AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 Pfam PF13354 Beta-lactamase enzyme family 53 261 7.0E-39 T 06-07-2017 AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 Gene3D G3DSA:3.40.710.10 31 287 1.1E-106 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 PRINTS PR00118 Beta-lactamase class A signature 141 165 4.3E-72 T 06-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 PRINTS PR00118 Beta-lactamase class A signature 32 56 4.3E-72 T 06-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 PRINTS PR00118 Beta-lactamase class A signature 105 130 4.3E-72 T 06-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 PRINTS PR00118 Beta-lactamase class A signature 63 80 4.3E-72 T 06-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 PRINTS PR00118 Beta-lactamase class A signature 203 218 4.3E-72 T 06-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 PRINTS PR00118 Beta-lactamase class A signature 167 192 4.3E-72 T 06-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 PRINTS PR00118 Beta-lactamase class A signature 220 235 4.3E-72 T 06-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AM402_RS21785 11f78dca4869b67304dc89c44a8dfc2e 293 SUPERFAMILY SSF56601 29 287 2.9E-76 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS18465 29e587be43493c140ac60a922b9f2453 236 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 221 1.6E-77 T 06-07-2017 IPR005224 Sugar fermentation stimulation protein AM402_RS18465 29e587be43493c140ac60a922b9f2453 236 Pfam PF03749 Sugar fermentation stimulation protein 13 223 2.6E-74 T 06-07-2017 IPR005224 Sugar fermentation stimulation protein AM402_RS18465 29e587be43493c140ac60a922b9f2453 236 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 55.247 T 06-07-2017 IPR005224 Sugar fermentation stimulation protein AM402_RS09600 f2ec52366f06ec0b03f3760fd0aee982 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 2.9E-84 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM402_RS09600 f2ec52366f06ec0b03f3760fd0aee982 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 47.06 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM402_RS09600 f2ec52366f06ec0b03f3760fd0aee982 193 SUPERFAMILY SSF160930 5 161 6.28E-64 T 06-07-2017 AM402_RS09600 f2ec52366f06ec0b03f3760fd0aee982 193 PIRSF PIRSF003159 1 181 5.6E-90 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM402_RS09600 f2ec52366f06ec0b03f3760fd0aee982 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 186 1.0E-107 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 3.7E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 3.7E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 3.7E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 3.7E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.7E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 Gene3D G3DSA:1.10.460.10 158 217 2.7E-53 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 Gene3D G3DSA:1.10.460.10 490 607 2.7E-53 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 SMART SM00436 128 223 6.3E-35 T 06-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 Gene3D G3DSA:3.40.50.140 1 153 3.3E-47 T 06-07-2017 IPR006171 Toprim domain AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 646 65.517 T 06-07-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 642 1.9E-277 T 06-07-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 SMART SM00437 280 558 2.7E-104 T 06-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 Pfam PF01131 DNA topoisomerase 158 592 2.5E-115 T 06-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 SUPERFAMILY SSF56712 1 607 1.16E-187 T 06-07-2017 IPR023405 DNA topoisomerase, type IA, core domain AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 SMART SM00493 1 124 1.1E-31 T 06-07-2017 IPR006171 Toprim domain AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 Gene3D G3DSA:2.70.20.10 369 488 5.0E-49 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 Gene3D G3DSA:2.70.20.10 218 252 5.0E-49 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 Pfam PF01751 Toprim domain 3 135 6.9E-18 T 06-07-2017 IPR006171 Toprim domain AM402_RS10835 007b4fa3ef851a660ec00ca42963b665 655 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 06-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM402_RS04335 a3a69ed3920028d898d26f3d318de17a 197 SUPERFAMILY SSF51161 3 167 4.57E-41 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS04335 a3a69ed3920028d898d26f3d318de17a 197 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 41 3.5E-6 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS04335 a3a69ed3920028d898d26f3d318de17a 197 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 2.3E-7 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS04335 a3a69ed3920028d898d26f3d318de17a 197 Hamap MF_01525 Carnitine operon protein CaiE [caiE]. 1 196 55.194 T 06-07-2017 IPR023446 Carnitine operon protein CaiE AM402_RS04335 a3a69ed3920028d898d26f3d318de17a 197 Gene3D G3DSA:2.160.10.10 2 167 9.3E-38 T 06-07-2017 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 Gene3D G3DSA:3.40.228.10 202 407 3.1E-60 T 06-07-2017 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 117 3.3E-7 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 SUPERFAMILY SSF50692 687 812 1.11E-36 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 15 812 0.0 T 06-07-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 Pfam PF01568 Molydopterin dinucleotide binding domain 693 804 6.7E-26 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 Gene3D G3DSA:2.40.40.20 667 812 2.0E-48 T 06-07-2017 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 Gene3D G3DSA:3.40.50.740 123 201 8.7E-66 T 06-07-2017 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 Gene3D G3DSA:3.40.50.740 408 651 8.7E-66 T 06-07-2017 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 SUPERFAMILY SSF53706 60 694 5.89E-156 T 06-07-2017 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 63 81 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 SMART SM00926 58 118 6.2E-7 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 Pfam PF00384 Molybdopterin oxidoreductase 121 572 8.0E-79 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09425 238970cf2ace102aa2286ba16a68d733 812 Gene3D G3DSA:2.20.25.90 57 122 5.7E-13 T 06-07-2017 AM402_RS08640 0f0e577f33bce4785998c93896588033 373 Pfam PF04551 GcpE protein 14 354 4.3E-132 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM402_RS08640 0f0e577f33bce4785998c93896588033 373 PIRSF PIRSF004640 1 363 3.6E-147 T 06-07-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM402_RS08640 0f0e577f33bce4785998c93896588033 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.942 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM402_RS08640 0f0e577f33bce4785998c93896588033 373 Gene3D G3DSA:3.20.20.70 30 132 4.5E-10 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS08640 0f0e577f33bce4785998c93896588033 373 SUPERFAMILY SSF51717 15 207 3.84E-10 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS08640 0f0e577f33bce4785998c93896588033 373 SUPERFAMILY SSF56014 265 353 3.05E-10 T 06-07-2017 AM402_RS08640 0f0e577f33bce4785998c93896588033 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 8.4E-127 T 06-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Gene3D G3DSA:1.10.1780.10 1 141 1.4E-42 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 SUPERFAMILY SSF81923 1 141 4.45E-57 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Gene3D G3DSA:3.40.50.300 446 668 2.4E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Gene3D G3DSA:1.10.8.60 669 759 3.8E-31 T 06-07-2017 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 8.4E-23 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Gene3D G3DSA:1.10.8.60 356 440 6.2E-30 T 06-07-2017 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Gene3D G3DSA:3.40.50.300 173 353 2.2E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 3.2E-36 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 3.2E-36 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 3.2E-36 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 3.2E-36 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 SMART SM00382 210 355 1.1E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 SMART SM00382 491 658 4.5E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 347 3.1E-13 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 SUPERFAMILY SSF52540 441 732 8.76E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 06-07-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 06-07-2017 IPR028299 ClpA/B, conserved site 2 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 4 738 0.0 T 06-07-2017 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 SMART SM01086 657 748 1.3E-33 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 649 2.3E-49 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 SUPERFAMILY SSF52540 173 431 2.86E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15540 b49f17a5e6bfb9ab1cc787dfaacddd3c 764 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.6E-14 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS01575 13ad65c3bd7c844ef85f265360e03711 345 Gene3D G3DSA:3.90.550.10 25 203 1.1E-32 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS01575 13ad65c3bd7c844ef85f265360e03711 345 SUPERFAMILY SSF53448 26 244 2.25E-35 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS01575 13ad65c3bd7c844ef85f265360e03711 345 Pfam PF00535 Glycosyl transferase family 2 27 193 8.6E-18 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM402_RS14200 de6db0a1c7d72c3238bb4149abc3a3f7 220 SUPERFAMILY SSF51306 149 218 3.14E-6 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS14200 de6db0a1c7d72c3238bb4149abc3a3f7 220 Gene3D G3DSA:1.10.260.40 27 93 8.9E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14200 de6db0a1c7d72c3238bb4149abc3a3f7 220 SUPERFAMILY SSF47413 20 92 1.78E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14200 de6db0a1c7d72c3238bb4149abc3a3f7 220 Gene3D G3DSA:2.10.109.10 148 219 1.9E-6 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS14200 de6db0a1c7d72c3238bb4149abc3a3f7 220 Pfam PF01381 Helix-turn-helix 32 86 1.4E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS14200 de6db0a1c7d72c3238bb4149abc3a3f7 220 SMART SM00530 31 86 1.1E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS03800 54f2a607b7f4ced1fae62dda58ed0233 367 SUPERFAMILY SSF56796 8 360 3.93E-83 T 06-07-2017 AM402_RS03800 54f2a607b7f4ced1fae62dda58ed0233 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 352 2.2E-62 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM402_RS03800 54f2a607b7f4ced1fae62dda58ed0233 367 Gene3D G3DSA:3.40.50.1970 7 163 3.9E-42 T 06-07-2017 AM402_RS03800 54f2a607b7f4ced1fae62dda58ed0233 367 Gene3D G3DSA:1.20.1090.10 164 366 5.9E-56 T 06-07-2017 AM402_RS03800 54f2a607b7f4ced1fae62dda58ed0233 367 PIRSF PIRSF000112 3 364 3.9E-85 T 06-07-2017 AM402_RS01110 f6801ab758b55422a5e56b22b5a228ba 365 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 3 365 43.245 T 06-07-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM402_RS01110 f6801ab758b55422a5e56b22b5a228ba 365 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 347 357 - T 06-07-2017 IPR030391 RNA methyltransferase TrmA, conserved site AM402_RS01110 f6801ab758b55422a5e56b22b5a228ba 365 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 6.4E-186 T 06-07-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM402_RS01110 f6801ab758b55422a5e56b22b5a228ba 365 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 2.1E-186 T 06-07-2017 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM402_RS01110 f6801ab758b55422a5e56b22b5a228ba 365 Gene3D G3DSA:3.40.50.150 157 363 1.0E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS01110 f6801ab758b55422a5e56b22b5a228ba 365 SUPERFAMILY SSF53335 5 364 3.93E-53 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS01110 f6801ab758b55422a5e56b22b5a228ba 365 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 298 327 - T 06-07-2017 IPR030390 RNA methyltransferase TrmA, active site AM402_RS01710 77061fd564f9d6258e8333229c4b9912 319 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 317 2.7E-127 T 06-07-2017 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 AM402_RS01710 77061fd564f9d6258e8333229c4b9912 319 Gene3D G3DSA:3.40.50.2000 169 313 1.6E-36 T 06-07-2017 AM402_RS01710 77061fd564f9d6258e8333229c4b9912 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 298 1.2E-70 T 06-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM402_RS01710 77061fd564f9d6258e8333229c4b9912 319 SUPERFAMILY SSF53756 2 317 7.85E-74 T 06-07-2017 AM402_RS01710 77061fd564f9d6258e8333229c4b9912 319 Gene3D G3DSA:3.40.50.2000 2 159 5.6E-32 T 06-07-2017 AM402_RS05295 734c9203953670c4fd1411708c1d014b 683 SUPERFAMILY SSF54211 504 671 8.72E-25 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS05295 734c9203953670c4fd1411708c1d014b 683 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 6 680 3.3E-245 T 06-07-2017 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue AM402_RS05295 734c9203953670c4fd1411708c1d014b 683 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 518 676 1.3E-14 T 06-07-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AM402_RS05295 734c9203953670c4fd1411708c1d014b 683 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 13 465 1.7E-159 T 06-07-2017 IPR014061 Conserved hypothetical protein CHP02688 AM402_RS05295 734c9203953670c4fd1411708c1d014b 683 Gene3D G3DSA:3.30.230.10 497 669 8.0E-23 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS05295 734c9203953670c4fd1411708c1d014b 683 Pfam PF13337 Putative ATP-dependent Lon protease 13 474 5.9E-185 T 06-07-2017 IPR014061 Conserved hypothetical protein CHP02688 AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 67 9.6E-36 T 06-07-2017 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 SMART SM00357 3 67 1.1E-23 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 1.2E-26 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 SUPERFAMILY SSF50249 1 63 1.71E-21 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 Gene3D G3DSA:2.40.50.140 1 62 1.7E-27 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 06-07-2017 IPR019844 Cold-shock conserved site AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 PIRSF PIRSF002599 1 68 4.3E-21 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 PRINTS PR00050 Cold shock protein signature 25 34 3.5E-15 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 PRINTS PR00050 Cold shock protein signature 40 58 3.5E-15 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS15550 65a619e8f8ab3c9332581c381efd6d55 69 PRINTS PR00050 Cold shock protein signature 4 19 3.5E-15 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS18635 9735b308bbda08ab9ad9dda7b36a4d12 217 Gene3D G3DSA:3.40.1050.10 2 212 2.8E-79 T 06-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM402_RS18635 9735b308bbda08ab9ad9dda7b36a4d12 217 SUPERFAMILY SSF53056 2 212 2.75E-77 T 06-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM402_RS18635 9735b308bbda08ab9ad9dda7b36a4d12 217 Pfam PF00484 Carbonic anhydrase 39 189 4.2E-51 T 06-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM402_RS18635 9735b308bbda08ab9ad9dda7b36a4d12 217 SMART SM00947 31 193 3.2E-69 T 06-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM402_RS18635 9735b308bbda08ab9ad9dda7b36a4d12 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 83 103 - T 06-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM402_RS18635 9735b308bbda08ab9ad9dda7b36a4d12 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 06-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM402_RS14335 f4bda06d9a21d8969b55386240095c77 339 SUPERFAMILY SSF51445 2 296 2.42E-83 T 06-07-2017 IPR017853 Glycoside hydrolase superfamily AM402_RS14335 f4bda06d9a21d8969b55386240095c77 339 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 333 48.146 T 06-07-2017 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AM402_RS14335 f4bda06d9a21d8969b55386240095c77 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 06-07-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM402_RS14335 f4bda06d9a21d8969b55386240095c77 339 Gene3D G3DSA:3.20.20.300 3 290 3.6E-94 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM402_RS14335 f4bda06d9a21d8969b55386240095c77 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 293 8.8E-95 T 06-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM402_RS13385 1b2984d9361be8b1cbe84e4e8341dcf4 65 SUPERFAMILY SSF143034 2 64 7.72E-23 T 06-07-2017 AM402_RS13385 1b2984d9361be8b1cbe84e4e8341dcf4 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.4E-26 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM402_RS13385 1b2984d9361be8b1cbe84e4e8341dcf4 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.9E-22 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM402_RS13385 1b2984d9361be8b1cbe84e4e8341dcf4 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.9E-22 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM402_RS13385 1b2984d9361be8b1cbe84e4e8341dcf4 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.9E-22 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM402_RS13385 1b2984d9361be8b1cbe84e4e8341dcf4 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.039 T 06-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM402_RS13385 1b2984d9361be8b1cbe84e4e8341dcf4 65 Pfam PF01632 Ribosomal protein L35 2 60 5.6E-23 T 06-07-2017 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS13385 1b2984d9361be8b1cbe84e4e8341dcf4 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 06-07-2017 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS15095 0c7a02d855778d8c7b40b195e136d5a1 336 PIRSF PIRSF000164 15 336 3.8E-96 T 06-07-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AM402_RS15095 0c7a02d855778d8c7b40b195e136d5a1 336 Gene3D G3DSA:3.20.20.70 1 335 1.4E-124 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS15095 0c7a02d855778d8c7b40b195e136d5a1 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.917 T 06-07-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS15095 0c7a02d855778d8c7b40b195e136d5a1 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 06-07-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM402_RS15095 0c7a02d855778d8c7b40b195e136d5a1 336 SUPERFAMILY SSF51395 1 334 9.16E-103 T 06-07-2017 AM402_RS15095 0c7a02d855778d8c7b40b195e136d5a1 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 3.8E-90 T 06-07-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM402_RS15095 0c7a02d855778d8c7b40b195e136d5a1 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 7.9E-156 T 06-07-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS15095 0c7a02d855778d8c7b40b195e136d5a1 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 06-07-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM402_RS14890 246431e033192c6a3c309a5bc1c11034 192 Pfam PF06821 Serine hydrolase 6 183 9.2E-25 T 06-07-2017 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 AM402_RS14890 246431e033192c6a3c309a5bc1c11034 192 SUPERFAMILY SSF53474 3 177 4.85E-31 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS14890 246431e033192c6a3c309a5bc1c11034 192 Gene3D G3DSA:3.40.50.1820 4 188 1.2E-56 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12740 7b03ed7a994d2e2b2be654be30014409 209 SUPERFAMILY SSF54862 13 200 3.14E-66 T 06-07-2017 AM402_RS12740 7b03ed7a994d2e2b2be654be30014409 209 Gene3D G3DSA:3.30.70.20 84 113 2.9E-11 T 06-07-2017 AM402_RS12740 7b03ed7a994d2e2b2be654be30014409 209 Gene3D G3DSA:3.30.70.20 152 195 8.0E-31 T 06-07-2017 AM402_RS12740 7b03ed7a994d2e2b2be654be30014409 209 Gene3D G3DSA:3.30.70.20 14 83 8.0E-31 T 06-07-2017 AM402_RS12740 7b03ed7a994d2e2b2be654be30014409 209 Gene3D G3DSA:3.30.70.20 114 151 1.2E-16 T 06-07-2017 AM402_RS12740 7b03ed7a994d2e2b2be654be30014409 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 14 175 2.4E-79 T 06-07-2017 IPR014297 Dimethylsulphoxide reductase, chain B AM402_RS12740 7b03ed7a994d2e2b2be654be30014409 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS12740 7b03ed7a994d2e2b2be654be30014409 209 Pfam PF13247 4Fe-4S dicluster domain 74 166 1.5E-25 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS03585 ca33a51bbcf10f0e59d6aedfa07ee35c 67 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 59 2.1E-20 T 06-07-2017 IPR012658 Conserved hypothetical protein CHP02443 AM402_RS03585 ca33a51bbcf10f0e59d6aedfa07ee35c 67 Gene3D G3DSA:3.30.50.10 10 45 2.0E-4 T 06-07-2017 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AM402_RS03585 ca33a51bbcf10f0e59d6aedfa07ee35c 67 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 61 2.8E-29 T 06-07-2017 IPR012658 Conserved hypothetical protein CHP02443 AM402_RS18940 0f484968fe2f9001f45b194f55eb630c 307 SUPERFAMILY SSF51735 2 172 3.85E-53 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18940 0f484968fe2f9001f45b194f55eb630c 307 Gene3D G3DSA:1.10.1040.10 180 295 7.1E-37 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS18940 0f484968fe2f9001f45b194f55eb630c 307 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 297 6.0E-69 T 06-07-2017 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AM402_RS18940 0f484968fe2f9001f45b194f55eb630c 307 Gene3D G3DSA:3.40.50.720 2 179 1.2E-42 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18940 0f484968fe2f9001f45b194f55eb630c 307 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 173 295 6.3E-32 T 06-07-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AM402_RS18940 0f484968fe2f9001f45b194f55eb630c 307 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 148 6.2E-24 T 06-07-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AM402_RS18940 0f484968fe2f9001f45b194f55eb630c 307 SUPERFAMILY SSF48179 173 295 3.4E-32 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 Gene3D G3DSA:3.10.430.100 61 149 1.9E-26 T 06-07-2017 IPR020069 Ribosomal protein L9, C-terminal AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 SUPERFAMILY SSF55653 60 149 1.44E-24 T 06-07-2017 IPR020069 Ribosomal protein L9, C-terminal AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.25 T 06-07-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 SUPERFAMILY SSF55658 1 57 4.53E-19 T 06-07-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 6.0E-58 T 06-07-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 8.1E-22 T 06-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 Gene3D G3DSA:3.40.5.10 1 52 6.5E-25 T 06-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 06-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00340 253a12b278205c9557f4d4d72e15b4bf 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 9.8E-24 T 06-07-2017 IPR020069 Ribosomal protein L9, C-terminal AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 Pfam PF00384 Molybdopterin oxidoreductase 120 566 1.6E-71 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 Gene3D G3DSA:2.40.40.20 655 798 1.3E-49 T 06-07-2017 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 SUPERFAMILY SSF50692 669 798 4.52E-38 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 SMART SM00926 58 117 3.1E-7 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 18 798 0.0 T 06-07-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 509 526 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 Gene3D G3DSA:3.40.50.740 122 201 6.2E-62 T 06-07-2017 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 Gene3D G3DSA:3.40.50.740 403 645 6.2E-62 T 06-07-2017 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 Pfam PF01568 Molydopterin dinucleotide binding domain 679 787 2.5E-23 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 SUPERFAMILY SSF53706 60 680 6.94E-162 T 06-07-2017 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 Gene3D G3DSA:3.40.228.10 203 402 1.1E-60 T 06-07-2017 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 Gene3D G3DSA:2.20.25.90 58 121 9.2E-13 T 06-07-2017 AM402_RS12745 b07e074132ea58d22790c2194314fe8c 798 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 59 117 1.2E-6 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS13690 beb69605d01ced78540eb287faf5b8f4 374 Pfam PF03583 Secretory lipase 111 200 8.1E-12 T 06-07-2017 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 AM402_RS13690 beb69605d01ced78540eb287faf5b8f4 374 SUPERFAMILY SSF53474 288 352 3.27E-24 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS13690 beb69605d01ced78540eb287faf5b8f4 374 SUPERFAMILY SSF53474 65 206 3.27E-24 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS13690 beb69605d01ced78540eb287faf5b8f4 374 PIRSF PIRSF029171 6 374 3.2E-93 T 06-07-2017 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 AM402_RS13690 beb69605d01ced78540eb287faf5b8f4 374 Gene3D G3DSA:3.40.50.1820 274 352 1.0E-16 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS13690 beb69605d01ced78540eb287faf5b8f4 374 Gene3D G3DSA:3.40.50.1820 65 234 1.0E-16 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS11635 cd0ae14048a60639d4e0fb971b0dd771 162 Pfam PF02661 Fic/DOC family 14 97 1.4E-9 T 06-07-2017 IPR003812 Fido domain AM402_RS11635 cd0ae14048a60639d4e0fb971b0dd771 162 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 15 133 6.6E-40 T 06-07-2017 IPR006440 Death on curing protein GO:0016301 AM402_RS16425 cd0ae14048a60639d4e0fb971b0dd771 162 Pfam PF02661 Fic/DOC family 14 97 1.4E-9 T 06-07-2017 IPR003812 Fido domain AM402_RS16425 cd0ae14048a60639d4e0fb971b0dd771 162 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 15 133 6.6E-40 T 06-07-2017 IPR006440 Death on curing protein GO:0016301 AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 PRINTS PR00969 Pili chaperone signature 106 123 3.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 PRINTS PR00969 Pili chaperone signature 165 180 3.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 PRINTS PR00969 Pili chaperone signature 129 144 3.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 PRINTS PR00969 Pili chaperone signature 76 97 3.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 PRINTS PR00969 Pili chaperone signature 29 38 3.0E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 Gene3D G3DSA:2.60.40.1070 152 240 2.2E-24 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 147 7.4E-35 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 Gene3D G3DSA:2.60.40.360 29 147 2.4E-43 T 06-07-2017 IPR008962 PapD-like AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 170 227 3.1E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 SUPERFAMILY SSF49584 154 241 9.81E-21 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 SUPERFAMILY SSF49354 29 148 6.8E-38 T 06-07-2017 IPR008962 PapD-like AM402_RS17990 bf96329f5789b3dcebfc630ed9cd2c42 245 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS05935 07b459a2de83732dc3926d1b6b749795 465 Pfam PF02321 Outer membrane efflux protein 232 425 1.4E-33 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM402_RS05935 07b459a2de83732dc3926d1b6b749795 465 Pfam PF02321 Outer membrane efflux protein 25 209 7.1E-26 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM402_RS05935 07b459a2de83732dc3926d1b6b749795 465 SUPERFAMILY SSF56954 24 443 1.57E-90 T 06-07-2017 AM402_RS05935 07b459a2de83732dc3926d1b6b749795 465 Gene3D G3DSA:1.20.1600.10 12 435 1.6E-86 T 06-07-2017 AM402_RS05935 07b459a2de83732dc3926d1b6b749795 465 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 441 1.2E-123 T 06-07-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 ProSitePatterns PS01071 grpE protein signature. 158 201 - T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 Hamap MF_01151 Protein GrpE [grpE]. 4 203 22.152 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 SUPERFAMILY SSF58014 53 147 1.09E-27 T 06-07-2017 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 Pfam PF01025 GrpE 37 203 1.8E-47 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 PRINTS PR00773 GrpE protein signature 72 88 1.6E-26 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 PRINTS PR00773 GrpE protein signature 100 115 1.6E-26 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 PRINTS PR00773 GrpE protein signature 155 170 1.6E-26 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 PRINTS PR00773 GrpE protein signature 182 201 1.6E-26 T 06-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 SUPERFAMILY SSF51064 148 203 2.75E-18 T 06-07-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 Gene3D G3DSA:2.30.22.10 147 203 1.1E-24 T 06-07-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM402_RS08355 8fd915310b37a61230ccdcbad43ac47d 203 Gene3D G3DSA:3.90.20.20 50 146 1.5E-30 T 06-07-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 SMART SM00342 22 104 1.2E-17 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 SUPERFAMILY SSF46767 191 272 1.2E-29 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 119 189 4.4E-7 T 06-07-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 Pfam PF12833 Helix-turn-helix domain 28 105 1.1E-16 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 Gene3D G3DSA:1.10.10.60 60 103 3.4E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 SUPERFAMILY SSF53155 111 189 1.96E-19 T 06-07-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 Gene3D G3DSA:1.10.10.60 4 59 1.1E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 Gene3D G3DSA:3.30.160.70 104 190 2.2E-33 T 06-07-2017 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 192 271 2.3E-34 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 194 272 3.2E-32 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 242 248 - T 06-07-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 SUPERFAMILY SSF46689 6 55 2.07E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12520 9cad0fc260f2f18598c398da6460481a 287 Gene3D G3DSA:1.10.10.10 191 274 2.9E-33 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 SUPERFAMILY SSF47170 28 167 9.42E-5 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 SMART SM00283 260 507 1.0E-77 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 Gene3D G3DSA:1.10.287.950 275 479 8.5E-56 T 06-07-2017 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 Pfam PF00672 HAMP domain 188 254 1.3E-6 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 313 506 2.2E-56 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 SMART SM00304 207 259 2.7E-5 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 SUPERFAMILY SSF58104 227 508 2.35E-71 T 06-07-2017 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 1.4E-54 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 1.4E-54 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 1.4E-54 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.4E-54 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS12880 39cef2fbf36507b6da4e7a7f35f8ae28 517 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 1.4E-54 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS08825 534d27f04ef2791449fd6ef19e1407c4 100 SUPERFAMILY SSF47413 4 83 1.29E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS08825 534d27f04ef2791449fd6ef19e1407c4 100 Gene3D G3DSA:1.10.260.40 8 72 1.1E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS08825 534d27f04ef2791449fd6ef19e1407c4 100 Pfam PF01381 Helix-turn-helix 15 66 1.7E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS08825 534d27f04ef2791449fd6ef19e1407c4 100 SMART SM00530 14 69 1.4E-9 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 Gene3D G3DSA:3.40.50.140 1 148 3.3E-45 T 06-07-2017 IPR006171 Toprim domain AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 Pfam PF01751 Toprim domain 3 130 1.5E-18 T 06-07-2017 IPR006171 Toprim domain AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 1.2E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 1.2E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.2E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 525 539 1.2E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 188 206 1.2E-26 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 SMART SM00437 272 562 2.6E-63 T 06-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 Gene3D G3DSA:1.10.460.10 153 212 1.5E-52 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 Gene3D G3DSA:1.10.460.10 494 608 1.5E-52 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 SMART SM00493 1 123 8.2E-21 T 06-07-2017 IPR006171 Toprim domain AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 324 - T 06-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 SUPERFAMILY SSF56712 1 608 6.54E-179 T 06-07-2017 IPR023405 DNA topoisomerase, type IA, core domain AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 Pfam PF01131 DNA topoisomerase 150 596 1.7E-116 T 06-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 SMART SM00436 123 218 2.7E-35 T 06-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 656 5.9E-239 T 06-07-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 SUPERFAMILY SSF57783 623 657 1.11E-7 T 06-07-2017 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 624 659 3.5E-11 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 Gene3D G3DSA:3.30.65.10 624 657 1.3E-8 T 06-07-2017 AM402_RS04540 ea93ce4be0c48b85efbff867a7ead7e4 684 Gene3D G3DSA:1.10.290.10 282 409 5.4E-36 T 06-07-2017 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 SUPERFAMILY SSF53720 6 453 2.09E-80 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 Gene3D G3DSA:3.40.309.10 309 404 1.7E-27 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 Gene3D G3DSA:3.40.309.10 226 273 1.7E-27 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 Gene3D G3DSA:3.40.605.10 3 225 2.0E-24 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 Gene3D G3DSA:1.20.1090.10 644 864 1.1E-68 T 06-07-2017 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 Pfam PF00171 Aldehyde dehydrogenase family 6 280 4.6E-26 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 SUPERFAMILY SSF56796 449 867 3.01E-119 T 06-07-2017 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 1.2E-114 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 Gene3D G3DSA:3.40.50.1970 450 643 3.8E-64 T 06-07-2017 AM402_RS10890 7f55b588676721dc5e89cd1b7f6e2d58 887 PIRSF PIRSF000111 1 866 0.0 T 06-07-2017 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 AM402_RS16250 71de5d6730d9992c1aa332e23b6e9252 94 SMART SM00530 34 88 2.9E-5 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS16250 71de5d6730d9992c1aa332e23b6e9252 94 SUPERFAMILY SSF47413 35 83 3.49E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS16250 71de5d6730d9992c1aa332e23b6e9252 94 Pfam PF01381 Helix-turn-helix 35 81 4.4E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS16250 71de5d6730d9992c1aa332e23b6e9252 94 Gene3D G3DSA:1.10.260.40 34 85 8.3E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 Pfam PF01336 OB-fold nucleic acid binding domain 994 1072 3.5E-8 T 06-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 Gene3D G3DSA:1.10.150.280 836 882 2.2E-6 T 06-07-2017 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 06-07-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 Gene3D G3DSA:2.40.50.140 982 1078 7.1E-11 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 Pfam PF02811 PHP domain 8 172 4.0E-40 T 06-07-2017 IPR004013 PHP domain GO:0003824 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 Gene3D G3DSA:3.20.20.140 6 257 2.0E-20 T 06-07-2017 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 4.9E-176 T 06-07-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 3.5E-26 T 06-07-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 SUPERFAMILY SSF89550 6 263 5.69E-16 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM402_RS06320 17a41c0fd83b3a482f7652a5f7863801 1160 SMART SM00481 7 74 4.1E-26 T 06-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 7.7E-11 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.7E-11 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 7.7E-11 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.3E-42 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.3E-42 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.3E-42 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.3E-42 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.3E-42 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.3E-42 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 1.3E-69 T 06-07-2017 AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 SUPERFAMILY SSF51735 5 249 2.07E-83 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 Gene3D G3DSA:3.40.50.720 4 249 5.9E-84 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 0.001 T 06-07-2017 AM402_RS08770 d00a6ba117cacf02d3a859de2428bebb 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS08395 1b693a9672473251d9794bfc2a852952 323 Pfam PF03888 MucB/RseB N-terminal domain 30 203 4.1E-52 T 06-07-2017 IPR033434 MucB/RseB, N-terminal AM402_RS08395 1b693a9672473251d9794bfc2a852952 323 Pfam PF17188 MucB/RseB C-terminal domain 223 318 1.3E-24 T 06-07-2017 IPR033436 MucB/RseB, C-terminal AM402_RS08395 1b693a9672473251d9794bfc2a852952 323 PIRSF PIRSF005427 2 323 1.7E-71 T 06-07-2017 IPR005588 MucB/RseB AM402_RS08395 1b693a9672473251d9794bfc2a852952 323 Gene3D G3DSA:2.50.20.10 129 194 6.9E-4 T 06-07-2017 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 06-07-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 Pfam PF00871 Acetokinase family 6 393 1.1E-175 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 06-07-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 Gene3D G3DSA:3.30.420.40 208 398 1.3E-73 T 06-07-2017 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 PRINTS PR00471 Acetate kinase family signature 6 17 6.0E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 PRINTS PR00471 Acetate kinase family signature 325 341 6.0E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 PRINTS PR00471 Acetate kinase family signature 302 315 6.0E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 PRINTS PR00471 Acetate kinase family signature 176 189 6.0E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 PRINTS PR00471 Acetate kinase family signature 206 227 6.0E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 PRINTS PR00471 Acetate kinase family signature 380 392 6.0E-47 T 06-07-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 SUPERFAMILY SSF53067 4 199 1.81E-64 T 06-07-2017 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 PIRSF PIRSF000722 2 400 9.3E-146 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 188.147 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 3.7E-183 T 06-07-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 Gene3D G3DSA:3.30.420.40 5 207 3.1E-11 T 06-07-2017 AM402_RS09070 3f4ba1008079394046d54745cf18bb17 400 SUPERFAMILY SSF53067 159 398 3.33E-84 T 06-07-2017 AM402_RS18715 d959bb7528c4cbfb2fac61c8e54cfe6a 440 Pfam PF03313 Serine dehydratase alpha chain 178 429 2.5E-46 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit AM402_RS18715 d959bb7528c4cbfb2fac61c8e54cfe6a 440 PIRSF PIRSF006054 4 436 3.9E-167 T 06-07-2017 IPR021144 Uncharacterised protein family UPF0597 AM402_RS18715 d959bb7528c4cbfb2fac61c8e54cfe6a 440 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 8 434 34.875 T 06-07-2017 IPR021144 Uncharacterised protein family UPF0597 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 Gene3D G3DSA:3.40.220.10 1 161 3.2E-65 T 06-07-2017 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 SUPERFAMILY SSF53187 179 496 6.91E-125 T 06-07-2017 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 488 4.9E-119 T 06-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.602 T 06-07-2017 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 06-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 3.8E-32 T 06-07-2017 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 Gene3D G3DSA:3.40.630.10 171 495 5.0E-137 T 06-07-2017 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 9.8E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 9.8E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 9.8E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 9.8E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 9.8E-54 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS20510 ce45bca2fc9d62d340700108b9a86a76 502 SUPERFAMILY SSF52949 1 184 6.47E-50 T 06-07-2017 AM402_RS09645 594517e2cfd4f441808324a0c14aec74 129 SMART SM00448 6 120 2.5E-35 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09645 594517e2cfd4f441808324a0c14aec74 129 SUPERFAMILY SSF52172 5 125 1.22E-36 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS09645 594517e2cfd4f441808324a0c14aec74 129 Pfam PF00072 Response regulator receiver domain 9 120 8.9E-33 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09645 594517e2cfd4f441808324a0c14aec74 129 Gene3D G3DSA:3.40.50.2300 4 126 7.6E-39 T 06-07-2017 AM402_RS17310 1efe9b1a204710728f6fae06a4e4923f 243 Gene3D G3DSA:2.40.240.20 1 71 2.8E-26 T 06-07-2017 AM402_RS17310 1efe9b1a204710728f6fae06a4e4923f 243 SUPERFAMILY SSF75217 75 242 9.42E-52 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases AM402_RS17310 1efe9b1a204710728f6fae06a4e4923f 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.1E-86 T 06-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS17310 1efe9b1a204710728f6fae06a4e4923f 243 PIRSF PIRSF015601 2 242 4.8E-53 T 06-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS17310 1efe9b1a204710728f6fae06a4e4923f 243 Pfam PF04452 RNA methyltransferase 20 236 5.9E-72 T 06-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS17310 1efe9b1a204710728f6fae06a4e4923f 243 Gene3D G3DSA:3.40.1280.10 75 242 1.2E-58 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM402_RS17310 1efe9b1a204710728f6fae06a4e4923f 243 SUPERFAMILY SSF88697 2 69 3.98E-16 T 06-07-2017 IPR015947 PUA-like domain AM402_RS09475 2f32aa1b4bd0778a442d087e439e20d5 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 341 3.5E-74 T 06-07-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM402_RS09475 2f32aa1b4bd0778a442d087e439e20d5 363 SUPERFAMILY SSF51395 1 356 4.28E-116 T 06-07-2017 AM402_RS09475 2f32aa1b4bd0778a442d087e439e20d5 363 Gene3D G3DSA:3.20.20.70 1 357 4.9E-127 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 5.1E-111 T 06-07-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 74 2.7E-7 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 PIRSF PIRSF004491 1 313 1.3E-108 T 06-07-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 SUPERFAMILY SSF52374 15 175 1.41E-35 T 06-07-2017 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 Gene3D G3DSA:2.40.30.30 181 309 1.7E-40 T 06-07-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 SUPERFAMILY SSF82114 174 307 5.45E-44 T 06-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 Pfam PF01687 Riboflavin kinase 184 307 4.1E-38 T 06-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 Pfam PF06574 FAD synthetase 12 167 1.7E-60 T 06-07-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 SMART SM00904 183 308 2.3E-60 T 06-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM402_RS19340 b0db50620fa98d5771f57269171cd88b 313 Gene3D G3DSA:3.40.50.620 1 180 1.8E-69 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.4E-70 T 06-07-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 06-07-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 Gene3D G3DSA:3.30.230.10 76 159 7.0E-34 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 SUPERFAMILY SSF54768 9 75 1.57E-23 T 06-07-2017 AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 Gene3D G3DSA:3.30.160.20 10 71 3.6E-30 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.509 T 06-07-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 SUPERFAMILY SSF54211 79 159 6.07E-27 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 6.0E-29 T 06-07-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS00920 5b094b0203296d3f16b9a966990c06a3 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 3.0E-30 T 06-07-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 Pfam PF01547 Bacterial extracellular solute-binding protein 346 638 3.8E-9 T 06-07-2017 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 SMART SM00354 1 71 4.1E-22 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 Gene3D G3DSA:3.40.190.10 458 646 8.2E-21 T 06-07-2017 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 SUPERFAMILY SSF53850 336 724 1.09E-28 T 06-07-2017 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 Gene3D G3DSA:1.10.260.40 2 53 8.4E-21 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.9E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.9E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.4E-15 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 SUPERFAMILY SSF47413 1 59 1.83E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 Gene3D G3DSA:3.40.50.2300 54 188 3.2E-4 T 06-07-2017 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 Gene3D G3DSA:3.40.190.10 342 457 1.2E-9 T 06-07-2017 AM402_RS02805 3396991f579942a7b1b9841fa93cb25c 733 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:3.40.50.980 702 858 1.8E-40 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF52777 101 271 2.33E-19 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF52777 278 523 3.11E-35 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Pfam PF00550 Phosphopantetheine attachment site 1395 1454 7.9E-7 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Pfam PF00550 Phosphopantetheine attachment site 1939 2002 4.5E-10 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Pfam PF00550 Phosphopantetheine attachment site 10 70 2.3E-4 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Pfam PF00668 Condensation domain 1478 1759 9.7E-46 T 06-07-2017 IPR001242 Condensation domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Pfam PF00668 Condensation domain 96 391 4.2E-47 T 06-07-2017 IPR001242 Condensation domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:3.40.50.980 561 701 5.7E-35 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:3.40.50.150 1121 1282 1.5E-11 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 ProSitePatterns PS00455 Putative AMP-binding domain signature. 695 706 - T 06-07-2017 IPR020845 AMP-binding, conserved site AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF53335 1104 1271 1.55E-13 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 576 975 2.3E-115 T 06-07-2017 IPR010071 Amino acid adenylation domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Pfam PF08415 Nonribosomal peptide synthase 1787 1844 9.9E-14 T 06-07-2017 IPR013624 Non-ribosomal peptide synthetase AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Pfam PF08415 Nonribosomal peptide synthase 414 469 1.8E-12 T 06-07-2017 IPR013624 Non-ribosomal peptide synthetase AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:1.10.1200.10 1929 2006 2.6E-13 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:1.10.1200.10 10 75 4.3E-6 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:1.10.1200.10 1398 1459 1.4E-15 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:2.30.38.10 866 942 7.7E-24 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:3.30.300.30 1332 1397 4.3E-27 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Gene3D G3DSA:3.30.300.30 948 1003 4.3E-27 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF52777 1652 1899 4.22E-40 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF47336 1935 2003 2.88E-9 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF47336 9 74 8.24E-6 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 Pfam PF00501 AMP-binding enzyme 561 951 8.7E-88 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF47336 1386 1456 3.8E-13 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF52777 1476 1664 2.78E-20 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF56801 553 1006 1.83E-126 T 06-07-2017 AM402_RS04685 36b0b65f9f357568a83c858a1789748a 2034 SUPERFAMILY SSF56801 1327 1404 1.83E-126 T 06-07-2017 AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 Gene3D G3DSA:2.60.40.360 20 138 2.1E-45 T 06-07-2017 IPR008962 PapD-like AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 93 110 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 161 216 2.2E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 SUPERFAMILY SSF49584 132 220 3.92E-21 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 138 1.2E-40 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 PRINTS PR00969 Pili chaperone signature 155 170 4.5E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 PRINTS PR00969 Pili chaperone signature 120 135 4.5E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 PRINTS PR00969 Pili chaperone signature 21 30 4.5E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 PRINTS PR00969 Pili chaperone signature 66 87 4.5E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 PRINTS PR00969 Pili chaperone signature 94 111 4.5E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 SUPERFAMILY SSF49354 20 138 2.88E-41 T 06-07-2017 IPR008962 PapD-like AM402_RS03985 195ccc3b1b2003694e4f81979b0e2013 225 Gene3D G3DSA:2.60.40.1070 143 218 1.7E-20 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS03460 91488519c08876ba91c0e14efb59db48 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 6 187 2.2E-66 T 06-07-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM402_RS03460 91488519c08876ba91c0e14efb59db48 194 Pfam PF12804 MobA-like NTP transferase domain 10 158 1.5E-32 T 06-07-2017 IPR025877 MobA-like NTP transferase AM402_RS03460 91488519c08876ba91c0e14efb59db48 194 SUPERFAMILY SSF53448 6 185 5.83E-30 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS03460 91488519c08876ba91c0e14efb59db48 194 Gene3D G3DSA:3.90.550.10 2 192 1.2E-55 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS03460 91488519c08876ba91c0e14efb59db48 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 189 28.434 T 06-07-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 Hamap MF_00900 GTPase HflX [hflX]. 27 391 46.673 T 06-07-2017 IPR016496 GTPase HflX GO:0005525 AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 PIRSF PIRSF006809 5 420 1.9E-146 T 06-07-2017 IPR016496 GTPase HflX GO:0005525 AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 Gene3D G3DSA:3.40.50.300 197 361 3.4E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 SUPERFAMILY SSF54980 366 422 7.91E-13 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 9.3E-31 T 06-07-2017 IPR025121 GTPase HflX, N-terminal AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.7E-8 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.7E-8 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.7E-8 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 Pfam PF01926 50S ribosome-binding GTPase 201 318 2.7E-20 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 SUPERFAMILY SSF52540 197 372 1.2E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 361 9.3E-153 T 06-07-2017 IPR016496 GTPase HflX GO:0005525 AM402_RS00390 75319655ce8c7cf948eb45fba8e73294 427 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.5E-27 T 06-07-2017 IPR032305 GTP-binding protein, middle domain AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 237 5.5E-15 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 SUPERFAMILY SSF109998 248 430 5.36E-46 T 06-07-2017 IPR027304 Trigger factor/SurA domain AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 Hamap MF_00303 Trigger factor [tig]. 1 418 22.331 T 06-07-2017 IPR005215 Trigger factor GO:0015031 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 SUPERFAMILY SSF54534 89 241 9.04E-39 T 06-07-2017 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 Gene3D G3DSA:3.10.50.40 151 215 8.8E-10 T 06-07-2017 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 Gene3D G3DSA:3.30.70.1050 1 118 2.0E-42 T 06-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 PIRSF PIRSF003095 1 432 1.9E-129 T 06-07-2017 IPR005215 Trigger factor GO:0015031 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 1.5E-145 T 06-07-2017 IPR005215 Trigger factor GO:0015031 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 Gene3D G3DSA:1.10.3120.10 216 388 6.9E-62 T 06-07-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 SUPERFAMILY SSF102735 1 129 1.57E-41 T 06-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 4.8E-45 T 06-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM402_RS18875 b77a03c875ea4307999f46eb6a4e0ff8 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.0E-38 T 06-07-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 394 1.1E-7 T 06-07-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.2E-26 T 06-07-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.443 T 06-07-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 06-07-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 SUPERFAMILY SSF64484 16 944 0.0 T 06-07-2017 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 SUPERFAMILY SSF64484 1133 1365 0.0 T 06-07-2017 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 SMART SM00663 235 514 1.0E-182 T 06-07-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 2.3E-76 T 06-07-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Gene3D G3DSA:2.40.50.100 1156 1211 1.9E-5 T 06-07-2017 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Gene3D G3DSA:2.40.40.20 349 376 6.4E-37 T 06-07-2017 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Gene3D G3DSA:2.40.40.20 417 489 6.4E-37 T 06-07-2017 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 601 32.173 T 06-07-2017 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 3.6E-25 T 06-07-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.6E-18 T 06-07-2017 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03685 98383d7a533cc507e6858152344f4005 1409 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.5E-89 T 06-07-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS11195 d2cc898c4474a030b7255d2d49594b43 744 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 155 1.7E-15 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS11195 d2cc898c4474a030b7255d2d49594b43 744 Pfam PF00593 TonB dependent receptor 460 743 1.1E-17 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS11195 d2cc898c4474a030b7255d2d49594b43 744 Gene3D G3DSA:2.40.170.20 174 744 3.1E-52 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS11195 d2cc898c4474a030b7255d2d49594b43 744 SUPERFAMILY SSF56935 448 557 1.43E-72 T 06-07-2017 AM402_RS11195 d2cc898c4474a030b7255d2d49594b43 744 SUPERFAMILY SSF56935 47 419 1.43E-72 T 06-07-2017 AM402_RS11195 d2cc898c4474a030b7255d2d49594b43 744 SUPERFAMILY SSF56935 584 744 1.43E-72 T 06-07-2017 AM402_RS11195 d2cc898c4474a030b7255d2d49594b43 744 Gene3D G3DSA:2.170.130.10 57 167 3.8E-23 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS11195 d2cc898c4474a030b7255d2d49594b43 744 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 40 744 5.2E-107 T 06-07-2017 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM402_RS17095 87d72b63597869254c4e9e320867f329 424 Gene3D G3DSA:3.10.580.10 191 318 2.7E-13 T 06-07-2017 AM402_RS17095 87d72b63597869254c4e9e320867f329 424 SUPERFAMILY SSF56176 340 421 3.0E-22 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM402_RS17095 87d72b63597869254c4e9e320867f329 424 SMART SM01091 342 420 1.1E-26 T 06-07-2017 IPR005170 Transporter-associated domain AM402_RS17095 87d72b63597869254c4e9e320867f329 424 Gene3D G3DSA:3.30.465.10 319 418 5.5E-26 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM402_RS17095 87d72b63597869254c4e9e320867f329 424 Pfam PF03471 Transporter associated domain 344 418 7.3E-20 T 06-07-2017 IPR005170 Transporter-associated domain AM402_RS17095 87d72b63597869254c4e9e320867f329 424 SUPERFAMILY SSF54631 192 329 1.77E-23 T 06-07-2017 AM402_RS17095 87d72b63597869254c4e9e320867f329 424 Pfam PF01595 Domain of unknown function DUF21 11 184 1.0E-48 T 06-07-2017 IPR002550 Domain of unknown function DUF21 AM402_RS18825 9c14074e5bccae63df445efac40fa367 581 Pfam PF00005 ABC transporter 352 500 4.1E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS18825 9c14074e5bccae63df445efac40fa367 581 Gene3D G3DSA:1.20.1560.10 7 319 1.5E-67 T 06-07-2017 AM402_RS18825 9c14074e5bccae63df445efac40fa367 581 SUPERFAMILY SSF52540 327 572 1.92E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18825 9c14074e5bccae63df445efac40fa367 581 Gene3D G3DSA:3.40.50.300 341 564 1.1E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18825 9c14074e5bccae63df445efac40fa367 581 Pfam PF00664 ABC transporter transmembrane region 21 291 1.3E-39 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS18825 9c14074e5bccae63df445efac40fa367 581 SUPERFAMILY SSF90123 7 319 8.89E-70 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS18825 9c14074e5bccae63df445efac40fa367 581 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS18825 9c14074e5bccae63df445efac40fa367 581 SMART SM00382 361 547 1.3E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Gene3D G3DSA:3.30.930.10 496 690 1.2E-68 T 06-07-2017 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 SMART SM00873 212 385 1.3E-95 T 06-07-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 SUPERFAMILY SSF55681 467 690 2.93E-56 T 06-07-2017 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 SUPERFAMILY SSF46955 405 475 7.05E-22 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 6.2E-289 T 06-07-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 SUPERFAMILY SSF50249 35 195 1.44E-50 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Pfam PF03483 B3/4 domain 212 385 5.9E-69 T 06-07-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 SUPERFAMILY SSF56037 196 395 1.15E-75 T 06-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 SMART SM00874 403 471 2.3E-32 T 06-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 SUPERFAMILY SSF54991 696 794 7.98E-30 T 06-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 47.621 T 06-07-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.3E-28 T 06-07-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Gene3D G3DSA:3.30.56.20 404 475 1.1E-27 T 06-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Gene3D G3DSA:3.30.70.380 703 794 2.1E-29 T 06-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Gene3D G3DSA:3.50.40.10 198 392 6.5E-84 T 06-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 SMART SM00896 701 794 1.4E-43 T 06-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.4E-20 T 06-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Gene3D G3DSA:3.30.56.10 1 38 1.7E-29 T 06-07-2017 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Gene3D G3DSA:3.30.56.10 155 184 1.7E-29 T 06-07-2017 AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Gene3D G3DSA:2.40.50.140 41 154 9.4E-46 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13370 31f20ab418c0bd5d782b1ac998504b0c 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 2.2E-26 T 06-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AM402_RS10030 506556dd482505740f7dc6026fd96867 349 Pfam PF01791 DeoC/LacD family aldolase 69 325 3.9E-71 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 AM402_RS10030 506556dd482505740f7dc6026fd96867 349 SMART SM01133 68 325 1.7E-41 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 AM402_RS10030 506556dd482505740f7dc6026fd96867 349 SUPERFAMILY SSF51569 270 343 2.2E-66 T 06-07-2017 AM402_RS10030 506556dd482505740f7dc6026fd96867 349 SUPERFAMILY SSF51569 56 242 2.2E-66 T 06-07-2017 AM402_RS10030 506556dd482505740f7dc6026fd96867 349 Gene3D G3DSA:3.20.20.70 53 344 1.1E-100 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS15595 a2f35719e6bfc1a247b81d8b2875e5b0 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 1.2E-12 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS15595 a2f35719e6bfc1a247b81d8b2875e5b0 222 SUPERFAMILY SSF161098 8 201 8.76E-29 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS15595 a2f35719e6bfc1a247b81d8b2875e5b0 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 107 1.1E-11 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM402_RS15595 a2f35719e6bfc1a247b81d8b2875e5b0 222 Gene3D G3DSA:1.10.3720.10 7 214 1.4E-35 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS01245 b717a20a69c8235e0047ce137961fd56 176 Gene3D G3DSA:3.60.20.10 2 173 1.7E-85 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS01245 b717a20a69c8235e0047ce137961fd56 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.516 T 06-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM402_RS01245 b717a20a69c8235e0047ce137961fd56 176 Pfam PF00227 Proteasome subunit 2 170 1.2E-24 T 06-07-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 AM402_RS01245 b717a20a69c8235e0047ce137961fd56 176 SUPERFAMILY SSF56235 1 172 3.87E-60 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS01245 b717a20a69c8235e0047ce137961fd56 176 PIRSF PIRSF039093 1 175 8.2E-89 T 06-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM402_RS01245 b717a20a69c8235e0047ce137961fd56 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.6E-87 T 06-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 SUPERFAMILY SSF53223 7 270 2.23E-110 T 06-07-2017 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 Gene3D G3DSA:3.40.50.10380 17 268 1.9E-117 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 SUPERFAMILY SSF51735 271 562 4.34E-94 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 1.4E-79 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 Gene3D G3DSA:3.40.50.720 269 562 8.3E-110 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 PIRSF PIRSF000106 2 563 5.1E-230 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 06-07-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.803 T 06-07-2017 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 SMART SM01274 81 261 1.6E-109 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 1.8E-103 T 06-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 SMART SM00919 271 531 1.4E-133 T 06-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 PRINTS PR00072 Malic enzyme signature 408 424 1.8E-72 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 PRINTS PR00072 Malic enzyme signature 87 111 1.8E-72 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 PRINTS PR00072 Malic enzyme signature 147 176 1.8E-72 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 PRINTS PR00072 Malic enzyme signature 183 205 1.8E-72 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 PRINTS PR00072 Malic enzyme signature 267 283 1.8E-72 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 PRINTS PR00072 Malic enzyme signature 242 260 1.8E-72 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AM402_RS15765 2e9f672e2345515bce099f9b125a7a87 565 PRINTS PR00072 Malic enzyme signature 298 314 1.8E-72 T 06-07-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 56 74 4.0E-55 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 272 291 4.0E-55 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 154 176 4.0E-55 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 99 121 4.0E-55 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 4.0E-55 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 243 260 4.0E-55 T 06-07-2017 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 57 68 3.3E-13 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 3.3E-13 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 237 249 3.3E-13 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 3.3E-13 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 156 167 3.3E-13 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 Pfam PF00267 Gram-negative porin 28 371 8.7E-129 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 Gene3D G3DSA:2.40.160.10 23 371 5.9E-93 T 06-07-2017 IPR023614 Porin domain AM402_RS15125 07486cdcbf7cda5872cadbb7644249d9 371 SUPERFAMILY SSF56935 23 371 2.88E-74 T 06-07-2017 AM402_RS13560 2b4e33744d83784292e3f20730a5cc42 245 Pfam PF02811 PHP domain 5 81 1.2E-9 T 06-07-2017 IPR004013 PHP domain GO:0003824 AM402_RS13560 2b4e33744d83784292e3f20730a5cc42 245 SUPERFAMILY SSF89550 3 238 2.49E-60 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM402_RS13560 2b4e33744d83784292e3f20730a5cc42 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 47.844 T 06-07-2017 IPR023710 Probable phosphatase YcdX GO:0008270 AM402_RS13560 2b4e33744d83784292e3f20730a5cc42 245 SMART SM00481 4 78 1.5E-14 T 06-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AM402_RS13560 2b4e33744d83784292e3f20730a5cc42 245 Gene3D G3DSA:3.20.20.140 1 237 1.2E-58 T 06-07-2017 AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 SUPERFAMILY SSF50249 14 69 9.71E-11 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 26 433 3.2E-131 T 06-07-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 SUPERFAMILY SSF53335 77 440 3.0E-83 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 Gene3D G3DSA:2.40.50.140 3 89 3.8E-26 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 20 441 66.158 T 06-07-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 372 402 - T 06-07-2017 IPR030390 RNA methyltransferase TrmA, active site AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 126 440 1.0E-28 T 06-07-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 Pfam PF01938 TRAM domain 21 69 2.0E-7 T 06-07-2017 IPR002792 TRAM domain AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 423 433 - T 06-07-2017 IPR030391 RNA methyltransferase TrmA, conserved site AM402_RS18425 c64019b505b829b3c865f08e4eadeea9 441 Gene3D G3DSA:3.40.50.150 253 438 5.0E-60 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14490 bffbd6ca4eb9eddf42667895f27460d7 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 155 2.1E-27 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS14490 bffbd6ca4eb9eddf42667895f27460d7 668 Gene3D G3DSA:2.40.170.20 160 668 2.9E-103 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS14490 bffbd6ca4eb9eddf42667895f27460d7 668 SUPERFAMILY SSF56935 35 668 2.98E-125 T 06-07-2017 AM402_RS14490 bffbd6ca4eb9eddf42667895f27460d7 668 Pfam PF00593 TonB dependent receptor 396 667 2.4E-43 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS14490 bffbd6ca4eb9eddf42667895f27460d7 668 Gene3D G3DSA:2.170.130.10 43 159 4.0E-41 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 SUPERFAMILY SSF51735 6 130 1.72E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 SUPERFAMILY SSF51735 240 271 1.72E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 Gene3D G3DSA:3.40.50.720 5 167 4.4E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 SUPERFAMILY SSF55347 131 240 1.09E-36 T 06-07-2017 AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 7 129 5.9E-41 T 06-07-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 2.2E-42 T 06-07-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 268 1.9E-105 T 06-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 PIRSF PIRSF000161 4 272 4.3E-90 T 06-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.886 T 06-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS19315 98b2def56f6dc96d58b54c65d2ecc218 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 06-07-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 Pfam PF11638 DnaA N-terminal domain 4 64 2.5E-19 T 06-07-2017 IPR024633 DnaA N-terminal domain AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 SUPERFAMILY SSF52540 131 342 2.01E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 184 1.2E-54 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 1.2E-54 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 262 289 1.2E-54 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 1.2E-54 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 228 242 1.2E-54 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 Gene3D G3DSA:3.40.50.300 120 295 1.9E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 Gene3D G3DSA:1.10.1750.10 365 465 7.3E-43 T 06-07-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 1.0E-32 T 06-07-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 06-07-2017 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 Pfam PF00308 Bacterial dnaA protein 132 348 3.2E-99 T 06-07-2017 IPR013317 Chromosomal replication initiator protein DnaA AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 SMART SM00760 374 443 6.1E-45 T 06-07-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 464 1.3E-187 T 06-07-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 SUPERFAMILY SSF48295 362 465 3.4E-38 T 06-07-2017 IPR010921 Trp repressor/replication initiator GO:0043565 AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 Gene3D G3DSA:1.10.8.60 297 364 8.8E-31 T 06-07-2017 AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 SMART SM00382 163 365 2.2E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS01895 ada4cf4ed3ab5efc576f3f0891bd50d9 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 465 34.514 T 06-07-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 06-07-2017 IPR020845 AMP-binding, conserved site AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 3.2E-26 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.1E-18 T 06-07-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 Gene3D G3DSA:3.30.300.30 518 637 5.7E-30 T 06-07-2017 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 Pfam PF00501 AMP-binding enzyme 83 522 2.9E-90 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.256 T 06-07-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 Gene3D G3DSA:3.40.50.980 267 424 2.3E-27 T 06-07-2017 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 Gene3D G3DSA:3.40.50.980 79 266 2.8E-45 T 06-07-2017 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 06-07-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 Gene3D G3DSA:2.30.38.10 439 515 1.1E-6 T 06-07-2017 AM402_RS02430 5535ad9c3969abeb9d7120a504d0ffc0 652 SUPERFAMILY SSF56801 10 643 1.83E-186 T 06-07-2017 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 SUPERFAMILY SSF81442 43 558 1.13E-175 T 06-07-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 Gene3D G3DSA:1.20.210.10 39 589 8.8E-187 T 06-07-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 1.6E-135 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 06-07-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 06-07-2017 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18910 7246753112bc7d742dad1dbfc8efaaf1 660 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.3E-95 T 06-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS06625 2696ff92d78aa5491d37dfd172130b4d 327 SUPERFAMILY SSF49401 195 327 8.95E-25 T 06-07-2017 IPR008966 Adhesion domain AM402_RS06625 2696ff92d78aa5491d37dfd172130b4d 327 Pfam PF00419 Fimbrial protein 193 326 5.6E-18 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06625 2696ff92d78aa5491d37dfd172130b4d 327 Gene3D G3DSA:2.60.40.1090 195 327 3.4E-27 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04585 79c00a90987cfa0e6e913ccf8cbcfe47 72 SUPERFAMILY SSF141729 10 53 1.96E-11 T 06-07-2017 AM402_RS04585 79c00a90987cfa0e6e913ccf8cbcfe47 72 Pfam PF13954 PapC N-terminal domain 10 53 1.3E-10 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 SUPERFAMILY SSF81891 120 400 1.31E-55 T 06-07-2017 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.7E-16 T 06-07-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 PIRSF PIRSF000813 1 407 4.5E-196 T 06-07-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 52.04 T 06-07-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 Gene3D G3DSA:3.30.460.10 2 121 4.7E-31 T 06-07-2017 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 Pfam PF01966 HD domain 229 345 3.4E-11 T 06-07-2017 IPR006674 HD domain AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 Gene3D G3DSA:1.10.3090.10 122 358 9.9E-56 T 06-07-2017 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 Pfam PF01743 Poly A polymerase head domain 3 122 2.3E-18 T 06-07-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 SUPERFAMILY SSF81301 2 119 1.53E-30 T 06-07-2017 AM402_RS05875 935d7c8c68c5b2ec491801fbef02c812 407 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.692 T 06-07-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 SMART SM00342 20 103 6.2E-13 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 Gene3D G3DSA:1.10.10.60 2 57 8.4E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 SUPERFAMILY SSF46689 3 53 1.16E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 3.4E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 3.4E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 Gene3D G3DSA:3.20.80.10 219 284 1.1E-10 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 SUPERFAMILY SSF46689 57 112 7.17E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 Gene3D G3DSA:1.10.10.60 58 116 2.4E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17965 877cb67031b511ae99d4ea36baa3520d 285 Pfam PF12833 Helix-turn-helix domain 28 104 1.3E-13 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS10965 47614dd500cb0cbadca4af68d2267a4b 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 330 1.3E-28 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS10965 47614dd500cb0cbadca4af68d2267a4b 335 SUPERFAMILY SSF52540 23 265 3.08E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10965 47614dd500cb0cbadca4af68d2267a4b 335 Gene3D G3DSA:3.40.50.300 9 269 5.5E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10965 47614dd500cb0cbadca4af68d2267a4b 335 Pfam PF00005 ABC transporter 42 193 3.8E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS10965 47614dd500cb0cbadca4af68d2267a4b 335 SMART SM00382 50 243 5.9E-17 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS10965 47614dd500cb0cbadca4af68d2267a4b 335 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS10965 47614dd500cb0cbadca4af68d2267a4b 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 312 1.5E-18 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS14580 fb5dac08f7165f5d1eb75277d445e98c 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 1.0E-26 T 06-07-2017 IPR009857 Uncharacterised protein family UPF0352 AM402_RS14580 fb5dac08f7165f5d1eb75277d445e98c 75 Gene3D G3DSA:1.10.3390.10 1 73 8.2E-36 T 06-07-2017 IPR023202 YejL-like domain AM402_RS14580 fb5dac08f7165f5d1eb75277d445e98c 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.9E-22 T 06-07-2017 IPR009857 Uncharacterised protein family UPF0352 AM402_RS14580 fb5dac08f7165f5d1eb75277d445e98c 75 PIRSF PIRSF006188 1 72 1.0E-34 T 06-07-2017 IPR009857 Uncharacterised protein family UPF0352 AM402_RS14580 fb5dac08f7165f5d1eb75277d445e98c 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.28 T 06-07-2017 IPR009857 Uncharacterised protein family UPF0352 AM402_RS14580 fb5dac08f7165f5d1eb75277d445e98c 75 SUPERFAMILY SSF158651 1 74 1.26E-30 T 06-07-2017 AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 Pfam PF00571 CBS domain 371 420 2.5E-8 T 06-07-2017 IPR000644 CBS domain AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 Gene3D G3DSA:3.30.465.10 414 513 1.2E-26 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 Pfam PF03471 Transporter associated domain 438 513 1.2E-20 T 06-07-2017 IPR005170 Transporter-associated domain AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 Gene3D G3DSA:3.10.580.10 286 413 5.3E-15 T 06-07-2017 AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 SMART SM00116 309 359 5.6 T 06-07-2017 IPR000644 CBS domain AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 SMART SM00116 372 420 3.9 T 06-07-2017 IPR000644 CBS domain AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 SUPERFAMILY SSF56176 435 524 4.91E-23 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 SMART SM01091 437 516 4.6E-28 T 06-07-2017 IPR005170 Transporter-associated domain AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 Pfam PF03741 Integral membrane protein TerC family 15 203 1.2E-49 T 06-07-2017 IPR005496 Integral membrane protein TerC GO:0016021 AM402_RS15715 11395d32c55eb1155b81529ca79f5bb9 526 SUPERFAMILY SSF54631 288 422 7.58E-24 T 06-07-2017 AM402_RS06290 8f2fe03d9300e6c5bcdc0681d0a52b6d 165 SUPERFAMILY SSF111384 22 164 3.27E-36 T 06-07-2017 IPR024930 Skp domain AM402_RS06290 8f2fe03d9300e6c5bcdc0681d0a52b6d 165 PIRSF PIRSF002094 1 165 9.5E-52 T 06-07-2017 IPR005632 Chaperone protein Skp GO:0051082 AM402_RS06290 8f2fe03d9300e6c5bcdc0681d0a52b6d 165 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 2.4E-35 T 06-07-2017 IPR005632 Chaperone protein Skp GO:0051082 AM402_RS06290 8f2fe03d9300e6c5bcdc0681d0a52b6d 165 SMART SM00935 12 165 3.6E-50 T 06-07-2017 IPR005632 Chaperone protein Skp GO:0051082 AM402_RS06290 8f2fe03d9300e6c5bcdc0681d0a52b6d 165 Gene3D G3DSA:3.30.910.20 12 60 1.3E-37 T 06-07-2017 AM402_RS06290 8f2fe03d9300e6c5bcdc0681d0a52b6d 165 Gene3D G3DSA:3.30.910.20 98 165 1.3E-37 T 06-07-2017 AM402_RS14150 af9f39b8ffd41d15d159a2fe6a369725 226 ProDom PD038144 ANTITERMINATOR Q PROPHAGE TRANSCRIPTION ANTITERMINATION CP-933P GIFSY-1 ENCODED BY Q-LIKE 6 209 6.0E-35 T 06-07-2017 IPR010455 Bacteriophage 82, GpQ AM402_RS14150 af9f39b8ffd41d15d159a2fe6a369725 226 Pfam PF06323 Phage antitermination protein Q 6 217 5.2E-58 T 06-07-2017 IPR010455 Bacteriophage 82, GpQ AM402_RS09410 668ad8a7e3a9d0e173adde9432a2609a 180 Pfam PF06041 Bacterial protein of unknown function (DUF924) 7 177 5.0E-61 T 06-07-2017 IPR010323 Protein of unknown function DUF924 AM402_RS09410 668ad8a7e3a9d0e173adde9432a2609a 180 Gene3D G3DSA:1.20.58.320 5 79 6.4E-28 T 06-07-2017 AM402_RS09410 668ad8a7e3a9d0e173adde9432a2609a 180 Gene3D G3DSA:1.25.40.10 80 180 1.2E-35 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS09410 668ad8a7e3a9d0e173adde9432a2609a 180 SUPERFAMILY SSF48452 2 176 3.11E-66 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.299 T 06-07-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 Gene3D G3DSA:1.20.200.10 108 374 4.0E-105 T 06-07-2017 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.8E-68 T 06-07-2017 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.8E-68 T 06-07-2017 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.8E-68 T 06-07-2017 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.8E-68 T 06-07-2017 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.8E-68 T 06-07-2017 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.8E-68 T 06-07-2017 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 Pfam PF00206 Lyase 6 301 4.4E-95 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 Gene3D G3DSA:1.10.40.30 375 432 1.3E-29 T 06-07-2017 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 7.1E-29 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 7.1E-29 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 7.1E-29 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 7.1E-29 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 SUPERFAMILY SSF48557 3 456 5.03E-143 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 1.1E-211 T 06-07-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 Gene3D G3DSA:1.10.275.10 1 107 6.8E-38 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal AM402_RS01135 e8f8fc4460fef96f0a7c5c29d7ab875e 460 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.8E-23 T 06-07-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 SUPERFAMILY SSF49503 329 469 8.48E-15 T 06-07-2017 IPR008972 Cupredoxin AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 Pfam PF07731 Multicopper oxidase 355 472 2.1E-13 T 06-07-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 SUPERFAMILY SSF49503 173 309 7.44E-26 T 06-07-2017 IPR008972 Cupredoxin AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 Gene3D G3DSA:2.60.40.420 364 469 8.1E-13 T 06-07-2017 IPR008972 Cupredoxin AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 470 57.88 T 06-07-2017 IPR026589 Cell division protein FtsP GO:0043093 AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 Gene3D G3DSA:2.60.40.420 35 171 1.2E-22 T 06-07-2017 IPR008972 Cupredoxin AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 Gene3D G3DSA:2.60.40.420 172 289 1.4E-27 T 06-07-2017 IPR008972 Cupredoxin AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 26 7.0E-4 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 Pfam PF07732 Multicopper oxidase 53 168 1.2E-27 T 06-07-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM402_RS05970 0c0cac135042bf5bb7a698ed93e28978 473 SUPERFAMILY SSF49503 4 167 1.44E-25 T 06-07-2017 IPR008972 Cupredoxin AM402_RS10205 4faa8332dcedf54db7306477113d161a 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 5 132 8.0E-47 T 06-07-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM402_RS10205 4faa8332dcedf54db7306477113d161a 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.792 T 06-07-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM402_RS10205 4faa8332dcedf54db7306477113d161a 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 1.2E-48 T 06-07-2017 IPR007382 Uncharacterised protein family UPF0756, transmembrame AM402_RS00280 fb74123b2c044ec258bbef57e87b8d67 580 Pfam PF07244 Surface antigen variable number repeat 190 246 2.6E-7 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 AM402_RS00280 fb74123b2c044ec258bbef57e87b8d67 580 Gene3D G3DSA:2.40.160.50 242 579 3.4E-23 T 06-07-2017 AM402_RS00280 fb74123b2c044ec258bbef57e87b8d67 580 Pfam PF01103 Surface antigen 284 578 5.7E-30 T 06-07-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 AM402_RS21275 8bc0edec34524fda3ea8aaaa23a988d2 334 Gene3D G3DSA:1.10.10.10 11 93 4.2E-6 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS21275 8bc0edec34524fda3ea8aaaa23a988d2 334 SUPERFAMILY SSF46785 21 98 4.09E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11895 3a69f753560ba05d919de569b743da7b 327 Gene3D G3DSA:1.20.58.340 253 327 1.9E-18 T 06-07-2017 AM402_RS11895 3a69f753560ba05d919de569b743da7b 327 SUPERFAMILY SSF144083 263 324 4.32E-14 T 06-07-2017 AM402_RS11895 3a69f753560ba05d919de569b743da7b 327 Pfam PF01544 CorA-like Mg2+ transporter protein 42 323 4.9E-58 T 06-07-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM402_RS11895 3a69f753560ba05d919de569b743da7b 327 SUPERFAMILY SSF143865 15 259 5.23E-43 T 06-07-2017 AM402_RS11895 3a69f753560ba05d919de569b743da7b 327 Gene3D G3DSA:1.20.58.340 145 243 1.5E-13 T 06-07-2017 AM402_RS19430 049db28d2f0403a1c265934d35792dda 179 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 170 28.596 T 06-07-2017 IPR002786 Non-canonical purine NTP phosphatase AM402_RS19430 049db28d2f0403a1c265934d35792dda 179 Gene3D G3DSA:3.90.950.10 2 168 8.5E-60 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AM402_RS19430 049db28d2f0403a1c265934d35792dda 179 Pfam PF01931 Protein of unknown function DUF84 7 165 2.0E-52 T 06-07-2017 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AM402_RS19430 049db28d2f0403a1c265934d35792dda 179 SUPERFAMILY SSF52972 1 169 5.67E-57 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AM402_RS19430 049db28d2f0403a1c265934d35792dda 179 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 169 8.9E-47 T 06-07-2017 IPR002786 Non-canonical purine NTP phosphatase AM402_RS00955 89f29b631f3d4c07478ef9e26c8771bd 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 2.1E-58 T 06-07-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM402_RS00955 89f29b631f3d4c07478ef9e26c8771bd 123 Gene3D G3DSA:2.40.150.20 1 123 1.8E-55 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM402_RS00955 89f29b631f3d4c07478ef9e26c8771bd 123 SMART SM01374 1 123 1.1E-84 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM402_RS00955 89f29b631f3d4c07478ef9e26c8771bd 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.3E-54 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM402_RS00955 89f29b631f3d4c07478ef9e26c8771bd 123 SUPERFAMILY SSF50193 2 122 4.71E-51 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM402_RS00955 89f29b631f3d4c07478ef9e26c8771bd 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.521 T 06-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM402_RS00955 89f29b631f3d4c07478ef9e26c8771bd 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 06-07-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 Gene3D G3DSA:3.40.50.2300 1 120 1.6E-25 T 06-07-2017 AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 188 1.5E-17 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 SMART SM00448 2 113 4.3E-19 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 Gene3D G3DSA:1.10.10.10 126 190 4.4E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 1.4E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 1.4E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 1.4E-9 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 SMART SM00421 133 190 5.5E-18 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 SUPERFAMILY SSF52172 1 158 1.42E-27 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS09515 3ffca862aa7f1b3ca8f42292564c2a50 200 Pfam PF00072 Response regulator receiver domain 4 113 7.9E-22 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS11505 5ac5477b76c13293fb8ece09753ea1ab 148 SUPERFAMILY SSF103370 5 135 8.37E-31 T 06-07-2017 IPR008711 Recombinase NinB AM402_RS11505 5ac5477b76c13293fb8ece09753ea1ab 148 Pfam PF05772 NinB protein 5 134 2.1E-38 T 06-07-2017 IPR008711 Recombinase NinB AM402_RS11505 5ac5477b76c13293fb8ece09753ea1ab 148 Gene3D G3DSA:1.10.3790.10 4 143 5.3E-41 T 06-07-2017 IPR008711 Recombinase NinB AM402_RS16665 c7f9552522cdfe52ca04a934cf7d4ff6 387 PIRSF PIRSF038994 1 387 4.4E-109 T 06-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM402_RS16665 c7f9552522cdfe52ca04a934cf7d4ff6 387 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 381 2.5E-148 T 06-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM402_RS16665 c7f9552522cdfe52ca04a934cf7d4ff6 387 Gene3D G3DSA:3.20.20.140 56 336 2.8E-93 T 06-07-2017 AM402_RS16665 c7f9552522cdfe52ca04a934cf7d4ff6 387 Gene3D G3DSA:2.30.40.10 3 55 4.3E-10 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS16665 c7f9552522cdfe52ca04a934cf7d4ff6 387 Gene3D G3DSA:2.30.40.10 337 381 4.1E-8 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS16665 c7f9552522cdfe52ca04a934cf7d4ff6 387 SUPERFAMILY SSF51556 54 355 8.9E-97 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS16665 c7f9552522cdfe52ca04a934cf7d4ff6 387 SUPERFAMILY SSF51338 1 53 3.51E-16 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS16665 c7f9552522cdfe52ca04a934cf7d4ff6 387 Pfam PF01979 Amidohydrolase family 50 381 5.2E-35 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 2.3E-35 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 2.3E-35 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 2.3E-35 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 2.3E-35 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 293 3.4E-116 T 06-07-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 Gene3D G3DSA:3.20.20.70 6 299 1.0E-112 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 SUPERFAMILY SSF51569 7 294 4.08E-96 T 06-07-2017 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 295 64.42 T 06-07-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 PIRSF PIRSF001365 4 299 4.7E-89 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 Pfam PF00701 Dihydrodipicolinate synthetase family 8 293 7.9E-114 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 06-07-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 06-07-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS10185 e2228b211f7796bd5a943e98efb478c0 299 SMART SM01130 7 297 5.0E-140 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.1E-78 T 06-07-2017 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 179.624 T 06-07-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 SUPERFAMILY SSF56059 123 313 1.69E-56 T 06-07-2017 AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 1.1E-137 T 06-07-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 SUPERFAMILY SSF52440 2 122 4.89E-45 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.8E-46 T 06-07-2017 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 Gene3D G3DSA:3.40.50.20 2 129 5.5E-55 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 Gene3D G3DSA:3.30.470.20 192 297 1.5E-48 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS17315 1f98700d1f30eb4f6f6e41262c73b78f 318 Gene3D G3DSA:3.30.1490.20 137 191 1.0E-30 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 61 80 1.4E-37 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 363 377 1.4E-37 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 289 311 1.4E-37 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 427 440 1.4E-37 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 1.4E-37 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 449 5.4E-154 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 Gene3D G3DSA:3.40.710.10 230 472 2.5E-67 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 26 471 9.0E-148 T 06-07-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS00190 f1cc979319a9d11bf358da5e140557c1 480 SUPERFAMILY SSF56601 26 476 2.82E-95 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS01835 9822cb26e549f018ebf2f7ec7f9e8779 73 SUPERFAMILY SSF143120 1 67 3.53E-14 T 06-07-2017 AM402_RS01835 9822cb26e549f018ebf2f7ec7f9e8779 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 54 2.9E-11 T 06-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM402_RS01835 9822cb26e549f018ebf2f7ec7f9e8779 73 Gene3D G3DSA:3.40.1620.10 1 49 6.5E-12 T 06-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM402_RS01835 9822cb26e549f018ebf2f7ec7f9e8779 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 52 1.9E-12 T 06-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM402_RS07975 40a1ad3390d774eaf3d4b2e8fcdc8d90 246 Gene3D G3DSA:1.10.10.10 10 99 3.5E-6 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07975 40a1ad3390d774eaf3d4b2e8fcdc8d90 246 SUPERFAMILY SSF46894 6 97 1.7E-8 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS20285 52982d0bf60060506da3719f6239cd7f 489 SUPERFAMILY SSF50475 3 322 3.14E-128 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS20285 52982d0bf60060506da3719f6239cd7f 489 SUPERFAMILY SSF143968 323 485 1.29E-65 T 06-07-2017 AM402_RS20285 52982d0bf60060506da3719f6239cd7f 489 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.457 T 06-07-2017 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM402_RS20285 52982d0bf60060506da3719f6239cd7f 489 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 4.6E-170 T 06-07-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM402_RS20285 52982d0bf60060506da3719f6239cd7f 489 Gene3D G3DSA:1.20.5.570 455 488 3.5E-15 T 06-07-2017 AM402_RS20285 52982d0bf60060506da3719f6239cd7f 489 Gene3D G3DSA:3.40.1670.10 338 454 2.5E-54 T 06-07-2017 AM402_RS20285 52982d0bf60060506da3719f6239cd7f 489 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 6.4E-184 T 06-07-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM402_RS08675 2251976f33941ee85d1e554473cf72e7 145 Gene3D G3DSA:3.40.630.30 1 121 3.3E-30 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS08675 2251976f33941ee85d1e554473cf72e7 145 SUPERFAMILY SSF55729 1 129 1.59E-27 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS08675 2251976f33941ee85d1e554473cf72e7 145 Pfam PF00583 Acetyltransferase (GNAT) family 48 121 8.9E-12 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 5.3E-25 T 06-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.743 T 06-07-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 Gene3D G3DSA:1.10.10.250 73 141 8.1E-32 T 06-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 SUPERFAMILY SSF46906 68 141 1.44E-26 T 06-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 Gene3D G3DSA:3.30.1550.10 2 72 7.9E-38 T 06-07-2017 IPR020784 Ribosomal protein L11, N-terminal AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.6E-30 T 06-07-2017 IPR020784 Ribosomal protein L11, N-terminal AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 4.7E-66 T 06-07-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 SUPERFAMILY SSF54747 3 73 4.06E-30 T 06-07-2017 IPR020784 Ribosomal protein L11, N-terminal AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-16 T 06-07-2017 AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 SMART SM00649 9 141 1.3E-84 T 06-07-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM402_RS03660 09ac8c963fe9605a5cec5e68fc6ad604 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 06-07-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 5.1E-21 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 Gene3D G3DSA:3.90.650.10 145 322 1.0E-52 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 SUPERFAMILY SSF56042 144 308 3.74E-39 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 296 2.1E-9 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 31.001 T 06-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 Gene3D G3DSA:3.30.1330.10 3 140 6.8E-44 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 PIRSF PIRSF005303 1 322 3.9E-88 T 06-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 8.2E-113 T 06-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM402_RS19015 2358a167d9a512d76e4b94132a06f6c9 326 SUPERFAMILY SSF55326 4 138 8.37E-33 T 06-07-2017 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.0E-26 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 SUPERFAMILY SSF53659 430 755 1.44E-90 T 06-07-2017 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 06-07-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 SUPERFAMILY SSF53223 10 161 5.61E-52 T 06-07-2017 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 PIRSF PIRSF036684 1 759 0.0 T 06-07-2017 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 Gene3D G3DSA:3.40.50.10380 9 160 5.9E-50 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 SMART SM00919 163 401 5.3E-139 T 06-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 Pfam PF03949 Malic enzyme, NAD binding domain 165 361 2.3E-19 T 06-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 SUPERFAMILY SSF51735 163 453 8.09E-86 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 SMART SM01274 18 151 5.5E-79 T 06-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 Gene3D G3DSA:3.40.50.720 161 449 2.7E-87 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 1.5E-97 T 06-07-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM402_RS10250 d192b412a21eb9f7698341727241b4e3 760 Gene3D G3DSA:3.40.50.10750 569 726 1.0E-50 T 06-07-2017 AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Pfam PF13332 Haemagluttinin repeat 460 577 2.1E-7 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Pfam PF13332 Haemagluttinin repeat 1111 1273 2.6E-16 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Pfam PF13332 Haemagluttinin repeat 382 447 4.1E-6 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Pfam PF13332 Haemagluttinin repeat 1313 1366 5.5E-10 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Pfam PF13332 Haemagluttinin repeat 928 1092 1.7E-20 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Pfam PF13332 Haemagluttinin repeat 611 769 1.2E-12 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Pfam PF13332 Haemagluttinin repeat 792 883 0.0019 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Pfam PF05860 haemagglutination activity domain 33 166 6.5E-30 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS07505 6510159129c96bca59932826571aafc3 1577 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 65 158 2.1E-16 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS07505 6510159129c96bca59932826571aafc3 1577 SUPERFAMILY SSF51126 39 286 1.1E-50 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS07505 6510159129c96bca59932826571aafc3 1577 SUPERFAMILY SSF51126 403 429 1.1E-50 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS07505 6510159129c96bca59932826571aafc3 1577 Gene3D G3DSA:2.160.20.10 37 284 8.2E-69 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS07505 6510159129c96bca59932826571aafc3 1577 SMART SM00912 47 167 2.9E-42 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS18980 1197f48a2c027291ff3fe928d195b41e 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.113 T 06-07-2017 IPR023064 D-ribose pyranase GO:0016872 AM402_RS18980 1197f48a2c027291ff3fe928d195b41e 139 Gene3D G3DSA:3.40.1650.10 1 139 3.3E-38 T 06-07-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM402_RS18980 1197f48a2c027291ff3fe928d195b41e 139 SUPERFAMILY SSF102546 1 139 6.41E-43 T 06-07-2017 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM402_RS18980 1197f48a2c027291ff3fe928d195b41e 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 4.3E-45 T 06-07-2017 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.767 T 06-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 06-07-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 SUPERFAMILY SSF54631 94 203 3.28E-25 T 06-07-2017 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 SMART SM01240 7 473 0.0 T 06-07-2017 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 PIRSF PIRSF000130 1 487 4.0E-196 T 06-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.6E-159 T 06-07-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.1E-195 T 06-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 SUPERFAMILY SSF51412 217 477 6.02E-126 T 06-07-2017 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 SUPERFAMILY SSF51412 2 90 6.02E-126 T 06-07-2017 AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 SMART SM00116 158 206 1.8E-7 T 06-07-2017 IPR000644 CBS domain AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 SMART SM00116 96 144 1.8E-11 T 06-07-2017 IPR000644 CBS domain AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 Pfam PF00571 CBS domain 149 203 2.8E-4 T 06-07-2017 IPR000644 CBS domain AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 Pfam PF00571 CBS domain 95 140 7.6E-9 T 06-07-2017 IPR000644 CBS domain AM402_RS10280 2ef5896cdc1ae7693bcae1a4c85044c7 488 Gene3D G3DSA:3.20.20.70 2 485 9.1E-194 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS17820 807a43e394acf32b0a282dcdd50f31ae 218 Pfam PF11444 Protein of unknown function (DUF2895) 6 203 3.2E-85 T 06-07-2017 IPR021548 Protein of unknown function DUF2895 AM402_RS17820 807a43e394acf32b0a282dcdd50f31ae 218 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 1.7E-88 T 06-07-2017 IPR021548 Protein of unknown function DUF2895 AM402_RS04785 c1c3d87c7f4934c06f445e722b613628 509 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 4 496 2.7E-179 T 06-07-2017 IPR021207 Integrating conjugative element protein, PFL4705 AM402_RS04785 c1c3d87c7f4934c06f445e722b613628 509 Pfam PF03743 Bacterial conjugation TrbI-like protein 377 482 3.8E-6 T 06-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 Pfam PF00248 Aldo/keto reductase family 6 250 3.4E-46 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 4.0E-45 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 4.0E-45 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 4.0E-45 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 4.0E-45 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 4.0E-45 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 Gene3D G3DSA:3.20.20.100 1 259 4.2E-85 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 PIRSF PIRSF000097 1 265 2.4E-66 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS14945 600be97a6cf458b941f4f1862c929462 267 SUPERFAMILY SSF51430 2 257 1.24E-78 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain AM402_RS02970 7a51abb970dcc59b99282712546719ed 334 SUPERFAMILY SSF47413 4 60 2.18E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS02970 7a51abb970dcc59b99282712546719ed 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 1.6E-4 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS02970 7a51abb970dcc59b99282712546719ed 334 SUPERFAMILY SSF53822 62 323 4.5E-35 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS02970 7a51abb970dcc59b99282712546719ed 334 Gene3D G3DSA:3.40.50.2300 168 329 6.4E-26 T 06-07-2017 AM402_RS02970 7a51abb970dcc59b99282712546719ed 334 Gene3D G3DSA:1.10.260.40 4 57 2.3E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS02970 7a51abb970dcc59b99282712546719ed 334 Pfam PF13407 Periplasmic binding protein domain 67 266 2.9E-11 T 06-07-2017 IPR025997 Periplasmic binding protein AM402_RS02970 7a51abb970dcc59b99282712546719ed 334 Gene3D G3DSA:3.40.50.2300 58 167 4.0E-30 T 06-07-2017 AM402_RS02970 7a51abb970dcc59b99282712546719ed 334 SMART SM00354 2 75 3.1E-12 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 SUPERFAMILY SSF51905 97 261 2.41E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 SUPERFAMILY SSF51905 5 66 2.41E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 Pfam PF01134 Glucose inhibited division protein A 8 397 2.1E-169 T 06-07-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 Gene3D G3DSA:3.50.50.60 7 232 1.3E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 06-07-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 624 2.5E-297 T 06-07-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 626 42.707 T 06-07-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 SMART SM01228 548 619 7.3E-44 T 06-07-2017 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 Pfam PF13932 GidA associated domain 402 618 3.8E-72 T 06-07-2017 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AM402_RS02330 876e8b2cbdfbc0b81ec0164cf76b93b1 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 06-07-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM402_RS11685 9adc81003aa4506641eded9228614412 239 Pfam PF00877 NlpC/P60 family 105 216 7.0E-14 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS11685 9adc81003aa4506641eded9228614412 239 Gene3D G3DSA:3.90.1720.10 110 223 6.0E-14 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS11685 9adc81003aa4506641eded9228614412 239 Gene3D G3DSA:3.40.140.10 4 109 4.1E-13 T 06-07-2017 AM402_RS11685 9adc81003aa4506641eded9228614412 239 Pfam PF14464 Prokaryotic homologs of the JAB domain 4 90 8.6E-9 T 06-07-2017 IPR028090 JAB domain, prokaryotic AM402_RS11685 9adc81003aa4506641eded9228614412 239 SUPERFAMILY SSF54001 102 222 6.96E-14 T 06-07-2017 AM402_RS11685 9adc81003aa4506641eded9228614412 239 SUPERFAMILY SSF102712 5 90 1.06E-13 T 06-07-2017 AM402_RS16370 9adc81003aa4506641eded9228614412 239 Pfam PF00877 NlpC/P60 family 105 216 7.0E-14 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS16370 9adc81003aa4506641eded9228614412 239 Gene3D G3DSA:3.90.1720.10 110 223 6.0E-14 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS16370 9adc81003aa4506641eded9228614412 239 Gene3D G3DSA:3.40.140.10 4 109 4.1E-13 T 06-07-2017 AM402_RS16370 9adc81003aa4506641eded9228614412 239 Pfam PF14464 Prokaryotic homologs of the JAB domain 4 90 8.6E-9 T 06-07-2017 IPR028090 JAB domain, prokaryotic AM402_RS16370 9adc81003aa4506641eded9228614412 239 SUPERFAMILY SSF54001 102 222 6.96E-14 T 06-07-2017 AM402_RS16370 9adc81003aa4506641eded9228614412 239 SUPERFAMILY SSF102712 5 90 1.06E-13 T 06-07-2017 AM402_RS13020 8c079017b070dddf55a674c6a1f441b2 241 Gene3D G3DSA:3.40.50.300 3 215 2.3E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13020 8c079017b070dddf55a674c6a1f441b2 241 SMART SM00382 29 199 8.6E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS13020 8c079017b070dddf55a674c6a1f441b2 241 Pfam PF00005 ABC transporter 20 149 1.7E-29 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS13020 8c079017b070dddf55a674c6a1f441b2 241 SUPERFAMILY SSF52540 4 218 6.85E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13020 8c079017b070dddf55a674c6a1f441b2 241 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 320 2.6E-53 T 06-07-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 Gene3D G3DSA:3.40.50.720 4 184 7.6E-57 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01650 e518859525e59042107890b9e3cb626a 337 SUPERFAMILY SSF48179 181 332 6.04E-58 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 Gene3D G3DSA:1.10.1040.10 185 327 5.9E-59 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 158 1.6E-51 T 06-07-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 323 37.718 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 3.2E-41 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 3.2E-41 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 3.2E-41 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 3.2E-41 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 3.2E-41 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 3.2E-41 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS01650 e518859525e59042107890b9e3cb626a 337 SUPERFAMILY SSF51735 5 179 1.61E-52 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01650 e518859525e59042107890b9e3cb626a 337 PIRSF PIRSF000114 1 333 2.0E-102 T 06-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS16825 4be526af6ca7c5cd2dd390acabacd3b0 108 Gene3D G3DSA:3.30.460.10 7 108 1.5E-37 T 06-07-2017 AM402_RS16825 4be526af6ca7c5cd2dd390acabacd3b0 108 Pfam PF02410 Ribosomal silencing factor during starvation 13 107 2.1E-28 T 06-07-2017 AM402_RS16825 4be526af6ca7c5cd2dd390acabacd3b0 108 SUPERFAMILY SSF81301 7 108 1.34E-36 T 06-07-2017 AM402_RS16825 4be526af6ca7c5cd2dd390acabacd3b0 108 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 6 108 24.554 T 06-07-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM402_RS16825 4be526af6ca7c5cd2dd390acabacd3b0 108 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 10 107 2.0E-37 T 06-07-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 Gene3D G3DSA:3.90.600.10 331 424 2.1E-33 T 06-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 Gene3D G3DSA:3.40.50.20 2 95 3.1E-38 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 2.0E-177 T 06-07-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 SMART SM01210 330 424 1.3E-49 T 06-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 422 2.3E-28 T 06-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 SUPERFAMILY SSF52440 1 103 2.16E-37 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.2E-82 T 06-07-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 SMART SM01209 103 296 1.1E-137 T 06-07-2017 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 7.0E-36 T 06-07-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 06-07-2017 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 Gene3D G3DSA:3.30.1490.20 121 190 7.3E-32 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 Gene3D G3DSA:3.30.470.20 191 327 6.4E-61 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 SUPERFAMILY SSF51246 329 425 3.66E-31 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 SUPERFAMILY SSF56059 104 319 7.07E-66 T 06-07-2017 AM402_RS03760 30c2af5b9ccc3ce17c7bf72c1fe88ac4 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 42.656 T 06-07-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 8.6E-67 T 06-07-2017 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Gene3D G3DSA:3.30.230.10 491 607 1.4E-48 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 SUPERFAMILY SSF54980 613 700 1.01E-29 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 SUPERFAMILY SSF50447 271 411 2.43E-34 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Gene3D G3DSA:3.40.50.300 6 293 1.7E-103 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Pfam PF00679 Elongation factor G C-terminus 610 695 2.0E-31 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Gene3D G3DSA:2.40.30.10 312 412 9.1E-37 T 06-07-2017 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 SUPERFAMILY SSF54211 486 609 1.59E-42 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.7E-17 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 701 111.685 T 06-07-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Gene3D G3DSA:3.30.70.870 413 487 2.7E-39 T 06-07-2017 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 SUPERFAMILY SSF52540 6 287 8.03E-105 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Pfam PF03764 Elongation factor G, domain IV 486 608 1.1E-47 T 06-07-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 702 0.0 T 06-07-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 SUPERFAMILY SSF54980 409 487 4.68E-25 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 SMART SM00889 487 608 2.7E-75 T 06-07-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 7.4E-30 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 SMART SM00838 610 697 2.0E-58 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Pfam PF14492 Elongation Factor G, domain II 411 485 5.0E-35 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS03640 f91ae0381c097a4a970cd06a95692527 704 Gene3D G3DSA:3.30.70.240 608 702 4.1E-33 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 517 617 2.15E-5 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1920 1974 1.06E-6 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 918 1014 1.96E-17 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1319 1415 1.31E-10 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1820 1888 8.24E-8 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1017 1115 3.92E-15 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1123 1208 2.2E-11 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:3.10.350.10 59 108 2.6E-7 T 06-07-2017 IPR018392 LysM domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1517 1609 6.28E-17 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 728 819 3.92E-15 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 820 917 5.1E-15 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF02369 Bacterial Ig-like domain (group 1) 735 815 5.7E-12 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF02369 Bacterial Ig-like domain (group 1) 1032 1114 1.2E-10 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF02369 Bacterial Ig-like domain (group 1) 630 709 2.9E-9 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF02369 Bacterial Ig-like domain (group 1) 830 910 2.1E-9 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF02369 Bacterial Ig-like domain (group 1) 929 1012 9.2E-13 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF02369 Bacterial Ig-like domain (group 1) 1233 1308 2.4E-10 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF11924 Invasin beta-domain of outer membrane 150 407 4.5E-101 T 06-07-2017 IPR024519 Invasin beta-domain of outer membrane AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 1023 1113 4.4E-6 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 824 915 6.7E-7 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 1425 1513 0.015 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 925 1014 6.2E-12 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 1324 1414 0.017 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 1721 1811 0.83 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 1523 1611 6.6E-6 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 728 815 1.0E-10 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 1123 1211 0.043 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 627 715 3.6E-9 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 1224 1312 4.4E-11 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00634 1622 1709 0.019 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1419 1510 1.24E-9 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 PRINTS PR01369 Intimin signature 259 274 9.7E-10 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 PRINTS PR01369 Intimin signature 287 306 9.7E-10 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 PRINTS PR01369 Intimin signature 442 454 9.7E-10 T 06-07-2017 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 621 717 1.3E-19 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 1718 1804 3.2E-10 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 1617 1713 8.6E-13 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 1118 1211 3.3E-17 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 1319 1406 5.2E-13 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF09134 Invasin, domain 3 1521 1616 5.9E-16 T 06-07-2017 IPR015217 Invasin, domain 3 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF09134 Invasin, domain 3 1323 1415 7.3E-11 T 06-07-2017 IPR015217 Invasin, domain 3 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF09134 Invasin, domain 3 1121 1209 2.5E-16 T 06-07-2017 IPR015217 Invasin, domain 3 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1231 1315 3.14E-16 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.1080 1925 1976 9.8E-8 T 06-07-2017 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.1080 2020 2068 3.4E-4 T 06-07-2017 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.1080 1813 1889 1.1E-11 T 06-07-2017 AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 1023 1117 6.1E-16 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 825 920 3.4E-16 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 1521 1616 4.5E-17 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 519 620 9.0E-8 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 1230 1316 1.7E-17 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 729 818 3.0E-17 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 1426 1511 7.3E-10 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Gene3D G3DSA:2.60.40.920 926 1014 3.9E-19 T 06-07-2017 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1616 1712 2.59E-11 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 Pfam PF01476 LysM domain 61 89 1.6E-4 T 06-07-2017 IPR018392 LysM domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 628 719 7.65E-19 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 2018 2068 2.67E-5 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SMART SM00257 60 108 3.9E-6 T 06-07-2017 IPR018392 LysM domain AM402_RS19295 23bee8665c2405029ae9525173e83826 2358 SUPERFAMILY SSF49373 1716 1808 5.23E-10 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS21155 224905c7d0de04b24e8128c6204e6efe 110 Gene3D G3DSA:1.10.10.10 2 95 8.2E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS21155 224905c7d0de04b24e8128c6204e6efe 110 Pfam PF12840 Helix-turn-helix domain 9 69 7.1E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS21155 224905c7d0de04b24e8128c6204e6efe 110 SUPERFAMILY SSF46785 2 93 1.4E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS21155 224905c7d0de04b24e8128c6204e6efe 110 SMART SM00418 8 89 2.5E-10 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS21155 224905c7d0de04b24e8128c6204e6efe 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 5.9E-9 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS21155 224905c7d0de04b24e8128c6204e6efe 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 5.9E-9 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS21155 224905c7d0de04b24e8128c6204e6efe 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 5.9E-9 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07270 d0da5af1771a55564368f718c4b99ede 172 SMART SM00731 20 170 1.5E-47 T 06-07-2017 IPR006640 SprT-like AM402_RS07270 d0da5af1771a55564368f718c4b99ede 172 Hamap MF_00746 Protein SprT [sprT]. 16 170 38.673 T 06-07-2017 IPR023483 Uncharacterised protein family SprT AM402_RS07270 d0da5af1771a55564368f718c4b99ede 172 Pfam PF10263 SprT-like family 23 169 1.0E-25 T 06-07-2017 IPR006640 SprT-like AM402_RS11205 5f0d63fdfd1dce03c6f010748a1a9295 349 Gene3D G3DSA:3.20.20.70 8 348 4.8E-147 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS11205 5f0d63fdfd1dce03c6f010748a1a9295 349 Pfam PF00793 DAHP synthetase I family 40 337 2.2E-101 T 06-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM402_RS11205 5f0d63fdfd1dce03c6f010748a1a9295 349 PIRSF PIRSF001361 1 349 6.0E-158 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM402_RS11205 5f0d63fdfd1dce03c6f010748a1a9295 349 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 6.6E-167 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM402_RS11205 5f0d63fdfd1dce03c6f010748a1a9295 349 SUPERFAMILY SSF51569 7 347 6.38E-130 T 06-07-2017 AM402_RS19820 8e62d2a739c1d4f68dba45fca796c0b9 1267 Pfam PF13116 Protein of unknown function 502 783 1.4E-90 T 06-07-2017 IPR025263 Domain of unknown function DUF3971 AM402_RS19820 8e62d2a739c1d4f68dba45fca796c0b9 1267 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1263 0.0 T 06-07-2017 IPR011836 Conserved hypothetical protein CHP02099 AM402_RS19820 8e62d2a739c1d4f68dba45fca796c0b9 1267 Pfam PF13502 AsmA-like C-terminal region 1009 1253 1.6E-60 T 06-07-2017 IPR032712 AsmA-like, C-terminal AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 Pfam PF13183 4Fe-4S dicluster domain 309 376 2.9E-10 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 Gene3D G3DSA:3.40.50.10420 189 293 6.5E-52 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 Gene3D G3DSA:3.40.50.10420 65 128 6.5E-52 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 Pfam PF11870 Domain of unknown function (DUF3390) 384 469 3.4E-10 T 06-07-2017 IPR024569 4Fe-4S binding protein, C-terminal AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 72 294 1.1E-54 T 06-07-2017 IPR003741 LUD domain AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 SUPERFAMILY SSF46548 279 392 2.62E-19 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 Gene3D G3DSA:1.10.1060.10 294 398 2.5E-13 T 06-07-2017 AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 SUPERFAMILY SSF100950 135 295 3.72E-40 T 06-07-2017 AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 SUPERFAMILY SSF100950 64 89 3.72E-40 T 06-07-2017 AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 362 373 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS02405 f4768c1662c8d372703e290b828f8852 472 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 19 453 1.3E-206 T 06-07-2017 IPR004452 4Fe-4S binding protein GO:0019516 AM402_RS16950 b65b8c5a34db13a3ac14521599b4483c 216 SUPERFAMILY SSF46785 4 84 9.47E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16950 b65b8c5a34db13a3ac14521599b4483c 216 Pfam PF07729 FCD domain 78 190 8.6E-21 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS16950 b65b8c5a34db13a3ac14521599b4483c 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 57 1.0E-13 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS16950 b65b8c5a34db13a3ac14521599b4483c 216 SMART SM00895 74 192 9.9E-13 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS16950 b65b8c5a34db13a3ac14521599b4483c 216 SMART SM00345 7 64 1.5E-6 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS16950 b65b8c5a34db13a3ac14521599b4483c 216 Gene3D G3DSA:1.20.120.530 67 202 1.2E-25 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS16950 b65b8c5a34db13a3ac14521599b4483c 216 Gene3D G3DSA:1.10.10.10 6 65 5.3E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16950 b65b8c5a34db13a3ac14521599b4483c 216 SUPERFAMILY SSF48008 70 199 9.94E-22 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 SUPERFAMILY SSF82689 1016 1116 9.81E-28 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 SUPERFAMILY SSF50182 949 1014 8.5E-17 T 06-07-2017 IPR010920 LSM domain AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 Gene3D G3DSA:3.30.70.100 1019 1103 2.0E-24 T 06-07-2017 AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 SUPERFAMILY SSF82861 864 947 4.18E-7 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 Gene3D G3DSA:2.30.30.60 964 1013 1.6E-17 T 06-07-2017 AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 978 1012 - T 06-07-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 Pfam PF12795 Mechanosensitive ion channel porin domain 53 292 2.1E-51 T 06-07-2017 IPR024393 Mechanosensitive ion channel MscS, porin domain AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 523 845 6.9E-100 T 06-07-2017 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AM402_RS18765 40416776491aa5e5ee580b50e8e36152 1142 Pfam PF00924 Mechanosensitive ion channel 906 1105 1.9E-56 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM402_RS16760 7aaec84a160b709c50d0abf486d754f0 167 SUPERFAMILY SSF52833 40 158 7.96E-25 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS16760 7aaec84a160b709c50d0abf486d754f0 167 Gene3D G3DSA:3.40.30.10 14 154 1.2E-23 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS16760 7aaec84a160b709c50d0abf486d754f0 167 Pfam PF00578 AhpC/TSA family 43 138 3.0E-11 T 06-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS12775 2d25deb6354490eec22c8f5f28a1f6bb 464 PIRSF PIRSF006060 1 463 9.2E-48 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS12775 2d25deb6354490eec22c8f5f28a1f6bb 464 Pfam PF13520 Amino acid permease 5 445 2.6E-70 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS12775 2d25deb6354490eec22c8f5f28a1f6bb 464 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 461 3.1E-165 T 06-07-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM402_RS10975 076f979ae9c6d389d4c3ba7e9be5b8d1 186 Gene3D G3DSA:2.60.40.1090 32 186 2.6E-43 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS10975 076f979ae9c6d389d4c3ba7e9be5b8d1 186 Pfam PF00419 Fimbrial protein 34 185 6.2E-20 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS10975 076f979ae9c6d389d4c3ba7e9be5b8d1 186 SUPERFAMILY SSF49401 33 186 2.58E-37 T 06-07-2017 IPR008966 Adhesion domain AM402_RS01745 69b2b9b53881e9982cf68c4b3ebc613c 259 Pfam PF00535 Glycosyl transferase family 2 8 132 6.6E-16 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM402_RS01745 69b2b9b53881e9982cf68c4b3ebc613c 259 Gene3D G3DSA:3.90.550.10 2 131 2.7E-17 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS01745 69b2b9b53881e9982cf68c4b3ebc613c 259 SUPERFAMILY SSF53448 3 149 1.78E-26 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 SUPERFAMILY SSF52540 458 704 4.22E-87 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 ProSitePatterns PS00211 ABC transporters family signature. 606 620 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 23 705 1.0E-260 T 06-07-2017 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 Gene3D G3DSA:1.20.1560.10 142 452 1.6E-67 T 06-07-2017 AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 SMART SM00382 494 680 1.0E-21 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 SUPERFAMILY SSF90123 141 452 1.96E-61 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 Pfam PF00664 ABC transporter transmembrane region 154 422 4.2E-43 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 Pfam PF00005 ABC transporter 486 634 1.6E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS07635 2c9a07b1ef896706aed007ebd32a5619 707 Gene3D G3DSA:3.40.50.300 467 699 5.2E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10575 0e657be22570dc1fb2ade06a780538dc 327 SUPERFAMILY SSF88659 22 55 1.01E-5 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS10575 0e657be22570dc1fb2ade06a780538dc 327 Pfam PF04198 Putative sugar-binding domain 66 324 1.3E-69 T 06-07-2017 IPR007324 Sugar-binding domain, putative GO:0030246 AM402_RS10575 0e657be22570dc1fb2ade06a780538dc 327 Gene3D G3DSA:3.40.50.1360 63 325 5.6E-71 T 06-07-2017 AM402_RS10575 0e657be22570dc1fb2ade06a780538dc 327 SUPERFAMILY SSF100950 66 325 1.05E-62 T 06-07-2017 AM402_RS10575 0e657be22570dc1fb2ade06a780538dc 327 Gene3D G3DSA:1.10.10.10 22 55 3.5E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 384 464 4.1E-25 T 06-07-2017 IPR032859 GTPase Der, C-terminal KH-domain-like AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 SUPERFAMILY SSF52540 4 176 1.41E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 SUPERFAMILY SSF52540 208 471 7.22E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 Gene3D G3DSA:3.30.300.20 390 465 2.6E-22 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 464 2.2E-177 T 06-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 Pfam PF01926 50S ribosome-binding GTPase 5 119 7.2E-27 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 Pfam PF01926 50S ribosome-binding GTPase 211 328 2.3E-24 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.4E-10 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.4E-10 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 PIRSF PIRSF006485 1 472 5.6E-179 T 06-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 Gene3D G3DSA:3.40.50.300 209 389 5.6E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 Gene3D G3DSA:3.40.50.300 2 162 4.0E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 Hamap MF_00195 GTPase Der [der]. 2 467 38.974 T 06-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 6.3E-23 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS08660 0d30ecb325743f6fc8f6c89b70794cd4 496 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 209 373 7.9E-24 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS10125 6247b78a0e45184903d3012363ddff04 209 SUPERFAMILY SSF53328 2 200 3.66E-67 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS10125 6247b78a0e45184903d3012363ddff04 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.43 T 06-07-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM402_RS10125 6247b78a0e45184903d3012363ddff04 209 Gene3D G3DSA:3.40.50.170 1 196 2.5E-72 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS10125 6247b78a0e45184903d3012363ddff04 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 1.3E-77 T 06-07-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM402_RS10125 6247b78a0e45184903d3012363ddff04 209 Pfam PF00551 Formyl transferase 2 182 1.4E-62 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS10125 6247b78a0e45184903d3012363ddff04 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 06-07-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS14270 70be58ba939c8205c4cc3ac0384770d6 224 SMART SM00448 1 112 5.6E-38 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS14270 70be58ba939c8205c4cc3ac0384770d6 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 7.0E-23 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS14270 70be58ba939c8205c4cc3ac0384770d6 224 Gene3D G3DSA:1.10.10.10 135 222 5.6E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14270 70be58ba939c8205c4cc3ac0384770d6 224 SMART SM00862 145 220 2.1E-21 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS14270 70be58ba939c8205c4cc3ac0384770d6 224 SUPERFAMILY SSF52172 1 180 7.54E-38 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS14270 70be58ba939c8205c4cc3ac0384770d6 224 Gene3D G3DSA:3.40.50.2300 1 134 1.6E-36 T 06-07-2017 AM402_RS14270 70be58ba939c8205c4cc3ac0384770d6 224 Pfam PF00072 Response regulator receiver domain 3 113 8.5E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 SMART SM00354 1 73 7.4E-32 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 06-07-2017 AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 Gene3D G3DSA:3.40.50.2300 157 332 7.5E-37 T 06-07-2017 AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 Gene3D G3DSA:3.40.50.2300 63 152 2.3E-28 T 06-07-2017 AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 SUPERFAMILY SSF47413 2 58 9.57E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 SUPERFAMILY SSF53822 60 315 2.55E-44 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 Pfam PF13407 Periplasmic binding protein domain 64 308 9.0E-14 T 06-07-2017 IPR025997 Periplasmic binding protein AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 6.6E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 Gene3D G3DSA:1.10.260.40 1 62 1.1E-24 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS07395 79f9d12e6b1e9289fd56808163724caf 335 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 4.4E-146 T 06-07-2017 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 SUPERFAMILY SSF51419 68 345 1.44E-67 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 SUPERFAMILY SSF50621 459 571 4.19E-7 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 75 344 1.0E-68 T 06-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 391 561 1.8E-22 T 06-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 Gene3D G3DSA:2.40.37.10 455 587 1.5E-12 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 Gene3D G3DSA:2.40.37.10 332 356 1.5E-12 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 122 134 3.8E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 100 118 3.8E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 239 252 3.8E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 542 555 3.8E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 333 352 3.8E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 146 161 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 196 218 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 68 83 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 172 193 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 323 340 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 92 106 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 542 563 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 489 514 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PRINTS PR01180 Arginine decarboxylase signature 464 485 8.9E-71 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 100 118 - T 06-07-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 633 41.775 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 277 290 - T 06-07-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 Gene3D G3DSA:3.20.20.10 70 331 3.9E-60 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 PIRSF PIRSF001336 2 634 5.4E-249 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS07325 eb26c36a29df9e45b030e775b7c73002 635 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 632 2.0E-264 T 06-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 6.7E-12 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 6.7E-12 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 6.7E-12 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 168 - T 06-07-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 3.3E-61 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 SUPERFAMILY SSF51569 2 291 3.56E-81 T 06-07-2017 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 PIRSF PIRSF001365 1 298 3.0E-74 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 Gene3D G3DSA:3.20.20.70 1 292 1.8E-84 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS12555 6c1918e3834d565db09f81a21c090437 303 SMART SM01130 3 293 5.4E-87 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS02945 5589e1dd6678f0ad928b38b1a323d374 309 SUPERFAMILY SSF51569 4 274 1.78E-49 T 06-07-2017 AM402_RS02945 5589e1dd6678f0ad928b38b1a323d374 309 Gene3D G3DSA:3.20.20.70 1 276 2.6E-54 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS02945 5589e1dd6678f0ad928b38b1a323d374 309 SMART SM01130 5 299 8.7E-30 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS02945 5589e1dd6678f0ad928b38b1a323d374 309 Pfam PF00701 Dihydrodipicolinate synthetase family 7 243 7.1E-24 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS02945 5589e1dd6678f0ad928b38b1a323d374 309 PIRSF PIRSF001365 1 286 1.6E-46 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 TIGRFAM TIGR00492 alr: alanine racemase 3 352 5.4E-113 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 SMART SM01005 231 355 9.1E-69 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 Pfam PF00842 Alanine racemase, C-terminal domain 231 351 1.3E-40 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 Pfam PF01168 Alanine racemase, N-terminal domain 9 216 1.1E-57 T 06-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 264 279 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 61 79 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 285 302 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 247 262 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 27 43 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 155 166 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 121 133 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 189 216 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 PRINTS PR00992 Alanine racemase signature 337 350 1.5E-69 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 06-07-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 SUPERFAMILY SSF51419 9 232 8.34E-59 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS10775 37353138e452671ebd4175749917b6e0 370 Hamap MF_01201 Alanine racemase. 2 355 33.115 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 Gene3D G3DSA:3.20.20.10 11 208 7.4E-59 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS10775 37353138e452671ebd4175749917b6e0 370 Gene3D G3DSA:2.40.37.10 209 352 5.1E-57 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS10775 37353138e452671ebd4175749917b6e0 370 SUPERFAMILY SSF50621 225 351 1.08E-47 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 SUPERFAMILY SSF48230 236 617 1.83E-152 T 06-07-2017 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 SUPERFAMILY SSF49785 26 233 2.64E-79 T 06-07-2017 IPR008979 Galactose-binding domain-like AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 901 961 3.3E-8 T 06-07-2017 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 PIRSF PIRSF034515 1 1021 0.0 T 06-07-2017 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 SUPERFAMILY SSF74650 619 895 1.57E-87 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 Gene3D G3DSA:2.60.220.10 900 1019 1.2E-40 T 06-07-2017 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 Pfam PF09093 Lyase, catalytic 244 603 1.0E-133 T 06-07-2017 IPR015177 Lyase, catalytic AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 625 878 1.2E-38 T 06-07-2017 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 Gene3D G3DSA:2.70.98.10 619 893 2.6E-88 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 Pfam PF09092 Lyase, N terminal 38 231 1.7E-59 T 06-07-2017 IPR015176 Lyase, N-terminal AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 Gene3D G3DSA:1.50.10.100 236 617 3.0E-140 T 06-07-2017 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 SUPERFAMILY SSF49863 900 1019 6.28E-39 T 06-07-2017 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 AM402_RS07170 ca0ff4235ad1e449acf55dbfaf5ae791 1021 Gene3D G3DSA:2.60.120.410 28 232 5.2E-76 T 06-07-2017 IPR015176 Lyase, N-terminal AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 807 0.0 T 06-07-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 Pfam PF00271 Helicase conserved C-terminal domain 208 327 4.5E-10 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 Pfam PF08482 ATP-dependent helicase C-terminal 664 796 1.0E-48 T 06-07-2017 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 SMART SM00487 2 191 8.1E-23 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 PIRSF PIRSF005496 1 809 9.2E-295 T 06-07-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 SUPERFAMILY SSF52540 4 437 3.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 Gene3D G3DSA:3.40.50.300 186 342 1.2E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 SMART SM00847 388 479 3.0E-8 T 06-07-2017 IPR007502 Helicase-associated domain GO:0004386 AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 Pfam PF04408 Helicase associated domain (HA2) 389 447 5.3E-10 T 06-07-2017 IPR007502 Helicase-associated domain GO:0004386 AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 Gene3D G3DSA:3.40.50.300 4 160 4.8E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 Pfam PF00270 DEAD/DEAH box helicase 19 164 3.7E-11 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS18460 1621c86510f036b2a94a3287cec20761 809 SMART SM00490 226 328 2.1E-12 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 SUPERFAMILY SSF46689 7 65 3.54E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 72 208 4.1E-24 T 06-07-2017 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 2.1E-12 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 Gene3D G3DSA:1.10.357.10 72 209 1.2E-31 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 SUPERFAMILY SSF48498 72 209 8.12E-28 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 Gene3D G3DSA:1.10.10.60 4 65 4.8E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 PRINTS PR00400 Tetracycline repressor protein signature 23 46 3.6E-21 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 PRINTS PR00400 Tetracycline repressor protein signature 75 94 3.6E-21 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 PRINTS PR00400 Tetracycline repressor protein signature 191 205 3.6E-21 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 PRINTS PR00400 Tetracycline repressor protein signature 131 150 3.6E-21 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 PRINTS PR00400 Tetracycline repressor protein signature 95 118 3.6E-21 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.9E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS02140 2cea366490d9ed43c7f24dfff2277eb6 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.9E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 SUPERFAMILY SSF51905 9 322 1.12E-44 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 484 3.0E-9 T 06-07-2017 IPR007419 BFD-like [2Fe-2S]-binding domain AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 Pfam PF01266 FAD dependent oxidoreductase 10 358 5.9E-48 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 1.5E-21 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 1.5E-21 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 1.5E-21 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 1.5E-21 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 1.5E-21 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 536 1.9E-261 T 06-07-2017 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM402_RS20065 7b6692e30a92d4e47068fe5f2b9457f0 551 Gene3D G3DSA:3.50.50.60 6 249 1.4E-41 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS18235 a5563a0e6cdb229a7fb700ede5c9b306 145 SMART SM00347 22 122 1.1E-21 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS18235 a5563a0e6cdb229a7fb700ede5c9b306 145 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 1.0E-53 T 06-07-2017 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 AM402_RS18235 a5563a0e6cdb229a7fb700ede5c9b306 145 SUPERFAMILY SSF46785 4 135 4.92E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS18235 a5563a0e6cdb229a7fb700ede5c9b306 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 06-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site AM402_RS18235 a5563a0e6cdb229a7fb700ede5c9b306 145 Pfam PF01047 MarR family 29 86 6.1E-11 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS18235 a5563a0e6cdb229a7fb700ede5c9b306 145 Gene3D G3DSA:1.10.10.10 3 133 1.9E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 06-07-2017 IPR019844 Cold-shock conserved site AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 SMART SM00357 6 70 5.5E-28 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 Gene3D G3DSA:2.40.50.140 5 68 1.3E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 SUPERFAMILY SSF50249 4 69 3.64E-24 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 6.4E-31 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 PRINTS PR00050 Cold shock protein signature 43 61 3.0E-16 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 PRINTS PR00050 Cold shock protein signature 7 22 3.0E-16 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 PRINTS PR00050 Cold shock protein signature 28 37 3.0E-16 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13685 f5b047ca9829a4c3510a60c7a22f0b0b 70 PIRSF PIRSF002599 1 70 1.7E-23 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 503 596 4.5E-25 T 06-07-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 17 721 0.0 T 06-07-2017 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 Pfam PF00378 Enoyl-CoA hydratase/isomerase 27 231 7.9E-45 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 500 525 - T 06-07-2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 Gene3D G3DSA:1.10.1040.10 640 720 3.8E-22 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 321 500 4.4E-53 T 06-07-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 SUPERFAMILY SSF48179 502 600 1.11E-28 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 Gene3D G3DSA:3.40.50.720 314 504 2.1E-52 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 SUPERFAMILY SSF48179 629 721 1.62E-24 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 SUPERFAMILY SSF52096 16 310 5.81E-71 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 SUPERFAMILY SSF51735 320 502 1.1E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 Gene3D G3DSA:3.90.226.10 4 224 2.2E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS08885 79471b417d85ba4e3bff8ea24ded05f5 722 Gene3D G3DSA:1.10.1040.10 505 597 1.5E-26 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS15505 87b942158a4c46fd9b074bb999b13975 1280 Pfam PF09397 Ftsk gamma domain 1214 1273 4.8E-27 T 06-07-2017 IPR018541 FtsK gamma domain AM402_RS15505 87b942158a4c46fd9b074bb999b13975 1280 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 2.8E-47 T 06-07-2017 IPR025199 DNA translocase FtsK, 4TM region AM402_RS15505 87b942158a4c46fd9b074bb999b13975 1280 Gene3D G3DSA:3.40.50.300 871 1176 2.7E-97 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15505 87b942158a4c46fd9b074bb999b13975 1280 Gene3D G3DSA:2.60.200.20 739 773 4.7E-4 T 06-07-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AM402_RS15505 87b942158a4c46fd9b074bb999b13975 1280 Pfam PF01580 FtsK/SpoIIIE family 897 1110 3.6E-72 T 06-07-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AM402_RS15505 87b942158a4c46fd9b074bb999b13975 1280 SUPERFAMILY SSF46785 1212 1276 4.35E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS15505 87b942158a4c46fd9b074bb999b13975 1280 SUPERFAMILY SSF52540 871 1179 2.25E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15505 87b942158a4c46fd9b074bb999b13975 1280 SMART SM00843 1212 1277 3.8E-38 T 06-07-2017 IPR018541 FtsK gamma domain AM402_RS02185 3456f42e6e706664230172f174bb1d99 358 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 13 358 7.0E-151 T 06-07-2017 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 AM402_RS02185 3456f42e6e706664230172f174bb1d99 358 Gene3D G3DSA:3.40.50.300 14 244 4.3E-79 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02185 3456f42e6e706664230172f174bb1d99 358 SUPERFAMILY SSF52540 16 252 2.18E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02185 3456f42e6e706664230172f174bb1d99 358 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS02185 3456f42e6e706664230172f174bb1d99 358 SMART SM00382 40 221 3.2E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS02185 3456f42e6e706664230172f174bb1d99 358 Pfam PF00005 ABC transporter 31 171 1.4E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS02185 3456f42e6e706664230172f174bb1d99 358 SUPERFAMILY SSF50331 248 357 5.67E-7 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 4.5E-21 T 06-07-2017 AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 Gene3D G3DSA:3.30.70.920 65 161 5.8E-33 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 2.8E-24 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 Gene3D G3DSA:1.10.10.10 13 64 2.9E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 06-07-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 SUPERFAMILY SSF46785 12 70 7.86E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 SMART SM00344 12 121 1.3E-53 T 06-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM402_RS15510 804fca13ea4e1e3a0fb07964e2b015ef 164 SUPERFAMILY SSF54909 74 157 1.34E-21 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS07840 339f3b75df145036fc2cf96504f4c5a3 222 Pfam PF05944 Phage small terminase subunit 36 164 1.5E-45 T 06-07-2017 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AM402_RS12120 e554f1d719885f78059d8c20a97a1ece 199 Pfam PF00925 GTP cyclohydrolase II 4 170 1.3E-68 T 06-07-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM402_RS12120 e554f1d719885f78059d8c20a97a1ece 199 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 47.891 T 06-07-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM402_RS12120 e554f1d719885f78059d8c20a97a1ece 199 SUPERFAMILY SSF142695 3 173 3.27E-65 T 06-07-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM402_RS12120 e554f1d719885f78059d8c20a97a1ece 199 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 2.1E-92 T 06-07-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 Gene3D G3DSA:3.50.50.60 259 344 4.5E-28 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 Gene3D G3DSA:3.50.50.60 578 664 4.5E-28 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 Gene3D G3DSA:3.50.50.60 400 484 4.5E-28 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 Pfam PF01266 FAD dependent oxidoreductase 266 642 6.2E-43 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 SUPERFAMILY SSF51905 263 547 2.72E-32 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 242 3.7E-45 T 06-07-2017 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 672 1.4E-147 T 06-07-2017 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 667 27.138 T 06-07-2017 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 AM402_RS08940 08bb17be4d1f4260e5955afbd16aad63 679 Gene3D G3DSA:3.40.50.150 11 248 2.1E-99 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 SUPERFAMILY SSF52283 7 137 2.34E-50 T 06-07-2017 AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 Gene3D G3DSA:3.40.50.720 8 120 1.5E-36 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 06-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 SUPERFAMILY SSF51735 108 298 7.47E-57 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 329 3.6E-37 T 06-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 297 1.8E-50 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 SUPERFAMILY SSF55021 342 415 7.91E-16 T 06-07-2017 AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 Gene3D G3DSA:3.40.50.720 121 300 9.1E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07630 d15254d9de700b88df1673f90faad71c 416 Gene3D G3DSA:3.30.70.260 327 415 2.3E-26 T 06-07-2017 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 Gene3D G3DSA:1.20.5.1030 65 123 1.2E-24 T 06-07-2017 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 PRINTS PR01650 Bacterial translocase SecE signature 44 65 7.8E-39 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 PRINTS PR01650 Bacterial translocase SecE signature 89 109 7.8E-39 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 PRINTS PR01650 Bacterial translocase SecE signature 65 85 7.8E-39 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 PRINTS PR01650 Bacterial translocase SecE signature 109 125 7.8E-39 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 1.7E-20 T 06-07-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 123 4.9E-17 T 06-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.076 T 06-07-2017 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS03650 15d7e6f76e830eacd5d366afc7e85536 125 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 06-07-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS10150 7f2ee9c08919a84e493bb99a42255616 235 SUPERFAMILY SSF52540 15 214 1.98E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10150 7f2ee9c08919a84e493bb99a42255616 235 Gene3D G3DSA:3.40.50.300 4 166 1.1E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10150 7f2ee9c08919a84e493bb99a42255616 235 Gene3D G3DSA:1.10.8.60 169 234 2.1E-29 T 06-07-2017 AM402_RS10150 7f2ee9c08919a84e493bb99a42255616 235 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 7 235 54.771 T 06-07-2017 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae AM402_RS10150 7f2ee9c08919a84e493bb99a42255616 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 133 160 2.9E-6 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AM402_RS10150 7f2ee9c08919a84e493bb99a42255616 235 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 45 65 2.9E-6 T 06-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AM402_RS10150 7f2ee9c08919a84e493bb99a42255616 235 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 8 234 4.7E-84 T 06-07-2017 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AM402_RS10150 7f2ee9c08919a84e493bb99a42255616 235 Pfam PF00308 Bacterial dnaA protein 18 213 7.0E-18 T 06-07-2017 IPR013317 Chromosomal replication initiator protein DnaA AM402_RS05665 87a9a88d9d0876c03379b655c513fdfc 354 SUPERFAMILY SSF82549 10 352 2.41E-125 T 06-07-2017 AM402_RS05665 87a9a88d9d0876c03379b655c513fdfc 354 Gene3D G3DSA:3.40.50.10440 12 183 1.4E-69 T 06-07-2017 AM402_RS05665 87a9a88d9d0876c03379b655c513fdfc 354 Gene3D G3DSA:3.30.1180.20 186 352 1.7E-64 T 06-07-2017 AM402_RS05665 87a9a88d9d0876c03379b655c513fdfc 354 Pfam PF02733 Dak1 domain 17 351 6.3E-127 T 06-07-2017 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM402_RS05665 87a9a88d9d0876c03379b655c513fdfc 354 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 351 2.7E-148 T 06-07-2017 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 116 129 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 285 311 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 Pfam PF04545 Sigma-70, region 4 260 312 9.5E-16 T 06-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 PRINTS PR00046 Major sigma-70 factor signature 285 300 1.2E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 PRINTS PR00046 Major sigma-70 factor signature 116 129 1.2E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 PRINTS PR00046 Major sigma-70 factor signature 140 148 1.2E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 PRINTS PR00046 Major sigma-70 factor signature 300 311 1.2E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 PRINTS PR00046 Major sigma-70 factor signature 264 276 1.2E-27 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 Gene3D G3DSA:1.10.10.10 255 320 1.8E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 89 314 1.3E-35 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 Gene3D G3DSA:1.10.601.10 30 161 1.8E-52 T 06-07-2017 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 49 326 5.6E-140 T 06-07-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 SUPERFAMILY SSF88659 222 319 1.8E-23 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 Pfam PF04539 Sigma-70 region 3 172 246 9.1E-21 T 06-07-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 Pfam PF04542 Sigma-70 region 2 92 161 2.3E-20 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 SUPERFAMILY SSF88659 165 239 2.7E-15 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 SUPERFAMILY SSF88946 54 162 2.2E-44 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 1 326 39.3 T 06-07-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 Pfam PF00140 Sigma-70 factor, region 1.2 54 85 2.5E-10 T 06-07-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06515 a84d1bc2c02518370e1c600a885e8402 329 Gene3D G3DSA:1.10.10.10 165 214 7.9E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS17305 5ce5160b0bfb78554037772c4a30461b 210 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 74 91 1.5E-10 T 06-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM402_RS17305 5ce5160b0bfb78554037772c4a30461b 210 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 154 1.5E-10 T 06-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM402_RS17305 5ce5160b0bfb78554037772c4a30461b 210 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 155 170 1.5E-10 T 06-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM402_RS17305 5ce5160b0bfb78554037772c4a30461b 210 Pfam PF01478 Type IV leader peptidase family 66 173 5.0E-17 T 06-07-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AM402_RS16135 e136097ae15ec0577225cbf14fab44fa 297 SUPERFAMILY SSF53850 89 296 1.71E-35 T 06-07-2017 AM402_RS16135 e136097ae15ec0577225cbf14fab44fa 297 SUPERFAMILY SSF46785 4 113 1.16E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16135 e136097ae15ec0577225cbf14fab44fa 297 Pfam PF03466 LysR substrate binding domain 89 292 1.2E-36 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS16135 e136097ae15ec0577225cbf14fab44fa 297 Gene3D G3DSA:1.10.10.10 4 85 1.2E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16135 e136097ae15ec0577225cbf14fab44fa 297 Gene3D G3DSA:3.40.190.10 177 260 3.1E-11 T 06-07-2017 AM402_RS16135 e136097ae15ec0577225cbf14fab44fa 297 Gene3D G3DSA:3.40.190.10 93 176 9.3E-20 T 06-07-2017 AM402_RS16135 e136097ae15ec0577225cbf14fab44fa 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.7E-19 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS05480 32fcaa11cc81cfcbaf7c479c6082107b 551 SMART SM00327 376 549 1.8E-6 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS05480 32fcaa11cc81cfcbaf7c479c6082107b 551 Pfam PF00092 von Willebrand factor type A domain 381 519 2.1E-6 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS05480 32fcaa11cc81cfcbaf7c479c6082107b 551 Gene3D G3DSA:3.40.50.410 380 518 2.1E-6 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS05480 32fcaa11cc81cfcbaf7c479c6082107b 551 Pfam PF06213 Cobalamin biosynthesis protein CobT 4 261 7.0E-14 T 06-07-2017 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AM402_RS05480 32fcaa11cc81cfcbaf7c479c6082107b 551 SUPERFAMILY SSF53300 377 536 2.08E-16 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 Pfam PF13616 PPIC-type PPIASE domain 175 286 1.2E-21 T 06-07-2017 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 334 355 - T 06-07-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 Gene3D G3DSA:3.10.50.40 184 291 2.8E-33 T 06-07-2017 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 Gene3D G3DSA:3.10.50.40 294 419 3.6E-35 T 06-07-2017 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 Pfam PF00639 PPIC-type PPIASE domain 302 395 2.9E-24 T 06-07-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 SUPERFAMILY SSF54534 296 397 3.92E-31 T 06-07-2017 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 Pfam PF09312 SurA N-terminal domain 38 155 1.7E-37 T 06-07-2017 IPR015391 SurA N-terminal AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 Hamap MF_01183 Chaperone SurA [surA]. 20 441 32.991 T 06-07-2017 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 SUPERFAMILY SSF54534 188 289 1.96E-29 T 06-07-2017 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 225 245 - T 06-07-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 AM402_RS06010 7cd0ed996bae2cbc8e44d8081b3edf27 445 SUPERFAMILY SSF109998 38 212 2.85E-36 T 06-07-2017 IPR027304 Trigger factor/SurA domain AM402_RS04675 df843d2aca84949c6dd16d37305ac712 362 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 8.4E-24 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM402_RS04675 df843d2aca84949c6dd16d37305ac712 362 PIRSF PIRSF017494 1 362 1.7E-148 T 06-07-2017 IPR010091 Thiazolinyl imide reductase AM402_RS04675 df843d2aca84949c6dd16d37305ac712 362 SUPERFAMILY SSF51735 6 139 1.38E-11 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS04675 df843d2aca84949c6dd16d37305ac712 362 Gene3D G3DSA:3.40.50.720 6 116 1.1E-7 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS04675 df843d2aca84949c6dd16d37305ac712 362 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 4 340 1.7E-104 T 06-07-2017 IPR010091 Thiazolinyl imide reductase AM402_RS15045 5e34aaec50e6bfea30ed1ff76b3b1b33 172 Gene3D G3DSA:3.10.129.10 2 169 1.1E-59 T 06-07-2017 IPR029069 HotDog domain AM402_RS15045 5e34aaec50e6bfea30ed1ff76b3b1b33 172 Pfam PF07977 FabA-like domain 29 159 1.1E-53 T 06-07-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS15045 5e34aaec50e6bfea30ed1ff76b3b1b33 172 SUPERFAMILY SSF54637 3 169 1.08E-56 T 06-07-2017 IPR029069 HotDog domain AM402_RS15045 5e34aaec50e6bfea30ed1ff76b3b1b33 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 50.907 T 06-07-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS15045 5e34aaec50e6bfea30ed1ff76b3b1b33 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.8E-92 T 06-07-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS10625 abb04ba4ae3cb9f5d3293ceba3e2afba 378 SUPERFAMILY SSF52540 228 367 1.5E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10625 abb04ba4ae3cb9f5d3293ceba3e2afba 378 Gene3D G3DSA:1.10.3210.10 30 179 5.4E-10 T 06-07-2017 IPR006674 HD domain AM402_RS10625 abb04ba4ae3cb9f5d3293ceba3e2afba 378 SUPERFAMILY SSF109604 17 167 1.34E-11 T 06-07-2017 AM402_RS10625 abb04ba4ae3cb9f5d3293ceba3e2afba 378 Gene3D G3DSA:3.40.50.300 228 362 1.6E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10625 abb04ba4ae3cb9f5d3293ceba3e2afba 378 Pfam PF01966 HD domain 42 164 2.4E-5 T 06-07-2017 IPR006674 HD domain AM402_RS10625 abb04ba4ae3cb9f5d3293ceba3e2afba 378 Pfam PF13671 AAA domain 229 358 2.7E-19 T 06-07-2017 AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 4 251 4.1E-130 T 06-07-2017 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 Gene3D G3DSA:3.40.50.720 4 250 7.1E-83 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.8E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.8E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.8E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.8E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.8E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.8E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.3E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.3E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.3E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 2.6E-58 T 06-07-2017 AM402_RS07145 9eb38eb10e3344e48081b21319b5de36 251 SUPERFAMILY SSF51735 8 250 1.76E-77 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19635 dffd2b5d7e76af4d01192c91e30b6f50 424 Pfam PF03606 C4-dicarboxylate anaerobic carrier 67 423 8.7E-18 T 06-07-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM402_RS19635 dffd2b5d7e76af4d01192c91e30b6f50 424 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 60 417 3.9E-66 T 06-07-2017 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AM402_RS08695 cf7c429cd51d4f4b34927c7d7091fe52 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 275 8.9E-35 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS08695 cf7c429cd51d4f4b34927c7d7091fe52 277 Gene3D G3DSA:1.10.3720.10 20 273 6.1E-56 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS08695 cf7c429cd51d4f4b34927c7d7091fe52 277 SUPERFAMILY SSF161098 18 263 1.96E-58 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS08695 cf7c429cd51d4f4b34927c7d7091fe52 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 8 269 5.8E-110 T 06-07-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM402_RS08695 cf7c429cd51d4f4b34927c7d7091fe52 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 270 2.8E-113 T 06-07-2017 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 Pfam PF07650 KH domain 38 111 2.7E-19 T 06-07-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.9E-41 T 06-07-2017 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.169 T 06-07-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 Gene3D G3DSA:3.30.1140.32 108 207 8.1E-48 T 06-07-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 SUPERFAMILY SSF54821 108 206 1.05E-40 T 06-07-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 06-07-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 Gene3D G3DSA:3.30.300.20 18 107 1.9E-33 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 SUPERFAMILY SSF54814 2 106 2.88E-37 T 06-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 SMART SM00322 60 125 3.6E-7 T 06-07-2017 IPR004087 K Homology domain GO:0003676 AM402_RS00975 0b1b4e620d8664a8c3ae6cf7595023e7 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.2E-99 T 06-07-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM402_RS09465 fe8c8c27a475749e0f83494fac7ceac6 221 Gene3D G3DSA:1.10.10.10 124 218 5.1E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09465 fe8c8c27a475749e0f83494fac7ceac6 221 Gene3D G3DSA:3.40.50.2300 1 119 3.9E-28 T 06-07-2017 AM402_RS09465 fe8c8c27a475749e0f83494fac7ceac6 221 Pfam PF00072 Response regulator receiver domain 3 112 3.9E-20 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09465 fe8c8c27a475749e0f83494fac7ceac6 221 SMART SM00448 1 112 4.7E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09465 fe8c8c27a475749e0f83494fac7ceac6 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 216 7.3E-18 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS09465 fe8c8c27a475749e0f83494fac7ceac6 221 SMART SM00862 145 216 1.3E-20 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS09465 fe8c8c27a475749e0f83494fac7ceac6 221 SUPERFAMILY SSF52172 1 172 5.51E-32 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 Gene3D G3DSA:3.40.50.300 456 640 1.1E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 SUPERFAMILY SSF52540 214 455 9.96E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 Pfam PF00271 Helicase conserved C-terminal domain 480 590 2.6E-18 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 SUPERFAMILY SSF52540 390 601 5.73E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 SMART SM00490 507 591 3.6E-23 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 Gene3D G3DSA:3.40.50.300 257 455 6.7E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 Pfam PF17191 RecG wedge domain 14 172 6.8E-21 T 06-07-2017 IPR033454 RecG, wedge domain AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 Pfam PF00270 DEAD/DEAH box helicase 274 435 5.5E-19 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 Gene3D G3DSA:1.10.150.20 5 37 2.5E-5 T 06-07-2017 AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 666 7.0E-241 T 06-07-2017 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 SMART SM00487 267 461 6.5E-32 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 Gene3D G3DSA:2.40.50.140 48 139 1.1E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS03280 6631270f8edc3ef7ceae23735a7b610a 695 SUPERFAMILY SSF50249 9 175 2.23E-41 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 Pfam PF04963 Sigma-54 factor, core binding domain 128 317 9.5E-60 T 06-07-2017 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 378 397 - T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 PRINTS PR00045 Sigma-54 factor signature 200 217 3.8E-32 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 PRINTS PR00045 Sigma-54 factor signature 406 417 3.8E-32 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 PRINTS PR00045 Sigma-54 factor signature 464 482 3.8E-32 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 PRINTS PR00045 Sigma-54 factor signature 390 402 3.8E-32 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 3.3E-16 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 PIRSF PIRSF000774 1 491 1.0E-155 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 Pfam PF04552 Sigma-54, DNA binding domain 331 488 3.9E-71 T 06-07-2017 IPR007634 RNA polymerase sigma factor 54, DNA-binding AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 488 8.7E-157 T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS19760 a2ebcf60f1be6b27956ea0c27343afcd 491 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 469 476 - T 06-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS02770 ba7ec8e574b19af0c75968e4b88e16d3 295 Gene3D G3DSA:3.40.50.10490 120 283 7.6E-44 T 06-07-2017 AM402_RS02770 ba7ec8e574b19af0c75968e4b88e16d3 295 Pfam PF01380 SIS domain 140 268 1.1E-23 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS02770 ba7ec8e574b19af0c75968e4b88e16d3 295 SUPERFAMILY SSF46689 13 87 3.23E-19 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02770 ba7ec8e574b19af0c75968e4b88e16d3 295 Pfam PF01418 Helix-turn-helix domain, rpiR family 14 87 1.2E-23 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM402_RS02770 ba7ec8e574b19af0c75968e4b88e16d3 295 SUPERFAMILY SSF53697 108 290 6.41E-43 T 06-07-2017 AM402_RS02770 ba7ec8e574b19af0c75968e4b88e16d3 295 Gene3D G3DSA:1.10.10.10 13 87 4.8E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06065 088fe9216dd4bb67eb6400510893f108 294 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 285 1.6E-100 T 06-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM402_RS06065 088fe9216dd4bb67eb6400510893f108 294 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 284 20.563 T 06-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM402_RS06065 088fe9216dd4bb67eb6400510893f108 294 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 279 3.1E-80 T 06-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM402_RS06065 088fe9216dd4bb67eb6400510893f108 294 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 06-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM402_RS20100 d7e2f1ac3acdbd6be7d2b9095a7f8ba2 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 119 3.0E-45 T 06-07-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 AM402_RS20100 d7e2f1ac3acdbd6be7d2b9095a7f8ba2 119 PIRSF PIRSF000179 1 119 3.2E-50 T 06-07-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 AM402_RS20100 d7e2f1ac3acdbd6be7d2b9095a7f8ba2 119 SUPERFAMILY SSF81343 3 119 3.4E-50 T 06-07-2017 AM402_RS20100 d7e2f1ac3acdbd6be7d2b9095a7f8ba2 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 119 26.898 T 06-07-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 AM402_RS20100 d7e2f1ac3acdbd6be7d2b9095a7f8ba2 119 Gene3D G3DSA:1.20.1300.10 3 119 3.6E-50 T 06-07-2017 AM402_RS20100 d7e2f1ac3acdbd6be7d2b9095a7f8ba2 119 Pfam PF02313 Fumarate reductase subunit D 7 117 4.2E-48 T 06-07-2017 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 AM402_RS11075 98610e9574ed863948222ea6e8441bd0 145 PIRSF PIRSF006276 1 145 1.3E-19 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS11075 98610e9574ed863948222ea6e8441bd0 145 Gene3D G3DSA:3.40.50.620 2 145 4.7E-33 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS11075 98610e9574ed863948222ea6e8441bd0 145 Pfam PF00582 Universal stress protein family 1 145 1.1E-26 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS11075 98610e9574ed863948222ea6e8441bd0 145 PRINTS PR01438 Universal stress protein signature 123 145 6.3E-12 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS11075 98610e9574ed863948222ea6e8441bd0 145 PRINTS PR01438 Universal stress protein signature 2 20 6.3E-12 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS11075 98610e9574ed863948222ea6e8441bd0 145 PRINTS PR01438 Universal stress protein signature 106 118 6.3E-12 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS11075 98610e9574ed863948222ea6e8441bd0 145 SUPERFAMILY SSF52402 2 145 1.34E-30 T 06-07-2017 AM402_RS16215 e4e723ea598212c0fb378739e8f2fca8 1242 SUPERFAMILY SSF48371 575 676 4.22E-10 T 06-07-2017 IPR016024 Armadillo-type fold GO:0005488 AM402_RS16215 e4e723ea598212c0fb378739e8f2fca8 1242 SUPERFAMILY SSF48371 215 350 4.22E-10 T 06-07-2017 IPR016024 Armadillo-type fold GO:0005488 AM402_RS16215 e4e723ea598212c0fb378739e8f2fca8 1242 SUPERFAMILY SSF48371 850 917 4.22E-10 T 06-07-2017 IPR016024 Armadillo-type fold GO:0005488 AM402_RS16215 e4e723ea598212c0fb378739e8f2fca8 1242 Pfam PF13646 HEAT repeats 621 674 6.3E-7 T 06-07-2017 AM402_RS16215 e4e723ea598212c0fb378739e8f2fca8 1242 Gene3D G3DSA:1.25.10.10 543 706 5.8E-7 T 06-07-2017 IPR011989 Armadillo-like helical AM402_RS16215 e4e723ea598212c0fb378739e8f2fca8 1242 Pfam PF13569 Domain of unknown function (DUF4132) 963 1144 9.5E-40 T 06-07-2017 IPR025406 Domain of unknown function DUF4132 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 2.1E-75 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 2.1E-75 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 2.1E-75 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 62 77 2.1E-75 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 2.1E-75 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 214 2.1E-75 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 2.1E-75 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 SMART SM00283 270 517 8.9E-93 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 295 317 - T 06-07-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 SUPERFAMILY SSF47170 44 177 9.29E-26 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 516 3.8E-62 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 SUPERFAMILY SSF58104 239 518 5.62E-74 T 06-07-2017 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 Gene3D G3DSA:1.10.287.950 285 489 1.4E-62 T 06-07-2017 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 SMART SM00304 217 269 6.3E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 SMART SM00319 46 183 1.2E-6 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 Pfam PF00672 HAMP domain 199 265 2.3E-6 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 Pfam PF02203 Tar ligand binding domain homologue 4 173 9.3E-32 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS09630 2d29b6a1ba5894cfa2dc370fa18dc83c 548 Gene3D G3DSA:1.20.120.30 39 179 1.0E-28 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS03615 e3bd82fbe5111322b525b3526d67183a 130 SUPERFAMILY SSF75169 1 130 1.49E-36 T 06-07-2017 IPR027396 DsrEFH-like AM402_RS03615 e3bd82fbe5111322b525b3526d67183a 130 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 3 130 36.604 T 06-07-2017 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM402_RS03615 e3bd82fbe5111322b525b3526d67183a 130 Pfam PF02635 DsrE/DsrF-like family 5 130 1.6E-27 T 06-07-2017 IPR003787 Sulphur relay, DsrE/F-like protein AM402_RS03615 e3bd82fbe5111322b525b3526d67183a 130 Gene3D G3DSA:3.40.1260.10 4 130 5.6E-28 T 06-07-2017 IPR027396 DsrEFH-like AM402_RS03615 e3bd82fbe5111322b525b3526d67183a 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 130 1.7E-52 T 06-07-2017 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 Gene3D G3DSA:1.10.240.10 238 321 2.7E-43 T 06-07-2017 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 4.4E-32 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 4.4E-32 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 4.4E-32 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 4.4E-32 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 SUPERFAMILY SSF55174 327 423 5.76E-21 T 06-07-2017 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 SMART SM00363 359 419 0.0011 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 Pfam PF01479 S4 domain 359 402 3.6E-6 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 45.903 T 06-07-2017 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.2E-92 T 06-07-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 3.8E-144 T 06-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 Gene3D G3DSA:3.10.290.10 322 423 2.3E-30 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 Gene3D G3DSA:3.40.50.620 3 237 7.7E-104 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS11785 a648ab84e3258b781cb468fe04e7babd 424 SUPERFAMILY SSF52374 4 328 9.85E-107 T 06-07-2017 AM402_RS12920 e4c9306cbde889a61ae9dccff254959a 375 Gene3D G3DSA:1.10.530.10 114 169 5.3E-56 T 06-07-2017 AM402_RS12920 e4c9306cbde889a61ae9dccff254959a 375 Gene3D G3DSA:1.10.530.10 251 367 5.3E-56 T 06-07-2017 AM402_RS12920 e4c9306cbde889a61ae9dccff254959a 375 Pfam PF13406 Transglycosylase SLT domain 69 362 6.1E-103 T 06-07-2017 IPR031304 Transglycosylase SLT domain 2 AM402_RS12920 e4c9306cbde889a61ae9dccff254959a 375 SUPERFAMILY SSF53955 63 364 4.08E-87 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS12920 e4c9306cbde889a61ae9dccff254959a 375 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 68 365 5.1E-106 T 06-07-2017 IPR011970 Lytic murein transglycosylase AM402_RS02915 9e1d10e9e8815a8a5bc477343c2e5fa3 289 SUPERFAMILY SSF161098 70 257 3.92E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02915 9e1d10e9e8815a8a5bc477343c2e5fa3 289 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 1 43 6.5E-8 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM402_RS02915 9e1d10e9e8815a8a5bc477343c2e5fa3 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 276 6.8E-25 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02915 9e1d10e9e8815a8a5bc477343c2e5fa3 289 Gene3D G3DSA:1.10.3720.10 69 273 1.0E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18840 9d74ae3364f0926fa9784d3b52c1a8a8 135 SUPERFAMILY SSF54637 5 128 3.25E-31 T 06-07-2017 IPR029069 HotDog domain AM402_RS18840 9d74ae3364f0926fa9784d3b52c1a8a8 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 118 2.6E-23 T 06-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM402_RS18840 9d74ae3364f0926fa9784d3b52c1a8a8 135 Gene3D G3DSA:3.10.129.10 4 128 3.8E-35 T 06-07-2017 IPR029069 HotDog domain AM402_RS18840 9d74ae3364f0926fa9784d3b52c1a8a8 135 Pfam PF13279 Thioesterase-like superfamily 12 118 3.0E-16 T 06-07-2017 AM402_RS18840 9d74ae3364f0926fa9784d3b52c1a8a8 135 PIRSF PIRSF003230 1 134 4.9E-23 T 06-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 Gene3D G3DSA:3.50.50.60 106 309 5.5E-47 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 SUPERFAMILY SSF55124 501 626 5.4E-29 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 SUPERFAMILY SSF51905 147 310 2.46E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 2.6E-48 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 1.1E-15 T 06-07-2017 IPR007419 BFD-like [2Fe-2S]-binding domain AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PIRSF PIRSF037149 1 834 0.0 T 06-07-2017 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 Gene3D G3DSA:3.30.413.10 632 767 2.1E-30 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.9E-13 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.9E-13 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.9E-13 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 4.9E-13 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 767 2.6E-15 T 06-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 799 0.0 T 06-07-2017 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 9.6E-6 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 9.6E-6 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 Gene3D G3DSA:3.50.50.60 2 105 4.8E-24 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 621 4.4E-10 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.4E-9 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.4E-9 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.4E-9 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.4E-9 T 06-07-2017 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 SUPERFAMILY SSF51905 3 189 1.14E-38 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS10925 85cfc4d9ed3686537b478b0bf3933bb0 848 SUPERFAMILY SSF56014 632 808 5.76E-47 T 06-07-2017 AM402_RS04290 a5fdc5875047866e7867e4ef0bcb6fba 472 PIRSF PIRSF016636 1 472 9.0E-128 T 06-07-2017 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB AM402_RS04290 a5fdc5875047866e7867e4ef0bcb6fba 472 PIRSF PIRSF500217 1 472 1.2E-128 T 06-07-2017 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 AM402_RS04290 a5fdc5875047866e7867e4ef0bcb6fba 472 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 146 356 3.0E-21 T 06-07-2017 IPR004299 Membrane bound O-acyl transferase, MBOAT AM402_RS19715 c45341873d50261b72a2fbbcf9e81918 178 Pfam PF02470 MlaD protein 39 118 6.1E-16 T 06-07-2017 IPR003399 Mce/MlaD AM402_RS19715 c45341873d50261b72a2fbbcf9e81918 178 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 155 2.3E-49 T 06-07-2017 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AM402_RS19850 8af972dfe066efe9593ed876e40f2d50 324 SUPERFAMILY SSF51735 115 288 5.47E-41 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19850 8af972dfe066efe9593ed876e40f2d50 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.2E-4 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM402_RS19850 8af972dfe066efe9593ed876e40f2d50 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 1.2E-137 T 06-07-2017 IPR014188 Acrylyl-CoA reductase AcuI AM402_RS19850 8af972dfe066efe9593ed876e40f2d50 324 SUPERFAMILY SSF50129 1 144 1.79E-42 T 06-07-2017 IPR011032 GroES-like AM402_RS19850 8af972dfe066efe9593ed876e40f2d50 324 Gene3D G3DSA:3.40.50.720 125 289 2.6E-76 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19850 8af972dfe066efe9593ed876e40f2d50 324 Pfam PF00107 Zinc-binding dehydrogenase 158 281 1.0E-18 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM402_RS19850 8af972dfe066efe9593ed876e40f2d50 324 SMART SM00829 8 322 2.5E-5 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM402_RS19850 8af972dfe066efe9593ed876e40f2d50 324 Gene3D G3DSA:3.90.180.10 1 86 1.5E-6 T 06-07-2017 IPR011032 GroES-like AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Gene3D G3DSA:1.10.486.10 589 734 3.5E-54 T 06-07-2017 AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 442 1.1E-59 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1190 0.0 T 06-07-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Gene3D G3DSA:3.40.50.300 124 154 1.1E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Gene3D G3DSA:3.40.50.300 357 455 1.1E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Gene3D G3DSA:3.40.50.300 18 84 1.1E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Pfam PF12705 PD-(D/E)XK nuclease superfamily 968 1182 7.7E-6 T 06-07-2017 AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1191 22.82 T 06-07-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 SUPERFAMILY SSF52540 524 825 2.82E-106 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 SUPERFAMILY SSF52540 122 206 2.82E-106 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 SUPERFAMILY SSF52540 19 82 2.82E-106 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 SUPERFAMILY SSF52540 331 476 2.82E-106 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Gene3D G3DSA:3.90.320.10 896 1194 7.4E-106 T 06-07-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Gene3D G3DSA:3.40.50.300 735 887 1.5E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Gene3D G3DSA:3.40.50.300 456 586 1.5E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Gene3D G3DSA:1.10.3170.10 159 355 9.7E-57 T 06-07-2017 AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 Pfam PF13361 UvrD-like helicase C-terminal domain 448 821 1.1E-20 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM402_RS06110 3cc45c5a147c57d3fb3c4a8e4e8301a2 1212 SUPERFAMILY SSF52980 905 1192 3.0E-92 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM402_RS01475 5d58747d0c22394d88dc8ef25ac89dec 113 Pfam PF14213 Domain of unknown function (DUF4325) 23 80 8.5E-10 T 06-07-2017 IPR025474 Domain of unknown function DUF4325 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 Gene3D G3DSA:3.40.720.10 54 478 6.8E-134 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 ProSitePatterns PS00123 Alkaline phosphatase active site. 129 137 - T 06-07-2017 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 PRINTS PR00113 Alkaline phosphatase signature 328 357 2.6E-47 T 06-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 PRINTS PR00113 Alkaline phosphatase signature 166 186 2.6E-47 T 06-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 PRINTS PR00113 Alkaline phosphatase signature 229 239 2.6E-47 T 06-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 PRINTS PR00113 Alkaline phosphatase signature 72 92 2.6E-47 T 06-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 PRINTS PR00113 Alkaline phosphatase signature 129 144 2.6E-47 T 06-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 Pfam PF00245 Alkaline phosphatase 72 437 1.6E-117 T 06-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 SUPERFAMILY SSF53649 49 478 1.35E-131 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS05160 0baca0a66fcfbf1e269fa7d8531f1f23 479 SMART SM00098 73 479 2.0E-180 T 06-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 516 1.4E-57 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 Pfam PF00672 HAMP domain 197 265 4.0E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 SMART SM00304 215 269 1.7E-6 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 SMART SM00283 270 517 4.8E-86 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 Gene3D G3DSA:1.10.287.950 285 489 4.8E-60 T 06-07-2017 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 SUPERFAMILY SSF58104 241 518 1.44E-68 T 06-07-2017 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 SUPERFAMILY SSF47170 29 166 3.92E-8 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS03565 2fb5ac3562e4345f958c2ae477a9871b 563 Pfam PF02203 Tar ligand binding domain homologue 1 164 1.8E-16 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Gene3D G3DSA:1.10.730.10 642 827 1.4E-66 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 SUPERFAMILY SSF52374 12 203 5.42E-137 T 06-07-2017 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 SUPERFAMILY SSF52374 620 652 5.42E-137 T 06-07-2017 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 SUPERFAMILY SSF52374 375 582 5.42E-137 T 06-07-2017 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Gene3D G3DSA:3.90.740.10 205 371 6.5E-49 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Gene3D G3DSA:1.10.287.380 889 948 1.7E-7 T 06-07-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 PRINTS PR00986 Valyl-tRNA synthetase signature 46 57 1.1E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 PRINTS PR00986 Valyl-tRNA synthetase signature 480 501 1.1E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 PRINTS PR00986 Valyl-tRNA synthetase signature 247 264 1.1E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 PRINTS PR00986 Valyl-tRNA synthetase signature 380 393 1.1E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 PRINTS PR00986 Valyl-tRNA synthetase signature 511 529 1.1E-35 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 895 952 2.9E-17 T 06-07-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 53 64 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 SUPERFAMILY SSF50677 202 376 2.35E-59 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 SUPERFAMILY SSF47323 653 910 1.33E-71 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 TIGRFAM TIGR00422 valS: valine--tRNA ligase 14 942 0.0 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Hamap MF_02004 Valine--tRNA ligase [valS]. 12 960 16.225 T 06-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Pfam PF08264 Anticodon-binding domain of tRNA 685 836 6.2E-46 T 06-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 SUPERFAMILY SSF46589 895 956 4.6E-16 T 06-07-2017 IPR010978 tRNA-binding arm GO:0000166 AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Gene3D G3DSA:3.40.50.620 15 204 5.6E-142 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Gene3D G3DSA:3.40.50.620 375 582 5.6E-142 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Gene3D G3DSA:3.40.50.620 620 641 5.6E-142 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS20520 2f7f659c0f7c3a0e57b940105f7a2131 962 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 25 642 3.9E-226 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 Gene3D G3DSA:1.20.1640.10 136 303 2.5E-27 T 06-07-2017 AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 Pfam PF07549 SecD/SecF GG Motif 40 66 4.9E-11 T 06-07-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.152 T 06-07-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 2.5E-89 T 06-07-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 Pfam PF02355 Protein export membrane protein 120 300 1.2E-71 T 06-07-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 127 288 2.7E-55 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM402_RS19040 ad11dd2e2aa6f37bd71c80d50853909f 322 SUPERFAMILY SSF82866 80 302 5.49E-42 T 06-07-2017 AM402_RS05885 437b4e32b24d0500d6c01ebbf4ec02eb 307 Gene3D G3DSA:2.40.320.10 2 205 2.4E-31 T 06-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 AM402_RS05885 437b4e32b24d0500d6c01ebbf4ec02eb 307 SUPERFAMILY SSF55154 2 208 1.21E-44 T 06-07-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AM402_RS05885 437b4e32b24d0500d6c01ebbf4ec02eb 307 Pfam PF01928 CYTH domain 4 197 3.2E-24 T 06-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 AM402_RS05885 437b4e32b24d0500d6c01ebbf4ec02eb 307 SMART SM01118 3 203 1.2E-30 T 06-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 AM402_RS06815 e6eeec07428292ef4ea904cd7d11d220 285 Pfam PF14559 Tetratricopeptide repeat 125 191 1.8E-21 T 06-07-2017 AM402_RS06815 e6eeec07428292ef4ea904cd7d11d220 285 Gene3D G3DSA:1.25.40.10 111 197 4.6E-32 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS06815 e6eeec07428292ef4ea904cd7d11d220 285 SUPERFAMILY SSF52833 4 114 1.34E-26 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS06815 e6eeec07428292ef4ea904cd7d11d220 285 Gene3D G3DSA:3.40.30.10 6 110 1.8E-24 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS06815 e6eeec07428292ef4ea904cd7d11d220 285 SUPERFAMILY SSF48452 120 247 2.0E-10 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS06815 e6eeec07428292ef4ea904cd7d11d220 285 Pfam PF00085 Thioredoxin 8 108 1.0E-16 T 06-07-2017 IPR013766 Thioredoxin domain GO:0045454 AM402_RS06815 e6eeec07428292ef4ea904cd7d11d220 285 Gene3D G3DSA:1.25.40.10 198 285 2.5E-29 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS06815 e6eeec07428292ef4ea904cd7d11d220 285 Pfam PF14561 Tetratricopeptide repeat 196 285 2.0E-27 T 06-07-2017 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 427 436 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 238 251 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 SUPERFAMILY SSF52540 213 451 4.48E-74 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 Gene3D G3DSA:1.10.8.60 387 439 5.8E-25 T 06-07-2017 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 Pfam PF00158 Sigma-54 interaction domain 214 380 2.0E-70 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 SUPERFAMILY SSF55781 17 192 1.79E-19 T 06-07-2017 IPR029016 GAF domain-like AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 SUPERFAMILY SSF46689 427 531 8.51E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 SMART SM00382 234 378 4.4E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 492 509 2.2E-5 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 512 532 2.2E-5 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 Pfam PF01590 GAF domain 36 178 4.6E-11 T 06-07-2017 IPR003018 GAF domain GO:0005515 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 Gene3D G3DSA:1.10.10.60 440 531 2.1E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 SMART SM00065 36 188 1.6E-17 T 06-07-2017 IPR003018 GAF domain GO:0005515 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 Gene3D G3DSA:3.40.50.300 211 386 5.0E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 Pfam PF02954 Bacterial regulatory protein, Fis family 488 529 1.8E-5 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS20125 16307498c9bd63f35fd2a5b2ae56afca 537 Gene3D G3DSA:3.30.450.40 11 191 9.0E-21 T 06-07-2017 IPR029016 GAF domain-like AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.1E-40 T 06-07-2017 IPR013029 Domain of unknown function DUF933 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 Gene3D G3DSA:1.10.150.300 131 200 4.6E-28 T 06-07-2017 IPR023192 TGS-like domain AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 SUPERFAMILY SSF52540 3 301 1.13E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 Gene3D G3DSA:3.40.50.300 201 266 1.7E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 Gene3D G3DSA:3.40.50.300 4 130 1.7E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 47.237 T 06-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 Gene3D G3DSA:3.10.20.30 267 363 2.7E-50 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 8.7E-175 T 06-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 PIRSF PIRSF006641 1 363 6.3E-159 T 06-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 2.3E-21 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS13215 cdf5c2b85f83a54ca28df4a27521ed42 363 SUPERFAMILY SSF81271 279 359 9.81E-37 T 06-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 PIRSF PIRSF006160 1 162 3.8E-65 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 1.1E-61 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 1.0E-80 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.381 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 Gene3D G3DSA:3.30.1360.80 1 170 4.4E-75 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 SUPERFAMILY SSF63411 4 162 3.11E-66 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.5E-49 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.5E-49 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.5E-49 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.5E-49 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS17100 0148fda47a93a738bc2538d535545850 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.5E-49 T 06-07-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1063 0.0 T 06-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 809 3.4E-293 T 06-07-2017 AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 Gene3D G3DSA:1.10.10.160 86 182 2.3E-33 T 06-07-2017 IPR013986 DExx box DNA helicase domain AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 SUPERFAMILY SSF52540 1 349 4.35E-124 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1125 20.574 T 06-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 PIRSF PIRSF000980 1 1120 0.0 T 06-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 Gene3D G3DSA:3.40.50.300 366 457 4.9E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 Gene3D G3DSA:3.40.50.300 659 755 4.9E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 SUPERFAMILY SSF52540 364 813 1.86E-98 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06100 a4d527cb5fadc0a5a98a6e9ae918c4f5 1125 SUPERFAMILY SSF52980 830 1121 8.58E-83 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM402_RS20185 e8897deed4e3e8e3e01577e90c22ca84 300 Gene3D G3DSA:3.40.190.10 95 177 1.7E-6 T 06-07-2017 AM402_RS20185 e8897deed4e3e8e3e01577e90c22ca84 300 Gene3D G3DSA:3.40.190.10 178 255 3.4E-7 T 06-07-2017 AM402_RS20185 e8897deed4e3e8e3e01577e90c22ca84 300 SUPERFAMILY SSF53850 92 289 3.98E-27 T 06-07-2017 AM402_RS20185 e8897deed4e3e8e3e01577e90c22ca84 300 Gene3D G3DSA:1.10.10.10 6 86 2.2E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20185 e8897deed4e3e8e3e01577e90c22ca84 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.9E-17 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS20185 e8897deed4e3e8e3e01577e90c22ca84 300 Pfam PF03466 LysR substrate binding domain 93 289 7.3E-25 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS20185 e8897deed4e3e8e3e01577e90c22ca84 300 SUPERFAMILY SSF46785 5 86 9.52E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS18110 70f98477ff83791ed262a827f9de556e 112 SUPERFAMILY SSF69118 3 107 9.42E-30 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM402_RS18110 70f98477ff83791ed262a827f9de556e 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 101 1.8E-21 T 06-07-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM402_RS18110 70f98477ff83791ed262a827f9de556e 112 Gene3D G3DSA:1.20.1290.10 1 111 6.3E-37 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM402_RS18110 70f98477ff83791ed262a827f9de556e 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 89 4.0E-19 T 06-07-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM402_RS01700 a7f89e653616ed967429307a712c7310 312 Gene3D G3DSA:3.90.25.10 172 292 8.5E-34 T 06-07-2017 AM402_RS01700 a7f89e653616ed967429307a712c7310 312 Gene3D G3DSA:3.40.50.720 2 171 3.2E-25 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01700 a7f89e653616ed967429307a712c7310 312 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 310 4.0E-134 T 06-07-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM402_RS01700 a7f89e653616ed967429307a712c7310 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 1.5E-46 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AM402_RS01700 a7f89e653616ed967429307a712c7310 312 SUPERFAMILY SSF51735 1 308 1.21E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01700 a7f89e653616ed967429307a712c7310 312 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 311 57.157 T 06-07-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM402_RS13845 f8bc6af195db24d779169d4f50515932 155 Pfam PF05119 Phage terminase, small subunit 46 143 7.6E-25 T 06-07-2017 IPR006448 Putative phage terminase, small subunit, P27 family AM402_RS13845 f8bc6af195db24d779169d4f50515932 155 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 37 151 1.1E-22 T 06-07-2017 IPR006448 Putative phage terminase, small subunit, P27 family AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Pfam PF04542 Sigma-70 region 2 384 453 1.7E-21 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 PRINTS PR00046 Major sigma-70 factor signature 556 568 2.8E-30 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 PRINTS PR00046 Major sigma-70 factor signature 432 440 2.8E-30 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 PRINTS PR00046 Major sigma-70 factor signature 592 603 2.8E-30 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 PRINTS PR00046 Major sigma-70 factor signature 577 592 2.8E-30 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 PRINTS PR00046 Major sigma-70 factor signature 408 421 2.8E-30 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 577 603 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.4E-12 T 06-07-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Gene3D G3DSA:1.10.601.10 112 453 4.4E-136 T 06-07-2017 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Pfam PF04545 Sigma-70, region 4 552 605 2.0E-17 T 06-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Gene3D G3DSA:1.10.10.10 457 508 4.9E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 408 421 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Pfam PF04539 Sigma-70 region 3 463 538 6.7E-29 T 06-07-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 SUPERFAMILY SSF88946 115 451 5.02E-100 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Gene3D G3DSA:1.10.10.10 548 617 1.6E-31 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 380 616 3.7E-120 T 06-07-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 617 46.592 T 06-07-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 380 605 6.2E-37 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 SUPERFAMILY SSF88659 514 616 8.29E-25 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 SUPERFAMILY SSF88659 457 530 5.23E-20 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Pfam PF03979 Sigma-70 factor, region 1.1 4 78 5.6E-30 T 06-07-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AM402_RS05820 f971498382a707fa9abb69db07f21c4d 618 Pfam PF04546 Sigma-70, non-essential region 139 353 6.7E-76 T 06-07-2017 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS06120 ed59106493990e14f933ba169ad17172 444 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 1.0E-193 T 06-07-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM402_RS06120 ed59106493990e14f933ba169ad17172 444 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 233.046 T 06-07-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM402_RS06120 ed59106493990e14f933ba169ad17172 444 Gene3D G3DSA:3.40.1160.10 23 290 3.3E-67 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS06120 ed59106493990e14f933ba169ad17172 444 Pfam PF00696 Amino acid kinase family 25 266 3.8E-30 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS06120 ed59106493990e14f933ba169ad17172 444 Gene3D G3DSA:3.40.630.30 294 438 1.1E-37 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS06120 ed59106493990e14f933ba169ad17172 444 Pfam PF00583 Acetyltransferase (GNAT) family 345 413 2.1E-4 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS06120 ed59106493990e14f933ba169ad17172 444 SUPERFAMILY SSF53633 3 290 1.54E-67 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS06120 ed59106493990e14f933ba169ad17172 444 SUPERFAMILY SSF55729 297 419 3.54E-16 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS06120 ed59106493990e14f933ba169ad17172 444 PIRSF PIRSF000423 1 441 2.8E-206 T 06-07-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 Gene3D G3DSA:3.40.1060.10 167 280 2.6E-40 T 06-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 Gene3D G3DSA:3.30.499.10 294 303 1.4E-64 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 Gene3D G3DSA:3.30.499.10 335 466 1.4E-64 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 SUPERFAMILY SSF53732 1 465 4.32E-171 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 61.856 T 06-07-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 5.9E-157 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 Gene3D G3DSA:3.30.499.10 2 158 5.1E-24 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 6.7E-265 T 06-07-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 286 300 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 209 222 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 119 132 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 195 208 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 133 148 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 399 412 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 343 354 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 82 95 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07365 daafb6b7b0b5d40c278f7f50e54b719d 469 PRINTS PR00415 Aconitase family signature 108 116 4.6E-51 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 Gene3D G3DSA:1.10.490.10 2 141 4.5E-53 T 06-07-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 SUPERFAMILY SSF46458 1 142 6.98E-38 T 06-07-2017 IPR009050 Globin-like AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 Gene3D G3DSA:3.40.50.80 258 393 7.1E-29 T 06-07-2017 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 1.7E-12 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 6.8E-8 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 6.8E-8 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 6.8E-8 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 6.8E-8 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 Pfam PF00970 Oxidoreductase FAD-binding domain 155 253 3.0E-10 T 06-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 SUPERFAMILY SSF63380 149 254 1.12E-26 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 SUPERFAMILY SSF52343 255 392 7.6E-32 T 06-07-2017 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 Pfam PF00042 Globin 7 102 2.0E-12 T 06-07-2017 IPR000971 Globin GO:0019825|GO:0020037 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.061 T 06-07-2017 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AM402_RS08525 2bc17308c1102f8f82a6c53609938f8f 396 Gene3D G3DSA:2.40.30.10 149 254 1.3E-31 T 06-07-2017 AM402_RS02755 ea07429d5653265060ee41c8365e26c0 289 SUPERFAMILY SSF53067 1 287 1.34E-51 T 06-07-2017 AM402_RS02755 ea07429d5653265060ee41c8365e26c0 289 Gene3D G3DSA:3.30.420.40 3 133 2.2E-30 T 06-07-2017 AM402_RS02755 ea07429d5653265060ee41c8365e26c0 289 Gene3D G3DSA:3.30.420.40 134 262 1.8E-40 T 06-07-2017 AM402_RS02755 ea07429d5653265060ee41c8365e26c0 289 ProSitePatterns PS01125 ROK family signature. 129 156 - T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM402_RS02755 ea07429d5653265060ee41c8365e26c0 289 Pfam PF00480 ROK family 4 288 4.0E-76 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM402_RS12750 b756d55e7d40533a96818311778b8134 252 SUPERFAMILY SSF51206 23 162 2.75E-32 T 06-07-2017 IPR018490 Cyclic nucleotide-binding-like AM402_RS12750 b756d55e7d40533a96818311778b8134 252 Gene3D G3DSA:2.60.120.10 18 169 2.3E-41 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS12750 b756d55e7d40533a96818311778b8134 252 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.3E-16 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain AM402_RS12750 b756d55e7d40533a96818311778b8134 252 SMART SM00100 30 151 5.7E-23 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain AM402_RS12750 b756d55e7d40533a96818311778b8134 252 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 06-07-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM402_RS12750 b756d55e7d40533a96818311778b8134 252 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.3E-12 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM402_RS12750 b756d55e7d40533a96818311778b8134 252 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.3E-12 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM402_RS12750 b756d55e7d40533a96818311778b8134 252 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 5.8E-17 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM402_RS12750 b756d55e7d40533a96818311778b8134 252 SMART SM00419 187 235 4.8E-14 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM402_RS12750 b756d55e7d40533a96818311778b8134 252 Gene3D G3DSA:1.10.10.10 170 235 5.6E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12750 b756d55e7d40533a96818311778b8134 252 SUPERFAMILY SSF46785 165 244 4.12E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 869 931 1.2E-8 T 06-07-2017 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 Gene3D G3DSA:1.50.10.100 210 592 3.3E-113 T 06-07-2017 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 SUPERFAMILY SSF49863 868 1013 1.67E-21 T 06-07-2017 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 Pfam PF09093 Lyase, catalytic 231 579 3.3E-77 T 06-07-2017 IPR015177 Lyase, catalytic AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 SUPERFAMILY SSF48230 254 595 1.28E-83 T 06-07-2017 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 Pfam PF09092 Lyase, N terminal 35 190 3.9E-42 T 06-07-2017 IPR015176 Lyase, N-terminal AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 Gene3D G3DSA:2.60.120.410 25 194 2.5E-55 T 06-07-2017 IPR015176 Lyase, N-terminal AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 Gene3D G3DSA:2.60.220.10 870 1013 1.8E-35 T 06-07-2017 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 Gene3D G3DSA:2.70.98.10 593 869 3.3E-72 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 614 857 2.3E-25 T 06-07-2017 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 PIRSF PIRSF034515 1 1013 0.0 T 06-07-2017 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 SUPERFAMILY SSF74650 591 868 1.57E-61 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM402_RS07165 d20ee677545248eb2a61e6e04f77e8f7 1013 SUPERFAMILY SSF49785 35 193 2.04E-45 T 06-07-2017 IPR008979 Galactose-binding domain-like AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 6 402 1.2E-199 T 06-07-2017 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 Gene3D G3DSA:3.40.640.10 59 301 4.9E-92 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 398 5.2E-153 T 06-07-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 Pfam PF00202 Aminotransferase class-III 23 398 3.8E-131 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 Gene3D G3DSA:3.90.1150.10 305 400 2.5E-33 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 Gene3D G3DSA:3.90.1150.10 10 58 2.5E-33 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 SUPERFAMILY SSF53383 14 400 4.76E-126 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS03510 0c0da49c352bccdbc5d95bc30ec5d504 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 399 45.607 T 06-07-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 Gene3D G3DSA:1.10.10.60 340 388 2.5E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 SMART SM00342 303 386 4.2E-30 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 Pfam PF12833 Helix-turn-helix domain 311 387 2.3E-20 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 340 382 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 Pfam PF13377 Periplasmic binding protein-like domain 114 279 1.1E-32 T 06-07-2017 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 Gene3D G3DSA:3.40.50.2300 97 279 3.9E-28 T 06-07-2017 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 355 370 1.2E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 370 386 1.2E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 SUPERFAMILY SSF53822 10 300 1.67E-40 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 SUPERFAMILY SSF46689 340 388 6.72E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12330 875c8c8bdffa245e56fea6702d6f754c 389 Gene3D G3DSA:1.10.10.60 285 336 7.7E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS16670 9813aecd5858618fddc5725f302c2f05 410 SUPERFAMILY SSF53067 92 398 2.16E-53 T 06-07-2017 AM402_RS16670 9813aecd5858618fddc5725f302c2f05 410 SUPERFAMILY SSF46785 17 82 3.49E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16670 9813aecd5858618fddc5725f302c2f05 410 Pfam PF00480 ROK family 92 396 4.0E-87 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM402_RS16670 9813aecd5858618fddc5725f302c2f05 410 Gene3D G3DSA:3.30.420.40 91 226 7.6E-31 T 06-07-2017 AM402_RS16670 9813aecd5858618fddc5725f302c2f05 410 Gene3D G3DSA:3.30.420.40 227 380 4.2E-46 T 06-07-2017 AM402_RS16670 9813aecd5858618fddc5725f302c2f05 410 Pfam PF01047 MarR family 28 66 1.7E-7 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS16670 9813aecd5858618fddc5725f302c2f05 410 Gene3D G3DSA:1.10.10.10 17 84 3.2E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS21830 677ac692a0e495ae4949e619e54fc94f 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 2.9E-13 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21830 677ac692a0e495ae4949e619e54fc94f 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.9E-13 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21830 677ac692a0e495ae4949e619e54fc94f 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 2.9E-13 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21830 677ac692a0e495ae4949e619e54fc94f 120 SMART SM00422 4 73 8.1E-18 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21830 677ac692a0e495ae4949e619e54fc94f 120 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 115 6.1E-57 T 06-07-2017 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 AM402_RS21830 677ac692a0e495ae4949e619e54fc94f 120 Gene3D G3DSA:1.10.1660.10 4 111 1.8E-18 T 06-07-2017 AM402_RS21830 677ac692a0e495ae4949e619e54fc94f 120 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.4E-12 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21830 677ac692a0e495ae4949e619e54fc94f 120 SUPERFAMILY SSF46955 4 109 4.4E-17 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS15240 9903578976876361c0c9bab912bdc514 730 SUPERFAMILY SSF69279 284 455 1.7E-29 T 06-07-2017 AM402_RS15240 9903578976876361c0c9bab912bdc514 730 Pfam PF05954 Phage late control gene D protein (GPD) 130 422 1.6E-66 T 06-07-2017 AM402_RS15240 9903578976876361c0c9bab912bdc514 730 SUPERFAMILY SSF69279 111 281 1.08E-39 T 06-07-2017 AM402_RS15240 9903578976876361c0c9bab912bdc514 730 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 122 593 8.4E-103 T 06-07-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM402_RS15240 9903578976876361c0c9bab912bdc514 730 Gene3D G3DSA:3.55.50.10 199 282 3.1E-23 T 06-07-2017 AM402_RS15240 9903578976876361c0c9bab912bdc514 730 SUPERFAMILY SSF69349 532 683 1.73E-34 T 06-07-2017 AM402_RS15240 9903578976876361c0c9bab912bdc514 730 SUPERFAMILY SSF69255 454 541 2.88E-29 T 06-07-2017 AM402_RS15240 9903578976876361c0c9bab912bdc514 730 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 110 611 5.0E-162 T 06-07-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM402_RS15240 9903578976876361c0c9bab912bdc514 730 Gene3D G3DSA:2.40.50.230 462 541 1.6E-34 T 06-07-2017 IPR006531 Gp5 N-terminal AM402_RS08970 4d8b197b6de28acbaabf521d2812cdd9 271 Pfam PF01416 tRNA pseudouridine synthase 15 110 4.4E-11 T 06-07-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS08970 4d8b197b6de28acbaabf521d2812cdd9 271 Pfam PF01416 tRNA pseudouridine synthase 149 251 3.0E-28 T 06-07-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS08970 4d8b197b6de28acbaabf521d2812cdd9 271 PIRSF PIRSF001430 8 262 1.6E-79 T 06-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS08970 4d8b197b6de28acbaabf521d2812cdd9 271 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 9 245 5.7E-80 T 06-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS08970 4d8b197b6de28acbaabf521d2812cdd9 271 Gene3D G3DSA:3.30.70.660 113 248 3.4E-46 T 06-07-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS08970 4d8b197b6de28acbaabf521d2812cdd9 271 Gene3D G3DSA:3.30.70.580 9 111 2.2E-40 T 06-07-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS08970 4d8b197b6de28acbaabf521d2812cdd9 271 SUPERFAMILY SSF55120 9 262 8.34E-94 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS08970 4d8b197b6de28acbaabf521d2812cdd9 271 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 8 250 35.799 T 06-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 SMART SM00382 26 223 4.1E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 SMART SM00382 337 506 1.9E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 Pfam PF12848 ABC transporter 217 297 1.7E-29 T 06-07-2017 IPR032781 ABC-transporter extension domain AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 SUPERFAMILY SSF52540 292 512 1.51E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 Gene3D G3DSA:3.40.50.300 310 537 1.5E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 Gene3D G3DSA:3.40.50.300 1 266 7.6E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 SUPERFAMILY SSF52540 119 244 9.96E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 SUPERFAMILY SSF52540 2 92 9.96E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 Pfam PF00005 ABC transporter 17 178 1.7E-23 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS03570 18b289ce2bdddae227f68635d38c8cb4 643 Pfam PF00005 ABC transporter 328 459 4.1E-25 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS19320 139e5a3886ef268baffb69e30d526610 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 3.4E-99 T 06-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 AM402_RS19320 139e5a3886ef268baffb69e30d526610 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 37.186 T 06-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 AM402_RS19320 139e5a3886ef268baffb69e30d526610 317 Pfam PF02401 LytB protein 3 283 4.4E-93 T 06-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 AM402_RS19320 139e5a3886ef268baffb69e30d526610 317 Gene3D G3DSA:3.40.50.2300 196 244 2.9E-4 T 06-07-2017 AM402_RS20690 0d9c7f99479aedabb68b313a60ce19e1 201 SUPERFAMILY SSF109604 7 167 1.02E-26 T 06-07-2017 AM402_RS20690 0d9c7f99479aedabb68b313a60ce19e1 201 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 81 184 9.0E-54 T 06-07-2017 AM402_RS20690 0d9c7f99479aedabb68b313a60ce19e1 201 Pfam PF13023 HD domain 16 118 8.4E-13 T 06-07-2017 IPR006674 HD domain AM402_RS20690 0d9c7f99479aedabb68b313a60ce19e1 201 Gene3D G3DSA:1.10.3210.10 3 153 1.5E-27 T 06-07-2017 IPR006674 HD domain AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 Gene3D G3DSA:2.30.40.10 67 136 3.6E-14 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 06-07-2017 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 1.4E-34 T 06-07-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 1.4E-34 T 06-07-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 1.4E-34 T 06-07-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 1.4E-34 T 06-07-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 Gene3D G3DSA:3.20.20.140 137 429 7.9E-204 T 06-07-2017 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 Gene3D G3DSA:3.20.20.140 488 565 7.9E-204 T 06-07-2017 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 SUPERFAMILY SSF51556 130 431 4.15E-193 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 SUPERFAMILY SSF51556 480 567 4.15E-193 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 06-07-2017 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.886 T 06-07-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 SUPERFAMILY SSF51338 422 477 4.01E-6 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 4.3E-290 T 06-07-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 1.1E-56 T 06-07-2017 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 Pfam PF01979 Amidohydrolase family 125 453 4.7E-82 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AM402_RS19585 61c0d3e49560ba5078a07fd51c0db1cb 567 SUPERFAMILY SSF51338 1 177 2.75E-63 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS00465 826c7c2053ab3b03b723ce7bcf0736b8 1111 SUPERFAMILY SSF82689 992 1086 6.54E-16 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM402_RS00465 826c7c2053ab3b03b723ce7bcf0736b8 1111 SUPERFAMILY SSF50182 925 990 3.92E-16 T 06-07-2017 IPR010920 LSM domain AM402_RS00465 826c7c2053ab3b03b723ce7bcf0736b8 1111 Pfam PF12795 Mechanosensitive ion channel porin domain 33 260 2.2E-55 T 06-07-2017 IPR024393 Mechanosensitive ion channel MscS, porin domain AM402_RS00465 826c7c2053ab3b03b723ce7bcf0736b8 1111 Gene3D G3DSA:3.30.70.100 995 1079 3.8E-10 T 06-07-2017 AM402_RS00465 826c7c2053ab3b03b723ce7bcf0736b8 1111 Pfam PF00924 Mechanosensitive ion channel 882 1080 2.2E-50 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM402_RS00465 826c7c2053ab3b03b723ce7bcf0736b8 1111 Gene3D G3DSA:2.30.30.60 940 989 2.0E-15 T 06-07-2017 AM402_RS00465 826c7c2053ab3b03b723ce7bcf0736b8 1111 SUPERFAMILY SSF82861 840 923 4.18E-8 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM402_RS00465 826c7c2053ab3b03b723ce7bcf0736b8 1111 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 482 821 1.6E-110 T 06-07-2017 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AM402_RS14220 f6a6d528fe1d506b4a8e6a901f8278e8 275 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 7 273 1.9E-90 T 06-07-2017 IPR019276 Protein of unkown function DUF2303 AM402_RS13950 f6a6d528fe1d506b4a8e6a901f8278e8 275 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 7 273 1.9E-90 T 06-07-2017 IPR019276 Protein of unkown function DUF2303 AM402_RS17585 7b3d4a15b76160258f9429f18489361c 499 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 5 486 2.8E-179 T 06-07-2017 IPR021207 Integrating conjugative element protein, PFL4705 AM402_RS17585 7b3d4a15b76160258f9429f18489361c 499 Pfam PF03743 Bacterial conjugation TrbI-like protein 367 472 3.6E-6 T 06-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 SUPERFAMILY SSF56645 119 355 5.76E-45 T 06-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 SUPERFAMILY SSF47203 360 507 3.38E-21 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 5.9E-115 T 06-07-2017 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 Gene3D G3DSA:2.40.110.10 237 349 1.3E-15 T 06-07-2017 AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.5E-11 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 2.0E-8 T 06-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 Gene3D G3DSA:1.10.540.10 95 234 1.8E-33 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 3.5E-16 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AM402_RS17275 dd8c3e2044089e0276cf25e279a86941 815 Gene3D G3DSA:1.20.140.10 350 507 1.6E-22 T 06-07-2017 AM402_RS11980 c2539734e88ea48d4e13cef8867b3f74 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.532 T 06-07-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM402_RS11980 c2539734e88ea48d4e13cef8867b3f74 396 Gene3D G3DSA:3.40.50.1100 96 175 1.2E-21 T 06-07-2017 AM402_RS11980 c2539734e88ea48d4e13cef8867b3f74 396 SUPERFAMILY SSF53686 5 389 2.1E-142 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS11980 c2539734e88ea48d4e13cef8867b3f74 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 4.6E-190 T 06-07-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM402_RS11980 c2539734e88ea48d4e13cef8867b3f74 396 Gene3D G3DSA:3.40.50.1100 176 391 4.6E-90 T 06-07-2017 AM402_RS11980 c2539734e88ea48d4e13cef8867b3f74 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 367 8.7E-51 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS11980 c2539734e88ea48d4e13cef8867b3f74 396 PIRSF PIRSF001413 1 396 4.5E-168 T 06-07-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM402_RS11980 c2539734e88ea48d4e13cef8867b3f74 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 06-07-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM402_RS15935 3647013d53d0e2e6b9c25a29e3bc1f70 311 SUPERFAMILY SSF142338 11 294 3.92E-82 T 06-07-2017 AM402_RS15935 3647013d53d0e2e6b9c25a29e3bc1f70 311 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.781 T 06-07-2017 IPR010119 Gluconeogenesis factor AM402_RS15935 3647013d53d0e2e6b9c25a29e3bc1f70 311 Pfam PF01933 Uncharacterised protein family UPF0052 12 295 1.8E-76 T 06-07-2017 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AM402_RS15935 3647013d53d0e2e6b9c25a29e3bc1f70 311 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 269 1.3E-97 T 06-07-2017 IPR010119 Gluconeogenesis factor AM402_RS15935 3647013d53d0e2e6b9c25a29e3bc1f70 311 Gene3D G3DSA:3.40.50.10680 82 302 2.6E-50 T 06-07-2017 AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 Pfam PF11870 Domain of unknown function (DUF3390) 387 468 1.9E-10 T 06-07-2017 IPR024569 4Fe-4S binding protein, C-terminal AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 Pfam PF13183 4Fe-4S dicluster domain 309 376 6.0E-12 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 SUPERFAMILY SSF46548 282 391 2.96E-19 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 Gene3D G3DSA:3.40.50.10420 189 292 3.8E-54 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 Gene3D G3DSA:3.40.50.10420 64 128 3.8E-54 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 Gene3D G3DSA:1.10.1060.10 293 399 1.3E-13 T 06-07-2017 AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 19 453 5.5E-210 T 06-07-2017 IPR004452 4Fe-4S binding protein GO:0019516 AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 72 294 7.1E-57 T 06-07-2017 IPR003741 LUD domain AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 SUPERFAMILY SSF100950 135 295 1.38E-41 T 06-07-2017 AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 SUPERFAMILY SSF100950 64 89 1.38E-41 T 06-07-2017 AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 362 373 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS08170 30dfc522af0d0406fba8a13148f8fc4f 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 Gene3D G3DSA:3.40.50.300 474 701 2.5E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 Gene3D G3DSA:1.20.1560.10 143 457 5.3E-50 T 06-07-2017 AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 SMART SM00382 500 688 9.3E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 Gene3D G3DSA:3.90.70.10 5 125 2.0E-15 T 06-07-2017 AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 SUPERFAMILY SSF90123 140 457 9.03E-51 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 Pfam PF00005 ABC transporter 491 641 9.0E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 SUPERFAMILY SSF52540 463 701 1.36E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 Pfam PF00664 ABC transporter transmembrane region 158 418 1.4E-20 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS17930 7d4b26455c4602ed969b3cae9371867c 720 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 5 705 6.6E-259 T 06-07-2017 IPR017750 ATPase, type I secretion system AM402_RS13555 d8c5c824840ad968b9a3707a049392f2 182 Gene3D G3DSA:2.40.320.10 9 178 2.7E-33 T 06-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 AM402_RS13555 d8c5c824840ad968b9a3707a049392f2 182 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 9 176 1.1E-16 T 06-07-2017 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 AM402_RS13555 d8c5c824840ad968b9a3707a049392f2 182 Pfam PF01928 CYTH domain 10 171 3.9E-12 T 06-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 AM402_RS13555 d8c5c824840ad968b9a3707a049392f2 182 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 9 137 1.0E-7 T 06-07-2017 AM402_RS13555 d8c5c824840ad968b9a3707a049392f2 182 SUPERFAMILY SSF55154 9 177 1.39E-30 T 06-07-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AM402_RS21780 970e5446d964ae0d303004614c009099 259 PIRSF PIRSF003073 1 256 5.9E-84 T 06-07-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM402_RS21780 970e5446d964ae0d303004614c009099 259 Pfam PF01695 IstB-like ATP binding protein 56 233 8.9E-63 T 06-07-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 AM402_RS21780 970e5446d964ae0d303004614c009099 259 SMART SM00382 100 234 1.1E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS21780 970e5446d964ae0d303004614c009099 259 Gene3D G3DSA:3.40.50.300 72 233 4.4E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21780 970e5446d964ae0d303004614c009099 259 SUPERFAMILY SSF52540 71 243 6.52E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21060 970e5446d964ae0d303004614c009099 259 PIRSF PIRSF003073 1 256 5.9E-84 T 06-07-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM402_RS21060 970e5446d964ae0d303004614c009099 259 Pfam PF01695 IstB-like ATP binding protein 56 233 8.9E-63 T 06-07-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 AM402_RS21060 970e5446d964ae0d303004614c009099 259 SMART SM00382 100 234 1.1E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS21060 970e5446d964ae0d303004614c009099 259 Gene3D G3DSA:3.40.50.300 72 233 4.4E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21060 970e5446d964ae0d303004614c009099 259 SUPERFAMILY SSF52540 71 243 6.52E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00625 c57647a63ecbf58df0c734cd7178d25e 245 SUPERFAMILY SSF53822 122 221 4.63E-5 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS00625 c57647a63ecbf58df0c734cd7178d25e 245 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 64 230 7.8E-54 T 06-07-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM402_RS00625 c57647a63ecbf58df0c734cd7178d25e 245 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 236 7.3E-73 T 06-07-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM402_RS00625 c57647a63ecbf58df0c734cd7178d25e 245 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 245 57.423 T 06-07-2017 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM402_RS00625 c57647a63ecbf58df0c734cd7178d25e 245 Gene3D G3DSA:3.40.50.2300 122 196 2.7E-4 T 06-07-2017 AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 Pfam PF00072 Response regulator receiver domain 18 119 2.6E-7 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 198 2.2E-20 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.2E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.2E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.2E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 SMART SM00421 143 200 9.2E-19 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 SUPERFAMILY SSF52172 8 169 2.85E-15 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 Gene3D G3DSA:3.40.50.2300 18 151 2.2E-13 T 06-07-2017 AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 Gene3D G3DSA:1.10.10.10 152 198 2.6E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06705 7a2e632e51dea06c3a61f6a1fef2c42c 211 SUPERFAMILY SSF46894 129 198 1.63E-17 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS05595 1d36475b7dc3bc3112dcbaa916e1a21c 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.833 T 06-07-2017 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AM402_RS05595 1d36475b7dc3bc3112dcbaa916e1a21c 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 12 231 1.1E-78 T 06-07-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 AM402_RS05595 1d36475b7dc3bc3112dcbaa916e1a21c 259 SMART SM01133 10 246 5.1E-80 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 AM402_RS05595 1d36475b7dc3bc3112dcbaa916e1a21c 259 Gene3D G3DSA:3.20.20.70 5 256 4.7E-91 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS05595 1d36475b7dc3bc3112dcbaa916e1a21c 259 Pfam PF01791 DeoC/LacD family aldolase 12 240 3.8E-45 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 AM402_RS05595 1d36475b7dc3bc3112dcbaa916e1a21c 259 SUPERFAMILY SSF51569 10 246 1.67E-80 T 06-07-2017 AM402_RS05595 1d36475b7dc3bc3112dcbaa916e1a21c 259 PIRSF PIRSF001357 5 255 1.8E-77 T 06-07-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 AM402_RS03015 a1c7dbb6361be37e618c4199d7c0e232 166 Gene3D G3DSA:3.40.50.2020 3 165 9.6E-26 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS03015 a1c7dbb6361be37e618c4199d7c0e232 166 SUPERFAMILY SSF53271 3 164 2.49E-30 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 SUPERFAMILY SSF52335 7 196 1.06E-72 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 SUPERFAMILY SSF53927 221 529 1.3E-128 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 Gene3D G3DSA:3.40.140.20 377 519 7.4E-60 T 06-07-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 Pfam PF02142 MGS-like domain 19 132 1.9E-29 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.444 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 SMART SM00851 19 132 7.2E-63 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 3.7E-263 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 SMART SM00798 137 461 6.7E-216 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 Gene3D G3DSA:3.40.50.1380 4 190 3.5E-87 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 Gene3D G3DSA:3.40.140.20 253 373 1.2E-48 T 06-07-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 PIRSF PIRSF000414 1 529 3.9E-230 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS03765 ffc95dad7fc6214ee43999d21a2d85f1 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 1.6E-121 T 06-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS11175 b5f3f68f3166e7aaabfce97658dacc50 334 SUPERFAMILY SSF81345 3 327 4.84E-86 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS11175 b5f3f68f3166e7aaabfce97658dacc50 334 Gene3D G3DSA:1.10.3470.10 3 328 4.6E-106 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS11175 b5f3f68f3166e7aaabfce97658dacc50 334 Pfam PF01032 FecCD transport family 18 327 2.5E-95 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM402_RS02700 baf7b80a3b304b9794ace806cf11e87b 172 SUPERFAMILY SSF141452 3 168 9.94E-41 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS02700 baf7b80a3b304b9794ace806cf11e87b 172 Gene3D G3DSA:2.30.110.20 1 166 1.6E-34 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS02700 baf7b80a3b304b9794ace806cf11e87b 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 3.9E-34 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS02700 baf7b80a3b304b9794ace806cf11e87b 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 2.5E-65 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS08465 ed6fdd94805ffd670a90b77175444b03 828 SUPERFAMILY SSF141729 34 149 2.22E-25 T 06-07-2017 AM402_RS08465 ed6fdd94805ffd670a90b77175444b03 828 Pfam PF00577 Outer membrane usher protein 192 742 5.2E-193 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS08465 ed6fdd94805ffd670a90b77175444b03 828 Pfam PF13954 PapC N-terminal domain 35 174 9.2E-33 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS08465 ed6fdd94805ffd670a90b77175444b03 828 Pfam PF13953 PapC C-terminal domain 753 810 6.2E-13 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS08465 ed6fdd94805ffd670a90b77175444b03 828 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 304 314 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site AM402_RS08470 b0c7ecac7c992146a3bd172f1cfb71ab 105 Pfam PF00419 Fimbrial protein 3 105 2.7E-12 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08470 b0c7ecac7c992146a3bd172f1cfb71ab 105 SUPERFAMILY SSF49401 3 105 2.04E-20 T 06-07-2017 IPR008966 Adhesion domain AM402_RS08470 b0c7ecac7c992146a3bd172f1cfb71ab 105 Gene3D G3DSA:2.60.40.1090 3 105 1.4E-21 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 Gene3D G3DSA:2.140.10.10 157 542 8.9E-149 T 06-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 Gene3D G3DSA:2.140.10.10 577 797 8.9E-149 T 06-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 SMART SM00564 719 752 0.024 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 SMART SM00564 215 246 0.012 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 SMART SM00564 342 383 0.94 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 SMART SM00564 412 461 430.0 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 SUPERFAMILY SSF50998 158 525 2.09E-145 T 06-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 SUPERFAMILY SSF50998 566 796 2.09E-145 T 06-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 11 796 0.0 T 06-07-2017 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 407 428 - T 06-07-2017 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 Pfam PF01011 PQQ enzyme repeat 441 471 3.6E-4 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 Pfam PF01011 PQQ enzyme repeat 363 392 2.0E-5 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AM402_RS09050 00119bc15dcf7f671c8052129354bdc4 799 Pfam PF01011 PQQ enzyme repeat 725 762 2.4E-7 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AM402_RS17040 869311b9827c3cb4ad01fd5333f48740 111 Gene3D G3DSA:3.30.160.100 3 91 6.1E-30 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM402_RS17040 869311b9827c3cb4ad01fd5333f48740 111 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 2.0E-21 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM402_RS17040 869311b9827c3cb4ad01fd5333f48740 111 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.9E-32 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM402_RS17040 869311b9827c3cb4ad01fd5333f48740 111 SUPERFAMILY SSF69754 3 103 6.15E-31 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM402_RS03450 b3554b7b2a948007ad2bdbb1da4041d5 165 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 137 156 - T 06-07-2017 IPR019897 RidA, conserved site AM402_RS03450 b3554b7b2a948007ad2bdbb1da4041d5 165 Gene3D G3DSA:3.30.1330.40 33 163 7.2E-28 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS03450 b3554b7b2a948007ad2bdbb1da4041d5 165 Pfam PF01042 Endoribonuclease L-PSP 38 161 3.4E-21 T 06-07-2017 IPR006175 YjgF/YER057c/UK114 family AM402_RS03450 b3554b7b2a948007ad2bdbb1da4041d5 165 SUPERFAMILY SSF55298 33 163 3.46E-23 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SUPERFAMILY SSF50249 102 185 3.71E-14 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SUPERFAMILY SSF50249 189 277 3.95E-27 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 6.5E-238 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Gene3D G3DSA:2.40.50.140 355 439 1.5E-24 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.1E-98 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SUPERFAMILY SSF50249 1 112 7.8E-19 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SUPERFAMILY SSF50249 363 449 1.57E-20 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Gene3D G3DSA:2.40.50.140 192 274 6.7E-31 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Gene3D G3DSA:2.40.50.140 21 101 6.9E-11 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Gene3D G3DSA:2.40.50.140 102 172 9.0E-15 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Gene3D G3DSA:2.40.50.140 442 521 1.8E-20 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SMART SM00316 190 260 2.8E-28 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SMART SM00316 275 347 2.2E-27 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SMART SM00316 19 87 8.6E-5 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SMART SM00316 362 434 1.8E-20 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SMART SM00316 103 171 2.1E-8 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SMART SM00316 449 520 2.8E-20 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Pfam PF00575 S1 RNA binding domain 103 171 2.0E-9 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Pfam PF00575 S1 RNA binding domain 19 86 6.4E-7 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Pfam PF00575 S1 RNA binding domain 448 520 2.3E-15 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Pfam PF00575 S1 RNA binding domain 361 434 3.2E-21 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 Gene3D G3DSA:2.40.50.140 275 354 4.2E-30 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SUPERFAMILY SSF50249 255 371 3.5E-31 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 PIRSF PIRSF002111 1 534 8.0E-220 T 06-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM402_RS15420 22fd69e4ae222fe08cdcd37a7d217604 557 SUPERFAMILY SSF50249 429 536 2.01E-22 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS12810 afd1dec70b6624058f7bb5e34bd336e0 206 Gene3D G3DSA:3.40.50.360 1 200 4.7E-63 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS12810 afd1dec70b6624058f7bb5e34bd336e0 206 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 29.785 T 06-07-2017 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM402_RS12810 afd1dec70b6624058f7bb5e34bd336e0 206 Pfam PF02525 Flavodoxin-like fold 3 195 4.5E-43 T 06-07-2017 IPR003680 Flavodoxin-like fold AM402_RS12810 afd1dec70b6624058f7bb5e34bd336e0 206 SUPERFAMILY SSF52218 1 198 5.0E-50 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 SUPERFAMILY SSF49584 153 240 2.49E-21 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 PRINTS PR00969 Pili chaperone signature 21 30 8.1E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 PRINTS PR00969 Pili chaperone signature 70 91 8.1E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 PRINTS PR00969 Pili chaperone signature 98 115 8.1E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 PRINTS PR00969 Pili chaperone signature 131 146 8.1E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 PRINTS PR00969 Pili chaperone signature 167 182 8.1E-36 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 149 4.7E-44 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 Gene3D G3DSA:2.60.40.360 20 149 4.5E-48 T 06-07-2017 IPR008962 PapD-like AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 SUPERFAMILY SSF49354 15 149 7.06E-45 T 06-07-2017 IPR008962 PapD-like AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 Gene3D G3DSA:2.60.40.1070 152 238 6.0E-24 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS16320 c3b6ab00033c8ea5c181a81539c11572 241 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 174 234 1.1E-19 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS06270 1faa9d02d1d38c520f2029a81ba24fa8 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 13 239 1.1E-97 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM402_RS06270 1faa9d02d1d38c520f2029a81ba24fa8 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 06-07-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AM402_RS06270 1faa9d02d1d38c520f2029a81ba24fa8 252 SUPERFAMILY SSF64005 11 235 2.22E-87 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM402_RS06270 1faa9d02d1d38c520f2029a81ba24fa8 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.254 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM402_RS06270 1faa9d02d1d38c520f2029a81ba24fa8 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 2.6E-79 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM402_RS06270 1faa9d02d1d38c520f2029a81ba24fa8 252 Gene3D G3DSA:3.40.1180.10 10 245 5.1E-96 T 06-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM402_RS00060 70b1b1797fcdec0d532a53573313cdd9 238 SUPERFAMILY SSF52172 1 117 1.99E-31 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS00060 70b1b1797fcdec0d532a53573313cdd9 238 Gene3D G3DSA:2.40.50.40 133 199 5.5E-9 T 06-07-2017 AM402_RS00060 70b1b1797fcdec0d532a53573313cdd9 238 Gene3D G3DSA:3.40.50.2300 1 120 1.8E-32 T 06-07-2017 AM402_RS00060 70b1b1797fcdec0d532a53573313cdd9 238 Gene3D G3DSA:2.20.25.10 212 237 2.7E-6 T 06-07-2017 AM402_RS00060 70b1b1797fcdec0d532a53573313cdd9 238 SMART SM00448 1 111 1.1E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS00060 70b1b1797fcdec0d532a53573313cdd9 238 Pfam PF00072 Response regulator receiver domain 3 111 5.0E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS00060 70b1b1797fcdec0d532a53573313cdd9 238 Pfam PF04397 LytTr DNA-binding domain 142 235 6.9E-22 T 06-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 AM402_RS00060 70b1b1797fcdec0d532a53573313cdd9 238 SMART SM00850 141 236 1.3E-24 T 06-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 AM402_RS19740 7643a8ac8e9c8c95bbe8309ef9906bf9 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 1.7E-70 T 06-07-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM402_RS19740 7643a8ac8e9c8c95bbe8309ef9906bf9 185 PIRSF PIRSF006118 10 185 9.6E-75 T 06-07-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM402_RS19740 7643a8ac8e9c8c95bbe8309ef9906bf9 185 Gene3D G3DSA:3.40.50.1000 11 177 3.7E-50 T 06-07-2017 IPR023214 HAD-like domain AM402_RS19740 7643a8ac8e9c8c95bbe8309ef9906bf9 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 25 139 5.2E-14 T 06-07-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM402_RS19740 7643a8ac8e9c8c95bbe8309ef9906bf9 185 SUPERFAMILY SSF56784 20 177 9.59E-43 T 06-07-2017 IPR023214 HAD-like domain AM402_RS19740 7643a8ac8e9c8c95bbe8309ef9906bf9 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 154 7.0E-12 T 06-07-2017 IPR023214 HAD-like domain AM402_RS04360 67e1ab5d0eb4783cfef63966b9b29610 504 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 499 2.8E-161 T 06-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM402_RS04360 67e1ab5d0eb4783cfef63966b9b29610 504 Hamap MF_01049 L-carnitine/gamma-butyrobetaine antiporter [caiT]. 1 504 57.474 T 06-07-2017 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT GO:0016020|GO:0044667|GO:1900749|GO:1900751 AM402_RS04360 67e1ab5d0eb4783cfef63966b9b29610 504 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 06-07-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM402_RS04360 67e1ab5d0eb4783cfef63966b9b29610 504 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 499 3.3E-129 T 06-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 SUPERFAMILY SSF75615 114 208 4.71E-26 T 06-07-2017 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Gene3D G3DSA:3.30.160.110 113 148 1.0E-17 T 06-07-2017 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 9.6E-88 T 06-07-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Gene3D G3DSA:3.30.950.10 331 462 1.1E-44 T 06-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 SUPERFAMILY SSF51735 1 113 5.81E-25 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 427 2.4E-47 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Gene3D G3DSA:3.40.1010.10 214 330 1.2E-44 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Gene3D G3DSA:3.40.50.720 1 112 3.3E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.59 T 06-07-2017 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 SUPERFAMILY SSF53790 210 461 1.1E-77 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 2.1E-77 T 06-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Pfam PF13241 Putative NAD(P)-binding 6 115 1.4E-28 T 06-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 2.0E-20 T 06-07-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Gene3D G3DSA:1.10.8.210 150 210 2.2E-22 T 06-07-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 3.0E-7 T 06-07-2017 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06460 33f41b99a1886b6cb38d27b09de10b7c 473 PIRSF PIRSF036426 1 465 1.2E-196 T 06-07-2017 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 SUPERFAMILY SSF158791 59 170 6.54E-24 T 06-07-2017 AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 SUPERFAMILY SSF161093 316 486 4.18E-47 T 06-07-2017 AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 Pfam PF01769 Divalent cation transporter 358 480 4.8E-23 T 06-07-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 Gene3D G3DSA:1.10.357.20 315 486 8.2E-51 T 06-07-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 Gene3D G3DSA:3.10.580.10 166 296 3.2E-14 T 06-07-2017 AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 SUPERFAMILY SSF54631 173 313 1.3E-24 T 06-07-2017 AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 Gene3D G3DSA:1.25.60.10 51 165 1.0E-19 T 06-07-2017 AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 Pfam PF03448 MgtE intracellular N domain 71 172 1.9E-21 T 06-07-2017 IPR006668 Magnesium transporter, MgtE intracellular domain AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 Pfam PF00571 CBS domain 238 291 5.2E-5 T 06-07-2017 IPR000644 CBS domain AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 SMART SM00924 71 174 2.1E-28 T 06-07-2017 IPR006668 Magnesium transporter, MgtE intracellular domain AM402_RS10105 ba200d1a157c628002ae2f51a1178dd0 487 TIGRFAM TIGR00400 mgtE: magnesium transporter 59 487 2.2E-80 T 06-07-2017 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AM402_RS03895 b337bbca1ff42c840f8aba28b5c27509 174 Pfam PF00436 Single-strand binding protein family 6 112 6.6E-44 T 06-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM402_RS03895 b337bbca1ff42c840f8aba28b5c27509 174 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.788 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS03895 b337bbca1ff42c840f8aba28b5c27509 174 SUPERFAMILY SSF50249 4 174 1.17E-64 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS03895 b337bbca1ff42c840f8aba28b5c27509 174 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 174 1.5E-62 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS03895 b337bbca1ff42c840f8aba28b5c27509 174 Gene3D G3DSA:2.40.50.140 4 174 2.9E-60 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS08715 ecee309fdbbc115af5d23f6f05737910 169 Gene3D G3DSA:2.70.70.10 13 167 5.7E-59 T 06-07-2017 AM402_RS08715 ecee309fdbbc115af5d23f6f05737910 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM402_RS08715 ecee309fdbbc115af5d23f6f05737910 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.2E-48 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM402_RS08715 ecee309fdbbc115af5d23f6f05737910 169 SUPERFAMILY SSF51261 10 167 1.4E-55 T 06-07-2017 IPR011055 Duplicated hybrid motif AM402_RS08715 ecee309fdbbc115af5d23f6f05737910 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 9.7E-50 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM402_RS10110 0bd042c7c324d4f9204ecd1fc789e260 511 Gene3D G3DSA:3.30.420.150 136 314 6.4E-50 T 06-07-2017 AM402_RS10110 0bd042c7c324d4f9204ecd1fc789e260 511 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 15 309 8.0E-96 T 06-07-2017 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AM402_RS10110 0bd042c7c324d4f9204ecd1fc789e260 511 Gene3D G3DSA:3.30.420.40 12 135 1.7E-41 T 06-07-2017 AM402_RS10110 0bd042c7c324d4f9204ecd1fc789e260 511 SUPERFAMILY SSF53067 140 313 9.87E-46 T 06-07-2017 AM402_RS10110 0bd042c7c324d4f9204ecd1fc789e260 511 PIRSF PIRSF001267 6 509 1.2E-197 T 06-07-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM402_RS10110 0bd042c7c324d4f9204ecd1fc789e260 511 Pfam PF02541 Ppx/GppA phosphatase family 29 311 7.8E-91 T 06-07-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM402_RS10110 0bd042c7c324d4f9204ecd1fc789e260 511 SUPERFAMILY SSF53067 16 135 4.66E-35 T 06-07-2017 AM402_RS10110 0bd042c7c324d4f9204ecd1fc789e260 511 SUPERFAMILY SSF109604 316 509 5.76E-53 T 06-07-2017 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 Pfam PF13411 MerR HTH family regulatory protein 2 69 9.3E-23 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 SUPERFAMILY SSF46955 2 121 4.03E-35 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 1.0E-63 T 06-07-2017 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 Gene3D G3DSA:1.10.1660.10 1 56 8.5E-29 T 06-07-2017 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 Gene3D G3DSA:1.10.1660.10 57 134 5.8E-29 T 06-07-2017 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.1E-14 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.1E-14 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.1E-14 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 SMART SM00422 2 71 5.0E-31 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS00870 06e46e75ac32a9ecc339427085f7031b 137 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS08570 3813bf02b56e63ebc0d5bf8e9c323bac 128 Gene3D G3DSA:3.90.1010.10 2 126 3.4E-57 T 06-07-2017 AM402_RS08570 3813bf02b56e63ebc0d5bf8e9c323bac 128 Pfam PF01592 NifU-like N terminal domain 2 126 6.2E-57 T 06-07-2017 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM402_RS08570 3813bf02b56e63ebc0d5bf8e9c323bac 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 3.7E-70 T 06-07-2017 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM402_RS08570 3813bf02b56e63ebc0d5bf8e9c323bac 128 SUPERFAMILY SSF82649 1 125 1.81E-49 T 06-07-2017 AM402_RS02350 295e844b483f08be3556b39acc7b8659 485 SUPERFAMILY SSF53300 319 461 6.16E-18 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS02350 295e844b483f08be3556b39acc7b8659 485 SMART SM00327 321 485 9.3E-6 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS02350 295e844b483f08be3556b39acc7b8659 485 Hamap MF_01626 Protein ViaA [viaA]. 1 485 50.838 T 06-07-2017 IPR023481 Uncharacterised protein family ViaA AM402_RS02350 295e844b483f08be3556b39acc7b8659 485 Pfam PF05762 VWA domain containing CoxE-like protein 305 443 2.9E-10 T 06-07-2017 IPR008912 Uncharacterised protein family CoxE-like AM402_RS08195 fc44e898f6ed6c5f2d7d021b7d671b87 192 SUPERFAMILY SSF53254 24 122 3.85E-6 T 06-07-2017 IPR029033 Histidine phosphatase superfamily AM402_RS00995 5b3524fbd83c27b9c74de0dba22071be 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 06-07-2017 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00995 5b3524fbd83c27b9c74de0dba22071be 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.76 T 06-07-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM402_RS00995 5b3524fbd83c27b9c74de0dba22071be 100 SUPERFAMILY SSF54189 6 97 3.96E-31 T 06-07-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00995 5b3524fbd83c27b9c74de0dba22071be 100 Gene3D G3DSA:3.30.70.330 6 98 1.4E-34 T 06-07-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 AM402_RS00995 5b3524fbd83c27b9c74de0dba22071be 100 Pfam PF00276 Ribosomal protein L23 9 95 1.8E-31 T 06-07-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM402_RS06435 592bed03b2d7abfac185d33295e02d0f 223 Pfam PF04055 Radical SAM superfamily 26 124 3.5E-11 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS06435 592bed03b2d7abfac185d33295e02d0f 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.283 T 06-07-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM402_RS06435 592bed03b2d7abfac185d33295e02d0f 223 PIRSF PIRSF000370 1 223 2.5E-69 T 06-07-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM402_RS06435 592bed03b2d7abfac185d33295e02d0f 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 4.7E-106 T 06-07-2017 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM402_RS06435 592bed03b2d7abfac185d33295e02d0f 223 Gene3D G3DSA:3.20.20.70 29 122 6.5E-9 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS06435 592bed03b2d7abfac185d33295e02d0f 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 5.0E-13 T 06-07-2017 AM402_RS06435 592bed03b2d7abfac185d33295e02d0f 223 SUPERFAMILY SSF102114 24 119 9.42E-8 T 06-07-2017 AM402_RS21065 a352a3e0c959e2d28a8574ecdc98e0dc 341 Pfam PF13936 Helix-turn-helix domain 2 39 3.3E-7 T 06-07-2017 IPR025246 Transposase IS30-like HTH domain AM402_RS21065 a352a3e0c959e2d28a8574ecdc98e0dc 341 Gene3D G3DSA:1.10.10.60 2 41 9.3E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS21065 a352a3e0c959e2d28a8574ecdc98e0dc 341 Pfam PF00665 Integrase core domain 118 243 6.9E-23 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS21065 a352a3e0c959e2d28a8574ecdc98e0dc 341 SUPERFAMILY SSF53098 118 290 1.52E-18 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21065 a352a3e0c959e2d28a8574ecdc98e0dc 341 SUPERFAMILY SSF46689 2 39 9.41E-6 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS21065 a352a3e0c959e2d28a8574ecdc98e0dc 341 Gene3D G3DSA:3.30.420.10 118 288 3.5E-13 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21775 a352a3e0c959e2d28a8574ecdc98e0dc 341 Pfam PF13936 Helix-turn-helix domain 2 39 3.3E-7 T 06-07-2017 IPR025246 Transposase IS30-like HTH domain AM402_RS21775 a352a3e0c959e2d28a8574ecdc98e0dc 341 Gene3D G3DSA:1.10.10.60 2 41 9.3E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS21775 a352a3e0c959e2d28a8574ecdc98e0dc 341 Pfam PF00665 Integrase core domain 118 243 6.9E-23 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS21775 a352a3e0c959e2d28a8574ecdc98e0dc 341 SUPERFAMILY SSF53098 118 290 1.52E-18 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21775 a352a3e0c959e2d28a8574ecdc98e0dc 341 SUPERFAMILY SSF46689 2 39 9.41E-6 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS21775 a352a3e0c959e2d28a8574ecdc98e0dc 341 Gene3D G3DSA:3.30.420.10 118 288 3.5E-13 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 06-07-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.5E-27 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.0E-20 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.0E-20 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.0E-20 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 SUPERFAMILY SSF55594 1 82 3.66E-27 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 06-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 Gene3D G3DSA:3.30.1340.10 1 83 2.4E-32 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS08725 3ee553423482512451f27ef3aff4db7a 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 5.0E-29 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 SUPERFAMILY SSF47794 437 499 5.34E-16 T 06-07-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 348 8.0E-125 T 06-07-2017 IPR010213 Transcription termination factor NusA GO:0003723 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 SUPERFAMILY SSF47794 356 421 1.44E-16 T 06-07-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Pfam PF14520 Helix-hairpin-helix domain 377 418 0.0013 T 06-07-2017 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Pfam PF14520 Helix-hairpin-helix domain 439 493 8.0E-9 T 06-07-2017 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Gene3D G3DSA:3.30.300.20 199 277 1.8E-34 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 SUPERFAMILY SSF54814 201 278 2.22E-29 T 06-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Gene3D G3DSA:1.10.150.20 363 427 2.5E-22 T 06-07-2017 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 SUPERFAMILY SSF54814 279 334 1.26E-11 T 06-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 SMART SM00316 133 200 4.2E-9 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 447 496 1.5E-18 T 06-07-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 372 421 1.0E-20 T 06-07-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Gene3D G3DSA:3.30.300.20 278 353 7.2E-24 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Gene3D G3DSA:1.10.150.20 438 499 1.7E-22 T 06-07-2017 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Gene3D G3DSA:3.30.1480.10 1 124 1.0E-46 T 06-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 SUPERFAMILY SSF69705 1 126 4.19E-42 T 06-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Pfam PF13184 NusA-like KH domain 230 297 1.1E-27 T 06-07-2017 IPR025249 KH domain, NusA-like GO:0003723 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 SUPERFAMILY SSF50249 132 199 3.02E-17 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 417 27.705 T 06-07-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Gene3D G3DSA:2.40.50.140 128 197 1.1E-23 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Pfam PF08529 NusA N-terminal domain 4 123 1.6E-37 T 06-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM402_RS00135 97da2383b0dc0a8323a6a1a26697ed38 502 Pfam PF00575 S1 RNA binding domain 134 195 4.0E-5 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 Gene3D G3DSA:3.40.190.10 95 234 1.8E-34 T 06-07-2017 AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 Gene3D G3DSA:1.10.10.10 1 82 2.6E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 Pfam PF03466 LysR substrate binding domain 95 294 3.0E-31 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 SUPERFAMILY SSF46785 1 86 2.98E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 SUPERFAMILY SSF53850 95 303 1.67E-33 T 06-07-2017 AM402_RS01180 e287acfde79d04b7dabe99454f06d140 337 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.0E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS18685 a2f903371e00156e4ecb419c67fa0488 275 Gene3D G3DSA:1.20.5.460 252 275 1.7E-4 T 06-07-2017 AM402_RS18685 a2f903371e00156e4ecb419c67fa0488 275 Gene3D G3DSA:3.20.20.70 2 251 1.6E-133 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS18685 a2f903371e00156e4ecb419c67fa0488 275 SUPERFAMILY SSF51621 3 196 6.59E-84 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS18685 a2f903371e00156e4ecb419c67fa0488 275 PIRSF PIRSF034452 1 275 6.8E-160 T 06-07-2017 IPR009215 TIM-barrel domain, IGPS-like AM402_RS18685 a2f903371e00156e4ecb419c67fa0488 275 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 273 8.4E-135 T 06-07-2017 IPR009215 TIM-barrel domain, IGPS-like AM402_RS06610 9bdb3065f77b167c143847d1f3d39834 173 Pfam PF00419 Fimbrial protein 29 173 1.9E-13 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06610 9bdb3065f77b167c143847d1f3d39834 173 SUPERFAMILY SSF49401 27 173 1.09E-27 T 06-07-2017 IPR008966 Adhesion domain AM402_RS06610 9bdb3065f77b167c143847d1f3d39834 173 Gene3D G3DSA:2.60.40.1090 27 173 2.2E-29 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS15560 4dbbea382b43cea26b8792982b34d403 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 294 1.1E-22 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS15560 4dbbea382b43cea26b8792982b34d403 369 SUPERFAMILY SSF111369 50 289 2.48E-31 T 06-07-2017 AM402_RS15560 4dbbea382b43cea26b8792982b34d403 369 Gene3D G3DSA:2.40.50.100 183 214 6.6E-19 T 06-07-2017 AM402_RS15560 4dbbea382b43cea26b8792982b34d403 369 Gene3D G3DSA:2.40.50.100 61 94 6.6E-19 T 06-07-2017 AM402_RS15560 4dbbea382b43cea26b8792982b34d403 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 362 1.8E-57 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 281 788 1.5E-93 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 SUPERFAMILY SSF56784 509 529 2.63E-65 T 06-07-2017 IPR023214 HAD-like domain AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 SUPERFAMILY SSF56784 568 817 2.63E-65 T 06-07-2017 IPR023214 HAD-like domain AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Gene3D G3DSA:2.70.150.10 269 410 4.0E-33 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Pfam PF00122 E1-E2 ATPase 280 502 4.6E-67 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 ProSitePatterns PS01047 Heavy-metal-associated domain. 84 113 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 SUPERFAMILY SSF55008 9 75 4.32E-16 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00943 Copper-transporting ATPase signature 227 246 1.6E-12 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00943 Copper-transporting ATPase signature 783 797 1.6E-12 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00943 Copper-transporting ATPase signature 744 758 1.6E-12 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00943 Copper-transporting ATPase signature 432 446 1.6E-12 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00943 Copper-transporting ATPase signature 279 298 1.6E-12 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00943 Copper-transporting ATPase signature 494 509 1.6E-12 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00943 Copper-transporting ATPase signature 687 704 1.6E-12 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Gene3D G3DSA:3.40.1110.10 526 637 5.2E-27 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 513 519 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 SUPERFAMILY SSF55008 79 149 2.75E-18 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Pfam PF00702 haloacid dehalogenase-like hydrolase 508 724 1.6E-49 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Gene3D G3DSA:3.30.70.100 80 160 1.5E-20 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 242 819 2.4E-194 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Pfam PF00403 Heavy-metal-associated domain 82 142 7.8E-12 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Pfam PF00403 Heavy-metal-associated domain 15 74 2.0E-13 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 729 1.5E-29 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 511 525 1.5E-29 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 646 1.5E-29 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 733 745 1.5E-29 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 359 373 1.5E-29 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 667 1.5E-29 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 SUPERFAMILY SSF81665 759 798 2.75E-11 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 SUPERFAMILY SSF81665 410 505 2.75E-11 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 SUPERFAMILY SSF81665 262 313 2.75E-11 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 81 142 1.1E-8 T 06-07-2017 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 46 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Gene3D G3DSA:3.30.70.100 9 75 5.7E-20 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Gene3D G3DSA:3.40.50.1000 482 525 4.6E-62 T 06-07-2017 IPR023214 HAD-like domain AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 Gene3D G3DSA:3.40.50.1000 638 779 4.6E-62 T 06-07-2017 IPR023214 HAD-like domain AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 224 820 1.9E-182 T 06-07-2017 AM402_RS07500 c97bab9a4a871cc3d244b29a4f989b09 829 SUPERFAMILY SSF81653 313 409 7.85E-30 T 06-07-2017 AM402_RS06840 b9f8923f16e2c8199e7f2b95e5a0facd 341 SUPERFAMILY SSF82861 78 161 1.02E-10 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM402_RS06840 b9f8923f16e2c8199e7f2b95e5a0facd 341 Gene3D G3DSA:3.30.70.100 233 321 3.1E-13 T 06-07-2017 AM402_RS06840 b9f8923f16e2c8199e7f2b95e5a0facd 341 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 194 228 - T 06-07-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM402_RS06840 b9f8923f16e2c8199e7f2b95e5a0facd 341 SUPERFAMILY SSF50182 162 228 7.19E-17 T 06-07-2017 IPR010920 LSM domain AM402_RS06840 b9f8923f16e2c8199e7f2b95e5a0facd 341 Gene3D G3DSA:2.30.30.60 178 228 6.1E-15 T 06-07-2017 AM402_RS06840 b9f8923f16e2c8199e7f2b95e5a0facd 341 Pfam PF00924 Mechanosensitive ion channel 120 323 3.7E-60 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM402_RS06840 b9f8923f16e2c8199e7f2b95e5a0facd 341 SUPERFAMILY SSF82689 231 335 1.96E-19 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM402_RS00525 608a88e49a00e5a4451c79c4c860a305 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 153 1.2E-14 T 06-07-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 AM402_RS00525 608a88e49a00e5a4451c79c4c860a305 155 SUPERFAMILY SSF54637 13 153 1.04E-22 T 06-07-2017 IPR029069 HotDog domain AM402_RS00525 608a88e49a00e5a4451c79c4c860a305 155 Gene3D G3DSA:3.10.129.10 18 154 1.5E-28 T 06-07-2017 IPR029069 HotDog domain AM402_RS00525 608a88e49a00e5a4451c79c4c860a305 155 Pfam PF03061 Thioesterase superfamily 58 143 4.6E-14 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 SMART SM00382 49 165 1.4E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 Pfam PF16193 AAA C-terminal domain 188 267 6.9E-22 T 06-07-2017 IPR032423 AAA ATPase, C-terminal domain AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 SUPERFAMILY SSF48019 252 434 3.0E-71 T 06-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 Gene3D G3DSA:1.10.8.60 155 242 1.1E-8 T 06-07-2017 AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 138 3.4E-17 T 06-07-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 SUPERFAMILY SSF52540 6 240 3.61E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 Gene3D G3DSA:3.40.50.300 12 154 5.1E-31 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 Gene3D G3DSA:1.20.272.10 249 347 4.4E-43 T 06-07-2017 AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 9.7E-65 T 06-07-2017 IPR021886 MgsA AAA+ ATPase C-terminal AM402_RS15495 04714692b9c5308d436bf770a6aea98f 449 Gene3D G3DSA:1.10.3710.10 348 445 9.8E-33 T 06-07-2017 AM402_RS06255 cb95232b42351287d9801ecab96604ec 242 Pfam PF00696 Amino acid kinase family 11 219 5.1E-28 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS06255 cb95232b42351287d9801ecab96604ec 242 SUPERFAMILY SSF53633 7 240 4.32E-72 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS06255 cb95232b42351287d9801ecab96604ec 242 PIRSF PIRSF005650 4 242 2.8E-89 T 06-07-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AM402_RS06255 cb95232b42351287d9801ecab96604ec 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.842 T 06-07-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM402_RS06255 cb95232b42351287d9801ecab96604ec 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.1E-102 T 06-07-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM402_RS06255 cb95232b42351287d9801ecab96604ec 242 Gene3D G3DSA:3.40.1160.10 3 240 1.0E-85 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Gene3D G3DSA:1.10.1240.10 650 734 3.4E-38 T 06-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Pfam PF00809 Pterin binding enzyme 358 596 9.2E-62 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 SUPERFAMILY SSF47644 650 735 1.96E-28 T 06-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 SUPERFAMILY SSF82282 5 397 6.28E-119 T 06-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Gene3D G3DSA:3.20.20.330 3 361 3.5E-127 T 06-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 SMART SM01018 654 737 1.2E-43 T 06-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Gene3D G3DSA:3.10.196.10 954 1222 1.1E-113 T 06-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 SUPERFAMILY SSF56507 900 1223 2.09E-134 T 06-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Pfam PF02310 B12 binding domain 745 837 1.1E-18 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 TIGRFAM TIGR02082 metH: methionine synthase 11 1189 0.0 T 06-07-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 SUPERFAMILY SSF51717 354 628 3.01E-88 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 SUPERFAMILY SSF52242 741 891 4.84E-46 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Pfam PF02574 Homocysteine S-methyltransferase 15 323 2.0E-92 T 06-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 PIRSF PIRSF000381 1 1192 0.0 T 06-07-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Gene3D G3DSA:3.40.50.280 742 891 2.8E-64 T 06-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 935 1205 6.0E-124 T 06-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Gene3D G3DSA:3.20.20.20 362 634 1.4E-112 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS03840 87bcd2b49383fdfe13013fdb1928763a 1223 Pfam PF02607 B12 binding domain 656 730 6.4E-24 T 06-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS12500 37e5aa914d84700c41f39f2f750cbc93 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 122 2.6E-10 T 06-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM402_RS12500 37e5aa914d84700c41f39f2f750cbc93 127 Gene3D G3DSA:3.10.180.10 7 124 2.6E-32 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM402_RS12500 37e5aa914d84700c41f39f2f750cbc93 127 SUPERFAMILY SSF54593 3 123 2.89E-23 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM402_RS12605 e9daad5b966d263d2116cfbdc3586235 203 Gene3D G3DSA:1.10.3480.10 2 202 1.5E-54 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone AM402_RS12605 e9daad5b966d263d2116cfbdc3586235 203 SUPERFAMILY SSF89155 4 202 7.59E-47 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone AM402_RS12605 e9daad5b966d263d2116cfbdc3586235 203 Pfam PF02613 Nitrate reductase delta subunit 44 160 1.5E-23 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone AM402_RS12605 e9daad5b966d263d2116cfbdc3586235 203 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 4 203 41.692 T 06-07-2017 IPR028611 Tat proofreading chaperone DmsD GO:0005048 AM402_RS12605 e9daad5b966d263d2116cfbdc3586235 203 PIRSF PIRSF004690 1 202 1.6E-62 T 06-07-2017 IPR026269 Tat proofreading chaperone DmsD-type AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 SUPERFAMILY SSF50494 42 264 4.25E-66 T 06-07-2017 IPR009003 Peptidase S1, PA clan AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 Gene3D G3DSA:2.30.42.10 393 456 1.1E-15 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 PRINTS PR00834 HtrA/DegQ protease family signature 128 148 3.9E-59 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 3.9E-59 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 PRINTS PR00834 HtrA/DegQ protease family signature 107 119 3.9E-59 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 PRINTS PR00834 HtrA/DegQ protease family signature 169 193 3.9E-59 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 PRINTS PR00834 HtrA/DegQ protease family signature 312 324 3.9E-59 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 PRINTS PR00834 HtrA/DegQ protease family signature 204 221 3.9E-59 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 Pfam PF13365 Trypsin-like peptidase domain 97 233 1.0E-31 T 06-07-2017 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 SUPERFAMILY SSF50156 230 355 1.45E-22 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 44 457 6.1E-158 T 06-07-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 Gene3D G3DSA:2.40.10.10 42 161 2.1E-35 T 06-07-2017 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 Pfam PF13180 PDZ domain 283 363 5.3E-14 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 Gene3D G3DSA:2.40.10.10 162 273 1.1E-43 T 06-07-2017 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 SUPERFAMILY SSF50156 389 459 1.08E-13 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 SMART SM00228 379 451 4.9E-6 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 SMART SM00228 272 354 5.6E-12 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 382 447 2.0E-9 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19680 e8e0290c7e4a3080820469ed1053649f 463 Gene3D G3DSA:2.30.42.10 274 369 9.9E-29 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19345 05190b78faa1d2029f39b19da48e7488 86 SUPERFAMILY SSF46992 3 86 1.01E-31 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS19345 05190b78faa1d2029f39b19da48e7488 86 Pfam PF01649 Ribosomal protein S20 2 84 8.5E-29 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS19345 05190b78faa1d2029f39b19da48e7488 86 Gene3D G3DSA:1.20.58.110 3 86 4.1E-32 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS19345 05190b78faa1d2029f39b19da48e7488 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.483 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS19345 05190b78faa1d2029f39b19da48e7488 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.8E-32 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS19345 05190b78faa1d2029f39b19da48e7488 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 2.0E-31 T 06-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS15085 60229a77401a04046989be61e5b62c90 380 SUPERFAMILY SSF141673 4 132 2.75E-28 T 06-07-2017 AM402_RS15085 60229a77401a04046989be61e5b62c90 380 Gene3D G3DSA:3.10.20.30 283 377 9.6E-20 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS15085 60229a77401a04046989be61e5b62c90 380 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 331 339 - T 06-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM402_RS15085 60229a77401a04046989be61e5b62c90 380 Pfam PF03473 MOSC domain 137 261 1.4E-27 T 06-07-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM402_RS15085 60229a77401a04046989be61e5b62c90 380 SUPERFAMILY SSF50800 147 264 1.1E-16 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain AM402_RS15085 60229a77401a04046989be61e5b62c90 380 SUPERFAMILY SSF50800 3 50 1.1E-16 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain AM402_RS15085 60229a77401a04046989be61e5b62c90 380 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 306 370 2.2E-12 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS15085 60229a77401a04046989be61e5b62c90 380 SUPERFAMILY SSF54292 288 377 2.75E-20 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS15085 60229a77401a04046989be61e5b62c90 380 Pfam PF03476 MOSC N-terminal beta barrel domain 1 116 2.8E-28 T 06-07-2017 IPR005303 MOSC, N-terminal beta barrel AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 SUPERFAMILY SSF63411 505 730 1.92E-38 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 SUPERFAMILY SSF63411 34 262 6.98E-50 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 SUPERFAMILY SSF63411 266 503 5.33E-64 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 Gene3D G3DSA:3.30.830.10 508 732 1.3E-52 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 Pfam PF05193 Peptidase M16 inactive domain 217 395 1.2E-19 T 06-07-2017 IPR007863 Peptidase M16, C-terminal AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 Pfam PF05193 Peptidase M16 inactive domain 682 858 3.8E-10 T 06-07-2017 IPR007863 Peptidase M16, C-terminal AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 Gene3D G3DSA:3.30.830.10 31 264 6.0E-65 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 76 99 - T 06-07-2017 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 1.7E-33 T 06-07-2017 IPR011765 Peptidase M16, N-terminal AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 Gene3D G3DSA:3.30.830.10 733 958 3.3E-49 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 SUPERFAMILY SSF63411 746 956 2.67E-39 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 Gene3D G3DSA:3.30.830.10 275 507 1.2E-60 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS06105 413b663080ba69f70bf53b40e846b644 962 Pfam PF16187 Middle or third domain of peptidase_M16 401 679 9.1E-58 T 06-07-2017 IPR032632 Peptidase M16, middle/third domain AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 Gene3D G3DSA:1.10.1520.10 6 148 1.8E-49 T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 SUPERFAMILY SSF69065 6 159 4.01E-51 T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 SMART SM00358 156 224 4.2E-21 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 4.5E-13 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 SMART SM00535 21 149 6.2E-59 T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 Pfam PF14622 Ribonuclease-III-like 20 141 3.6E-35 T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 4.4E-75 T 06-07-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 06-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 Gene3D G3DSA:3.30.160.20 153 223 2.3E-27 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.65 T 06-07-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM402_RS08415 ba7a5ac16f803b930a8c8d94af08fe8e 226 SUPERFAMILY SSF54768 109 223 1.27E-27 T 06-07-2017 AM402_RS00050 208195be6a86a99c4d4fa77da9d16a3c 323 Gene3D G3DSA:2.40.50.100 40 72 4.3E-14 T 06-07-2017 AM402_RS00050 208195be6a86a99c4d4fa77da9d16a3c 323 Gene3D G3DSA:2.40.50.100 199 231 4.3E-14 T 06-07-2017 AM402_RS00050 208195be6a86a99c4d4fa77da9d16a3c 323 Pfam PF13533 Biotin-lipoyl like 40 85 5.4E-8 T 06-07-2017 AM402_RS00050 208195be6a86a99c4d4fa77da9d16a3c 323 SUPERFAMILY SSF111369 175 253 4.45E-7 T 06-07-2017 AM402_RS00050 208195be6a86a99c4d4fa77da9d16a3c 323 SUPERFAMILY SSF111369 35 94 1.16E-6 T 06-07-2017 AM402_RS00050 208195be6a86a99c4d4fa77da9d16a3c 323 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 159 285 5.6E-12 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS04800 738bcf7a7fee7c0913905458e2db0861 955 Gene3D G3DSA:3.40.50.300 524 589 1.4E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04800 738bcf7a7fee7c0913905458e2db0861 955 Gene3D G3DSA:3.40.50.300 744 863 1.4E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04800 738bcf7a7fee7c0913905458e2db0861 955 SUPERFAMILY SSF52540 474 598 3.01E-29 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04800 738bcf7a7fee7c0913905458e2db0861 955 SUPERFAMILY SSF52540 636 872 3.01E-29 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04800 738bcf7a7fee7c0913905458e2db0861 955 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 53 948 0.0 T 06-07-2017 IPR022303 Conjugative transfer ATPase AM402_RS04800 738bcf7a7fee7c0913905458e2db0861 955 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 64 331 1.9E-74 T 06-07-2017 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 467 602 4.7E-17 T 06-07-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 SUPERFAMILY SSF51735 459 632 4.38E-30 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 ProSitePatterns PS00324 Aspartokinase signature. 17 25 - T 06-07-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 Gene3D G3DSA:3.30.360.10 631 788 2.3E-52 T 06-07-2017 AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 Gene3D G3DSA:3.40.50.720 459 630 1.6E-51 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 656 678 - T 06-07-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 Pfam PF00696 Amino acid kinase family 16 287 8.6E-41 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 Gene3D G3DSA:3.40.1160.10 15 62 2.4E-46 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 Gene3D G3DSA:3.40.1160.10 94 302 2.4E-46 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 PIRSF PIRSF000727 15 812 3.9E-285 T 06-07-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 18 455 3.6E-64 T 06-07-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 SUPERFAMILY SSF53633 16 302 4.71E-57 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 Pfam PF00742 Homoserine dehydrogenase 610 805 3.6E-44 T 06-07-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM402_RS01210 310b59602d7c2ff83e6ba094c534b844 812 SUPERFAMILY SSF55347 610 793 2.29E-46 T 06-07-2017 AM402_RS05075 70c7e7c3b6e35ee4b01085b70f863498 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 6 134 9.7E-57 T 06-07-2017 IPR010005 Formate hydrogenlyase maturation HycH AM402_RS05075 70c7e7c3b6e35ee4b01085b70f863498 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 134 1.0E-40 T 06-07-2017 IPR010005 Formate hydrogenlyase maturation HycH AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 18 493 2.5E-108 T 06-07-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 SUPERFAMILY SSF69349 432 606 7.85E-36 T 06-07-2017 AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 Gene3D G3DSA:3.55.50.10 95 183 5.5E-23 T 06-07-2017 AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 Pfam PF05954 Phage late control gene D protein (GPD) 26 322 1.2E-68 T 06-07-2017 AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 Gene3D G3DSA:2.40.50.230 362 441 9.9E-34 T 06-07-2017 IPR006531 Gp5 N-terminal AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 SUPERFAMILY SSF69255 354 441 3.66E-28 T 06-07-2017 AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 SUPERFAMILY SSF69279 183 355 1.17E-34 T 06-07-2017 AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 510 2.0E-162 T 06-07-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM402_RS12060 5f2d7f9208941c7b6293ee0dc5851db5 657 SUPERFAMILY SSF69279 8 182 2.32E-43 T 06-07-2017 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.4E-22 T 06-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 06-07-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.316 T 06-07-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.6E-23 T 06-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 06-07-2017 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 1.7E-111 T 06-07-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 Gene3D G3DSA:3.30.1360.10 9 51 1.7E-10 T 06-07-2017 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 06-07-2017 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 SUPERFAMILY SSF56553 53 178 7.85E-42 T 06-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 Gene3D G3DSA:2.170.120.12 53 177 9.5E-40 T 06-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 SMART SM00662 23 234 3.3E-103 T 06-07-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 SUPERFAMILY SSF55257 179 231 5.89E-30 T 06-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 SUPERFAMILY SSF55257 6 53 5.89E-30 T 06-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS00880 8faaf98d2c8a4f63f39b91f15fe18c84 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 06-07-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 8.0E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 8.0E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 8.0E-11 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 3.3E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 SUPERFAMILY SSF47384 120 186 1.12E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 SMART SM00387 233 348 9.0E-27 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 Gene3D G3DSA:3.30.565.10 198 347 7.1E-36 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 Gene3D G3DSA:3.30.450.20 11 102 5.1E-18 T 06-07-2017 AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 SUPERFAMILY SSF55874 198 346 1.96E-34 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 SUPERFAMILY SSF55785 11 100 4.04E-7 T 06-07-2017 IPR000014 PAS domain AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 Gene3D G3DSA:1.10.287.130 122 186 1.2E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 346 2.3E-15 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 SMART SM00091 7 75 3.1E-6 T 06-07-2017 IPR000014 PAS domain AM402_RS03225 6fd1a3198d2dc6352061537ae7692611 348 SMART SM00388 129 194 8.5E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 PIRSF PIRSF001554 1 388 5.2E-155 T 06-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 Gene3D G3DSA:3.30.470.20 96 239 1.9E-56 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 Pfam PF08442 ATP-grasp domain 2 203 1.3E-82 T 06-07-2017 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 Pfam PF00549 CoA-ligase 262 382 9.7E-25 T 06-07-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 06-07-2017 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 Gene3D G3DSA:3.30.1490.20 22 95 1.6E-35 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 SUPERFAMILY SSF56059 1 238 2.65E-81 T 06-07-2017 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 SUPERFAMILY SSF52210 239 385 1.31E-52 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.852 T 06-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.2E-179 T 06-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM402_RS16165 13110d2b9a8535c58aca244c73ea8087 388 Gene3D G3DSA:3.40.50.261 240 383 3.2E-65 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS10180 8d601514a3cb239609ceb4ac6fda7161 185 SUPERFAMILY SSF55021 6 83 3.25E-16 T 06-07-2017 AM402_RS10180 8d601514a3cb239609ceb4ac6fda7161 185 SUPERFAMILY SSF55021 92 178 1.87E-13 T 06-07-2017 AM402_RS10180 8d601514a3cb239609ceb4ac6fda7161 185 Gene3D G3DSA:3.30.70.260 6 84 2.1E-28 T 06-07-2017 AM402_RS10180 8d601514a3cb239609ceb4ac6fda7161 185 Pfam PF13740 ACT domain 7 82 7.6E-25 T 06-07-2017 AM402_RS10180 8d601514a3cb239609ceb4ac6fda7161 185 Pfam PF13710 ACT domain 104 170 3.8E-12 T 06-07-2017 AM402_RS10180 8d601514a3cb239609ceb4ac6fda7161 185 Gene3D G3DSA:3.30.70.260 92 180 1.6E-31 T 06-07-2017 AM402_RS10180 8d601514a3cb239609ceb4ac6fda7161 185 PIRSF PIRSF028103 5 180 1.2E-54 T 06-07-2017 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 Pfam PF08279 HTH domain 13 59 9.6E-11 T 06-07-2017 IPR013196 Helix-turn-helix, type 11 AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 Gene3D G3DSA:1.10.10.10 1 63 8.5E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 SUPERFAMILY SSF55681 76 268 1.06E-58 T 06-07-2017 AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.586 T 06-07-2017 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 SUPERFAMILY SSF50037 271 317 6.87E-11 T 06-07-2017 IPR008988 Transcriptional repressor, C-terminal AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 Gene3D G3DSA:3.30.930.10 77 268 1.3E-59 T 06-07-2017 AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 5.2E-22 T 06-07-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 Gene3D G3DSA:2.30.30.100 271 319 8.0E-23 T 06-07-2017 AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 317 4.0E-74 T 06-07-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 SUPERFAMILY SSF46785 2 60 8.05E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01060 914f9306d3fc2352b2721432cc0ad865 320 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 1.7E-11 T 06-07-2017 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS09195 c1a4fe635023aab8e29212e7d74c3bbc 442 Gene3D G3DSA:3.60.120.10 21 439 4.7E-80 T 06-07-2017 IPR005801 ADC synthase GO:0009058 AM402_RS09195 c1a4fe635023aab8e29212e7d74c3bbc 442 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 440 39.183 T 06-07-2017 AM402_RS09195 c1a4fe635023aab8e29212e7d74c3bbc 442 SUPERFAMILY SSF56322 20 438 2.88E-90 T 06-07-2017 IPR005801 ADC synthase GO:0009058 AM402_RS09195 c1a4fe635023aab8e29212e7d74c3bbc 442 Pfam PF00425 chorismate binding enzyme 179 430 3.1E-60 T 06-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal AM402_RS09195 c1a4fe635023aab8e29212e7d74c3bbc 442 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 117 437 7.8E-97 T 06-07-2017 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM402_RS15455 9b961b83d38f3d29894aabd043b2bd83 585 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 3.7E-79 T 06-07-2017 IPR003776 YcaO-like domain AM402_RS15455 9b961b83d38f3d29894aabd043b2bd83 585 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 2.8E-156 T 06-07-2017 IPR003776 YcaO-like domain AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 24 648 0.0 T 06-07-2017 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 SUPERFAMILY SSF55816 358 599 1.29E-36 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 Pfam PF02872 5'-nucleotidase, C-terminal domain 358 552 1.4E-23 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 PRINTS PR01607 Apyrase family signature 532 551 1.2E-31 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 PRINTS PR01607 Apyrase family signature 24 42 1.2E-31 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 PRINTS PR01607 Apyrase family signature 245 268 1.2E-31 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 PRINTS PR01607 Apyrase family signature 285 305 1.2E-31 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 PRINTS PR01607 Apyrase family signature 217 234 1.2E-31 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 PRINTS PR01607 Apyrase family signature 430 453 1.2E-31 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 SUPERFAMILY SSF56300 21 355 6.64E-84 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 Gene3D G3DSA:3.90.780.10 358 598 5.5E-44 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 Pfam PF00149 Calcineurin-like phosphoesterase 26 261 5.3E-10 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 Gene3D G3DSA:3.60.21.10 20 354 3.3E-93 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS19185 e7a541065f384c77daf6cc306db0d5d1 651 ProSitePatterns PS00785 5'-nucleotidase signature 1. 26 38 - T 06-07-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 SUPERFAMILY SSF52540 90 371 1.04E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 SMART SM00959 5 47 1.2E-17 T 06-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.5E-22 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 250.156 T 06-07-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 SMART SM00382 170 355 4.3E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 SUPERFAMILY SSF68912 1 46 3.37E-12 T 06-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 Gene3D G3DSA:2.40.50.140 49 117 5.5E-37 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.1E-17 T 06-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.7E-32 T 06-07-2017 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 Gene3D G3DSA:3.40.50.300 132 418 4.6E-106 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 SMART SM00357 52 118 9.7E-18 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 SUPERFAMILY SSF50249 48 125 1.2E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.2E-221 T 06-07-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM402_RS00685 c2d3d5ef281df50319cbb5e0eeda9ad7 419 Gene3D G3DSA:1.10.720.10 1 47 2.7E-22 T 06-07-2017 AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 SMART SM00382 82 374 1.4E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 Gene3D G3DSA:3.40.50.300 263 406 6.4E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 577 689 8.4E-16 T 06-07-2017 IPR011709 Domain of unknown function DUF1605 AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 SUPERFAMILY SSF52540 64 621 6.76E-114 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 Pfam PF00271 Helicase conserved C-terminal domain 273 393 8.2E-11 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 SMART SM00487 64 249 4.1E-27 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 Pfam PF04408 Helicase associated domain (HA2) 456 549 8.4E-15 T 06-07-2017 IPR007502 Helicase-associated domain GO:0004386 AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 Gene3D G3DSA:3.40.50.300 67 223 1.9E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 SMART SM00490 294 394 1.9E-14 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 Pfam PF11898 Domain of unknown function (DUF3418) 704 1287 7.8E-238 T 06-07-2017 IPR024590 RNA helicase HrpA, C-terminal AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 SMART SM00847 454 550 6.3E-35 T 06-07-2017 IPR007502 Helicase-associated domain GO:0004386 AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 3 1287 0.0 T 06-07-2017 IPR010222 RNA helicase HrpA GO:0004004 AM402_RS12805 a6a9982056cabb08453bcf3b6a6a98c6 1292 Pfam PF00270 DEAD/DEAH box helicase 75 223 2.0E-6 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 2.6E-25 T 06-07-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 06-07-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:3.90.1110.10 346 444 9.1E-67 T 06-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:3.90.1110.10 153 230 9.1E-67 T 06-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.336 T 06-07-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 06-07-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.1E-56 T 06-07-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:2.30.150.10 592 656 5.5E-29 T 06-07-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:2.40.50.100 715 792 8.5E-31 T 06-07-2017 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 SUPERFAMILY SSF64484 343 939 0.0 T 06-07-2017 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 SUPERFAMILY SSF64484 12 226 0.0 T 06-07-2017 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 06-07-2017 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 06-07-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.9E-147 T 06-07-2017 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.9E-147 T 06-07-2017 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.9E-147 T 06-07-2017 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 06-07-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:2.40.50.150 828 937 7.9E-58 T 06-07-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:2.40.50.150 1045 1059 7.9E-58 T 06-07-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 7.0E-160 T 06-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:2.40.270.10 793 820 2.4E-88 T 06-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Gene3D G3DSA:2.40.270.10 1060 1242 2.4E-88 T 06-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 1.4E-17 T 06-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03680 4b2b050ffb054a1147cc32da99eb8a29 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 237 1.4E-8 T 06-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 Pfam PF00072 Response regulator receiver domain 4 116 1.5E-25 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 SUPERFAMILY SSF46894 133 206 2.65E-20 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 1.6E-18 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 Gene3D G3DSA:1.10.10.10 145 205 2.0E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 SMART SM00448 2 115 5.6E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.4E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.4E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.4E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 SUPERFAMILY SSF52172 1 125 2.28E-30 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 SMART SM00421 143 200 1.2E-19 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 Gene3D G3DSA:3.40.50.2300 1 144 1.5E-35 T 06-07-2017 AM402_RS18505 f06d19f8cadbc1a3f6722f6f90c58c7c 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 Pfam PF02050 Flagellar FliJ protein 19 141 9.7E-32 T 06-07-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 PIRSF PIRSF019404 1 148 6.4E-46 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 5.7E-31 T 06-07-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 PRINTS PR01004 Flagellar FliJ protein signature 127 147 4.9E-27 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 PRINTS PR01004 Flagellar FliJ protein signature 87 108 4.9E-27 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 4.9E-27 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 4.9E-27 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 PRINTS PR01004 Flagellar FliJ protein signature 64 85 4.9E-27 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM402_RS09790 d4917d2f970e0799f188836c0c2fc2a5 148 PRINTS PR01004 Flagellar FliJ protein signature 109 127 4.9E-27 T 06-07-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 Pfam PF14697 4Fe-4S dicluster domain 110 163 1.0E-16 T 06-07-2017 AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 Gene3D G3DSA:3.30.70.20 111 178 1.5E-17 T 06-07-2017 AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 SUPERFAMILY SSF54862 38 176 3.28E-30 T 06-07-2017 AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 Pfam PF04060 Putative Fe-S cluster 44 76 1.3E-12 T 06-07-2017 IPR007202 4Fe-4S domain GO:0051536 AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 189 3.0E-85 T 06-07-2017 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 PIRSF PIRSF005784 3 191 6.6E-85 T 06-07-2017 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS12180 a251a089ece5007219cbe08790bbe3e6 208 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.395 T 06-07-2017 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 SUPERFAMILY SSF46785 1 84 1.56E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.7E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.7E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.7E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 Gene3D G3DSA:3.40.190.10 201 261 4.5E-13 T 06-07-2017 AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 Gene3D G3DSA:3.40.190.10 84 200 1.5E-12 T 06-07-2017 AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 SUPERFAMILY SSF53850 102 291 1.45E-22 T 06-07-2017 AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 Gene3D G3DSA:1.10.10.10 1 83 3.3E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01970 73210ff97f0627aab3c489cb8596df6a 295 Pfam PF03466 LysR substrate binding domain 101 276 6.4E-24 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS12705 536af404d16b9230211378d8f764ce0c 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 7.2E-7 T 06-07-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS12705 536af404d16b9230211378d8f764ce0c 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 4.8E-103 T 06-07-2017 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM402_RS12705 536af404d16b9230211378d8f764ce0c 187 Gene3D G3DSA:3.40.30.10 4 183 1.3E-59 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS12705 536af404d16b9230211378d8f764ce0c 187 Pfam PF00578 AhpC/TSA family 10 133 1.1E-33 T 06-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS12705 536af404d16b9230211378d8f764ce0c 187 PIRSF PIRSF000239 3 187 7.5E-52 T 06-07-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS12705 536af404d16b9230211378d8f764ce0c 187 SUPERFAMILY SSF52833 1 186 3.39E-54 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS06795 0806fc27474434b483fa465113d87359 984 Gene3D G3DSA:3.30.70.100 251 316 4.9E-25 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Gene3D G3DSA:3.30.70.100 71 133 4.7E-11 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Gene3D G3DSA:3.40.50.1000 796 936 3.2E-55 T 06-07-2017 IPR023214 HAD-like domain AM402_RS06795 0806fc27474434b483fa465113d87359 984 Gene3D G3DSA:3.40.50.1000 644 685 3.2E-55 T 06-07-2017 IPR023214 HAD-like domain AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00943 Copper-transporting ATPase signature 654 669 2.4E-8 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00943 Copper-transporting ATPase signature 592 606 2.4E-8 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00943 Copper-transporting ATPase signature 845 862 2.4E-8 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00943 Copper-transporting ATPase signature 291 311 2.4E-8 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00943 Copper-transporting ATPase signature 387 406 2.4E-8 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00943 Copper-transporting ATPase signature 459 477 2.4E-8 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 441 945 3.0E-89 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF81653 472 569 7.45E-25 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Gene3D G3DSA:3.30.70.100 3 65 3.5E-13 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 ProSitePatterns PS01229 Hypothetical cof family signature 2. 868 890 - T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Pfam PF00122 E1-E2 ATPase 440 661 1.9E-62 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Gene3D G3DSA:3.30.70.100 140 201 2.3E-18 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF55008 137 206 4.32E-15 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Gene3D G3DSA:2.70.150.10 416 570 7.8E-28 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF81665 570 665 8.37E-11 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF81665 436 473 8.37E-11 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 402 977 7.4E-183 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM402_RS06795 0806fc27474434b483fa465113d87359 984 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 673 679 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF55008 71 137 2.88E-9 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF56784 669 689 2.02E-60 T 06-07-2017 IPR023214 HAD-like domain AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF56784 726 974 2.02E-60 T 06-07-2017 IPR023214 HAD-like domain AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF55008 251 316 3.01E-20 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Pfam PF00702 haloacid dehalogenase-like hydrolase 668 882 8.4E-50 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Pfam PF00403 Heavy-metal-associated domain 8 62 3.1E-7 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Pfam PF00403 Heavy-metal-associated domain 74 127 1.6E-5 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Pfam PF00403 Heavy-metal-associated domain 145 199 3.9E-10 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Pfam PF00403 Heavy-metal-associated domain 254 309 6.6E-16 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 ProSitePatterns PS01047 Heavy-metal-associated domain. 146 175 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 Gene3D G3DSA:3.40.1110.10 686 795 6.2E-19 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 793 804 2.6E-25 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 671 685 2.6E-25 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 891 903 2.6E-25 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 815 825 2.6E-25 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 868 887 2.6E-25 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 519 533 2.6E-25 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 383 977 3.1E-187 T 06-07-2017 AM402_RS06795 0806fc27474434b483fa465113d87359 984 SUPERFAMILY SSF55008 3 65 3.8E-10 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS06795 0806fc27474434b483fa465113d87359 984 ProSitePatterns PS01047 Heavy-metal-associated domain. 255 284 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS18550 3640a097526b683a806985126f3ec7f2 625 SUPERFAMILY SSF56059 497 614 4.24E-74 T 06-07-2017 AM402_RS18550 3640a097526b683a806985126f3ec7f2 625 SUPERFAMILY SSF56059 203 380 4.24E-74 T 06-07-2017 AM402_RS18550 3640a097526b683a806985126f3ec7f2 625 Pfam PF05257 CHAP domain 52 149 3.7E-13 T 06-07-2017 IPR007921 CHAP domain AM402_RS18550 3640a097526b683a806985126f3ec7f2 625 SUPERFAMILY SSF52440 381 510 5.47E-37 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS18550 3640a097526b683a806985126f3ec7f2 625 SUPERFAMILY SSF54001 11 197 3.43E-59 T 06-07-2017 AM402_RS18550 3640a097526b683a806985126f3ec7f2 625 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 250 615 1.4E-65 T 06-07-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AM402_RS01785 b12b716ccfffbae02bed720f5e27ac5b 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.308 T 06-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01785 b12b716ccfffbae02bed720f5e27ac5b 55 SUPERFAMILY SSF57829 1 53 4.27E-20 T 06-07-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM402_RS01785 b12b716ccfffbae02bed720f5e27ac5b 55 Pfam PF00471 Ribosomal protein L33 7 53 7.5E-18 T 06-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01785 b12b716ccfffbae02bed720f5e27ac5b 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 06-07-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01785 b12b716ccfffbae02bed720f5e27ac5b 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.8E-26 T 06-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS06720 fa1ffe4c52e429455feab701de9f0ec3 315 Pfam PF00294 pfkB family carbohydrate kinase 2 295 1.9E-61 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS06720 fa1ffe4c52e429455feab701de9f0ec3 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 26 50 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS06720 fa1ffe4c52e429455feab701de9f0ec3 315 SUPERFAMILY SSF53613 1 302 1.37E-72 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS06720 fa1ffe4c52e429455feab701de9f0ec3 315 Gene3D G3DSA:3.40.1190.20 1 305 3.7E-76 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS06720 fa1ffe4c52e429455feab701de9f0ec3 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 241 254 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 06-07-2017 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 Pfam PF03104 DNA polymerase family B, exonuclease domain 75 299 2.2E-14 T 06-07-2017 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 SUPERFAMILY SSF56672 388 779 5.56E-114 T 06-07-2017 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 Gene3D G3DSA:3.90.1600.10 396 434 1.7E-11 T 06-07-2017 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 Gene3D G3DSA:3.90.1600.10 515 641 1.7E-11 T 06-07-2017 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 SUPERFAMILY SSF53098 6 392 3.63E-89 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 7.0E-10 T 06-07-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 418 431 7.0E-10 T 06-07-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 7.0E-10 T 06-07-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 SMART SM00486 147 558 2.1E-64 T 06-07-2017 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 Gene3D G3DSA:3.30.420.10 147 366 5.2E-33 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS06035 65002dbcac4958df07bac89250094d4b 784 Pfam PF00136 DNA polymerase family B 380 734 1.4E-41 T 06-07-2017 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS10260 6dde2d8f0bb25c9ed474a68172a7d3eb 269 SUPERFAMILY SSF74653 166 261 6.8E-17 T 06-07-2017 AM402_RS10260 6dde2d8f0bb25c9ed474a68172a7d3eb 269 Gene3D G3DSA:3.30.1150.10 163 265 1.8E-15 T 06-07-2017 AM402_RS10260 6dde2d8f0bb25c9ed474a68172a7d3eb 269 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 189 265 5.9E-17 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS10260 6dde2d8f0bb25c9ed474a68172a7d3eb 269 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 187 265 1.7E-15 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS15445 94b4e9a076c9db629f142a6fe3ee891a 421 Pfam PF05860 haemagglutination activity domain 39 149 3.9E-21 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS15445 94b4e9a076c9db629f142a6fe3ee891a 421 SMART SM00912 53 150 8.8E-11 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS15445 94b4e9a076c9db629f142a6fe3ee891a 421 SUPERFAMILY SSF51126 57 322 2.45E-21 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS15445 94b4e9a076c9db629f142a6fe3ee891a 421 Gene3D G3DSA:2.160.20.10 52 321 6.3E-38 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS15445 94b4e9a076c9db629f142a6fe3ee891a 421 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 67 145 3.5E-17 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS11860 c48b446221e91a4a456efb69c7b39862 348 Pfam PF05128 Domain of unknown function (DUF697) 181 339 1.5E-54 T 06-07-2017 IPR021147 Protein of unknown function DUF697 AM402_RS11860 c48b446221e91a4a456efb69c7b39862 348 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 345 36.933 T 06-07-2017 IPR006507 Uncharacterised protein family UPF0283 AM402_RS11860 c48b446221e91a4a456efb69c7b39862 348 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 55 339 1.1E-129 T 06-07-2017 IPR006507 Uncharacterised protein family UPF0283 AM402_RS03245 b2d6e4ba7e6f6f72186672e66e2c7023 145 SUPERFAMILY SSF69500 1 144 1.7E-55 T 06-07-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain AM402_RS03245 b2d6e4ba7e6f6f72186672e66e2c7023 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 1.6E-50 T 06-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AM402_RS03245 b2d6e4ba7e6f6f72186672e66e2c7023 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.124 T 06-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AM402_RS03245 b2d6e4ba7e6f6f72186672e66e2c7023 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 3.5E-70 T 06-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AM402_RS03245 b2d6e4ba7e6f6f72186672e66e2c7023 145 Gene3D G3DSA:3.50.80.10 1 144 6.8E-56 T 06-07-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain AM402_RS05590 94f5c7846726f98736ba0df01a729935 433 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 8.4E-22 T 06-07-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM402_RS05590 94f5c7846726f98736ba0df01a729935 433 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 422 5.5E-151 T 06-07-2017 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AM402_RS05590 94f5c7846726f98736ba0df01a729935 433 Pfam PF07670 Nucleoside recognition 99 195 5.8E-9 T 06-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM402_RS05590 94f5c7846726f98736ba0df01a729935 433 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 422 1.0E-76 T 06-07-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM402_RS18195 9703a26bfa202bfa3b90852b89c8b6a3 184 Pfam PF00419 Fimbrial protein 51 184 1.2E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18195 9703a26bfa202bfa3b90852b89c8b6a3 184 Gene3D G3DSA:2.60.40.1090 51 184 7.9E-4 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18195 9703a26bfa202bfa3b90852b89c8b6a3 184 SUPERFAMILY SSF49401 61 184 1.49E-20 T 06-07-2017 IPR008966 Adhesion domain AM402_RS11970 a989a60820c3bc091a680c78f1925434 104 SMART SM00749 42 104 1.2E-6 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria AM402_RS11970 a989a60820c3bc091a680c78f1925434 104 Pfam PF04972 BON domain 37 104 2.1E-20 T 06-07-2017 IPR007055 BON domain AM402_RS13535 5c07981388f1470fb769500bce61ad4f 130 Gene3D G3DSA:2.60.40.1220 30 130 3.6E-28 T 06-07-2017 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like AM402_RS13535 5c07981388f1470fb769500bce61ad4f 130 SUPERFAMILY SSF81296 30 130 2.73E-25 T 06-07-2017 IPR014756 Immunoglobulin E-set AM402_RS13535 5c07981388f1470fb769500bce61ad4f 130 Pfam PF04234 CopC domain 31 129 6.7E-23 T 06-07-2017 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AM402_RS12620 975c1b47a252ec787c1334cc7666931a 566 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 562 1.7E-226 T 06-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM402_RS12620 975c1b47a252ec787c1334cc7666931a 566 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 562 33.358 T 06-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM402_RS12620 975c1b47a252ec787c1334cc7666931a 566 Pfam PF03814 Potassium-transporting ATPase A subunit 11 560 3.4E-223 T 06-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM402_RS12620 975c1b47a252ec787c1334cc7666931a 566 PIRSF PIRSF001294 1 564 5.3E-222 T 06-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM402_RS01305 411b77dbcb41bc0e12a320c9664f87b5 334 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 18 330 4.9E-167 T 06-07-2017 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM402_RS01305 411b77dbcb41bc0e12a320c9664f87b5 334 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 149 157 - T 06-07-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 AM402_RS01305 411b77dbcb41bc0e12a320c9664f87b5 334 Pfam PF13531 Bacterial extracellular solute-binding protein 43 284 8.9E-44 T 06-07-2017 AM402_RS01305 411b77dbcb41bc0e12a320c9664f87b5 334 Gene3D G3DSA:3.40.190.10 176 299 5.8E-32 T 06-07-2017 AM402_RS01305 411b77dbcb41bc0e12a320c9664f87b5 334 Gene3D G3DSA:3.40.190.10 25 166 3.5E-50 T 06-07-2017 AM402_RS01305 411b77dbcb41bc0e12a320c9664f87b5 334 SUPERFAMILY SSF53850 25 330 1.15E-87 T 06-07-2017 AM402_RS09865 8635c0974f9df4c0c4a67238d5d37a94 367 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 7.3E-46 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09865 8635c0974f9df4c0c4a67238d5d37a94 367 SUPERFAMILY SSF64518 1 367 1.31E-103 T 06-07-2017 AM402_RS09865 8635c0974f9df4c0c4a67238d5d37a94 367 Pfam PF00700 Bacterial flagellin C-terminal helical region 282 366 3.9E-31 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09865 8635c0974f9df4c0c4a67238d5d37a94 367 PRINTS PR00207 Flagellin signature 37 54 1.9E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM402_RS09865 8635c0974f9df4c0c4a67238d5d37a94 367 PRINTS PR00207 Flagellin signature 76 95 1.9E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM402_RS09865 8635c0974f9df4c0c4a67238d5d37a94 367 PRINTS PR00207 Flagellin signature 111 134 1.9E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM402_RS09865 8635c0974f9df4c0c4a67238d5d37a94 367 Gene3D G3DSA:1.20.1330.10 54 171 1.6E-61 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09865 8635c0974f9df4c0c4a67238d5d37a94 367 Gene3D G3DSA:1.20.1330.10 269 323 1.6E-61 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 Gene3D G3DSA:3.40.50.2300 3 123 2.0E-40 T 06-07-2017 AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 Gene3D G3DSA:1.10.10.10 127 227 4.1E-38 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-29 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 SUPERFAMILY SSF52172 3 127 2.99E-42 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 SUPERFAMILY SSF46894 127 226 7.65E-34 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 SMART SM00448 3 116 1.0E-41 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 SMART SM00862 150 225 5.5E-29 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.8E-113 T 06-07-2017 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AM402_RS19145 db2d155f2832b7cf8ef3fa056dbda20c 229 Pfam PF00072 Response regulator receiver domain 5 117 3.8E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS05845 6ff666906c4861b5dd79169dc55bb2a3 468 SUPERFAMILY SSF51569 27 464 9.52E-162 T 06-07-2017 AM402_RS05845 6ff666906c4861b5dd79169dc55bb2a3 468 Pfam PF01474 Class-II DAHP synthetase family 34 460 5.9E-170 T 06-07-2017 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM402_RS19300 46220da65dc5b821610559ac13f43fe5 47 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 43 0.002 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS19300 46220da65dc5b821610559ac13f43fe5 47 Pfam PF01848 Hok/gef family 5 45 8.3E-19 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS19300 46220da65dc5b821610559ac13f43fe5 47 PRINTS PR00281 Hok/Gef cell toxic protein family signature 4 22 5.1E-6 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS19300 46220da65dc5b821610559ac13f43fe5 47 PRINTS PR00281 Hok/Gef cell toxic protein family signature 24 46 5.1E-6 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS00115 9dc243033722a8123c02f21ee82a62a8 89 SMART SM01387 8 88 5.1E-51 T 06-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00115 9dc243033722a8123c02f21ee82a62a8 89 Gene3D G3DSA:1.10.287.10 3 89 1.0E-38 T 06-07-2017 IPR009068 S15/NS1, RNA-binding AM402_RS00115 9dc243033722a8123c02f21ee82a62a8 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.0E-39 T 06-07-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00115 9dc243033722a8123c02f21ee82a62a8 89 SUPERFAMILY SSF47060 3 89 2.21E-34 T 06-07-2017 IPR009068 S15/NS1, RNA-binding AM402_RS00115 9dc243033722a8123c02f21ee82a62a8 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.839 T 06-07-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00115 9dc243033722a8123c02f21ee82a62a8 89 Pfam PF00312 Ribosomal protein S15 8 88 6.1E-37 T 06-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00115 9dc243033722a8123c02f21ee82a62a8 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 06-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00115 9dc243033722a8123c02f21ee82a62a8 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 9.0E-36 T 06-07-2017 AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 446 7.0E-228 T 06-07-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 332 9.9E-42 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Gene3D G3DSA:1.10.8.60 338 446 2.6E-36 T 06-07-2017 AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 446 43.394 T 06-07-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 SMART SM01086 338 432 4.1E-23 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 338 408 2.8E-6 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Gene3D G3DSA:3.40.50.300 3 110 1.8E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Gene3D G3DSA:3.40.50.300 247 334 1.8E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 SUPERFAMILY SSF52540 3 444 2.4E-92 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Gene3D G3DSA:1.10.8.10 215 245 2.2E-32 T 06-07-2017 AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Gene3D G3DSA:1.10.8.10 111 179 2.2E-32 T 06-07-2017 AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 SMART SM00382 49 335 2.6E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS01250 601920a7f0013ae819f51d69249bcf1f 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 101 1.2E-6 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.8E-35 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.8E-41 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.8E-41 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.8E-41 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 6.8E-41 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 6.8E-41 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 06-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 Gene3D G3DSA:3.50.50.60 6 149 3.5E-67 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 Gene3D G3DSA:3.50.50.60 272 335 3.5E-67 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 SUPERFAMILY SSF55424 343 466 2.41E-39 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 Gene3D G3DSA:3.50.50.60 151 271 1.8E-35 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 SUPERFAMILY SSF51905 2 337 5.96E-58 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.6E-68 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 PIRSF PIRSF000350 1 468 7.6E-85 T 06-07-2017 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 7.5E-150 T 06-07-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 5.5E-63 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07570 ff6fd3a4a4f040362f175e7fd94940ec 475 Gene3D G3DSA:3.30.390.30 336 462 1.1E-44 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 SUPERFAMILY SSF52935 329 479 1.1E-38 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 Gene3D G3DSA:2.40.33.10 77 170 1.9E-27 T 06-07-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 SUPERFAMILY SSF51621 3 78 3.21E-88 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 SUPERFAMILY SSF51621 160 346 3.21E-88 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 06-07-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 SUPERFAMILY SSF50800 74 168 2.44E-24 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 4.2E-52 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 4.2E-52 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 4.2E-52 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.2E-52 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.2E-52 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 4.2E-52 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 4.2E-52 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 7.8E-132 T 06-07-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 Gene3D G3DSA:3.20.20.60 172 331 7.4E-95 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 Gene3D G3DSA:3.20.20.60 6 76 7.4E-95 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 1.5E-29 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.2E-170 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS13000 83e34929481ffa36893d11b10f337c79 480 Gene3D G3DSA:3.40.1380.20 332 480 5.3E-39 T 06-07-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11280 d3af122369a4edec9ed92fcedea5acd1 350 Gene3D G3DSA:3.60.60.10 11 342 7.0E-84 T 06-07-2017 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 Reactome: R-HSA-1660662 AM402_RS11280 d3af122369a4edec9ed92fcedea5acd1 350 SUPERFAMILY SSF56235 11 343 6.87E-73 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS11280 d3af122369a4edec9ed92fcedea5acd1 350 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 11 331 1.2E-42 T 06-07-2017 IPR029132 Choloylglycine hydrolase/NAAA C-terminal AM402_RS19775 29981e4b8a08f5d7629b6c22a97f8906 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 282 41.175 T 06-07-2017 IPR005337 RapZ-like family GO:0005524 AM402_RS19775 29981e4b8a08f5d7629b6c22a97f8906 284 Gene3D G3DSA:3.40.50.300 2 151 3.1E-14 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19775 29981e4b8a08f5d7629b6c22a97f8906 284 PIRSF PIRSF005052 1 284 3.7E-114 T 06-07-2017 IPR005337 RapZ-like family GO:0005524 AM402_RS19775 29981e4b8a08f5d7629b6c22a97f8906 284 Pfam PF03668 P-loop ATPase protein family 1 283 9.3E-143 T 06-07-2017 IPR005337 RapZ-like family GO:0005524 AM402_RS19775 29981e4b8a08f5d7629b6c22a97f8906 284 SUPERFAMILY SSF52540 2 152 4.37E-14 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 Pfam PF00270 DEAD/DEAH box helicase 26 195 8.0E-52 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 2 445 48.718 T 06-07-2017 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 SUPERFAMILY SSF52540 148 355 2.73E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 SMART SM00490 260 341 1.3E-29 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 Gene3D G3DSA:3.40.50.300 2 214 6.0E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 SUPERFAMILY SSF52540 2 210 2.2E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 SMART SM00487 21 224 8.9E-62 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 Pfam PF00271 Helicase conserved C-terminal domain 237 340 2.2E-24 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 Gene3D G3DSA:3.40.50.300 215 374 2.6E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15880 5459056beee842e29ebd4afa9e09a181 465 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 SMART SM00954 235 345 1.4E-63 T 06-07-2017 IPR007685 RelA/SpoT GO:0015969 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 Gene3D G3DSA:3.30.460.10 178 324 5.9E-48 T 06-07-2017 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 Pfam PF02824 TGS domain 389 448 4.1E-21 T 06-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 705 1.1E-283 T 06-07-2017 IPR004811 RelA/SpoT family GO:0015969 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 SMART SM00471 41 153 6.9E-11 T 06-07-2017 IPR003607 HD/PDEase domain AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 SUPERFAMILY SSF109604 3 191 2.83E-76 T 06-07-2017 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 Pfam PF13291 ACT domain 630 706 5.7E-16 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 SUPERFAMILY SSF55021 636 706 1.58E-5 T 06-07-2017 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 SUPERFAMILY SSF81271 376 448 5.45E-21 T 06-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 Pfam PF13328 HD domain 26 175 7.3E-53 T 06-07-2017 IPR003607 HD/PDEase domain AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 SUPERFAMILY SSF81301 180 393 7.68E-63 T 06-07-2017 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 2.1E-36 T 06-07-2017 IPR007685 RelA/SpoT GO:0015969 AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 Gene3D G3DSA:3.10.20.30 388 449 1.0E-21 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS03290 0e791913a4c5d45057134fb3d0b49000 709 Gene3D G3DSA:3.30.70.260 634 704 2.2E-6 T 06-07-2017 AM402_RS14665 8c75e22fa5cb6c1b1671d689114afdac 495 Pfam PF11863 Protein of unknown function (DUF3383) 6 494 5.2E-115 T 06-07-2017 IPR021808 Protein of unknown function DUF3383 AM402_RS17255 530adfde794cb013cbadb37b7f83b0ed 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 6.2E-182 T 06-07-2017 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM402_RS17255 530adfde794cb013cbadb37b7f83b0ed 446 Pfam PF11973 NQRA C-terminal domain 261 308 7.0E-18 T 06-07-2017 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AM402_RS17255 530adfde794cb013cbadb37b7f83b0ed 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 8.3E-116 T 06-07-2017 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM402_RS17255 530adfde794cb013cbadb37b7f83b0ed 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.004 T 06-07-2017 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SMART SM00073 675 772 2.4E-15 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Gene3D G3DSA:1.10.287.970 1 89 2.3E-38 T 06-07-2017 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SMART SM00448 525 638 3.2E-28 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SMART SM00091 155 221 2.4E-6 T 06-07-2017 IPR000014 PAS domain AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Gene3D G3DSA:3.40.50.2300 524 644 2.5E-32 T 06-07-2017 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SMART SM00388 282 347 4.7E-18 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Gene3D G3DSA:1.10.287.130 274 332 1.0E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.3E-14 T 06-07-2017 IPR000014 PAS domain AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Gene3D G3DSA:3.30.450.20 147 267 3.8E-19 T 06-07-2017 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SUPERFAMILY SSF47226 661 773 1.83E-28 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SUPERFAMILY SSF52172 525 643 2.56E-29 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SMART SM00387 394 507 8.5E-35 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Pfam PF01627 Hpt domain 686 759 8.4E-13 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 7.0E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 7.0E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 7.0E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 7.0E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Gene3D G3DSA:1.20.120.160 676 775 2.7E-34 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Pfam PF00072 Response regulator receiver domain 527 638 1.2E-21 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Pfam PF00989 PAS fold 157 266 2.0E-16 T 06-07-2017 IPR013767 PAS fold GO:0006355 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 503 1.7E-28 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SUPERFAMILY SSF55874 336 503 1.27E-40 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SUPERFAMILY SSF47384 269 347 1.82E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 5.0E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 SUPERFAMILY SSF55785 143 267 9.25E-20 T 06-07-2017 IPR000014 PAS domain AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 Gene3D G3DSA:3.30.565.10 333 503 1.1E-41 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS19620 c8a9b88b976b7adbe6e9a06fd3775cb5 778 PIRSF PIRSF003182 1 778 0.0 T 06-07-2017 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM402_RS20450 1f3885b66680578a33e6c60e7687a7e0 258 Pfam PF08220 DeoR-like helix-turn-helix domain 9 45 6.9E-8 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS20450 1f3885b66680578a33e6c60e7687a7e0 258 SMART SM00420 9 61 9.1E-4 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS20450 1f3885b66680578a33e6c60e7687a7e0 258 SMART SM01134 79 240 3.1E-36 T 06-07-2017 AM402_RS20450 1f3885b66680578a33e6c60e7687a7e0 258 SUPERFAMILY SSF100950 90 241 1.88E-13 T 06-07-2017 AM402_RS20450 1f3885b66680578a33e6c60e7687a7e0 258 Pfam PF00455 DeoR C terminal sensor domain 87 239 8.4E-31 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain AM402_RS20450 1f3885b66680578a33e6c60e7687a7e0 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 SUPERFAMILY SSF56420 2 165 7.2E-61 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 PRINTS PR01576 Peptide deformylase signature 102 120 1.6E-34 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 PRINTS PR01576 Peptide deformylase signature 121 150 1.6E-34 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 PRINTS PR01576 Peptide deformylase signature 33 62 1.6E-34 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 PRINTS PR01576 Peptide deformylase signature 90 101 1.6E-34 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 Pfam PF01327 Polypeptide deformylase 5 153 1.9E-51 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 161 2.9E-57 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 Gene3D G3DSA:3.90.45.10 6 168 6.1E-62 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 PIRSF PIRSF004749 1 171 2.9E-56 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS03490 661dbe243135c97a0655c8762d37d174 172 Hamap MF_00163 Peptide deformylase [def]. 2 163 31.206 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS12135 ed4b34a4f6b7862338914bc3e7853c08 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 35.643 T 06-07-2017 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AM402_RS12135 ed4b34a4f6b7862338914bc3e7853c08 389 Gene3D G3DSA:1.25.40.10 39 314 1.0E-22 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS12135 ed4b34a4f6b7862338914bc3e7853c08 389 Pfam PF14559 Tetratricopeptide repeat 192 245 1.6E-5 T 06-07-2017 AM402_RS12135 ed4b34a4f6b7862338914bc3e7853c08 389 SUPERFAMILY SSF48452 109 275 8.34E-14 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS01065 a3c26aa988463465c0813846af433846 344 Gene3D G3DSA:3.90.78.10 231 342 6.3E-44 T 06-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01065 a3c26aa988463465c0813846af433846 344 Gene3D G3DSA:3.30.43.10 5 69 1.1E-23 T 06-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM402_RS01065 a3c26aa988463465c0813846af433846 344 SUPERFAMILY SSF56194 205 341 4.58E-47 T 06-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01065 a3c26aa988463465c0813846af433846 344 Pfam PF01565 FAD binding domain 22 151 7.5E-23 T 06-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM402_RS01065 a3c26aa988463465c0813846af433846 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 89.252 T 06-07-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01065 a3c26aa988463465c0813846af433846 344 Gene3D G3DSA:3.30.465.10 74 230 3.6E-51 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM402_RS01065 a3c26aa988463465c0813846af433846 344 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 7 332 9.1E-108 T 06-07-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01065 a3c26aa988463465c0813846af433846 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 208 331 6.9E-36 T 06-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01065 a3c26aa988463465c0813846af433846 344 SUPERFAMILY SSF56176 7 196 8.72E-45 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Pfam PF12631 MnmE helical domain 123 451 2.1E-60 T 06-07-2017 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Gene3D G3DSA:3.30.1360.120 2 121 5.1E-43 T 06-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 SUPERFAMILY SSF116878 379 454 5.23E-52 T 06-07-2017 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 SUPERFAMILY SSF116878 121 220 5.23E-52 T 06-07-2017 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Gene3D G3DSA:1.20.120.430 122 182 5.1E-59 T 06-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Gene3D G3DSA:1.20.120.430 247 271 5.1E-59 T 06-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Gene3D G3DSA:1.20.120.430 384 454 5.1E-59 T 06-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 SUPERFAMILY SSF52540 197 372 1.12E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 SUPERFAMILY SSF52540 72 163 1.12E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Gene3D G3DSA:3.40.50.300 195 246 1.6E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 6.6E-35 T 06-07-2017 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 7.3E-103 T 06-07-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.302 T 06-07-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 367 1.9E-21 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Gene3D G3DSA:3.40.50.300 286 376 2.1E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01920 4305b451bb11572dde7db1b72645ef93 454 Pfam PF01926 50S ribosome-binding GTPase 218 313 6.6E-25 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 SUPERFAMILY SSF52540 3 201 6.12E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 Pfam PF00005 ABC transporter 319 446 3.0E-16 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 Pfam PF00005 ABC transporter 20 154 1.1E-26 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 SMART SM00382 322 490 1.2E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 SMART SM00382 29 199 1.6E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 SUPERFAMILY SSF52540 289 503 4.71E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 Gene3D G3DSA:3.40.50.300 307 514 8.4E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS12510 40a9f8ea5b85df62c81a292292f92b59 580 Gene3D G3DSA:3.40.50.300 3 234 2.5E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 SUPERFAMILY SSF50615 1 75 1.36E-24 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 Gene3D G3DSA:2.40.10.170 2 75 8.0E-30 T 06-07-2017 AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 9.0E-263 T 06-07-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 SMART SM00382 142 327 4.2E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 Gene3D G3DSA:1.10.1140.10 345 460 2.3E-57 T 06-07-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 3.9E-20 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 Gene3D G3DSA:3.40.50.300 77 343 5.7E-109 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.8E-63 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 57.032 T 06-07-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 SUPERFAMILY SSF47917 345 459 1.52E-55 T 06-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 SUPERFAMILY SSF52540 77 348 4.5E-90 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02285 0870fc921693e24dec7c8665930c9bf1 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 SUPERFAMILY SSF64518 123 547 9.55E-45 T 06-07-2017 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 545 1.3E-95 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 513 537 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 409 426 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 441 460 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 466 487 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.6E-64 T 06-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 487 545 4.1E-9 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM402_RS09740 8f398ee9e75c371c305bf8dc6f30fe20 547 Pfam PF00460 Flagella basal body rod protein 6 29 1.3E-6 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM402_RS00410 9f81f6c6ee662c564f0ebf1be9d65305 438 Pfam PF11741 AMIN domain 45 126 8.3E-7 T 06-07-2017 IPR021731 AMIN domain AM402_RS00410 9f81f6c6ee662c564f0ebf1be9d65305 438 SMART SM00646 267 425 1.3E-67 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM402_RS00410 9f81f6c6ee662c564f0ebf1be9d65305 438 Gene3D G3DSA:3.40.630.40 353 428 6.1E-58 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM402_RS00410 9f81f6c6ee662c564f0ebf1be9d65305 438 Gene3D G3DSA:3.40.630.40 205 302 6.1E-58 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM402_RS00410 9f81f6c6ee662c564f0ebf1be9d65305 438 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 207 425 4.0E-47 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM402_RS00410 9f81f6c6ee662c564f0ebf1be9d65305 438 SUPERFAMILY SSF53187 352 428 3.77E-51 T 06-07-2017 AM402_RS00410 9f81f6c6ee662c564f0ebf1be9d65305 438 SUPERFAMILY SSF53187 205 301 3.77E-51 T 06-07-2017 AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 59 67 - T 06-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 Gene3D G3DSA:3.10.20.30 3 107 3.9E-35 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 SUPERFAMILY SSF54292 5 107 3.05E-29 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 Pfam PF13183 4Fe-4S dicluster domain 147 220 9.7E-12 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 Gene3D G3DSA:1.10.1060.10 108 233 8.4E-37 T 06-07-2017 AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 12 230 6.6E-96 T 06-07-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 SUPERFAMILY SSF46548 108 232 6.1E-31 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS20090 d4e91760a7a2a6d9b9f6ffe222c1b436 245 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 112 2.7E-33 T 06-07-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20925 ece043ecc8a4e1bbfe646d3c695278b5 208 Pfam PF05309 TraE protein 2 176 1.6E-25 T 06-07-2017 IPR007973 Pilus assembly TraE GO:0000746 AM402_RS02605 9f82fd2769dc49ad5e9097c076576431 44 Pfam PF13683 Integrase core domain 4 33 1.6E-7 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 Gene3D G3DSA:3.40.228.10 352 418 2.4E-54 T 06-07-2017 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 Gene3D G3DSA:3.40.228.10 187 294 2.4E-54 T 06-07-2017 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 514 531 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 Gene3D G3DSA:3.40.50.740 419 580 1.9E-38 T 06-07-2017 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 SUPERFAMILY SSF53706 53 564 5.89E-142 T 06-07-2017 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 Gene3D G3DSA:2.40.40.20 637 776 2.6E-37 T 06-07-2017 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 Gene3D G3DSA:2.20.25.90 47 107 4.3E-6 T 06-07-2017 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 SUPERFAMILY SSF50692 655 776 1.08E-31 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 Pfam PF01568 Molydopterin dinucleotide binding domain 667 768 3.4E-20 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 Pfam PF00384 Molybdopterin oxidoreductase 106 570 1.9E-69 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS18590 5e8e15fe2fe68fcf437b1f8881b71dad 778 Gene3D G3DSA:3.40.50.740 108 186 6.1E-15 T 06-07-2017 AM402_RS09970 00ac6fd736927452b34aa12d35859ead 131 Pfam PF13995 YebF-like protein 41 127 1.4E-35 T 06-07-2017 IPR025603 YebF/Colicin-M immunity protein AM402_RS09970 00ac6fd736927452b34aa12d35859ead 131 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 41 127 5.0E-15 T 06-07-2017 IPR025603 YebF/Colicin-M immunity protein AM402_RS16335 82a58e7262aa7f5ff0c847809bddd5c1 101 SUPERFAMILY SSF47413 3 69 3.49E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS16335 82a58e7262aa7f5ff0c847809bddd5c1 101 Gene3D G3DSA:1.10.260.40 2 72 3.6E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS16335 82a58e7262aa7f5ff0c847809bddd5c1 101 SMART SM00530 11 66 6.7E-13 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS16335 82a58e7262aa7f5ff0c847809bddd5c1 101 Pfam PF01381 Helix-turn-helix 12 66 4.2E-14 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS16210 3c1d06000d7c7f3d5ccc6f781ad0f6d8 376 Pfam PF07690 Major Facilitator Superfamily 19 340 3.8E-40 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS16210 3c1d06000d7c7f3d5ccc6f781ad0f6d8 376 Gene3D G3DSA:1.20.1250.20 5 186 3.9E-29 T 06-07-2017 AM402_RS16210 3c1d06000d7c7f3d5ccc6f781ad0f6d8 376 Gene3D G3DSA:1.20.1250.20 202 371 1.1E-8 T 06-07-2017 AM402_RS16210 3c1d06000d7c7f3d5ccc6f781ad0f6d8 376 SUPERFAMILY SSF103473 3 371 6.93E-53 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS16210 3c1d06000d7c7f3d5ccc6f781ad0f6d8 376 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 342 1.2E-65 T 06-07-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 Gene3D G3DSA:3.40.50.970 4 322 9.9E-135 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 SMART SM00861 355 525 6.1E-69 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 SUPERFAMILY SSF52518 331 526 5.16E-70 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 06-07-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.5E-168 T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 Gene3D G3DSA:3.40.50.970 327 533 3.8E-83 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 SUPERFAMILY SSF52518 5 321 1.26E-119 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 SUPERFAMILY SSF52922 533 664 4.32E-42 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 3.1E-16 T 06-07-2017 IPR033248 Transketolase, C-terminal domain AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 Gene3D G3DSA:3.40.50.920 538 663 1.4E-48 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 663 0.0 T 06-07-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS18275 a49d06abb4b62278fcfedc03deaf71e3 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.9E-47 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AM402_RS07215 36cfa6105537ad0c5f1071f28f346a32 192 SMART SM00867 25 189 7.1E-68 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM402_RS07215 36cfa6105537ad0c5f1071f28f346a32 192 Pfam PF04264 YceI-like domain 26 181 1.5E-40 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM402_RS07215 36cfa6105537ad0c5f1071f28f346a32 192 Gene3D G3DSA:2.40.128.110 23 191 2.7E-59 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM402_RS07215 36cfa6105537ad0c5f1071f28f346a32 192 SUPERFAMILY SSF101874 23 191 4.32E-54 T 06-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM402_RS07180 fb0e308bb55b22f5603727c689170a2b 294 SUPERFAMILY SSF56935 19 183 4.17E-5 T 06-07-2017 AM402_RS07180 fb0e308bb55b22f5603727c689170a2b 294 Gene3D G3DSA:2.40.160.40 37 294 4.1E-28 T 06-07-2017 AM402_RS01485 a1bc7ed32d2651db43af02695423313c 131 SUPERFAMILY SSF55729 19 127 8.81E-18 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS01485 a1bc7ed32d2651db43af02695423313c 131 Gene3D G3DSA:3.40.630.30 16 125 1.1E-17 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS01485 a1bc7ed32d2651db43af02695423313c 131 Pfam PF13508 Acetyltransferase (GNAT) domain 32 118 9.0E-11 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 9.0E-25 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 SMART SM00936 285 376 3.9E-33 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 Gene3D G3DSA:2.60.410.10 285 376 1.3E-29 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 SUPERFAMILY SSF56601 15 285 1.35E-79 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 Gene3D G3DSA:3.40.710.10 30 283 6.0E-97 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 4.5E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 4.5E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 4.5E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 SUPERFAMILY SSF69189 285 378 1.29E-24 T 06-07-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS15645 6f7831c5d3333b35e0637e48cf61f390 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 265 1.6E-95 T 06-07-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 1.5E-107 T 06-07-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 SUPERFAMILY SSF55060 172 289 6.47E-30 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 Pfam PF00288 GHMP kinases N terminal domain 84 150 2.4E-12 T 06-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 PIRSF PIRSF000676 1 309 8.2E-80 T 06-07-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 06-07-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 Pfam PF08544 GHMP kinases C terminal 221 288 2.1E-7 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 29.317 T 06-07-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 Gene3D G3DSA:3.30.70.890 168 298 2.9E-38 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 SUPERFAMILY SSF54211 2 178 2.5E-31 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 Gene3D G3DSA:3.30.230.10 2 164 1.3E-48 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.5E-31 T 06-07-2017 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.5E-31 T 06-07-2017 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.5E-31 T 06-07-2017 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.5E-31 T 06-07-2017 AM402_RS19400 53d13cf870f33d3e5e9173a45483e93f 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.5E-31 T 06-07-2017 AM402_RS00015 c97e0f7268e1666f1cc57812bcdd9de0 170 SUPERFAMILY SSF49401 30 167 7.46E-22 T 06-07-2017 IPR008966 Adhesion domain AM402_RS00015 c97e0f7268e1666f1cc57812bcdd9de0 170 Gene3D G3DSA:2.60.40.1090 30 166 7.9E-19 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00015 c97e0f7268e1666f1cc57812bcdd9de0 170 Pfam PF00419 Fimbrial protein 33 166 8.0E-5 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF00975 Thioesterase domain 2860 2951 1.2E-13 T 06-07-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF53335 1067 1247 5.88E-23 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:1.10.1200.10 1742 1817 4.1E-11 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:1.10.1200.10 2768 2839 5.6E-16 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF51735 1361 1445 1.02E-5 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SMART SM00825 Beta-ketoacyl synthase 14 438 5.7E-162 T 06-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF00698 Acyl transferase domain 539 815 4.4E-42 T 06-07-2017 IPR014043 Acyl transferase AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 174 190 - T 06-07-2017 IPR018201 Beta-ketoacyl synthase, active site AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 270 387 1.6E-37 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF08415 Nonribosomal peptide synthase 2162 2222 5.5E-14 T 06-07-2017 IPR013624 Non-ribosomal peptide synthetase AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 390 501 3.1E-13 T 06-07-2017 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF52777 2028 2272 8.12E-42 T 06-07-2017 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF53901 413 433 1.71E-74 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF53901 8 128 1.71E-74 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF53901 157 383 1.71E-74 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 12 261 2.0E-66 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF53335 2508 2687 6.66E-26 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF08242 Methyltransferase domain 2530 2630 6.2E-16 T 06-07-2017 IPR013217 Methyltransferase type 12 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF08242 Methyltransferase domain 1092 1192 4.3E-16 T 06-07-2017 IPR013217 Methyltransferase type 12 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:3.40.47.10 274 438 5.2E-57 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2794 2809 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SMART SM00823 Phosphopantetheine attachment site 2771 2838 0.053 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SMART SM00823 Phosphopantetheine attachment site 1745 1799 0.018 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:3.40.50.720 1458 1670 5.3E-30 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF51735 1458 1676 1.03E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 540 831 1.5E-43 T 06-07-2017 IPR020801 Polyketide synthase, acyl transferase domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1771 1786 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF47336 1743 1856 5.5E-13 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1460 1640 1.0E-21 T 06-07-2017 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:3.40.50.1820 2840 3058 2.0E-26 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF00668 Condensation domain 1844 2137 6.5E-43 T 06-07-2017 IPR001242 Condensation domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:3.40.50.150 1049 1289 4.8E-32 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:3.40.50.150 2506 2684 2.0E-31 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF53474 2836 3050 8.59E-28 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF08659 KR domain 1462 1638 2.7E-40 T 06-07-2017 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF47336 2768 2835 4.06E-11 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:3.40.47.10 14 273 6.8E-71 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF00550 Phosphopantetheine attachment site 2773 2834 9.5E-10 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Pfam PF00550 Phosphopantetheine attachment site 1746 1810 1.0E-10 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:3.40.366.10 724 834 2.2E-55 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 Gene3D G3DSA:3.40.366.10 530 658 2.2E-55 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF52151 536 664 1.31E-52 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF52151 725 815 1.31E-52 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM402_RS04680 e1e014daf688cc802067d5914862c990 3071 SUPERFAMILY SSF52777 1840 2038 7.56E-24 T 06-07-2017 AM402_RS09035 beaff35472445ec8372fc4b9d88ccc0e 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 85 3.0E-12 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM402_RS09035 beaff35472445ec8372fc4b9d88ccc0e 95 SUPERFAMILY SSF52794 1 90 1.94E-21 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM402_RS09035 beaff35472445ec8372fc4b9d88ccc0e 95 Gene3D G3DSA:3.40.50.270 2 90 2.0E-13 T 06-07-2017 AM402_RS16230 60417be369dde50ef9ac9ef5308aebe3 384 SMART SM00327 221 380 1.8E-8 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS16230 60417be369dde50ef9ac9ef5308aebe3 384 SUPERFAMILY SSF53300 219 357 6.82E-21 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS16230 60417be369dde50ef9ac9ef5308aebe3 384 Pfam PF05762 VWA domain containing CoxE-like protein 166 379 1.6E-48 T 06-07-2017 IPR008912 Uncharacterised protein family CoxE-like AM402_RS16230 60417be369dde50ef9ac9ef5308aebe3 384 Gene3D G3DSA:3.40.50.410 220 342 1.3E-6 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS00665 067f5003c82f00167eab8c608e943873 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 189 1.6E-60 T 06-07-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 74.802 T 06-07-2017 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 SMART SM00984 324 420 2.1E-22 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 Gene3D G3DSA:3.40.50.720 3 227 1.1E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00665 067f5003c82f00167eab8c608e943873 420 PIRSF PIRSF000124 4 419 1.7E-75 T 06-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 SUPERFAMILY SSF51735 5 198 3.32E-46 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00665 067f5003c82f00167eab8c608e943873 420 Gene3D G3DSA:3.40.50.720 238 419 3.6E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00665 067f5003c82f00167eab8c608e943873 420 PIRSF PIRSF500136 1 420 1.0E-148 T 06-07-2017 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 1.0E-17 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 SUPERFAMILY SSF48179 206 297 2.04E-26 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 SUPERFAMILY SSF52413 311 419 3.01E-24 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.7E-24 T 06-07-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS00665 067f5003c82f00167eab8c608e943873 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 2.6E-119 T 06-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 1.0E-29 T 06-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 6.0E-303 T 06-07-2017 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 Gene3D G3DSA:3.40.120.10 29 225 9.2E-61 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 Gene3D G3DSA:3.40.120.10 311 443 6.4E-35 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 06-07-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 SUPERFAMILY SSF53738 210 317 4.47E-7 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 181 2.6E-37 T 06-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 Gene3D G3DSA:3.30.310.50 466 543 1.3E-26 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.6E-16 T 06-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 488 537 2.6E-5 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 SUPERFAMILY SSF53738 25 235 1.11E-51 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 Gene3D G3DSA:3.40.120.10 226 310 1.4E-44 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 SUPERFAMILY SSF55957 432 543 2.88E-17 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS16265 9f05e37c1b0b2c45b375a1cbf3164c3d 547 SUPERFAMILY SSF53738 305 446 2.24E-31 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS20055 ddaf24bab48469b742d798e2099978c5 397 Pfam PF13183 4Fe-4S dicluster domain 8 72 8.4E-10 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS20055 ddaf24bab48469b742d798e2099978c5 397 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 58 69 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS20055 ddaf24bab48469b742d798e2099978c5 397 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS20055 ddaf24bab48469b742d798e2099978c5 397 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 5 397 9.9E-221 T 06-07-2017 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 AM402_RS20055 ddaf24bab48469b742d798e2099978c5 397 SUPERFAMILY SSF46548 8 82 7.5E-15 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS20055 ddaf24bab48469b742d798e2099978c5 397 Pfam PF02754 Cysteine-rich domain 165 251 3.0E-14 T 06-07-2017 IPR004017 Cysteine-rich domain AM402_RS20055 ddaf24bab48469b742d798e2099978c5 397 Pfam PF02754 Cysteine-rich domain 295 378 1.6E-11 T 06-07-2017 IPR004017 Cysteine-rich domain AM402_RS20055 ddaf24bab48469b742d798e2099978c5 397 Gene3D G3DSA:1.10.1060.10 7 83 2.5E-14 T 06-07-2017 AM402_RS18320 0fe553981306011b6d9b71ffd5d3f885 278 SUPERFAMILY SSF51621 6 229 3.49E-49 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS18320 0fe553981306011b6d9b71ffd5d3f885 278 Gene3D G3DSA:3.20.20.60 6 229 1.4E-59 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS18320 0fe553981306011b6d9b71ffd5d3f885 278 PIRSF PIRSF015582 3 276 5.5E-76 T 06-07-2017 IPR011206 Citrate lyase beta subunit-like AM402_RS18320 0fe553981306011b6d9b71ffd5d3f885 278 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 219 1.7E-31 T 06-07-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM402_RS09430 b60a2185388d8bfe17df32396700e516 418 Gene3D G3DSA:2.30.30.60 202 251 5.1E-9 T 06-07-2017 AM402_RS09430 b60a2185388d8bfe17df32396700e516 418 SUPERFAMILY SSF50182 185 251 1.31E-11 T 06-07-2017 IPR010920 LSM domain AM402_RS09430 b60a2185388d8bfe17df32396700e516 418 Pfam PF00924 Mechanosensitive ion channel 143 397 3.6E-56 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 SUPERFAMILY SSF53067 153 340 1.71E-50 T 06-07-2017 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.3E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.3E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.3E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.3E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.3E-65 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 Gene3D G3DSA:3.90.640.10 191 263 1.5E-30 T 06-07-2017 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 Gene3D G3DSA:3.30.420.40 267 321 3.3E-35 T 06-07-2017 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 Gene3D G3DSA:3.30.420.40 164 190 3.3E-35 T 06-07-2017 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 Gene3D G3DSA:3.30.420.40 9 163 2.2E-45 T 06-07-2017 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 7.3E-170 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 Pfam PF06723 MreB/Mbl protein 11 338 2.7E-150 T 06-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AM402_RS19845 d23c1b2b22a2048a8cabeb9e7067a593 347 SUPERFAMILY SSF53067 9 152 5.49E-37 T 06-07-2017 AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 Gene3D G3DSA:3.40.50.1220 188 356 6.8E-36 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 9 550 1.1E-245 T 06-07-2017 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 1.9E-48 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 SUPERFAMILY SSF52467 186 360 3.93E-36 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 Gene3D G3DSA:3.40.50.970 368 551 6.1E-52 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 Gene3D G3DSA:3.40.50.970 9 180 4.5E-58 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 8.7E-38 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 SUPERFAMILY SSF52518 367 551 1.25E-49 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 06-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 SUPERFAMILY SSF52518 7 180 1.85E-45 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS13275 99dcafb41b23c2035462a5faa4f78276 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 3.0E-25 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM402_RS10655 95d52299a17650f44a463c6ab5148ad0 326 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 5 324 4.4E-131 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM402_RS10655 95d52299a17650f44a463c6ab5148ad0 326 PIRSF PIRSF004532 3 326 2.4E-120 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM402_RS10655 95d52299a17650f44a463c6ab5148ad0 326 Gene3D G3DSA:3.30.540.10 3 173 2.7E-57 T 06-07-2017 AM402_RS10655 95d52299a17650f44a463c6ab5148ad0 326 Gene3D G3DSA:3.30.540.10 176 324 2.5E-30 T 06-07-2017 AM402_RS10655 95d52299a17650f44a463c6ab5148ad0 326 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 6 324 2.7E-121 T 06-07-2017 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM402_RS10655 95d52299a17650f44a463c6ab5148ad0 326 SUPERFAMILY SSF56655 5 325 1.67E-94 T 06-07-2017 AM402_RS19380 361e2df020586968c74bc603660cb594 317 Pfam PF00923 Transaldolase 14 313 6.4E-102 T 06-07-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AM402_RS19380 361e2df020586968c74bc603660cb594 317 Gene3D G3DSA:3.20.20.70 2 315 3.5E-135 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS19380 361e2df020586968c74bc603660cb594 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AM402_RS19380 361e2df020586968c74bc603660cb594 317 TIGRFAM TIGR00874 talAB: transaldolase 3 316 3.6E-163 T 06-07-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AM402_RS19380 361e2df020586968c74bc603660cb594 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AM402_RS19380 361e2df020586968c74bc603660cb594 317 SUPERFAMILY SSF51569 1 316 2.51E-118 T 06-07-2017 AM402_RS19380 361e2df020586968c74bc603660cb594 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.955 T 06-07-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.0E-79 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 SUPERFAMILY SSF47240 1 154 2.99E-54 T 06-07-2017 IPR009078 Ferritin-like superfamily AM402_RS01015 373537e7a3981e8554b825b147724e28 157 PIRSF PIRSF002560 1 157 1.9E-71 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 Pfam PF00210 Ferritin-like domain 8 144 4.3E-40 T 06-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 PRINTS PR00601 Bacterioferritin signature 3 22 8.6E-75 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 PRINTS PR00601 Bacterioferritin signature 107 127 8.6E-75 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 PRINTS PR00601 Bacterioferritin signature 44 64 8.6E-75 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 PRINTS PR00601 Bacterioferritin signature 65 85 8.6E-75 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 PRINTS PR00601 Bacterioferritin signature 23 43 8.6E-75 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 PRINTS PR00601 Bacterioferritin signature 86 106 8.6E-75 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 PRINTS PR00601 Bacterioferritin signature 128 149 8.6E-75 T 06-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM402_RS01015 373537e7a3981e8554b825b147724e28 157 Gene3D G3DSA:1.20.1260.10 1 155 2.3E-65 T 06-07-2017 IPR012347 Ferritin-related AM402_RS04365 766863552f32cffcdc400e06d24f9079 257 SMART SM00893 22 215 1.7E-40 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM402_RS04365 766863552f32cffcdc400e06d24f9079 257 Hamap MF_01055 Protein FixA [fixA]. 1 257 58.332 T 06-07-2017 IPR023463 Electron transfer flavoprotein, FixA subunit GO:0009055|GO:0009437 AM402_RS04365 766863552f32cffcdc400e06d24f9079 257 SUPERFAMILY SSF52402 1 253 5.23E-59 T 06-07-2017 AM402_RS04365 766863552f32cffcdc400e06d24f9079 257 PIRSF PIRSF000090 1 257 9.9E-63 T 06-07-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 AM402_RS04365 766863552f32cffcdc400e06d24f9079 257 Pfam PF01012 Electron transfer flavoprotein domain 28 211 6.3E-38 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM402_RS04365 766863552f32cffcdc400e06d24f9079 257 Gene3D G3DSA:3.40.50.620 1 254 4.0E-66 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS19995 686f0286c266bf016cc22faf46f397bf 97 Pfam PF06611 Protein of unknown function (DUF1145) 1 57 5.3E-26 T 06-07-2017 IPR009525 Protein of unknown function DUF1145 AM402_RS19010 ac5d19e09d1e495b163ed12c75e0360c 111 SUPERFAMILY SSF82057 39 110 2.88E-29 T 06-07-2017 AM402_RS19010 ac5d19e09d1e495b163ed12c75e0360c 111 SUPERFAMILY SSF57783 1 35 1.16E-14 T 06-07-2017 AM402_RS19010 ac5d19e09d1e495b163ed12c75e0360c 111 Gene3D G3DSA:2.20.25.10 1 40 8.3E-22 T 06-07-2017 AM402_RS19010 ac5d19e09d1e495b163ed12c75e0360c 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 5.3E-16 T 06-07-2017 IPR013987 PhnA protein, N-terminal AM402_RS19010 ac5d19e09d1e495b163ed12c75e0360c 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 110 3.3E-59 T 06-07-2017 IPR004624 PhnA protein AM402_RS19010 ac5d19e09d1e495b163ed12c75e0360c 111 Gene3D G3DSA:2.30.30.40 42 110 2.4E-38 T 06-07-2017 AM402_RS19010 ac5d19e09d1e495b163ed12c75e0360c 111 Pfam PF03831 PhnA domain 44 110 2.0E-34 T 06-07-2017 IPR013988 PhnA protein, C-terminal AM402_RS18905 2a2b45ccc351ae088495c00f3409f472 316 PIRSF PIRSF000292 1 312 9.0E-136 T 06-07-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM402_RS18905 2a2b45ccc351ae088495c00f3409f472 316 Gene3D G3DSA:2.60.40.420 115 278 6.5E-43 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18905 2a2b45ccc351ae088495c00f3409f472 316 SUPERFAMILY SSF81464 18 117 3.27E-23 T 06-07-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18905 2a2b45ccc351ae088495c00f3409f472 316 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 219 5.2E-5 T 06-07-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18905 2a2b45ccc351ae088495c00f3409f472 316 Pfam PF06481 COX Aromatic Rich Motif 239 283 7.1E-18 T 06-07-2017 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AM402_RS18905 2a2b45ccc351ae088495c00f3409f472 316 Gene3D G3DSA:1.10.287.90 27 113 2.9E-35 T 06-07-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18905 2a2b45ccc351ae088495c00f3409f472 316 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 1.7E-120 T 06-07-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM402_RS18905 2a2b45ccc351ae088495c00f3409f472 316 SUPERFAMILY SSF49503 122 279 1.22E-52 T 06-07-2017 IPR008972 Cupredoxin AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 Gene3D G3DSA:3.30.230.10 288 457 6.6E-38 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 3.0E-9 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 SMART SM00382 94 247 5.3E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 SUPERFAMILY SSF52540 72 291 3.52E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 SUPERFAMILY SSF54211 258 272 5.31E-42 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 SUPERFAMILY SSF54211 306 457 5.31E-42 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 PRINTS PR01874 DNA repair protein radA signature 216 244 1.7E-93 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 PRINTS PR01874 DNA repair protein radA signature 325 348 1.7E-93 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 PRINTS PR01874 DNA repair protein radA signature 127 144 1.7E-93 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 PRINTS PR01874 DNA repair protein radA signature 177 201 1.7E-93 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 PRINTS PR01874 DNA repair protein radA signature 11 35 1.7E-93 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 PRINTS PR01874 DNA repair protein radA signature 86 114 1.7E-93 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 PRINTS PR01874 DNA repair protein radA signature 251 277 1.7E-93 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 42.74 T 06-07-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 Pfam PF13481 AAA domain 88 225 3.5E-13 T 06-07-2017 AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 Gene3D G3DSA:3.40.50.300 62 280 6.3E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05140 aef11bb6863b55dce53a85490b8adf1e 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 2.8E-231 T 06-07-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.983 T 06-07-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 SMART SM00729 43 255 1.4E-38 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 Pfam PF04055 Radical SAM superfamily 50 203 3.3E-16 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 6.1E-20 T 06-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 PIRSF PIRSF001619 1 318 1.1E-139 T 06-07-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 2.2E-125 T 06-07-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 Gene3D G3DSA:3.20.20.70 6 313 2.8E-104 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 SMART SM00876 220 312 3.5E-47 T 06-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM402_RS15965 ec6ba9cc93c7f38c119198f5a85fe849 345 SUPERFAMILY SSF102114 6 312 7.98E-94 T 06-07-2017 AM402_RS12145 dd52cc22d577afe1fb5f2259e5c94d14 107 Gene3D G3DSA:3.30.780.10 28 107 1.1E-34 T 06-07-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 AM402_RS12145 dd52cc22d577afe1fb5f2259e5c94d14 107 SUPERFAMILY SSF55159 4 103 3.66E-26 T 06-07-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 AM402_RS12145 dd52cc22d577afe1fb5f2259e5c94d14 107 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 7 107 4.4E-39 T 06-07-2017 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM402_RS12145 dd52cc22d577afe1fb5f2259e5c94d14 107 Pfam PF01253 Translation initiation factor SUI1 31 100 2.7E-19 T 06-07-2017 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 AM402_RS12145 dd52cc22d577afe1fb5f2259e5c94d14 107 PIRSF PIRSF037511 1 107 2.8E-34 T 06-07-2017 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 398 3.7E-19 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 SUPERFAMILY SSF111369 62 143 4.71E-5 T 06-07-2017 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 20 441 4.5E-107 T 06-07-2017 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 373 1.2E-9 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 1.2E-64 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 1.2E-64 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 72 92 1.2E-64 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 30 53 1.2E-64 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 326 1.2E-64 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 362 1.2E-64 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 385 1.2E-64 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 Gene3D G3DSA:2.40.50.100 284 322 2.7E-17 T 06-07-2017 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 Gene3D G3DSA:2.40.50.100 58 92 2.7E-17 T 06-07-2017 AM402_RS18095 5d363570be8308fd6dacb7a5915a558d 441 ProSitePatterns PS00543 HlyD family secretion proteins signature. 405 427 - T 06-07-2017 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AM402_RS11135 5e0123699b3c6f33f2ab4a0474e8ffeb 286 Pfam PF04954 Siderophore-interacting protein 149 265 3.9E-29 T 06-07-2017 IPR007037 Siderophore-interacting protein AM402_RS11135 5e0123699b3c6f33f2ab4a0474e8ffeb 286 Gene3D G3DSA:3.40.50.80 147 282 1.5E-37 T 06-07-2017 AM402_RS11135 5e0123699b3c6f33f2ab4a0474e8ffeb 286 Gene3D G3DSA:2.40.30.10 19 141 7.6E-29 T 06-07-2017 AM402_RS11135 5e0123699b3c6f33f2ab4a0474e8ffeb 286 Pfam PF08021 Siderophore-interacting FAD-binding domain 27 142 7.4E-34 T 06-07-2017 IPR013113 FAD-binding 9, siderophore-interacting AM402_RS11135 5e0123699b3c6f33f2ab4a0474e8ffeb 286 SUPERFAMILY SSF63380 9 143 5.61E-13 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 SUPERFAMILY SSF81624 2 138 1.28E-42 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 Gene3D G3DSA:3.20.190.10 2 129 1.3E-36 T 06-07-2017 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 SMART SM00898 2 115 1.2E-50 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 Gene3D G3DSA:1.10.8.50 130 269 4.7E-50 T 06-07-2017 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.861 T 06-07-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.4E-29 T 06-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 3.0E-11 T 06-07-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 114 9.0E-31 T 06-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 06-07-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 SUPERFAMILY SSF46946 130 222 3.01E-30 T 06-07-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 SUPERFAMILY SSF57716 217 268 8.27E-17 T 06-07-2017 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 SMART SM01232 129 221 1.1E-45 T 06-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM402_RS01755 f2c78c8a7f906bd0a4b081c8d69acc03 274 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 3.6E-103 T 06-07-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM402_RS18795 ec65ad762e79f40fa82551611e675977 67 Gene3D G3DSA:1.20.1280.40 1 67 2.5E-38 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA AM402_RS18795 ec65ad762e79f40fa82551611e675977 67 SUPERFAMILY SSF68989 1 67 1.7E-31 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA AM402_RS18795 ec65ad762e79f40fa82551611e675977 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 1.6E-33 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 Pfam PF00294 pfkB family carbohydrate kinase 4 296 1.6E-72 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 6.3E-111 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.083 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 PRINTS PR00990 Ribokinase signature 8 29 1.3E-35 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 PRINTS PR00990 Ribokinase signature 35 54 1.3E-35 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 PRINTS PR00990 Ribokinase signature 219 230 1.3E-35 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 PRINTS PR00990 Ribokinase signature 175 190 1.3E-35 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 PRINTS PR00990 Ribokinase signature 107 120 1.3E-35 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 Gene3D G3DSA:3.40.1190.20 4 306 3.0E-96 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 SUPERFAMILY SSF53613 4 304 1.12E-84 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS02360 dfe92a900ae4f68944484bba338cfa59 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 Pfam PF13091 PLD-like domain 326 445 5.3E-24 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 Pfam PF13091 PLD-like domain 135 248 5.6E-13 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 SUPERFAMILY SSF56024 66 315 3.14E-46 T 06-07-2017 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 49.67 T 06-07-2017 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 Gene3D G3DSA:3.30.870.10 318 463 2.4E-35 T 06-07-2017 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 SMART SM00155 399 426 1.9E-5 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 SMART SM00155 219 246 5.2E-4 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 5.6E-8 T 06-07-2017 IPR027379 Cardiolipin synthase N-terminal AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 Gene3D G3DSA:3.30.870.10 113 317 2.0E-34 T 06-07-2017 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 2.1E-187 T 06-07-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AM402_RS11930 d3c4d7e42c2803dcae56f8e1ff336256 486 SUPERFAMILY SSF56024 273 472 1.1E-48 T 06-07-2017 AM402_RS00285 df2e9906e928d88373018593a90075f1 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 7.6E-68 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM402_RS00285 df2e9906e928d88373018593a90075f1 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 3.3E-67 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM402_RS00285 df2e9906e928d88373018593a90075f1 212 SUPERFAMILY SSF55068 9 208 2.49E-82 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM402_RS00285 df2e9906e928d88373018593a90075f1 212 Gene3D G3DSA:3.30.1060.10 10 199 4.1E-78 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM402_RS00285 df2e9906e928d88373018593a90075f1 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 39.137 T 06-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM402_RS10045 6b42dc67004ac2aae82a0e9473763c59 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 226 7.8E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS10045 6b42dc67004ac2aae82a0e9473763c59 235 Pfam PF00072 Response regulator receiver domain 10 118 5.8E-29 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS10045 6b42dc67004ac2aae82a0e9473763c59 235 Gene3D G3DSA:3.40.50.2300 6 151 4.4E-40 T 06-07-2017 AM402_RS10045 6b42dc67004ac2aae82a0e9473763c59 235 SMART SM00448 8 118 2.2E-41 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS10045 6b42dc67004ac2aae82a0e9473763c59 235 Gene3D G3DSA:1.10.10.10 152 229 5.8E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS10045 6b42dc67004ac2aae82a0e9473763c59 235 SMART SM00862 151 227 1.7E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS10045 6b42dc67004ac2aae82a0e9473763c59 235 SUPERFAMILY SSF52172 7 186 1.2E-41 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Gene3D G3DSA:1.10.8.60 778 856 2.1E-29 T 06-07-2017 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 SUPERFAMILY SSF52540 546 853 8.42E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 3.4E-25 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Gene3D G3DSA:1.10.1780.10 1 147 2.8E-45 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 1.1E-13 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.1E-55 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 06-07-2017 IPR028299 ClpA/B, conserved site 2 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 SMART SM01086 766 855 5.7E-34 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Gene3D G3DSA:3.40.50.300 552 777 4.8E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 06-07-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 SUPERFAMILY SSF81923 4 156 1.28E-41 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Gene3D G3DSA:3.40.50.300 160 342 1.1E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 06-07-2017 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Gene3D G3DSA:1.10.8.60 343 428 3.4E-37 T 06-07-2017 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 SMART SM00382 198 344 3.0E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 SMART SM00382 597 752 3.0E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 SUPERFAMILY SSF52540 159 545 2.52E-101 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 6.1E-11 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS17020 f6589e0883e42232bea8bc1d928346aa 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.4E-11 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 SUPERFAMILY SSF46785 3 85 9.92E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 Gene3D G3DSA:1.10.10.10 2 86 4.7E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 8.7E-21 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 Gene3D G3DSA:3.40.190.10 94 179 8.1E-35 T 06-07-2017 AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 Pfam PF03466 LysR substrate binding domain 91 293 7.1E-41 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.0E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.0E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.0E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 Gene3D G3DSA:3.40.190.10 180 260 1.4E-16 T 06-07-2017 AM402_RS06165 96bf854fb6ec5cf054febe4d60c97057 306 SUPERFAMILY SSF53850 93 297 7.6E-41 T 06-07-2017 AM402_RS13965 3248114e81dd3cc394af36d9ab66d521 375 SUPERFAMILY SSF56349 82 372 4.41E-48 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS13965 3248114e81dd3cc394af36d9ab66d521 375 Gene3D G3DSA:3.30.160.60 1 67 3.1E-23 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AM402_RS13965 3248114e81dd3cc394af36d9ab66d521 375 Gene3D G3DSA:1.10.443.10 192 373 7.3E-39 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS13965 3248114e81dd3cc394af36d9ab66d521 375 Gene3D G3DSA:1.10.150.130 82 189 4.3E-30 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS13965 3248114e81dd3cc394af36d9ab66d521 375 SUPERFAMILY SSF54171 15 60 2.09E-5 T 06-07-2017 IPR016177 DNA-binding domain GO:0003677 AM402_RS13965 3248114e81dd3cc394af36d9ab66d521 375 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 1 72 3.2E-31 T 06-07-2017 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 AM402_RS13965 3248114e81dd3cc394af36d9ab66d521 375 Pfam PF00589 Phage integrase family 193 364 4.0E-18 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS14235 3248114e81dd3cc394af36d9ab66d521 375 SUPERFAMILY SSF56349 82 372 4.41E-48 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS14235 3248114e81dd3cc394af36d9ab66d521 375 Gene3D G3DSA:3.30.160.60 1 67 3.1E-23 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AM402_RS14235 3248114e81dd3cc394af36d9ab66d521 375 Gene3D G3DSA:1.10.443.10 192 373 7.3E-39 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS14235 3248114e81dd3cc394af36d9ab66d521 375 Gene3D G3DSA:1.10.150.130 82 189 4.3E-30 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS14235 3248114e81dd3cc394af36d9ab66d521 375 SUPERFAMILY SSF54171 15 60 2.09E-5 T 06-07-2017 IPR016177 DNA-binding domain GO:0003677 AM402_RS14235 3248114e81dd3cc394af36d9ab66d521 375 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 1 72 3.2E-31 T 06-07-2017 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 AM402_RS14235 3248114e81dd3cc394af36d9ab66d521 375 Pfam PF00589 Phage integrase family 193 364 4.0E-18 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 06-07-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 Gene3D G3DSA:3.20.19.10 162 361 3.9E-97 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM402_RS07585 d6f45169f099f9586163c21209354f42 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 9.7E-66 T 06-07-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.4E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 SUPERFAMILY SSF52016 162 370 6.67E-73 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM402_RS07585 d6f45169f099f9586163c21209354f42 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.8E-97 T 06-07-2017 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 Gene3D G3DSA:3.30.499.10 402 519 5.6E-64 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 PIRSF PIRSF036687 1 859 0.0 T 06-07-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 SUPERFAMILY SSF74778 2 160 2.48E-68 T 06-07-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 Gene3D G3DSA:3.40.1060.10 520 682 1.2E-87 T 06-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 Gene3D G3DSA:3.30.499.10 684 860 8.1E-55 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07585 d6f45169f099f9586163c21209354f42 865 SUPERFAMILY SSF53732 380 860 9.94E-152 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS19655 3aca6cd296625afd7e300d5db5e4b525 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 3.2E-17 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM402_RS19655 3aca6cd296625afd7e300d5db5e4b525 213 Gene3D G3DSA:3.40.30.10 7 101 3.7E-28 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS19655 3aca6cd296625afd7e300d5db5e4b525 213 SUPERFAMILY SSF47616 82 208 1.85E-27 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AM402_RS19655 3aca6cd296625afd7e300d5db5e4b525 213 SUPERFAMILY SSF52833 11 110 1.26E-21 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS19655 3aca6cd296625afd7e300d5db5e4b525 213 Gene3D G3DSA:1.20.1050.10 102 209 1.2E-16 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AM402_RS19655 3aca6cd296625afd7e300d5db5e4b525 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 8.2E-11 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal AM402_RS17590 c70d1773881ed1784769b7802821671b 301 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 24 286 6.8E-102 T 06-07-2017 IPR021844 Integrating conjugative element protein, PFL4704 AM402_RS17590 c70d1773881ed1784769b7802821671b 301 Pfam PF11920 Protein of unknown function (DUF3438) 19 291 1.5E-113 T 06-07-2017 IPR021844 Integrating conjugative element protein, PFL4704 AM402_RS20075 116c3b875a0710607f14ea26fea78468 359 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 35 348 5.8E-69 T 06-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM402_RS20075 116c3b875a0710607f14ea26fea78468 359 SUPERFAMILY SSF51695 31 354 5.49E-94 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM402_RS20075 116c3b875a0710607f14ea26fea78468 359 Gene3D G3DSA:3.20.20.190 31 355 9.4E-94 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM402_RS19805 8d4a012af4d5a3499c3a1fb13dc157be 168 Pfam PF00545 ribonuclease 77 164 4.1E-22 T 06-07-2017 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 AM402_RS19805 8d4a012af4d5a3499c3a1fb13dc157be 168 SUPERFAMILY SSF53933 62 166 3.68E-34 T 06-07-2017 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 AM402_RS19805 8d4a012af4d5a3499c3a1fb13dc157be 168 Gene3D G3DSA:3.10.450.30 60 166 4.4E-42 T 06-07-2017 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 AM402_RS19805 8d4a012af4d5a3499c3a1fb13dc157be 168 PRINTS PR00117 Barnase signature 147 165 1.5E-30 T 06-07-2017 IPR001887 Barnase GO:0003723|GO:0004521 AM402_RS19805 8d4a012af4d5a3499c3a1fb13dc157be 168 PRINTS PR00117 Barnase signature 64 81 1.5E-30 T 06-07-2017 IPR001887 Barnase GO:0003723|GO:0004521 AM402_RS19805 8d4a012af4d5a3499c3a1fb13dc157be 168 PRINTS PR00117 Barnase signature 104 122 1.5E-30 T 06-07-2017 IPR001887 Barnase GO:0003723|GO:0004521 AM402_RS19805 8d4a012af4d5a3499c3a1fb13dc157be 168 PRINTS PR00117 Barnase signature 84 101 1.5E-30 T 06-07-2017 IPR001887 Barnase GO:0003723|GO:0004521 AM402_RS19805 8d4a012af4d5a3499c3a1fb13dc157be 168 PRINTS PR00117 Barnase signature 125 144 1.5E-30 T 06-07-2017 IPR001887 Barnase GO:0003723|GO:0004521 AM402_RS00470 c0f2b60c1fa77c8a362a0c3e847b56c4 287 Pfam PF03466 LysR substrate binding domain 115 280 3.6E-8 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS00470 c0f2b60c1fa77c8a362a0c3e847b56c4 287 SUPERFAMILY SSF46785 7 85 6.1E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00470 c0f2b60c1fa77c8a362a0c3e847b56c4 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 8.7E-14 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS00470 c0f2b60c1fa77c8a362a0c3e847b56c4 287 SUPERFAMILY SSF53850 102 281 1.57E-12 T 06-07-2017 AM402_RS00470 c0f2b60c1fa77c8a362a0c3e847b56c4 287 Gene3D G3DSA:1.10.10.10 7 90 2.8E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 3.5E-50 T 06-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 4.3E-192 T 06-07-2017 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 Gene3D G3DSA:3.40.47.10 4 126 2.0E-62 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 Gene3D G3DSA:3.40.47.10 184 266 2.0E-62 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 SUPERFAMILY SSF53901 262 386 4.15E-43 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 06-07-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 06-07-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 SUPERFAMILY SSF53901 1 259 4.94E-79 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 Gene3D G3DSA:3.40.47.10 268 386 9.1E-62 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 Gene3D G3DSA:3.40.47.10 141 183 9.1E-62 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 3.6E-142 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 8.5E-79 T 06-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 06-07-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM402_RS20275 1df54fe52ed5a944fe82a202ead964a9 387 PIRSF PIRSF000429 1 387 1.0E-131 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AM402_RS20430 a2a9a8e4c8db38d7828789c28bc3e4e4 454 Gene3D G3DSA:3.30.1360.60 9 87 1.8E-22 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS20430 a2a9a8e4c8db38d7828789c28bc3e4e4 454 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 24 41 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS20430 a2a9a8e4c8db38d7828789c28bc3e4e4 454 SUPERFAMILY SSF55604 11 85 2.09E-18 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS20430 a2a9a8e4c8db38d7828789c28bc3e4e4 454 Pfam PF02378 Phosphotransferase system, EIIC 118 392 2.4E-27 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM402_RS20430 a2a9a8e4c8db38d7828789c28bc3e4e4 454 Pfam PF00367 phosphotransferase system, EIIB 15 46 1.9E-10 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS20580 25427b7fb3df7a7257477365cf37c053 712 Pfam PF03477 ATP cone domain 4 89 6.7E-21 T 06-07-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM402_RS20580 25427b7fb3df7a7257477365cf37c053 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 116 705 1.1E-204 T 06-07-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AM402_RS20580 25427b7fb3df7a7257477365cf37c053 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 2.8E-184 T 06-07-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AM402_RS20580 25427b7fb3df7a7257477365cf37c053 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM402_RS20580 25427b7fb3df7a7257477365cf37c053 712 SUPERFAMILY SSF51998 121 687 4.88E-197 T 06-07-2017 AM402_RS20580 25427b7fb3df7a7257477365cf37c053 712 Gene3D G3DSA:3.20.70.20 124 685 7.4E-187 T 06-07-2017 AM402_RS07520 90b76267477f5c62bdb2f5d09fc1bd80 71 SUPERFAMILY SSF57716 3 61 7.84E-21 T 06-07-2017 AM402_RS07520 90b76267477f5c62bdb2f5d09fc1bd80 71 Pfam PF03884 Domain of unknown function (DUF329) 7 57 1.1E-24 T 06-07-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM402_RS07520 90b76267477f5c62bdb2f5d09fc1bd80 71 Gene3D G3DSA:3.30.50.10 2 61 1.0E-25 T 06-07-2017 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AM402_RS07520 90b76267477f5c62bdb2f5d09fc1bd80 71 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 58 18.385 T 06-07-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM402_RS01830 a361f92a223630b58208c72e95a792a2 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 4.1E-42 T 06-07-2017 IPR013527 YicC-like, N-terminal AM402_RS01830 a361f92a223630b58208c72e95a792a2 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 7.1E-124 T 06-07-2017 IPR005229 Conserved hypothetical protein CHP00255 AM402_RS01830 a361f92a223630b58208c72e95a792a2 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.4E-34 T 06-07-2017 IPR013551 Domain of unknown function DUF1732 AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 PIRSF PIRSF000456 4 267 3.5E-106 T 06-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 Gene3D G3DSA:1.20.1180.10 197 267 2.0E-23 T 06-07-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 265 1.3E-106 T 06-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 266 2.5E-28 T 06-07-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 267 48.64 T 06-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 SUPERFAMILY SSF51161 1 258 6.9E-80 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 Gene3D G3DSA:2.160.10.10 3 194 3.5E-50 T 06-07-2017 AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.5E-8 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 178 0.0024 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 1.8E-9 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS06305 b6859c4c248b731609b22b47de94e78f 267 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 PIRSF PIRSF000398 1 271 6.1E-66 T 06-07-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 253 3.3E-72 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 269 1.7E-95 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 Gene3D G3DSA:3.40.50.150 1 59 3.7E-49 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 Gene3D G3DSA:3.40.50.150 160 269 3.7E-49 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 Gene3D G3DSA:1.10.1020.10 60 156 1.6E-35 T 06-07-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 SUPERFAMILY SSF53335 5 269 5.65E-70 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.2E-18 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.2E-18 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.2E-18 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS02470 57160c024d69b6f07e27ba8d9fcdb16b 271 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.2E-18 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS09525 b81f75b38ade227e4e84b25ed3759de0 246 Gene3D G3DSA:3.30.70.20 42 107 2.5E-14 T 06-07-2017 AM402_RS09525 b81f75b38ade227e4e84b25ed3759de0 246 SUPERFAMILY SSF54862 42 222 5.55E-67 T 06-07-2017 AM402_RS09525 b81f75b38ade227e4e84b25ed3759de0 246 Pfam PF13247 4Fe-4S dicluster domain 94 187 1.9E-29 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS09525 b81f75b38ade227e4e84b25ed3759de0 246 Gene3D G3DSA:3.30.70.20 108 150 1.1E-24 T 06-07-2017 AM402_RS09525 b81f75b38ade227e4e84b25ed3759de0 246 Gene3D G3DSA:3.30.70.20 151 230 9.1E-28 T 06-07-2017 AM402_RS09525 b81f75b38ade227e4e84b25ed3759de0 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS01255 270c0b3f522b1f883ca242959421f2ee 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 1.9E-119 T 06-07-2017 AM402_RS01255 270c0b3f522b1f883ca242959421f2ee 305 Pfam PF01040 UbiA prenyltransferase family 28 267 4.8E-36 T 06-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AM402_RS01255 270c0b3f522b1f883ca242959421f2ee 305 PIRSF PIRSF005355 1 305 8.0E-90 T 06-07-2017 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AM402_RS01255 270c0b3f522b1f883ca242959421f2ee 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.382 T 06-07-2017 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 Pfam PF08220 DeoR-like helix-turn-helix domain 5 55 9.2E-16 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 SMART SM00420 5 57 1.9E-16 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 Pfam PF00294 pfkB family carbohydrate kinase 92 382 7.3E-65 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 Hamap MF_01987 Ribokinase [rbsK]. 92 392 21.577 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 2.5E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 2.5E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 Gene3D G3DSA:3.40.1190.20 93 395 8.0E-78 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 PRINTS PR00990 Ribokinase signature 123 142 3.5E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 PRINTS PR00990 Ribokinase signature 96 117 3.5E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 PRINTS PR00990 Ribokinase signature 196 209 3.5E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 PRINTS PR00990 Ribokinase signature 264 279 3.5E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 PRINTS PR00990 Ribokinase signature 308 319 3.5E-28 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 Gene3D G3DSA:1.10.10.10 4 67 5.0E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 337 350 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 SUPERFAMILY SSF53613 94 381 5.3E-72 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS10635 f2ecd225317629ebed11e8aee1259406 406 SUPERFAMILY SSF46785 3 56 3.95E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16560 cd5d7476d8bdbac6911e0e55f8618469 255 Pfam PF13730 Helix-turn-helix domain 16 66 4.2E-13 T 06-07-2017 AM402_RS16560 cd5d7476d8bdbac6911e0e55f8618469 255 Gene3D G3DSA:1.10.10.10 17 76 8.7E-6 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16560 cd5d7476d8bdbac6911e0e55f8618469 255 SUPERFAMILY SSF46785 18 77 3.4E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS04230 827f3560906878f6a942872d11d03af3 649 SUPERFAMILY SSF56935 40 649 4.03E-82 T 06-07-2017 AM402_RS04230 827f3560906878f6a942872d11d03af3 649 Gene3D G3DSA:2.40.170.20 151 649 1.2E-61 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS04230 827f3560906878f6a942872d11d03af3 649 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 141 1.8E-18 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS04230 827f3560906878f6a942872d11d03af3 649 Pfam PF00593 TonB dependent receptor 417 648 7.4E-22 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS04230 827f3560906878f6a942872d11d03af3 649 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 632 649 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site AM402_RS04230 827f3560906878f6a942872d11d03af3 649 Gene3D G3DSA:2.170.130.10 41 150 2.6E-25 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS13265 6498d493b62286e29e824fe6d7b91a55 87 SUPERFAMILY SSF47413 16 83 8.57E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS13265 6498d493b62286e29e824fe6d7b91a55 87 SMART SM00530 22 77 1.5E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS13265 6498d493b62286e29e824fe6d7b91a55 87 Gene3D G3DSA:1.10.260.40 23 82 1.2E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS13265 6498d493b62286e29e824fe6d7b91a55 87 Pfam PF01381 Helix-turn-helix 23 77 3.7E-13 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS00715 1b0135808d8a18a023ace7c2ab0493c2 89 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 2 89 5.7E-34 T 06-07-2017 IPR004386 Toxin-antitoxin system, YafQ-like toxin AM402_RS00715 1b0135808d8a18a023ace7c2ab0493c2 89 TIGRFAM TIGR00053 TIGR00053: addiction module toxin component, YafQ family 1 89 2.9E-28 T 06-07-2017 IPR004386 Toxin-antitoxin system, YafQ-like toxin AM402_RS00715 1b0135808d8a18a023ace7c2ab0493c2 89 PIRSF PIRSF006156 1 89 4.4E-29 T 06-07-2017 IPR004386 Toxin-antitoxin system, YafQ-like toxin AM402_RS00715 1b0135808d8a18a023ace7c2ab0493c2 89 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 88 4.4E-28 T 06-07-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM402_RS00715 1b0135808d8a18a023ace7c2ab0493c2 89 SUPERFAMILY SSF143011 1 88 2.75E-27 T 06-07-2017 AM402_RS19830 195a75a3bc69ee4aba4b6af8a9cf73e4 195 Gene3D G3DSA:3.90.950.10 3 185 2.9E-68 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AM402_RS19830 195a75a3bc69ee4aba4b6af8a9cf73e4 195 SUPERFAMILY SSF52972 3 184 5.36E-60 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AM402_RS19830 195a75a3bc69ee4aba4b6af8a9cf73e4 195 PIRSF PIRSF006305 2 191 4.9E-53 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 AM402_RS19830 195a75a3bc69ee4aba4b6af8a9cf73e4 195 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.22 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 AM402_RS19830 195a75a3bc69ee4aba4b6af8a9cf73e4 195 Pfam PF02545 Maf-like protein 4 184 1.6E-57 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 AM402_RS19830 195a75a3bc69ee4aba4b6af8a9cf73e4 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 179 1.2E-61 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 AM402_RS11850 057b3cf1c04420bbabebe3a8fc75bf03 85 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 21 73 9.5E-10 T 06-07-2017 IPR014321 Phage shock protein, PspD AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 127 140 8.3E-43 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 4 21 8.3E-43 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 100 121 8.3E-43 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 21 42 8.3E-43 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 PRINTS PR01404 DATP pyrophosphohydrolase signature 72 91 8.3E-43 T 06-07-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 PRINTS PR00502 NUDIX hydrolase family signature 34 48 5.8E-5 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 PRINTS PR00502 NUDIX hydrolase family signature 48 63 5.8E-5 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 SUPERFAMILY SSF55811 2 143 5.82E-25 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 Gene3D G3DSA:3.90.79.10 2 144 5.0E-30 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM402_RS13050 017ae062dbcbbaf72c7b54b466a47562 145 Pfam PF00293 NUDIX domain 6 140 2.9E-19 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS09985 8bf3ba4846efff0f53d0f5d661cefde9 294 SMART SM00644 37 181 6.0E-16 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AM402_RS09985 8bf3ba4846efff0f53d0f5d661cefde9 294 Gene3D G3DSA:3.40.80.10 39 200 4.6E-54 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AM402_RS09985 8bf3ba4846efff0f53d0f5d661cefde9 294 Pfam PF01471 Putative peptidoglycan binding domain 217 265 1.2E-6 T 06-07-2017 IPR002477 Peptidoglycan binding-like AM402_RS09985 8bf3ba4846efff0f53d0f5d661cefde9 294 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 44 182 9.2E-20 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AM402_RS09985 8bf3ba4846efff0f53d0f5d661cefde9 294 Gene3D G3DSA:1.10.101.10 217 254 8.6E-5 T 06-07-2017 IPR002477 Peptidoglycan binding-like AM402_RS09985 8bf3ba4846efff0f53d0f5d661cefde9 294 SUPERFAMILY SSF55846 31 197 1.83E-49 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AM402_RS09985 8bf3ba4846efff0f53d0f5d661cefde9 294 SUPERFAMILY SSF47090 200 278 8.24E-22 T 06-07-2017 IPR002477 Peptidoglycan binding-like AM402_RS13545 ab9f619add267a4c415e3996f370478e 144 Pfam PF00582 Universal stress protein family 1 144 1.8E-19 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS13545 ab9f619add267a4c415e3996f370478e 144 Gene3D G3DSA:3.40.50.620 3 144 9.4E-27 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS13545 ab9f619add267a4c415e3996f370478e 144 SUPERFAMILY SSF52402 3 144 3.1E-22 T 06-07-2017 AM402_RS13545 ab9f619add267a4c415e3996f370478e 144 PRINTS PR01438 Universal stress protein signature 105 117 1.9E-11 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS13545 ab9f619add267a4c415e3996f370478e 144 PRINTS PR01438 Universal stress protein signature 2 20 1.9E-11 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS13545 ab9f619add267a4c415e3996f370478e 144 PRINTS PR01438 Universal stress protein signature 122 144 1.9E-11 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS18300 d88fbee5460ab74a8f37d0bf9c9dafcf 338 Gene3D G3DSA:3.40.50.1100 40 146 1.0E-31 T 06-07-2017 AM402_RS18300 d88fbee5460ab74a8f37d0bf9c9dafcf 338 Gene3D G3DSA:3.40.50.1100 152 313 2.5E-41 T 06-07-2017 AM402_RS18300 d88fbee5460ab74a8f37d0bf9c9dafcf 338 Gene3D G3DSA:3.40.50.1100 1 39 2.5E-41 T 06-07-2017 AM402_RS18300 d88fbee5460ab74a8f37d0bf9c9dafcf 338 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 06-07-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM402_RS18300 d88fbee5460ab74a8f37d0bf9c9dafcf 338 SUPERFAMILY SSF53686 3 313 2.75E-74 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS18300 d88fbee5460ab74a8f37d0bf9c9dafcf 338 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 282 2.7E-60 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS14560 12ecb2f4364345594fb5403e811f5446 234 Pfam PF00849 RNA pseudouridylate synthase 62 192 1.4E-16 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS14560 12ecb2f4364345594fb5403e811f5446 234 Pfam PF01479 S4 domain 1 47 1.0E-7 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS14560 12ecb2f4364345594fb5403e811f5446 234 Gene3D G3DSA:3.10.290.10 1 64 2.5E-19 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS14560 12ecb2f4364345594fb5403e811f5446 234 SUPERFAMILY SSF55174 1 55 8.98E-12 T 06-07-2017 AM402_RS14560 12ecb2f4364345594fb5403e811f5446 234 SUPERFAMILY SSF55120 61 227 7.2E-47 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS14560 12ecb2f4364345594fb5403e811f5446 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 06-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM402_RS14560 12ecb2f4364345594fb5403e811f5446 234 SMART SM00363 1 69 2.1E-7 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS14560 12ecb2f4364345594fb5403e811f5446 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 5.7E-57 T 06-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 488 494 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 SUPERFAMILY SSF55008 97 161 1.83E-14 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00941 Cadmium-transporting ATPase signature 101 110 1.6E-6 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00941 Cadmium-transporting ATPase signature 290 306 1.6E-6 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00941 Cadmium-transporting ATPase signature 112 133 1.6E-6 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00941 Cadmium-transporting ATPase signature 270 290 1.6E-6 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 235 785 1.9E-178 T 06-07-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 621 9.3E-28 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 9.3E-28 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 642 9.3E-28 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 486 500 9.3E-28 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 718 9.3E-28 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 683 702 9.3E-28 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 Pfam PF00403 Heavy-metal-associated domain 102 159 1.2E-11 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 ProSitePatterns PS01047 Heavy-metal-associated domain. 103 132 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 ProSitePatterns PS01229 Hypothetical cof family signature 2. 683 705 - T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 Pfam PF00702 haloacid dehalogenase-like hydrolase 482 696 1.5E-37 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 Gene3D G3DSA:2.70.150.10 238 386 2.9E-28 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 SUPERFAMILY SSF56784 601 782 8.25E-52 T 06-07-2017 IPR023214 HAD-like domain AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 SUPERFAMILY SSF56784 484 570 8.25E-52 T 06-07-2017 IPR023214 HAD-like domain AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 Pfam PF00122 E1-E2 ATPase 256 477 4.8E-61 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 SUPERFAMILY SSF81665 386 480 3.14E-17 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 SUPERFAMILY SSF81665 732 781 3.14E-17 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 SUPERFAMILY SSF81665 238 289 3.14E-17 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 Gene3D G3DSA:3.40.1110.10 500 612 2.9E-23 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 258 761 4.9E-81 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 Gene3D G3DSA:3.30.70.100 97 160 2.1E-17 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 SUPERFAMILY SSF81653 288 385 3.92E-21 T 06-07-2017 AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 Gene3D G3DSA:3.40.50.1000 613 751 5.1E-43 T 06-07-2017 IPR023214 HAD-like domain AM402_RS20010 81f06684dc31ddebb9c2b8923ed7e1f1 796 Gene3D G3DSA:3.40.50.1000 462 499 5.1E-43 T 06-07-2017 IPR023214 HAD-like domain AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.207 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 8.2E-41 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 8.2E-41 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 8.2E-41 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 8.2E-41 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.2E-46 T 06-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 06-07-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 SUPERFAMILY SSF54686 3 133 3.4E-55 T 06-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 Gene3D G3DSA:3.90.1170.10 23 133 7.1E-54 T 06-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 06-07-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00970 d9e4a39ddc70e41e291b695c1462a778 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.1E-59 T 06-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17335 5f420b4a6723fc043f4b0c7ee42ac18d 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 9.4E-96 T 06-07-2017 IPR011078 Uncharacterised protein family UPF0001 AM402_RS17335 5f420b4a6723fc043f4b0c7ee42ac18d 232 SUPERFAMILY SSF51419 1 225 2.88E-81 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS17335 5f420b4a6723fc043f4b0c7ee42ac18d 232 PIRSF PIRSF004848 1 232 5.6E-78 T 06-07-2017 IPR011078 Uncharacterised protein family UPF0001 AM402_RS17335 5f420b4a6723fc043f4b0c7ee42ac18d 232 Gene3D G3DSA:3.20.20.10 1 231 6.7E-90 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS17335 5f420b4a6723fc043f4b0c7ee42ac18d 232 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 06-07-2017 IPR011078 Uncharacterised protein family UPF0001 AM402_RS17335 5f420b4a6723fc043f4b0c7ee42ac18d 232 Pfam PF01168 Alanine racemase, N-terminal domain 8 227 5.9E-28 T 06-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS08595 6eb11e39c71ef795c40fe51bd5f135e2 64 PIRSF PIRSF039003 1 64 4.0E-33 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM402_RS08595 6eb11e39c71ef795c40fe51bd5f135e2 64 SUPERFAMILY SSF140319 1 62 9.29E-27 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM402_RS08595 6eb11e39c71ef795c40fe51bd5f135e2 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 9.6E-33 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM402_RS08595 6eb11e39c71ef795c40fe51bd5f135e2 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 6.0E-32 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM402_RS08595 6eb11e39c71ef795c40fe51bd5f135e2 64 Gene3D G3DSA:1.10.10.600 1 64 9.4E-34 T 06-07-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM402_RS14995 fc4643c356e79d7f8eebdf57875ddbe0 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 35.703 T 06-07-2017 IPR022866 Heat shock protein HspQ AM402_RS14995 fc4643c356e79d7f8eebdf57875ddbe0 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 3.1E-30 T 06-07-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM402_RS14995 fc4643c356e79d7f8eebdf57875ddbe0 105 SUPERFAMILY SSF141255 4 96 8.5E-29 T 06-07-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM402_RS14995 fc4643c356e79d7f8eebdf57875ddbe0 105 SMART SM00992 3 102 1.3E-34 T 06-07-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM402_RS14995 fc4643c356e79d7f8eebdf57875ddbe0 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 1.4E-19 T 06-07-2017 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 SUPERFAMILY SSF56801 17 554 6.28E-148 T 06-07-2017 AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 06-07-2017 IPR020845 AMP-binding, conserved site AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 Gene3D G3DSA:3.40.50.980 24 152 2.9E-42 T 06-07-2017 AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 Gene3D G3DSA:3.40.50.980 185 216 2.9E-42 T 06-07-2017 AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 Gene3D G3DSA:3.40.50.980 217 379 1.3E-40 T 06-07-2017 AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 1.8E-17 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 Gene3D G3DSA:2.30.38.10 380 450 2.3E-28 T 06-07-2017 AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 Gene3D G3DSA:3.30.300.30 457 558 1.6E-28 T 06-07-2017 AM402_RS12950 094ad4e2bae127d9070581f1c01e4cef 562 Pfam PF00501 AMP-binding enzyme 30 460 2.2E-111 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM402_RS11260 86f2912ec9bb9fde72fbf7b3d4c27eff 413 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 224 243 - T 06-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM402_RS11260 86f2912ec9bb9fde72fbf7b3d4c27eff 413 Pfam PF00266 Aminotransferase class-V 26 401 1.2E-143 T 06-07-2017 IPR000192 Aminotransferase class V domain AM402_RS11260 86f2912ec9bb9fde72fbf7b3d4c27eff 413 SUPERFAMILY SSF53383 6 408 2.28E-120 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS11260 86f2912ec9bb9fde72fbf7b3d4c27eff 413 Gene3D G3DSA:3.90.1150.10 293 405 3.4E-24 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS11260 86f2912ec9bb9fde72fbf7b3d4c27eff 413 Gene3D G3DSA:3.40.640.10 38 292 1.4E-80 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS11260 86f2912ec9bb9fde72fbf7b3d4c27eff 413 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 8 412 8.1E-170 T 06-07-2017 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 Pfam PF00162 Phosphoglycerate kinase 6 373 6.3E-140 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 Gene3D G3DSA:3.40.50.1270 175 371 1.5E-80 T 06-07-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 06-07-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.8E-83 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 Gene3D G3DSA:3.40.50.1260 5 174 1.5E-66 T 06-07-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.466 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 PIRSF PIRSF000724 1 387 1.0E-135 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18265 dc102ec0ed0418606d075430804c1976 387 SUPERFAMILY SSF53748 3 383 8.01E-146 T 06-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 Gene3D G3DSA:3.30.460.10 80 172 9.2E-6 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 SUPERFAMILY SSF109604 434 550 7.71E-14 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 SUPERFAMILY SSF81593 204 319 1.73E-9 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 40 874 2.2E-298 T 06-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 SUPERFAMILY SSF81891 360 462 7.32E-11 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 SUPERFAMILY SSF81891 497 658 7.32E-11 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 Pfam PF01966 HD domain 459 592 8.5E-15 T 06-07-2017 IPR006674 HD domain AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 SUPERFAMILY SSF81301 41 180 2.36E-25 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 881 323.218 T 06-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 Gene3D G3DSA:1.10.3210.10 429 622 2.4E-25 T 06-07-2017 IPR006674 HD domain AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 SMART SM00471 455 602 6.2E-13 T 06-07-2017 IPR003607 HD/PDEase domain AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 PIRSF PIRSF006288 15 881 0.0 T 06-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 SUPERFAMILY SSF55021 803 862 3.36E-9 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 SUPERFAMILY SSF55021 697 765 1.49E-9 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 Gene3D G3DSA:3.30.70.260 803 860 1.1E-8 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 Gene3D G3DSA:3.30.70.260 699 750 1.1E-4 T 06-07-2017 AM402_RS06235 6c48e0d3fb35e29d7f2fb694c0391314 881 Pfam PF08335 GlnD PII-uridylyltransferase 184 322 3.5E-36 T 06-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM402_RS09215 dc3a33638a278dea0719a372f32902a7 323 Pfam PF13378 Enolase C-terminal domain-like 124 271 3.4E-14 T 06-07-2017 IPR029065 Enolase C-terminal domain-like AM402_RS09215 dc3a33638a278dea0719a372f32902a7 323 SUPERFAMILY SSF54826 1 99 2.15E-27 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS09215 dc3a33638a278dea0719a372f32902a7 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 315 24.195 T 06-07-2017 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS09215 dc3a33638a278dea0719a372f32902a7 323 SMART SM00922 115 210 2.2E-8 T 06-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM402_RS09215 dc3a33638a278dea0719a372f32902a7 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 306 2.8E-114 T 06-07-2017 AM402_RS09215 dc3a33638a278dea0719a372f32902a7 323 Gene3D G3DSA:3.20.20.120 128 299 4.3E-35 T 06-07-2017 IPR029065 Enolase C-terminal domain-like AM402_RS09215 dc3a33638a278dea0719a372f32902a7 323 SUPERFAMILY SSF51604 104 310 1.23E-48 T 06-07-2017 IPR029065 Enolase C-terminal domain-like AM402_RS09215 dc3a33638a278dea0719a372f32902a7 323 Gene3D G3DSA:3.30.390.10 1 127 3.7E-44 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS17190 70116a9d71078a5a3c1026ce6d14eed4 153 Gene3D G3DSA:3.40.50.2020 1 145 4.9E-44 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS17190 70116a9d71078a5a3c1026ce6d14eed4 153 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 41.644 T 06-07-2017 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AM402_RS17190 70116a9d71078a5a3c1026ce6d14eed4 153 Pfam PF00156 Phosphoribosyl transferase domain 12 143 5.0E-15 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM402_RS17190 70116a9d71078a5a3c1026ce6d14eed4 153 SUPERFAMILY SSF53271 4 141 8.09E-32 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS20870 1635f2e333527d261c70c6fb5e8f2df4 223 SMART SM00052 3 214 5.8E-7 T 06-07-2017 IPR001633 EAL domain AM402_RS20870 1635f2e333527d261c70c6fb5e8f2df4 223 Pfam PF00563 EAL domain 3 209 5.5E-26 T 06-07-2017 IPR001633 EAL domain AM402_RS20870 1635f2e333527d261c70c6fb5e8f2df4 223 SUPERFAMILY SSF141868 3 219 9.68E-34 T 06-07-2017 IPR001633 EAL domain AM402_RS20870 1635f2e333527d261c70c6fb5e8f2df4 223 Gene3D G3DSA:3.20.20.450 3 217 5.6E-22 T 06-07-2017 IPR001633 EAL domain AM402_RS00400 95fb2240127a3129c32dc4f3bba3b383 313 Gene3D G3DSA:1.10.287.890 207 289 1.8E-34 T 06-07-2017 AM402_RS00400 95fb2240127a3129c32dc4f3bba3b383 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.968 T 06-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM402_RS00400 95fb2240127a3129c32dc4f3bba3b383 313 Pfam PF01715 IPP transferase 46 292 5.9E-87 T 06-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM402_RS00400 95fb2240127a3129c32dc4f3bba3b383 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 299 2.4E-118 T 06-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM402_RS00400 95fb2240127a3129c32dc4f3bba3b383 313 Gene3D G3DSA:3.40.50.300 9 178 2.0E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00400 95fb2240127a3129c32dc4f3bba3b383 313 SUPERFAMILY SSF52540 13 155 5.0E-18 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 SUPERFAMILY SSF52935 323 469 1.11E-35 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 Gene3D G3DSA:2.40.33.10 73 168 1.2E-31 T 06-07-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 5.3E-78 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 5.3E-78 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 5.3E-78 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 5.3E-78 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 5.3E-78 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 5.3E-78 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 5.3E-78 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 SUPERFAMILY SSF51621 1 74 9.42E-101 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 SUPERFAMILY SSF51621 156 338 9.42E-101 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.8E-29 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.1E-150 T 06-07-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 Gene3D G3DSA:3.20.20.60 169 325 9.2E-117 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 Gene3D G3DSA:3.20.20.60 2 72 9.2E-117 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.4E-186 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 SUPERFAMILY SSF50800 70 167 3.66E-29 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 Gene3D G3DSA:3.40.1380.20 326 469 7.1E-44 T 06-07-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS11295 8d4eccf819f00315b07f31d590c671c6 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 06-07-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS02725 f8ea480ffcc7e8614bec565ef394180f 246 Gene3D G3DSA:3.40.50.10490 62 243 1.7E-30 T 06-07-2017 AM402_RS02725 f8ea480ffcc7e8614bec565ef394180f 246 Gene3D G3DSA:1.10.10.10 6 61 9.3E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02725 f8ea480ffcc7e8614bec565ef394180f 246 SUPERFAMILY SSF53697 89 242 9.58E-30 T 06-07-2017 AM402_RS02725 f8ea480ffcc7e8614bec565ef394180f 246 SUPERFAMILY SSF46689 6 73 3.58E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02725 f8ea480ffcc7e8614bec565ef394180f 246 Pfam PF01380 SIS domain 112 219 7.6E-18 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS02725 f8ea480ffcc7e8614bec565ef394180f 246 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 70 4.7E-13 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Pfam PF13380 CoA binding domain 13 129 1.7E-20 T 06-07-2017 IPR003781 CoA-binding GO:0048037 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 SUPERFAMILY SSF55729 728 866 6.1E-22 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Pfam PF13302 Acetyltransferase (GNAT) domain 728 863 8.7E-9 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Gene3D G3DSA:3.40.630.30 722 874 8.4E-23 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 SUPERFAMILY SSF51735 2 136 3.94E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Pfam PF13549 ATP-grasp domain 473 694 6.9E-72 T 06-07-2017 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 SUPERFAMILY SSF56059 481 687 2.23E-26 T 06-07-2017 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 SUPERFAMILY SSF52210 287 447 6.41E-32 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 SMART SM00881 9 104 1.2E-26 T 06-07-2017 IPR003781 CoA-binding GO:0048037 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 2.5E-43 T 06-07-2017 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Gene3D G3DSA:3.40.50.261 128 278 4.2E-23 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Gene3D G3DSA:3.40.50.261 279 439 8.4E-14 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 SUPERFAMILY SSF52210 125 283 3.14E-35 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Gene3D G3DSA:3.40.50.720 1 127 2.9E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS16980 b71fadb469278ba3a3e224aa573fdaf8 886 Gene3D G3DSA:3.30.470.20 488 527 6.6E-6 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 Gene3D G3DSA:1.10.8.60 316 415 1.2E-37 T 06-07-2017 AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 8.4E-17 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 SMART SM00994 12 51 1.3E-23 T 06-07-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.704 T 06-07-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 SMART SM01086 317 412 1.2E-35 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 SMART SM00382 111 417 2.3E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.8E-20 T 06-07-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 SUPERFAMILY SSF52540 62 402 3.2E-74 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 2.6E-49 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 6 412 6.1E-213 T 06-07-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 SUPERFAMILY SSF57716 13 48 5.7E-12 T 06-07-2017 AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 Gene3D G3DSA:3.40.50.300 294 311 2.9E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18865 567c4286bf2c5572aea315eac3fe90e7 423 Gene3D G3DSA:3.40.50.300 65 253 2.9E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 Gene3D G3DSA:3.40.50.1220 187 340 3.6E-49 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 316 1.7E-18 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 SUPERFAMILY SSF52467 165 339 5.89E-32 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 174 1.2E-28 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 Gene3D G3DSA:3.40.50.970 351 535 2.5E-55 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 PIRSF PIRSF036565 1 546 5.1E-189 T 06-07-2017 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 Gene3D G3DSA:3.40.50.970 2 179 4.7E-69 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 SUPERFAMILY SSF52518 356 538 1.97E-44 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 SUPERFAMILY SSF52518 4 177 1.91E-38 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS14470 a688fe4a2f07ee449a428464581e0723 549 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 525 3.4E-20 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM402_RS15555 fbc214141c81e41aa0a51c37da8c05c9 647 SUPERFAMILY SSF52540 4 228 3.06E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15555 fbc214141c81e41aa0a51c37da8c05c9 647 Pfam PF00005 ABC transporter 24 172 1.2E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15555 fbc214141c81e41aa0a51c37da8c05c9 647 Pfam PF12704 MacB-like periplasmic core domain 271 488 7.0E-40 T 06-07-2017 IPR025857 MacB-like periplasmic core domain AM402_RS15555 fbc214141c81e41aa0a51c37da8c05c9 647 Pfam PF02687 FtsX-like permease family 526 640 9.6E-21 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AM402_RS15555 fbc214141c81e41aa0a51c37da8c05c9 647 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15555 fbc214141c81e41aa0a51c37da8c05c9 647 SMART SM00382 33 220 9.6E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15555 fbc214141c81e41aa0a51c37da8c05c9 647 Gene3D G3DSA:3.40.50.300 4 228 4.6E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12240 a23b65e32cf977abe57ad482324ae600 403 Pfam PF00480 ROK family 123 389 4.5E-43 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM402_RS12240 a23b65e32cf977abe57ad482324ae600 403 SUPERFAMILY SSF53067 210 398 1.39E-36 T 06-07-2017 AM402_RS12240 a23b65e32cf977abe57ad482324ae600 403 SUPERFAMILY SSF53067 82 207 5.83E-19 T 06-07-2017 AM402_RS12240 a23b65e32cf977abe57ad482324ae600 403 SUPERFAMILY SSF46785 9 75 3.64E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12240 a23b65e32cf977abe57ad482324ae600 403 Gene3D G3DSA:1.10.10.10 10 79 7.8E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12240 a23b65e32cf977abe57ad482324ae600 403 Gene3D G3DSA:3.30.420.40 83 221 1.1E-22 T 06-07-2017 AM402_RS12240 a23b65e32cf977abe57ad482324ae600 403 Gene3D G3DSA:3.30.420.40 222 371 2.3E-37 T 06-07-2017 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Pfam PF00364 Biotin-requiring enzyme 102 172 3.8E-21 T 06-07-2017 IPR000089 Biotin/lipoyl attachment AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Pfam PF00364 Biotin-requiring enzyme 4 73 8.9E-22 T 06-07-2017 IPR000089 Biotin/lipoyl attachment AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Pfam PF00364 Biotin-requiring enzyme 201 270 1.6E-21 T 06-07-2017 IPR000089 Biotin/lipoyl attachment AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 SUPERFAMILY SSF51230 1 94 8.9E-24 T 06-07-2017 IPR011053 Single hybrid motif AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 124 153 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Gene3D G3DSA:4.10.320.10 312 360 2.5E-21 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 SUPERFAMILY SSF51230 199 289 4.71E-23 T 06-07-2017 IPR011053 Single hybrid motif AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Pfam PF02817 e3 binding domain 320 355 5.0E-15 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 SUPERFAMILY SSF52777 381 622 1.38E-79 T 06-07-2017 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Gene3D G3DSA:3.30.559.10 382 623 5.6E-84 T 06-07-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 222 251 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 179 623 1.5E-219 T 06-07-2017 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Gene3D G3DSA:2.40.50.100 103 177 8.6E-21 T 06-07-2017 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Gene3D G3DSA:2.40.50.100 201 275 1.9E-21 T 06-07-2017 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 SUPERFAMILY SSF51230 101 193 3.66E-23 T 06-07-2017 IPR011053 Single hybrid motif AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Gene3D G3DSA:2.40.50.100 1 94 4.4E-23 T 06-07-2017 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 392 622 2.9E-79 T 06-07-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM402_RS07565 68759ffac6c636fcc60c505694412b3d 623 SUPERFAMILY SSF47005 314 359 4.97E-13 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 Pfam PF01039 Carboxyl transferase domain 99 240 1.3E-15 T 06-07-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.4E-36 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.4E-36 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.4E-36 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.4E-36 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.4E-36 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 Gene3D G3DSA:3.90.226.10 18 280 4.6E-77 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.917 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 SUPERFAMILY SSF52096 25 281 9.07E-87 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS08980 52fad1ff0646931050b72e2ed3a09da2 320 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 2.0E-146 T 06-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS11750 51fd281597d71b087c2a7ac6bba195a6 212 Hamap MF_00157 Ribonuclease T [rnt]. 1 212 115.587 T 06-07-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM402_RS11750 51fd281597d71b087c2a7ac6bba195a6 212 SMART SM00479 18 203 4.9E-34 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS11750 51fd281597d71b087c2a7ac6bba195a6 212 SUPERFAMILY SSF53098 12 207 1.03E-55 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS11750 51fd281597d71b087c2a7ac6bba195a6 212 Pfam PF00929 Exonuclease 20 192 1.6E-35 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS11750 51fd281597d71b087c2a7ac6bba195a6 212 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 3.4E-105 T 06-07-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM402_RS11750 51fd281597d71b087c2a7ac6bba195a6 212 Gene3D G3DSA:3.30.420.10 12 208 2.9E-57 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 Gene3D G3DSA:3.50.50.60 271 359 3.9E-47 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 Gene3D G3DSA:3.50.50.60 8 186 3.9E-47 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 8.6E-18 T 06-07-2017 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 8.6E-18 T 06-07-2017 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 8.6E-18 T 06-07-2017 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 8.6E-18 T 06-07-2017 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 393 3.0E-123 T 06-07-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 SUPERFAMILY SSF51905 8 181 9.66E-61 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 SUPERFAMILY SSF51905 270 380 9.66E-61 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16725 bcb93be9cb535440226a5578ceb33f21 395 Pfam PF01494 FAD binding domain 9 343 1.7E-28 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 AM402_RS07690 b5647e70ca8f30d107f321b727a27327 130 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM402_RS07690 b5647e70ca8f30d107f321b727a27327 130 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 31.665 T 06-07-2017 IPR002930 Glycine cleavage system H-protein AM402_RS07690 b5647e70ca8f30d107f321b727a27327 130 SUPERFAMILY SSF51230 4 128 1.44E-44 T 06-07-2017 IPR011053 Single hybrid motif AM402_RS07690 b5647e70ca8f30d107f321b727a27327 130 Pfam PF01597 Glycine cleavage H-protein 8 128 3.2E-47 T 06-07-2017 IPR002930 Glycine cleavage system H-protein AM402_RS07690 b5647e70ca8f30d107f321b727a27327 130 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 1.5E-54 T 06-07-2017 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM402_RS07690 b5647e70ca8f30d107f321b727a27327 130 Gene3D G3DSA:2.40.50.100 7 129 7.7E-50 T 06-07-2017 AM402_RS03395 c7cf2c725480e58cf595a48407b394a6 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 5.3E-25 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS03395 c7cf2c725480e58cf595a48407b394a6 327 SUPERFAMILY SSF52540 3 253 4.26E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03395 c7cf2c725480e58cf595a48407b394a6 327 Pfam PF00005 ABC transporter 24 181 2.3E-26 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS03395 c7cf2c725480e58cf595a48407b394a6 327 SMART SM00382 32 231 3.6E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS03395 c7cf2c725480e58cf595a48407b394a6 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.3E-16 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS03395 c7cf2c725480e58cf595a48407b394a6 327 Gene3D G3DSA:3.40.50.300 4 255 1.3E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03395 c7cf2c725480e58cf595a48407b394a6 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS06015 6385bb6909b975b17d0e8f22ed528933 788 Gene3D G3DSA:2.60.450.10 46 206 3.0E-23 T 06-07-2017 AM402_RS06015 6385bb6909b975b17d0e8f22ed528933 788 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 8 767 20.682 T 06-07-2017 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AM402_RS06015 6385bb6909b975b17d0e8f22ed528933 788 Pfam PF04453 Organic solvent tolerance protein 311 703 2.5E-100 T 06-07-2017 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AM402_RS06015 6385bb6909b975b17d0e8f22ed528933 788 Pfam PF03968 OstA-like protein 53 190 2.6E-22 T 06-07-2017 IPR005653 Organic solvent tolerance-like, N-terminal AM402_RS03175 aa37b7b65e1aad4abb5c08f0d344fc22 346 Gene3D G3DSA:3.40.190.10 181 338 1.2E-32 T 06-07-2017 AM402_RS03175 aa37b7b65e1aad4abb5c08f0d344fc22 346 Gene3D G3DSA:3.40.190.10 28 177 7.1E-55 T 06-07-2017 AM402_RS03175 aa37b7b65e1aad4abb5c08f0d344fc22 346 PIRSF PIRSF002756 1 338 1.4E-105 T 06-07-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AM402_RS03175 aa37b7b65e1aad4abb5c08f0d344fc22 346 SUPERFAMILY SSF53850 28 339 3.16E-94 T 06-07-2017 AM402_RS03175 aa37b7b65e1aad4abb5c08f0d344fc22 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 1.7E-124 T 06-07-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AM402_RS03175 aa37b7b65e1aad4abb5c08f0d344fc22 346 Pfam PF12849 PBP superfamily domain 23 306 8.1E-58 T 06-07-2017 IPR024370 PBP domain AM402_RS15830 76c5652d8793d762042a4070e369c636 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 4.8E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS15830 76c5652d8793d762042a4070e369c636 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 4.8E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS15830 76c5652d8793d762042a4070e369c636 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 4.8E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS15830 76c5652d8793d762042a4070e369c636 302 SUPERFAMILY SSF53850 96 290 1.71E-26 T 06-07-2017 AM402_RS15830 76c5652d8793d762042a4070e369c636 302 Gene3D G3DSA:1.10.10.10 11 89 1.3E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS15830 76c5652d8793d762042a4070e369c636 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.4E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS15830 76c5652d8793d762042a4070e369c636 302 Gene3D G3DSA:3.40.190.10 197 236 2.1E-7 T 06-07-2017 AM402_RS15830 76c5652d8793d762042a4070e369c636 302 Gene3D G3DSA:3.40.190.10 93 196 1.1E-14 T 06-07-2017 AM402_RS15830 76c5652d8793d762042a4070e369c636 302 SUPERFAMILY SSF46785 11 119 3.92E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS15830 76c5652d8793d762042a4070e369c636 302 Pfam PF03466 LysR substrate binding domain 95 287 2.4E-23 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS18000 89a9bfff2f996c61339bf10c0b194baa 192 Gene3D G3DSA:2.60.40.1090 41 192 1.9E-17 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18000 89a9bfff2f996c61339bf10c0b194baa 192 SUPERFAMILY SSF49401 40 192 3.63E-25 T 06-07-2017 IPR008966 Adhesion domain AM402_RS16615 f0f360d283d64ddeb0f0f5616e90e2e9 294 Pfam PF13479 AAA domain 12 210 4.9E-28 T 06-07-2017 AM402_RS16615 f0f360d283d64ddeb0f0f5616e90e2e9 294 SUPERFAMILY SSF52540 15 98 6.54E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16615 f0f360d283d64ddeb0f0f5616e90e2e9 294 Gene3D G3DSA:3.40.50.300 15 98 8.8E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14305 91e1457401ffb17aa7ac8c33d7bb520b 234 Pfam PF00005 ABC transporter 26 174 1.4E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS14305 91e1457401ffb17aa7ac8c33d7bb520b 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS14305 91e1457401ffb17aa7ac8c33d7bb520b 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 5.5E-107 T 06-07-2017 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 AM402_RS14305 91e1457401ffb17aa7ac8c33d7bb520b 234 SMART SM00382 35 223 7.3E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS14305 91e1457401ffb17aa7ac8c33d7bb520b 234 Gene3D G3DSA:3.40.50.300 5 227 4.0E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14305 91e1457401ffb17aa7ac8c33d7bb520b 234 SUPERFAMILY SSF52540 6 228 1.06E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01695 b1ecf4a63feb700204270fa6e26feba0 399 Pfam PF00155 Aminotransferase class I and II 44 387 2.0E-78 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS01695 b1ecf4a63feb700204270fa6e26feba0 399 Gene3D G3DSA:3.90.1150.10 280 393 2.6E-35 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS01695 b1ecf4a63feb700204270fa6e26feba0 399 SUPERFAMILY SSF53383 4 397 1.25E-123 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS01695 b1ecf4a63feb700204270fa6e26feba0 399 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 3 396 53.434 T 06-07-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AM402_RS01695 b1ecf4a63feb700204270fa6e26feba0 399 Gene3D G3DSA:3.40.640.10 62 279 2.1E-88 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS01695 b1ecf4a63feb700204270fa6e26feba0 399 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 242 251 - T 06-07-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM402_RS01695 b1ecf4a63feb700204270fa6e26feba0 399 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 6 398 2.0E-214 T 06-07-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AM402_RS10135 19008b6bcf39b90196fe02466e84110d 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.598 T 06-07-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM402_RS10135 19008b6bcf39b90196fe02466e84110d 208 Gene3D G3DSA:3.40.50.2020 2 208 4.4E-76 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS10135 19008b6bcf39b90196fe02466e84110d 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 7.4E-91 T 06-07-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM402_RS10135 19008b6bcf39b90196fe02466e84110d 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 6.7E-66 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS10135 19008b6bcf39b90196fe02466e84110d 208 SUPERFAMILY SSF53271 4 206 8.92E-67 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS07705 b896f795c53e419c1729f06039540b21 328 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 322 42.603 T 06-07-2017 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 AM402_RS07705 b896f795c53e419c1729f06039540b21 328 Gene3D G3DSA:3.30.70.1400 27 112 9.5E-33 T 06-07-2017 AM402_RS07705 b896f795c53e419c1729f06039540b21 328 SUPERFAMILY SSF103025 6 241 1.38E-57 T 06-07-2017 AM402_RS07705 b896f795c53e419c1729f06039540b21 328 SUPERFAMILY SSF101790 243 326 1.11E-21 T 06-07-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM402_RS07705 b896f795c53e419c1729f06039540b21 328 PIRSF PIRSF006487 1 328 1.3E-8 T 06-07-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM402_RS07705 b896f795c53e419c1729f06039540b21 328 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 185 251 2.2E-21 T 06-07-2017 IPR017703 YgfZ/GcvT conserved site AM402_RS07705 b896f795c53e419c1729f06039540b21 328 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 137 1.2E-8 T 06-07-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal AM402_RS17730 361a671c91c8c99ca458845084327b54 290 Pfam PF13614 AAA domain 3 150 1.7E-18 T 06-07-2017 IPR025669 AAA domain AM402_RS17730 361a671c91c8c99ca458845084327b54 290 Gene3D G3DSA:3.40.50.300 1 278 6.1E-31 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17730 361a671c91c8c99ca458845084327b54 290 SUPERFAMILY SSF52540 1 276 1.13E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09620 8f23c952492a560a22a7d81494cd874a 166 SUPERFAMILY SSF50341 16 156 3.01E-39 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM402_RS09620 8f23c952492a560a22a7d81494cd874a 166 Gene3D G3DSA:2.30.30.40 91 143 6.2E-9 T 06-07-2017 AM402_RS09620 8f23c952492a560a22a7d81494cd874a 166 Gene3D G3DSA:2.40.50.180 55 90 6.3E-9 T 06-07-2017 AM402_RS09620 8f23c952492a560a22a7d81494cd874a 166 Pfam PF01584 CheW-like domain 18 153 1.5E-36 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM402_RS09620 8f23c952492a560a22a7d81494cd874a 166 SMART SM00260 13 150 3.2E-42 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 PIRSF PIRSF000101 4 569 6.1E-294 T 06-07-2017 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 SUPERFAMILY SSF55103 276 567 4.14E-117 T 06-07-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 Pfam PF01565 FAD binding domain 47 166 2.7E-5 T 06-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 2.5E-147 T 06-07-2017 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 Gene3D G3DSA:3.30.1370.20 435 519 1.3E-43 T 06-07-2017 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 Gene3D G3DSA:3.30.43.10 3 90 1.2E-9 T 06-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 SUPERFAMILY SSF56176 10 271 1.64E-70 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 Gene3D G3DSA:3.30.465.10 106 268 1.2E-79 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 Gene3D G3DSA:3.30.70.610 269 310 4.2E-45 T 06-07-2017 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM402_RS14460 d90f08c7cb148be14a30ad4d25eb700b 589 Gene3D G3DSA:3.30.70.610 377 434 4.2E-45 T 06-07-2017 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 AM402_RS11950 f802cfa4f16bba07d0f19a7055c69197 217 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 6 181 1.6E-57 T 06-07-2017 IPR006008 Intracellular septation protein A GO:0016021 AM402_RS11950 f802cfa4f16bba07d0f19a7055c69197 217 Pfam PF04279 Intracellular septation protein A 6 175 2.8E-58 T 06-07-2017 IPR006008 Intracellular septation protein A GO:0016021 AM402_RS11950 f802cfa4f16bba07d0f19a7055c69197 217 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 6 181 17.385 T 06-07-2017 IPR006008 Intracellular septation protein A GO:0016021 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 463 481 - T 06-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 517 535 - T 06-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 490 508 - T 06-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Gene3D G3DSA:2.150.10.10 372 480 5.8E-18 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Gene3D G3DSA:2.150.10.10 481 659 5.2E-37 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 SUPERFAMILY SSF51120 483 629 5.16E-28 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Gene3D G3DSA:3.40.390.10 111 231 7.2E-27 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Gene3D G3DSA:3.40.390.10 278 356 7.2E-27 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 SUPERFAMILY SSF51120 355 490 2.75E-28 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 481 499 - T 06-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 PRINTS PR00313 NodO calcium binding signature 464 475 1.4E-11 T 06-07-2017 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 PRINTS PR00313 NodO calcium binding signature 476 484 1.4E-11 T 06-07-2017 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 PRINTS PR00313 NodO calcium binding signature 548 556 1.4E-11 T 06-07-2017 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 PRINTS PR00313 NodO calcium binding signature 568 577 1.4E-11 T 06-07-2017 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 SMART SM00235 116 339 5.1E-17 T 06-07-2017 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 SUPERFAMILY SSF55486 103 226 1.69E-32 T 06-07-2017 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 SUPERFAMILY SSF55486 271 353 1.69E-32 T 06-07-2017 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00413 Matrixin 138 301 5.1E-7 T 06-07-2017 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 458 479 3.4E-7 T 06-07-2017 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 91 107 3.4E-7 T 06-07-2017 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF08548 Peptidase M10 serralysin C terminal 356 678 8.3E-40 T 06-07-2017 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 520 537 0.0019 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 458 474 0.013 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 578 593 1.1 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 475 492 0.016 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 439 454 0.14 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 502 519 0.015 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 542 555 0.99 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18080 e53681e4336a55700a65da7d6f6468bb 687 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 561 575 0.85 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 198 208 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 365 385 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 469 485 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 334 350 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 PRINTS PR00301 70kDa heat shock protein signature 388 407 4.8E-80 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 SUPERFAMILY SSF100934 535 608 7.06E-6 T 06-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 SUPERFAMILY SSF100920 384 540 1.96E-61 T 06-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Gene3D G3DSA:3.30.420.40 193 229 1.4E-32 T 06-07-2017 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Gene3D G3DSA:3.30.420.40 319 361 1.4E-32 T 06-07-2017 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 1.1E-289 T 06-07-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 635 36.852 T 06-07-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Gene3D G3DSA:3.30.30.30 53 106 5.7E-27 T 06-07-2017 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Pfam PF00012 Hsp70 protein 4 601 4.7E-264 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 SUPERFAMILY SSF53067 187 382 9.26E-68 T 06-07-2017 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Gene3D G3DSA:3.90.640.10 230 315 6.7E-32 T 06-07-2017 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Gene3D G3DSA:3.30.420.40 119 192 8.8E-64 T 06-07-2017 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Gene3D G3DSA:3.30.420.40 4 52 8.8E-64 T 06-07-2017 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Gene3D G3DSA:2.60.34.10 390 531 7.5E-71 T 06-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 Gene3D G3DSA:1.20.1270.10 532 600 6.1E-24 T 06-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM402_RS19365 03bbfeb53e7c66a6753f7370b960238f 641 SUPERFAMILY SSF53067 4 183 9.5E-66 T 06-07-2017 AM402_RS21870 4b4005e1f5f45f11661f2f79949fb437 279 Gene3D G3DSA:3.20.20.20 3 268 2.5E-69 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21870 4b4005e1f5f45f11661f2f79949fb437 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21870 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21870 4b4005e1f5f45f11661f2f79949fb437 279 Pfam PF00809 Pterin binding enzyme 5 248 2.5E-69 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21870 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21870 4b4005e1f5f45f11661f2f79949fb437 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 06-07-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 SUPERFAMILY SSF75217 69 244 4.51E-50 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 80 5.3E-21 T 06-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 SUPERFAMILY SSF55315 3 77 2.71E-21 T 06-07-2017 IPR029064 50S ribosomal protein L30e-like AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 SMART SM00967 5 81 5.6E-22 T 06-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 Gene3D G3DSA:3.30.1330.30 2 77 3.8E-27 T 06-07-2017 IPR029064 50S ribosomal protein L30e-like AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 44.498 T 06-07-2017 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 Gene3D G3DSA:3.40.1280.10 95 244 2.1E-55 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 6.5E-41 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM402_RS00360 b08339e9f24dcea44c6c24f0c67ce916 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 9.3E-92 T 06-07-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 AM402_RS08900 128521fb18b33526d7877c7da31bc094 184 Pfam PF00210 Ferritin-like domain 38 172 3.9E-25 T 06-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM402_RS08900 128521fb18b33526d7877c7da31bc094 184 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 58 74 4.4E-8 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM402_RS08900 128521fb18b33526d7877c7da31bc094 184 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 154 172 4.4E-8 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM402_RS08900 128521fb18b33526d7877c7da31bc094 184 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 82 98 4.4E-8 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM402_RS08900 128521fb18b33526d7877c7da31bc094 184 PIRSF PIRSF005900 15 182 1.2E-48 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM402_RS08900 128521fb18b33526d7877c7da31bc094 184 Gene3D G3DSA:1.20.1260.10 19 175 5.7E-55 T 06-07-2017 IPR012347 Ferritin-related AM402_RS08900 128521fb18b33526d7877c7da31bc094 184 SUPERFAMILY SSF47240 21 174 1.23E-44 T 06-07-2017 IPR009078 Ferritin-like superfamily AM402_RS18855 146ac69e656b9da18fb9ad83db936b0f 96 SMART SM00411 6 95 5.2E-44 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS18855 146ac69e656b9da18fb9ad83db936b0f 96 Pfam PF00216 Bacterial DNA-binding protein 6 95 2.4E-33 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS18855 146ac69e656b9da18fb9ad83db936b0f 96 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 7.8E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS18855 146ac69e656b9da18fb9ad83db936b0f 96 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 7.8E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS18855 146ac69e656b9da18fb9ad83db936b0f 96 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 7.8E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS18855 146ac69e656b9da18fb9ad83db936b0f 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM402_RS18855 146ac69e656b9da18fb9ad83db936b0f 96 Gene3D G3DSA:4.10.520.10 6 96 3.0E-38 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS18855 146ac69e656b9da18fb9ad83db936b0f 96 SUPERFAMILY SSF47729 6 95 1.0E-32 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS06210 a1d8f1541e9bff60d729ffdf3736bca2 482 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.3E-88 T 06-07-2017 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AM402_RS06210 a1d8f1541e9bff60d729ffdf3736bca2 482 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.7E-220 T 06-07-2017 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 AM402_RS06210 a1d8f1541e9bff60d729ffdf3736bca2 482 Gene3D G3DSA:3.30.1360.60 399 474 6.3E-26 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS06210 a1d8f1541e9bff60d729ffdf3736bca2 482 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 5.1E-21 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS06210 a1d8f1541e9bff60d729ffdf3736bca2 482 SUPERFAMILY SSF55604 403 474 4.18E-20 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS06210 a1d8f1541e9bff60d729ffdf3736bca2 482 Pfam PF00367 phosphotransferase system, EIIB 404 436 1.2E-12 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS06210 a1d8f1541e9bff60d729ffdf3736bca2 482 Pfam PF02378 Phosphotransferase system, EIIC 13 320 3.9E-81 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM402_RS06210 a1d8f1541e9bff60d729ffdf3736bca2 482 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.1E-76 T 06-07-2017 IPR020536 Thil, AANH domain GO:0004810 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 9.4E-42 T 06-07-2017 IPR026340 Thiazole biosynthesis domain GO:0052837 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 SUPERFAMILY SSF52402 174 372 7.06E-42 T 06-07-2017 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 SUPERFAMILY SSF52821 400 481 1.57E-10 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 226.658 T 06-07-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 SMART SM00981 75 165 1.3E-23 T 06-07-2017 IPR004114 THUMP domain GO:0003723 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 Pfam PF02926 THUMP domain 29 161 3.9E-26 T 06-07-2017 IPR004114 THUMP domain GO:0003723 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 4.9E-129 T 06-07-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 SUPERFAMILY SSF143437 1 173 1.31E-48 T 06-07-2017 AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 Gene3D G3DSA:3.40.250.10 402 480 6.7E-10 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS18960 2a54546dfa84ac3b01ab84f96815200f 483 Gene3D G3DSA:3.40.50.620 173 333 1.1E-37 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS12015 8403b98c99c138f55239033438b712b4 308 Pfam PF00849 RNA pseudouridylate synthase 75 207 9.9E-18 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS12015 8403b98c99c138f55239033438b712b4 308 SUPERFAMILY SSF55174 11 104 1.06E-8 T 06-07-2017 AM402_RS12015 8403b98c99c138f55239033438b712b4 308 Pfam PF01479 S4 domain 10 51 1.1E-7 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS12015 8403b98c99c138f55239033438b712b4 308 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 79 238 3.7E-60 T 06-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM402_RS12015 8403b98c99c138f55239033438b712b4 308 SUPERFAMILY SSF55120 75 243 5.6E-44 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS12015 8403b98c99c138f55239033438b712b4 308 SMART SM00363 9 80 1.6E-4 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS12015 8403b98c99c138f55239033438b712b4 308 Gene3D G3DSA:3.10.290.10 9 67 8.3E-11 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS12015 8403b98c99c138f55239033438b712b4 308 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 113 127 - T 06-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM402_RS15180 99d6b7cc4967298b325b2eeb981431f4 97 Pfam PF09204 Bacterial self-protective colicin-like immunity 5 87 2.4E-18 T 06-07-2017 IPR015287 Colicin D immunity protein domain GO:0015643|GO:0030153 AM402_RS19215 f75dc29f4c0318a09addf1a8829006d7 378 Pfam PF01924 Hydrogenase formation hypA family 12 373 2.1E-153 T 06-07-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM402_RS19215 f75dc29f4c0318a09addf1a8829006d7 378 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 375 4.4E-157 T 06-07-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM402_RS19215 f75dc29f4c0318a09addf1a8829006d7 378 PIRSF PIRSF005622 1 378 1.5E-155 T 06-07-2017 IPR002780 Hydrogenase formation HypD protein GO:0046872 AM402_RS15055 81fdba8ca62ad41edc61653ffaa259ed 134 SMART SM01022 15 132 9.6E-37 T 06-07-2017 IPR007374 ASCH domain AM402_RS15055 81fdba8ca62ad41edc61653ffaa259ed 134 Gene3D G3DSA:3.10.400.10 4 133 5.6E-48 T 06-07-2017 AM402_RS15055 81fdba8ca62ad41edc61653ffaa259ed 134 SUPERFAMILY SSF88697 3 132 2.73E-42 T 06-07-2017 IPR015947 PUA-like domain AM402_RS15055 81fdba8ca62ad41edc61653ffaa259ed 134 Pfam PF04266 ASCH domain 24 132 1.2E-22 T 06-07-2017 IPR007374 ASCH domain AM402_RS15055 81fdba8ca62ad41edc61653ffaa259ed 134 PIRSF PIRSF021320 3 134 1.1E-41 T 06-07-2017 IPR009326 Protein of unknown function DUF984 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 Gene3D G3DSA:3.30.70.120 1 112 3.2E-47 T 06-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 PRINTS PR00340 P-II protein signature 2 17 2.3E-37 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 PRINTS PR00340 P-II protein signature 23 41 2.3E-37 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 PRINTS PR00340 P-II protein signature 83 103 2.3E-37 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 PRINTS PR00340 P-II protein signature 52 75 2.3E-37 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 06-07-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 06-07-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 SUPERFAMILY SSF54913 1 112 3.81E-42 T 06-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 SMART SM00938 4 105 2.8E-61 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 PIRSF PIRSF039144 1 112 3.6E-50 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS18815 b9b1c7298373953833646dfc9b207568 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.2E-40 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 PIRSF PIRSF006769 13 383 1.7E-128 T 06-07-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 Pfam PF01872 RibD C-terminal domain 162 377 7.1E-50 T 06-07-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 Gene3D G3DSA:3.40.140.10 17 144 2.2E-38 T 06-07-2017 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 65 103 - T 06-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 SUPERFAMILY SSF53597 159 380 7.65E-53 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 Gene3D G3DSA:3.40.430.10 145 381 2.3E-62 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 22 378 3.7E-135 T 06-07-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 SUPERFAMILY SSF53927 18 160 2.01E-50 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 17 114 8.2E-24 T 06-07-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AM402_RS19030 0322d1cb8ba657dc0032c1312f013fb6 385 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 161 382 6.5E-65 T 06-07-2017 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AM402_RS02345 f18e89294f4d8f764cf2f6285ed676d0 330 SUPERFAMILY SSF55681 5 324 3.98E-100 T 06-07-2017 AM402_RS02345 f18e89294f4d8f764cf2f6285ed676d0 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 3.5E-96 T 06-07-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM402_RS02345 f18e89294f4d8f764cf2f6285ed676d0 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.314 T 06-07-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM402_RS02345 f18e89294f4d8f764cf2f6285ed676d0 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.9E-176 T 06-07-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM402_RS02345 f18e89294f4d8f764cf2f6285ed676d0 330 PIRSF PIRSF001555 1 329 4.4E-151 T 06-07-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 AM402_RS02345 f18e89294f4d8f764cf2f6285ed676d0 330 Gene3D G3DSA:3.30.930.10 2 325 3.6E-153 T 06-07-2017 AM402_RS17355 24599f0eeba33f80dde35633179d5152 376 Pfam PF06969 HemN C-terminal domain 303 364 7.4E-11 T 06-07-2017 IPR010723 HemN, C-terminal AM402_RS17355 24599f0eeba33f80dde35633179d5152 376 Gene3D G3DSA:3.80.30.20 7 239 2.2E-28 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AM402_RS17355 24599f0eeba33f80dde35633179d5152 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 6.5E-142 T 06-07-2017 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM402_RS17355 24599f0eeba33f80dde35633179d5152 376 Pfam PF04055 Radical SAM superfamily 11 173 9.5E-18 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS17355 24599f0eeba33f80dde35633179d5152 376 SMART SM00729 6 223 3.1E-49 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM402_RS17355 24599f0eeba33f80dde35633179d5152 376 SUPERFAMILY SSF102114 5 376 1.83E-108 T 06-07-2017 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 7.4E-33 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 9.6E-29 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 SUPERFAMILY SSF46557 3 78 1.83E-29 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 06-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 Gene3D G3DSA:1.10.287.180 1 75 5.1E-36 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 Gene3D G3DSA:3.10.50.30 79 157 9.5E-32 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.702 T 06-07-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 PIRSF PIRSF006092 1 158 9.4E-57 T 06-07-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.8E-60 T 06-07-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 SUPERFAMILY SSF54534 81 157 4.58E-24 T 06-07-2017 AM402_RS00185 24cd20ef604f1051ae2d98480f6e8a40 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 06-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM402_RS07490 2ca60741364656400657b28368b32123 902 SUPERFAMILY SSF81767 227 368 9.55E-44 T 06-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 06-07-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AM402_RS07490 2ca60741364656400657b28368b32123 902 SUPERFAMILY SSF52540 416 618 3.22E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07490 2ca60741364656400657b28368b32123 902 Gene3D G3DSA:1.10.3060.10 648 831 1.4E-59 T 06-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 Gene3D G3DSA:3.40.50.300 417 619 8.8E-89 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07490 2ca60741364656400657b28368b32123 902 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.6E-69 T 06-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 SMART SM00957 6 402 0.0 T 06-07-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 SMART SM00958 228 358 1.6E-83 T 06-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 Gene3D G3DSA:3.90.1440.10 230 368 1.5E-46 T 06-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 Pfam PF02810 SEC-C motif 882 900 3.1E-10 T 06-07-2017 IPR004027 SEC-C motif AM402_RS07490 2ca60741364656400657b28368b32123 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 2.4E-39 T 06-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 Pfam PF07517 SecA DEAD-like domain 7 402 2.8E-134 T 06-07-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 Gene3D G3DSA:3.40.50.300 369 416 9.7E-127 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07490 2ca60741364656400657b28368b32123 902 Gene3D G3DSA:3.40.50.300 3 228 9.7E-127 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07490 2ca60741364656400657b28368b32123 902 SUPERFAMILY SSF52540 368 415 4.88E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07490 2ca60741364656400657b28368b32123 902 SUPERFAMILY SSF52540 5 228 4.88E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07490 2ca60741364656400657b28368b32123 902 PRINTS PR00906 SecA protein signature 117 127 5.3E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 PRINTS PR00906 SecA protein signature 101 115 5.3E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 PRINTS PR00906 SecA protein signature 339 361 5.3E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 PRINTS PR00906 SecA protein signature 413 426 5.3E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 PRINTS PR00906 SecA protein signature 63 87 5.3E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 PRINTS PR00906 SecA protein signature 376 393 5.3E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 PRINTS PR00906 SecA protein signature 170 190 5.3E-74 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.837 T 06-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM402_RS07490 2ca60741364656400657b28368b32123 902 SUPERFAMILY SSF81886 620 840 2.35E-85 T 06-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM402_RS07490 2ca60741364656400657b28368b32123 902 SUPERFAMILY SSF81886 878 890 2.35E-85 T 06-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.704 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 Gene3D G3DSA:3.40.50.720 140 264 2.9E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.1E-40 T 06-07-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 Gene3D G3DSA:3.40.192.10 7 139 1.5E-52 T 06-07-2017 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 SUPERFAMILY SSF53223 1 122 1.82E-41 T 06-07-2017 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 06-07-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 SUPERFAMILY SSF51735 123 284 2.63E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.8E-67 T 06-07-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.5E-87 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.5E-87 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.5E-87 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 5.5E-87 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 5.5E-87 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.5E-87 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.5E-87 T 06-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS06885 8db3e8729ab77bcbedc22a5599362c3e 290 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 06-07-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 6.3E-20 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 SMART SM00895 97 224 1.3E-16 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 Gene3D G3DSA:1.10.10.10 5 76 1.9E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.7E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.7E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 SUPERFAMILY SSF48008 92 230 3.14E-25 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 Gene3D G3DSA:1.20.120.530 92 235 6.1E-31 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 SMART SM00345 14 73 1.3E-18 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 SUPERFAMILY SSF46785 1 77 1.69E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS13295 ccc6341e2783a88c3b1a96656a0d8c33 237 Pfam PF07729 FCD domain 98 223 1.6E-23 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Gene3D G3DSA:3.40.50.300 2 192 9.8E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.7E-49 T 06-07-2017 IPR013842 GTP-binding protein LepA, C-terminal AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.268 T 06-07-2017 IPR006297 Elongation factor 4 GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 SUPERFAMILY SSF52540 2 235 7.55E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Pfam PF03144 Elongation factor Tu domain 2 205 275 5.4E-10 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Gene3D G3DSA:3.30.70.870 291 369 9.1E-26 T 06-07-2017 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Pfam PF00679 Elongation factor G C-terminus 399 479 1.0E-18 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.3E-302 T 06-07-2017 IPR006297 Elongation factor 4 GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Gene3D G3DSA:3.30.70.240 401 489 8.7E-20 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Gene3D G3DSA:2.40.30.10 193 289 5.3E-26 T 06-07-2017 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 3.5E-17 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.4E-51 T 06-07-2017 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 SUPERFAMILY SSF54980 292 370 2.45E-18 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS08405 0522e4cdb48aa2f8a81064b9bb7f240d 598 SUPERFAMILY SSF54980 399 493 4.27E-24 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 Gene3D G3DSA:2.40.50.140 5 67 6.0E-32 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 PRINTS PR00050 Cold shock protein signature 7 22 4.6E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 PRINTS PR00050 Cold shock protein signature 43 61 4.6E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 PRINTS PR00050 Cold shock protein signature 28 37 4.6E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 06-07-2017 IPR019844 Cold-shock conserved site AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.6E-34 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 SUPERFAMILY SSF50249 3 68 6.48E-26 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 PIRSF PIRSF002599 1 70 1.5E-25 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 AM402_RS14920 ebf306630ca7f8e223f803a9b70b0749 70 SMART SM00357 6 70 2.9E-30 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 Pfam PF00158 Sigma-54 interaction domain 137 303 1.6E-72 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 Gene3D G3DSA:1.10.8.60 310 387 1.1E-21 T 06-07-2017 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 Gene3D G3DSA:1.10.10.60 392 439 9.6E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 SMART SM00448 7 118 4.1E-33 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 Gene3D G3DSA:3.40.50.300 135 308 1.7E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 SUPERFAMILY SSF52540 136 380 6.01E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 Gene3D G3DSA:3.40.50.2300 5 124 9.9E-37 T 06-07-2017 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 SMART SM00382 157 300 1.1E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 SUPERFAMILY SSF46689 350 439 2.24E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 SUPERFAMILY SSF52172 6 181 2.7E-43 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS08505 fe07fe640ec017e30b62ed051feaf5c4 445 Pfam PF00072 Response regulator receiver domain 10 118 2.0E-30 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 SUPERFAMILY SSF81271 402 468 3.27E-22 T 06-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 Pfam PF13291 ACT domain 667 743 1.9E-17 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 Gene3D G3DSA:3.10.20.30 409 471 3.2E-26 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 SMART SM00954 251 361 6.8E-67 T 06-07-2017 IPR007685 RelA/SpoT GO:0015969 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 Pfam PF13328 HD domain 50 191 1.5E-40 T 06-07-2017 IPR003607 HD/PDEase domain AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 Gene3D G3DSA:3.30.460.10 194 341 5.0E-52 T 06-07-2017 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 Gene3D G3DSA:3.30.70.260 667 742 9.3E-28 T 06-07-2017 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 Pfam PF02824 TGS domain 409 468 2.5E-21 T 06-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 3.8E-37 T 06-07-2017 IPR007685 RelA/SpoT GO:0015969 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 SUPERFAMILY SSF81301 196 413 5.07E-64 T 06-07-2017 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 743 6.7E-188 T 06-07-2017 IPR004811 RelA/SpoT family GO:0015969 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 SUPERFAMILY SSF55021 671 743 2.29E-13 T 06-07-2017 AM402_RS18420 d1cb188cd3b0a1ec8e6818d961c1047d 746 SUPERFAMILY SSF109604 52 207 1.04E-43 T 06-07-2017 AM402_RS16275 ecd00991cb3351fe1935aed67e270a7d 261 SUPERFAMILY SSF53474 17 259 4.69E-49 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS16275 ecd00991cb3351fe1935aed67e270a7d 261 Pfam PF12697 Alpha/beta hydrolase family 24 251 2.3E-20 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AM402_RS16275 ecd00991cb3351fe1935aed67e270a7d 261 Gene3D G3DSA:3.40.50.1820 9 259 1.4E-47 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS01740 8eb8608a19aa5bc93ea64c8b991d52d6 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 4.0E-66 T 06-07-2017 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AM402_RS01740 8eb8608a19aa5bc93ea64c8b991d52d6 425 Pfam PF00534 Glycosyl transferases group 1 253 398 5.3E-13 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS01740 8eb8608a19aa5bc93ea64c8b991d52d6 425 SUPERFAMILY SSF53756 57 402 3.24E-16 T 06-07-2017 AM402_RS00460 dd0ed7c271384e360e223132fff5ab09 303 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 286 48.168 T 06-07-2017 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AM402_RS00460 dd0ed7c271384e360e223132fff5ab09 303 Pfam PF02666 Phosphatidylserine decarboxylase 62 283 3.1E-59 T 06-07-2017 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM402_RS00460 dd0ed7c271384e360e223132fff5ab09 303 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 284 5.7E-89 T 06-07-2017 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM402_RS00140 6f0cd7e3ea069342789bd7741ee14549 150 Gene3D G3DSA:3.30.300.70 2 79 1.8E-30 T 06-07-2017 IPR028989 Ribosome maturation factor RimP, N-terminal AM402_RS00140 6f0cd7e3ea069342789bd7741ee14549 150 SUPERFAMILY SSF75420 3 82 1.7E-22 T 06-07-2017 IPR028989 Ribosome maturation factor RimP, N-terminal AM402_RS00140 6f0cd7e3ea069342789bd7741ee14549 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 23.211 T 06-07-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 AM402_RS00140 6f0cd7e3ea069342789bd7741ee14549 150 SUPERFAMILY SSF74942 83 150 1.31E-16 T 06-07-2017 IPR028998 Ribosome maturation factor RimP, C-terminal AM402_RS00140 6f0cd7e3ea069342789bd7741ee14549 150 Gene3D G3DSA:2.30.30.180 88 147 1.8E-12 T 06-07-2017 IPR028998 Ribosome maturation factor RimP, C-terminal AM402_RS00140 6f0cd7e3ea069342789bd7741ee14549 150 Pfam PF02576 Putative ribosome maturation factor RimP 12 146 5.7E-46 T 06-07-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 AM402_RS13835 a8dca5afe04ee693c2623373015dd68a 422 Pfam PF04860 Phage portal protein 61 391 5.4E-89 T 06-07-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein AM402_RS13835 a8dca5afe04ee693c2623373015dd68a 422 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 53 397 2.4E-77 T 06-07-2017 IPR006427 Phage portal protein, HK97 AM402_RS01790 153f1bb248617981cf8a3c7ea411825f 78 Pfam PF00830 Ribosomal L28 family 3 62 1.4E-25 T 06-07-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01790 153f1bb248617981cf8a3c7ea411825f 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.145 T 06-07-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01790 153f1bb248617981cf8a3c7ea411825f 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 8.1E-28 T 06-07-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01790 153f1bb248617981cf8a3c7ea411825f 78 Gene3D G3DSA:2.30.170.40 2 77 3.2E-35 T 06-07-2017 AM402_RS01790 153f1bb248617981cf8a3c7ea411825f 78 SUPERFAMILY SSF143800 1 77 1.96E-29 T 06-07-2017 AM402_RS11720 3312f7cb5c17e41b975a512b25ac6598 101 Pfam PF01381 Helix-turn-helix 12 66 1.2E-13 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS11720 3312f7cb5c17e41b975a512b25ac6598 101 SUPERFAMILY SSF47413 4 69 4.83E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11720 3312f7cb5c17e41b975a512b25ac6598 101 Gene3D G3DSA:1.10.260.40 8 78 4.5E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11720 3312f7cb5c17e41b975a512b25ac6598 101 SMART SM00530 11 66 1.4E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS16475 e5a203cbb2fdd22ff7b8062353642a8c 354 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 181 262 4.4E-12 T 06-07-2017 IPR006528 Phage head morphogenesis domain AM402_RS16475 e5a203cbb2fdd22ff7b8062353642a8c 354 Pfam PF04233 Phage Mu protein F like protein 165 258 4.3E-6 T 06-07-2017 IPR006528 Phage head morphogenesis domain AM402_RS15060 23d8ee178f1e8b8fa614ebfc3b288b2d 190 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 38 183 1.2E-32 T 06-07-2017 IPR005586 ABC-type transport auxiliary lipoprotein component AM402_RS15060 23d8ee178f1e8b8fa614ebfc3b288b2d 190 Gene3D G3DSA:3.40.50.10610 13 189 5.9E-12 T 06-07-2017 IPR005586 ABC-type transport auxiliary lipoprotein component AM402_RS15060 23d8ee178f1e8b8fa614ebfc3b288b2d 190 SUPERFAMILY SSF159594 34 189 1.02E-24 T 06-07-2017 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 Gene3D G3DSA:1.10.287.40 1 104 1.9E-25 T 06-07-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 SUPERFAMILY SSF46589 1 112 2.04E-32 T 06-07-2017 IPR010978 tRNA-binding arm GO:0000166 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.8E-31 T 06-07-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 6.7E-35 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 6.7E-35 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 6.7E-35 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 6.7E-35 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 6.7E-35 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 Gene3D G3DSA:3.30.930.10 105 426 7.7E-141 T 06-07-2017 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 PIRSF PIRSF001529 1 429 2.5E-184 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 405 1.6E-37 T 06-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 41.456 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 1.1E-181 T 06-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM402_RS15490 77ee1cf9f64ee88901bc4e722e773696 429 SUPERFAMILY SSF55681 116 423 9.95E-101 T 06-07-2017 AM402_RS15590 5fc35155504067f95fe6bbe49ab3d651 234 Gene3D G3DSA:1.10.3720.10 9 227 2.1E-37 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS15590 5fc35155504067f95fe6bbe49ab3d651 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 11 227 1.7E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS15590 5fc35155504067f95fe6bbe49ab3d651 234 SUPERFAMILY SSF161098 7 212 5.1E-35 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS09080 765041f58422c32ffa72f14a208ab7bf 164 Gene3D G3DSA:1.10.3190.10 53 164 9.9E-48 T 06-07-2017 IPR023146 YfbU, alpha-helical bundle domain AM402_RS09080 765041f58422c32ffa72f14a208ab7bf 164 Gene3D G3DSA:1.10.287.680 1 51 3.4E-30 T 06-07-2017 IPR023145 YfbU, helix-hairpin domain AM402_RS09080 765041f58422c32ffa72f14a208ab7bf 164 Pfam PF03887 YfbU domain 1 164 1.9E-68 T 06-07-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU AM402_RS09080 765041f58422c32ffa72f14a208ab7bf 164 PIRSF PIRSF006272 1 164 2.2E-72 T 06-07-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU AM402_RS09080 765041f58422c32ffa72f14a208ab7bf 164 SUPERFAMILY SSF116960 1 164 6.02E-67 T 06-07-2017 AM402_RS09080 765041f58422c32ffa72f14a208ab7bf 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 37.257 T 06-07-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU AM402_RS09080 765041f58422c32ffa72f14a208ab7bf 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 2.0E-79 T 06-07-2017 IPR005587 Uncharacterised protein family UPF0304, YfbU AM402_RS13955 6735968a815b397b41020ef7df71632a 176 Gene3D G3DSA:1.10.3210.10 1 174 5.3E-45 T 06-07-2017 IPR006674 HD domain AM402_RS13955 6735968a815b397b41020ef7df71632a 176 SUPERFAMILY SSF109604 1 172 1.26E-39 T 06-07-2017 AM402_RS14225 6735968a815b397b41020ef7df71632a 176 Gene3D G3DSA:1.10.3210.10 1 174 5.3E-45 T 06-07-2017 IPR006674 HD domain AM402_RS14225 6735968a815b397b41020ef7df71632a 176 SUPERFAMILY SSF109604 1 172 1.26E-39 T 06-07-2017 AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 SMART SM00316 648 719 9.9E-26 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Gene3D G3DSA:3.30.420.140 327 449 3.2E-50 T 06-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 SUPERFAMILY SSF47781 469 557 9.78E-28 T 06-07-2017 IPR010994 RuvA domain 2-like AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Pfam PF09371 Tex-like protein N-terminal domain 9 193 3.0E-71 T 06-07-2017 IPR018974 Tex-like protein, N-terminal AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Gene3D G3DSA:1.10.3500.10 110 322 4.9E-104 T 06-07-2017 IPR023323 Tex-like domain AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Gene3D G3DSA:1.10.3500.10 450 497 4.9E-104 T 06-07-2017 IPR023323 Tex-like domain AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Gene3D G3DSA:1.10.150.310 498 629 5.9E-48 T 06-07-2017 IPR023097 Tex RuvX-like domain AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Pfam PF12836 Helix-hairpin-helix motif 490 554 1.5E-27 T 06-07-2017 AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Gene3D G3DSA:1.10.10.650 1 109 1.9E-47 T 06-07-2017 IPR023319 Tex-like protein, HTH domain AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 SUPERFAMILY SSF47781 559 631 1.62E-19 T 06-07-2017 IPR010994 RuvA domain 2-like AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 SUPERFAMILY SSF50249 637 726 2.61E-25 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 SMART SM00732 326 423 2.8E-36 T 06-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Pfam PF00575 S1 RNA binding domain 650 719 4.6E-23 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Gene3D G3DSA:2.40.50.140 632 719 1.8E-28 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 Pfam PF16921 Tex protein YqgF-like domain 327 450 3.8E-51 T 06-07-2017 IPR032639 Tex protein, YqgF-like domain AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 SUPERFAMILY SSF158832 2 321 9.55E-122 T 06-07-2017 AM402_RS03195 f0076bffb397e529beb471da4d77bd02 777 SUPERFAMILY SSF53098 322 468 4.05E-50 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS02155 e6afa227efa1e9f454ef187e47c4e717 270 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 204 1.1E-9 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS02155 e6afa227efa1e9f454ef187e47c4e717 270 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 270 129.134 T 06-07-2017 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AM402_RS02155 e6afa227efa1e9f454ef187e47c4e717 270 SUPERFAMILY SSF56784 5 261 2.75E-52 T 06-07-2017 IPR023214 HAD-like domain AM402_RS02155 e6afa227efa1e9f454ef187e47c4e717 270 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 5 258 7.3E-108 T 06-07-2017 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AM402_RS02155 e6afa227efa1e9f454ef187e47c4e717 270 Gene3D G3DSA:3.40.50.1000 3 23 8.2E-34 T 06-07-2017 IPR023214 HAD-like domain AM402_RS02155 e6afa227efa1e9f454ef187e47c4e717 270 Gene3D G3DSA:3.40.50.1000 104 259 8.2E-34 T 06-07-2017 IPR023214 HAD-like domain AM402_RS02155 e6afa227efa1e9f454ef187e47c4e717 270 Gene3D G3DSA:1.10.150.240 24 99 3.9E-30 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AM402_RS15425 2b65246bfe2b51e079406b62ea95660c 225 SUPERFAMILY SSF52540 6 222 9.02E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15425 2b65246bfe2b51e079406b62ea95660c 225 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.744 T 06-07-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AM402_RS15425 2b65246bfe2b51e079406b62ea95660c 225 Pfam PF02224 Cytidylate kinase 8 221 3.0E-80 T 06-07-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AM402_RS15425 2b65246bfe2b51e079406b62ea95660c 225 Gene3D G3DSA:3.40.50.300 6 221 3.8E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15425 2b65246bfe2b51e079406b62ea95660c 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 8.1E-91 T 06-07-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 SUPERFAMILY SSF53850 88 291 1.52E-39 T 06-07-2017 AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 Gene3D G3DSA:3.40.190.10 175 263 2.5E-24 T 06-07-2017 AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 Gene3D G3DSA:3.40.190.10 90 174 1.3E-16 T 06-07-2017 AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 SUPERFAMILY SSF46785 1 86 2.3E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.5E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 Gene3D G3DSA:1.10.10.10 1 84 6.7E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14465 590ae415436a5ab9f01a10d5e7c06874 297 Pfam PF03466 LysR substrate binding domain 88 287 6.7E-43 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 Gene3D G3DSA:3.30.830.10 27 254 5.5E-39 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 Gene3D G3DSA:3.30.830.10 516 722 3.2E-12 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 Gene3D G3DSA:3.30.830.10 343 468 1.0E-8 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 SUPERFAMILY SSF63411 758 924 1.2E-20 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 SUPERFAMILY SSF63411 519 729 1.25E-16 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 Gene3D G3DSA:3.30.830.10 757 920 2.7E-15 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 Pfam PF00675 Insulinase (Peptidase family M16) 53 166 9.1E-22 T 06-07-2017 IPR011765 Peptidase M16, N-terminal AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 Pfam PF05193 Peptidase M16 inactive domain 698 861 3.9E-14 T 06-07-2017 IPR007863 Peptidase M16, C-terminal AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 Pfam PF05193 Peptidase M16 inactive domain 208 389 4.0E-11 T 06-07-2017 IPR007863 Peptidase M16, C-terminal AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 SUPERFAMILY SSF63411 322 469 3.83E-10 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS19485 fa61494f4efef64c71109d1788e1dbb3 932 SUPERFAMILY SSF63411 34 249 1.03E-41 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS03325 0233fc8d7d5438bf75349a8789dc858c 106 SUPERFAMILY SSF47413 48 96 8.04E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS03325 0233fc8d7d5438bf75349a8789dc858c 106 Gene3D G3DSA:1.10.260.40 51 101 5.6E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS03325 0233fc8d7d5438bf75349a8789dc858c 106 Pfam PF01381 Helix-turn-helix 53 95 1.5E-9 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS03325 0233fc8d7d5438bf75349a8789dc858c 106 SMART SM00530 52 106 9.4E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS00735 b61ba175155c12d53558c4b0eebc2a23 616 SUPERFAMILY SSF52016 421 610 2.82E-59 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM402_RS00735 b61ba175155c12d53558c4b0eebc2a23 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 2.1E-264 T 06-07-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM402_RS00735 b61ba175155c12d53558c4b0eebc2a23 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.824 T 06-07-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM402_RS00735 b61ba175155c12d53558c4b0eebc2a23 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 06-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM402_RS00735 b61ba175155c12d53558c4b0eebc2a23 616 SUPERFAMILY SSF143975 3 420 2.88E-132 T 06-07-2017 AM402_RS00735 b61ba175155c12d53558c4b0eebc2a23 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 06-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM402_RS00735 b61ba175155c12d53558c4b0eebc2a23 616 Pfam PF00920 Dehydratase family 34 607 3.7E-216 T 06-07-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM402_RS06510 66707c676283e6facbe79c91e88fd6fd 374 SUPERFAMILY SSF51261 129 371 1.1E-51 T 06-07-2017 IPR011055 Duplicated hybrid motif AM402_RS06510 66707c676283e6facbe79c91e88fd6fd 374 Gene3D G3DSA:2.70.70.10 235 372 1.1E-40 T 06-07-2017 AM402_RS06510 66707c676283e6facbe79c91e88fd6fd 374 Pfam PF01476 LysM domain 130 172 6.5E-10 T 06-07-2017 IPR018392 LysM domain AM402_RS06510 66707c676283e6facbe79c91e88fd6fd 374 Pfam PF01551 Peptidase family M23 274 367 2.2E-30 T 06-07-2017 IPR016047 Peptidase M23 AM402_RS06510 66707c676283e6facbe79c91e88fd6fd 374 Gene3D G3DSA:3.10.350.10 128 172 5.0E-13 T 06-07-2017 IPR018392 LysM domain AM402_RS06510 66707c676283e6facbe79c91e88fd6fd 374 SMART SM00257 129 173 7.4E-12 T 06-07-2017 IPR018392 LysM domain AM402_RS00420 7067d6ba66ec13a32b62eb57aa57e814 384 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 13 353 3.4E-149 T 06-07-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM402_RS00420 7067d6ba66ec13a32b62eb57aa57e814 384 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS00420 7067d6ba66ec13a32b62eb57aa57e814 384 Pfam PF08331 Domain of unknown function (DUF1730) 61 145 1.4E-24 T 06-07-2017 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AM402_RS00420 7067d6ba66ec13a32b62eb57aa57e814 384 SUPERFAMILY SSF46548 144 261 1.41E-19 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS00420 7067d6ba66ec13a32b62eb57aa57e814 384 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 6 320 50.295 T 06-07-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM402_RS00420 7067d6ba66ec13a32b62eb57aa57e814 384 Gene3D G3DSA:3.30.70.20 195 264 4.5E-7 T 06-07-2017 AM402_RS00420 7067d6ba66ec13a32b62eb57aa57e814 384 Pfam PF13484 4Fe-4S double cluster binding domain 197 261 2.6E-19 T 06-07-2017 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 Pfam PF00593 TonB dependent receptor 748 1015 5.2E-20 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 153 1.7E-7 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 Gene3D G3DSA:2.40.170.20 316 536 7.0E-68 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 Gene3D G3DSA:2.40.170.20 238 269 7.0E-68 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 Gene3D G3DSA:2.40.170.20 724 1017 7.0E-68 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 SUPERFAMILY SSF56935 232 278 2.22E-51 T 06-07-2017 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 SUPERFAMILY SSF56935 66 194 2.22E-51 T 06-07-2017 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 SUPERFAMILY SSF56935 735 1017 2.22E-51 T 06-07-2017 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 SUPERFAMILY SSF56935 320 535 2.22E-51 T 06-07-2017 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 Gene3D G3DSA:2.170.130.10 66 177 4.9E-21 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS01955 1a94bb719326d6661d34daf68473f0c9 1017 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 1000 1017 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site AM402_RS05165 ac349961c1836051a75bd129e5ef7da5 545 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 306 4.2E-100 T 06-07-2017 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AM402_RS05165 ac349961c1836051a75bd129e5ef7da5 545 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 2.7E-102 T 06-07-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM402_RS05165 ac349961c1836051a75bd129e5ef7da5 545 Pfam PF02690 Na+/Pi-cotransporter 158 248 1.7E-8 T 06-07-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM402_RS05165 ac349961c1836051a75bd129e5ef7da5 545 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.2E-34 T 06-07-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM402_RS05165 ac349961c1836051a75bd129e5ef7da5 545 SUPERFAMILY SSF109755 320 530 6.02E-21 T 06-07-2017 AM402_RS05165 ac349961c1836051a75bd129e5ef7da5 545 Gene3D G3DSA:1.20.58.220 327 412 7.6E-4 T 06-07-2017 AM402_RS06380 3a99a3408c95c7020b7b4138a8159f45 188 PIRSF PIRSF004682 1 188 6.9E-69 T 06-07-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM402_RS06380 3a99a3408c95c7020b7b4138a8159f45 188 SUPERFAMILY SSF56784 3 185 1.01E-53 T 06-07-2017 IPR023214 HAD-like domain AM402_RS06380 3a99a3408c95c7020b7b4138a8159f45 188 Pfam PF13242 HAD-hyrolase-like 109 179 5.2E-13 T 06-07-2017 AM402_RS06380 3a99a3408c95c7020b7b4138a8159f45 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 155 8.1E-40 T 06-07-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM402_RS06380 3a99a3408c95c7020b7b4138a8159f45 188 Gene3D G3DSA:3.40.50.1000 3 183 6.3E-65 T 06-07-2017 IPR023214 HAD-like domain AM402_RS06380 3a99a3408c95c7020b7b4138a8159f45 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 3.8E-88 T 06-07-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM402_RS06380 3a99a3408c95c7020b7b4138a8159f45 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 7 153 3.9E-38 T 06-07-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 5.4E-51 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 5.4E-51 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 5.4E-51 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 5.4E-51 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 5.4E-51 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 5.4E-51 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 5.4E-51 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 SUPERFAMILY SSF51735 4 167 1.02E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 SUPERFAMILY SSF56327 173 443 1.63E-76 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 3.8E-75 T 06-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 1.7E-35 T 06-07-2017 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 Gene3D G3DSA:3.40.50.720 4 168 3.8E-72 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 Gene3D G3DSA:3.90.110.10 170 439 3.1E-84 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM402_RS02880 9e1fed01a9f3773919ba847133e0a039 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 06-07-2017 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AM402_RS13500 6a3e2c7be12a313e1ac085eba8a73bc7 230 SUPERFAMILY SSF48657 5 119 1.44E-38 T 06-07-2017 IPR016103 ProQ/FinO domain AM402_RS13500 6a3e2c7be12a313e1ac085eba8a73bc7 230 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 230 29.239 T 06-07-2017 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AM402_RS13500 6a3e2c7be12a313e1ac085eba8a73bc7 230 Pfam PF04352 ProQ/FINO family 8 115 9.7E-42 T 06-07-2017 IPR016103 ProQ/FinO domain AM402_RS13500 6a3e2c7be12a313e1ac085eba8a73bc7 230 Gene3D G3DSA:1.10.1710.10 25 108 6.1E-35 T 06-07-2017 IPR016103 ProQ/FinO domain AM402_RS13500 6a3e2c7be12a313e1ac085eba8a73bc7 230 SMART SM00945 5 119 1.7E-59 T 06-07-2017 IPR016103 ProQ/FinO domain AM402_RS21195 72cdd57322883e2849510a29101083d2 132 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 128 3.2E-54 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS21195 72cdd57322883e2849510a29101083d2 132 SUPERFAMILY SSF50249 4 124 7.54E-54 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS21195 72cdd57322883e2849510a29101083d2 132 PIRSF PIRSF002070 2 132 5.3E-40 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS21195 72cdd57322883e2849510a29101083d2 132 Pfam PF00436 Single-strand binding protein family 6 112 2.5E-44 T 06-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM402_RS21195 72cdd57322883e2849510a29101083d2 132 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.766 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS21195 72cdd57322883e2849510a29101083d2 132 Gene3D G3DSA:2.40.50.140 4 131 1.5E-57 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS07440 a33997792a00d68f691d90537bb3a628 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 28 383 4.4E-133 T 06-07-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AM402_RS07440 a33997792a00d68f691d90537bb3a628 397 Pfam PF01098 Cell cycle protein 30 385 2.6E-123 T 06-07-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AM402_RS07440 a33997792a00d68f691d90537bb3a628 397 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 26 393 41.25 T 06-07-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AM402_RS07440 a33997792a00d68f691d90537bb3a628 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 342 366 - T 06-07-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 544 0.0092 T 06-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 177 332 1.4E-46 T 06-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Gene3D G3DSA:3.30.413.10 154 343 4.5E-70 T 06-07-2017 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Gene3D G3DSA:3.30.413.10 436 567 1.6E-30 T 06-07-2017 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Gene3D G3DSA:3.90.480.10 78 150 7.8E-61 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Gene3D G3DSA:3.90.480.10 346 427 7.8E-61 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 357 421 4.5E-13 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 142 7.4E-12 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 23 563 4.6E-284 T 06-07-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 PRINTS PR00397 Sirohaem Fe-binding site signature 434 452 1.2E-8 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 PRINTS PR00397 Sirohaem Fe-binding site signature 482 500 1.2E-8 T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 SUPERFAMILY SSF55124 350 427 5.98E-20 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 SUPERFAMILY SSF56014 154 348 1.26E-58 T 06-07-2017 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 SUPERFAMILY SSF56014 432 565 1.83E-32 T 06-07-2017 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 482 498 - T 06-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 14 575 57.038 T 06-07-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06450 d1e5e982eff72d69b9229bf91a733a3b 580 SUPERFAMILY SSF55124 12 146 1.39E-25 T 06-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS11060 c78bd98e9c981c33a21cb37d19e2c545 296 Pfam PF01256 Carbohydrate kinase 33 277 5.2E-51 T 06-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM402_RS11060 c78bd98e9c981c33a21cb37d19e2c545 296 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 20 280 2.0E-55 T 06-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM402_RS11060 c78bd98e9c981c33a21cb37d19e2c545 296 SUPERFAMILY SSF53613 20 283 2.18E-62 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS11060 c78bd98e9c981c33a21cb37d19e2c545 296 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 220 230 - T 06-07-2017 IPR017953 Carbohydrate kinase, predicted, conserved site AM402_RS11060 c78bd98e9c981c33a21cb37d19e2c545 296 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 9 286 19.426 T 06-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM402_RS11060 c78bd98e9c981c33a21cb37d19e2c545 296 Gene3D G3DSA:3.40.1190.20 19 284 4.8E-74 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS00305 d4f03fdd0784d9f95417b1795c4c2a1e 246 Gene3D G3DSA:3.40.190.80 149 243 4.2E-39 T 06-07-2017 AM402_RS00305 d4f03fdd0784d9f95417b1795c4c2a1e 246 Gene3D G3DSA:3.30.540.10 1 148 5.4E-44 T 06-07-2017 AM402_RS00305 d4f03fdd0784d9f95417b1795c4c2a1e 246 Pfam PF00459 Inositol monophosphatase family 5 236 6.6E-53 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AM402_RS00305 d4f03fdd0784d9f95417b1795c4c2a1e 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 06-07-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AM402_RS00305 d4f03fdd0784d9f95417b1795c4c2a1e 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 06-07-2017 IPR020583 Inositol monophosphatase, metal-binding site AM402_RS00305 d4f03fdd0784d9f95417b1795c4c2a1e 246 SUPERFAMILY SSF56655 1 243 1.22E-74 T 06-07-2017 AM402_RS00305 d4f03fdd0784d9f95417b1795c4c2a1e 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 9.8E-101 T 06-07-2017 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 Pfam PF07729 FCD domain 108 221 1.3E-17 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 Gene3D G3DSA:1.20.120.530 109 220 3.6E-14 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 SMART SM00345 18 77 3.4E-16 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 Gene3D G3DSA:1.10.10.10 3 79 1.4E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 SUPERFAMILY SSF46785 10 81 5.8E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.5E-8 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.5E-8 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 SUPERFAMILY SSF48008 109 222 8.11E-18 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 3.1E-16 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS02370 d659fca0c85fc1d182f0ff7332d30b73 228 SMART SM00895 106 227 6.5E-15 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 Pfam PF00676 Dehydrogenase E1 component 219 508 4.2E-49 T 06-07-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 Gene3D G3DSA:3.40.50.970 592 794 1.1E-24 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 Gene3D G3DSA:3.40.50.970 161 548 6.8E-78 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 4.7E-17 T 06-07-2017 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 789 931 1.9E-53 T 06-07-2017 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 SMART SM00861 592 785 4.0E-62 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 SUPERFAMILY SSF52518 575 792 2.85E-51 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 931 0.0 T 06-07-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 SUPERFAMILY SSF52518 119 551 2.87E-86 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 PIRSF PIRSF000157 1 933 0.0 T 06-07-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM402_RS16175 613f56ddd7ac41300d0b7ad6907444a2 934 Pfam PF02779 Transketolase, pyrimidine binding domain 592 786 3.7E-65 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AM402_RS04440 c1e871a5c361d6bbf1381a0ccd6ca688 94 SUPERFAMILY SSF54862 39 86 2.15E-9 T 06-07-2017 AM402_RS04440 c1e871a5c361d6bbf1381a0ccd6ca688 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS04440 c1e871a5c361d6bbf1381a0ccd6ca688 94 PIRSF PIRSF036548 1 94 7.8E-36 T 06-07-2017 IPR012206 Ferredoxin-like, FixX GO:0005506 AM402_RS04440 c1e871a5c361d6bbf1381a0ccd6ca688 94 Gene3D G3DSA:3.30.70.20 39 75 2.3E-6 T 06-07-2017 AM402_RS05455 86262159d48ec6142f70ec73312dce4d 338 Pfam PF09588 YqaJ-like viral recombinase domain 13 147 9.9E-20 T 06-07-2017 IPR019080 YqaJ viral recombinase AM402_RS05455 86262159d48ec6142f70ec73312dce4d 338 SUPERFAMILY SSF52980 1 199 5.9E-49 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM402_RS05455 86262159d48ec6142f70ec73312dce4d 338 Gene3D G3DSA:3.90.320.10 1 199 7.9E-41 T 06-07-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AM402_RS05455 86262159d48ec6142f70ec73312dce4d 338 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 5 158 9.3E-42 T 06-07-2017 IPR017482 Putative phage-type endonuclease AM402_RS21150 58d93e5e36b01ec54cac8f31f4a23bca 245 SMART SM00857 13 166 3.5E-31 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM402_RS21150 58d93e5e36b01ec54cac8f31f4a23bca 245 ProSitePatterns PS00398 Site-specific recombinases signature 2. 71 83 - T 06-07-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM402_RS21150 58d93e5e36b01ec54cac8f31f4a23bca 245 Pfam PF02796 Helix-turn-helix domain of resolvase 173 209 3.1E-5 T 06-07-2017 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM402_RS21150 58d93e5e36b01ec54cac8f31f4a23bca 245 Pfam PF00239 Resolvase, N terminal domain 13 166 4.2E-26 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM402_RS21150 58d93e5e36b01ec54cac8f31f4a23bca 245 Gene3D G3DSA:3.40.50.1390 15 106 4.3E-30 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM402_RS21150 58d93e5e36b01ec54cac8f31f4a23bca 245 ProSitePatterns PS00397 Site-specific recombinases active site. 16 24 - T 06-07-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM402_RS21150 58d93e5e36b01ec54cac8f31f4a23bca 245 SUPERFAMILY SSF53041 11 166 3.27E-27 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM402_RS08090 0f3433aea53ce79a5e7afe0633bfcf30 305 Pfam PF01545 Cation efflux family 30 223 1.2E-44 T 06-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM402_RS08090 0f3433aea53ce79a5e7afe0633bfcf30 305 Gene3D G3DSA:3.30.70.1350 224 305 2.0E-25 T 06-07-2017 IPR027470 Cation efflux protein, cytoplasmic domain AM402_RS08090 0f3433aea53ce79a5e7afe0633bfcf30 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 26 304 6.3E-69 T 06-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM402_RS08090 0f3433aea53ce79a5e7afe0633bfcf30 305 SUPERFAMILY SSF160240 227 304 1.44E-21 T 06-07-2017 AM402_RS08090 0f3433aea53ce79a5e7afe0633bfcf30 305 Pfam PF16916 Dimerisation domain of Zinc Transporter 228 305 6.0E-24 T 06-07-2017 IPR027470 Cation efflux protein, cytoplasmic domain AM402_RS08090 0f3433aea53ce79a5e7afe0633bfcf30 305 Gene3D G3DSA:1.20.1510.10 26 223 3.4E-45 T 06-07-2017 IPR027469 Cation efflux protein transmembrane domain AM402_RS08090 0f3433aea53ce79a5e7afe0633bfcf30 305 SUPERFAMILY SSF161111 23 224 1.96E-54 T 06-07-2017 AM402_RS02175 f8f3576c2275b96fc7100e4d7216ab96 335 PIRSF PIRSF002825 8 330 1.6E-93 T 06-07-2017 IPR026045 Ferric binding protein AM402_RS02175 f8f3576c2275b96fc7100e4d7216ab96 335 Gene3D G3DSA:3.40.190.10 3 121 2.8E-40 T 06-07-2017 AM402_RS02175 f8f3576c2275b96fc7100e4d7216ab96 335 Gene3D G3DSA:3.40.190.10 262 321 2.8E-40 T 06-07-2017 AM402_RS02175 f8f3576c2275b96fc7100e4d7216ab96 335 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 3.4E-161 T 06-07-2017 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative AM402_RS02175 f8f3576c2275b96fc7100e4d7216ab96 335 Pfam PF13343 Bacterial extracellular solute-binding protein 72 311 1.5E-31 T 06-07-2017 AM402_RS02175 f8f3576c2275b96fc7100e4d7216ab96 335 Gene3D G3DSA:3.40.190.10 124 261 1.3E-44 T 06-07-2017 AM402_RS02175 f8f3576c2275b96fc7100e4d7216ab96 335 SUPERFAMILY SSF53850 23 327 3.07E-73 T 06-07-2017 AM402_RS01840 4af09b35a7ac6a3ee178395e0c16095a 127 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 5 115 2.0E-24 T 06-07-2017 IPR006440 Death on curing protein GO:0016301 AM402_RS01840 4af09b35a7ac6a3ee178395e0c16095a 127 SUPERFAMILY SSF140931 6 91 3.92E-6 T 06-07-2017 IPR003812 Fido domain AM402_RS01840 4af09b35a7ac6a3ee178395e0c16095a 127 PIRSF PIRSF018297 1 127 1.0E-37 T 06-07-2017 IPR006440 Death on curing protein GO:0016301 AM402_RS01840 4af09b35a7ac6a3ee178395e0c16095a 127 Pfam PF02661 Fic/DOC family 3 84 1.1E-8 T 06-07-2017 IPR003812 Fido domain AM402_RS07080 e971e34138f1303063dbd77413b4111d 284 PIRSF PIRSF001359 1 284 1.5E-111 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS07080 e971e34138f1303063dbd77413b4111d 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS07080 e971e34138f1303063dbd77413b4111d 284 Gene3D G3DSA:3.20.20.70 1 284 1.4E-111 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS07080 e971e34138f1303063dbd77413b4111d 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 3.6E-105 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS07080 e971e34138f1303063dbd77413b4111d 284 SUPERFAMILY SSF51569 1 283 4.83E-99 T 06-07-2017 AM402_RS07080 e971e34138f1303063dbd77413b4111d 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS07080 e971e34138f1303063dbd77413b4111d 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 3.4E-99 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS07080 e971e34138f1303063dbd77413b4111d 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 1.9E-151 T 06-07-2017 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AM402_RS14615 fa726b158512c54402690a8603b15818 395 Pfam PF04865 Baseplate J-like protein 78 200 9.1E-9 T 06-07-2017 IPR006949 Baseplate protein J-like AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 47.422 T 06-07-2017 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 Gene3D G3DSA:1.10.530.10 286 458 3.0E-39 T 06-07-2017 AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 Gene3D G3DSA:3.40.190.10 121 219 4.5E-5 T 06-07-2017 AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 Pfam PF01464 Transglycosylase SLT domain 297 401 2.0E-23 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 SMART SM00062 44 268 1.0E-35 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 SUPERFAMILY SSF53955 245 422 8.63E-38 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 SUPERFAMILY SSF53850 45 267 2.76E-36 T 06-07-2017 AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 Gene3D G3DSA:3.40.190.10 42 120 5.5E-14 T 06-07-2017 AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 Gene3D G3DSA:3.40.190.10 229 268 5.5E-14 T 06-07-2017 AM402_RS08485 a0ee3255c07562111b776d2ba4c71222 489 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 267 4.4E-31 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 942 25.707 T 06-07-2017 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 713 802 1.0E-24 T 06-07-2017 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 SMART SM00387 581 692 9.0E-37 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Gene3D G3DSA:3.30.565.10 541 690 2.2E-43 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 SMART SM00448 826 937 1.6E-35 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Gene3D G3DSA:1.10.287.130 473 530 1.7E-18 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Gene3D G3DSA:3.40.50.2300 825 939 1.5E-37 T 06-07-2017 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Gene3D G3DSA:3.30.450.20 427 472 1.7E-5 T 06-07-2017 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 2.1E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 2.1E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 2.1E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 2.1E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Pfam PF00072 Response regulator receiver domain 828 935 1.4E-29 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 SMART SM00388 469 534 9.4E-22 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 SUPERFAMILY SSF55874 523 690 3.01E-44 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 SUPERFAMILY SSF52172 705 819 1.09E-30 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 SUPERFAMILY SSF47384 453 535 3.34E-21 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 SUPERFAMILY SSF52172 826 941 6.55E-37 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 533 5.5E-19 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09270 e6b3afbb017d21af7ecbd82d39c3fa06 942 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 8.6E-26 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09085 42a8f136e3d980270c353376e52ee5e5 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 183 1.9E-12 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS09085 42a8f136e3d980270c353376e52ee5e5 220 Gene3D G3DSA:1.10.150.240 21 63 7.3E-5 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AM402_RS09085 42a8f136e3d980270c353376e52ee5e5 220 SUPERFAMILY SSF56784 6 205 7.05E-42 T 06-07-2017 IPR023214 HAD-like domain AM402_RS09085 42a8f136e3d980270c353376e52ee5e5 220 Gene3D G3DSA:3.40.50.1000 64 213 1.8E-43 T 06-07-2017 IPR023214 HAD-like domain AM402_RS09085 42a8f136e3d980270c353376e52ee5e5 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 183 2.1E-24 T 06-07-2017 IPR023214 HAD-like domain AM402_RS01550 4f03801051fafe248afff6a567a0462e 326 SUPERFAMILY SSF56349 61 311 3.3E-43 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS01550 4f03801051fafe248afff6a567a0462e 326 Gene3D G3DSA:1.10.443.10 163 315 3.1E-34 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS01550 4f03801051fafe248afff6a567a0462e 326 Pfam PF00589 Phage integrase family 164 307 1.6E-15 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS12725 66cda033b627a1780d36d82d8e9f2349 341 Gene3D G3DSA:3.40.50.720 154 270 2.4E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12725 66cda033b627a1780d36d82d8e9f2349 341 SUPERFAMILY SSF50129 11 158 2.04E-33 T 06-07-2017 IPR011032 GroES-like AM402_RS12725 66cda033b627a1780d36d82d8e9f2349 341 Pfam PF00107 Zinc-binding dehydrogenase 160 279 7.7E-31 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM402_RS12725 66cda033b627a1780d36d82d8e9f2349 341 Gene3D G3DSA:3.90.180.10 10 153 2.5E-43 T 06-07-2017 IPR011032 GroES-like AM402_RS12725 66cda033b627a1780d36d82d8e9f2349 341 SUPERFAMILY SSF51735 120 298 3.71E-53 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12725 66cda033b627a1780d36d82d8e9f2349 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 113 5.2E-11 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM402_RS12725 66cda033b627a1780d36d82d8e9f2349 341 SMART SM00829 20 332 5.4E-57 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM402_RS12725 66cda033b627a1780d36d82d8e9f2349 341 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 333 1.8E-141 T 06-07-2017 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AM402_RS10510 fddd815ff8a92d558d7d931e0d6b5d37 173 Pfam PF01797 Transposase IS200 like 13 130 3.2E-38 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS10510 fddd815ff8a92d558d7d931e0d6b5d37 173 SUPERFAMILY SSF143422 7 131 6.15E-46 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS10510 fddd815ff8a92d558d7d931e0d6b5d37 173 SMART SM01321 12 130 8.7E-44 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS10510 fddd815ff8a92d558d7d931e0d6b5d37 173 Gene3D G3DSA:3.30.70.1290 4 133 3.0E-55 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS13010 282f6d3db5ad3b253c37de100ea8d800 442 SUPERFAMILY SSF54106 98 141 9.16E-5 T 06-07-2017 IPR018392 LysM domain AM402_RS13010 282f6d3db5ad3b253c37de100ea8d800 442 Pfam PF04225 Opacity-associated protein A LysM-like domain 98 172 4.5E-5 T 06-07-2017 IPR007340 Opacity-associated protein A AM402_RS13010 282f6d3db5ad3b253c37de100ea8d800 442 SUPERFAMILY SSF51261 166 409 7.32E-68 T 06-07-2017 IPR011055 Duplicated hybrid motif AM402_RS13010 282f6d3db5ad3b253c37de100ea8d800 442 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 38 2.0E-6 T 06-07-2017 IPR013731 Opacity-associated protein A, N-terminal AM402_RS13010 282f6d3db5ad3b253c37de100ea8d800 442 Gene3D G3DSA:2.70.70.10 269 410 1.4E-48 T 06-07-2017 AM402_RS13010 282f6d3db5ad3b253c37de100ea8d800 442 Pfam PF01551 Peptidase family M23 314 408 1.7E-33 T 06-07-2017 IPR016047 Peptidase M23 AM402_RS13010 282f6d3db5ad3b253c37de100ea8d800 442 SMART SM00257 99 144 1.5E-7 T 06-07-2017 IPR018392 LysM domain AM402_RS13010 282f6d3db5ad3b253c37de100ea8d800 442 Gene3D G3DSA:3.10.350.10 99 141 2.7E-7 T 06-07-2017 IPR018392 LysM domain AM402_RS00740 d2583b9dc526da6569add3aca6c06016 308 Gene3D G3DSA:3.30.470.10 6 129 2.6E-44 T 06-07-2017 AM402_RS00740 d2583b9dc526da6569add3aca6c06016 308 Gene3D G3DSA:3.20.10.10 133 294 3.2E-56 T 06-07-2017 AM402_RS00740 d2583b9dc526da6569add3aca6c06016 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 06-07-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM402_RS00740 d2583b9dc526da6569add3aca6c06016 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 8.8E-144 T 06-07-2017 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 AM402_RS00740 d2583b9dc526da6569add3aca6c06016 308 SUPERFAMILY SSF56752 6 306 1.57E-104 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM402_RS00740 d2583b9dc526da6569add3aca6c06016 308 Pfam PF01063 Amino-transferase class IV 35 267 2.7E-48 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 06-07-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.1E-33 T 06-07-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 SMART SM01383 42 118 1.4E-48 T 06-07-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 Gene3D G3DSA:2.40.50.140 1 114 2.5E-51 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 3.0E-131 T 06-07-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 Gene3D G3DSA:4.10.950.10 196 272 2.5E-34 T 06-07-2017 IPR014726 Ribosomal protein L2, domain 3 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 4.8E-57 T 06-07-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 Gene3D G3DSA:2.30.30.30 119 195 1.6E-35 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 SUPERFAMILY SSF50104 127 269 3.19E-60 T 06-07-2017 IPR008991 Translation protein SH3-like domain AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 SUPERFAMILY SSF50249 2 125 2.64E-50 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 PIRSF PIRSF002158 12 274 7.5E-101 T 06-07-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 SMART SM01382 124 251 5.2E-92 T 06-07-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM402_RS00990 81c61ac40a690d1f34af18b832c2af6a 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.991 T 06-07-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS20700 461ea0e3422352f339d60f148d5d0310 817 Gene3D G3DSA:3.40.50.620 40 256 2.0E-10 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS20700 461ea0e3422352f339d60f148d5d0310 817 SUPERFAMILY SSF52402 47 255 5.08E-9 T 06-07-2017 AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 Gene3D G3DSA:3.40.50.790 69 159 4.7E-41 T 06-07-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.3E-51 T 06-07-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.308 T 06-07-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 Gene3D G3DSA:3.30.190.20 161 225 1.4E-46 T 06-07-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 Gene3D G3DSA:3.30.190.20 19 68 1.4E-46 T 06-07-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 SUPERFAMILY SSF56808 6 225 1.29E-81 T 06-07-2017 IPR023674 Ribosomal protein L1-like AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 06-07-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 9.9E-107 T 06-07-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM402_RS03665 7ba8bac0352499c0cb7bf2816f0c5ede 233 PIRSF PIRSF002155 1 227 1.6E-79 T 06-07-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS09680 adfbb54d635fc411a607402adc6d2eb7 146 SUPERFAMILY SSF140566 1 120 1.11E-17 T 06-07-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AM402_RS09680 adfbb54d635fc411a607402adc6d2eb7 146 Pfam PF05130 FlgN protein 2 135 1.3E-28 T 06-07-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AM402_RS09680 adfbb54d635fc411a607402adc6d2eb7 146 Gene3D G3DSA:1.20.58.300 1 120 1.8E-13 T 06-07-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 4.7E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 4.7E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 4.7E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 SUPERFAMILY SSF46785 17 93 2.9E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 310 1.0E-150 T 06-07-2017 IPR011781 D-serine deaminase transcriptional activator AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 2.2E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 Pfam PF03466 LysR substrate binding domain 101 309 1.3E-27 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 Gene3D G3DSA:1.10.10.10 12 95 2.3E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 Gene3D G3DSA:3.40.190.10 105 205 2.4E-29 T 06-07-2017 AM402_RS18545 8a66641bb6c02d76b5ba08fa73ed652f 314 SUPERFAMILY SSF53850 101 310 5.25E-29 T 06-07-2017 AM402_RS06190 0b94e051eae109733b2805bf81a86129 281 Gene3D G3DSA:3.30.1130.10 21 137 1.6E-41 T 06-07-2017 AM402_RS06190 0b94e051eae109733b2805bf81a86129 281 SUPERFAMILY SSF55620 166 265 1.26E-10 T 06-07-2017 AM402_RS06190 0b94e051eae109733b2805bf81a86129 281 Gene3D G3DSA:3.30.1130.10 147 281 1.2E-54 T 06-07-2017 AM402_RS06190 0b94e051eae109733b2805bf81a86129 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 3.3E-126 T 06-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM402_RS06190 0b94e051eae109733b2805bf81a86129 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 159.745 T 06-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM402_RS06190 0b94e051eae109733b2805bf81a86129 281 PIRSF PIRSF004750 6 281 5.7E-125 T 06-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM402_RS06190 0b94e051eae109733b2805bf81a86129 281 Pfam PF14489 QueF-like protein 195 269 1.1E-26 T 06-07-2017 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM402_RS06190 0b94e051eae109733b2805bf81a86129 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 1.8E-46 T 06-07-2017 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM402_RS20020 af5ed029b549682c199f1d935961eece 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 283 2.7E-15 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS20020 af5ed029b549682c199f1d935961eece 379 SUPERFAMILY SSF111369 57 291 9.15E-82 T 06-07-2017 AM402_RS20020 af5ed029b549682c199f1d935961eece 379 Gene3D G3DSA:2.40.50.100 71 103 2.4E-22 T 06-07-2017 AM402_RS20020 af5ed029b549682c199f1d935961eece 379 Gene3D G3DSA:2.40.50.100 164 198 2.4E-22 T 06-07-2017 AM402_RS20020 af5ed029b549682c199f1d935961eece 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 366 8.7E-72 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 927 21.491 T 06-07-2017 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 842 1.3E-302 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 SUPERFAMILY SSF47323 651 927 8.04E-80 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 1.4E-231 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 525 538 6.1E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 237 260 6.1E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 560 569 6.1E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 6.1E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 400 415 6.1E-32 T 06-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 Gene3D G3DSA:1.10.730.10 641 788 8.9E-45 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 Gene3D G3DSA:3.90.740.10 206 388 1.2E-56 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 SUPERFAMILY SSF52374 3 202 2.48E-136 T 06-07-2017 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 SUPERFAMILY SSF52374 402 646 2.48E-136 T 06-07-2017 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 Gene3D G3DSA:3.40.50.620 14 200 6.1E-136 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 Gene3D G3DSA:3.40.50.620 405 635 6.1E-136 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 Pfam PF06827 Zinc finger found in FPG and IleRS 896 924 2.1E-9 T 06-07-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 Pfam PF08264 Anticodon-binding domain of tRNA 684 839 5.8E-31 T 06-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM402_RS19335 f3370195a3735bfab7f6dd4690f3eb9b 936 SUPERFAMILY SSF50677 204 402 2.41E-56 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 SMART SM00863 653 696 1.3E-21 T 06-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 Pfam PF02272 DHHA1 domain 801 869 2.4E-16 T 06-07-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 SUPERFAMILY SSF50447 456 552 3.53E-18 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS17140 524525c46ee9e28d99160686976a051d 875 Gene3D G3DSA:3.30.980.10 562 621 2.7E-4 T 06-07-2017 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 Gene3D G3DSA:3.30.980.10 672 687 2.7E-4 T 06-07-2017 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 Pfam PF01411 tRNA synthetases class II (A) 7 554 2.6E-233 T 06-07-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 1.4E-17 T 06-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 SUPERFAMILY SSF55681 4 255 3.98E-108 T 06-07-2017 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 204.864 T 06-07-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 SUPERFAMILY SSF55186 552 708 3.92E-52 T 06-07-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.9E-32 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.9E-32 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.9E-32 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.9E-32 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.9E-32 T 06-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 Gene3D G3DSA:3.30.930.10 4 251 2.0E-126 T 06-07-2017 AM402_RS17140 524525c46ee9e28d99160686976a051d 875 SUPERFAMILY SSF101353 256 465 3.01E-61 T 06-07-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AM402_RS21165 11ae040c5a7a17783c049145e9163d69 168 Gene3D G3DSA:3.40.50.270 5 142 2.0E-40 T 06-07-2017 AM402_RS21165 11ae040c5a7a17783c049145e9163d69 168 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 141 3.0E-16 T 06-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM402_RS21165 11ae040c5a7a17783c049145e9163d69 168 SMART SM00226 6 144 2.1E-33 T 06-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM402_RS21165 11ae040c5a7a17783c049145e9163d69 168 SUPERFAMILY SSF52788 6 144 7.72E-42 T 06-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM402_RS19440 c6465545979dbb5011a8be8c5aea6a5f 639 Gene3D G3DSA:1.10.530.10 469 633 2.0E-51 T 06-07-2017 AM402_RS19440 c6465545979dbb5011a8be8c5aea6a5f 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 401 466 9.9E-23 T 06-07-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM402_RS19440 c6465545979dbb5011a8be8c5aea6a5f 639 SUPERFAMILY SSF48435 24 471 3.01E-125 T 06-07-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AM402_RS19440 c6465545979dbb5011a8be8c5aea6a5f 639 Gene3D G3DSA:1.10.1240.20 400 466 1.5E-26 T 06-07-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM402_RS19440 c6465545979dbb5011a8be8c5aea6a5f 639 Pfam PF01464 Transglycosylase SLT domain 479 591 5.4E-31 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS19440 c6465545979dbb5011a8be8c5aea6a5f 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM402_RS19440 c6465545979dbb5011a8be8c5aea6a5f 639 Gene3D G3DSA:1.25.20.10 25 385 9.5E-114 T 06-07-2017 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AM402_RS19440 c6465545979dbb5011a8be8c5aea6a5f 639 SUPERFAMILY SSF53955 473 635 1.97E-48 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 42.822 T 06-07-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 Gene3D G3DSA:3.40.50.720 20 107 1.2E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 Pfam PF01225 Mur ligase family, catalytic domain 21 119 1.2E-29 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 Gene3D G3DSA:3.90.190.20 326 477 1.8E-56 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 6.0E-21 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 Pfam PF08245 Mur ligase middle domain 124 304 2.0E-26 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 Gene3D G3DSA:3.40.1190.10 108 325 5.0E-79 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 1.1E-178 T 06-07-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 SUPERFAMILY SSF53623 105 322 8.63E-71 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 SUPERFAMILY SSF53244 323 477 5.49E-47 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07450 a073f9522ca5d6cdb5ffa27a09b0dce6 487 SUPERFAMILY SSF51984 20 106 1.83E-28 T 06-07-2017 AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 Gene3D G3DSA:2.60.40.360 21 139 4.3E-41 T 06-07-2017 IPR008962 PapD-like AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 PRINTS PR00969 Pili chaperone signature 68 89 1.0E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 PRINTS PR00969 Pili chaperone signature 121 136 1.0E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 PRINTS PR00969 Pili chaperone signature 157 172 1.0E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 PRINTS PR00969 Pili chaperone signature 21 30 1.0E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 PRINTS PR00969 Pili chaperone signature 98 115 1.0E-30 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 SUPERFAMILY SSF49354 21 143 1.2E-36 T 06-07-2017 IPR008962 PapD-like AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 162 220 3.5E-14 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 SUPERFAMILY SSF49584 146 232 4.84E-22 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 139 5.9E-33 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS06565 0381f4260f0ea6b35580e9c84686681b 236 Gene3D G3DSA:2.60.40.1070 145 231 3.1E-27 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.988 T 06-07-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 SUPERFAMILY SSF51735 2 182 1.07E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 SUPERFAMILY SSF55347 154 308 2.7E-50 T 06-07-2017 AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 Gene3D G3DSA:3.30.360.10 163 308 1.5E-49 T 06-07-2017 AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 4.4E-34 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 Gene3D G3DSA:3.40.50.720 1 162 9.4E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 06-07-2017 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 8.1E-18 T 06-07-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 SMART SM00859 3 146 6.4E-49 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM402_RS01150 61bbdcd913e9fce35c0af5df1e80e23d 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 3.9E-124 T 06-07-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 Gene3D G3DSA:3.40.50.720 464 635 1.2E-64 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 Gene3D G3DSA:3.30.360.10 636 791 3.8E-55 T 06-07-2017 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 SUPERFAMILY SSF51735 463 636 4.97E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 SUPERFAMILY SSF55021 304 381 5.56E-24 T 06-07-2017 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 SUPERFAMILY SSF55347 614 797 4.32E-51 T 06-07-2017 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 Pfam PF13840 ACT domain 314 375 1.1E-9 T 06-07-2017 IPR027795 GATS-like ACT domain AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 Pfam PF00696 Amino acid kinase family 2 284 4.8E-44 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.4E-143 T 06-07-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 06-07-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 06-07-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 Gene3D G3DSA:3.40.1160.10 111 298 1.4E-65 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 Gene3D G3DSA:3.40.1160.10 1 49 1.4E-65 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 5.0E-29 T 06-07-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 PIRSF PIRSF000727 1 817 0.0 T 06-07-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 Pfam PF00742 Homoserine dehydrogenase 614 810 3.5E-48 T 06-07-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 SUPERFAMILY SSF55021 383 476 2.78E-21 T 06-07-2017 AM402_RS19405 53337ac43f43f8dad7e16b26554c5c9d 819 SUPERFAMILY SSF53633 1 297 1.4E-72 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS00085 17059115c834eb9efbf39a8e3be2e683 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 06-07-2017 IPR019897 RidA, conserved site AM402_RS00085 17059115c834eb9efbf39a8e3be2e683 125 Gene3D G3DSA:3.30.1330.40 2 125 1.7E-48 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS00085 17059115c834eb9efbf39a8e3be2e683 125 Pfam PF01042 Endoribonuclease L-PSP 6 123 9.0E-41 T 06-07-2017 IPR006175 YjgF/YER057c/UK114 family AM402_RS00085 17059115c834eb9efbf39a8e3be2e683 125 SUPERFAMILY SSF55298 2 124 2.51E-44 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS00085 17059115c834eb9efbf39a8e3be2e683 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 123 4.3E-48 T 06-07-2017 IPR006056 RidA family AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 SUPERFAMILY SSF55904 571 719 9.81E-48 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 Gene3D G3DSA:3.90.100.10 594 719 9.5E-38 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 SUPERFAMILY SSF53383 109 567 1.01E-117 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 Gene3D G3DSA:3.40.50.220 1 108 2.2E-34 T 06-07-2017 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 5.5E-48 T 06-07-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 PIRSF PIRSF009393 2 720 1.2E-292 T 06-07-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 06-07-2017 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 1.0E-17 T 06-07-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 SUPERFAMILY SSF52172 1 108 1.04E-29 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 Gene3D G3DSA:3.40.640.10 109 419 4.0E-116 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 2.0E-197 T 06-07-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM402_RS17910 40b0a1b4ad45efb49994dd15a480be49 720 Gene3D G3DSA:3.90.1150.10 421 593 2.1E-71 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 PRINTS PR00148 Enolase signature 369 386 4.7E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 PRINTS PR00148 Enolase signature 317 328 4.7E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 PRINTS PR00148 Enolase signature 165 178 4.7E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 PRINTS PR00148 Enolase signature 340 354 4.7E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 PRINTS PR00148 Enolase signature 37 51 4.7E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 PRINTS PR00148 Enolase signature 107 123 4.7E-44 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 Gene3D G3DSA:3.30.390.10 3 127 3.7E-55 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 Pfam PF03952 Enolase, N-terminal domain 4 134 9.1E-59 T 06-07-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 SMART SM01193 4 134 2.2E-93 T 06-07-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 4.0E-139 T 06-07-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.2E-208 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 SUPERFAMILY SSF54826 3 138 5.21E-57 T 06-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 PIRSF PIRSF001400 1 431 3.1E-193 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 Gene3D G3DSA:3.20.20.120 128 429 7.5E-135 T 06-07-2017 IPR029065 Enolase C-terminal domain-like AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 SMART SM01192 143 431 7.4E-213 T 06-07-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 Hamap MF_00318 Enolase [eno]. 2 417 44.191 T 06-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 06-07-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18400 6cbc44f89e9bca40f63ef8ad9d19691a 433 SUPERFAMILY SSF51604 143 428 3.54E-126 T 06-07-2017 IPR029065 Enolase C-terminal domain-like AM402_RS07430 7e723b7338b6fe0f7b274828a69bbec8 360 Pfam PF00953 Glycosyl transferase family 4 99 284 9.4E-36 T 06-07-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AM402_RS07430 7e723b7338b6fe0f7b274828a69bbec8 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 1.2E-158 T 06-07-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS07430 7e723b7338b6fe0f7b274828a69bbec8 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 06-07-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS07430 7e723b7338b6fe0f7b274828a69bbec8 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 06-07-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS07430 7e723b7338b6fe0f7b274828a69bbec8 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 06-07-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS07430 7e723b7338b6fe0f7b274828a69bbec8 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.917 T 06-07-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.5E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.5E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.5E-15 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.4E-102 T 06-07-2017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 Gene3D G3DSA:3.40.50.720 3 243 9.8E-89 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 7.7E-5 T 06-07-2017 AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 SUPERFAMILY SSF51735 4 243 1.88E-86 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 4.7E-67 T 06-07-2017 AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.3E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.3E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.3E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.3E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.3E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 5.3E-50 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS14395 1ea61dbe29a006a230a9f25d67ece2dd 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS12960 68e7afb73462f1af5fc240e9503fdc7a 233 Gene3D G3DSA:3.30.420.40 4 134 2.3E-44 T 06-07-2017 AM402_RS12960 68e7afb73462f1af5fc240e9503fdc7a 233 Pfam PF00814 Glycoprotease family 30 150 3.4E-30 T 06-07-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS12960 68e7afb73462f1af5fc240e9503fdc7a 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 4.1E-68 T 06-07-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 AM402_RS12960 68e7afb73462f1af5fc240e9503fdc7a 233 SUPERFAMILY SSF53067 5 107 1.38E-30 T 06-07-2017 AM402_RS12960 68e7afb73462f1af5fc240e9503fdc7a 233 SUPERFAMILY SSF53067 111 219 7.77E-28 T 06-07-2017 AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 Gene3D G3DSA:2.40.50.100 184 253 2.6E-17 T 06-07-2017 AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 SUPERFAMILY SSF46785 2 103 3.08E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 5.4E-36 T 06-07-2017 IPR003725 Molybdenum-binding protein ModE, N-terminal AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 Pfam PF03459 TOBE domain 199 259 2.1E-8 T 06-07-2017 IPR005116 Transport-associated OB, type 1 AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 Pfam PF03459 TOBE domain 124 187 3.5E-15 T 06-07-2017 IPR005116 Transport-associated OB, type 1 AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 SUPERFAMILY SSF50331 170 259 1.06E-12 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 SUPERFAMILY SSF50331 122 190 7.05E-18 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 188 2.5E-24 T 06-07-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 PIRSF PIRSF005763 1 263 2.9E-94 T 06-07-2017 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 Gene3D G3DSA:2.40.50.100 119 183 1.3E-30 T 06-07-2017 AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 Gene3D G3DSA:1.10.10.10 1 118 2.3E-43 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16005 3211f83fdb81b25e1729ce3b5bf23ba6 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 81 3.6E-11 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 SUPERFAMILY SSF82693 38 132 3.14E-28 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 Gene3D G3DSA:3.30.70.1430 38 139 5.4E-36 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 SUPERFAMILY SSF82866 812 1037 2.49E-44 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 SUPERFAMILY SSF82693 566 670 1.94E-30 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 Gene3D G3DSA:3.30.2090.10 181 275 1.4E-23 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 Gene3D G3DSA:3.30.2090.10 725 806 7.9E-24 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 SUPERFAMILY SSF82714 182 272 6.15E-20 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 Pfam PF00873 AcrB/AcrD/AcrF family 1 1032 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 SUPERFAMILY SSF82866 296 497 2.22E-47 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 SUPERFAMILY SSF82693 135 182 7.98E-27 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 SUPERFAMILY SSF82693 274 330 7.98E-27 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 Gene3D G3DSA:1.10.3850.10 278 498 1.0E-57 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 Gene3D G3DSA:1.10.3850.10 819 1033 2.7E-55 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1045 0.0 T 06-07-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 SUPERFAMILY SSF82714 725 806 1.96E-20 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 Gene3D G3DSA:3.30.70.1430 568 670 1.8E-37 T 06-07-2017 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18785 9463e7b2c1a6c876e4e63fcd72075009 1052 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.9E-110 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 8.7E-14 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 Gene3D G3DSA:1.10.10.10 8 91 2.5E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 8.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 8.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 8.4E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 Gene3D G3DSA:3.40.190.10 97 181 1.5E-7 T 06-07-2017 AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 Pfam PF03466 LysR substrate binding domain 93 296 1.4E-23 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 Gene3D G3DSA:3.40.190.10 182 267 2.0E-12 T 06-07-2017 AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 SUPERFAMILY SSF46785 7 93 3.16E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS05780 986e32afd4dd584d4f358e4c02a640b2 303 SUPERFAMILY SSF53850 94 300 2.17E-24 T 06-07-2017 AM402_RS13150 11e98a798c3e66fea9be749e05bc8b61 566 Gene3D G3DSA:3.30.750.24 457 562 7.9E-11 T 06-07-2017 IPR002645 STAS domain AM402_RS13150 11e98a798c3e66fea9be749e05bc8b61 566 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 06-07-2017 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 AM402_RS13150 11e98a798c3e66fea9be749e05bc8b61 566 Pfam PF01740 STAS domain 460 558 9.3E-9 T 06-07-2017 IPR002645 STAS domain AM402_RS13150 11e98a798c3e66fea9be749e05bc8b61 566 Pfam PF00916 Sulfate permease family 29 414 4.2E-80 T 06-07-2017 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM402_RS13150 11e98a798c3e66fea9be749e05bc8b61 566 TIGRFAM TIGR00815 sulP: sulfate permease 19 558 1.5E-131 T 06-07-2017 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 AM402_RS13150 11e98a798c3e66fea9be749e05bc8b61 566 SUPERFAMILY SSF52091 458 560 2.75E-12 T 06-07-2017 IPR002645 STAS domain AM402_RS13780 93129baf0dffacfdd5072310d38e6376 1091 Pfam PF06120 Tail length tape measure protein 414 654 1.2E-5 T 06-07-2017 IPR009302 Tail length tape measure AM402_RS13780 93129baf0dffacfdd5072310d38e6376 1091 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 867 941 7.8E-25 T 06-07-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM402_RS13780 93129baf0dffacfdd5072310d38e6376 1091 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 152 224 9.3E-24 T 06-07-2017 IPR013491 Caudovirus, tape measure, N-terminal AM402_RS13780 93129baf0dffacfdd5072310d38e6376 1091 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 790 1019 1.7E-32 T 06-07-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM402_RS08575 0690ec06b73b65146bd42b894b0374cd 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 4.8E-37 T 06-07-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AM402_RS08575 0690ec06b73b65146bd42b894b0374cd 107 Gene3D G3DSA:2.60.300.12 2 95 3.4E-35 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS08575 0690ec06b73b65146bd42b894b0374cd 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.8E-25 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS08575 0690ec06b73b65146bd42b894b0374cd 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.6E-57 T 06-07-2017 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 AM402_RS08575 0690ec06b73b65146bd42b894b0374cd 107 SUPERFAMILY SSF89360 1 95 2.09E-32 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS08575 0690ec06b73b65146bd42b894b0374cd 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 37.617 T 06-07-2017 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 AM402_RS08575 0690ec06b73b65146bd42b894b0374cd 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 06-07-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site AM402_RS05560 adacfa906d7dfc89f3105e6bd173e706 83 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 11 75 1.1E-26 T 06-07-2017 IPR031856 Putative bacterial antitoxin YdaS AM402_RS05560 adacfa906d7dfc89f3105e6bd173e706 83 SUPERFAMILY SSF47413 11 71 4.5E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS05560 adacfa906d7dfc89f3105e6bd173e706 83 Gene3D G3DSA:1.10.260.40 10 82 7.2E-27 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS02530 31c3f84f79f387aaa80c22e78ecc1703 137 Pfam PF01479 S4 domain 10 56 1.4E-12 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS02530 31c3f84f79f387aaa80c22e78ecc1703 137 SMART SM00363 10 65 1.3E-6 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS02530 31c3f84f79f387aaa80c22e78ecc1703 137 Gene3D G3DSA:3.10.290.10 8 104 1.1E-35 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS02530 31c3f84f79f387aaa80c22e78ecc1703 137 PIRSF PIRSF016821 7 133 1.2E-41 T 06-07-2017 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AM402_RS02530 31c3f84f79f387aaa80c22e78ecc1703 137 SUPERFAMILY SSF55174 10 103 5.23E-28 T 06-07-2017 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 331 81.156 T 06-07-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 330 2.7E-131 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 328 2.4E-55 T 06-07-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 SUPERFAMILY SSF53671 1 331 1.7E-97 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 146 1.0E-44 T 06-07-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 3.6E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 3.6E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 3.6E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 295 318 3.6E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 3.6E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 122 136 3.6E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 309 320 3.6E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 82 95 3.6E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 3.6E-32 T 06-07-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 Gene3D G3DSA:3.40.50.1370 143 317 7.1E-71 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 Gene3D G3DSA:3.40.50.1370 3 142 5.6E-54 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20550 dea6fc7395752a20696686e020086c26 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS03160 ef50d6f45b8c417b9b8c6eb59f72db30 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 6.3E-121 T 06-07-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AM402_RS03160 ef50d6f45b8c417b9b8c6eb59f72db30 258 Pfam PF00005 ABC transporter 27 182 1.7E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS03160 ef50d6f45b8c417b9b8c6eb59f72db30 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS03160 ef50d6f45b8c417b9b8c6eb59f72db30 258 SUPERFAMILY SSF52540 12 244 2.01E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03160 ef50d6f45b8c417b9b8c6eb59f72db30 258 SMART SM00382 36 230 9.5E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS03160 ef50d6f45b8c417b9b8c6eb59f72db30 258 Gene3D G3DSA:3.40.50.300 12 252 2.9E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 Gene3D G3DSA:3.30.70.1170 173 230 2.6E-27 T 06-07-2017 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 422 4.5E-175 T 06-07-2017 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 Gene3D G3DSA:1.10.940.10 3 147 3.6E-45 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 418 4.6E-70 T 06-07-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 SUPERFAMILY SSF53335 141 421 1.81E-76 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 Pfam PF01029 NusB family 7 127 9.6E-25 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 Gene3D G3DSA:1.10.287.730 148 172 3.4E-14 T 06-07-2017 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 SUPERFAMILY SSF48013 6 149 6.8E-36 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 Gene3D G3DSA:3.40.50.150 233 422 1.2E-56 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 422 66.426 T 06-07-2017 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 06-07-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.8E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.8E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.8E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.8E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00850 d89875d52e2c036eb8e3446cb5917a30 422 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 404 421 2.8E-31 T 06-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 965 69.789 T 06-07-2017 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 Pfam PF00176 SNF2 family N-terminal domain 173 442 1.8E-19 T 06-07-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 Pfam PF12137 RNA polymerase recycling family C-terminal 604 964 3.1E-154 T 06-07-2017 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 Pfam PF00271 Helicase conserved C-terminal domain 491 600 1.5E-15 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 Gene3D G3DSA:3.40.50.300 155 321 1.6E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 Gene3D G3DSA:3.40.50.300 482 603 2.1E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 SUPERFAMILY SSF52540 132 376 1.21E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 SMART SM00490 516 600 3.7E-17 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 SMART SM00487 149 358 1.4E-21 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 SUPERFAMILY SSF52540 272 336 4.49E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06030 5d70459ec798c4080b0e4518b4947218 967 SUPERFAMILY SSF52540 479 641 4.49E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 3.6E-33 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 SUPERFAMILY SSF88659 163 238 4.67E-21 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 Gene3D G3DSA:1.10.601.10 10 80 1.2E-14 T 06-07-2017 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 Pfam PF04542 Sigma-70 region 2 16 88 4.3E-16 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 2.9E-83 T 06-07-2017 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 6.4E-14 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 6.4E-14 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 6.4E-14 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 6.4E-14 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 6.4E-14 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 Pfam PF04545 Sigma-70, region 4 185 234 2.1E-17 T 06-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 61.015 T 06-07-2017 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 SUPERFAMILY SSF88659 90 151 1.31E-14 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 Gene3D G3DSA:1.10.10.10 174 238 7.6E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 Gene3D G3DSA:1.10.10.10 90 135 2.5E-9 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 SUPERFAMILY SSF88946 5 88 5.65E-23 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 Pfam PF04539 Sigma-70 region 3 97 169 1.6E-17 T 06-07-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS09870 ba2eabc18a3d4932351d6a6f729ab068 240 PIRSF PIRSF000770 3 240 1.7E-38 T 06-07-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 Gene3D G3DSA:2.40.37.10 256 412 1.3E-54 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 44 62 - T 06-07-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 SUPERFAMILY SSF51419 18 270 2.36E-55 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 7 412 38.194 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 411 9.1E-129 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 268 2.9E-54 T 06-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 SUPERFAMILY SSF50621 244 412 1.21E-55 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 3.1E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 76 3.1E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 258 277 3.1E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 44 62 3.1E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 3.1E-19 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 286 304 1.1E-24 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 62 79 1.1E-24 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 1.1E-24 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 150 159 1.1E-24 T 06-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 273 388 4.9E-17 T 06-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AM402_RS17280 6058f1de408eb69069727a50127a9be3 414 Gene3D G3DSA:3.20.20.10 37 255 6.6E-62 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS19720 fe17dbdd0a4ead3872e450866f1b0e9c 259 Pfam PF02405 Permease MlaE 44 255 2.4E-75 T 06-07-2017 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AM402_RS19720 fe17dbdd0a4ead3872e450866f1b0e9c 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 257 9.6E-103 T 06-07-2017 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 Pfam PF00149 Calcineurin-like phosphoesterase 33 273 4.0E-7 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 SUPERFAMILY SSF56300 27 345 1.17E-68 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 Gene3D G3DSA:3.60.21.10 27 342 3.5E-75 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 PRINTS PR01607 Apyrase family signature 478 497 2.6E-16 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 PRINTS PR01607 Apyrase family signature 256 279 2.6E-16 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 PRINTS PR01607 Apyrase family signature 30 48 2.6E-16 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 PRINTS PR01607 Apyrase family signature 405 428 2.6E-16 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 SUPERFAMILY SSF55816 345 539 1.44E-48 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 Pfam PF02872 5'-nucleotidase, C-terminal domain 348 505 1.8E-38 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19175 6a59fe6f1f9b4a8b4cc36eb12fe9e3ea 540 Gene3D G3DSA:3.90.780.10 348 538 2.6E-48 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS08000 79ebb14d9b1266aa5f5370153c051ba2 854 SUPERFAMILY SSF141729 50 163 1.7E-24 T 06-07-2017 AM402_RS08000 79ebb14d9b1266aa5f5370153c051ba2 854 Pfam PF13954 PapC N-terminal domain 30 171 3.2E-30 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS08000 79ebb14d9b1266aa5f5370153c051ba2 854 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 304 314 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site AM402_RS08000 79ebb14d9b1266aa5f5370153c051ba2 854 Pfam PF00577 Outer membrane usher protein 191 764 2.0E-144 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS08000 79ebb14d9b1266aa5f5370153c051ba2 854 Pfam PF13953 PapC C-terminal domain 773 836 2.9E-18 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS16570 6f7354fa8019ea5e4ddc5155b53b71d2 69 Pfam PF01381 Helix-turn-helix 4 52 4.5E-11 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS16570 6f7354fa8019ea5e4ddc5155b53b71d2 69 Gene3D G3DSA:1.10.260.40 2 66 4.0E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS16570 6f7354fa8019ea5e4ddc5155b53b71d2 69 SUPERFAMILY SSF47413 2 52 1.74E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS16570 6f7354fa8019ea5e4ddc5155b53b71d2 69 SMART SM00530 3 54 1.5E-6 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS03930 1a6bd4e77c1ccb2cbffcfb801b0b760d 327 SUPERFAMILY SSF51735 112 274 7.79E-46 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS03930 1a6bd4e77c1ccb2cbffcfb801b0b760d 327 Gene3D G3DSA:3.40.50.720 146 245 2.7E-26 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS03930 1a6bd4e77c1ccb2cbffcfb801b0b760d 327 SMART SM00829 11 325 1.5E-29 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM402_RS03930 1a6bd4e77c1ccb2cbffcfb801b0b760d 327 Pfam PF00107 Zinc-binding dehydrogenase 152 251 4.6E-26 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM402_RS03930 1a6bd4e77c1ccb2cbffcfb801b0b760d 327 SUPERFAMILY SSF50129 8 142 2.59E-33 T 06-07-2017 IPR011032 GroES-like AM402_RS03930 1a6bd4e77c1ccb2cbffcfb801b0b760d 327 Gene3D G3DSA:3.90.180.10 3 145 2.1E-42 T 06-07-2017 IPR011032 GroES-like AM402_RS03930 1a6bd4e77c1ccb2cbffcfb801b0b760d 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.9E-8 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM402_RS03930 1a6bd4e77c1ccb2cbffcfb801b0b760d 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 06-07-2017 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 2.4E-70 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 2.4E-70 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 2.4E-70 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 2.4E-70 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 2.4E-70 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 2.4E-70 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 PIRSF PIRSF000904 1 333 8.5E-123 T 06-07-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 42.033 T 06-07-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 PIRSF PIRSF500210 1 332 1.3E-125 T 06-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 06-07-2017 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 194 1.1E-77 T 06-07-2017 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 Gene3D G3DSA:3.40.190.80 197 329 1.5E-57 T 06-07-2017 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 Gene3D G3DSA:3.30.540.10 2 194 2.6E-76 T 06-07-2017 AM402_RS00245 85d753e55391e72fe3ce97cf6c18e0ed 335 SUPERFAMILY SSF56655 2 327 1.35E-109 T 06-07-2017 AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 Pfam PF01546 Peptidase family M20/M25/M40 85 412 3.6E-28 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 Pfam PF07687 Peptidase dimerisation domain 223 318 4.2E-5 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 SUPERFAMILY SSF53187 343 412 7.14E-76 T 06-07-2017 AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 SUPERFAMILY SSF53187 19 229 7.14E-76 T 06-07-2017 AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 SUPERFAMILY SSF55031 221 335 6.02E-24 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 Gene3D G3DSA:3.40.630.10 358 416 3.5E-92 T 06-07-2017 AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 Gene3D G3DSA:3.40.630.10 16 232 3.5E-92 T 06-07-2017 AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 PIRSF PIRSF001235 11 418 1.1E-134 T 06-07-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 29 412 7.2E-114 T 06-07-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM402_RS18050 683f49c8a017111a69af0f1f9df369be 418 Gene3D G3DSA:3.30.70.360 233 336 4.4E-33 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 Pfam PF13377 Periplasmic binding protein-like domain 177 312 2.0E-13 T 06-07-2017 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 SUPERFAMILY SSF47413 7 63 2.53E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 8 317 9.6E-111 T 06-07-2017 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 Gene3D G3DSA:1.10.260.40 7 63 1.4E-20 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 SMART SM00354 8 78 5.0E-22 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 SUPERFAMILY SSF53822 68 315 3.44E-45 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 1.7E-16 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 Gene3D G3DSA:3.40.50.2300 191 281 5.5E-27 T 06-07-2017 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 Gene3D G3DSA:3.40.50.2300 68 190 2.4E-31 T 06-07-2017 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 20 30 4.6E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS18025 c10600c11f205b4ded291ee4c4506d77 322 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 10 20 4.6E-5 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 Pfam PF00005 ABC transporter 21 169 3.2E-36 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 Gene3D G3DSA:3.30.70.260 238 343 1.5E-27 T 06-07-2017 AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 SMART SM00382 30 217 3.5E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 SMART SM00930 265 340 5.6E-20 T 06-07-2017 IPR018449 NIL domain AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 2.2E-186 T 06-07-2017 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 SUPERFAMILY SSF52540 1 240 1.06E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 Pfam PF09383 NIL domain 268 339 2.4E-16 T 06-07-2017 IPR018449 NIL domain AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 Gene3D G3DSA:3.40.50.300 1 237 1.5E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06375 737c485b6133eb88fe9128bf5c7ccaba 343 SUPERFAMILY SSF55021 248 343 1.13E-22 T 06-07-2017 AM402_RS15245 64ff7a405367bf3599e9977a9bc44e10 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.6E-34 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS15245 64ff7a405367bf3599e9977a9bc44e10 172 SUPERFAMILY SSF141452 3 168 5.36E-41 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS15245 64ff7a405367bf3599e9977a9bc44e10 172 Gene3D G3DSA:2.30.110.20 1 166 1.2E-34 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS15245 64ff7a405367bf3599e9977a9bc44e10 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 5.9E-66 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS08370 21ccee611c0386a0aac886f59bce7adb 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM402_RS08370 21ccee611c0386a0aac886f59bce7adb 127 SUPERFAMILY SSF51998 33 125 1.1E-24 T 06-07-2017 AM402_RS08370 21ccee611c0386a0aac886f59bce7adb 127 Gene3D G3DSA:3.20.70.20 33 126 8.6E-34 T 06-07-2017 AM402_RS08370 21ccee611c0386a0aac886f59bce7adb 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 8.7E-69 T 06-07-2017 IPR011140 Autonomous glycyl radical cofactor GrcA AM402_RS08370 21ccee611c0386a0aac886f59bce7adb 127 PIRSF PIRSF000378 2 127 2.5E-53 T 06-07-2017 IPR011140 Autonomous glycyl radical cofactor GrcA AM402_RS08370 21ccee611c0386a0aac886f59bce7adb 127 Pfam PF01228 Glycine radical 17 108 4.7E-22 T 06-07-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM402_RS08370 21ccee611c0386a0aac886f59bce7adb 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 39.886 T 06-07-2017 IPR011140 Autonomous glycyl radical cofactor GrcA AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 2.1E-182 T 06-07-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 Gene3D G3DSA:3.20.70.20 130 344 3.3E-43 T 06-07-2017 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 Gene3D G3DSA:3.20.70.20 610 699 3.3E-43 T 06-07-2017 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 Gene3D G3DSA:3.20.70.20 398 559 3.3E-43 T 06-07-2017 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 Pfam PF02867 Ribonucleotide reductase, barrel domain 666 731 1.1E-6 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 661 3.8E-114 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 SUPERFAMILY SSF48168 10 221 3.27E-73 T 06-07-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.3E-41 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.3E-41 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.3E-41 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.3E-41 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.3E-41 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.3E-41 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 1.9E-12 T 06-07-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 SUPERFAMILY SSF51998 222 741 9.16E-170 T 06-07-2017 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09255 262e6ff91adf2562fd02fa01e80510c3 763 Pfam PF03477 ATP cone domain 6 92 1.2E-17 T 06-07-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM402_RS19465 6eb2cb9ca5d1392ea8a6e83196d8d53f 182 SUPERFAMILY SSF88946 14 94 2.35E-13 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19465 6eb2cb9ca5d1392ea8a6e83196d8d53f 182 Pfam PF04542 Sigma-70 region 2 15 80 2.8E-11 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19465 6eb2cb9ca5d1392ea8a6e83196d8d53f 182 Gene3D G3DSA:1.10.1740.10 15 96 1.3E-12 T 06-07-2017 AM402_RS19465 6eb2cb9ca5d1392ea8a6e83196d8d53f 182 SUPERFAMILY SSF88659 108 171 2.83E-16 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19465 6eb2cb9ca5d1392ea8a6e83196d8d53f 182 Gene3D G3DSA:1.10.10.10 108 171 2.7E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19465 6eb2cb9ca5d1392ea8a6e83196d8d53f 182 Pfam PF08281 Sigma-70, region 4 116 167 2.4E-17 T 06-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19465 6eb2cb9ca5d1392ea8a6e83196d8d53f 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 169 4.5E-25 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 SUPERFAMILY SSF50156 241 348 1.17E-20 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 9.4E-141 T 06-07-2017 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 Gene3D G3DSA:2.40.10.10 43 143 5.3E-30 T 06-07-2017 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 Gene3D G3DSA:2.30.42.10 260 353 9.6E-23 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 PRINTS PR00834 HtrA/DegQ protease family signature 184 201 4.4E-47 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 PRINTS PR00834 HtrA/DegQ protease family signature 206 223 4.4E-47 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 PRINTS PR00834 HtrA/DegQ protease family signature 149 173 4.4E-47 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 PRINTS PR00834 HtrA/DegQ protease family signature 298 310 4.4E-47 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 PRINTS PR00834 HtrA/DegQ protease family signature 88 100 4.4E-47 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 PRINTS PR00834 HtrA/DegQ protease family signature 109 129 4.4E-47 T 06-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 Pfam PF13180 PDZ domain 260 348 2.7E-15 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 Pfam PF13365 Trypsin-like peptidase domain 79 213 4.7E-29 T 06-07-2017 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 Gene3D G3DSA:2.40.10.10 146 259 2.3E-37 T 06-07-2017 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 SMART SM00228 258 340 2.7E-9 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS19685 a0f6834edf5958dcd9f7d00da7f22bda 356 SUPERFAMILY SSF50494 43 255 3.38E-59 T 06-07-2017 IPR009003 Peptidase S1, PA clan AM402_RS18500 fc367789a08fe39bbf1ef278fd02b789 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.7E-61 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM402_RS18500 fc367789a08fe39bbf1ef278fd02b789 126 PIRSF PIRSF006246 1 125 1.7E-51 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM402_RS18500 fc367789a08fe39bbf1ef278fd02b789 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.5E-47 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM402_RS18500 fc367789a08fe39bbf1ef278fd02b789 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-53 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM402_RS18500 fc367789a08fe39bbf1ef278fd02b789 126 Gene3D G3DSA:2.40.40.20 1 124 1.4E-54 T 06-07-2017 AM402_RS18500 fc367789a08fe39bbf1ef278fd02b789 126 SUPERFAMILY SSF50692 1 121 1.33E-47 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS18500 fc367789a08fe39bbf1ef278fd02b789 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.958 T 06-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM402_RS14930 00f3ca272fe9dd6215ef807078f77525 110 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 29 81 5.1E-13 T 06-07-2017 IPR018660 C-type lysozyme, inhibitor AM402_RS14930 00f3ca272fe9dd6215ef807078f77525 110 SUPERFAMILY SSF141488 25 81 5.49E-15 T 06-07-2017 IPR018660 C-type lysozyme, inhibitor AM402_RS17915 d1ebf14a96305ace99a523c4c621c4d1 442 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 432 6.5E-239 T 06-07-2017 IPR027566 Putrescine-ornithine antiporter GO:0015496|GO:0015822|GO:0015847 AM402_RS17915 d1ebf14a96305ace99a523c4c621c4d1 442 PIRSF PIRSF006060 1 440 7.2E-52 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS17915 d1ebf14a96305ace99a523c4c621c4d1 442 Pfam PF13520 Amino acid permease 9 413 2.5E-51 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS17915 d1ebf14a96305ace99a523c4c621c4d1 442 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 1.5E-142 T 06-07-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM402_RS14435 f9d6f7c1e13a4fdc47d6e05831c6370e 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS14435 f9d6f7c1e13a4fdc47d6e05831c6370e 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 3.5E-95 T 06-07-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS14435 f9d6f7c1e13a4fdc47d6e05831c6370e 317 Pfam PF01479 S4 domain 19 65 8.3E-10 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS14435 f9d6f7c1e13a4fdc47d6e05831c6370e 317 Gene3D G3DSA:3.10.290.10 19 67 2.0E-6 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS14435 f9d6f7c1e13a4fdc47d6e05831c6370e 317 Pfam PF00849 RNA pseudouridylate synthase 100 247 4.7E-29 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS14435 f9d6f7c1e13a4fdc47d6e05831c6370e 317 SUPERFAMILY SSF55120 94 313 3.04E-64 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS14435 f9d6f7c1e13a4fdc47d6e05831c6370e 317 SUPERFAMILY SSF55174 18 69 6.92E-9 T 06-07-2017 AM402_RS14435 f9d6f7c1e13a4fdc47d6e05831c6370e 317 SMART SM00363 19 78 2.6E-8 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 2.7E-31 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 06-07-2017 AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 Gene3D G3DSA:3.40.50.1000 1 76 4.0E-60 T 06-07-2017 IPR023214 HAD-like domain AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 Gene3D G3DSA:3.40.50.1000 183 268 4.0E-60 T 06-07-2017 IPR023214 HAD-like domain AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 SUPERFAMILY SSF56784 1 268 2.57E-77 T 06-07-2017 IPR023214 HAD-like domain AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 5.6E-71 T 06-07-2017 IPR023214 HAD-like domain AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 Gene3D G3DSA:3.30.1240.10 88 182 1.8E-35 T 06-07-2017 AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 06-07-2017 IPR000150 Cof protein GO:0016787 AM402_RS09995 563ad0c03b23ceda69c65b5898c9bf37 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 8.9E-72 T 06-07-2017 IPR000150 Cof protein GO:0016787 AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 Gene3D G3DSA:2.30.40.10 559 583 1.8E-15 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 Gene3D G3DSA:2.30.40.10 26 86 1.8E-15 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 SUPERFAMILY SSF51338 24 85 1.82E-20 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 SUPERFAMILY SSF51338 545 585 1.82E-20 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 Gene3D G3DSA:2.30.40.10 532 558 3.5E-7 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 Pfam PF07969 Amidohydrolase family 74 585 1.5E-69 T 06-07-2017 IPR013108 Amidohydrolase 3 AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 SUPERFAMILY SSF51556 226 290 5.21E-32 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 SUPERFAMILY SSF51556 320 546 5.21E-32 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 SUPERFAMILY SSF51556 84 124 5.21E-32 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 Gene3D G3DSA:3.20.20.140 87 107 2.1E-29 T 06-07-2017 AM402_RS15800 57b12006f4f2c38fecd65d8b0c7a99a0 586 Gene3D G3DSA:3.20.20.140 228 531 2.1E-29 T 06-07-2017 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 SUPERFAMILY SSF52935 325 475 3.05E-18 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 470 2.4E-10 T 06-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 Gene3D G3DSA:2.40.33.10 73 168 1.6E-29 T 06-07-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 Gene3D G3DSA:3.40.1380.20 328 475 1.7E-24 T 06-07-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 9.7E-126 T 06-07-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 SUPERFAMILY SSF50800 70 165 3.14E-24 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 SUPERFAMILY SSF51621 1 75 1.61E-89 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 SUPERFAMILY SSF51621 167 341 1.61E-89 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 473 3.6E-155 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 Gene3D G3DSA:3.20.20.60 169 327 4.0E-96 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 Gene3D G3DSA:3.20.20.60 2 72 4.0E-96 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 PRINTS PR01050 Pyruvate kinase family signature 271 295 6.6E-53 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 PRINTS PR01050 Pyruvate kinase family signature 246 270 6.6E-53 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 PRINTS PR01050 Pyruvate kinase family signature 296 314 6.6E-53 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 PRINTS PR01050 Pyruvate kinase family signature 315 331 6.6E-53 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 PRINTS PR01050 Pyruvate kinase family signature 59 75 6.6E-53 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 PRINTS PR01050 Pyruvate kinase family signature 219 245 6.6E-53 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS05630 5490f58d6dc37d7fcf40cfbe0afa9acf 483 PRINTS PR01050 Pyruvate kinase family signature 186 200 6.6E-53 T 06-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM402_RS19610 5f9543275bd77ad77943e5e89b95f3c0 233 Gene3D G3DSA:1.10.3810.10 51 219 7.3E-60 T 06-07-2017 AM402_RS19610 5f9543275bd77ad77943e5e89b95f3c0 233 SUPERFAMILY SSF53955 49 222 1.01E-59 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS19610 5f9543275bd77ad77943e5e89b95f3c0 233 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 1 224 40.119 T 06-07-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AM402_RS19610 5f9543275bd77ad77943e5e89b95f3c0 233 Pfam PF00912 Transglycosylase 51 218 2.9E-50 T 06-07-2017 IPR001264 Glycosyl transferase, family 51 AM402_RS19610 5f9543275bd77ad77943e5e89b95f3c0 233 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 3 221 2.6E-82 T 06-07-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AM402_RS20820 59aa0279636ff01fd824ca68d67af429 329 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 25 192 1.4E-25 T 06-07-2017 IPR010183 Bacteriophage lambda, Bet AM402_RS20820 59aa0279636ff01fd824ca68d67af429 329 Pfam PF03837 RecT family 39 198 8.4E-26 T 06-07-2017 IPR018330 RecT family GO:0003677|GO:0006259 AM402_RS03295 3f2d1c763ae06f234ea78be81cae12a2 91 Pfam PF01192 RNA polymerase Rpb6 10 59 2.2E-15 T 06-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM402_RS03295 3f2d1c763ae06f234ea78be81cae12a2 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-29 T 06-07-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03295 3f2d1c763ae06f234ea78be81cae12a2 91 SMART SM01409 8 61 9.6E-15 T 06-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM402_RS03295 3f2d1c763ae06f234ea78be81cae12a2 91 Gene3D G3DSA:3.90.940.10 1 78 9.6E-16 T 06-07-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM402_RS03295 3f2d1c763ae06f234ea78be81cae12a2 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.353 T 06-07-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM402_RS03295 3f2d1c763ae06f234ea78be81cae12a2 91 SUPERFAMILY SSF63562 1 79 4.36E-25 T 06-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM402_RS06425 2120fac4a4c456e92f7e4ab1710b7ce6 393 PIRSF PIRSF001434 1 393 6.8E-147 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS06425 2120fac4a4c456e92f7e4ab1710b7ce6 393 SUPERFAMILY SSF53383 27 392 1.33E-126 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS06425 2120fac4a4c456e92f7e4ab1710b7ce6 393 Gene3D G3DSA:3.40.640.10 8 258 5.0E-99 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS06425 2120fac4a4c456e92f7e4ab1710b7ce6 393 Gene3D G3DSA:3.90.1150.10 259 393 8.9E-53 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS06425 2120fac4a4c456e92f7e4ab1710b7ce6 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 392 6.7E-147 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS06425 2120fac4a4c456e92f7e4ab1710b7ce6 393 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 7 392 2.2E-169 T 06-07-2017 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2 AM402_RS02585 39c521127c14229af6a719ca14e500de 248 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 8.0E-113 T 06-07-2017 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM402_RS02585 39c521127c14229af6a719ca14e500de 248 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 38.517 T 06-07-2017 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM402_RS02585 39c521127c14229af6a719ca14e500de 248 Gene3D G3DSA:3.40.1630.10 1 56 1.6E-27 T 06-07-2017 AM402_RS02585 39c521127c14229af6a719ca14e500de 248 Gene3D G3DSA:3.40.50.150 57 246 1.4E-76 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS02585 39c521127c14229af6a719ca14e500de 248 SUPERFAMILY SSF53335 3 246 4.17E-78 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS18035 a6344cb42337ec47347d31b3d4719612 905 Gene3D G3DSA:1.50.10.10 417 821 2.3E-114 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AM402_RS18035 a6344cb42337ec47347d31b3d4719612 905 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 127 371 3.8E-52 T 06-07-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AM402_RS18035 a6344cb42337ec47347d31b3d4719612 905 SUPERFAMILY SSF48208 395 888 6.91E-94 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM402_RS18035 a6344cb42337ec47347d31b3d4719612 905 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 422 836 1.1E-117 T 06-07-2017 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 AM402_RS18035 a6344cb42337ec47347d31b3d4719612 905 Gene3D G3DSA:2.60.420.10 823 891 8.6E-17 T 06-07-2017 AM402_RS18035 a6344cb42337ec47347d31b3d4719612 905 Gene3D G3DSA:2.70.98.40 115 372 6.4E-67 T 06-07-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AM402_RS18035 a6344cb42337ec47347d31b3d4719612 905 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 840 886 2.2E-5 T 06-07-2017 IPR005194 Glycoside hydrolase family 65, C-terminal AM402_RS18035 a6344cb42337ec47347d31b3d4719612 905 SUPERFAMILY SSF74650 115 372 7.53E-55 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PIRSF PIRSF000207 1 604 4.1E-262 T 06-07-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 604 1.5E-264 T 06-07-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 391 398 2.2E-28 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 499 510 2.2E-28 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 553 561 2.2E-28 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 486 495 2.2E-28 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 530 546 2.2E-28 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 275 285 2.2E-28 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 424 433 2.2E-28 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 461 480 2.2E-28 T 06-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00369 Flavodoxin signature 116 127 1.4E-10 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00369 Flavodoxin signature 68 81 1.4E-10 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00369 Flavodoxin signature 172 191 1.4E-10 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 PRINTS PR00369 Flavodoxin signature 148 158 1.4E-10 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Gene3D G3DSA:3.40.50.80 460 603 5.0E-57 T 06-07-2017 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Gene3D G3DSA:1.20.990.10 286 388 1.1E-33 T 06-07-2017 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 SUPERFAMILY SSF52343 449 604 1.57E-49 T 06-07-2017 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Gene3D G3DSA:3.40.50.360 60 211 6.8E-45 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Gene3D G3DSA:2.40.30.10 234 285 4.2E-37 T 06-07-2017 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Gene3D G3DSA:2.40.30.10 389 459 4.2E-37 T 06-07-2017 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Pfam PF00667 FAD binding domain 237 429 9.4E-30 T 06-07-2017 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 SUPERFAMILY SSF52218 66 213 1.28E-42 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 604 48.513 T 06-07-2017 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 SUPERFAMILY SSF63380 234 451 4.92E-63 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Pfam PF00258 Flavodoxin 69 196 4.1E-29 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM402_RS06445 dfe1b2bde7010394dbe8191625818800 604 Pfam PF00175 Oxidoreductase NAD-binding domain 462 568 6.2E-19 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM402_RS20810 4dc27d1a21f12988eb2f603aa2b9828d 370 Gene3D G3DSA:3.90.350.10 239 329 2.9E-8 T 06-07-2017 IPR014736 Transposase, Tn5-like, core AM402_RS20810 4dc27d1a21f12988eb2f603aa2b9828d 370 Pfam PF01609 Transposase DDE domain 107 348 1.1E-29 T 06-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM402_RS20810 4dc27d1a21f12988eb2f603aa2b9828d 370 SUPERFAMILY SSF53098 55 349 7.51E-39 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS11275 9084777c401b8e6f41f700a9e3238f45 79 SUPERFAMILY SSF58042 23 78 2.88E-17 T 06-07-2017 AM402_RS11275 9084777c401b8e6f41f700a9e3238f45 79 Pfam PF04728 Lipoprotein leucine-zipper 27 79 2.5E-23 T 06-07-2017 IPR006817 Lipoprotein leucine-zipper GO:0019867 AM402_RS11275 9084777c401b8e6f41f700a9e3238f45 79 Gene3D G3DSA:1.20.5.190 23 72 1.1E-9 T 06-07-2017 AM402_RS11275 9084777c401b8e6f41f700a9e3238f45 79 PIRSF PIRSF002855 1 79 1.1E-29 T 06-07-2017 IPR016367 Murein-lipoprotein AM402_RS19595 3d669f6e78c2a1178e8583fe893b4ba2 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-46 T 06-07-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19595 3d669f6e78c2a1178e8583fe893b4ba2 100 Pfam PF00547 Urease, gamma subunit 1 99 2.3E-46 T 06-07-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19595 3d669f6e78c2a1178e8583fe893b4ba2 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.661 T 06-07-2017 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19595 3d669f6e78c2a1178e8583fe893b4ba2 100 SUPERFAMILY SSF54111 1 99 2.09E-44 T 06-07-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19595 3d669f6e78c2a1178e8583fe893b4ba2 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 6.1E-50 T 06-07-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19595 3d669f6e78c2a1178e8583fe893b4ba2 100 PIRSF PIRSF001223 1 100 2.2E-49 T 06-07-2017 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19595 3d669f6e78c2a1178e8583fe893b4ba2 100 Gene3D G3DSA:3.30.280.10 1 99 6.1E-48 T 06-07-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19355 ee64bb8a09cf30094b53b74280601a7f 392 Gene3D G3DSA:1.20.1530.10 5 383 2.9E-155 T 06-07-2017 IPR023171 Na/H antiporter domain AM402_RS19355 ee64bb8a09cf30094b53b74280601a7f 392 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 1.3E-166 T 06-07-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM402_RS19355 ee64bb8a09cf30094b53b74280601a7f 392 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 386 23.503 T 06-07-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM402_RS19355 ee64bb8a09cf30094b53b74280601a7f 392 Pfam PF06965 Na+/H+ antiporter 1 7 380 7.8E-150 T 06-07-2017 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM402_RS00570 5c10f9663c1015b44cf71b398eb0a9db 105 SUPERFAMILY SSF55387 1 105 4.71E-38 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM402_RS00570 5c10f9663c1015b44cf71b398eb0a9db 105 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 06-07-2017 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM402_RS00570 5c10f9663c1015b44cf71b398eb0a9db 105 SMART SM01219 1 104 3.1E-53 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM402_RS00570 5c10f9663c1015b44cf71b398eb0a9db 105 Gene3D G3DSA:3.30.920.10 1 105 1.8E-35 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM402_RS00570 5c10f9663c1015b44cf71b398eb0a9db 105 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 28.243 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM402_RS00570 5c10f9663c1015b44cf71b398eb0a9db 105 Pfam PF01491 Frataxin-like domain 1 101 9.3E-31 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM402_RS00570 5c10f9663c1015b44cf71b398eb0a9db 105 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 1.0E-43 T 06-07-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM402_RS13350 f53a245e930f95287b34d67397eb9215 381 SUPERFAMILY SSF53383 4 378 7.8E-111 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS13350 f53a245e930f95287b34d67397eb9215 381 Gene3D G3DSA:3.90.1150.10 253 379 1.2E-37 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS13350 f53a245e930f95287b34d67397eb9215 381 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 71.138 T 06-07-2017 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 AM402_RS13350 f53a245e930f95287b34d67397eb9215 381 Gene3D G3DSA:3.40.640.10 4 251 1.1E-86 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS13350 f53a245e930f95287b34d67397eb9215 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 3.8E-129 T 06-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM402_RS13350 f53a245e930f95287b34d67397eb9215 381 PIRSF PIRSF000390 1 381 9.9E-111 T 06-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM402_RS00540 180b165f3df708b89396037227f6733c 718 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 5.0E-75 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM402_RS00540 180b165f3df708b89396037227f6733c 718 Gene3D G3DSA:1.10.486.10 388 541 8.7E-50 T 06-07-2017 AM402_RS00540 180b165f3df708b89396037227f6733c 718 SUPERFAMILY SSF52540 7 642 1.88E-180 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00540 180b165f3df708b89396037227f6733c 718 Gene3D G3DSA:3.40.50.300 286 387 3.8E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00540 180b165f3df708b89396037227f6733c 718 Gene3D G3DSA:3.40.50.300 552 642 3.8E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00540 180b165f3df708b89396037227f6733c 718 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.3E-73 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AM402_RS00540 180b165f3df708b89396037227f6733c 718 Gene3D G3DSA:1.10.10.160 114 190 1.4E-23 T 06-07-2017 IPR013986 DExx box DNA helicase domain AM402_RS00540 180b165f3df708b89396037227f6733c 718 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 06-07-2017 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AM402_RS00540 180b165f3df708b89396037227f6733c 718 Gene3D G3DSA:3.40.50.300 191 285 2.6E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00540 180b165f3df708b89396037227f6733c 718 Gene3D G3DSA:3.40.50.300 6 110 2.6E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20735 6e57eff0b29405d6661eeb6b15aeca35 371 Gene3D G3DSA:3.90.350.10 241 331 2.9E-8 T 06-07-2017 IPR014736 Transposase, Tn5-like, core AM402_RS20735 6e57eff0b29405d6661eeb6b15aeca35 371 SUPERFAMILY SSF53098 57 351 7.59E-39 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS20735 6e57eff0b29405d6661eeb6b15aeca35 371 Pfam PF01609 Transposase DDE domain 109 350 1.1E-29 T 06-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM402_RS13725 c7a50c8d035dce770e3a4582ba162839 101 Pfam PF01381 Helix-turn-helix 12 66 2.0E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS13725 c7a50c8d035dce770e3a4582ba162839 101 SMART SM00530 11 66 3.0E-11 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS13725 c7a50c8d035dce770e3a4582ba162839 101 Gene3D G3DSA:1.10.260.40 3 72 6.1E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS13725 c7a50c8d035dce770e3a4582ba162839 101 SUPERFAMILY SSF47413 2 69 6.97E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 6.2E-151 T 06-07-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 Gene3D G3DSA:1.10.40.30 390 445 3.6E-33 T 06-07-2017 AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 Pfam PF00206 Lyase 14 312 1.4E-76 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 SUPERFAMILY SSF48557 4 447 1.56E-105 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 5.3E-53 T 06-07-2017 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 Gene3D G3DSA:1.20.200.10 120 389 2.7E-89 T 06-07-2017 AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 5.0E-17 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.0E-17 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 5.0E-17 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.0E-17 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS14265 2b66537b29ad5ed4862c8aa71ffec3d4 456 Gene3D G3DSA:1.10.275.10 1 119 1.3E-49 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 Pfam PF00909 Ammonium Transporter Family 37 430 1.8E-123 T 06-07-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 PRINTS PR00342 Rhesus blood group protein signature 256 278 1.3E-6 T 06-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 PRINTS PR00342 Rhesus blood group protein signature 311 329 1.3E-6 T 06-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 PRINTS PR00342 Rhesus blood group protein signature 129 145 1.3E-6 T 06-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 PRINTS PR00342 Rhesus blood group protein signature 225 243 1.3E-6 T 06-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 TIGRFAM TIGR00836 amt: ammonium transporter 34 430 2.1E-135 T 06-07-2017 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 Gene3D G3DSA:1.10.3430.10 30 411 5.8E-135 T 06-07-2017 IPR029020 Ammonium/urea transporter AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 SUPERFAMILY SSF111352 30 411 5.23E-127 T 06-07-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM402_RS18810 a8b5ea0521d6b923d1bd349d0f1ec437 432 ProSitePatterns PS01219 Ammonium transporters signature. 186 211 - T 06-07-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.23 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 Gene3D G3DSA:2.160.10.10 140 309 5.0E-41 T 06-07-2017 AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 Gene3D G3DSA:2.160.10.10 100 139 2.4E-12 T 06-07-2017 AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 SUPERFAMILY SSF51161 33 316 5.09E-88 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 6.9E-21 T 06-07-2017 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.764 T 06-07-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 2.9E-7 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 179 3.0E-8 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.3E-9 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS06295 888656e99c7ccf29ef129d01c57f9903 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.1E-125 T 06-07-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM402_RS09955 abead4e4bba78ed2dcb49ebf6b976fc3 186 Gene3D G3DSA:3.90.79.10 24 183 2.1E-38 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS09955 abead4e4bba78ed2dcb49ebf6b976fc3 186 SUPERFAMILY SSF55811 19 179 2.17E-32 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS09955 abead4e4bba78ed2dcb49ebf6b976fc3 186 Pfam PF00293 NUDIX domain 28 107 2.8E-11 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 Pfam PF00682 HMGL-like 5 273 1.4E-102 T 06-07-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 SMART SM00917 369 500 2.2E-34 T 06-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 SUPERFAMILY SSF51569 1 291 1.83E-98 T 06-07-2017 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 SUPERFAMILY SSF110921 393 499 9.81E-25 T 06-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 06-07-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.8E-32 T 06-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 Gene3D G3DSA:3.20.20.70 1 346 9.4E-143 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 497 8.5E-245 T 06-07-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 06-07-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM402_RS07375 28f8f6d03f4c1b326a5994cf2c24248f 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.704 T 06-07-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 Gene3D G3DSA:3.40.50.1980 25 179 1.2E-55 T 06-07-2017 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00691 Adhesin B signature 57 75 4.1E-43 T 06-07-2017 IPR006129 Adhesin B GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00691 Adhesin B signature 187 204 4.1E-43 T 06-07-2017 IPR006129 Adhesin B GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00691 Adhesin B signature 236 253 4.1E-43 T 06-07-2017 IPR006129 Adhesin B GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00691 Adhesin B signature 258 276 4.1E-43 T 06-07-2017 IPR006129 Adhesin B GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00691 Adhesin B signature 213 231 4.1E-43 T 06-07-2017 IPR006129 Adhesin B GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00691 Adhesin B signature 32 53 4.1E-43 T 06-07-2017 IPR006129 Adhesin B GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00691 Adhesin B signature 279 297 4.1E-43 T 06-07-2017 IPR006129 Adhesin B GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00691 Adhesin B signature 76 95 4.1E-43 T 06-07-2017 IPR006129 Adhesin B GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 SUPERFAMILY SSF53807 29 301 1.42E-94 T 06-07-2017 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00690 Adhesin family signature 63 76 1.5E-46 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00690 Adhesin family signature 266 285 1.5E-46 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00690 Adhesin family signature 240 258 1.5E-46 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00690 Adhesin family signature 187 208 1.5E-46 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00690 Adhesin family signature 76 93 1.5E-46 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 PRINTS PR00690 Adhesin family signature 32 50 1.5E-46 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 298 5.1E-80 T 06-07-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM402_RS13430 35effda5d088127fda72acec8a9997c5 302 Gene3D G3DSA:3.40.50.1980 180 301 7.3E-43 T 06-07-2017 AM402_RS21160 a003eb8da2f615f119eff508f21148e3 255 Gene3D G3DSA:3.40.50.360 5 228 4.9E-98 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS21160 a003eb8da2f615f119eff508f21148e3 255 SUPERFAMILY SSF52218 3 231 4.4E-62 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS21160 a003eb8da2f615f119eff508f21148e3 255 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 29 227 8.1E-112 T 06-07-2017 IPR014063 Arsenate resistance ArsH AM402_RS21160 a003eb8da2f615f119eff508f21148e3 255 Pfam PF03358 NADPH-dependent FMN reductase 36 179 4.1E-26 T 06-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM402_RS01240 3234971dce9e41a8f116685dba45b664 264 Hamap MF_02039 Cell division protein FtsN [ftsN]. 35 264 29.093 T 06-07-2017 IPR011930 Cell division protein FtsN GO:0005515 AM402_RS01240 3234971dce9e41a8f116685dba45b664 264 Gene3D G3DSA:3.30.70.1070 186 261 3.4E-23 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS01240 3234971dce9e41a8f116685dba45b664 264 SUPERFAMILY SSF110997 190 260 4.97E-15 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS01240 3234971dce9e41a8f116685dba45b664 264 Pfam PF05036 Sporulation related domain 192 259 8.8E-11 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 SUPERFAMILY SSF56719 32 484 2.62E-148 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 833 868 5.8E-4 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 650 686 0.41 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 883 934 3.7E-5 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 729 0.0 T 06-07-2017 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 SUPERFAMILY SSF101904 738 979 2.62E-42 T 06-07-2017 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 742 31.805 T 06-07-2017 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 8.1E-129 T 06-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Gene3D G3DSA:3.30.1360.40 239 332 2.7E-23 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 SUPERFAMILY SSF101904 502 719 3.79E-38 T 06-07-2017 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 SMART SM00434 12 462 3.6E-222 T 06-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Gene3D G3DSA:2.120.10.90 496 719 3.4E-34 T 06-07-2017 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Gene3D G3DSA:2.120.10.90 738 968 9.8E-22 T 06-07-2017 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Gene3D G3DSA:3.90.199.10 31 238 7.2E-100 T 06-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05960 01964fe3480e136948a31c87b868a56b 985 Gene3D G3DSA:3.90.199.10 334 398 7.2E-100 T 06-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM402_RS14255 1e58639725c37dc003428b3caa5f7a0f 367 Gene3D G3DSA:2.30.30.280 214 281 5.4E-35 T 06-07-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 AM402_RS14255 1e58639725c37dc003428b3caa5f7a0f 367 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 2.5E-158 T 06-07-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AM402_RS14255 1e58639725c37dc003428b3caa5f7a0f 367 Pfam PF03054 tRNA methyl transferase 7 361 3.0E-147 T 06-07-2017 AM402_RS14255 1e58639725c37dc003428b3caa5f7a0f 367 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 41.3 T 06-07-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AM402_RS14255 1e58639725c37dc003428b3caa5f7a0f 367 SUPERFAMILY SSF52402 5 296 1.21E-58 T 06-07-2017 AM402_RS14255 1e58639725c37dc003428b3caa5f7a0f 367 Gene3D G3DSA:2.40.30.10 283 365 5.4E-33 T 06-07-2017 AM402_RS14255 1e58639725c37dc003428b3caa5f7a0f 367 Gene3D G3DSA:3.40.50.620 4 212 8.2E-100 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS14280 258073ad972c28803fe5f7db4b51c8d0 373 Pfam PF08007 Cupin superfamily protein 9 310 4.2E-100 T 06-07-2017 IPR003347 JmjC domain AM402_RS14280 258073ad972c28803fe5f7db4b51c8d0 373 SMART SM00558 92 215 5.8E-11 T 06-07-2017 IPR003347 JmjC domain AM402_RS14280 258073ad972c28803fe5f7db4b51c8d0 373 Gene3D G3DSA:2.60.120.650 6 206 3.9E-42 T 06-07-2017 AM402_RS14280 258073ad972c28803fe5f7db4b51c8d0 373 SUPERFAMILY SSF51197 6 290 9.2E-74 T 06-07-2017 AM402_RS03550 94ae3fed3cca19844538d53c5f4e9a3c 286 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 9.3E-22 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM402_RS03550 94ae3fed3cca19844538d53c5f4e9a3c 286 Pfam PF01380 SIS domain 132 260 6.4E-25 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS03550 94ae3fed3cca19844538d53c5f4e9a3c 286 SUPERFAMILY SSF46689 2 77 1.34E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS03550 94ae3fed3cca19844538d53c5f4e9a3c 286 SUPERFAMILY SSF53697 102 274 7.59E-42 T 06-07-2017 AM402_RS03550 94ae3fed3cca19844538d53c5f4e9a3c 286 Gene3D G3DSA:3.40.50.10490 106 271 3.3E-40 T 06-07-2017 AM402_RS03550 94ae3fed3cca19844538d53c5f4e9a3c 286 Gene3D G3DSA:1.10.10.10 2 77 5.9E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 SUPERFAMILY SSF53448 7 252 1.08E-63 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 Pfam PF12804 MobA-like NTP transferase domain 8 120 1.7E-20 T 06-07-2017 IPR025877 MobA-like NTP transferase AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 7 455 9.8E-201 T 06-07-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 42.398 T 06-07-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 SUPERFAMILY SSF51161 215 454 9.61E-49 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 Gene3D G3DSA:3.90.550.10 3 249 1.1E-68 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.8E-6 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 299 2.3E-5 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 Gene3D G3DSA:2.160.10.10 333 456 4.8E-32 T 06-07-2017 AM402_RS02275 95b504415f7c1c8a9ce0ae9b991feed7 457 Gene3D G3DSA:2.160.10.10 264 332 1.1E-17 T 06-07-2017 AM402_RS05425 40169b0aa4370f11614b0d705ea62fa2 133 Gene3D G3DSA:3.10.450.50 4 131 4.5E-30 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS05425 40169b0aa4370f11614b0d705ea62fa2 133 Pfam PF07366 SnoaL-like polyketide cyclase 10 131 2.9E-25 T 06-07-2017 IPR009959 Polyketide cyclase SnoaL-like domain AM402_RS05425 40169b0aa4370f11614b0d705ea62fa2 133 SUPERFAMILY SSF54427 3 131 1.74E-31 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS15025 be8388b2d4c682b31c89cca5d416cc51 184 PIRSF PIRSF003093 14 184 1.0E-57 T 06-07-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 AM402_RS15025 be8388b2d4c682b31c89cca5d416cc51 184 Pfam PF03846 Cell division inhibitor SulA 28 129 1.1E-40 T 06-07-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 AM402_RS15025 be8388b2d4c682b31c89cca5d416cc51 184 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 3 184 31.59 T 06-07-2017 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 AM402_RS15025 be8388b2d4c682b31c89cca5d416cc51 184 Gene3D G3DSA:3.40.50.300 42 155 6.9E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15025 be8388b2d4c682b31c89cca5d416cc51 184 SUPERFAMILY SSF52540 42 154 2.92E-28 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14570 af83e91c8edb3e8836e9d7d41376ffa6 94 SUPERFAMILY SSF50715 1 93 5.41E-30 T 06-07-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS14570 af83e91c8edb3e8836e9d7d41376ffa6 94 Pfam PF01386 Ribosomal L25p family 4 91 6.5E-24 T 06-07-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM402_RS14570 af83e91c8edb3e8836e9d7d41376ffa6 94 Gene3D G3DSA:2.40.240.10 2 93 5.7E-33 T 06-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS14570 af83e91c8edb3e8836e9d7d41376ffa6 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 27.285 T 06-07-2017 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM402_RS14570 af83e91c8edb3e8836e9d7d41376ffa6 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 5.0E-34 T 06-07-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 SUPERFAMILY SSF53633 14 299 5.63E-72 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 06-07-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 Gene3D G3DSA:3.30.2130.10 297 352 8.5E-4 T 06-07-2017 AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 Pfam PF00696 Amino acid kinase family 13 285 2.7E-48 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 13 456 2.7E-125 T 06-07-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 13 455 2.2E-131 T 06-07-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 PIRSF PIRSF000726 10 456 1.3E-142 T 06-07-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 SUPERFAMILY SSF55021 305 401 3.88E-18 T 06-07-2017 AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 SUPERFAMILY SSF55021 385 456 2.4E-14 T 06-07-2017 AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 Gene3D G3DSA:3.40.1160.10 12 58 5.5E-59 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS03855 28fc6d9bc1ea65bbf03db327c3d3082c 456 Gene3D G3DSA:3.40.1160.10 93 296 5.5E-59 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 Pfam PF00137 ATP synthase subunit C 11 69 1.0E-9 T 06-07-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.423 T 06-07-2017 AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 Gene3D G3DSA:1.20.20.10 3 77 4.3E-31 T 06-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 06-07-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 2.1E-8 T 06-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 2.1E-8 T 06-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 2.1E-8 T 06-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 06-07-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 AM402_RS02310 04b679186bb6c66dd61e23f8e6e6507e 79 SUPERFAMILY SSF81333 3 77 4.32E-18 T 06-07-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SUPERFAMILY SSF54211 310 503 1.87E-46 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SMART SM00316 631 701 4.3E-28 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 PIRSF PIRSF005499 13 720 1.6E-300 T 06-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Gene3D G3DSA:2.40.50.140 630 704 4.1E-28 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Pfam PF00013 KH domain 567 625 1.1E-9 T 06-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 253 331 3.6E-24 T 06-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SUPERFAMILY SSF50249 619 703 7.37E-23 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Pfam PF01138 3' exoribonuclease family, domain 1 335 467 7.8E-23 T 06-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Pfam PF01138 3' exoribonuclease family, domain 1 27 155 1.5E-17 T 06-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SUPERFAMILY SSF54211 9 155 7.09E-50 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 21 702 0.0 T 06-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SUPERFAMILY SSF46915 250 331 5.49E-19 T 06-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SUPERFAMILY SSF55666 156 246 3.01E-31 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 14 704 30.505 T 06-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Gene3D G3DSA:3.30.230.70 10 236 1.3E-83 T 06-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Gene3D G3DSA:3.30.230.70 325 554 7.2E-88 T 06-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Gene3D G3DSA:3.30.1370.10 563 629 1.0E-25 T 06-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SUPERFAMILY SSF54791 565 633 4.93E-17 T 06-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Gene3D G3DSA:1.10.10.400 237 324 1.4E-25 T 06-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SUPERFAMILY SSF55666 461 560 3.14E-27 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Pfam PF03725 3' exoribonuclease family, domain 2 472 539 6.2E-5 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Pfam PF03725 3' exoribonuclease family, domain 2 158 221 8.5E-12 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 SMART SM00322 563 628 1.4E-12 T 06-07-2017 IPR004087 K Homology domain GO:0003676 AM402_RS00110 a15866d0c21b4b3c65a8b3aad0f2dc00 720 Pfam PF00575 S1 RNA binding domain 630 701 3.9E-22 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS09925 3f654fbb798fd1d8f0074e4ef69b30ac 272 SMART SM00849 21 248 0.0031 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS09925 3f654fbb798fd1d8f0074e4ef69b30ac 272 Pfam PF00753 Metallo-beta-lactamase superfamily 23 87 5.1E-9 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS09925 3f654fbb798fd1d8f0074e4ef69b30ac 272 SUPERFAMILY SSF56281 18 251 1.76E-22 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS09925 3f654fbb798fd1d8f0074e4ef69b30ac 272 Gene3D G3DSA:3.60.15.10 174 252 6.5E-21 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS09925 3f654fbb798fd1d8f0074e4ef69b30ac 272 Gene3D G3DSA:3.60.15.10 3 140 6.5E-21 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18660 6d1150045e741e509b3f527bf12e2fc4 136 SUPERFAMILY SSF55729 35 135 1.13E-24 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS18660 6d1150045e741e509b3f527bf12e2fc4 136 Gene3D G3DSA:3.40.630.30 39 136 4.0E-27 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS18660 6d1150045e741e509b3f527bf12e2fc4 136 Pfam PF00583 Acetyltransferase (GNAT) family 42 115 1.1E-12 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SUPERFAMILY SSF52540 349 462 3.03E-25 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 Pfam PF02559 CarD-like/TRCF domain 476 571 2.1E-25 T 06-07-2017 IPR003711 CarD-like/TRCF domain AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SUPERFAMILY SSF52540 8 341 2.57E-98 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 Gene3D G3DSA:3.30.2060.10 131 204 4.3E-13 T 06-07-2017 AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SUPERFAMILY SSF52540 778 986 1.73E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SMART SM01058 475 572 1.9E-51 T 06-07-2017 IPR003711 CarD-like/TRCF domain AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SMART SM00982 1004 1104 1.9E-46 T 06-07-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SMART SM00487 596 786 1.3E-33 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 147 1078 0.0 T 06-07-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 Pfam PF00270 DEAD/DEAH box helicase 601 761 4.6E-19 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 Pfam PF03461 TRCF domain 1005 1097 2.2E-27 T 06-07-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SUPERFAMILY SSF143517 991 1143 3.53E-44 T 06-07-2017 AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SUPERFAMILY SSF141259 467 544 2.35E-24 T 06-07-2017 IPR003711 CarD-like/TRCF domain AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SUPERFAMILY SSF52540 519 779 8.42E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 Pfam PF00271 Helicase conserved C-terminal domain 801 905 6.3E-18 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1124 28.761 T 06-07-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 SMART SM00490 822 906 5.6E-18 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 Gene3D G3DSA:3.40.50.300 583 782 2.1E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14315 42ebe218cb6fdfbf291bfe90728d13ab 1151 Gene3D G3DSA:3.40.50.300 793 959 5.9E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13045 269075ceade99271e68c4f7aecef3f70 251 Gene3D G3DSA:3.30.1270.10 82 134 3.6E-42 T 06-07-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS13045 269075ceade99271e68c4f7aecef3f70 251 Gene3D G3DSA:3.30.1270.10 212 247 3.6E-42 T 06-07-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS13045 269075ceade99271e68c4f7aecef3f70 251 SUPERFAMILY SSF75625 3 246 2.88E-97 T 06-07-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS13045 269075ceade99271e68c4f7aecef3f70 251 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.806 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS13045 269075ceade99271e68c4f7aecef3f70 251 Gene3D G3DSA:3.30.70.980 135 205 8.8E-30 T 06-07-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS13045 269075ceade99271e68c4f7aecef3f70 251 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.6E-105 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS13045 269075ceade99271e68c4f7aecef3f70 251 Pfam PF01709 Transcriptional regulator 5 236 3.2E-94 T 06-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS13045 269075ceade99271e68c4f7aecef3f70 251 Gene3D G3DSA:1.10.10.200 1 80 1.5E-34 T 06-07-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like AM402_RS06315 fb35c7acc731e953f515ddd4b0175087 196 SUPERFAMILY SSF53098 3 194 7.59E-70 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS06315 fb35c7acc731e953f515ddd4b0175087 196 Gene3D G3DSA:3.30.420.10 10 151 6.3E-48 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS06315 fb35c7acc731e953f515ddd4b0175087 196 Hamap MF_00052_B Ribonuclease HII [rnhB]. 10 189 39.055 T 06-07-2017 IPR022898 Ribonuclease HII GO:0004523 AM402_RS06315 fb35c7acc731e953f515ddd4b0175087 196 Pfam PF01351 Ribonuclease HII 12 188 3.7E-38 T 06-07-2017 IPR024567 Ribonuclease HII/HIII domain AM402_RS03810 b505c31da84f8d245d7102c8a4da8bf6 530 SUPERFAMILY SSF51645 20 529 2.22E-182 T 06-07-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM402_RS03810 b505c31da84f8d245d7102c8a4da8bf6 530 ProSitePatterns PS00510 Malate synthase signature. 265 280 - T 06-07-2017 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM402_RS03810 b505c31da84f8d245d7102c8a4da8bf6 530 Gene3D G3DSA:3.20.20.360 73 410 1.1E-119 T 06-07-2017 AM402_RS03810 b505c31da84f8d245d7102c8a4da8bf6 530 PIRSF PIRSF001363 1 530 8.2E-240 T 06-07-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM402_RS03810 b505c31da84f8d245d7102c8a4da8bf6 530 Pfam PF01274 Malate synthase 12 529 1.9E-195 T 06-07-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM402_RS03810 b505c31da84f8d245d7102c8a4da8bf6 530 Gene3D G3DSA:1.20.1220.12 411 523 1.6E-37 T 06-07-2017 AM402_RS03810 b505c31da84f8d245d7102c8a4da8bf6 530 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 529 2.6E-238 T 06-07-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM402_RS08100 ec79e9484b9f614532b5ca824ecb0a32 338 Gene3D G3DSA:3.40.50.720 3 179 3.2E-52 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08100 ec79e9484b9f614532b5ca824ecb0a32 338 SUPERFAMILY SSF51735 3 336 9.62E-94 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08100 ec79e9484b9f614532b5ca824ecb0a32 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.9E-58 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08100 ec79e9484b9f614532b5ca824ecb0a32 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.1E-141 T 06-07-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AM402_RS08100 ec79e9484b9f614532b5ca824ecb0a32 338 Gene3D G3DSA:3.90.25.10 180 232 1.8E-52 T 06-07-2017 AM402_RS08100 ec79e9484b9f614532b5ca824ecb0a32 338 Gene3D G3DSA:3.90.25.10 264 336 1.8E-52 T 06-07-2017 AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 Pfam PF03466 LysR substrate binding domain 90 291 9.9E-41 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 Gene3D G3DSA:3.40.190.10 93 179 2.8E-24 T 06-07-2017 AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 SUPERFAMILY SSF46785 7 113 1.32E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 Gene3D G3DSA:3.40.190.10 180 259 1.3E-20 T 06-07-2017 AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 Gene3D G3DSA:1.10.10.10 6 84 9.2E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 SUPERFAMILY SSF53850 91 295 8.53E-42 T 06-07-2017 AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.1E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.1E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.1E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14950 d2adb636ab74b96655e0f55f47a6f5ad 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 97 691 2.7E-159 T 06-07-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 SUPERFAMILY SSF51998 169 692 2.41E-185 T 06-07-2017 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 Pfam PF02867 Ribonucleotide reductase, barrel domain 170 687 4.8E-142 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 2.0E-31 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 PRINTS PR01183 Ribonucleotide reductase large chain signature 245 264 2.0E-31 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 598 2.0E-31 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 443 2.0E-31 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 2.0E-31 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 2.0E-31 T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 Gene3D G3DSA:3.20.70.20 344 507 5.9E-54 T 06-07-2017 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 Gene3D G3DSA:3.20.70.20 571 685 5.9E-54 T 06-07-2017 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 Gene3D G3DSA:3.20.70.20 102 291 5.9E-54 T 06-07-2017 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 SUPERFAMILY SSF48168 9 168 6.15E-58 T 06-07-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 560 582 - T 06-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 Pfam PF08343 Ribonucleotide reductase N-terminal 10 91 1.3E-31 T 06-07-2017 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 9 708 0.0 T 06-07-2017 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS16900 e5bea08d7676c8421031a10aa4dad0b1 708 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 94 165 1.6E-11 T 06-07-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS13610 27b593f8f9b482d99447733fd518e54a 73 Pfam PF04325 Protein of unknown function (DUF465) 19 66 6.8E-15 T 06-07-2017 IPR007420 Protein of unknown function DUF465 AM402_RS01220 07f13c5cf6e0bfcee6486ace1672d1c0 105 SUPERFAMILY SSF47598 2 105 5.34E-58 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AM402_RS01220 07f13c5cf6e0bfcee6486ace1672d1c0 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 7.0E-45 T 06-07-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM402_RS01220 07f13c5cf6e0bfcee6486ace1672d1c0 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.108 T 06-07-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM402_RS01220 07f13c5cf6e0bfcee6486ace1672d1c0 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 6.2E-59 T 06-07-2017 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AM402_RS01220 07f13c5cf6e0bfcee6486ace1672d1c0 105 Gene3D G3DSA:1.10.140.10 2 105 1.4E-64 T 06-07-2017 IPR023453 Methionine repressor MetJ domain AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 Gene3D G3DSA:3.30.230.10 590 771 2.5E-78 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 Gene3D G3DSA:3.40.50.300 312 499 1.2E-32 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 SUPERFAMILY SSF54211 595 770 6.07E-59 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.585 T 06-07-2017 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 06-07-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 SUPERFAMILY SSF52540 313 587 1.31E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.8E-43 T 06-07-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 06-07-2017 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 3.0E-57 T 06-07-2017 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 3.0E-57 T 06-07-2017 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 3.0E-57 T 06-07-2017 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 3.0E-57 T 06-07-2017 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 3.0E-57 T 06-07-2017 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.1E-96 T 06-07-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 PIRSF PIRSF001174 1 775 0.0 T 06-07-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 SMART SM00382 348 492 5.3E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 3.2E-17 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 SMART SM00464 10 202 2.6E-81 T 06-07-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 SUPERFAMILY SSF88697 10 201 2.39E-51 T 06-07-2017 IPR015947 PUA-like domain AM402_RS18860 d369b0ea784ce2cc5ffbe20be7d92614 784 Gene3D G3DSA:1.10.8.60 500 583 5.0E-34 T 06-07-2017 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 Gene3D G3DSA:3.50.30.10 377 473 6.2E-36 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 06-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 SUPERFAMILY SSF51621 465 790 7.85E-96 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 PIRSF PIRSF000854 7 791 0.0 T 06-07-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 4.7E-119 T 06-07-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 417 428 - T 06-07-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 Gene3D G3DSA:3.30.1490.20 10 198 4.5E-68 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 4.8E-26 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 SUPERFAMILY SSF52009 351 470 3.14E-35 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 485 790 8.5E-59 T 06-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 790 0.0 T 06-07-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 Gene3D G3DSA:3.30.470.20 200 353 1.9E-60 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 Gene3D G3DSA:3.20.20.60 485 790 1.2E-103 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS11215 c8a91f5891cca7f03dbacc32defe414e 791 SUPERFAMILY SSF56059 10 386 6.8E-109 T 06-07-2017 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 Pfam PF00771 FHIPEP family 24 691 7.4E-216 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 PIRSF PIRSF005419 1 699 7.3E-212 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 135 158 - T 06-07-2017 IPR025505 FHIPEP conserved site AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 12 699 4.6E-244 T 06-07-2017 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 179 196 4.7E-56 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 230 244 4.7E-56 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 87 4.7E-56 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 149 167 4.7E-56 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 130 146 4.7E-56 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS04160 3dff7f794487d07d9531f8c5c04c1a6c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 31 44 4.7E-56 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS10940 c3cc9aaa426bd0c372069e11364edb2d 546 Gene3D G3DSA:3.10.105.10 300 513 8.4E-61 T 06-07-2017 AM402_RS10940 c3cc9aaa426bd0c372069e11364edb2d 546 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 06-07-2017 IPR023765 Solute-binding protein family 5, conserved site AM402_RS10940 c3cc9aaa426bd0c372069e11364edb2d 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 463 9.1E-89 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS10940 c3cc9aaa426bd0c372069e11364edb2d 546 SUPERFAMILY SSF53850 37 527 1.32E-142 T 06-07-2017 AM402_RS10940 c3cc9aaa426bd0c372069e11364edb2d 546 Gene3D G3DSA:3.90.76.10 50 224 3.3E-51 T 06-07-2017 AM402_RS10940 c3cc9aaa426bd0c372069e11364edb2d 546 PIRSF PIRSF002741 3 546 2.6E-110 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM402_RS00660 f5f2f99d88bb6459ce7dcd5e8a3e5bf0 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 340 1.9E-157 T 06-07-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AM402_RS00660 f5f2f99d88bb6459ce7dcd5e8a3e5bf0 355 SUPERFAMILY SSF51735 3 339 2.43E-94 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00660 f5f2f99d88bb6459ce7dcd5e8a3e5bf0 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 1.6E-96 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00660 f5f2f99d88bb6459ce7dcd5e8a3e5bf0 355 Gene3D G3DSA:3.90.25.10 193 339 1.5E-54 T 06-07-2017 AM402_RS00660 f5f2f99d88bb6459ce7dcd5e8a3e5bf0 355 Gene3D G3DSA:3.40.50.720 2 192 1.5E-66 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12320 b8f14bcc275469b3ebd39ebc597c6852 104 SUPERFAMILY SSF54909 1 100 8.67E-23 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS12320 b8f14bcc275469b3ebd39ebc597c6852 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 5.0E-10 T 06-07-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain AM402_RS12320 b8f14bcc275469b3ebd39ebc597c6852 104 Gene3D G3DSA:3.30.70.900 1 95 2.1E-15 T 06-07-2017 AM402_RS15335 41dc27a4002d2dd8c0bfb1df7236b451 216 SMART SM00849 12 193 7.0E-35 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS15335 41dc27a4002d2dd8c0bfb1df7236b451 216 SUPERFAMILY SSF56281 1 210 4.85E-56 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS15335 41dc27a4002d2dd8c0bfb1df7236b451 216 Gene3D G3DSA:3.60.15.10 1 211 1.1E-57 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS15335 41dc27a4002d2dd8c0bfb1df7236b451 216 Pfam PF00753 Metallo-beta-lactamase superfamily 12 193 1.0E-31 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS05705 4da197950cb36604b64f45548f3198b4 135 PRINTS PR01374 Gram-negative bacterial tonB protein signature 46 67 7.0E-9 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM402_RS05705 4da197950cb36604b64f45548f3198b4 135 PRINTS PR01374 Gram-negative bacterial tonB protein signature 67 85 7.0E-9 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM402_RS05705 4da197950cb36604b64f45548f3198b4 135 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 52 123 1.2E-10 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS05705 4da197950cb36604b64f45548f3198b4 135 SUPERFAMILY SSF74653 47 111 5.36E-13 T 06-07-2017 AM402_RS05705 4da197950cb36604b64f45548f3198b4 135 Gene3D G3DSA:3.30.1150.10 49 125 7.1E-7 T 06-07-2017 AM402_RS05705 4da197950cb36604b64f45548f3198b4 135 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 52 122 1.1E-11 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 6 538 1.9E-282 T 06-07-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 SUPERFAMILY SSF53795 228 538 1.24E-129 T 06-07-2017 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 06-07-2017 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 491 1.8E-212 T 06-07-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 SUPERFAMILY SSF68923 9 226 5.06E-92 T 06-07-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 15 537 55.682 T 06-07-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 Gene3D G3DSA:3.40.449.10 21 226 4.2E-89 T 06-07-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 Gene3D G3DSA:3.90.228.20 227 289 2.2E-122 T 06-07-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 Gene3D G3DSA:3.90.228.20 350 538 2.2E-122 T 06-07-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM402_RS02540 b117fd675d149a2919168f12c58fae79 539 PIRSF PIRSF006294 3 539 1.0E-232 T 06-07-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM402_RS20315 ca1b8b9d81d924ea2fe100cd2cb3c884 545 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 444 8.6E-180 T 06-07-2017 IPR010232 Probable protein kinase UbiB GO:0006744 AM402_RS20315 ca1b8b9d81d924ea2fe100cd2cb3c884 545 SUPERFAMILY SSF56112 94 158 5.41E-52 T 06-07-2017 IPR011009 Protein kinase-like domain AM402_RS20315 ca1b8b9d81d924ea2fe100cd2cb3c884 545 SUPERFAMILY SSF56112 192 434 5.41E-52 T 06-07-2017 IPR011009 Protein kinase-like domain AM402_RS20315 ca1b8b9d81d924ea2fe100cd2cb3c884 545 Gene3D G3DSA:3.30.200.20 129 156 6.5E-4 T 06-07-2017 AM402_RS20315 ca1b8b9d81d924ea2fe100cd2cb3c884 545 Gene3D G3DSA:3.30.200.20 191 226 6.5E-4 T 06-07-2017 AM402_RS20315 ca1b8b9d81d924ea2fe100cd2cb3c884 545 Pfam PF03109 ABC1 family 112 230 1.9E-36 T 06-07-2017 IPR004147 UbiB domain AM402_RS20315 ca1b8b9d81d924ea2fe100cd2cb3c884 545 Gene3D G3DSA:3.90.1200.10 245 295 2.7E-4 T 06-07-2017 AM402_RS20315 ca1b8b9d81d924ea2fe100cd2cb3c884 545 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 538 56.966 T 06-07-2017 IPR010232 Probable protein kinase UbiB GO:0006744 AM402_RS09495 00fe1a6aad0aff306945c7d7316dba4f 259 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 232 1.8E-31 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM402_RS09495 00fe1a6aad0aff306945c7d7316dba4f 259 Pfam PF02567 Phenazine biosynthesis-like protein 9 255 2.1E-50 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM402_RS09495 00fe1a6aad0aff306945c7d7316dba4f 259 Gene3D G3DSA:3.10.310.10 1 120 6.9E-38 T 06-07-2017 AM402_RS09495 00fe1a6aad0aff306945c7d7316dba4f 259 Gene3D G3DSA:3.10.310.10 121 247 3.5E-38 T 06-07-2017 AM402_RS09495 00fe1a6aad0aff306945c7d7316dba4f 259 PIRSF PIRSF016184 1 259 5.0E-51 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM402_RS09495 00fe1a6aad0aff306945c7d7316dba4f 259 SUPERFAMILY SSF54506 3 258 2.2E-67 T 06-07-2017 AM402_RS12640 7f53a245662a3d3dc83108067388320b 227 SMART SM00448 4 114 1.8E-38 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS12640 7f53a245662a3d3dc83108067388320b 227 SUPERFAMILY SSF46894 125 226 4.25E-27 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS12640 7f53a245662a3d3dc83108067388320b 227 SMART SM00862 149 225 1.2E-19 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS12640 7f53a245662a3d3dc83108067388320b 227 Pfam PF00072 Response regulator receiver domain 6 115 3.0E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS12640 7f53a245662a3d3dc83108067388320b 227 SUPERFAMILY SSF52172 3 130 9.96E-38 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS12640 7f53a245662a3d3dc83108067388320b 227 Gene3D G3DSA:1.10.10.10 127 226 9.5E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12640 7f53a245662a3d3dc83108067388320b 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.8E-19 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS12640 7f53a245662a3d3dc83108067388320b 227 Gene3D G3DSA:3.40.50.2300 3 126 6.5E-37 T 06-07-2017 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 Gene3D G3DSA:3.20.20.70 4 359 2.7E-123 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 639 1.0E-22 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 SUPERFAMILY SSF51395 2 367 7.57E-113 T 06-07-2017 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 1.4E-10 T 06-07-2017 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 618 634 1.4E-10 T 06-07-2017 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 1.4E-10 T 06-07-2017 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 SUPERFAMILY SSF51905 354 635 2.07E-37 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 Gene3D G3DSA:3.50.50.60 471 625 1.6E-38 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 Gene3D G3DSA:3.50.50.60 360 464 2.5E-25 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS19495 948bded9e866e1a355008d25bc8ee667 672 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 1.3E-88 T 06-07-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 429 2.8E-71 T 06-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 Gene3D G3DSA:1.20.1250.20 256 464 1.3E-13 T 06-07-2017 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 Pfam PF07690 Major Facilitator Superfamily 16 405 2.5E-43 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 Gene3D G3DSA:1.20.1250.20 13 185 3.2E-26 T 06-07-2017 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.5E-7 T 06-07-2017 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.5E-7 T 06-07-2017 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 4.5E-7 T 06-07-2017 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.5E-7 T 06-07-2017 AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 SUPERFAMILY SSF103473 13 194 9.02E-62 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS02365 c88feb3cdfcd3517fede0d38defab973 465 SUPERFAMILY SSF103473 244 451 9.02E-62 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 304 471 1.0E-39 T 06-07-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 467 545 5.7E-11 T 06-07-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 224 235 - T 06-07-2017 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 SUPERFAMILY SSF143243 19 202 9.42E-44 T 06-07-2017 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 Pfam PF00374 Nickel-dependent hydrogenase 226 294 6.1E-13 T 06-07-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 96 160 5.0E-26 T 06-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 45 161 3.4E-20 T 06-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 SUPERFAMILY SSF56762 201 545 1.96E-110 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 Gene3D G3DSA:1.10.645.10 413 544 5.3E-33 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05060 489a88cc7a9d81b824d2cbbdd31834d6 577 Gene3D G3DSA:1.10.645.10 174 412 7.4E-57 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 Gene3D G3DSA:1.10.260.40 1 50 2.4E-23 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 SUPERFAMILY SSF47413 1 53 1.46E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 1.6E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 Pfam PF13377 Periplasmic binding protein-like domain 167 327 2.0E-42 T 06-07-2017 AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 SMART SM00354 1 68 2.0E-28 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 06-07-2017 AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 Gene3D G3DSA:3.40.50.2300 51 173 1.2E-41 T 06-07-2017 AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 SUPERFAMILY SSF53822 57 328 1.71E-91 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS19005 108fe690e0a35f84f7ad7ced7d3156f0 332 Gene3D G3DSA:3.40.50.2300 174 306 2.6E-53 T 06-07-2017 AM402_RS15390 c0b59c1d7f3ac94544809fce7f6850c3 59 Pfam PF03966 Trm112p-like protein 2 40 1.0E-8 T 06-07-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 AM402_RS15390 c0b59c1d7f3ac94544809fce7f6850c3 59 Gene3D G3DSA:2.20.25.10 8 58 7.7E-24 T 06-07-2017 AM402_RS15390 c0b59c1d7f3ac94544809fce7f6850c3 59 SUPERFAMILY SSF158997 1 54 3.01E-20 T 06-07-2017 AM402_RS15390 c0b59c1d7f3ac94544809fce7f6850c3 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.664 T 06-07-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 Gene3D G3DSA:3.30.565.10 513 676 1.3E-19 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 Gene3D G3DSA:1.20.120.160 815 896 7.2E-21 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 8 897 23.084 T 06-07-2017 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 SUPERFAMILY SSF47226 815 896 8.11E-17 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 557 669 4.5E-11 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 Pfam PF01627 Hpt domain 818 896 2.6E-8 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 SMART SM00387 557 671 1.4E-9 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 SUPERFAMILY SSF55874 500 673 1.31E-18 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09280 1d00939a772029b8e72af1c41a58d845 897 Pfam PF16359 RcsD-ABL domain 682 781 1.2E-34 T 06-07-2017 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain AM402_RS21850 8dff0c3cb0f296f57ebdbbc8d73b5a59 571 Gene3D G3DSA:1.10.10.60 107 171 6.9E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS21850 8dff0c3cb0f296f57ebdbbc8d73b5a59 571 Gene3D G3DSA:3.30.420.10 188 385 6.2E-25 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21850 8dff0c3cb0f296f57ebdbbc8d73b5a59 571 Pfam PF00665 Integrase core domain 186 324 2.4E-24 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS21850 8dff0c3cb0f296f57ebdbbc8d73b5a59 571 SUPERFAMILY SSF53098 182 380 1.23E-20 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21850 8dff0c3cb0f296f57ebdbbc8d73b5a59 571 Pfam PF09299 Mu transposase, C-terminal 405 467 3.5E-12 T 06-07-2017 IPR015378 Transposase-like, Mu, C-terminal AM402_RS21850 8dff0c3cb0f296f57ebdbbc8d73b5a59 571 Pfam PF13518 Helix-turn-helix domain 38 96 1.1E-9 T 06-07-2017 AM402_RS19710 5d05b92552f59af7badbbff98dd03739 209 Pfam PF05494 MlaC protein 31 196 1.0E-53 T 06-07-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM402_RS19710 5d05b92552f59af7badbbff98dd03739 209 PIRSF PIRSF004649 1 209 1.3E-57 T 06-07-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM402_RS19710 5d05b92552f59af7badbbff98dd03739 209 Gene3D G3DSA:3.10.450.50 112 170 1.9E-18 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS19710 5d05b92552f59af7badbbff98dd03739 209 Gene3D G3DSA:3.10.450.50 24 68 1.9E-18 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS19710 5d05b92552f59af7badbbff98dd03739 209 Gene3D G3DSA:1.10.10.640 69 109 1.2E-21 T 06-07-2017 IPR023094 Toluene tolerance protein, alpha-helical AM402_RS19710 5d05b92552f59af7badbbff98dd03739 209 Gene3D G3DSA:1.10.10.640 171 198 1.2E-21 T 06-07-2017 IPR023094 Toluene tolerance protein, alpha-helical AM402_RS07535 7cd60e41852b8d6bf2baf754a42700f2 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 1.0E-7 T 06-07-2017 IPR003004 GspF/PilC family AM402_RS07535 7cd60e41852b8d6bf2baf754a42700f2 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 1.0E-7 T 06-07-2017 IPR003004 GspF/PilC family AM402_RS07535 7cd60e41852b8d6bf2baf754a42700f2 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 1.0E-7 T 06-07-2017 IPR003004 GspF/PilC family AM402_RS07535 7cd60e41852b8d6bf2baf754a42700f2 399 Pfam PF00482 Type II secretion system (T2SS), protein F 271 390 4.2E-20 T 06-07-2017 IPR018076 Type II secretion system F domain AM402_RS07535 7cd60e41852b8d6bf2baf754a42700f2 399 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 9.8E-21 T 06-07-2017 IPR018076 Type II secretion system F domain AM402_RS06500 7c66dfbf0af664931953ba26b94b484a 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 3.2E-74 T 06-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AM402_RS06500 7c66dfbf0af664931953ba26b94b484a 254 SUPERFAMILY SSF64167 2 249 1.07E-82 T 06-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AM402_RS06500 7c66dfbf0af664931953ba26b94b484a 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 39.388 T 06-07-2017 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AM402_RS06500 7c66dfbf0af664931953ba26b94b484a 254 Gene3D G3DSA:3.40.1210.10 3 251 7.4E-87 T 06-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AM402_RS06500 7c66dfbf0af664931953ba26b94b484a 254 Pfam PF01975 Survival protein SurE 4 182 1.1E-57 T 06-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AM402_RS17550 0b904cd3e1ebf58db27747d1a7b302b4 481 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 51 474 5.9E-155 T 06-07-2017 IPR021204 Integrating conjugative element protein, PFL4711 AM402_RS10295 23708c63d2103be56be2439aa7a6592f 398 Pfam PF00589 Phage integrase family 204 373 4.8E-23 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS10295 23708c63d2103be56be2439aa7a6592f 398 Gene3D G3DSA:1.10.443.10 202 382 2.6E-29 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS10295 23708c63d2103be56be2439aa7a6592f 398 Pfam PF13356 Domain of unknown function (DUF4102) 2 87 9.3E-14 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 AM402_RS10295 23708c63d2103be56be2439aa7a6592f 398 SUPERFAMILY SSF56349 99 384 1.8E-61 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS10295 23708c63d2103be56be2439aa7a6592f 398 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 145 1.6E-5 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS10295 23708c63d2103be56be2439aa7a6592f 398 Gene3D G3DSA:1.10.150.130 99 191 9.6E-18 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS19870 485a6ba28e8f27640c67d4ecb97e75e3 82 Pfam PF06196 Protein of unknown function (DUF997) 7 77 3.0E-28 T 06-07-2017 IPR010398 Protein of unknown function DUF997 AM402_RS19870 485a6ba28e8f27640c67d4ecb97e75e3 82 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 78 3.0E-18 T 06-07-2017 IPR010398 Protein of unknown function DUF997 AM402_RS11755 c5a47282bdb0727201360af91caae0a6 135 SUPERFAMILY SSF54593 1 127 5.64E-36 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM402_RS11755 c5a47282bdb0727201360af91caae0a6 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 06-07-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM402_RS11755 c5a47282bdb0727201360af91caae0a6 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 06-07-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM402_RS11755 c5a47282bdb0727201360af91caae0a6 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 8.2E-26 T 06-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM402_RS11755 c5a47282bdb0727201360af91caae0a6 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 3.2E-68 T 06-07-2017 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM402_RS11755 c5a47282bdb0727201360af91caae0a6 135 Gene3D G3DSA:3.10.180.10 1 128 6.3E-48 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM402_RS17225 a9736d7d75111bebc2c8d84ae8f29c32 340 Pfam PF02424 ApbE family 34 315 2.3E-83 T 06-07-2017 IPR024932 Flavin transferase ApbE GO:0017013 AM402_RS17225 a9736d7d75111bebc2c8d84ae8f29c32 340 SUPERFAMILY SSF143631 27 338 8.63E-101 T 06-07-2017 IPR003374 ApbE-like domain AM402_RS17225 a9736d7d75111bebc2c8d84ae8f29c32 340 PIRSF PIRSF006268 2 340 2.4E-90 T 06-07-2017 IPR024932 Flavin transferase ApbE GO:0017013 AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 Gene3D G3DSA:3.40.250.10 4 130 1.0E-32 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 SUPERFAMILY SSF52540 142 180 7.9E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 SUPERFAMILY SSF52540 220 247 7.9E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 SUPERFAMILY SSF52821 94 155 1.3E-22 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 SUPERFAMILY SSF52821 4 66 1.3E-22 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 SMART SM00450 4 134 1.5E-11 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 Gene3D G3DSA:3.40.50.300 131 163 7.7E-4 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 362 46.721 T 06-07-2017 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AM402_RS12400 6e1557c7c0bb00f6e14d956511e0a229 362 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 345 5.1E-101 T 06-07-2017 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AM402_RS07650 66481b537a316e1bfba156604765ce71 205 SUPERFAMILY SSF100950 9 199 2.23E-58 T 06-07-2017 AM402_RS07650 66481b537a316e1bfba156604765ce71 205 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 191 1.3E-46 T 06-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM402_RS07650 66481b537a316e1bfba156604765ce71 205 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 191 6.9E-57 T 06-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM402_RS07650 66481b537a316e1bfba156604765ce71 205 PIRSF PIRSF006806 5 194 2.9E-42 T 06-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM402_RS07650 66481b537a316e1bfba156604765ce71 205 Gene3D G3DSA:3.40.50.10420 10 198 1.8E-59 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AM402_RS11180 2d1e2d6752878d8c550bd6b698098f7e 271 Pfam PF01497 Periplasmic binding protein 23 247 4.3E-26 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM402_RS11180 2d1e2d6752878d8c550bd6b698098f7e 271 Gene3D G3DSA:3.40.50.1980 21 139 2.7E-25 T 06-07-2017 AM402_RS11180 2d1e2d6752878d8c550bd6b698098f7e 271 Gene3D G3DSA:3.40.50.1980 142 269 7.6E-17 T 06-07-2017 AM402_RS11180 2d1e2d6752878d8c550bd6b698098f7e 271 SUPERFAMILY SSF53807 21 267 1.18E-48 T 06-07-2017 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 06-07-2017 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 SUPERFAMILY SSF54211 3 204 6.68E-65 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 Pfam PF08544 GHMP kinases C terminal 279 362 8.9E-10 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 SUPERFAMILY SSF55060 207 382 4.32E-52 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PIRSF PIRSF000530 1 385 5.5E-128 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PRINTS PR00959 Mevalonate kinase family signature 26 50 1.6E-45 T 06-07-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PRINTS PR00959 Mevalonate kinase family signature 163 182 1.6E-45 T 06-07-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PRINTS PR00959 Mevalonate kinase family signature 120 142 1.6E-45 T 06-07-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PRINTS PR00959 Mevalonate kinase family signature 329 346 1.6E-45 T 06-07-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 TIGRFAM TIGR00131 gal_kin: galactokinase 6 382 7.0E-148 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 Hamap MF_00246 Galactokinase [galK]. 26 382 42.844 T 06-07-2017 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 Pfam PF00288 GHMP kinases N terminal domain 115 182 6.1E-13 T 06-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 Pfam PF10509 Galactokinase galactose-binding signature 11 59 1.8E-22 T 06-07-2017 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 06-07-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 Gene3D G3DSA:3.30.70.890 209 381 8.1E-61 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PRINTS PR00473 Galactokinase signature 93 104 1.6E-30 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PRINTS PR00473 Galactokinase signature 113 131 1.6E-30 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PRINTS PR00473 Galactokinase signature 264 278 1.6E-30 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 PRINTS PR00473 Galactokinase signature 28 46 1.6E-30 T 06-07-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AM402_RS08110 4a2f45c0a6c46e1200d178bedd9af051 390 Gene3D G3DSA:3.30.230.10 4 208 3.3E-78 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS13110 3b308ab66b257061b0a62283aa3d3bf1 193 SUPERFAMILY SSF55729 12 185 7.83E-40 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS13110 3b308ab66b257061b0a62283aa3d3bf1 193 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 6.2E-17 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS13110 3b308ab66b257061b0a62283aa3d3bf1 193 Gene3D G3DSA:3.40.630.30 9 186 1.1E-40 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 SUPERFAMILY SSF52540 202 273 3.73E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 SUPERFAMILY SSF52540 300 454 3.73E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 SMART SM00382 221 427 1.5E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 SUPERFAMILY SSF48024 23 134 8.76E-39 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 Pfam PF00772 DnaB-like helicase N terminal domain 25 126 3.7E-37 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 Gene3D G3DSA:3.40.50.300 188 462 3.3E-105 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 Gene3D G3DSA:1.10.860.10 25 127 4.2E-41 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 462 1.8E-176 T 06-07-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM402_RS03925 2da773de5bc288fe1fac1ce7a1e4a76d 469 Pfam PF03796 DnaB-like helicase C terminal domain 204 460 3.2E-114 T 06-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM402_RS16650 e04de45f77b265bfa6825c088e2b5adb 333 Pfam PF00589 Phage integrase family 175 324 4.7E-19 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS16650 e04de45f77b265bfa6825c088e2b5adb 333 SUPERFAMILY SSF54171 12 56 2.48E-12 T 06-07-2017 IPR016177 DNA-binding domain GO:0003677 AM402_RS16650 e04de45f77b265bfa6825c088e2b5adb 333 Gene3D G3DSA:1.10.443.10 172 326 3.2E-30 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS16650 e04de45f77b265bfa6825c088e2b5adb 333 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 72 127 8.9E-7 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS16650 e04de45f77b265bfa6825c088e2b5adb 333 Gene3D G3DSA:1.10.150.130 72 169 1.4E-26 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS16650 e04de45f77b265bfa6825c088e2b5adb 333 SUPERFAMILY SSF56349 71 324 1.03E-51 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS16650 e04de45f77b265bfa6825c088e2b5adb 333 Gene3D G3DSA:3.30.160.60 1 58 3.7E-20 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AM402_RS16650 e04de45f77b265bfa6825c088e2b5adb 333 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 1 64 7.3E-13 T 06-07-2017 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 AM402_RS12930 9aa8b9a6c22473a1becb67cfd4ac550b 233 SUPERFAMILY SSF63848 127 232 6.8E-32 T 06-07-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM402_RS12930 9aa8b9a6c22473a1becb67cfd4ac550b 233 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 8.2E-31 T 06-07-2017 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AM402_RS12930 9aa8b9a6c22473a1becb67cfd4ac550b 233 Gene3D G3DSA:2.160.20.70 114 232 3.2E-39 T 06-07-2017 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AM402_RS12930 9aa8b9a6c22473a1becb67cfd4ac550b 233 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 129 230 1.2E-31 T 06-07-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM402_RS12930 9aa8b9a6c22473a1becb67cfd4ac550b 233 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 232 1.6E-71 T 06-07-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM402_RS12930 9aa8b9a6c22473a1becb67cfd4ac550b 233 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 233 28.941 T 06-07-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM402_RS10945 6e4cbb171b6ef6a4d4a35a5fa7bb2c70 545 Gene3D G3DSA:3.10.105.10 311 513 5.3E-60 T 06-07-2017 AM402_RS10945 6e4cbb171b6ef6a4d4a35a5fa7bb2c70 545 PIRSF PIRSF002741 4 545 7.5E-107 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM402_RS10945 6e4cbb171b6ef6a4d4a35a5fa7bb2c70 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 465 1.3E-84 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS10945 6e4cbb171b6ef6a4d4a35a5fa7bb2c70 545 Gene3D G3DSA:3.40.190.10 160 310 1.6E-55 T 06-07-2017 AM402_RS10945 6e4cbb171b6ef6a4d4a35a5fa7bb2c70 545 SUPERFAMILY SSF53850 37 527 2.53E-142 T 06-07-2017 AM402_RS10945 6e4cbb171b6ef6a4d4a35a5fa7bb2c70 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 06-07-2017 IPR023765 Solute-binding protein family 5, conserved site AM402_RS01940 e62942dfac43ceb74dc315d62439c9dc 309 Pfam PF00149 Calcineurin-like phosphoesterase 10 250 7.5E-11 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AM402_RS01940 e62942dfac43ceb74dc315d62439c9dc 309 Gene3D G3DSA:3.60.21.10 5 251 1.0E-26 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS01940 e62942dfac43ceb74dc315d62439c9dc 309 SUPERFAMILY SSF56300 7 282 3.8E-26 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.4E-44 T 06-07-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 2.9E-154 T 06-07-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.3E-7 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 204 1.3E-82 T 06-07-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 Pfam PF02540 NAD synthase 216 257 9.3E-5 T 06-07-2017 IPR022310 NAD/GMP synthase AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 2.0E-40 T 06-07-2017 IPR017926 Glutamine amidotransferase AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.5E-6 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.5E-6 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.5E-6 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 Gene3D G3DSA:3.30.300.10 401 525 2.4E-53 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.9E-6 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.9E-6 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.9E-6 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 Gene3D G3DSA:3.40.50.620 224 399 1.5E-54 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.103 T 06-07-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 Gene3D G3DSA:3.40.50.880 4 223 4.5E-61 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 SUPERFAMILY SSF52317 5 204 1.68E-55 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 SUPERFAMILY SSF52402 197 420 3.31E-56 T 06-07-2017 AM402_RS10285 7a7409daa986ae05b033b9c70c5097a7 525 SUPERFAMILY SSF54810 405 525 2.35E-51 T 06-07-2017 AM402_RS19025 57ddf7d5df9c151f299ac90daa1de5dc 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 4.8E-56 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS19025 57ddf7d5df9c151f299ac90daa1de5dc 156 Gene3D G3DSA:3.40.50.960 2 152 3.7E-64 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS19025 57ddf7d5df9c151f299ac90daa1de5dc 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.936 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS19025 57ddf7d5df9c151f299ac90daa1de5dc 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 7.9E-60 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS19025 57ddf7d5df9c151f299ac90daa1de5dc 156 SUPERFAMILY SSF52121 3 154 5.89E-61 T 06-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS11230 dd636f7cd0b2fcc3691126643f8dfa74 137 SUPERFAMILY SSF54637 1 133 1.68E-29 T 06-07-2017 IPR029069 HotDog domain AM402_RS11230 dd636f7cd0b2fcc3691126643f8dfa74 137 Gene3D G3DSA:3.10.129.10 1 136 3.3E-49 T 06-07-2017 IPR029069 HotDog domain AM402_RS11230 dd636f7cd0b2fcc3691126643f8dfa74 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 135 7.5E-44 T 06-07-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 AM402_RS11230 dd636f7cd0b2fcc3691126643f8dfa74 137 Pfam PF03061 Thioesterase superfamily 50 127 1.0E-15 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AM402_RS16925 b003c70a9d893d22eb66f188e1094716 797 Pfam PF07715 TonB-dependent Receptor Plug Domain 104 201 2.5E-13 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS16925 b003c70a9d893d22eb66f188e1094716 797 Gene3D G3DSA:2.40.170.20 208 793 8.5E-69 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS16925 b003c70a9d893d22eb66f188e1094716 797 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 83 797 3.1E-102 T 06-07-2017 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM402_RS16925 b003c70a9d893d22eb66f188e1094716 797 Pfam PF00593 TonB dependent receptor 522 793 2.9E-17 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS16925 b003c70a9d893d22eb66f188e1094716 797 Gene3D G3DSA:2.170.130.10 105 207 4.0E-25 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS16925 b003c70a9d893d22eb66f188e1094716 797 SUPERFAMILY SSF56935 80 797 1.79E-82 T 06-07-2017 AM402_RS16925 b003c70a9d893d22eb66f188e1094716 797 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 99 797 2.3E-130 T 06-07-2017 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM402_RS04760 e2436e2de5b92d717a108719a2fced5c 79 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 79 1.4E-29 T 06-07-2017 IPR021676 Protein of unknown function DUF3262 AM402_RS04760 e2436e2de5b92d717a108719a2fced5c 79 Pfam PF11660 Protein of unknown function (DUF3262) 1 78 2.1E-30 T 06-07-2017 IPR021676 Protein of unknown function DUF3262 AM402_RS00935 e16531701651baa9a45337d0d7f6a931 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-29 T 06-07-2017 AM402_RS00935 e16531701651baa9a45337d0d7f6a931 130 SUPERFAMILY SSF56047 5 129 3.4E-46 T 06-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00935 e16531701651baa9a45337d0d7f6a931 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.434 T 06-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00935 e16531701651baa9a45337d0d7f6a931 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 06-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00935 e16531701651baa9a45337d0d7f6a931 130 Gene3D G3DSA:3.30.1490.10 74 129 2.0E-27 T 06-07-2017 AM402_RS00935 e16531701651baa9a45337d0d7f6a931 130 Pfam PF00410 Ribosomal protein S8 5 129 1.8E-48 T 06-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 SUPERFAMILY SSF58104 223 504 1.27E-61 T 06-07-2017 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 SMART SM00283 256 503 2.8E-63 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 277 306 2.9E-48 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 354 381 2.9E-48 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 412 2.9E-48 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 431 460 2.9E-48 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 180 200 2.9E-48 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 Gene3D G3DSA:1.10.287.950 271 475 3.0E-51 T 06-07-2017 AM402_RS05770 f02a78a874f72c496b191f0126988337 522 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 502 5.4E-47 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 SMART SM00487 9 425 1.9E-28 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Gene3D G3DSA:4.10.860.10 626 667 3.6E-17 T 06-07-2017 IPR001943 UVR domain GO:0005515 AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 SMART SM00490 460 546 8.9E-20 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Gene3D G3DSA:3.40.50.300 419 582 1.3E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Gene3D G3DSA:3.40.50.300 388 408 1.9E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Gene3D G3DSA:3.40.50.300 278 338 1.9E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Gene3D G3DSA:3.40.50.300 5 89 1.9E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 SUPERFAMILY SSF52540 4 415 2.39E-137 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Pfam PF00271 Helicase conserved C-terminal domain 435 545 7.7E-19 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Pfam PF04851 Type III restriction enzyme, res subunit 15 137 6.2E-9 T 06-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Pfam PF02151 UvrB/uvrC motif 629 664 3.2E-7 T 06-07-2017 IPR001943 UVR domain GO:0005515 AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 662 0.0 T 06-07-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Gene3D G3DSA:3.30.2060.10 159 230 4.5E-11 T 06-07-2017 AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 664 44.183 T 06-07-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 SUPERFAMILY SSF46600 617 665 7.59E-12 T 06-07-2017 IPR001943 UVR domain GO:0005515 AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.4E-20 T 06-07-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 SUPERFAMILY SSF52540 459 581 3.9E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15945 6cf632b47825b5925e09b975fe48345f 669 SUPERFAMILY SSF52540 37 82 3.9E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17320 7baf7fe9a088b936f86351f4806a6e9f 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 38.919 T 06-07-2017 IPR003774 Protein of unknown function UPF0301 AM402_RS17320 7baf7fe9a088b936f86351f4806a6e9f 187 SUPERFAMILY SSF143456 2 187 7.59E-63 T 06-07-2017 AM402_RS17320 7baf7fe9a088b936f86351f4806a6e9f 187 Gene3D G3DSA:3.30.70.1300 41 130 2.5E-27 T 06-07-2017 AM402_RS17320 7baf7fe9a088b936f86351f4806a6e9f 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.1E-48 T 06-07-2017 IPR003774 Protein of unknown function UPF0301 AM402_RS17320 7baf7fe9a088b936f86351f4806a6e9f 187 Gene3D G3DSA:3.40.1740.10 131 177 5.7E-34 T 06-07-2017 AM402_RS17320 7baf7fe9a088b936f86351f4806a6e9f 187 Gene3D G3DSA:3.40.1740.10 2 40 5.7E-34 T 06-07-2017 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 2.1E-184 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 890 0.0 T 06-07-2017 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 217 232 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 493 506 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 279 292 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 293 306 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 146 159 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 170 178 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 203 216 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 372 386 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 PRINTS PR00415 Aconitase family signature 431 442 1.8E-41 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 Gene3D G3DSA:3.30.499.10 369 575 4.5E-61 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 SUPERFAMILY SSF53732 10 626 6.93E-223 T 06-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 Gene3D G3DSA:3.20.19.10 636 889 1.3E-83 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 Gene3D G3DSA:3.40.1060.10 250 366 1.2E-36 T 06-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 Gene3D G3DSA:3.30.499.10 27 249 1.8E-77 T 06-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 06-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 SUPERFAMILY SSF52016 630 889 1.37E-92 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM402_RS12105 3fafe160776e65d1c3116b00d370013f 890 Pfam PF00694 Aconitase C-terminal domain 691 818 4.4E-49 T 06-07-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 357 368 - T 06-07-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 60 232 5.2E-51 T 06-07-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 180 195 - T 06-07-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 431 6.3E-199 T 06-07-2017 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 SMART SM00928 344 389 9.5E-23 T 06-07-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 SUPERFAMILY SSF142984 256 338 1.31E-20 T 06-07-2017 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 SUPERFAMILY SSF140490 341 433 9.02E-32 T 06-07-2017 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 SUPERFAMILY SSF142019 20 248 1.96E-86 T 06-07-2017 AM402_RS09135 1b67448e924706b26648b040fc4b31fb 454 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 347 429 1.6E-27 T 06-07-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS02710 5c218ab3b9a0ba471c39ad1dc0b62e75 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 2.6E-58 T 06-07-2017 IPR018636 Protein of unknown function DUF2058 AM402_RS00640 48e697ca63b6a34f68a5acb5cd69bea2 418 Hamap MF_02024 Lipid III flippase [wzxE]. 1 418 41.731 T 06-07-2017 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 AM402_RS00640 48e697ca63b6a34f68a5acb5cd69bea2 418 Pfam PF01943 Polysaccharide biosynthesis protein 4 285 6.2E-13 T 06-07-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 Pfam PF00773 RNB domain 192 520 1.5E-90 T 06-07-2017 AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 SUPERFAMILY SSF50249 565 646 1.5E-19 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 647 44.601 T 06-07-2017 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 SMART SM00316 563 647 0.0019 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 Pfam PF08206 Ribonuclease B OB domain 24 80 4.6E-19 T 06-07-2017 IPR013223 Ribonuclease B, N-terminal OB domain AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 ProSitePatterns PS01175 Ribonuclease II family signature. 488 512 - T 06-07-2017 IPR022966 Ribonuclease II/R, conserved site AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 SUPERFAMILY SSF50249 8 80 6.59E-16 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 646 0.0 T 06-07-2017 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 SMART SM00357 23 79 1.4E-12 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 SUPERFAMILY SSF50249 191 559 6.85E-113 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 647 3.6E-219 T 06-07-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 SMART SM00955 192 521 8.1E-124 T 06-07-2017 AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 SUPERFAMILY SSF50249 83 173 2.4E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS12150 f341f81321d66a5e4b4d95a627c1a129 647 Pfam PF00575 S1 RNA binding domain 566 643 1.1E-8 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS04660 c14df8b6f64fd5730493bbeb90383050 575 Pfam PF00005 ABC transporter 352 501 2.6E-29 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS04660 c14df8b6f64fd5730493bbeb90383050 575 SMART SM00382 361 547 2.2E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS04660 c14df8b6f64fd5730493bbeb90383050 575 Gene3D G3DSA:3.40.50.300 335 566 5.2E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04660 c14df8b6f64fd5730493bbeb90383050 575 SUPERFAMILY SSF90123 20 323 1.96E-51 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS04660 c14df8b6f64fd5730493bbeb90383050 575 SUPERFAMILY SSF52540 325 571 1.47E-87 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04660 c14df8b6f64fd5730493bbeb90383050 575 Gene3D G3DSA:1.20.1560.10 17 320 1.0E-42 T 06-07-2017 AM402_RS04660 c14df8b6f64fd5730493bbeb90383050 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS04660 c14df8b6f64fd5730493bbeb90383050 575 Pfam PF00664 ABC transporter transmembrane region 22 286 2.2E-28 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS06770 48329ab68ad557201b80833f73721452 402 Pfam PF01385 Probable transposase 163 275 2.8E-29 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS06770 48329ab68ad557201b80833f73721452 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 4.7E-11 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS06770 48329ab68ad557201b80833f73721452 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 6.0E-24 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS06770 48329ab68ad557201b80833f73721452 402 Pfam PF12323 Helix-turn-helix domain 1 48 5.5E-15 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS04010 72307fc8101d7c55b01c9405672fad8b 286 SMART SM00862 24 99 9.8E-8 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS04010 72307fc8101d7c55b01c9405672fad8b 286 SUPERFAMILY SSF46894 21 92 1.16E-9 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS04010 72307fc8101d7c55b01c9405672fad8b 286 Gene3D G3DSA:1.10.10.10 22 93 4.2E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS04010 72307fc8101d7c55b01c9405672fad8b 286 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 92 7.6E-7 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 SUPERFAMILY SSF55681 107 291 3.45E-105 T 06-07-2017 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 SUPERFAMILY SSF55681 425 585 3.45E-105 T 06-07-2017 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 SUPERFAMILY SSF50249 1 105 7.24E-35 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 559 4.9E-106 T 06-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 Gene3D G3DSA:3.30.1360.30 276 414 2.9E-46 T 06-07-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 3.1E-26 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 3.1E-26 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 3.1E-26 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.1E-26 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 Gene3D G3DSA:2.40.50.140 1 106 1.0E-41 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 SUPERFAMILY SSF55261 288 419 7.85E-44 T 06-07-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 Gene3D G3DSA:3.30.930.10 415 586 5.4E-113 T 06-07-2017 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 Gene3D G3DSA:3.30.930.10 131 275 5.4E-113 T 06-07-2017 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 Pfam PF01336 OB-fold nucleic acid binding domain 18 101 1.6E-17 T 06-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 Pfam PF02938 GAD domain 307 406 4.3E-28 T 06-07-2017 IPR029351 GAD domain Reactome: R-HSA-379726 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 585 1.7E-270 T 06-07-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM402_RS13055 434e924cc37e5f40160f6116fc46e59d 594 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 564 36.822 T 06-07-2017 AM402_RS04080 172ed043c81e93f889042de46b3182d7 108 Pfam PF00893 Small Multidrug Resistance protein 5 95 2.9E-23 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 AM402_RS04080 172ed043c81e93f889042de46b3182d7 108 SUPERFAMILY SSF103481 7 106 4.71E-18 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Gene3D G3DSA:3.30.70.20 201 230 5.6E-5 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Gene3D G3DSA:3.30.70.20 150 160 5.6E-5 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 7 657 6.7E-203 T 06-07-2017 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 SUPERFAMILY SSF54292 4 80 8.19E-19 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 SMART SM00929 91 131 8.8E-19 T 06-07-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 SUPERFAMILY SSF54862 84 214 1.05E-33 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 224 277 5.7E-11 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 91 128 1.6E-14 T 06-07-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 81 1.2E-11 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Gene3D G3DSA:3.10.20.30 5 87 8.4E-8 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Gene3D G3DSA:3.40.50.740 281 343 1.6E-34 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Gene3D G3DSA:3.40.50.740 507 689 1.6E-34 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 106 118 - T 06-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Gene3D G3DSA:2.20.25.90 231 277 4.5E-14 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 SUPERFAMILY SSF53706 222 692 9.87E-85 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Gene3D G3DSA:2.40.40.20 823 893 4.8E-4 T 06-07-2017 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 SMART SM00926 224 278 7.6E-11 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 SUPERFAMILY SSF50692 817 897 9.67E-7 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 Pfam PF00384 Molybdopterin oxidoreductase 300 644 2.7E-9 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 153 163 - T 06-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09140 605b361c946a9d2d129aac5ac446787b 910 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 06-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS01645 9eceb4d5534594529c8aef9ae1f89653 273 SUPERFAMILY SSF51161 6 260 1.04E-66 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS01645 9eceb4d5534594529c8aef9ae1f89653 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 7.6E-76 T 06-07-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM402_RS01645 9eceb4d5534594529c8aef9ae1f89653 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS01645 9eceb4d5534594529c8aef9ae1f89653 273 SMART SM00971 9 113 1.2E-60 T 06-07-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM402_RS01645 9eceb4d5534594529c8aef9ae1f89653 273 Gene3D G3DSA:1.10.3130.10 8 142 2.3E-51 T 06-07-2017 AM402_RS01645 9eceb4d5534594529c8aef9ae1f89653 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.0E-38 T 06-07-2017 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM402_RS01645 9eceb4d5534594529c8aef9ae1f89653 273 Gene3D G3DSA:2.160.10.10 143 251 2.2E-31 T 06-07-2017 AM402_RS01645 9eceb4d5534594529c8aef9ae1f89653 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 227 1.5E-9 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 SMART SM00342 21 104 3.9E-31 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 Pfam PF12833 Helix-turn-helix domain 28 105 5.4E-20 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 SUPERFAMILY SSF46689 5 55 1.34E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 Gene3D G3DSA:3.20.80.10 123 298 1.2E-52 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 Gene3D G3DSA:1.10.10.60 58 119 6.3E-24 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 7.3E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 7.3E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 SUPERFAMILY SSF46689 57 107 2.73E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 SUPERFAMILY SSF55136 125 297 5.23E-30 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 Pfam PF14526 Integron-associated effector binding protein 131 296 3.5E-13 T 06-07-2017 IPR029441 Integron-associated effector binding protein AM402_RS19420 62b9f396338dea6e8663ba8667b2d61b 301 Gene3D G3DSA:1.10.10.60 1 57 4.3E-21 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS18405 074302e1058f473eb9118c62bbbbd3c5 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.441 T 06-07-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM402_RS18405 074302e1058f473eb9118c62bbbbd3c5 545 SUPERFAMILY SSF52540 3 268 1.96E-122 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18405 074302e1058f473eb9118c62bbbbd3c5 545 Pfam PF06418 CTP synthase N-terminus 5 266 3.9E-126 T 06-07-2017 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM402_RS18405 074302e1058f473eb9118c62bbbbd3c5 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.5E-264 T 06-07-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM402_RS18405 074302e1058f473eb9118c62bbbbd3c5 545 SUPERFAMILY SSF52317 289 541 3.36E-90 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS18405 074302e1058f473eb9118c62bbbbd3c5 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.4E-63 T 06-07-2017 IPR017926 Glutamine amidotransferase AM402_RS18405 074302e1058f473eb9118c62bbbbd3c5 545 Gene3D G3DSA:3.40.50.880 288 541 2.5E-99 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS18405 074302e1058f473eb9118c62bbbbd3c5 545 Gene3D G3DSA:3.40.50.300 2 280 1.4E-133 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20250 05f5c3ba8d2676da0eabee542e1ce765 176 SUPERFAMILY SSF52218 1 169 8.39E-29 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS20250 05f5c3ba8d2676da0eabee542e1ce765 176 Gene3D G3DSA:3.40.50.360 3 74 7.0E-21 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS20250 05f5c3ba8d2676da0eabee542e1ce765 176 Gene3D G3DSA:3.40.50.360 106 173 7.0E-21 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS20250 05f5c3ba8d2676da0eabee542e1ce765 176 Pfam PF12724 Flavodoxin domain 4 153 9.7E-54 T 06-07-2017 IPR026816 Flavodoxin domain AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 Pfam PF01235 Sodium:alanine symporter family 53 445 1.4E-145 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 91 106 - T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 440 7.3E-153 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 PRINTS PR00175 Sodium/alanine symporter signature 350 372 1.8E-52 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 PRINTS PR00175 Sodium/alanine symporter signature 91 113 1.8E-52 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 PRINTS PR00175 Sodium/alanine symporter signature 212 231 1.8E-52 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 PRINTS PR00175 Sodium/alanine symporter signature 409 429 1.8E-52 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 PRINTS PR00175 Sodium/alanine symporter signature 307 325 1.8E-52 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS07240 9ab524fcd9db8034ec5992f0e4ce5fc6 466 PRINTS PR00175 Sodium/alanine symporter signature 184 202 1.8E-52 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS01520 a234fd78d4b71448dc10d2251a4f6c0a 85 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 21 81 0.009 T 06-07-2017 IPR020126 Protein of unknown function DUF2732 AM402_RS01520 a234fd78d4b71448dc10d2251a4f6c0a 85 Pfam PF10809 Protein of unknown function (DUF2732) 23 81 2.1E-14 T 06-07-2017 IPR020126 Protein of unknown function DUF2732 AM402_RS16145 2aa2369d5c9fecbc2ec95a5d473190cd 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.3E-12 T 06-07-2017 IPR012994 Membrane bound YbgT-like AM402_RS16145 2aa2369d5c9fecbc2ec95a5d473190cd 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 7.1E-16 T 06-07-2017 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AM402_RS07225 6f83fccda1708292090a5f96b3b01481 389 Gene3D G3DSA:1.10.287.70 140 229 5.8E-15 T 06-07-2017 AM402_RS07225 6f83fccda1708292090a5f96b3b01481 389 Pfam PF02254 TrkA-N domain 243 353 1.5E-14 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM402_RS07225 6f83fccda1708292090a5f96b3b01481 389 SUPERFAMILY SSF81324 166 263 4.19E-17 T 06-07-2017 AM402_RS07225 6f83fccda1708292090a5f96b3b01481 389 Gene3D G3DSA:3.40.50.720 233 353 1.6E-20 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07225 6f83fccda1708292090a5f96b3b01481 389 SUPERFAMILY SSF51735 238 372 1.67E-15 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07225 6f83fccda1708292090a5f96b3b01481 389 Pfam PF07885 Ion channel 146 224 7.9E-13 T 06-07-2017 IPR013099 Potassium channel domain AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.0E-17 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 SUPERFAMILY SSF53822 72 331 3.21E-40 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 Gene3D G3DSA:3.40.50.2300 62 183 9.4E-29 T 06-07-2017 AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 Gene3D G3DSA:1.10.260.40 11 61 2.2E-21 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 SMART SM00354 12 82 2.2E-29 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 SUPERFAMILY SSF47413 12 70 6.38E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 Gene3D G3DSA:3.40.50.2300 184 320 4.6E-33 T 06-07-2017 AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 Pfam PF13377 Periplasmic binding protein-like domain 180 323 7.3E-21 T 06-07-2017 AM402_RS09025 81faaa4ae5dbc46cf18ac44ffae9214f 348 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 06-07-2017 AM402_RS14830 c0e2fbc81c8ea6c1fc46a5dd9b7f007c 252 Gene3D G3DSA:1.10.260.40 5 80 5.0E-27 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14830 c0e2fbc81c8ea6c1fc46a5dd9b7f007c 252 Pfam PF01381 Helix-turn-helix 22 74 1.7E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS14830 c0e2fbc81c8ea6c1fc46a5dd9b7f007c 252 SMART SM00530 19 75 1.9E-6 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS14830 c0e2fbc81c8ea6c1fc46a5dd9b7f007c 252 Gene3D G3DSA:2.10.109.10 128 243 2.9E-18 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS14830 c0e2fbc81c8ea6c1fc46a5dd9b7f007c 252 SUPERFAMILY SSF47413 15 83 7.78E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14830 c0e2fbc81c8ea6c1fc46a5dd9b7f007c 252 Pfam PF00717 Peptidase S24-like 161 228 1.4E-14 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS14830 c0e2fbc81c8ea6c1fc46a5dd9b7f007c 252 SUPERFAMILY SSF51306 148 242 1.31E-18 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.0E-40 T 06-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Gene3D G3DSA:1.10.1030.10 400 538 2.2E-53 T 06-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 SUPERFAMILY SSF52440 557 676 1.35E-49 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Gene3D G3DSA:3.40.50.20 539 663 1.3E-62 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.136 T 06-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1049 0.0 T 06-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 SUPERFAMILY SSF52335 938 1071 2.09E-35 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.39 T 06-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 SUPERFAMILY SSF48108 396 553 3.66E-53 T 06-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 SUPERFAMILY SSF56059 128 401 1.4E-110 T 06-07-2017 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 SMART SM01096 424 547 4.0E-76 T 06-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.5E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.5E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.5E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.5E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.5E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.5E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.5E-64 T 06-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 SUPERFAMILY SSF56059 674 934 3.89E-105 T 06-07-2017 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 6.1E-39 T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.8E-77 T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Gene3D G3DSA:3.30.470.20 746 933 1.6E-79 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Gene3D G3DSA:3.30.470.20 200 399 4.8E-75 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 SUPERFAMILY SSF52440 2 127 1.12E-48 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Gene3D G3DSA:3.40.50.1380 939 1072 9.8E-40 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Gene3D G3DSA:3.30.1490.20 141 199 8.8E-28 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Gene3D G3DSA:3.40.50.20 3 108 6.8E-46 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Pfam PF02142 MGS-like domain 957 1041 9.1E-19 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 Gene3D G3DSA:3.30.1490.20 687 745 2.3E-26 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS19305 2865992c34f8c854b0d896e29f7f32d3 1075 SMART SM00851 956 1042 1.0E-31 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 Gene3D G3DSA:3.40.190.10 188 281 2.9E-11 T 06-07-2017 AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 Gene3D G3DSA:1.10.10.10 16 100 5.9E-33 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 SUPERFAMILY SSF46785 17 98 3.13E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 Pfam PF03466 LysR substrate binding domain 116 312 1.6E-19 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 Gene3D G3DSA:3.40.190.10 287 313 1.2E-22 T 06-07-2017 AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 Gene3D G3DSA:3.40.190.10 105 187 1.2E-22 T 06-07-2017 AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 2.2E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 2.2E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 3.9E-17 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07385 0d241917b5b14db21f8cecd3b98e9e04 314 SUPERFAMILY SSF53850 105 311 2.79E-39 T 06-07-2017 AM402_RS03725 86de051474853d4c6733127ef99e9fda 226 Gene3D G3DSA:1.20.1440.100 21 86 6.2E-15 T 06-07-2017 AM402_RS03725 86de051474853d4c6733127ef99e9fda 226 Gene3D G3DSA:3.40.50.1000 87 223 3.5E-38 T 06-07-2017 IPR023214 HAD-like domain AM402_RS03725 86de051474853d4c6733127ef99e9fda 226 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 207 4.3E-37 T 06-07-2017 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial AM402_RS03725 86de051474853d4c6733127ef99e9fda 226 SUPERFAMILY SSF56784 7 208 7.13E-27 T 06-07-2017 IPR023214 HAD-like domain AM402_RS03725 86de051474853d4c6733127ef99e9fda 226 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 192 1.4E-32 T 06-07-2017 AM402_RS03725 86de051474853d4c6733127ef99e9fda 226 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 10 195 1.1E-26 T 06-07-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AM402_RS14330 e0bbba83e2a2f5ac517d92f9509ab113 181 SUPERFAMILY SSF53474 2 142 4.66E-5 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS14330 e0bbba83e2a2f5ac517d92f9509ab113 181 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 176 3.1E-64 T 06-07-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM402_RS14330 e0bbba83e2a2f5ac517d92f9509ab113 181 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 177 47.796 T 06-07-2017 IPR022987 Uncharacterised protein family UPF0227 AM402_RS14330 e0bbba83e2a2f5ac517d92f9509ab113 181 Gene3D G3DSA:3.40.50.1820 2 143 3.3E-5 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS11155 1caabecb9ba479fec72490b1f6e07bd0 471 Pfam PF00155 Aminotransferase class I and II 145 439 4.0E-23 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS11155 1caabecb9ba479fec72490b1f6e07bd0 471 Gene3D G3DSA:3.90.1150.10 347 470 1.0E-7 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS11155 1caabecb9ba479fec72490b1f6e07bd0 471 SUPERFAMILY SSF46785 1 70 2.93E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11155 1caabecb9ba479fec72490b1f6e07bd0 471 Gene3D G3DSA:1.10.10.10 2 67 1.1E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11155 1caabecb9ba479fec72490b1f6e07bd0 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.3E-13 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS11155 1caabecb9ba479fec72490b1f6e07bd0 471 Gene3D G3DSA:3.40.640.10 145 346 1.3E-65 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS11155 1caabecb9ba479fec72490b1f6e07bd0 471 SUPERFAMILY SSF53383 95 469 7.21E-90 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS11155 1caabecb9ba479fec72490b1f6e07bd0 471 SMART SM00345 7 66 1.1E-14 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS20425 481fa647ca4895d5e1578de0131ffb55 283 Gene3D G3DSA:1.10.10.10 4 74 3.8E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20425 481fa647ca4895d5e1578de0131ffb55 283 SUPERFAMILY SSF53697 94 264 2.22E-30 T 06-07-2017 AM402_RS20425 481fa647ca4895d5e1578de0131ffb55 283 Gene3D G3DSA:3.40.50.10490 109 264 1.4E-28 T 06-07-2017 AM402_RS20425 481fa647ca4895d5e1578de0131ffb55 283 SUPERFAMILY SSF46689 7 76 1.04E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS20425 481fa647ca4895d5e1578de0131ffb55 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 77 7.1E-23 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM402_RS20425 481fa647ca4895d5e1578de0131ffb55 283 Pfam PF01380 SIS domain 129 257 4.2E-24 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.378 T 06-07-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 822 965 1.3E-13 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 586 1.9E-26 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 SUPERFAMILY SSF55326 619 816 2.88E-65 T 06-07-2017 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 SMART SM01211 1040 1295 4.0E-158 T 06-07-2017 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 SUPERFAMILY SSF56042 822 1034 1.02E-55 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 Gene3D G3DSA:3.30.1330.10 645 807 4.9E-15 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 Gene3D G3DSA:3.30.1330.10 210 420 1.3E-39 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 SUPERFAMILY SSF109736 154 219 6.02E-22 T 06-07-2017 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 Gene3D G3DSA:3.40.50.880 1040 1265 6.8E-14 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 SUPERFAMILY SSF82697 1 150 1.62E-49 T 06-07-2017 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 SUPERFAMILY SSF55326 220 427 2.83E-65 T 06-07-2017 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 SUPERFAMILY SSF52317 1037 1295 1.43E-97 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 06-07-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 2.0E-104 T 06-07-2017 AM402_RS08490 6cd61824db6d9007c6457492a8d7e758 1296 SUPERFAMILY SSF56042 431 614 5.53E-53 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS14110 17e69b9d42ed6ad07ab6866d09a4b25f 156 SUPERFAMILY SSF53955 7 155 1.89E-55 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS14110 17e69b9d42ed6ad07ab6866d09a4b25f 156 Gene3D G3DSA:1.10.530.40 17 155 6.2E-56 T 06-07-2017 IPR023347 Lysozyme domain GO:0003796 AM402_RS14110 17e69b9d42ed6ad07ab6866d09a4b25f 156 Pfam PF00959 Phage lysozyme 41 146 4.7E-23 T 06-07-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM402_RS11550 17e69b9d42ed6ad07ab6866d09a4b25f 156 SUPERFAMILY SSF53955 7 155 1.89E-55 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS11550 17e69b9d42ed6ad07ab6866d09a4b25f 156 Gene3D G3DSA:1.10.530.40 17 155 6.2E-56 T 06-07-2017 IPR023347 Lysozyme domain GO:0003796 AM402_RS11550 17e69b9d42ed6ad07ab6866d09a4b25f 156 Pfam PF00959 Phage lysozyme 41 146 4.7E-23 T 06-07-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 SUPERFAMILY SSF52540 177 521 5.49E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 Gene3D G3DSA:1.10.1780.10 16 153 6.8E-7 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 Gene3D G3DSA:3.40.50.300 179 359 4.4E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 2.9E-28 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 695 713 2.9E-28 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 724 742 2.9E-28 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 757 771 2.9E-28 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 SUPERFAMILY SSF52540 595 877 8.01E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 SUPERFAMILY SSF81923 16 123 1.08E-6 T 06-07-2017 IPR004176 Clp, N-terminal GO:0019538 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 332 3.9E-9 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 Gene3D G3DSA:1.10.8.60 822 902 4.1E-8 T 06-07-2017 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 680 698 - T 06-07-2017 IPR028299 ClpA/B, conserved site 2 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 Pfam PF07724 AAA domain (Cdc48 subfamily) 645 806 5.9E-37 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 14 896 0.0 T 06-07-2017 IPR017729 Type VI secretion system, ATPase ClpV1 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 Gene3D G3DSA:1.10.8.60 362 445 1.2E-29 T 06-07-2017 AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 SMART SM01086 812 904 6.2E-7 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 SMART SM00382 646 788 2.1E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 SMART SM00382 215 360 7.1E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 813 886 2.7E-9 T 06-07-2017 IPR019489 Clp ATPase, C-terminal AM402_RS15295 de2f9a598b1f244d0aab21e4281f20fc 907 Gene3D G3DSA:3.40.50.300 604 821 6.2E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10275 4ebd4080b12e1e8f3e46d125642ccc9d 462 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.048 T 06-07-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM402_RS10275 4ebd4080b12e1e8f3e46d125642ccc9d 462 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.7E-31 T 06-07-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AM402_RS10275 4ebd4080b12e1e8f3e46d125642ccc9d 462 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 354 1.8E-136 T 06-07-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM402_RS10275 4ebd4080b12e1e8f3e46d125642ccc9d 462 Pfam PF02601 Exonuclease VII, large subunit 126 440 7.0E-103 T 06-07-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AM402_RS02845 aef27525cc9d7934ef75a454c81e95e6 335 Pfam PF01032 FecCD transport family 51 333 3.8E-47 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM402_RS02845 aef27525cc9d7934ef75a454c81e95e6 335 SUPERFAMILY SSF81345 27 334 3.27E-48 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS02845 aef27525cc9d7934ef75a454c81e95e6 335 Gene3D G3DSA:1.10.3470.10 51 334 9.2E-48 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS02490 2d7b2a59b458ebf30d25ff8d02ab0a9a 371 PRINTS PR00811 Bacterial general secretion pathway protein D signature 210 234 1.0E-9 T 06-07-2017 IPR001775 GspD/PilQ family AM402_RS02490 2d7b2a59b458ebf30d25ff8d02ab0a9a 371 PRINTS PR00811 Bacterial general secretion pathway protein D signature 336 354 1.0E-9 T 06-07-2017 IPR001775 GspD/PilQ family AM402_RS02490 2d7b2a59b458ebf30d25ff8d02ab0a9a 371 PRINTS PR00811 Bacterial general secretion pathway protein D signature 359 371 1.0E-9 T 06-07-2017 IPR001775 GspD/PilQ family AM402_RS02490 2d7b2a59b458ebf30d25ff8d02ab0a9a 371 Pfam PF00263 Bacterial type II and III secretion system protein 214 371 7.8E-40 T 06-07-2017 IPR004846 Type II/III secretion system GO:0009306 AM402_RS02490 2d7b2a59b458ebf30d25ff8d02ab0a9a 371 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 317 350 - T 06-07-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AM402_RS09490 998ea8a9286ec3931d862ea94c868387 140 Gene3D G3DSA:3.10.129.10 12 131 5.0E-39 T 06-07-2017 IPR029069 HotDog domain AM402_RS09490 998ea8a9286ec3931d862ea94c868387 140 Pfam PF03061 Thioesterase superfamily 34 105 3.4E-15 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AM402_RS09490 998ea8a9286ec3931d862ea94c868387 140 SUPERFAMILY SSF54637 16 133 2.28E-33 T 06-07-2017 IPR029069 HotDog domain AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 Pfam PF04055 Radical SAM superfamily 27 220 4.8E-19 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 Gene3D G3DSA:3.30.70.20 46 91 1.2E-12 T 06-07-2017 AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 SUPERFAMILY SSF54862 10 115 1.12E-11 T 06-07-2017 AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 Pfam PF13353 4Fe-4S single cluster domain 17 140 3.3E-10 T 06-07-2017 AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 Gene3D G3DSA:3.80.30.10 113 273 2.1E-40 T 06-07-2017 AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 6 280 2.4E-121 T 06-07-2017 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 SUPERFAMILY SSF102114 78 250 1.45E-14 T 06-07-2017 AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 PIRSF PIRSF000371 1 286 5.5E-84 T 06-07-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM402_RS05120 b4e9b0dfaef4790757c2bc2379062141 288 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 06-07-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 SUPERFAMILY SSF46609 1 83 9.95E-38 T 06-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.8E-36 T 06-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.3E-23 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.3E-23 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.3E-23 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.3E-23 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.3E-23 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 Gene3D G3DSA:1.10.287.990 20 82 9.2E-26 T 06-07-2017 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 9.1E-42 T 06-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 SUPERFAMILY SSF54719 82 191 3.67E-43 T 06-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 PIRSF PIRSF000349 1 192 1.5E-86 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS11340 65b054084ff300f17302dae31da9babb 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 06-07-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS15805 6b3a6337618d01604e9354cf7941a9fe 154 Gene3D G3DSA:3.40.630.30 1 149 4.5E-30 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS15805 6b3a6337618d01604e9354cf7941a9fe 154 Pfam PF00583 Acetyltransferase (GNAT) family 58 142 5.3E-13 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS15805 6b3a6337618d01604e9354cf7941a9fe 154 SUPERFAMILY SSF55729 2 151 3.32E-29 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 48.64 T 06-07-2017 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 Gene3D G3DSA:3.40.50.300 3 215 8.0E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 SMART SM00487 23 225 1.1E-59 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 Pfam PF00270 DEAD/DEAH box helicase 28 196 1.1E-47 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 Pfam PF00271 Helicase conserved C-terminal domain 237 343 1.7E-29 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 SUPERFAMILY SSF52540 76 359 1.96E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 SMART SM00490 262 343 6.5E-29 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 Gene3D G3DSA:3.40.50.300 216 372 1.1E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08375 b2e66700f82f98348da01eb0350e3240 451 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 SMART SM00387 367 479 6.9E-22 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 SMART SM00388 256 324 3.3E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 Pfam PF00672 HAMP domain 182 250 2.5E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 Gene3D G3DSA:1.10.287.130 248 320 3.5E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 321 2.9E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 SUPERFAMILY SSF47384 239 320 1.73E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 Gene3D G3DSA:3.30.565.10 328 478 3.2E-30 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 477 3.9E-14 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 1.5E-7 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 1.5E-7 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 1.5E-7 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS08495 ae9a1338606f75ed642109c3e8d89b54 482 SUPERFAMILY SSF55874 328 477 9.43E-31 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS17625 dc92c709a8f82609212a2ffc7522596d 182 Pfam PF13505 Outer membrane protein beta-barrel domain 13 182 1.2E-21 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel AM402_RS17625 dc92c709a8f82609212a2ffc7522596d 182 Gene3D G3DSA:2.40.160.20 24 182 1.2E-37 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS17625 dc92c709a8f82609212a2ffc7522596d 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 43 55 2.3E-24 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS17625 dc92c709a8f82609212a2ffc7522596d 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 140 161 2.3E-24 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS17625 dc92c709a8f82609212a2ffc7522596d 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 89 112 2.3E-24 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS17625 dc92c709a8f82609212a2ffc7522596d 182 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 104 182 9.7E-6 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM402_RS17625 dc92c709a8f82609212a2ffc7522596d 182 SUPERFAMILY SSF56925 27 182 7.85E-26 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 SUPERFAMILY SSF54736 50 121 1.13E-25 T 06-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 SUPERFAMILY SSF48300 4 57 6.8E-16 T 06-07-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 Gene3D G3DSA:3.30.1390.10 51 121 6.3E-34 T 06-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 3.6E-48 T 06-07-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 Gene3D G3DSA:1.20.5.710 2 50 1.2E-22 T 06-07-2017 AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.161 T 06-07-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 2.1E-16 T 06-07-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 100 2.0E-15 T 06-07-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03675 a752e67700ad8406a21e1949928704c1 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 8.9E-31 T 06-07-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS08545 588046d8fae2a8511aa1ccbfa713ec60 224 SUPERFAMILY SSF46689 7 77 1.8E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08545 588046d8fae2a8511aa1ccbfa713ec60 224 SUPERFAMILY SSF48498 99 218 6.67E-18 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS08545 588046d8fae2a8511aa1ccbfa713ec60 224 Gene3D G3DSA:1.10.357.10 56 220 2.0E-43 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS08545 588046d8fae2a8511aa1ccbfa713ec60 224 Gene3D G3DSA:1.10.10.60 11 55 8.4E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08545 588046d8fae2a8511aa1ccbfa713ec60 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 2.9E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS08545 588046d8fae2a8511aa1ccbfa713ec60 224 Pfam PF09209 Domain of unknown function (DUF1956) 111 217 1.4E-18 T 06-07-2017 IPR015292 Transcription regulator YbiH, C-terminal AM402_RS18780 904087a6e78a5eb20ebc4695d30610ed 396 SUPERFAMILY SSF111369 51 300 1.83E-85 T 06-07-2017 AM402_RS18780 904087a6e78a5eb20ebc4695d30610ed 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 5.7E-81 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS18780 904087a6e78a5eb20ebc4695d30610ed 396 Gene3D G3DSA:2.40.50.100 173 208 1.6E-23 T 06-07-2017 AM402_RS18780 904087a6e78a5eb20ebc4695d30610ed 396 Gene3D G3DSA:2.40.50.100 65 98 1.6E-23 T 06-07-2017 AM402_RS18780 904087a6e78a5eb20ebc4695d30610ed 396 Pfam PF00529 HlyD membrane-fusion protein of T1SS 160 360 2.1E-9 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS18780 904087a6e78a5eb20ebc4695d30610ed 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 293 1.4E-13 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 Gene3D G3DSA:2.60.40.360 22 141 1.7E-25 T 06-07-2017 IPR008962 PapD-like AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 SUPERFAMILY SSF49354 17 141 3.14E-27 T 06-07-2017 IPR008962 PapD-like AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 Gene3D G3DSA:2.60.40.1070 156 221 1.2E-11 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 PRINTS PR00969 Pili chaperone signature 69 90 3.7E-16 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 PRINTS PR00969 Pili chaperone signature 157 172 3.7E-16 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 PRINTS PR00969 Pili chaperone signature 97 114 3.7E-16 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 PRINTS PR00969 Pili chaperone signature 123 138 3.7E-16 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 SUPERFAMILY SSF49584 149 219 1.96E-11 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 162 219 3.6E-8 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS12820 81f183993b538910e8ab90b3a6d199e9 233 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 141 4.3E-22 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS12565 41d38322a72eaf772ecb6eb41bab5dec 331 Pfam PF02733 Dak1 domain 18 326 1.5E-116 T 06-07-2017 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM402_RS12565 41d38322a72eaf772ecb6eb41bab5dec 331 Gene3D G3DSA:3.40.50.10440 12 184 3.5E-60 T 06-07-2017 AM402_RS12565 41d38322a72eaf772ecb6eb41bab5dec 331 SUPERFAMILY SSF82549 10 330 1.65E-113 T 06-07-2017 AM402_RS12565 41d38322a72eaf772ecb6eb41bab5dec 331 Gene3D G3DSA:3.30.1180.20 185 330 3.5E-54 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 456 1.5E-30 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 465 66.032 T 06-07-2017 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 Gene3D G3DSA:3.50.50.60 143 332 4.4E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 Gene3D G3DSA:3.30.390.30 343 459 1.5E-33 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 Gene3D G3DSA:3.50.50.60 5 142 4.5E-31 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 4.0E-58 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.7E-27 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.7E-27 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.7E-27 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 1.7E-27 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.7E-27 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 SUPERFAMILY SSF55424 344 462 1.68E-30 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PIRSF PIRSF000350 1 462 4.0E-71 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 SUPERFAMILY SSF51905 1 318 8.61E-58 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 5.0E-51 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 5.0E-51 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 5.0E-51 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 5.0E-51 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 5.0E-51 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 5.0E-51 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 5.0E-51 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.0E-51 T 06-07-2017 AM402_RS01125 c581753a3c63772b94b319cbbdeae069 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 5.0E-51 T 06-07-2017 AM402_RS18230 536178174a8b4002754fc3e9428156cd 667 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 20 503 6.0E-194 T 06-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM402_RS18230 536178174a8b4002754fc3e9428156cd 667 ProSitePatterns PS01303 BCCT family of transporters signature. 322 331 - T 06-07-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM402_RS18230 536178174a8b4002754fc3e9428156cd 667 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 58 505 7.1E-163 T 06-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 SUPERFAMILY SSF55920 4 255 5.1E-85 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 Gene3D G3DSA:3.90.230.10 4 256 9.5E-91 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 Pfam PF00557 Metallopeptidase family M24 13 243 3.9E-49 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 2.2E-89 T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 37.576 T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 1.6E-20 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 1.6E-20 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 1.6E-20 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS13580 b4be95fc2378c82b2030140379f6a89e 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 1.6E-20 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS13005 397f09b457c62dc288ffc9bd59cd788a 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 6.1E-88 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM402_RS13005 397f09b457c62dc288ffc9bd59cd788a 324 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 317 3.4E-132 T 06-07-2017 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AM402_RS13005 397f09b457c62dc288ffc9bd59cd788a 324 PIRSF PIRSF026649 13 317 2.4E-91 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM402_RS13005 397f09b457c62dc288ffc9bd59cd788a 324 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 52.927 T 06-07-2017 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 AM402_RS15530 1af0a9118b30c635c5f77249af4efd9a 230 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 201 4.1E-67 T 06-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AM402_RS15530 1af0a9118b30c635c5f77249af4efd9a 230 SUPERFAMILY SSF55729 3 227 3.81E-86 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS15530 1af0a9118b30c635c5f77249af4efd9a 230 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 222 8.6E-67 T 06-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AM402_RS15530 1af0a9118b30c635c5f77249af4efd9a 230 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 230 86.659 T 06-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AM402_RS06780 8dbd87f2449489c7e01a9c0c933d8373 159 PIRSF PIRSF006181 1 159 1.0E-56 T 06-07-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM402_RS06780 8dbd87f2449489c7e01a9c0c933d8373 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 144 1.2E-24 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS06780 8dbd87f2449489c7e01a9c0c933d8373 159 Gene3D G3DSA:3.90.960.10 1 157 2.3E-59 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS06780 8dbd87f2449489c7e01a9c0c933d8373 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 155 5.1E-56 T 06-07-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM402_RS06780 8dbd87f2449489c7e01a9c0c933d8373 159 SUPERFAMILY SSF55826 2 155 4.84E-43 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS21880 af991c1a135ac3091fcc4afc07903a02 262 Pfam PF13427 Domain of unknown function (DUF4111) 153 255 1.4E-33 T 06-07-2017 IPR025184 Domain of unknown function DUF4111 AM402_RS21880 af991c1a135ac3091fcc4afc07903a02 262 Gene3D G3DSA:3.30.460.10 11 106 7.5E-13 T 06-07-2017 AM402_RS21880 af991c1a135ac3091fcc4afc07903a02 262 SUPERFAMILY SSF81301 8 103 1.49E-11 T 06-07-2017 AM402_RS21880 af991c1a135ac3091fcc4afc07903a02 262 Pfam PF01909 Nucleotidyltransferase domain 30 59 3.1E-5 T 06-07-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM402_RS00020 6eccffaa979bd44f84372e4b537bb7b4 180 Gene3D G3DSA:2.60.40.1090 31 180 1.4E-31 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00020 6eccffaa979bd44f84372e4b537bb7b4 180 Pfam PF00419 Fimbrial protein 31 180 3.3E-13 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00020 6eccffaa979bd44f84372e4b537bb7b4 180 SUPERFAMILY SSF49401 39 180 2.78E-30 T 06-07-2017 IPR008966 Adhesion domain AM402_RS06745 b3acfa2f958d95abea0b2ae162718b59 322 SUPERFAMILY SSF53800 5 320 2.86E-99 T 06-07-2017 AM402_RS06745 b3acfa2f958d95abea0b2ae162718b59 322 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 06-07-2017 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM402_RS06745 b3acfa2f958d95abea0b2ae162718b59 322 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 35.95 T 06-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM402_RS06745 b3acfa2f958d95abea0b2ae162718b59 322 Pfam PF00762 Ferrochelatase 5 317 5.7E-106 T 06-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM402_RS06745 b3acfa2f958d95abea0b2ae162718b59 322 Gene3D G3DSA:3.40.50.1400 200 318 5.1E-30 T 06-07-2017 AM402_RS06745 b3acfa2f958d95abea0b2ae162718b59 322 TIGRFAM TIGR00109 hemH: ferrochelatase 3 317 2.3E-107 T 06-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM402_RS06745 b3acfa2f958d95abea0b2ae162718b59 322 Gene3D G3DSA:3.40.50.1400 4 199 7.5E-68 T 06-07-2017 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 Gene3D G3DSA:2.40.170.20 258 264 1.6E-27 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 Gene3D G3DSA:2.40.170.20 306 916 1.6E-27 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 Gene3D G3DSA:2.170.130.10 107 257 5.5E-8 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 254 1.2E-9 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 SUPERFAMILY SSF56935 306 622 6.41E-56 T 06-07-2017 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 SUPERFAMILY SSF56935 797 916 6.41E-56 T 06-07-2017 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 SUPERFAMILY SSF56935 109 275 6.41E-56 T 06-07-2017 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 SUPERFAMILY SSF56935 654 758 6.41E-56 T 06-07-2017 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 SMART SM00965 55 105 5.9E-8 T 06-07-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM402_RS19475 58bda71fe201d362108788f2da2f33af 916 Pfam PF07660 Secretin and TonB N terminus short domain 55 104 5.2E-7 T 06-07-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM402_RS04000 a04b2d589a138f7e2a1f6fec51cb730e 424 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 4.5E-148 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS04000 a04b2d589a138f7e2a1f6fec51cb730e 424 Gene3D G3DSA:3.40.640.10 2 285 5.2E-122 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS04000 a04b2d589a138f7e2a1f6fec51cb730e 424 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS04000 a04b2d589a138f7e2a1f6fec51cb730e 424 PIRSF PIRSF001434 1 423 7.8E-135 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS04000 a04b2d589a138f7e2a1f6fec51cb730e 424 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 420 2.4E-208 T 06-07-2017 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AM402_RS04000 a04b2d589a138f7e2a1f6fec51cb730e 424 Gene3D G3DSA:3.90.1150.10 286 422 1.6E-52 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS04000 a04b2d589a138f7e2a1f6fec51cb730e 424 SUPERFAMILY SSF53383 1 421 7.37E-135 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 133 7.0E-27 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 554 31.9 T 06-07-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 SUPERFAMILY SSF52518 6 179 7.5E-30 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 SUPERFAMILY SSF52518 367 554 1.55E-28 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 9 430 2.8E-137 T 06-07-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 Gene3D G3DSA:3.40.50.970 6 176 7.9E-42 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 PIRSF PIRSF004983 1 561 9.2E-175 T 06-07-2017 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 Gene3D G3DSA:3.40.50.970 363 549 1.6E-26 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS09200 386e675d645756dfc0eff5e79b12ca56 561 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 1.2E-85 T 06-07-2017 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 Pfam PF03170 Bacterial cellulose synthase subunit 54 665 1.3E-199 T 06-07-2017 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 PRINTS PR01440 Cellulose synthase subunit B signature 296 317 7.0E-32 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 PRINTS PR01440 Cellulose synthase subunit B signature 550 570 7.0E-32 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 PRINTS PR01440 Cellulose synthase subunit B signature 173 194 7.0E-32 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 PRINTS PR01440 Cellulose synthase subunit B signature 704 724 7.0E-32 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 PRINTS PR01440 Cellulose synthase subunit B signature 215 238 7.0E-32 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 PRINTS PR01440 Cellulose synthase subunit B signature 379 400 7.0E-32 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 PRINTS PR01440 Cellulose synthase subunit B signature 83 104 7.0E-32 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS07295 8036bf15804d451718571dd7e676c92a 763 PRINTS PR01440 Cellulose synthase subunit B signature 513 532 7.0E-32 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS05190 9349ade42d212066418a12c8c4f394d5 337 SUPERFAMILY SSF53335 152 316 5.38E-27 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS05190 9349ade42d212066418a12c8c4f394d5 337 Gene3D G3DSA:3.40.50.150 160 333 6.2E-23 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS05190 9349ade42d212066418a12c8c4f394d5 337 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS05190 9349ade42d212066418a12c8c4f394d5 337 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 43.282 T 06-07-2017 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS05190 9349ade42d212066418a12c8c4f394d5 337 Pfam PF05175 Methyltransferase small domain 167 333 6.2E-55 T 06-07-2017 IPR007848 Methyltransferase small domain GO:0008168 AM402_RS05190 9349ade42d212066418a12c8c4f394d5 337 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 5.1E-51 T 06-07-2017 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS07275 807b41335833267283d59f959e62bbbd 107 SUPERFAMILY SSF46785 16 103 2.16E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07275 807b41335833267283d59f959e62bbbd 107 Pfam PF01022 Bacterial regulatory protein, arsR family 31 75 1.9E-14 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07275 807b41335833267283d59f959e62bbbd 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 2.3E-10 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07275 807b41335833267283d59f959e62bbbd 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 2.3E-10 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07275 807b41335833267283d59f959e62bbbd 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 2.3E-10 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07275 807b41335833267283d59f959e62bbbd 107 Gene3D G3DSA:1.10.10.10 11 104 1.6E-35 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07275 807b41335833267283d59f959e62bbbd 107 SMART SM00418 22 100 7.6E-24 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 8.5E-12 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 2.1E-228 T 06-07-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 SUPERFAMILY SSF47781 521 609 4.77E-20 T 06-07-2017 IPR010994 RuvA domain 2-like AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 SUPERFAMILY SSF46600 190 243 7.59E-14 T 06-07-2017 IPR001943 UVR domain GO:0005515 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 SMART SM00465 17 98 2.5E-22 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.843 T 06-07-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 Gene3D G3DSA:4.10.860.10 183 243 2.9E-22 T 06-07-2017 IPR001943 UVR domain GO:0005515 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 SMART SM00278 556 575 0.22 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 SMART SM00278 588 607 9.8 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 Pfam PF02151 UvrB/uvrC motif 205 238 2.4E-9 T 06-07-2017 IPR001943 UVR domain GO:0005515 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 Gene3D G3DSA:3.40.1440.10 17 97 1.4E-12 T 06-07-2017 IPR027299 GIY-YIG domain AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 1.4E-46 T 06-07-2017 IPR001162 UvrC family homology region AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 Gene3D G3DSA:1.10.150.20 555 609 3.9E-22 T 06-07-2017 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 6.3E-8 T 06-07-2017 AM402_RS10670 becd060e60c7bd273ae78ed4e41138e9 610 SUPERFAMILY SSF82771 17 100 3.4E-23 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily AM402_RS08210 368fec0e90234d640d58e472282daa8a 131 Gene3D G3DSA:2.60.120.10 49 110 1.0E-6 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS08210 368fec0e90234d640d58e472282daa8a 131 SUPERFAMILY SSF51182 50 116 1.25E-7 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS02200 dcb2eb2ce26ebf5d06e39c69d4341688 178 SUPERFAMILY SSF56349 13 177 8.83E-23 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS02200 dcb2eb2ce26ebf5d06e39c69d4341688 178 Pfam PF00589 Phage integrase family 105 178 3.5E-16 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS02200 dcb2eb2ce26ebf5d06e39c69d4341688 178 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 89 2.2E-26 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS02200 dcb2eb2ce26ebf5d06e39c69d4341688 178 Gene3D G3DSA:1.10.443.10 101 177 3.2E-16 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS02200 dcb2eb2ce26ebf5d06e39c69d4341688 178 Gene3D G3DSA:1.10.150.130 10 85 6.5E-6 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS08425 b7bae91f1b8be2065af20575f2f2f1be 246 Gene3D G3DSA:2.40.50.140 6 73 4.1E-7 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS08425 b7bae91f1b8be2065af20575f2f2f1be 246 Pfam PF02565 Recombination protein O C terminal 83 226 6.1E-23 T 06-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM402_RS08425 b7bae91f1b8be2065af20575f2f2f1be 246 SUPERFAMILY SSF57863 86 161 4.45E-9 T 06-07-2017 AM402_RS08425 b7bae91f1b8be2065af20575f2f2f1be 246 Pfam PF11967 Recombination protein O N terminal 5 76 1.9E-22 T 06-07-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal AM402_RS08425 b7bae91f1b8be2065af20575f2f2f1be 246 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.2E-37 T 06-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM402_RS08425 b7bae91f1b8be2065af20575f2f2f1be 246 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.935 T 06-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM402_RS08425 b7bae91f1b8be2065af20575f2f2f1be 246 SUPERFAMILY SSF50249 5 75 3.26E-13 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 357 435 1.1E-29 T 06-07-2017 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 Gene3D G3DSA:3.30.70.20 435 464 6.8E-76 T 06-07-2017 AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 Gene3D G3DSA:3.30.70.20 235 357 6.8E-76 T 06-07-2017 AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 Gene3D G3DSA:3.30.70.20 5 56 2.2E-11 T 06-07-2017 AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 Pfam PF13247 4Fe-4S dicluster domain 174 270 7.7E-37 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 Gene3D G3DSA:3.30.70.20 195 234 5.3E-25 T 06-07-2017 AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 Gene3D G3DSA:3.30.70.20 151 194 5.2E-12 T 06-07-2017 AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 SUPERFAMILY SSF54862 1 501 7.74E-182 T 06-07-2017 AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 Gene3D G3DSA:1.10.3650.10 358 433 2.8E-31 T 06-07-2017 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AM402_RS20160 db0fcee9b9b02fd3a006db0b77ab316c 517 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 491 4.8E-296 T 06-07-2017 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM402_RS09860 5741caa577475edf8f3455cf5fe23212 370 PRINTS PR00207 Flagellin signature 37 54 5.7E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM402_RS09860 5741caa577475edf8f3455cf5fe23212 370 PRINTS PR00207 Flagellin signature 111 134 5.7E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM402_RS09860 5741caa577475edf8f3455cf5fe23212 370 PRINTS PR00207 Flagellin signature 76 95 5.7E-32 T 06-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM402_RS09860 5741caa577475edf8f3455cf5fe23212 370 SUPERFAMILY SSF64518 1 370 5.89E-104 T 06-07-2017 AM402_RS09860 5741caa577475edf8f3455cf5fe23212 370 Pfam PF00700 Bacterial flagellin C-terminal helical region 285 369 2.2E-31 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09860 5741caa577475edf8f3455cf5fe23212 370 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.2E-46 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09860 5741caa577475edf8f3455cf5fe23212 370 Gene3D G3DSA:1.20.1330.10 55 171 2.0E-62 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09860 5741caa577475edf8f3455cf5fe23212 370 Gene3D G3DSA:1.20.1330.10 272 326 2.0E-62 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS10880 7abfca0e948004b09e6bebf94c9a5739 134 Pfam PF00816 H-NS histone family 32 126 1.4E-20 T 06-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM402_RS10880 7abfca0e948004b09e6bebf94c9a5739 134 SUPERFAMILY SSF81273 92 134 3.26E-12 T 06-07-2017 AM402_RS10880 7abfca0e948004b09e6bebf94c9a5739 134 Gene3D G3DSA:4.10.430.10 91 134 2.5E-25 T 06-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM402_RS10880 7abfca0e948004b09e6bebf94c9a5739 134 SMART SM00528 86 134 2.7E-25 T 06-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AM402_RS10880 7abfca0e948004b09e6bebf94c9a5739 134 Gene3D G3DSA:1.10.287.1050 1 58 1.4E-30 T 06-07-2017 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 AM402_RS10880 7abfca0e948004b09e6bebf94c9a5739 134 PIRSF PIRSF002096 1 134 1.8E-56 T 06-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM402_RS10880 7abfca0e948004b09e6bebf94c9a5739 134 SUPERFAMILY SSF81273 2 58 1.75E-18 T 06-07-2017 AM402_RS15995 1e7472dda2092d4bfd9b9fc31ce9a7ca 256 Gene3D G3DSA:3.40.190.10 27 108 1.2E-15 T 06-07-2017 AM402_RS15995 1e7472dda2092d4bfd9b9fc31ce9a7ca 256 Gene3D G3DSA:3.40.190.10 216 255 1.2E-15 T 06-07-2017 AM402_RS15995 1e7472dda2092d4bfd9b9fc31ce9a7ca 256 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 252 8.9E-76 T 06-07-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AM402_RS15995 1e7472dda2092d4bfd9b9fc31ce9a7ca 256 Gene3D G3DSA:3.40.190.10 109 215 1.3E-42 T 06-07-2017 AM402_RS15995 1e7472dda2092d4bfd9b9fc31ce9a7ca 256 PIRSF PIRSF004846 2 256 3.1E-76 T 06-07-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AM402_RS15995 1e7472dda2092d4bfd9b9fc31ce9a7ca 256 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 1.4E-47 T 06-07-2017 AM402_RS15995 1e7472dda2092d4bfd9b9fc31ce9a7ca 256 SUPERFAMILY SSF53850 26 255 2.23E-68 T 06-07-2017 AM402_RS12140 38a22d754bb77c7e1e0cbdc786e5692d 248 Gene3D G3DSA:3.20.20.70 16 241 3.1E-93 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS12140 38a22d754bb77c7e1e0cbdc786e5692d 248 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 16 236 8.2E-54 T 06-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS12140 38a22d754bb77c7e1e0cbdc786e5692d 248 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.72 T 06-07-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS12140 38a22d754bb77c7e1e0cbdc786e5692d 248 SMART SM00934 16 237 1.3E-102 T 06-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS12140 38a22d754bb77c7e1e0cbdc786e5692d 248 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 5.8E-61 T 06-07-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS12140 38a22d754bb77c7e1e0cbdc786e5692d 248 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 06-07-2017 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS12140 38a22d754bb77c7e1e0cbdc786e5692d 248 SUPERFAMILY SSF51366 15 240 2.33E-81 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM402_RS03445 1bc6c3c1052dc762e764a9b19881bdb6 473 Gene3D G3DSA:3.50.50.60 191 272 1.8E-55 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS03445 1bc6c3c1052dc762e764a9b19881bdb6 473 Gene3D G3DSA:3.50.50.60 415 472 1.8E-55 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS03445 1bc6c3c1052dc762e764a9b19881bdb6 473 Gene3D G3DSA:3.50.50.60 48 131 1.8E-55 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS03445 1bc6c3c1052dc762e764a9b19881bdb6 473 Pfam PF01266 FAD dependent oxidoreductase 56 453 2.2E-51 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM402_RS03445 1bc6c3c1052dc762e764a9b19881bdb6 473 SUPERFAMILY SSF51905 415 471 1.1E-48 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS03445 1bc6c3c1052dc762e764a9b19881bdb6 473 SUPERFAMILY SSF51905 55 273 1.1E-48 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS19935 1c798420c5952bea9a42a2156ff2bc72 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 276 8.3E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS19935 1c798420c5952bea9a42a2156ff2bc72 282 Gene3D G3DSA:1.10.3720.10 4 271 4.9E-49 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS19935 1c798420c5952bea9a42a2156ff2bc72 282 SUPERFAMILY SSF161098 4 278 8.63E-55 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS19785 aa532b72c729e4c75c5281e603586931 136 Pfam PF14760 Rnk N-terminus 4 44 4.1E-15 T 06-07-2017 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AM402_RS19785 aa532b72c729e4c75c5281e603586931 136 SUPERFAMILY SSF54534 49 127 2.22E-17 T 06-07-2017 AM402_RS19785 aa532b72c729e4c75c5281e603586931 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 3.8E-18 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM402_RS19785 aa532b72c729e4c75c5281e603586931 136 Gene3D G3DSA:1.10.286.20 1 44 8.4E-20 T 06-07-2017 AM402_RS19785 aa532b72c729e4c75c5281e603586931 136 Gene3D G3DSA:3.10.50.30 46 136 6.2E-27 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM402_RS19785 aa532b72c729e4c75c5281e603586931 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 44.235 T 06-07-2017 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 AM402_RS01590 88ee8c1a8c54cc21e8ffbfc4241d8b03 331 Gene3D G3DSA:3.90.25.10 209 314 2.5E-14 T 06-07-2017 AM402_RS01590 88ee8c1a8c54cc21e8ffbfc4241d8b03 331 Gene3D G3DSA:3.40.50.720 2 208 8.0E-23 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01590 88ee8c1a8c54cc21e8ffbfc4241d8b03 331 SUPERFAMILY SSF51735 1 315 2.9E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01590 88ee8c1a8c54cc21e8ffbfc4241d8b03 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 251 1.0E-26 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AM402_RS02400 d9ca244ee985a7d30e31d18b2e8bd5eb 138 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 72 120 1.4E-6 T 06-07-2017 IPR003741 LUD domain AM402_RS02400 d9ca244ee985a7d30e31d18b2e8bd5eb 138 Gene3D G3DSA:3.40.50.10420 65 109 1.5E-6 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 Gene3D G3DSA:1.20.5.440 93 135 5.1E-24 T 06-07-2017 AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 SUPERFAMILY SSF46604 90 137 9.42E-15 T 06-07-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 1.0E-31 T 06-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 1.1E-28 T 06-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.147 T 06-07-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 Gene3D G3DSA:2.60.15.10 5 92 2.5E-30 T 06-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 4.4E-12 T 06-07-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 SUPERFAMILY SSF51344 5 87 4.05E-25 T 06-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02280 7d1c6f351d1a9aa6e8dce9a82b61f1fd 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 134 3.2E-44 T 06-07-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-52 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 Gene3D G3DSA:1.10.1900.20 55 117 3.4E-31 T 06-07-2017 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 SUPERFAMILY SSF74731 3 117 4.97E-50 T 06-07-2017 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.861 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 Pfam PF00453 Ribosomal protein L20 3 109 7.2E-49 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 5.0E-14 T 06-07-2017 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.6E-42 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.6E-42 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS13380 e9f84a4c0f9baff2e8b8b71876df0438 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.6E-42 T 06-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS20095 1671156653c4527daa6e8ed71ec8950e 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 115 5.0E-58 T 06-07-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 AM402_RS20095 1671156653c4527daa6e8ed71ec8950e 131 SUPERFAMILY SSF81343 2 130 4.71E-57 T 06-07-2017 AM402_RS20095 1671156653c4527daa6e8ed71ec8950e 131 PIRSF PIRSF000180 2 130 3.7E-62 T 06-07-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 AM402_RS20095 1671156653c4527daa6e8ed71ec8950e 131 Gene3D G3DSA:1.20.1300.10 3 130 1.5E-54 T 06-07-2017 AM402_RS20095 1671156653c4527daa6e8ed71ec8950e 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 30.032 T 06-07-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 AM402_RS20095 1671156653c4527daa6e8ed71ec8950e 131 Pfam PF02300 Fumarate reductase subunit C 3 128 1.5E-54 T 06-07-2017 IPR003510 Fumarate reductase, subunit C GO:0016020 AM402_RS14095 07b8d5ff35283c8d0e6965b1ca4cbcf1 116 Pfam PF01844 HNH endonuclease 66 111 8.0E-17 T 06-07-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM402_RS14095 07b8d5ff35283c8d0e6965b1ca4cbcf1 116 SMART SM00507 53 107 1.1E-12 T 06-07-2017 IPR003615 HNH nuclease AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 Gene3D G3DSA:1.10.3210.10 2 121 2.5E-67 T 06-07-2017 IPR006674 HD domain AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 Gene3D G3DSA:1.10.3210.10 177 262 2.5E-67 T 06-07-2017 IPR006674 HD domain AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 Pfam PF01966 HD domain 65 135 2.0E-9 T 06-07-2017 IPR006674 HD domain AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 Gene3D G3DSA:1.10.3550.10 122 174 1.4E-32 T 06-07-2017 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 Gene3D G3DSA:1.10.3550.10 388 500 1.4E-32 T 06-07-2017 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 29 499 4.1E-121 T 06-07-2017 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 SMART SM00471 61 276 1.2E-11 T 06-07-2017 IPR003607 HD/PDEase domain AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 Gene3D G3DSA:1.10.3410.10 263 387 1.2E-29 T 06-07-2017 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 502 51.107 T 06-07-2017 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 Pfam PF13286 Phosphohydrolase-associated domain 468 497 9.5E-6 T 06-07-2017 IPR026875 Phosphohydrolase-associated domain AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 SUPERFAMILY SSF109604 176 209 2.17E-62 T 06-07-2017 AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 SUPERFAMILY SSF109604 245 429 2.17E-62 T 06-07-2017 AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 SUPERFAMILY SSF109604 30 133 2.17E-62 T 06-07-2017 AM402_RS18430 1fd211de2e17d6741f76acc712df584d 502 SUPERFAMILY SSF109604 481 500 2.17E-62 T 06-07-2017 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 SUPERFAMILY SSF55957 357 443 2.62E-22 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 SUPERFAMILY SSF53738 258 365 3.3E-31 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.1E-13 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.1E-13 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.1E-13 T 06-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 1.6E-14 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 06-07-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 1.3E-199 T 06-07-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 SUPERFAMILY SSF53738 3 181 2.63E-49 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Gene3D G3DSA:3.40.120.10 4 151 1.1E-46 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Gene3D G3DSA:3.40.120.10 251 367 1.9E-32 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 48.395 T 06-07-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Gene3D G3DSA:3.40.120.10 176 250 8.4E-28 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 1.5E-32 T 06-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 2.0E-45 T 06-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 SUPERFAMILY SSF53738 156 254 7.85E-32 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Gene3D G3DSA:3.30.310.50 369 443 4.2E-19 T 06-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS00160 ec3af434f39b48a7a9162f7992463ab3 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.5E-21 T 06-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS11115 25939aee0ca6e44a012639a5e125723a 325 SUPERFAMILY SSF57884 277 323 4.58E-8 T 06-07-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM402_RS11115 25939aee0ca6e44a012639a5e125723a 325 SUPERFAMILY SSF54060 26 237 5.65E-81 T 06-07-2017 AM402_RS11115 25939aee0ca6e44a012639a5e125723a 325 Pfam PF04231 Endonuclease I 30 236 1.7E-52 T 06-07-2017 IPR007346 Endonuclease I GO:0004518 AM402_RS11115 25939aee0ca6e44a012639a5e125723a 325 Gene3D G3DSA:3.40.10.10 279 323 4.4E-8 T 06-07-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM402_RS03215 75fc3ca580936494a8ea561435c8bb6b 457 Pfam PF06969 HemN C-terminal domain 363 431 1.7E-10 T 06-07-2017 IPR010723 HemN, C-terminal AM402_RS03215 75fc3ca580936494a8ea561435c8bb6b 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 1.5E-218 T 06-07-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 AM402_RS03215 75fc3ca580936494a8ea561435c8bb6b 457 Pfam PF04055 Radical SAM superfamily 57 226 4.2E-18 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS03215 75fc3ca580936494a8ea561435c8bb6b 457 SUPERFAMILY SSF102114 5 444 4.05E-142 T 06-07-2017 AM402_RS03215 75fc3ca580936494a8ea561435c8bb6b 457 SMART SM00729 52 272 1.1E-56 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM402_RS03215 75fc3ca580936494a8ea561435c8bb6b 457 Gene3D G3DSA:3.80.30.20 53 283 9.6E-33 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AM402_RS03215 75fc3ca580936494a8ea561435c8bb6b 457 PIRSF PIRSF000167 3 454 5.9E-174 T 06-07-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.1E-27 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 3.1E-27 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 3.1E-27 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.1E-27 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 3.1E-27 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 Gene3D G3DSA:3.90.800.10 69 181 2.9E-38 T 06-07-2017 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 SUPERFAMILY SSF52374 4 299 3.75E-111 T 06-07-2017 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 Gene3D G3DSA:1.10.10.350 364 462 4.5E-31 T 06-07-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 Gene3D G3DSA:1.10.1160.10 234 315 6.0E-36 T 06-07-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 Gene3D G3DSA:3.40.50.620 3 68 1.3E-52 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 Gene3D G3DSA:3.40.50.620 182 231 1.3E-52 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 2.5E-202 T 06-07-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 306 3.7E-117 T 06-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 SUPERFAMILY SSF48163 300 462 1.57E-45 T 06-07-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM402_RS08785 8c5921d43acc2c91bb37e9bdb3bfe0ef 472 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 4 462 33.887 T 06-07-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM402_RS05865 9af4f542197218789d00c36ab2ccc784 218 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 195 2.4E-78 T 06-07-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM402_RS05865 9af4f542197218789d00c36ab2ccc784 218 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.4E-52 T 06-07-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM402_RS05865 9af4f542197218789d00c36ab2ccc784 218 SMART SM01207 10 185 1.3E-86 T 06-07-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM402_RS05865 9af4f542197218789d00c36ab2ccc784 218 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.95 T 06-07-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM402_RS14475 af002f457b36d688642f97109d8d1452 977 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 400 418 1.2E-5 T 06-07-2017 IPR013425 Autotransporter-associated beta strand repeat AM402_RS14475 af002f457b36d688642f97109d8d1452 977 Gene3D G3DSA:2.40.128.130 673 977 6.8E-58 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS14475 af002f457b36d688642f97109d8d1452 977 Gene3D G3DSA:2.160.20.20 364 620 1.8E-8 T 06-07-2017 IPR012332 P22 tailspike C-terminal domain-like AM402_RS14475 af002f457b36d688642f97109d8d1452 977 PRINTS PR00483 Bacterial acid phosphatase class A signature 174 200 3.7E-6 T 06-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AM402_RS14475 af002f457b36d688642f97109d8d1452 977 PRINTS PR00483 Bacterial acid phosphatase class A signature 206 230 3.7E-6 T 06-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AM402_RS14475 af002f457b36d688642f97109d8d1452 977 Gene3D G3DSA:1.20.144.10 51 262 9.4E-38 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS14475 af002f457b36d688642f97109d8d1452 977 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 501 977 2.8E-48 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM402_RS14475 af002f457b36d688642f97109d8d1452 977 Pfam PF01569 PAP2 superfamily 147 232 4.8E-11 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS14475 af002f457b36d688642f97109d8d1452 977 SUPERFAMILY SSF103515 663 977 5.36E-54 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS14475 af002f457b36d688642f97109d8d1452 977 SMART SM00869 704 967 5.2E-42 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS14475 af002f457b36d688642f97109d8d1452 977 SUPERFAMILY SSF51126 388 588 6.28E-8 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS14475 af002f457b36d688642f97109d8d1452 977 SUPERFAMILY SSF48317 147 233 2.09E-19 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS14475 af002f457b36d688642f97109d8d1452 977 Pfam PF03797 Autotransporter beta-domain 705 965 2.4E-45 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 SUPERFAMILY SSF69349 485 679 1.26E-38 T 06-07-2017 AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 SUPERFAMILY SSF69279 63 232 2.83E-41 T 06-07-2017 AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 Gene3D G3DSA:2.40.50.230 415 494 7.6E-34 T 06-07-2017 IPR006531 Gp5 N-terminal AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 Gene3D G3DSA:3.55.50.10 151 229 3.6E-22 T 06-07-2017 AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 74 546 9.7E-106 T 06-07-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 SUPERFAMILY SSF69279 237 408 7.99E-31 T 06-07-2017 AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 Pfam PF05954 Phage late control gene D protein (GPD) 82 375 4.2E-76 T 06-07-2017 AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 SUPERFAMILY SSF69255 407 494 7.59E-29 T 06-07-2017 AM402_RS02695 55ac92a620d2d4a83870ba33d99058e0 723 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 62 563 1.4E-164 T 06-07-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM402_RS18295 9ece7936455cf735641ff47ad8d90aaa 385 Gene3D G3DSA:3.40.50.720 5 193 8.3E-14 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18295 9ece7936455cf735641ff47ad8d90aaa 385 SUPERFAMILY SSF51735 8 148 1.88E-12 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18295 9ece7936455cf735641ff47ad8d90aaa 385 Gene3D G3DSA:1.10.1040.10 207 368 1.1E-32 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS18295 9ece7936455cf735641ff47ad8d90aaa 385 SUPERFAMILY SSF48179 198 370 5.44E-35 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS18295 9ece7936455cf735641ff47ad8d90aaa 385 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 9 118 1.8E-7 T 06-07-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS18295 9ece7936455cf735641ff47ad8d90aaa 385 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 197 366 1.6E-34 T 06-07-2017 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 AM402_RS14360 6b10567bc946afd9c026f2156d018b26 261 SUPERFAMILY SSF51556 1 257 5.06E-89 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS14360 6b10567bc946afd9c026f2156d018b26 261 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM402_RS14360 6b10567bc946afd9c026f2156d018b26 261 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 255 5.8E-96 T 06-07-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AM402_RS14360 6b10567bc946afd9c026f2156d018b26 261 Gene3D G3DSA:3.20.20.140 2 256 1.2E-88 T 06-07-2017 AM402_RS14360 6b10567bc946afd9c026f2156d018b26 261 Pfam PF01026 TatD related DNase 4 255 7.3E-80 T 06-07-2017 IPR001130 TatD family GO:0016788 AM402_RS14360 6b10567bc946afd9c026f2156d018b26 261 PIRSF PIRSF005902 1 259 1.7E-80 T 06-07-2017 IPR001130 TatD family GO:0016788 AM402_RS14360 6b10567bc946afd9c026f2156d018b26 261 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM402_RS14360 6b10567bc946afd9c026f2156d018b26 261 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.833 T 06-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 SUPERFAMILY SSF55973 112 232 1.37E-51 T 06-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 SUPERFAMILY SSF55973 233 382 5.89E-71 T 06-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 PIRSF PIRSF000497 1 382 1.5E-175 T 06-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 06-07-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.6E-45 T 06-07-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 3.0E-69 T 06-07-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 06-07-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 Gene3D G3DSA:3.30.300.10 244 381 3.5E-71 T 06-07-2017 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 SUPERFAMILY SSF55973 3 109 2.83E-48 T 06-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 6.5E-44 T 06-07-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.0E-200 T 06-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 Gene3D G3DSA:3.30.300.10 136 233 1.1E-43 T 06-07-2017 AM402_RS07320 871bbca49e23dc810dc01f1143d04a06 384 Gene3D G3DSA:3.30.300.10 11 135 1.8E-51 T 06-07-2017 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 Pfam PF00750 tRNA synthetases class I (R) 102 446 3.7E-166 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 SUPERFAMILY SSF47323 454 576 1.63E-35 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 SMART SM00836 460 576 4.2E-39 T 06-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.5E-26 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.5E-26 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 3.5E-26 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.5E-26 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 1.2E-201 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 SUPERFAMILY SSF55190 2 96 3.4E-22 T 06-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 SUPERFAMILY SSF52374 109 454 1.58E-96 T 06-07-2017 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 Gene3D G3DSA:3.30.1360.70 2 104 3.6E-32 T 06-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 SMART SM01016 5 87 2.3E-27 T 06-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 Gene3D G3DSA:1.10.730.10 454 576 3.5E-37 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.441 T 06-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 Gene3D G3DSA:3.40.50.620 110 453 8.2E-118 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.9E-21 T 06-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM402_RS13095 ff6dba44e45a48bff426bdfe4eb9ba06 576 Pfam PF05746 DALR anticodon binding domain 460 576 5.1E-35 T 06-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM402_RS16855 6de38a5800e6634188d2886843f31fc7 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 5.2E-31 T 06-07-2017 IPR007454 Uncharacterised protein family UPF0250 AM402_RS16855 6de38a5800e6634188d2886843f31fc7 87 Gene3D G3DSA:3.30.70.1460 1 87 2.7E-38 T 06-07-2017 IPR027471 YbeD-like domain AM402_RS16855 6de38a5800e6634188d2886843f31fc7 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 27.294 T 06-07-2017 IPR007454 Uncharacterised protein family UPF0250 AM402_RS16855 6de38a5800e6634188d2886843f31fc7 87 SUPERFAMILY SSF117991 1 87 3.92E-32 T 06-07-2017 IPR027471 YbeD-like domain AM402_RS03625 4fd7e08427261bf38b5b8ff7b588f379 97 Gene3D G3DSA:3.40.1260.10 1 93 1.4E-30 T 06-07-2017 IPR027396 DsrEFH-like AM402_RS03625 4fd7e08427261bf38b5b8ff7b588f379 97 SUPERFAMILY SSF75169 1 95 4.12E-27 T 06-07-2017 IPR027396 DsrEFH-like AM402_RS03625 4fd7e08427261bf38b5b8ff7b588f379 97 Pfam PF04077 DsrH like protein 8 92 4.5E-27 T 06-07-2017 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM402_RS03625 4fd7e08427261bf38b5b8ff7b588f379 97 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 1.5E-25 T 06-07-2017 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM402_RS09550 cc3f8a94e7700b2e163d59e754cacbec 350 PIRSF PIRSF001237 5 350 1.1E-139 T 06-07-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 AM402_RS09550 cc3f8a94e7700b2e163d59e754cacbec 350 Gene3D G3DSA:3.20.20.140 8 347 1.6E-130 T 06-07-2017 AM402_RS09550 cc3f8a94e7700b2e163d59e754cacbec 350 SUPERFAMILY SSF51556 8 347 8.93E-145 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS09550 cc3f8a94e7700b2e163d59e754cacbec 350 ProSitePatterns PS00483 Dihydroorotase signature 2. 250 261 - T 06-07-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 AM402_RS09550 cc3f8a94e7700b2e163d59e754cacbec 350 Hamap MF_00219 Dihydroorotase [pyrC]. 7 348 51.924 T 06-07-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 AM402_RS09550 cc3f8a94e7700b2e163d59e754cacbec 350 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 9 347 2.1E-144 T 06-07-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 AM402_RS09550 cc3f8a94e7700b2e163d59e754cacbec 350 Pfam PF01979 Amidohydrolase family 16 315 2.8E-22 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AM402_RS01715 cae7d66f6712e3f487f814b7a816171a 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 194 331 1.7E-24 T 06-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM402_RS01715 cae7d66f6712e3f487f814b7a816171a 358 Gene3D G3DSA:3.40.50.2000 38 180 7.1E-17 T 06-07-2017 AM402_RS01715 cae7d66f6712e3f487f814b7a816171a 358 SUPERFAMILY SSF53756 37 356 7.43E-60 T 06-07-2017 AM402_RS01715 cae7d66f6712e3f487f814b7a816171a 358 Gene3D G3DSA:3.40.50.2000 194 356 1.4E-36 T 06-07-2017 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 1.4E-9 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 1.4E-9 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 1.4E-9 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 1.4E-9 T 06-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 2.0E-63 T 06-07-2017 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 2.6E-128 T 06-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Gene3D G3DSA:3.90.800.10 101 209 1.6E-48 T 06-07-2017 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Gene3D G3DSA:2.40.240.10 348 461 5.9E-50 T 06-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 SUPERFAMILY SSF52374 10 337 6.82E-105 T 06-07-2017 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 0.0 T 06-07-2017 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 SUPERFAMILY SSF50715 340 546 3.87E-80 T 06-07-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 548 54.07 T 06-07-2017 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Gene3D G3DSA:1.10.1160.10 263 338 5.1E-40 T 06-07-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Gene3D G3DSA:3.40.50.620 28 96 2.3E-43 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Gene3D G3DSA:3.40.50.620 212 262 2.3E-43 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS16305 ba9c791aa28eeef0d3da5ce280cbc515 555 Gene3D G3DSA:2.40.240.10 462 546 1.3E-33 T 06-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 372 392 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 13 506 4.4E-228 T 06-07-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 SUPERFAMILY SSF53067 265 506 9.5E-86 T 06-07-2017 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 SUPERFAMILY SSF53067 13 263 8.05E-95 T 06-07-2017 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 271 460 3.8E-61 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 14 262 5.5E-89 T 06-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 Hamap MF_00186 Glycerol kinase [glpK]. 12 507 59.436 T 06-07-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 145 157 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 PIRSF PIRSF000538 12 509 7.2E-179 T 06-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 Gene3D G3DSA:3.30.420.40 265 507 6.9E-105 T 06-07-2017 AM402_RS01275 49b8e8ff28168c997140b569a61f9357 510 Gene3D G3DSA:3.30.420.40 11 263 1.9E-105 T 06-07-2017 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.9E-254 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 Gene3D G3DSA:1.10.560.10 369 518 1.0E-39 T 06-07-2017 IPR027413 GroEL-like equatorial domain AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 PRINTS PR00298 60kDa chaperonin signature 27 53 3.3E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 PRINTS PR00298 60kDa chaperonin signature 350 375 3.3E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 PRINTS PR00298 60kDa chaperonin signature 398 419 3.3E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 PRINTS PR00298 60kDa chaperonin signature 83 110 3.3E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 PRINTS PR00298 60kDa chaperonin signature 268 291 3.3E-74 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.605 T 06-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 06-07-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 SUPERFAMILY SSF48592 406 521 3.28E-77 T 06-07-2017 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 SUPERFAMILY SSF48592 7 134 3.28E-77 T 06-07-2017 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 SUPERFAMILY SSF52029 184 376 1.05E-83 T 06-07-2017 IPR027409 GroEL-like apical domain AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 SUPERFAMILY SSF54849 137 203 3.89E-24 T 06-07-2017 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 5.0E-96 T 06-07-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 Gene3D G3DSA:1.10.560.10 3 187 1.0E-45 T 06-07-2017 IPR027413 GroEL-like equatorial domain AM402_RS04955 dc1ec10c1abaeca48b60dd7d070af0ea 548 Gene3D G3DSA:3.50.7.10 188 368 4.7E-99 T 06-07-2017 IPR027409 GroEL-like apical domain AM402_RS12685 f2d140ceba02b5014875afc6911c2537 160 Pfam PF13673 Acetyltransferase (GNAT) domain 74 141 1.9E-7 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS12685 f2d140ceba02b5014875afc6911c2537 160 SUPERFAMILY SSF55729 1 157 3.67E-21 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS12685 f2d140ceba02b5014875afc6911c2537 160 Gene3D G3DSA:3.40.630.30 2 159 1.3E-23 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 SUPERFAMILY SSF50249 2 64 1.14E-15 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 SMART SM00278 109 128 0.051 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 SMART SM00278 74 93 0.054 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 Gene3D G3DSA:2.40.50.140 2 65 2.8E-24 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 Gene3D G3DSA:1.10.8.10 162 204 5.8E-18 T 06-07-2017 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 SUPERFAMILY SSF46929 162 205 2.09E-9 T 06-07-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 SUPERFAMILY SSF47781 67 137 1.33E-22 T 06-07-2017 IPR010994 RuvA domain 2-like AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 Pfam PF14520 Helix-hairpin-helix domain 73 131 5.9E-17 T 06-07-2017 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 207 31.516 T 06-07-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 Gene3D G3DSA:1.10.150.20 68 139 1.3E-31 T 06-07-2017 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 206 1.6E-64 T 06-07-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 Pfam PF07499 RuvA, C-terminal domain 163 205 1.8E-13 T 06-07-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM402_RS13035 85e63736613ae2805f66157f3fc25548 207 Pfam PF01330 RuvA N terminal domain 2 63 3.6E-17 T 06-07-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 Gene3D G3DSA:3.40.50.300 3 230 2.2E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 Gene3D G3DSA:3.40.50.300 322 550 3.8E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 SMART SM00382 34 268 6.3E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 SMART SM00382 356 537 7.7E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 Pfam PF00005 ABC transporter 28 167 2.1E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 Pfam PF00005 ABC transporter 348 491 2.4E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 SUPERFAMILY SSF52540 316 551 1.33E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15895 a4dd560c0e2b2dbe5ff4390d35ba6a5d 589 SUPERFAMILY SSF52540 8 228 8.74E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11875 682c6b52b01e097abeec5c19351411f7 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 06-07-2017 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 AM402_RS11875 682c6b52b01e097abeec5c19351411f7 167 Gene3D G3DSA:3.40.30.10 4 167 6.2E-46 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS11875 682c6b52b01e097abeec5c19351411f7 167 SUPERFAMILY SSF52833 4 164 3.07E-44 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS11875 682c6b52b01e097abeec5c19351411f7 167 Pfam PF08534 Redoxin 21 163 5.1E-29 T 06-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM402_RS11875 682c6b52b01e097abeec5c19351411f7 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.654 T 06-07-2017 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 AM402_RS04095 402cb8b32625217089164cd74674a0e4 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 351 5.9E-77 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS04095 402cb8b32625217089164cd74674a0e4 368 Gene3D G3DSA:2.40.50.100 162 195 2.9E-16 T 06-07-2017 AM402_RS04095 402cb8b32625217089164cd74674a0e4 368 Gene3D G3DSA:2.40.50.100 68 101 2.9E-16 T 06-07-2017 AM402_RS04095 402cb8b32625217089164cd74674a0e4 368 SUPERFAMILY SSF111369 60 271 4.45E-36 T 06-07-2017 AM402_RS04095 402cb8b32625217089164cd74674a0e4 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 267 5.4E-30 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS03875 6707c4e98561615d6d7c1752edfb3ea0 827 Pfam PF01553 Acyltransferase 284 426 4.3E-25 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM402_RS03875 6707c4e98561615d6d7c1752edfb3ea0 827 PIRSF PIRSF500064 2 819 0.0 T 06-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM402_RS03875 6707c4e98561615d6d7c1752edfb3ea0 827 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 12 802 0.0 T 06-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM402_RS03875 6707c4e98561615d6d7c1752edfb3ea0 827 Gene3D G3DSA:3.40.1130.10 286 440 2.7E-4 T 06-07-2017 AM402_RS03875 6707c4e98561615d6d7c1752edfb3ea0 827 SMART SM00563 302 429 9.9E-28 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM402_RS03875 6707c4e98561615d6d7c1752edfb3ea0 827 SUPERFAMILY SSF69593 238 484 5.36E-25 T 06-07-2017 AM402_RS03875 6707c4e98561615d6d7c1752edfb3ea0 827 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 810 31.884 T 06-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM402_RS03875 6707c4e98561615d6d7c1752edfb3ea0 827 PIRSF PIRSF000437 19 817 5.2E-302 T 06-07-2017 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AM402_RS05380 cca0572ddc2cac993f3bd2112443e6fa 218 Gene3D G3DSA:1.10.260.40 16 66 1.6E-5 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS05380 cca0572ddc2cac993f3bd2112443e6fa 218 SUPERFAMILY SSF47413 14 68 2.81E-5 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 308 6.4E-27 T 06-07-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 36 2.0E-5 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 3.2E-67 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 3.2E-67 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 3.2E-67 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 3.2E-67 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 3.2E-67 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 3.2E-67 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 3.2E-67 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 3.2E-67 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 Gene3D G3DSA:4.10.480.10 224 300 4.0E-31 T 06-07-2017 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 Gene3D G3DSA:3.40.50.700 47 222 2.4E-59 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 SUPERFAMILY SSF56770 44 307 1.57E-83 T 06-07-2017 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 5.7E-33 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 8 364 1.4E-172 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS19255 6520d6f68295335aaa8fe3ede4747de6 374 PIRSF PIRSF000310 4 365 8.0E-132 T 06-07-2017 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 AM402_RS11285 79c4cba1d4facb6f64f8eadc7570e25b 463 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 37 378 7.8E-87 T 06-07-2017 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM402_RS11285 79c4cba1d4facb6f64f8eadc7570e25b 463 SUPERFAMILY SSF53383 11 446 7.5E-134 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS11285 79c4cba1d4facb6f64f8eadc7570e25b 463 Gene3D G3DSA:3.40.640.10 71 316 3.6E-27 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS11285 79c4cba1d4facb6f64f8eadc7570e25b 463 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 14 443 1.1E-195 T 06-07-2017 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 9.6E-57 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 9.6E-57 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 9.6E-57 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 9.6E-57 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 9.6E-57 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 9.6E-57 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 Gene3D G3DSA:1.10.1390.10 502 548 2.1E-22 T 06-07-2017 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 06-07-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.838 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 SUPERFAMILY SSF53697 5 547 1.08E-224 T 06-07-2017 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 Pfam PF00342 Phosphoglucose isomerase 52 541 1.2E-256 T 06-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 06-07-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 Gene3D G3DSA:3.40.50.10490 147 184 4.3E-177 T 06-07-2017 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 Gene3D G3DSA:3.40.50.10490 263 501 4.3E-177 T 06-07-2017 AM402_RS03860 33085bf12c30f85155cdd13dce443aa3 548 Gene3D G3DSA:3.40.50.10490 5 102 4.3E-177 T 06-07-2017 AM402_RS14370 24744ee431494f0c7ae487c85df7afe2 214 Gene3D G3DSA:3.40.50.300 4 208 1.3E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14370 24744ee431494f0c7ae487c85df7afe2 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 7.0E-66 T 06-07-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM402_RS14370 24744ee431494f0c7ae487c85df7afe2 214 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 06-07-2017 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM402_RS14370 24744ee431494f0c7ae487c85df7afe2 214 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 28.555 T 06-07-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM402_RS14370 24744ee431494f0c7ae487c85df7afe2 214 SUPERFAMILY SSF52540 1 208 1.11E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14370 24744ee431494f0c7ae487c85df7afe2 214 Pfam PF02223 Thymidylate kinase 9 199 1.8E-60 T 06-07-2017 AM402_RS11095 2dbd8df0932f5fa81890eb9aa999d29a 275 Pfam PF14491 Protein of unknown function (DUF4435) 21 250 3.9E-44 T 06-07-2017 IPR029492 Domain of unknown function DUF4435 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 SMART SM00864 12 204 2.0E-112 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.2E-42 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 06-07-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 PRINTS PR00423 Cell division protein FtsZ signature 125 146 6.7E-52 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 PRINTS PR00423 Cell division protein FtsZ signature 188 210 6.7E-52 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 PRINTS PR00423 Cell division protein FtsZ signature 211 232 6.7E-52 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 PRINTS PR00423 Cell division protein FtsZ signature 97 117 6.7E-52 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 SUPERFAMILY SSF55307 203 319 1.1E-42 T 06-07-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 SUPERFAMILY SSF52490 12 207 5.89E-70 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 Gene3D G3DSA:3.30.1330.20 214 321 4.1E-47 T 06-07-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 Pfam PF12327 FtsZ family, C-terminal domain 221 315 1.4E-37 T 06-07-2017 IPR024757 Cell division protein FtsZ, C-terminal AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 340 8.3E-143 T 06-07-2017 IPR000158 Cell division protein FtsZ GO:0005525 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 SMART SM00865 206 324 6.0E-56 T 06-07-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 357 38.391 T 06-07-2017 IPR000158 Cell division protein FtsZ GO:0005525 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 Gene3D G3DSA:3.40.50.1440 13 213 5.8E-94 T 06-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM402_RS07470 e2f6330a78bf3a2bedd0634413935683 388 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 06-07-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.8E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.8E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.8E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.8E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.8E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.8E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.8E-52 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 SUPERFAMILY SSF50677 226 415 2.72E-56 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Gene3D G3DSA:3.90.740.10 223 424 2.5E-60 T 06-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 4.4E-77 T 06-07-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 1.0E-6 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 3.7E-28 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 575 650 4.6E-7 T 06-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 SUPERFAMILY SSF47323 663 859 6.92E-36 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Pfam PF08264 Anticodon-binding domain of tRNA 700 825 4.4E-18 T 06-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.35 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Gene3D G3DSA:1.10.730.10 648 795 4.2E-45 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Gene3D G3DSA:3.40.50.620 618 647 3.8E-152 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Gene3D G3DSA:3.40.50.620 425 573 3.8E-152 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 Gene3D G3DSA:3.40.50.620 4 222 3.8E-152 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 06-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 SUPERFAMILY SSF52374 416 668 8.16E-143 T 06-07-2017 AM402_RS16800 bcd8a58a5dfa83a70d1cbea8e6bdd004 860 SUPERFAMILY SSF52374 5 226 8.16E-143 T 06-07-2017 AM402_RS17420 a4d800970040de7483c39996f94f23e1 333 SUPERFAMILY SSF160940 3 306 7.72E-96 T 06-07-2017 AM402_RS17420 a4d800970040de7483c39996f94f23e1 333 Pfam PF06924 Protein of unknown function (DUF1281) 15 145 1.9E-44 T 06-07-2017 IPR009694 Protein of unknown function DUF1281 AM402_RS17420 a4d800970040de7483c39996f94f23e1 333 Gene3D G3DSA:3.30.70.1270 221 300 2.1E-34 T 06-07-2017 AM402_RS17420 a4d800970040de7483c39996f94f23e1 333 Gene3D G3DSA:1.10.3530.10 32 220 6.2E-63 T 06-07-2017 IPR023136 Api92-like domain AM402_RS03000 64c91b0130002d526d475aba33e8cf47 279 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 273 1.2E-111 T 06-07-2017 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AM402_RS03000 64c91b0130002d526d475aba33e8cf47 279 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 83 4.4E-27 T 06-07-2017 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AM402_RS03000 64c91b0130002d526d475aba33e8cf47 279 Pfam PF01694 Rhomboid family 134 269 3.1E-27 T 06-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM402_RS03000 64c91b0130002d526d475aba33e8cf47 279 Gene3D G3DSA:1.20.1540.10 97 269 8.5E-37 T 06-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM402_RS03000 64c91b0130002d526d475aba33e8cf47 279 SUPERFAMILY SSF144091 96 272 1.7E-41 T 06-07-2017 AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 Gene3D G3DSA:3.40.50.970 363 536 1.0E-44 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 Gene3D G3DSA:3.40.50.1220 186 330 5.6E-35 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 PIRSF PIRSF036565 1 544 1.2E-162 T 06-07-2017 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 176 1.6E-28 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 SUPERFAMILY SSF52518 363 534 1.09E-37 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 SUPERFAMILY SSF52518 1 180 1.62E-35 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 SUPERFAMILY SSF52467 164 322 5.18E-24 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 293 1.6E-19 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 Gene3D G3DSA:3.40.50.970 2 180 3.7E-68 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18390 515124f148ca15e9de39ce2ce0237781 545 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 520 5.0E-20 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM402_RS05585 8d996a2118967e10cc465ab206a48971 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM402_RS05585 8d996a2118967e10cc465ab206a48971 260 Pfam PF01026 TatD related DNase 5 255 3.9E-67 T 06-07-2017 IPR001130 TatD family GO:0016788 AM402_RS05585 8d996a2118967e10cc465ab206a48971 260 SUPERFAMILY SSF51556 3 256 5.75E-78 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS05585 8d996a2118967e10cc465ab206a48971 260 PIRSF PIRSF005902 1 259 3.0E-71 T 06-07-2017 IPR001130 TatD family GO:0016788 AM402_RS05585 8d996a2118967e10cc465ab206a48971 260 Gene3D G3DSA:3.20.20.140 2 256 4.8E-80 T 06-07-2017 AM402_RS05585 8d996a2118967e10cc465ab206a48971 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM402_RS05585 8d996a2118967e10cc465ab206a48971 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 06-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM402_RS06525 4242358a072c067124133fef3888abe5 145 SUPERFAMILY SSF55729 1 138 3.19E-25 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS06525 4242358a072c067124133fef3888abe5 145 Pfam PF13673 Acetyltransferase (GNAT) domain 35 137 1.0E-15 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS06525 4242358a072c067124133fef3888abe5 145 Gene3D G3DSA:3.40.630.30 1 139 2.3E-25 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 1.2E-23 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 1.2E-209 T 06-07-2017 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 SMART SM00859 3 122 9.2E-29 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 SUPERFAMILY SSF55347 134 355 6.55E-79 T 06-07-2017 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 06-07-2017 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.085 T 06-07-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 8.0E-59 T 06-07-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 PIRSF PIRSF000148 1 368 3.8E-72 T 06-07-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 SUPERFAMILY SSF51735 1 147 4.69E-53 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 Gene3D G3DSA:3.30.360.10 143 351 5.7E-78 T 06-07-2017 AM402_RS01875 030b6fc9d2c23ba978138066cc057e4a 368 Gene3D G3DSA:3.40.50.720 1 142 3.1E-64 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19285 ad0179fddbbf9863da7523e34aded734 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS19285 ad0179fddbbf9863da7523e34aded734 385 SUPERFAMILY SSF56796 1 382 1.7E-105 T 06-07-2017 AM402_RS19285 ad0179fddbbf9863da7523e34aded734 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 367 4.1E-89 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM402_RS19285 ad0179fddbbf9863da7523e34aded734 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS19285 ad0179fddbbf9863da7523e34aded734 385 Gene3D G3DSA:1.20.1090.10 183 385 2.2E-51 T 06-07-2017 AM402_RS19285 ad0179fddbbf9863da7523e34aded734 385 Gene3D G3DSA:3.40.50.1970 1 182 3.3E-53 T 06-07-2017 AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 5.2E-23 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.2E-23 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 5.2E-23 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.2E-23 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 SUPERFAMILY SSF46785 2 92 3.53E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 8.7E-16 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 Gene3D G3DSA:1.10.10.10 4 79 2.6E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 06-07-2017 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AM402_RS07040 7da3f400d4fd4a0c39b103777914f286 111 SMART SM00418 5 83 9.8E-26 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS10590 f2be5db488d11eddc17d3ed7a2549ab1 207 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS10590 f2be5db488d11eddc17d3ed7a2549ab1 207 SMART SM00382 21 200 5.3E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS10590 f2be5db488d11eddc17d3ed7a2549ab1 207 SUPERFAMILY SSF52540 7 204 3.63E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10590 f2be5db488d11eddc17d3ed7a2549ab1 207 Gene3D G3DSA:3.40.50.300 11 205 4.5E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10590 f2be5db488d11eddc17d3ed7a2549ab1 207 Pfam PF00005 ABC transporter 12 151 3.1E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS01300 878ab5dc09f70b6e4247bde736dc7d71 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 2.7E-93 T 06-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS01300 878ab5dc09f70b6e4247bde736dc7d71 256 Pfam PF00121 Triosephosphate isomerase 5 246 2.5E-91 T 06-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS01300 878ab5dc09f70b6e4247bde736dc7d71 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 06-07-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS01300 878ab5dc09f70b6e4247bde736dc7d71 256 Gene3D G3DSA:3.20.20.70 1 251 7.9E-101 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS01300 878ab5dc09f70b6e4247bde736dc7d71 256 SUPERFAMILY SSF51351 1 251 1.57E-90 T 06-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS01300 878ab5dc09f70b6e4247bde736dc7d71 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 39.876 T 06-07-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03965 d7900e7479bc0cc7d2293459c32b8569 105 SMART SM00530 15 70 2.8E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS03965 d7900e7479bc0cc7d2293459c32b8569 105 SUPERFAMILY SSF47413 8 74 1.36E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS03965 d7900e7479bc0cc7d2293459c32b8569 105 Pfam PF01381 Helix-turn-helix 16 70 3.2E-14 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS03965 d7900e7479bc0cc7d2293459c32b8569 105 Gene3D G3DSA:1.10.260.40 6 73 1.1E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 2.7E-51 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 6.4E-63 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 6.2E-29 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 6.2E-29 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 6.2E-29 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 6.2E-29 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 6.2E-29 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 SUPERFAMILY SSF47928 3 104 5.62E-27 T 06-07-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.861 T 06-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 06-07-2017 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 AM402_RS02300 219929545cb1e3f269438fdadab1033e 177 Gene3D G3DSA:1.10.520.20 3 102 6.2E-33 T 06-07-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 AM402_RS13315 e51d4bdb3f616591401c714493f1ae85 163 Gene3D G3DSA:3.90.1720.10 47 163 6.7E-41 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS13315 e51d4bdb3f616591401c714493f1ae85 163 Pfam PF00877 NlpC/P60 family 56 162 1.2E-30 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS13315 e51d4bdb3f616591401c714493f1ae85 163 SUPERFAMILY SSF54001 46 163 8.83E-41 T 06-07-2017 AM402_RS12955 50ef52b50467c2a4ded06cec65ff247d 197 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 184 1.1E-52 T 06-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM402_RS12955 50ef52b50467c2a4ded06cec65ff247d 197 PIRSF PIRSF004982 7 193 3.5E-45 T 06-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM402_RS12955 50ef52b50467c2a4ded06cec65ff247d 197 Pfam PF03843 Outer membrane lipoprotein Slp family 22 179 3.9E-47 T 06-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AM402_RS04005 c461fff76844b1185e0c477e42a985d3 197 Gene3D G3DSA:1.10.357.10 16 189 3.9E-27 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS04005 c461fff76844b1185e0c477e42a985d3 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 7.3E-12 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS04005 c461fff76844b1185e0c477e42a985d3 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 5.3E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS04005 c461fff76844b1185e0c477e42a985d3 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 5.3E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS04005 c461fff76844b1185e0c477e42a985d3 197 SUPERFAMILY SSF46689 7 77 1.64E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS04005 c461fff76844b1185e0c477e42a985d3 197 SUPERFAMILY SSF48498 95 185 1.85E-23 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS06365 3c0314d95bad190fe8852b6062e8f2ba 271 Gene3D G3DSA:3.40.190.10 30 162 1.3E-56 T 06-07-2017 AM402_RS06365 3c0314d95bad190fe8852b6062e8f2ba 271 Pfam PF03180 NLPA lipoprotein 33 271 9.7E-95 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS06365 3c0314d95bad190fe8852b6062e8f2ba 271 PIRSF PIRSF002854 1 271 4.6E-102 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS06365 3c0314d95bad190fe8852b6062e8f2ba 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 1.6E-136 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS06365 3c0314d95bad190fe8852b6062e8f2ba 271 SUPERFAMILY SSF53850 33 271 3.86E-79 T 06-07-2017 AM402_RS07810 65443f994267740f165ff4a1917df3ba 792 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 137 518 1.7E-114 T 06-07-2017 IPR008766 Replication gene A protein GO:0006260 AM402_RS03610 5f5c289e72f9361886691004a47e5d12 234 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 5.0E-59 T 06-07-2017 IPR013559 YheO-like AM402_RS03610 5f5c289e72f9361886691004a47e5d12 234 Pfam PF08348 YheO-like PAS domain 29 137 5.3E-36 T 06-07-2017 IPR013559 YheO-like AM402_RS03610 5f5c289e72f9361886691004a47e5d12 234 Pfam PF13309 HTH domain 171 228 3.2E-18 T 06-07-2017 AM402_RS06415 e7561ec7b7109bade42390a5b91b0070 397 SUPERFAMILY SSF51905 121 263 1.21E-19 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS06415 e7561ec7b7109bade42390a5b91b0070 397 SUPERFAMILY SSF51905 3 145 2.59E-24 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS06415 e7561ec7b7109bade42390a5b91b0070 397 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 142 5.5E-12 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS06415 e7561ec7b7109bade42390a5b91b0070 397 Gene3D G3DSA:3.50.50.60 264 333 2.1E-40 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS06415 e7561ec7b7109bade42390a5b91b0070 397 Gene3D G3DSA:3.50.50.60 4 123 2.1E-40 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS15345 4bbdda2c99f9d5e0e87c7f471423fde5 571 SUPERFAMILY SSF141523 441 490 1.31E-21 T 06-07-2017 AM402_RS15345 4bbdda2c99f9d5e0e87c7f471423fde5 571 SUPERFAMILY SSF141523 328 384 1.31E-21 T 06-07-2017 AM402_RS15345 4bbdda2c99f9d5e0e87c7f471423fde5 571 Pfam PF01471 Putative peptidoglycan binding domain 242 304 7.1E-10 T 06-07-2017 IPR002477 Peptidoglycan binding-like AM402_RS15345 4bbdda2c99f9d5e0e87c7f471423fde5 571 Gene3D G3DSA:2.40.440.10 328 375 1.5E-14 T 06-07-2017 AM402_RS15345 4bbdda2c99f9d5e0e87c7f471423fde5 571 Gene3D G3DSA:2.40.440.10 443 491 1.5E-14 T 06-07-2017 AM402_RS15345 4bbdda2c99f9d5e0e87c7f471423fde5 571 SUPERFAMILY SSF47090 227 312 4.32E-14 T 06-07-2017 IPR002477 Peptidoglycan binding-like AM402_RS15345 4bbdda2c99f9d5e0e87c7f471423fde5 571 Pfam PF03734 L,D-transpeptidase catalytic domain 333 498 4.1E-30 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM402_RS15345 4bbdda2c99f9d5e0e87c7f471423fde5 571 Gene3D G3DSA:1.10.101.10 227 312 2.4E-16 T 06-07-2017 IPR002477 Peptidoglycan binding-like AM402_RS08330 49aecc06fac4d2adda15b13d6f4c536a 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 4.7E-28 T 06-07-2017 IPR005031 Coenzyme Q-binding protein COQ10, START domain AM402_RS08330 49aecc06fac4d2adda15b13d6f4c536a 144 SUPERFAMILY SSF55961 1 142 7.62E-34 T 06-07-2017 AM402_RS08330 49aecc06fac4d2adda15b13d6f4c536a 144 Gene3D G3DSA:3.30.530.20 1 142 1.0E-45 T 06-07-2017 IPR023393 START-like domain AM402_RS01820 827bb5393ec97c3ea8ec5a32841d01bc 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 34.67 T 06-07-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS01820 827bb5393ec97c3ea8ec5a32841d01bc 214 Pfam PF00156 Phosphoribosyl transferase domain 64 158 1.7E-11 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM402_RS01820 827bb5393ec97c3ea8ec5a32841d01bc 214 Gene3D G3DSA:3.40.50.2020 7 212 1.1E-78 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS01820 827bb5393ec97c3ea8ec5a32841d01bc 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 5.4E-65 T 06-07-2017 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS01820 827bb5393ec97c3ea8ec5a32841d01bc 214 SUPERFAMILY SSF53271 2 211 9.67E-46 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS17935 0e448312786ca0f63a09da37dbc80e8a 417 Gene3D G3DSA:1.20.1600.10 24 407 1.3E-40 T 06-07-2017 AM402_RS17935 0e448312786ca0f63a09da37dbc80e8a 417 SUPERFAMILY SSF56954 7 407 2.09E-52 T 06-07-2017 AM402_RS17935 0e448312786ca0f63a09da37dbc80e8a 417 Pfam PF02321 Outer membrane efflux protein 235 394 4.6E-14 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM402_RS17935 0e448312786ca0f63a09da37dbc80e8a 417 Pfam PF02321 Outer membrane efflux protein 31 212 1.4E-17 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM402_RS17610 966a292883a42daf068c4e111dc58643 79 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 79 1.3E-29 T 06-07-2017 IPR021676 Protein of unknown function DUF3262 AM402_RS17610 966a292883a42daf068c4e111dc58643 79 Pfam PF11660 Protein of unknown function (DUF3262) 1 78 1.5E-30 T 06-07-2017 IPR021676 Protein of unknown function DUF3262 AM402_RS11315 392d8346777ba664e3e4b7b399f1eb1a 218 SUPERFAMILY SSF63380 1 93 7.48E-28 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS11315 392d8346777ba664e3e4b7b399f1eb1a 218 Gene3D G3DSA:2.40.30.20 105 201 3.3E-25 T 06-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AM402_RS11315 392d8346777ba664e3e4b7b399f1eb1a 218 Gene3D G3DSA:2.40.30.20 5 104 5.0E-33 T 06-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AM402_RS11315 392d8346777ba664e3e4b7b399f1eb1a 218 Pfam PF00677 Lumazine binding domain 3 87 1.5E-20 T 06-07-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS11315 392d8346777ba664e3e4b7b399f1eb1a 218 Pfam PF00677 Lumazine binding domain 100 185 2.5E-18 T 06-07-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS11315 392d8346777ba664e3e4b7b399f1eb1a 218 PIRSF PIRSF000498 1 212 3.2E-72 T 06-07-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS11315 392d8346777ba664e3e4b7b399f1eb1a 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 3.0E-79 T 06-07-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS11315 392d8346777ba664e3e4b7b399f1eb1a 218 SUPERFAMILY SSF63380 93 200 1.36E-30 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS00945 30a0c9c46277ec182aef783e41d5e53d 179 Pfam PF00281 Ribosomal protein L5 24 80 9.4E-29 T 06-07-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00945 30a0c9c46277ec182aef783e41d5e53d 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 06-07-2017 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00945 30a0c9c46277ec182aef783e41d5e53d 179 Gene3D G3DSA:3.30.1440.10 2 179 4.0E-80 T 06-07-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00945 30a0c9c46277ec182aef783e41d5e53d 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.689 T 06-07-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00945 30a0c9c46277ec182aef783e41d5e53d 179 SUPERFAMILY SSF55282 4 179 6.36E-79 T 06-07-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00945 30a0c9c46277ec182aef783e41d5e53d 179 PIRSF PIRSF002161 1 179 1.7E-66 T 06-07-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00945 30a0c9c46277ec182aef783e41d5e53d 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.2E-41 T 06-07-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS02905 cb2aad31daa9296742a1787eca872100 525 Gene3D G3DSA:3.90.76.10 39 185 1.6E-33 T 06-07-2017 AM402_RS02905 cb2aad31daa9296742a1787eca872100 525 Gene3D G3DSA:3.10.105.10 288 492 2.6E-41 T 06-07-2017 AM402_RS02905 cb2aad31daa9296742a1787eca872100 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 435 4.9E-80 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS02905 cb2aad31daa9296742a1787eca872100 525 SUPERFAMILY SSF53850 29 517 3.98E-111 T 06-07-2017 AM402_RS02905 cb2aad31daa9296742a1787eca872100 525 Gene3D G3DSA:3.40.190.10 186 287 2.1E-28 T 06-07-2017 AM402_RS02905 cb2aad31daa9296742a1787eca872100 525 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 25 520 3.0E-188 T 06-07-2017 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 AM402_RS02905 cb2aad31daa9296742a1787eca872100 525 PIRSF PIRSF002741 20 525 3.4E-89 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM402_RS11880 5bb35516cb1e6795ca7bf8eba1a6ebfc 539 SUPERFAMILY SSF53850 34 528 7.85E-140 T 06-07-2017 AM402_RS11880 5bb35516cb1e6795ca7bf8eba1a6ebfc 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 455 1.9E-83 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS11880 5bb35516cb1e6795ca7bf8eba1a6ebfc 539 Gene3D G3DSA:3.10.105.10 307 507 2.3E-63 T 06-07-2017 AM402_RS11880 5bb35516cb1e6795ca7bf8eba1a6ebfc 539 Gene3D G3DSA:3.40.190.10 156 306 4.1E-50 T 06-07-2017 AM402_RS11880 5bb35516cb1e6795ca7bf8eba1a6ebfc 539 PIRSF PIRSF002741 1 537 6.0E-118 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM402_RS11880 5bb35516cb1e6795ca7bf8eba1a6ebfc 539 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 105 - T 06-07-2017 IPR023765 Solute-binding protein family 5, conserved site AM402_RS09720 290372f74a1ccf0b498bdea356dc7533 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.1E-26 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM402_RS09720 290372f74a1ccf0b498bdea356dc7533 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 243 1.5E-28 T 06-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM402_RS09720 290372f74a1ccf0b498bdea356dc7533 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 3.4E-47 T 06-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM402_RS09720 290372f74a1ccf0b498bdea356dc7533 260 Pfam PF00460 Flagella basal body rod protein 5 35 7.7E-14 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM402_RS09720 290372f74a1ccf0b498bdea356dc7533 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 5.3E-115 T 06-07-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AM402_RS09720 290372f74a1ccf0b498bdea356dc7533 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site AM402_RS09720 290372f74a1ccf0b498bdea356dc7533 260 SUPERFAMILY SSF117143 94 222 4.58E-33 T 06-07-2017 AM402_RS04920 e7fe3c8f5e3410a2836cf533f4a5240b 356 Gene3D G3DSA:1.10.443.10 129 322 3.4E-25 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS04920 e7fe3c8f5e3410a2836cf533f4a5240b 356 Gene3D G3DSA:1.10.150.130 26 112 3.3E-6 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS04920 e7fe3c8f5e3410a2836cf533f4a5240b 356 Pfam PF00589 Phage integrase family 169 322 6.3E-21 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS04920 e7fe3c8f5e3410a2836cf533f4a5240b 356 SUPERFAMILY SSF56349 22 324 4.71E-30 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS12985 7a0558420deac70f662009a6b9f32f8a 146 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 131 29.675 T 06-07-2017 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 AM402_RS12985 7a0558420deac70f662009a6b9f32f8a 146 SUPERFAMILY SSF103481 5 105 1.44E-15 T 06-07-2017 AM402_RS12985 7a0558420deac70f662009a6b9f32f8a 146 Pfam PF00893 Small Multidrug Resistance protein 3 94 5.9E-22 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 SUPERFAMILY SSF46689 255 304 7.62E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 286 8.9E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 302 8.9E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 SUPERFAMILY SSF46689 203 251 2.0E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 SUPERFAMILY SSF51215 22 80 9.68E-5 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 Pfam PF12852 Cupin 2 186 1.5E-20 T 06-07-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain AM402_RS13875 cd198429525fd903b24212cb6c799396 308 Pfam PF12833 Helix-turn-helix domain 225 303 4.7E-20 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 SMART SM00342 219 302 7.1E-28 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 Gene3D G3DSA:1.10.10.60 257 305 1.2E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13875 cd198429525fd903b24212cb6c799396 308 Gene3D G3DSA:2.60.120.10 25 85 5.5E-4 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS13875 cd198429525fd903b24212cb6c799396 308 Gene3D G3DSA:1.10.10.60 201 256 1.1E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS06685 524a27e23230c9bc47135e8d9708b311 273 Pfam PF02517 CAAX protease self-immunity 171 260 1.4E-18 T 06-07-2017 IPR003675 CAAX amino terminal protease GO:0016020 AM402_RS06685 524a27e23230c9bc47135e8d9708b311 273 Gene3D G3DSA:1.20.120.370 127 159 5.9E-4 T 06-07-2017 IPR027361 Nicotinic acetylcholine-gated receptor, transmembrane domain AM402_RS06685 524a27e23230c9bc47135e8d9708b311 273 Gene3D G3DSA:1.20.120.370 5 72 5.9E-4 T 06-07-2017 IPR027361 Nicotinic acetylcholine-gated receptor, transmembrane domain AM402_RS08345 747bf42c47fdd51ade4cdb3dd7a09e1e 553 Gene3D G3DSA:3.40.50.300 1 206 5.0E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08345 747bf42c47fdd51ade4cdb3dd7a09e1e 553 Gene3D G3DSA:3.40.50.300 431 496 5.0E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08345 747bf42c47fdd51ade4cdb3dd7a09e1e 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 2.4E-18 T 06-07-2017 IPR003395 RecF/RecN/SMC, N-terminal AM402_RS08345 747bf42c47fdd51ade4cdb3dd7a09e1e 553 SUPERFAMILY SSF52540 1 199 2.74E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08345 747bf42c47fdd51ade4cdb3dd7a09e1e 553 SUPERFAMILY SSF52540 362 513 2.74E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08345 747bf42c47fdd51ade4cdb3dd7a09e1e 553 SUPERFAMILY SSF52540 287 333 2.74E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08345 747bf42c47fdd51ade4cdb3dd7a09e1e 553 PIRSF PIRSF003128 1 553 4.5E-154 T 06-07-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM402_RS08345 747bf42c47fdd51ade4cdb3dd7a09e1e 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 6.8E-164 T 06-07-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 06-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 SMART SM00937 63 178 4.9E-69 T 06-07-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 Pfam PF00472 RF-1 domain 216 321 4.3E-42 T 06-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.078 T 06-07-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 SUPERFAMILY SSF75620 12 353 1.57E-138 T 06-07-2017 AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 Pfam PF03462 PCRF domain 12 203 5.1E-76 T 06-07-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 Gene3D G3DSA:1.20.58.410 6 93 1.1E-18 T 06-07-2017 AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 Gene3D G3DSA:3.30.160.20 215 288 4.1E-36 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain AM402_RS13180 dc82324cf38dd0d280c1be4d25d3dae4 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 9.5E-174 T 06-07-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 SUPERFAMILY SSF82679 6 116 5.49E-40 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 Gene3D G3DSA:3.30.70.940 6 116 6.9E-44 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 SUPERFAMILY SSF50104 125 180 8.02E-20 T 06-07-2017 IPR008991 Translation protein SH3-like domain AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 Gene3D G3DSA:2.30.30.30 120 180 5.0E-32 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 Pfam PF02357 Transcription termination factor nusG 7 112 7.4E-28 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 06-07-2017 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.76 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.7E-71 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 SMART SM00739 127 154 1.0E-6 T 06-07-2017 IPR005824 KOW AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 Pfam PF00467 KOW motif 130 162 3.5E-8 T 06-07-2017 IPR005824 KOW AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 SMART SM00738 6 115 1.2E-48 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM402_RS03655 88e79a4dcb268ac7455c1bd9b74f2cf1 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 06-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 SMART SM00387 343 455 1.7E-27 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS10050 4266288dbbf315e312b93ab429548369 458 SUPERFAMILY SSF158472 179 228 1.44E-10 T 06-07-2017 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 Pfam PF00672 HAMP domain 160 227 1.4E-16 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 SUPERFAMILY SSF47384 215 296 2.55E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 SMART SM00304 179 231 3.8E-14 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 SUPERFAMILY SSF55874 285 455 8.25E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS10050 4266288dbbf315e312b93ab429548369 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 452 1.1E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS10050 4266288dbbf315e312b93ab429548369 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.8E-9 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.8E-9 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.8E-9 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 Gene3D G3DSA:3.30.565.10 304 453 5.2E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS10050 4266288dbbf315e312b93ab429548369 458 SMART SM00388 232 296 4.3E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 Gene3D G3DSA:1.10.287.130 224 291 2.0E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS10050 4266288dbbf315e312b93ab429548369 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 295 1.2E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 Pfam PF16031 TonB N-terminal region 29 150 1.2E-10 T 06-07-2017 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 Gene3D G3DSA:3.30.1150.10 138 235 4.4E-10 T 06-07-2017 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 SUPERFAMILY SSF74653 160 229 1.96E-19 T 06-07-2017 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 165 232 1.3E-16 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 ProSitePatterns PS00018 EF-hand calcium-binding domain. 185 197 - T 06-07-2017 IPR018247 EF-Hand 1, calcium-binding site AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 PRINTS PR01374 Gram-negative bacterial tonB protein signature 180 198 3.2E-31 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 PRINTS PR01374 Gram-negative bacterial tonB protein signature 93 103 3.2E-31 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 PRINTS PR01374 Gram-negative bacterial tonB protein signature 199 216 3.2E-31 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 PRINTS PR01374 Gram-negative bacterial tonB protein signature 159 180 3.2E-31 T 06-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM402_RS11940 1a511929a844660d8c47bcf1e4789f83 241 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 165 227 4.7E-17 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS16390 0241eb2156752cc40d144615521a0d88 1118 Pfam PF06120 Tail length tape measure protein 406 565 9.7E-14 T 06-07-2017 IPR009302 Tail length tape measure AM402_RS16390 0241eb2156752cc40d144615521a0d88 1118 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 142 216 4.6E-24 T 06-07-2017 IPR013491 Caudovirus, tape measure, N-terminal AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 Pfam PF01300 Telomere recombination 209 386 1.2E-47 T 06-07-2017 IPR006070 YrdC-like domain GO:0003725 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 ProSitePatterns PS00150 Acylphosphatase signature 1. 9 19 - T 06-07-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 SUPERFAMILY SSF53067 667 762 1.55E-6 T 06-07-2017 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 Pfam PF07503 HypF finger 157 188 3.1E-15 T 06-07-2017 IPR011125 Zinc finger, HypF-type GO:0008270 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 Pfam PF07503 HypF finger 106 139 1.9E-17 T 06-07-2017 IPR011125 Zinc finger, HypF-type GO:0008270 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 SUPERFAMILY SSF54975 5 89 3.49E-18 T 06-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 SUPERFAMILY SSF55821 173 392 2.04E-44 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 PIRSF PIRSF006256 1 766 4.7E-269 T 06-07-2017 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 Pfam PF00708 Acylphosphatase 3 88 1.5E-18 T 06-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 7 762 2.2E-253 T 06-07-2017 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 Gene3D G3DSA:3.90.870.10 199 381 3.3E-41 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AM402_RS10780 827a258112360fac8cc5cc22536ea150 766 Gene3D G3DSA:3.30.70.100 3 88 6.6E-24 T 06-07-2017 AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 Gene3D G3DSA:3.30.460.10 97 246 9.1E-48 T 06-07-2017 AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 Pfam PF12626 Polymerase A arginine-rich C-terminus 392 509 9.5E-43 T 06-07-2017 IPR025866 Polymerase A arginine-rich C-terminal domain AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 62 514 38.233 T 06-07-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 84 516 1.2E-159 T 06-07-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 Gene3D G3DSA:1.10.3090.10 247 482 1.3E-46 T 06-07-2017 AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 SUPERFAMILY SSF81891 245 485 1.44E-50 T 06-07-2017 AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 SUPERFAMILY SSF81301 86 243 4.03E-39 T 06-07-2017 AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 274 335 3.8E-21 T 06-07-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM402_RS18480 b71227370afe16a92c9b637326bf2619 527 Pfam PF01743 Poly A polymerase head domain 115 247 7.4E-39 T 06-07-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 SUPERFAMILY SSF56719 389 623 4.45E-78 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 SUPERFAMILY SSF54211 218 383 9.1E-46 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 Gene3D G3DSA:3.40.50.670 399 607 2.0E-75 T 06-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 SUPERFAMILY SSF55874 6 216 5.11E-67 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 Pfam PF01751 Toprim domain 414 521 2.4E-12 T 06-07-2017 IPR006171 Toprim domain AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 SMART SM00387 28 174 2.0E-22 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 2.9E-19 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 1.0E-23 T 06-07-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 SMART SM00433 35 625 5.7E-210 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 5.1E-60 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 627 0.0 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 06-07-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 Gene3D G3DSA:3.30.230.10 218 391 2.7E-46 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 1.3E-133 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 Pfam PF00204 DNA gyrase B 219 385 2.3E-38 T 06-07-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 Gene3D G3DSA:3.30.565.10 16 216 2.0E-77 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS05955 5eea46dde4f2c5500ea3c04949952502 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 46.632 T 06-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS00385 a74bd19d7b94cafe789d4fabca6b9f7b 424 Pfam PF01145 SPFH domain / Band 7 family 101 272 6.3E-30 T 06-07-2017 IPR001107 Band 7 domain AM402_RS00385 a74bd19d7b94cafe789d4fabca6b9f7b 424 SMART SM00244 97 257 1.6E-40 T 06-07-2017 IPR001107 Band 7 domain AM402_RS00385 a74bd19d7b94cafe789d4fabca6b9f7b 424 TIGRFAM TIGR01933 hflK: HflK protein 99 357 2.7E-112 T 06-07-2017 IPR010201 HflK GO:0016021 AM402_RS00385 a74bd19d7b94cafe789d4fabca6b9f7b 424 Pfam PF12221 Bacterial membrane protein N terminal 1 61 1.7E-6 T 06-07-2017 IPR020980 Menbrane protein HflK, N-terminal AM402_RS00385 a74bd19d7b94cafe789d4fabca6b9f7b 424 SUPERFAMILY SSF117892 130 263 4.18E-19 T 06-07-2017 IPR001107 Band 7 domain AM402_RS20140 7bb381be67f52ae079c362bb4088637e 563 SUPERFAMILY SSF53649 252 545 1.38E-17 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS20140 7bb381be67f52ae079c362bb4088637e 563 Pfam PF00884 Sulfatase 252 540 2.1E-43 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM402_RS20140 7bb381be67f52ae079c362bb4088637e 563 Gene3D G3DSA:3.40.720.10 252 545 1.2E-12 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS20140 7bb381be67f52ae079c362bb4088637e 563 Pfam PF08019 Domain of unknown function (DUF1705) 58 223 8.7E-35 T 06-07-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 Pfam PF03471 Transporter associated domain 206 280 3.8E-22 T 06-07-2017 IPR005170 Transporter-associated domain AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 SMART SM00116 140 188 1.1 T 06-07-2017 IPR000644 CBS domain AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 SMART SM00116 77 126 12.0 T 06-07-2017 IPR000644 CBS domain AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 Pfam PF00571 CBS domain 68 122 1.3E-7 T 06-07-2017 IPR000644 CBS domain AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 Pfam PF00571 CBS domain 140 188 2.3E-5 T 06-07-2017 IPR000644 CBS domain AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 Gene3D G3DSA:3.10.580.10 54 195 2.4E-22 T 06-07-2017 AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 SUPERFAMILY SSF54631 65 201 1.39E-31 T 06-07-2017 AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 Gene3D G3DSA:3.30.465.10 196 282 6.1E-30 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 SUPERFAMILY SSF56176 203 285 2.04E-23 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM402_RS16745 75b0b863eae549d0b14e1ae99a6dccd3 293 SMART SM01091 204 282 2.3E-29 T 06-07-2017 IPR005170 Transporter-associated domain AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 Pfam PF00854 POT family 82 441 1.6E-91 T 06-07-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 487 45.405 T 06-07-2017 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 70 94 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 Gene3D G3DSA:1.20.1250.20 266 486 6.9E-6 T 06-07-2017 AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 Gene3D G3DSA:1.20.1250.20 14 195 1.2E-17 T 06-07-2017 AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 SUPERFAMILY SSF103473 12 205 5.75E-24 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 SUPERFAMILY SSF103473 245 487 5.75E-24 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS18250 192f3db6d17bec376d0ddc2ea86d2880 492 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 484 4.9E-185 T 06-07-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM402_RS14385 66b3f6fa3631766987b096f266000357 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 248 7.4E-60 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AM402_RS14385 66b3f6fa3631766987b096f266000357 413 SUPERFAMILY SSF53901 215 412 3.71E-72 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS14385 66b3f6fa3631766987b096f266000357 413 SMART SM00825 Beta-ketoacyl synthase 6 413 3.3E-15 T 06-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM402_RS14385 66b3f6fa3631766987b096f266000357 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 369 1.7E-39 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal AM402_RS14385 66b3f6fa3631766987b096f266000357 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.2E-190 T 06-07-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM402_RS14385 66b3f6fa3631766987b096f266000357 413 Gene3D G3DSA:3.40.47.10 264 412 1.6E-62 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS14385 66b3f6fa3631766987b096f266000357 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 06-07-2017 IPR018201 Beta-ketoacyl synthase, active site AM402_RS14385 66b3f6fa3631766987b096f266000357 413 PIRSF PIRSF000447 1 413 9.9E-195 T 06-07-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM402_RS14385 66b3f6fa3631766987b096f266000357 413 Gene3D G3DSA:3.40.47.10 3 259 1.7E-77 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS14385 66b3f6fa3631766987b096f266000357 413 SUPERFAMILY SSF53901 3 253 2.41E-77 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 SUPERFAMILY SSF55874 470 593 5.5E-16 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 SMART SM00304 179 232 4.3E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 42 128 6.8E-10 T 06-07-2017 IPR029095 NarX-like, N-terminal AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 Pfam PF00672 HAMP domain 160 228 2.3E-10 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 SMART SM00387 502 595 5.3E-7 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 Pfam PF07730 Histidine kinase 398 461 4.7E-18 T 06-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 Gene3D G3DSA:3.30.565.10 469 594 1.8E-9 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 593 5.3E-7 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 PIRSF PIRSF003167 2 605 4.8E-182 T 06-07-2017 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM402_RS20175 6cc1cdbf29a2b282ebbddc67a6ce9767 609 SUPERFAMILY SSF158472 179 230 7.19E-7 T 06-07-2017 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 06-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 PIRSF PIRSF006334 14 285 1.5E-105 T 06-07-2017 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 4.0E-12 T 06-07-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 275 5.1E-45 T 06-07-2017 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 Gene3D G3DSA:3.40.140.10 185 275 7.7E-22 T 06-07-2017 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 Gene3D G3DSA:3.40.140.10 32 177 1.5E-47 T 06-07-2017 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 47.74 T 06-07-2017 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 30 273 2.6E-88 T 06-07-2017 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 SUPERFAMILY SSF53927 152 275 3.47E-35 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AM402_RS15760 9affd91aa5fc201ca5971226458e6024 294 SUPERFAMILY SSF53927 1 149 9.7E-44 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AM402_RS05905 48b2af9fcae5c1d04f3969d19201e4c2 435 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 28 240 5.6E-8 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS05905 48b2af9fcae5c1d04f3969d19201e4c2 435 SUPERFAMILY SSF52540 1 250 3.02E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05905 48b2af9fcae5c1d04f3969d19201e4c2 435 SMART SM00382 24 261 9.4E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS05905 48b2af9fcae5c1d04f3969d19201e4c2 435 Gene3D G3DSA:3.40.50.300 4 250 2.6E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01800 789df4a5e59cbd85e5b00ccb5638f875 223 Pfam PF04002 RadC-like JAB domain 103 221 3.1E-44 T 06-07-2017 IPR025657 RadC-like JAB domain AM402_RS01800 789df4a5e59cbd85e5b00ccb5638f875 223 SUPERFAMILY SSF47781 17 87 5.06E-5 T 06-07-2017 IPR010994 RuvA domain 2-like AM402_RS01800 789df4a5e59cbd85e5b00ccb5638f875 223 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 172 177 - T 06-07-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site AM402_RS01800 789df4a5e59cbd85e5b00ccb5638f875 223 Gene3D G3DSA:3.40.140.10 100 223 4.2E-48 T 06-07-2017 AM402_RS01800 789df4a5e59cbd85e5b00ccb5638f875 223 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 223 3.9E-80 T 06-07-2017 IPR001405 RadC protein AM402_RS13175 19099277623313fa5489d30cdc5ec36d 282 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 275 44.582 T 06-07-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM402_RS13175 19099277623313fa5489d30cdc5ec36d 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS13175 19099277623313fa5489d30cdc5ec36d 282 Pfam PF13847 Methyltransferase domain 109 243 4.7E-23 T 06-07-2017 IPR025714 Methyltransferase domain AM402_RS13175 19099277623313fa5489d30cdc5ec36d 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 2.3E-89 T 06-07-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM402_RS13175 19099277623313fa5489d30cdc5ec36d 282 Gene3D G3DSA:3.40.50.150 86 275 1.4E-66 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS13175 19099277623313fa5489d30cdc5ec36d 282 Gene3D G3DSA:1.10.8.10 1 84 6.1E-28 T 06-07-2017 AM402_RS13175 19099277623313fa5489d30cdc5ec36d 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 277 2.0E-92 T 06-07-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM402_RS13175 19099277623313fa5489d30cdc5ec36d 282 SUPERFAMILY SSF53335 3 273 1.13E-57 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15875 71a8660671f4abda2d49436f739ac6f3 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 06-07-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS15875 71a8660671f4abda2d49436f739ac6f3 310 PIRSF PIRSF006621 1 310 4.7E-80 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS15875 71a8660671f4abda2d49436f739ac6f3 310 SUPERFAMILY SSF51395 2 308 2.75E-71 T 06-07-2017 AM402_RS15875 71a8660671f4abda2d49436f739ac6f3 310 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.086 T 06-07-2017 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AM402_RS15875 71a8660671f4abda2d49436f739ac6f3 310 Pfam PF01207 Dihydrouridine synthase (Dus) 5 284 1.5E-81 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS15875 71a8660671f4abda2d49436f739ac6f3 310 Gene3D G3DSA:3.20.20.70 2 239 2.6E-63 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS17830 0904ee34a26d6ff567280f0d9d8f9ec9 122 Pfam PF11190 Protein of unknown function (DUF2976) 34 120 7.9E-31 T 06-07-2017 IPR021356 Integrating conjugative element protein PFL4702 AM402_RS17830 0904ee34a26d6ff567280f0d9d8f9ec9 122 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 24 121 6.4E-33 T 06-07-2017 IPR021356 Integrating conjugative element protein PFL4702 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 SUPERFAMILY SSF51120 466 588 6.19E-22 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 SUPERFAMILY SSF51120 354 489 1.7E-27 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 PRINTS PR00313 NodO calcium binding signature 466 474 5.3E-11 T 06-07-2017 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 PRINTS PR00313 NodO calcium binding signature 553 562 5.3E-11 T 06-07-2017 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 PRINTS PR00313 NodO calcium binding signature 454 465 5.3E-11 T 06-07-2017 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 PRINTS PR00313 NodO calcium binding signature 475 483 5.3E-11 T 06-07-2017 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Gene3D G3DSA:3.40.390.10 278 355 8.2E-25 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Gene3D G3DSA:3.40.390.10 81 224 8.2E-25 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Pfam PF00413 Matrixin 139 334 7.3E-6 T 06-07-2017 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 457 478 6.2E-7 T 06-07-2017 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 262 286 6.2E-7 T 06-07-2017 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Gene3D G3DSA:2.150.10.10 369 474 2.5E-17 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Gene3D G3DSA:2.150.10.10 475 612 1.1E-22 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 438 454 0.84 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 474 491 6.7E-4 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 526 542 0.68 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 456 472 0.027 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 505 518 3.0 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 551 560 6.4 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 SUPERFAMILY SSF55486 280 352 1.13E-22 T 06-07-2017 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 SUPERFAMILY SSF55486 127 226 1.13E-22 T 06-07-2017 AM402_RS18070 5d11bf42e329488521fa2440302cf2de 654 Pfam PF08548 Peptidase M10 serralysin C terminal 355 646 1.0E-42 T 06-07-2017 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM402_RS11650 cb9476920be2414c8ed768370730037b 112 Pfam PF10543 ORF6N domain 12 93 4.5E-15 T 06-07-2017 IPR018873 KilA-N, DNA-binding domain AM402_RS05485 96d57d0abf27949400b859456f67a1a6 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 165 6.2E-45 T 06-07-2017 IPR001405 RadC protein AM402_RS05485 96d57d0abf27949400b859456f67a1a6 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 06-07-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site AM402_RS05485 96d57d0abf27949400b859456f67a1a6 165 Pfam PF04002 RadC-like JAB domain 44 163 2.0E-44 T 06-07-2017 IPR025657 RadC-like JAB domain AM402_RS05485 96d57d0abf27949400b859456f67a1a6 165 Gene3D G3DSA:3.40.140.10 42 165 5.9E-49 T 06-07-2017 AM402_RS05485 96d57d0abf27949400b859456f67a1a6 165 SUPERFAMILY SSF102712 57 132 1.44E-6 T 06-07-2017 AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 424 34.055 T 06-07-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 Pfam PF13393 Histidyl-tRNA synthetase 10 313 3.0E-45 T 06-07-2017 AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 Gene3D G3DSA:3.40.50.800 332 422 2.8E-28 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 SUPERFAMILY SSF52954 333 422 1.96E-22 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 414 6.9E-157 T 06-07-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 SUPERFAMILY SSF55681 4 320 3.06E-104 T 06-07-2017 AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 Gene3D G3DSA:3.30.930.10 223 322 2.4E-98 T 06-07-2017 AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 Gene3D G3DSA:3.30.930.10 3 187 2.4E-98 T 06-07-2017 AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 PIRSF PIRSF001549 2 424 6.5E-128 T 06-07-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AM402_RS08645 f578d682e31606b141e0c0dd9029f201 427 Pfam PF03129 Anticodon binding domain 335 421 5.5E-10 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS05625 9982cb653c27cc907b83ff0228f7c204 88 SUPERFAMILY SSF57716 38 72 5.7E-7 T 06-07-2017 AM402_RS05625 9982cb653c27cc907b83ff0228f7c204 88 ProSitePatterns PS01242 Zinc finger FPG-type signature. 39 64 - T 06-07-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM402_RS05625 9982cb653c27cc907b83ff0228f7c204 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 1.3E-11 T 06-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM402_RS18535 4363713bf9061a1679ad1b10359b37bb 444 Gene3D G3DSA:3.40.50.1100 182 440 9.8E-42 T 06-07-2017 AM402_RS18535 4363713bf9061a1679ad1b10359b37bb 444 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 101 404 4.3E-50 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS18535 4363713bf9061a1679ad1b10359b37bb 444 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 110 124 - T 06-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM402_RS18535 4363713bf9061a1679ad1b10359b37bb 444 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 444 267.79 T 06-07-2017 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM402_RS18535 4363713bf9061a1679ad1b10359b37bb 444 SUPERFAMILY SSF53686 83 440 5.62E-54 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS18535 4363713bf9061a1679ad1b10359b37bb 444 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 14 440 4.6E-220 T 06-07-2017 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM402_RS00165 86a6a372d56ac211752fe03d121bbfc1 280 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS00165 86a6a372d56ac211752fe03d121bbfc1 280 Gene3D G3DSA:3.20.20.20 12 274 1.2E-111 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS00165 86a6a372d56ac211752fe03d121bbfc1 280 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS00165 86a6a372d56ac211752fe03d121bbfc1 280 Pfam PF00809 Pterin binding enzyme 18 257 1.3E-89 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS00165 86a6a372d56ac211752fe03d121bbfc1 280 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 3.6E-104 T 06-07-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM402_RS00165 86a6a372d56ac211752fe03d121bbfc1 280 SUPERFAMILY SSF51717 7 274 3.14E-106 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS05965 55a947e8ed8d15287970765e44d6b759 249 Gene3D G3DSA:3.40.1130.10 46 242 2.8E-21 T 06-07-2017 AM402_RS05965 55a947e8ed8d15287970765e44d6b759 249 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.8E-47 T 06-07-2017 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AM402_RS05965 55a947e8ed8d15287970765e44d6b759 249 SMART SM00563 67 182 2.8E-39 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM402_RS05965 55a947e8ed8d15287970765e44d6b759 249 Pfam PF01553 Acyltransferase 61 180 4.1E-33 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM402_RS05965 55a947e8ed8d15287970765e44d6b759 249 SUPERFAMILY SSF69593 8 238 6.54E-59 T 06-07-2017 AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 Gene3D G3DSA:1.10.10.60 225 274 2.3E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 SMART SM00342 189 272 3.1E-23 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 4.2E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 4.2E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 Pfam PF07883 Cupin domain 29 81 9.6E-9 T 06-07-2017 IPR013096 Cupin 2, conserved barrel AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 Pfam PF12833 Helix-turn-helix domain 199 273 5.8E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 Gene3D G3DSA:2.60.120.10 27 96 3.8E-13 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 SUPERFAMILY SSF46689 225 276 1.52E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02875 4ee28a7bfb5e1e6b3fc3cb0aedf70437 282 SUPERFAMILY SSF51182 19 94 4.64E-14 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 SUPERFAMILY SSF102114 114 371 3.79E-56 T 06-07-2017 AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 4.0E-196 T 06-07-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 63.794 T 06-07-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 Gene3D G3DSA:3.80.30.20 138 377 2.1E-78 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 6.2E-111 T 06-07-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 SMART SM00729 140 365 3.1E-57 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 Gene3D G3DSA:2.40.50.140 380 442 3.4E-26 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 Pfam PF04055 Radical SAM superfamily 146 323 6.9E-33 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 06-07-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM402_RS01670 72ceeb4db87940316d776448ee344b90 443 Pfam PF00919 Uncharacterized protein family UPF0004 9 94 3.3E-21 T 06-07-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 Gene3D G3DSA:1.20.120.30 37 182 3.9E-33 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.4E-83 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.4E-83 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 3.4E-83 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 476 3.4E-83 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 214 3.4E-83 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 293 322 3.4E-83 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 3.4E-83 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 SMART SM00304 219 271 7.7E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 Pfam PF02203 Tar ligand binding domain homologue 1 173 2.9E-31 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 SMART SM00283 272 519 4.7E-96 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 297 319 - T 06-07-2017 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 Pfam PF00672 HAMP domain 199 267 6.4E-12 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 Gene3D G3DSA:1.10.287.950 287 491 5.5E-64 T 06-07-2017 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 SMART SM00319 44 185 1.3E-6 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 SUPERFAMILY SSF58104 239 520 6.8E-75 T 06-07-2017 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 SUPERFAMILY SSF47170 25 180 7.98E-25 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS09625 fa23bea65851bdb1ed1bdf39d1149936 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 518 3.6E-65 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 SUPERFAMILY SSF52954 464 570 8.0E-33 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 1.2E-22 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 Gene3D G3DSA:3.40.50.800 472 570 3.1E-32 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 SUPERFAMILY SSF55826 218 390 5.62E-29 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 Pfam PF03129 Anticodon binding domain 475 568 3.4E-22 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 4.7E-49 T 06-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.649 T 06-07-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 Gene3D G3DSA:3.30.930.10 389 471 2.1E-108 T 06-07-2017 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 Gene3D G3DSA:3.30.930.10 10 234 2.1E-108 T 06-07-2017 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.2E-19 T 06-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 5.2E-19 T 06-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 5.2E-19 T 06-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 5.2E-19 T 06-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 1.2E-265 T 06-07-2017 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 SUPERFAMILY SSF55681 407 478 3.56E-108 T 06-07-2017 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 SUPERFAMILY SSF55681 10 237 3.56E-108 T 06-07-2017 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 PIRSF PIRSF001535 1 571 3.2E-273 T 06-07-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM402_RS06350 dfab684f5328b49a72248e5920aeb355 571 Gene3D G3DSA:3.90.960.10 254 388 8.4E-29 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 Gene3D G3DSA:3.40.50.170 87 278 5.1E-55 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 1.7E-67 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 1.7E-67 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 1.7E-67 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 1.7E-67 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 1.7E-67 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 1.7E-67 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 PIRSF PIRSF036480 6 282 1.2E-115 T 06-07-2017 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 Pfam PF01842 ACT domain 10 70 3.3E-7 T 06-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 SUPERFAMILY SSF53328 88 281 3.01E-59 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 282 1.9E-127 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 45.804 T 06-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 Gene3D G3DSA:3.30.70.260 5 74 1.5E-12 T 06-07-2017 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 SUPERFAMILY SSF55021 9 58 1.75E-8 T 06-07-2017 AM402_RS10855 fec027a3e2e081eb5319613aefe6b808 282 Pfam PF00551 Formyl transferase 88 264 2.0E-51 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS18790 81a0518fb9beed2886c46aa0dbe7c18a 120 Pfam PF10757 Biofilm formation regulator YbaJ 1 114 1.6E-35 T 06-07-2017 IPR019693 Biofilm formation regulator YbaJ AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 9.3E-56 T 06-07-2017 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 Gene3D G3DSA:1.10.1660.10 63 136 7.8E-27 T 06-07-2017 AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 Gene3D G3DSA:1.10.1660.10 8 62 2.7E-24 T 06-07-2017 AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 SUPERFAMILY SSF46955 8 129 1.5E-29 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 Pfam PF09278 MerR, DNA binding 51 113 4.2E-18 T 06-07-2017 IPR015358 Transcription regulator MerR, DNA binding AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 Pfam PF00376 MerR family regulatory protein 9 46 1.1E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.9E-26 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.9E-26 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.9E-26 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21940 5204afaa252b7d9f88291a91da04c2e3 151 SMART SM00422 8 77 1.7E-30 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 124 331 2.7E-75 T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 SUPERFAMILY SSF51246 338 454 8.89E-39 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 Gene3D G3DSA:2.40.50.100 513 580 2.0E-16 T 06-07-2017 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 Gene3D G3DSA:3.40.50.20 12 138 6.2E-46 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 Gene3D G3DSA:3.30.1490.20 139 211 2.0E-21 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 538 555 - T 06-07-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 Pfam PF00364 Biotin-requiring enzyme 524 580 2.1E-11 T 06-07-2017 IPR000089 Biotin/lipoyl attachment AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 SMART SM00878 344 451 3.0E-58 T 06-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 SUPERFAMILY SSF52440 5 122 1.37E-43 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 Gene3D G3DSA:3.30.470.20 212 455 7.9E-92 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 SUPERFAMILY SSF56059 92 334 1.13E-57 T 06-07-2017 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 SUPERFAMILY SSF51230 512 580 3.93E-15 T 06-07-2017 IPR011053 Single hybrid motif AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 Pfam PF00289 Biotin carboxylase, N-terminal domain 12 119 1.3E-41 T 06-07-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS20205 ff01e87aab3bb6b9101087970be2ce2b 581 Pfam PF02785 Biotin carboxylase C-terminal domain 344 451 4.7E-39 T 06-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS15955 a67d56a948c476f184d7881cebad1f60 255 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 16 250 2.7E-64 T 06-07-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AM402_RS15955 a67d56a948c476f184d7881cebad1f60 255 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 7 254 27.397 T 06-07-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AM402_RS15955 a67d56a948c476f184d7881cebad1f60 255 SUPERFAMILY SSF53335 13 191 5.43E-33 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15955 a67d56a948c476f184d7881cebad1f60 255 Gene3D G3DSA:3.40.50.150 11 199 3.7E-32 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15955 a67d56a948c476f184d7881cebad1f60 255 Pfam PF08241 Methyltransferase domain 50 141 5.0E-19 T 06-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM402_RS11775 658521251edea82601b9fec25786b8ea 370 Gene3D G3DSA:3.30.420.40 5 196 1.9E-73 T 06-07-2017 AM402_RS11775 658521251edea82601b9fec25786b8ea 370 SUPERFAMILY SSF53067 143 340 4.66E-23 T 06-07-2017 AM402_RS11775 658521251edea82601b9fec25786b8ea 370 SUPERFAMILY SSF53067 66 111 4.66E-23 T 06-07-2017 AM402_RS11775 658521251edea82601b9fec25786b8ea 370 SUPERFAMILY SSF53067 6 36 4.66E-23 T 06-07-2017 AM402_RS11775 658521251edea82601b9fec25786b8ea 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.721 T 06-07-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AM402_RS11775 658521251edea82601b9fec25786b8ea 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 366 5.2E-167 T 06-07-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 Gene3D G3DSA:1.10.10.60 58 115 2.4E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 SUPERFAMILY SSF46689 57 109 1.97E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 SUPERFAMILY SSF46689 5 54 6.72E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 Gene3D G3DSA:3.20.80.10 127 297 8.0E-45 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 Pfam PF14526 Integron-associated effector binding protein 130 297 8.1E-19 T 06-07-2017 IPR029441 Integron-associated effector binding protein AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 Pfam PF12833 Helix-turn-helix domain 27 105 2.3E-17 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 Gene3D G3DSA:1.10.10.60 3 57 2.6E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 SMART SM00342 21 104 5.5E-30 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 SUPERFAMILY SSF55136 128 274 3.14E-19 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.2E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS14935 3de35a6e71af57878dd7f8c9c38a0899 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.2E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 Gene3D G3DSA:3.30.70.120 1 112 1.8E-51 T 06-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 06-07-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.2E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 06-07-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 PRINTS PR00340 P-II protein signature 23 41 6.4E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 PRINTS PR00340 P-II protein signature 52 75 6.4E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 PRINTS PR00340 P-II protein signature 83 103 6.4E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 PRINTS PR00340 P-II protein signature 2 17 6.4E-44 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 SUPERFAMILY SSF54913 1 112 4.77E-47 T 06-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 SMART SM00938 4 105 1.1E-67 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS08515 055927ce19fd4b1ee4d62c1aceb25843 112 PIRSF PIRSF039144 1 112 7.2E-58 T 06-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM402_RS05505 9f7cbb88b46646e757674b3541e7edc3 547 Gene3D G3DSA:3.40.50.300 209 278 2.9E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05505 9f7cbb88b46646e757674b3541e7edc3 547 Gene3D G3DSA:3.40.50.300 346 384 2.9E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05505 9f7cbb88b46646e757674b3541e7edc3 547 Gene3D G3DSA:3.40.50.300 418 450 2.9E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05505 9f7cbb88b46646e757674b3541e7edc3 547 Pfam PF07728 AAA domain (dynein-related subfamily) 221 443 2.7E-9 T 06-07-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM402_RS05505 9f7cbb88b46646e757674b3541e7edc3 547 SUPERFAMILY SSF52540 206 270 5.83E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05505 9f7cbb88b46646e757674b3541e7edc3 547 SUPERFAMILY SSF52540 320 443 5.83E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20325 62ffcb2c21f3e20378de893cf64f5dc6 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 20 250 4.4E-103 T 06-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM402_RS20325 62ffcb2c21f3e20378de893cf64f5dc6 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 2.2E-86 T 06-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM402_RS20325 62ffcb2c21f3e20378de893cf64f5dc6 251 SUPERFAMILY SSF53335 16 248 1.49E-50 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS20325 62ffcb2c21f3e20378de893cf64f5dc6 251 Gene3D G3DSA:3.40.50.150 23 247 4.2E-58 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS20325 62ffcb2c21f3e20378de893cf64f5dc6 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 06-07-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM402_RS20325 62ffcb2c21f3e20378de893cf64f5dc6 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 38.931 T 06-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 SUPERFAMILY SSF56784 5 225 2.67E-59 T 06-07-2017 IPR023214 HAD-like domain AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 Gene3D G3DSA:1.10.150.240 26 84 3.8E-18 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 195 1.5E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 Gene3D G3DSA:3.40.50.1000 85 226 4.0E-44 T 06-07-2017 IPR023214 HAD-like domain AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 189 7.9E-11 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 195 3.0E-39 T 06-07-2017 IPR023214 HAD-like domain AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 225 1.6E-65 T 06-07-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 158 178 1.6E-10 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 1.6E-10 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.6E-10 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS02460 f371969dd2a4e1101bab447b7a9b220b 236 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 1.6E-10 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS16280 5ddc7c22ce9ae10f87b2668256f99892 99 SUPERFAMILY SSF47598 51 87 5.19E-5 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AM402_RS16280 5ddc7c22ce9ae10f87b2668256f99892 99 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 90 1.1E-7 T 06-07-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM402_RS16930 a5061be30d84d0ba915bda29cf64e9b2 402 Gene3D G3DSA:1.20.1250.20 221 396 3.5E-13 T 06-07-2017 AM402_RS16930 a5061be30d84d0ba915bda29cf64e9b2 402 Gene3D G3DSA:1.20.1250.20 15 193 1.9E-23 T 06-07-2017 AM402_RS16930 a5061be30d84d0ba915bda29cf64e9b2 402 Pfam PF07690 Major Facilitator Superfamily 20 317 9.3E-31 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS16930 a5061be30d84d0ba915bda29cf64e9b2 402 SUPERFAMILY SSF103473 8 394 6.41E-51 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS21925 64085292064006297e9baf63dc987199 141 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 141 1.0E-55 T 06-07-2017 IPR004891 MerC mercury resistance protein AM402_RS21925 64085292064006297e9baf63dc987199 141 Pfam PF03203 MerC mercury resistance protein 10 121 4.1E-19 T 06-07-2017 IPR004891 MerC mercury resistance protein AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 6.6E-45 T 06-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 Pfam PF08335 GlnD PII-uridylyltransferase 824 915 6.0E-12 T 06-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 SUPERFAMILY SSF81593 818 942 1.49E-31 T 06-07-2017 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 SUPERFAMILY SSF81301 524 811 1.31E-86 T 06-07-2017 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 SUPERFAMILY SSF81301 29 286 8.18E-86 T 06-07-2017 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 SUPERFAMILY SSF81593 287 436 5.57E-43 T 06-07-2017 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 552 804 4.4E-97 T 06-07-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 275 3.1E-91 T 06-07-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 944 19.214 T 06-07-2017 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 Gene3D G3DSA:3.30.460.10 638 810 1.4E-59 T 06-07-2017 AM402_RS05890 e9077ca804d6acce7e78680c0dea0efb 944 Gene3D G3DSA:3.30.460.10 115 285 7.2E-61 T 06-07-2017 AM402_RS05040 42cff8321737366080f33ce981b4f98b 316 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 202 215 - T 06-07-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05040 42cff8321737366080f33ce981b4f98b 316 Pfam PF00146 NADH dehydrogenase 16 311 8.6E-53 T 06-07-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS08335 222e72b2060ef4bf2eae98cb2c4f39f1 97 Pfam PF03658 RnfH family Ubiquitin 4 86 8.7E-33 T 06-07-2017 IPR005346 RnfH protein AM402_RS08335 222e72b2060ef4bf2eae98cb2c4f39f1 97 Gene3D G3DSA:3.10.20.280 3 88 1.0E-34 T 06-07-2017 IPR005346 RnfH protein AM402_RS08335 222e72b2060ef4bf2eae98cb2c4f39f1 97 SUPERFAMILY SSF54285 3 78 6.67E-25 T 06-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM402_RS08335 222e72b2060ef4bf2eae98cb2c4f39f1 97 Hamap MF_00460 Protein RnfH [rnfH]. 4 94 24.115 T 06-07-2017 IPR005346 RnfH protein AM402_RS16815 c3c3f0ad316e878f8c4a48c8a75d5df9 223 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 13 223 31.697 T 06-07-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 AM402_RS16815 c3c3f0ad316e878f8c4a48c8a75d5df9 223 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 15 74 2.9E-10 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS16815 c3c3f0ad316e878f8c4a48c8a75d5df9 223 Gene3D G3DSA:3.40.50.620 14 223 3.7E-68 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS16815 c3c3f0ad316e878f8c4a48c8a75d5df9 223 Pfam PF01467 Cytidylyltransferase-like 17 197 2.0E-31 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS16815 c3c3f0ad316e878f8c4a48c8a75d5df9 223 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 17 222 1.9E-60 T 06-07-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 AM402_RS16815 c3c3f0ad316e878f8c4a48c8a75d5df9 223 SUPERFAMILY SSF52374 15 223 1.75E-58 T 06-07-2017 AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 Gene3D G3DSA:3.30.70.20 14 59 2.3E-12 T 06-07-2017 AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 Gene3D G3DSA:3.30.70.20 206 232 2.2E-12 T 06-07-2017 AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 Pfam PF00037 4Fe-4S binding domain 193 215 1.4E-5 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 SUPERFAMILY SSF54862 13 78 9.34E-15 T 06-07-2017 AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 SUPERFAMILY SSF54862 180 248 2.79E-15 T 06-07-2017 AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 Gene3D G3DSA:3.30.70.20 60 79 6.6E-12 T 06-07-2017 AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 Gene3D G3DSA:3.30.70.20 181 205 6.6E-12 T 06-07-2017 AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 Gene3D G3DSA:3.30.70.20 233 270 7.3E-4 T 06-07-2017 AM402_RS12730 b5ea6f11bb0e0b2667e738333c4472ab 294 Pfam PF12838 4Fe-4S dicluster domain 29 69 1.7E-6 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 SUPERFAMILY SSF56672 18 184 1.56E-5 T 06-07-2017 AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 24 224 3.7E-21 T 06-07-2017 IPR000477 Reverse transcriptase domain AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 62 76 5.0E-29 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 19 32 5.0E-29 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 131 144 5.0E-29 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 33 45 5.0E-29 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 164 175 5.0E-29 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 219 225 5.0E-29 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS08290 2c0d6a2eab38119fb08b3394a0bf1f31 295 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 78 96 5.0E-29 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS01055 5c4566a6eba2f8db189279ccba3545f7 315 Hamap MF_00215 Pantothenate kinase [coaA]. 1 315 186.686 T 06-07-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM402_RS01055 5c4566a6eba2f8db189279ccba3545f7 315 SUPERFAMILY SSF52540 10 314 3.55E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01055 5c4566a6eba2f8db189279ccba3545f7 315 PIRSF PIRSF000545 1 315 1.3E-149 T 06-07-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM402_RS01055 5c4566a6eba2f8db189279ccba3545f7 315 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 89 242 7.6E-17 T 06-07-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 AM402_RS01055 5c4566a6eba2f8db189279ccba3545f7 315 Gene3D G3DSA:3.40.50.300 9 315 9.2E-111 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01055 5c4566a6eba2f8db189279ccba3545f7 315 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 9 315 1.1E-166 T 06-07-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 2676 2745 2.6E-24 T 06-07-2017 IPR020972 Dermonecrotic/RTX toxin C-terminal AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 2001 2068 1.3E-26 T 06-07-2017 IPR020972 Dermonecrotic/RTX toxin C-terminal AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 SUPERFAMILY SSF158842 1985 2228 3.92E-70 T 06-07-2017 AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 SUPERFAMILY SSF158842 2660 2903 5.1E-68 T 06-07-2017 AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF12146 Serine aminopeptidase, S33 3280 3421 1.7E-11 T 06-07-2017 IPR022742 Serine aminopeptidase, S33 AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF11713 Peptidase C80 family 3533 3689 1.3E-47 T 06-07-2017 IPR020974 CGT/MARTX, cysteine protease (CPD) domain AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 SUPERFAMILY SSF51120 4341 4546 1.12E-12 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 SUPERFAMILY SSF53474 3251 3402 5.91E-22 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Gene3D G3DSA:2.150.10.10 4319 4534 9.6E-17 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Gene3D G3DSA:3.40.50.1820 3253 3395 1.5E-50 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Gene3D G3DSA:3.40.50.1820 4541 4559 1.5E-50 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 834 851 0.2 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1177 1194 22.0 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 678 690 2.7 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 739 752 0.14 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 853 869 31.0 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 720 735 1.1 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1082 1097 0.22 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 950 961 3.4 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1044 1055 21.0 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 815 832 10.0 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1159 1175 5.7 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1106 1118 5.0 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 255 272 7.3 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 121 137 2.3 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1215 1232 0.23 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 758 774 0.19 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 540 557 0.0077 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 968 980 1.8 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1007 1021 0.32 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 931 945 0.54 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1063 1076 0.16 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 1120 1136 15.0 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 141 158 0.0082 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 500 517 3.1 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 777 791 6.7 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 891 907 0.12 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 910 923 2.7 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 986 999 27.0 T 06-07-2017 IPR011509 RtxA toxin AM402_RS07575 d58b6253f9f8fc960a0501e371ffea3b 4619 Pfam PF07634 RtxA repeat 796 809 0.64 T 06-07-2017 IPR011509 RtxA toxin AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 Gene3D G3DSA:3.40.630.10 397 483 9.1E-109 T 06-07-2017 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 Gene3D G3DSA:3.40.630.10 3 181 9.1E-109 T 06-07-2017 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 9.6E-183 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 Pfam PF07687 Peptidase dimerisation domain 213 291 7.1E-8 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 SUPERFAMILY SSF53187 10 182 6.0E-65 T 06-07-2017 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 SUPERFAMILY SSF53187 397 481 6.0E-65 T 06-07-2017 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 3.3E-22 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PIRSF PIRSF016599 1 485 3.9E-211 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS17195 22cac3f462162ce0900bedfc636da392 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 2.0E-96 T 06-07-2017 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AM402_RS09445 0d75e7be22d1a9c11aeba1d2d461faed 186 Pfam PF01381 Helix-turn-helix 15 68 2.3E-16 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS09445 0d75e7be22d1a9c11aeba1d2d461faed 186 Gene3D G3DSA:1.10.260.40 11 105 6.1E-23 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS09445 0d75e7be22d1a9c11aeba1d2d461faed 186 SUPERFAMILY SSF51182 54 182 6.88E-20 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS09445 0d75e7be22d1a9c11aeba1d2d461faed 186 Gene3D G3DSA:2.60.120.10 106 184 2.8E-21 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS09445 0d75e7be22d1a9c11aeba1d2d461faed 186 SUPERFAMILY SSF47413 9 75 8.45E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS09445 0d75e7be22d1a9c11aeba1d2d461faed 186 SMART SM00530 14 69 5.2E-15 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 SUPERFAMILY SSF54913 226 298 2.33E-21 T 06-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.464 T 06-07-2017 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 6.7E-49 T 06-07-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 06-07-2017 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.1E-57 T 06-07-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 Pfam PF08029 HisG, C-terminal domain 223 296 2.4E-23 T 06-07-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 Gene3D G3DSA:3.30.70.120 226 299 4.8E-30 T 06-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 SUPERFAMILY SSF53850 6 224 6.03E-71 T 06-07-2017 AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 Gene3D G3DSA:3.40.190.10 3 139 2.9E-52 T 06-07-2017 AM402_RS15660 016058ab2f9d1dcf24bfd899805eaae5 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 298 1.0E-30 T 06-07-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 SUPERFAMILY SSF53335 262 340 6.27E-61 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 SUPERFAMILY SSF53335 7 185 6.27E-61 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 Pfam PF01555 DNA methylase 25 336 4.0E-43 T 06-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 Gene3D G3DSA:3.40.50.150 172 234 2.4E-4 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 Gene3D G3DSA:3.40.50.150 259 341 5.6E-57 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 Gene3D G3DSA:3.40.50.150 4 148 5.6E-57 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 278 295 1.6E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 297 315 1.6E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 24 38 1.6E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 59 79 1.6E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 320 340 1.6E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14750 0b93472ff12fd1d95f619ad4b0ffa20f 344 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 28 34 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS15110 707967132aecfaf03713523491c14cd3 404 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 399 48.591 T 06-07-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM402_RS15110 707967132aecfaf03713523491c14cd3 404 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 398 4.6E-82 T 06-07-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM402_RS15110 707967132aecfaf03713523491c14cd3 404 Gene3D G3DSA:3.20.140.10 5 398 4.0E-146 T 06-07-2017 AM402_RS15110 707967132aecfaf03713523491c14cd3 404 PIRSF PIRSF000484 3 382 2.6E-61 T 06-07-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM402_RS15110 707967132aecfaf03713523491c14cd3 404 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 398 7.1E-163 T 06-07-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM402_RS15110 707967132aecfaf03713523491c14cd3 404 SUPERFAMILY SSF51690 121 397 4.51E-88 T 06-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM402_RS15110 707967132aecfaf03713523491c14cd3 404 SUPERFAMILY SSF54675 5 139 9.71E-44 T 06-07-2017 AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 SUPERFAMILY SSF52540 841 936 1.5E-14 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 SUPERFAMILY SSF52540 1082 1218 1.5E-14 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 SUPERFAMILY SSF52540 970 1045 1.5E-14 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 Pfam PF13555 P-loop containing region of AAA domain 26 58 1.6E-6 T 06-07-2017 AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 Gene3D G3DSA:3.40.50.300 707 772 8.4E-4 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 Gene3D G3DSA:3.40.50.300 1 168 1.4E-25 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 SUPERFAMILY SSF52540 1 302 1.95E-28 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1113 1184 1.2E-13 T 06-07-2017 AM402_RS19155 4c3c9d7fd070208cbef9c0541b2742ef 1241 Gene3D G3DSA:3.40.50.300 1121 1204 1.3E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:1.20.1580.10 91 129 1.2E-53 T 06-07-2017 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:1.20.1580.10 251 284 1.2E-53 T 06-07-2017 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:1.20.1580.10 407 477 1.2E-53 T 06-07-2017 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 06-07-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.981 T 06-07-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:3.30.1490.20 200 243 2.1E-27 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:3.30.1490.20 130 153 2.1E-27 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 SUPERFAMILY SSF52540 617 910 9.55E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:3.40.50.300 478 595 2.0E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:3.40.50.300 2 51 2.0E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:3.40.50.300 612 670 1.8E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:3.40.50.300 821 938 1.8E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:1.20.1580.10 694 820 4.1E-54 T 06-07-2017 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Gene3D G3DSA:1.10.8.280 286 406 1.0E-43 T 06-07-2017 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 Pfam PF00005 ABC transporter 806 860 6.0E-5 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 SUPERFAMILY SSF52540 4 204 7.62E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03900 bb7070b23c0e9874d92217d82c7a292d 944 SUPERFAMILY SSF52540 430 569 7.62E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11065 a7ab8fc6bcf1e56f95fccf0ab37e7d26 142 PIRSF PIRSF006276 1 142 4.6E-21 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS11065 a7ab8fc6bcf1e56f95fccf0ab37e7d26 142 SUPERFAMILY SSF52402 2 142 1.34E-29 T 06-07-2017 AM402_RS11065 a7ab8fc6bcf1e56f95fccf0ab37e7d26 142 Pfam PF00582 Universal stress protein family 1 142 1.8E-29 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS11065 a7ab8fc6bcf1e56f95fccf0ab37e7d26 142 Gene3D G3DSA:3.40.50.620 2 142 1.3E-35 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS11065 a7ab8fc6bcf1e56f95fccf0ab37e7d26 142 PRINTS PR01438 Universal stress protein signature 103 115 1.2E-12 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS11065 a7ab8fc6bcf1e56f95fccf0ab37e7d26 142 PRINTS PR01438 Universal stress protein signature 120 142 1.2E-12 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS11065 a7ab8fc6bcf1e56f95fccf0ab37e7d26 142 PRINTS PR01438 Universal stress protein signature 2 20 1.2E-12 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS05860 0a8e0b51db5e5a943ba1395514064309 232 Gene3D G3DSA:3.50.30.40 16 198 5.1E-27 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM402_RS05860 0a8e0b51db5e5a943ba1395514064309 232 SUPERFAMILY SSF89562 16 200 6.67E-23 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM402_RS05860 0a8e0b51db5e5a943ba1395514064309 232 Pfam PF03737 Demethylmenaquinone methyltransferase 22 189 8.8E-22 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM402_RS03575 6ef66c23152eca4a3a8680deff4951e6 186 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 46.309 T 06-07-2017 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM402_RS03575 6ef66c23152eca4a3a8680deff4951e6 186 Gene3D G3DSA:3.40.50.360 5 176 1.6E-43 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS03575 6ef66c23152eca4a3a8680deff4951e6 186 SUPERFAMILY SSF52218 6 176 4.71E-42 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS03575 6ef66c23152eca4a3a8680deff4951e6 186 Pfam PF02525 Flavodoxin-like fold 6 172 4.9E-40 T 06-07-2017 IPR003680 Flavodoxin-like fold AM402_RS09250 1a654894e593a7ac1f5d28cab1950a24 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 3.0E-49 T 06-07-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09250 1a654894e593a7ac1f5d28cab1950a24 376 Gene3D G3DSA:1.10.620.20 3 340 2.1E-127 T 06-07-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 AM402_RS09250 1a654894e593a7ac1f5d28cab1950a24 376 SUPERFAMILY SSF47240 3 340 1.38E-115 T 06-07-2017 IPR009078 Ferritin-like superfamily AM402_RS09250 1a654894e593a7ac1f5d28cab1950a24 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 06-07-2017 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS09340 fbacd7da8e16393b6dbda858f1b90fac 495 Pfam PF11863 Protein of unknown function (DUF3383) 6 494 1.0E-121 T 06-07-2017 IPR021808 Protein of unknown function DUF3383 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 Gene3D G3DSA:3.30.250.10 272 328 4.6E-28 T 06-07-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 Pfam PF00154 recA bacterial DNA recombination protein 9 270 2.2E-143 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 ProSitePatterns PS00321 recA signature. 215 223 - T 06-07-2017 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 Gene3D G3DSA:3.40.50.300 28 269 5.4E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 SUPERFAMILY SSF52540 5 269 1.24E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 Hamap MF_00268 Protein RecA [recA]. 7 331 51.098 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 8.3E-173 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 SMART SM00382 59 230 2.9E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 PRINTS PR00142 RecA protein signature 129 158 1.7E-84 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 PRINTS PR00142 RecA protein signature 299 316 1.7E-84 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 PRINTS PR00142 RecA protein signature 245 274 1.7E-84 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 PRINTS PR00142 RecA protein signature 95 124 1.7E-84 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 PRINTS PR00142 RecA protein signature 212 240 1.7E-84 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 PRINTS PR00142 RecA protein signature 167 196 1.7E-84 T 06-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM402_RS17145 3c59f325b022faf1efc2779d91ebc73b 355 SUPERFAMILY SSF54752 271 327 1.02E-21 T 06-07-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal AM402_RS19615 2ae1cde9e1512667b25a08e118d4bc7a 216 Pfam PF01965 DJ-1/PfpI family 13 189 2.5E-8 T 06-07-2017 IPR002818 DJ-1/PfpI AM402_RS19615 2ae1cde9e1512667b25a08e118d4bc7a 216 SUPERFAMILY SSF52317 1 216 5.04E-59 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS19615 2ae1cde9e1512667b25a08e118d4bc7a 216 PIRSF PIRSF006320 1 216 9.0E-98 T 06-07-2017 IPR026041 Glyoxalase ElbB AM402_RS19615 2ae1cde9e1512667b25a08e118d4bc7a 216 Gene3D G3DSA:3.40.50.880 1 215 5.0E-97 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS14245 a5561b2bebcfafc20ec2b4e0cdfd9e5e 209 Pfam PF00849 RNA pseudouridylate synthase 32 177 2.0E-16 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS14245 a5561b2bebcfafc20ec2b4e0cdfd9e5e 209 SUPERFAMILY SSF55120 32 207 9.92E-44 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS14245 a5561b2bebcfafc20ec2b4e0cdfd9e5e 209 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 67 81 - T 06-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM402_RS14245 a5561b2bebcfafc20ec2b4e0cdfd9e5e 209 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 36 207 8.5E-56 T 06-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM402_RS06075 caa1f7ae6780600da1ef237f43d783a8 177 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 41 103 1.1E-7 T 06-07-2017 IPR025159 Transcriptional regulator, AbiEi antitoxin AM402_RS12335 afadac8e89252c6ccb582deb3144dd4b 389 Pfam PF00155 Aminotransferase class I and II 28 370 5.0E-35 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS12335 afadac8e89252c6ccb582deb3144dd4b 389 SUPERFAMILY SSF53383 6 381 3.3E-77 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS12335 afadac8e89252c6ccb582deb3144dd4b 389 Gene3D G3DSA:3.90.1150.10 251 381 2.7E-32 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS12335 afadac8e89252c6ccb582deb3144dd4b 389 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 380 2.0E-104 T 06-07-2017 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AM402_RS12335 afadac8e89252c6ccb582deb3144dd4b 389 Gene3D G3DSA:3.40.640.10 40 250 2.3E-42 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS03495 cbb376b01d78c3975a6b4b639589c2d8 207 Pfam PF01926 50S ribosome-binding GTPase 28 146 8.3E-20 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS03495 cbb376b01d78c3975a6b4b639589c2d8 207 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.047 T 06-07-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM402_RS03495 cbb376b01d78c3975a6b4b639589c2d8 207 Gene3D G3DSA:3.40.50.300 6 197 1.6E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03495 cbb376b01d78c3975a6b4b639589c2d8 207 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 193 2.7E-76 T 06-07-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM402_RS03495 cbb376b01d78c3975a6b4b639589c2d8 207 SUPERFAMILY SSF52540 17 197 3.97E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16810 925d7edece006663d04b3436d4225cc2 344 Gene3D G3DSA:3.40.50.300 1 139 2.2E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16810 925d7edece006663d04b3436d4225cc2 344 Gene3D G3DSA:1.20.272.20 224 341 1.6E-48 T 06-07-2017 AM402_RS16810 925d7edece006663d04b3436d4225cc2 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 2.3E-46 T 06-07-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AM402_RS16810 925d7edece006663d04b3436d4225cc2 344 Gene3D G3DSA:1.10.8.60 146 223 4.6E-35 T 06-07-2017 AM402_RS16810 925d7edece006663d04b3436d4225cc2 344 SUPERFAMILY SSF52540 1 210 1.24E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16810 925d7edece006663d04b3436d4225cc2 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 19 332 3.2E-98 T 06-07-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AM402_RS16810 925d7edece006663d04b3436d4225cc2 344 SUPERFAMILY SSF48019 212 335 4.25E-33 T 06-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM402_RS16810 925d7edece006663d04b3436d4225cc2 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 215 337 4.8E-53 T 06-07-2017 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 06-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 SUPERFAMILY SSF56645 1 227 5.24E-50 T 06-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 6.6E-21 T 06-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 Gene3D G3DSA:1.10.540.10 1 109 1.3E-18 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 8.9E-46 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 Gene3D G3DSA:2.40.110.10 123 217 2.4E-22 T 06-07-2017 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 Hamap MF_01052 Crotonobetainyl-CoA dehydrogenase [caiA]. 1 380 88.032 T 06-07-2017 IPR023450 Crotonobetainyl-CoA dehydrogenase CaiA GO:0009437|GO:0016627|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 SUPERFAMILY SSF47203 226 379 2.26E-46 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 06-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 108 1.0E-14 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AM402_RS04355 a3c52f1a031f550815722607964f2f9e 380 Gene3D G3DSA:1.20.140.10 218 380 6.7E-52 T 06-07-2017 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 2.0E-21 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 2.0E-21 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.0E-21 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 2.0E-21 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 16 444 2.0E-104 T 06-07-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 6.7E-7 T 06-07-2017 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 6.7E-7 T 06-07-2017 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.7E-7 T 06-07-2017 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 6.7E-7 T 06-07-2017 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 Gene3D G3DSA:1.10.40.30 373 444 1.7E-27 T 06-07-2017 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 SUPERFAMILY SSF48557 9 447 5.03E-110 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 Pfam PF00206 Lyase 17 296 1.7E-40 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 SMART SM00998 365 444 9.8E-30 T 06-07-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 Gene3D G3DSA:1.10.275.10 5 104 1.1E-30 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 Pfam PF10397 Adenylosuccinate lyase C-terminus 366 443 8.1E-21 T 06-07-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS15840 a818046ac7be31aa93d29b573b459437 455 Gene3D G3DSA:1.20.200.10 105 372 5.4E-78 T 06-07-2017 AM402_RS12755 860b68c5adcb0a4e738243eb0df2a42b 316 SUPERFAMILY SSF52402 4 152 7.62E-24 T 06-07-2017 AM402_RS12755 860b68c5adcb0a4e738243eb0df2a42b 316 SUPERFAMILY SSF52402 153 307 1.51E-22 T 06-07-2017 AM402_RS12755 860b68c5adcb0a4e738243eb0df2a42b 316 Gene3D G3DSA:3.40.50.620 1 142 9.4E-21 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS12755 860b68c5adcb0a4e738243eb0df2a42b 316 Pfam PF00582 Universal stress protein family 4 146 2.2E-15 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS12755 860b68c5adcb0a4e738243eb0df2a42b 316 Pfam PF00582 Universal stress protein family 228 301 2.1E-12 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS12755 860b68c5adcb0a4e738243eb0df2a42b 316 Gene3D G3DSA:3.40.50.620 143 304 1.6E-25 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 Gene3D G3DSA:3.80.30.10 136 311 8.4E-53 T 06-07-2017 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 SUPERFAMILY SSF102114 113 287 3.34E-13 T 06-07-2017 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 Hamap MF_02059 Choline trimethylamine-lyase activating enzyme [cutD]. 4 316 54.952 T 06-07-2017 IPR030905 Choline TMA-lyase-activating enzyme AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 ProSitePatterns PS01087 Radical activating enzymes signature. 22 43 - T 06-07-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 11 307 2.2E-113 T 06-07-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 PIRSF PIRSF000371 1 312 6.4E-98 T 06-07-2017 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 Gene3D G3DSA:3.30.70.20 68 109 2.1E-9 T 06-07-2017 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 TIGRFAM TIGR04395 cutC_activ_rSAM: choline TMA-lyase-activating enzyme 7 316 3.8E-121 T 06-07-2017 IPR030905 Choline TMA-lyase-activating enzyme AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 Gene3D G3DSA:3.30.70.20 34 67 2.0E-5 T 06-07-2017 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 SUPERFAMILY SSF54862 9 159 2.89E-22 T 06-07-2017 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 Pfam PF13353 4Fe-4S single cluster domain 21 200 1.6E-9 T 06-07-2017 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 Pfam PF04055 Radical SAM superfamily 29 242 1.8E-22 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS04055 9caeb0bcb9ede2427625a6ac69cc91ed 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS12895 5918264ffa51c02bf5f1cae092cd2909 307 Gene3D G3DSA:3.40.50.1820 24 171 1.2E-18 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12895 5918264ffa51c02bf5f1cae092cd2909 307 Gene3D G3DSA:3.40.50.1820 227 304 1.2E-18 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12895 5918264ffa51c02bf5f1cae092cd2909 307 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 133 275 1.2E-5 T 06-07-2017 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal Reactome: R-HSA-75105 AM402_RS12895 5918264ffa51c02bf5f1cae092cd2909 307 SUPERFAMILY SSF53474 26 287 5.61E-22 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12660 6ea593ecba45cde067c11dba2ec2341b 345 Pfam PF01112 Asparaginase 32 343 4.4E-122 T 06-07-2017 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AM402_RS12660 6ea593ecba45cde067c11dba2ec2341b 345 SUPERFAMILY SSF56235 209 343 1.03E-98 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS12660 6ea593ecba45cde067c11dba2ec2341b 345 SUPERFAMILY SSF56235 30 181 1.03E-98 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS12445 a004fca43ab17239dcd247a1c4d0af21 198 SUPERFAMILY SSF46689 10 85 4.39E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12445 a004fca43ab17239dcd247a1c4d0af21 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 9.8E-17 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS12445 a004fca43ab17239dcd247a1c4d0af21 198 Gene3D G3DSA:1.10.357.10 10 177 1.6E-28 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS12445 a004fca43ab17239dcd247a1c4d0af21 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.8E-10 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS12445 a004fca43ab17239dcd247a1c4d0af21 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.8E-10 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 SUPERFAMILY SSF56601 13 292 5.36E-79 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 SMART SM00936 292 383 6.2E-32 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 Gene3D G3DSA:3.40.710.10 37 290 2.5E-96 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 8.6E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 8.6E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 8.6E-17 T 06-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 6.4E-25 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 Gene3D G3DSA:2.60.410.10 292 383 3.9E-32 T 06-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 271 6.7E-99 T 06-07-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM402_RS16850 12dc9535789c9120b81cffb3bc6d4da8 403 SUPERFAMILY SSF69189 292 385 6.08E-25 T 06-07-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM402_RS21270 c64d4e44bd86952b2c838f55c3723d30 81 Gene3D G3DSA:1.10.260.40 1 71 9.6E-20 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS21270 c64d4e44bd86952b2c838f55c3723d30 81 SUPERFAMILY SSF47413 2 71 7.51E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS21270 c64d4e44bd86952b2c838f55c3723d30 81 Pfam PF12844 Helix-turn-helix domain 4 64 4.7E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS21270 c64d4e44bd86952b2c838f55c3723d30 81 SMART SM00530 5 64 3.0E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS08835 823ac89a3edb18795cf200670c376871 192 Gene3D G3DSA:3.30.70.20 123 160 4.4E-31 T 06-07-2017 AM402_RS08835 823ac89a3edb18795cf200670c376871 192 Gene3D G3DSA:3.30.70.20 7 71 4.4E-31 T 06-07-2017 AM402_RS08835 823ac89a3edb18795cf200670c376871 192 SUPERFAMILY SSF54862 6 157 5.34E-57 T 06-07-2017 AM402_RS08835 823ac89a3edb18795cf200670c376871 192 Pfam PF12800 4Fe-4S binding domain 15 28 0.0034 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS08835 823ac89a3edb18795cf200670c376871 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 96 107 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS08835 823ac89a3edb18795cf200670c376871 192 Pfam PF13247 4Fe-4S dicluster domain 57 152 4.0E-23 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS08835 823ac89a3edb18795cf200670c376871 192 Gene3D G3DSA:3.30.70.20 72 122 2.4E-24 T 06-07-2017 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 374 398 - T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 SUPERFAMILY SSF56235 25 542 4.82E-187 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 33 546 3.2E-179 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 Pfam PF01019 Gamma-glutamyltranspeptidase 48 549 7.1E-183 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 374 392 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 128 146 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 439 454 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 480 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 165 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 245 261 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 275 294 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 398 416 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS19075 a1306b62b5e855f8545cad49d376724f 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 55 80 8.4E-75 T 06-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 Pfam PF17092 Penicillin-binding protein OB-like domain 316 426 1.1E-30 T 06-07-2017 IPR031376 Penicillin-binding protein, OB-like domain AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 SUPERFAMILY SSF53955 43 257 6.19E-79 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 Gene3D G3DSA:1.10.3810.10 55 231 2.9E-73 T 06-07-2017 AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 Gene3D G3DSA:3.40.710.10 423 612 8.7E-129 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 Gene3D G3DSA:3.40.710.10 232 313 8.7E-129 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 Gene3D G3DSA:3.40.710.10 674 826 8.7E-129 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 SUPERFAMILY SSF56601 211 233 1.73E-113 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 SUPERFAMILY SSF56601 673 826 1.73E-113 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 SUPERFAMILY SSF56601 262 313 1.73E-113 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 SUPERFAMILY SSF56601 423 611 1.73E-113 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 Pfam PF00912 Transglycosylase 55 229 1.7E-63 T 06-07-2017 IPR001264 Glycosyl transferase, family 51 AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 779 1.7E-171 T 06-07-2017 AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 725 6.8E-24 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM402_RS02510 992ca7e55da6f987de5cb779b066b8ac 844 Gene3D G3DSA:2.40.50.140 347 422 3.1E-24 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS16065 4a8491056d9d5cf18204e1e6bd0a993c 352 Pfam PF00793 DAHP synthetase I family 40 338 1.3E-109 T 06-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM402_RS16065 4a8491056d9d5cf18204e1e6bd0a993c 352 Gene3D G3DSA:3.20.20.70 9 350 2.3E-161 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS16065 4a8491056d9d5cf18204e1e6bd0a993c 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 3.0E-176 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM402_RS16065 4a8491056d9d5cf18204e1e6bd0a993c 352 PIRSF PIRSF001361 1 352 1.1E-165 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM402_RS16065 4a8491056d9d5cf18204e1e6bd0a993c 352 SUPERFAMILY SSF51569 7 348 6.49E-138 T 06-07-2017 AM402_RS00080 50bdd283c8dfa618437595f2b62d8591 415 SUPERFAMILY SSF103473 3 406 3.27E-44 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS00080 50bdd283c8dfa618437595f2b62d8591 415 Gene3D G3DSA:1.20.1250.20 21 193 5.1E-20 T 06-07-2017 AM402_RS00080 50bdd283c8dfa618437595f2b62d8591 415 Pfam PF07690 Major Facilitator Superfamily 28 359 1.7E-27 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS00080 50bdd283c8dfa618437595f2b62d8591 415 Gene3D G3DSA:1.20.1250.20 208 403 1.0E-14 T 06-07-2017 AM402_RS06230 163633f5c6049abc8b46572c3a776f08 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.237 T 06-07-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AM402_RS06230 163633f5c6049abc8b46572c3a776f08 274 SUPERFAMILY SSF51161 2 256 3.05E-77 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS06230 163633f5c6049abc8b46572c3a776f08 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 3.4E-13 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS06230 163633f5c6049abc8b46572c3a776f08 274 Gene3D G3DSA:1.10.166.10 1 69 1.9E-32 T 06-07-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AM402_RS06230 163633f5c6049abc8b46572c3a776f08 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 1.5E-159 T 06-07-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AM402_RS06230 163633f5c6049abc8b46572c3a776f08 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 5.5E-26 T 06-07-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AM402_RS06230 163633f5c6049abc8b46572c3a776f08 274 Gene3D G3DSA:2.160.10.10 89 255 3.6E-64 T 06-07-2017 AM402_RS06230 163633f5c6049abc8b46572c3a776f08 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 SUPERFAMILY SSF49354 24 153 4.97E-37 T 06-07-2017 IPR008962 PapD-like AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 Gene3D G3DSA:2.60.40.1070 156 247 6.9E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 PRINTS PR00969 Pili chaperone signature 174 189 9.0E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 PRINTS PR00969 Pili chaperone signature 135 150 9.0E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 PRINTS PR00969 Pili chaperone signature 109 126 9.0E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 PRINTS PR00969 Pili chaperone signature 80 101 9.0E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 PRINTS PR00969 Pili chaperone signature 30 39 9.0E-29 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 153 2.9E-40 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 SUPERFAMILY SSF49584 154 248 4.19E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 179 242 1.7E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS07995 c12a89109b208e49b91882b19209d6af 252 Gene3D G3DSA:2.60.40.360 29 153 2.1E-39 T 06-07-2017 IPR008962 PapD-like AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF55008 2 70 2.62E-17 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.50.50.60 100 240 8.5E-31 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 1.7E-92 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 1.7E-92 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 1.7E-92 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 1.7E-92 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 1.7E-92 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 1.7E-92 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 1.7E-92 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 1.7E-92 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF51905 98 427 5.47E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF55424 436 559 7.22E-33 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.30.390.30 432 549 2.9E-38 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 9.9E-187 T 06-07-2017 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 1.4E-28 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.50.50.60 241 427 5.9E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 133 143 - T 06-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 Pfam PF00403 Heavy-metal-associated domain 3 43 8.4E-10 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 PIRSF PIRSF000350 1 561 1.5E-263 T 06-07-2017 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 1.9E-64 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21920 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.30.70.100 2 68 2.3E-21 T 06-07-2017 AM402_RS16555 1c486ea583c38da462c7c1166ee702d4 461 Gene3D G3DSA:1.10.860.10 5 107 3.5E-31 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM402_RS16555 1c486ea583c38da462c7c1166ee702d4 461 SUPERFAMILY SSF52540 184 429 4.86E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16555 1c486ea583c38da462c7c1166ee702d4 461 Pfam PF03796 DnaB-like helicase C terminal domain 185 429 2.6E-69 T 06-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM402_RS16555 1c486ea583c38da462c7c1166ee702d4 461 Pfam PF00772 DnaB-like helicase N terminal domain 4 107 1.5E-30 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS16555 1c486ea583c38da462c7c1166ee702d4 461 Gene3D G3DSA:3.40.50.300 178 431 5.4E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16555 1c486ea583c38da462c7c1166ee702d4 461 SUPERFAMILY SSF48024 1 115 7.59E-31 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 Pfam PF01546 Peptidase family M20/M25/M40 139 401 3.2E-14 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 Pfam PF07687 Peptidase dimerisation domain 205 302 1.3E-12 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 Gene3D G3DSA:3.30.70.360 209 319 1.8E-44 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 Gene3D G3DSA:3.40.630.10 322 407 1.1E-113 T 06-07-2017 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 Gene3D G3DSA:3.40.630.10 1 208 1.1E-113 T 06-07-2017 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 PIRSF PIRSF037215 1 408 1.9E-178 T 06-07-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.551 T 06-07-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 SUPERFAMILY SSF53187 322 403 2.65E-78 T 06-07-2017 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 SUPERFAMILY SSF53187 1 209 2.65E-78 T 06-07-2017 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 407 9.2E-153 T 06-07-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM402_RS14290 6668967017f095f85e5d8f599fe3b1f5 414 SUPERFAMILY SSF55031 208 320 1.62E-42 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS11645 2c04370f05534d2d22bffef00082e033 271 Gene3D G3DSA:1.10.260.40 7 69 6.9E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11645 2c04370f05534d2d22bffef00082e033 271 Pfam PF01381 Helix-turn-helix 12 65 1.0E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS11645 2c04370f05534d2d22bffef00082e033 271 SUPERFAMILY SSF47413 4 69 8.19E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11645 2c04370f05534d2d22bffef00082e033 271 Gene3D G3DSA:2.10.109.10 117 211 7.6E-26 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS11645 2c04370f05534d2d22bffef00082e033 271 Pfam PF00717 Peptidase S24-like 124 191 1.1E-11 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS11645 2c04370f05534d2d22bffef00082e033 271 SMART SM00530 10 65 1.2E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS11645 2c04370f05534d2d22bffef00082e033 271 SUPERFAMILY SSF51306 117 210 6.8E-21 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SUPERFAMILY SSF55052 190 253 5.49E-18 T 06-07-2017 IPR015162 CheY binding AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SMART SM00073 3 100 5.7E-33 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 340 402 1.0E-17 T 06-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Gene3D G3DSA:2.30.30.40 587 608 1.5E-23 T 06-07-2017 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Gene3D G3DSA:2.30.30.40 675 718 1.5E-23 T 06-07-2017 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SUPERFAMILY SSF47226 3 124 4.84E-33 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Gene3D G3DSA:1.10.287.560 340 403 5.5E-23 T 06-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Pfam PF01627 Hpt domain 5 101 6.9E-20 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Gene3D G3DSA:3.30.70.400 189 255 1.0E-26 T 06-07-2017 IPR015162 CheY binding AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SMART SM00260 579 719 1.1E-38 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Gene3D G3DSA:3.30.565.10 404 586 2.0E-33 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SUPERFAMILY SSF47384 340 403 4.71E-15 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Gene3D G3DSA:2.40.50.180 612 674 4.7E-12 T 06-07-2017 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SUPERFAMILY SSF55874 405 585 2.23E-35 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SUPERFAMILY SSF50341 586 718 2.49E-30 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SMART SM00387 447 587 1.9E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 6.2E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 6.2E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 584 6.2E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 506 6.2E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 SMART SM01231 339 402 2.5E-22 T 06-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Pfam PF09078 CheY binding 191 252 1.2E-22 T 06-07-2017 IPR015162 CheY binding AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Gene3D G3DSA:1.20.120.160 2 134 4.2E-40 T 06-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Pfam PF01584 CheW-like domain 592 718 3.3E-25 T 06-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM402_RS09615 9007d40f8499c2944126f4d9e6cf2aa3 739 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 450 586 4.3E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS20440 d7f550044b4953687d865c59258adff6 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 8.4E-112 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 AM402_RS20440 d7f550044b4953687d865c59258adff6 306 SUPERFAMILY SSF53613 1 302 3.9E-81 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS20440 d7f550044b4953687d865c59258adff6 306 Pfam PF00294 pfkB family carbohydrate kinase 2 294 1.8E-61 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS20440 d7f550044b4953687d865c59258adff6 306 Gene3D G3DSA:3.40.1190.20 1 304 1.1E-90 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS20440 d7f550044b4953687d865c59258adff6 306 PRINTS PR00990 Ribokinase signature 32 51 2.6E-32 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS20440 d7f550044b4953687d865c59258adff6 306 PRINTS PR00990 Ribokinase signature 104 117 2.6E-32 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS20440 d7f550044b4953687d865c59258adff6 306 PRINTS PR00990 Ribokinase signature 217 228 2.6E-32 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS20440 d7f550044b4953687d865c59258adff6 306 PRINTS PR00990 Ribokinase signature 173 188 2.6E-32 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS20440 d7f550044b4953687d865c59258adff6 306 PRINTS PR00990 Ribokinase signature 5 26 2.6E-32 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS20440 d7f550044b4953687d865c59258adff6 306 Hamap MF_01987 Ribokinase [rbsK]. 1 301 25.925 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 AM402_RS01260 db73df1ca598cb0daa12e1e4c4bfe699 172 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 45.004 T 06-07-2017 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AM402_RS01260 db73df1ca598cb0daa12e1e4c4bfe699 172 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 5.2E-60 T 06-07-2017 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AM402_RS01260 db73df1ca598cb0daa12e1e4c4bfe699 172 SUPERFAMILY SSF89562 2 158 1.31E-41 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM402_RS01260 db73df1ca598cb0daa12e1e4c4bfe699 172 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 5.6E-35 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM402_RS01260 db73df1ca598cb0daa12e1e4c4bfe699 172 Gene3D G3DSA:3.50.30.40 1 157 6.1E-43 T 06-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM402_RS01260 db73df1ca598cb0daa12e1e4c4bfe699 172 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 1.3E-84 T 06-07-2017 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AM402_RS04390 b48a016402335945574e31f95eb262e2 545 Gene3D G3DSA:3.40.50.980 7 191 2.9E-31 T 06-07-2017 AM402_RS04390 b48a016402335945574e31f95eb262e2 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 520 2.6E-9 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain AM402_RS04390 b48a016402335945574e31f95eb262e2 545 Pfam PF00501 AMP-binding enzyme 14 436 2.5E-96 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM402_RS04390 b48a016402335945574e31f95eb262e2 545 Gene3D G3DSA:3.30.300.30 431 527 1.6E-22 T 06-07-2017 AM402_RS04390 b48a016402335945574e31f95eb262e2 545 Gene3D G3DSA:3.40.50.980 192 354 7.1E-48 T 06-07-2017 AM402_RS04390 b48a016402335945574e31f95eb262e2 545 SUPERFAMILY SSF56801 6 527 3.92E-134 T 06-07-2017 AM402_RS04390 b48a016402335945574e31f95eb262e2 545 Gene3D G3DSA:2.30.38.10 355 426 7.9E-26 T 06-07-2017 AM402_RS05920 a5cd49e75284f85cd5a9dec21747e497 261 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 238 3.2E-28 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM402_RS05920 a5cd49e75284f85cd5a9dec21747e497 261 Gene3D G3DSA:3.40.830.10 3 261 1.9E-92 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM402_RS05920 a5cd49e75284f85cd5a9dec21747e497 261 SUPERFAMILY SSF53213 6 261 3.66E-86 T 06-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM402_RS05920 a5cd49e75284f85cd5a9dec21747e497 261 PIRSF PIRSF006157 1 261 3.5E-89 T 06-07-2017 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 AM402_RS12155 79ec170727b681c426981111ef867af8 212 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.0E-7 T 06-07-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 SUPERFAMILY SSF48150 3 208 5.97E-73 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 Gene3D G3DSA:1.10.1670.10 123 208 4.3E-36 T 06-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.8E-19 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 06-07-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 06-07-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 SMART SM00525 186 206 1.1E-4 T 06-07-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.3E-89 T 06-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM402_RS12155 79ec170727b681c426981111ef867af8 212 SMART SM00478 38 185 2.6E-53 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 PIRSF PIRSF001435 1 211 2.3E-51 T 06-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM402_RS12155 79ec170727b681c426981111ef867af8 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.206 T 06-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM402_RS12155 79ec170727b681c426981111ef867af8 212 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 06-07-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM402_RS12155 79ec170727b681c426981111ef867af8 212 Gene3D G3DSA:1.10.340.30 23 122 2.2E-33 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM402_RS19650 ef36bc8d4c79894085be1ff314243d9a 169 SUPERFAMILY SSF101738 4 112 1.15E-43 T 06-07-2017 IPR007481 Stringent starvation protein B AM402_RS19650 ef36bc8d4c79894085be1ff314243d9a 169 Pfam PF04386 Stringent starvation protein B 9 169 3.1E-41 T 06-07-2017 IPR007481 Stringent starvation protein B AM402_RS19650 ef36bc8d4c79894085be1ff314243d9a 169 Gene3D G3DSA:2.30.30.220 4 111 1.3E-46 T 06-07-2017 IPR007481 Stringent starvation protein B AM402_RS19650 ef36bc8d4c79894085be1ff314243d9a 169 PIRSF PIRSF005276 3 169 2.1E-53 T 06-07-2017 IPR007481 Stringent starvation protein B AM402_RS01960 2322c2ee0fb772be7ad1fbd4f539295b 450 Gene3D G3DSA:1.25.40.10 48 166 6.5E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS01960 2322c2ee0fb772be7ad1fbd4f539295b 450 SUPERFAMILY SSF48452 74 173 1.07E-7 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS01960 2322c2ee0fb772be7ad1fbd4f539295b 450 Pfam PF04575 Protein of unknown function (DUF560) 165 450 5.1E-24 T 06-07-2017 IPR007655 Protein of unknown function DUF560 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 PIRSF PIRSF004776 3 414 9.2E-202 T 06-07-2017 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 SUPERFAMILY SSF52374 64 231 8.85E-21 T 06-07-2017 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 SUPERFAMILY SSF47413 6 62 8.13E-8 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 SUPERFAMILY SSF52540 232 386 1.49E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 Pfam PF13521 AAA domain 234 394 4.2E-33 T 06-07-2017 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 6.0E-19 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 Gene3D G3DSA:3.40.50.300 231 400 8.6E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 Pfam PF01381 Helix-turn-helix 7 57 3.3E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 Gene3D G3DSA:3.40.50.620 64 230 6.3E-52 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 SMART SM00530 6 62 5.5E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 2.7E-153 T 06-07-2017 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 AM402_RS05145 db42d8068f1c46e1ca7705e72d012755 414 Gene3D G3DSA:1.10.260.40 5 58 2.9E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 374 385 - T 06-07-2017 IPR020845 AMP-binding, conserved site AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 SUPERFAMILY SSF56801 209 716 2.62E-91 T 06-07-2017 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 Pfam PF13193 AMP-binding enzyme C-terminal domain 645 704 2.5E-5 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 Gene3D G3DSA:2.30.38.10 535 613 5.4E-12 T 06-07-2017 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 Gene3D G3DSA:3.40.50.980 234 380 1.7E-16 T 06-07-2017 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 Pfam PF00501 AMP-binding enzyme 237 623 1.4E-61 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 Gene3D G3DSA:3.40.1130.10 5 203 3.2E-9 T 06-07-2017 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 SMART SM00563 32 142 5.2E-23 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 Gene3D G3DSA:3.30.300.30 621 717 1.9E-10 T 06-07-2017 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 Gene3D G3DSA:3.40.50.980 381 531 1.0E-37 T 06-07-2017 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 Pfam PF01553 Acyltransferase 17 139 1.5E-15 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM402_RS17160 baad5c384a0191bc4906bd61cc933896 719 SUPERFAMILY SSF69593 6 206 1.05E-22 T 06-07-2017 AM402_RS18435 9ef317b09ed2b99eb1e1be31ee56b788 235 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 1.0E-109 T 06-07-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS18435 9ef317b09ed2b99eb1e1be31ee56b788 235 SUPERFAMILY SSF53167 1 229 1.17E-74 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS18435 9ef317b09ed2b99eb1e1be31ee56b788 235 Pfam PF01048 Phosphorylase superfamily 2 226 6.8E-50 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS18435 9ef317b09ed2b99eb1e1be31ee56b788 235 Gene3D G3DSA:3.40.50.1580 1 232 7.6E-78 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS18435 9ef317b09ed2b99eb1e1be31ee56b788 235 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.039 T 06-07-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AM402_RS20025 965764406d2c12baaa89a9bae0367a36 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 2.8E-10 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS20025 965764406d2c12baaa89a9bae0367a36 402 Pfam PF01385 Probable transposase 163 275 1.6E-29 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS20025 965764406d2c12baaa89a9bae0367a36 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 2.7E-23 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS20025 965764406d2c12baaa89a9bae0367a36 402 Pfam PF12323 Helix-turn-helix domain 1 48 3.9E-15 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS17570 49da4f1104d4bcbc48209463177b1917 952 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 49 943 0.0 T 06-07-2017 IPR022303 Conjugative transfer ATPase AM402_RS17570 49da4f1104d4bcbc48209463177b1917 952 Gene3D G3DSA:3.40.50.300 520 590 1.0E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17570 49da4f1104d4bcbc48209463177b1917 952 Gene3D G3DSA:3.40.50.300 732 858 1.0E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17570 49da4f1104d4bcbc48209463177b1917 952 SUPERFAMILY SSF52540 470 594 6.29E-29 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17570 49da4f1104d4bcbc48209463177b1917 952 SUPERFAMILY SSF52540 631 875 6.29E-29 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17570 49da4f1104d4bcbc48209463177b1917 952 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 60 327 4.5E-74 T 06-07-2017 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM402_RS15960 e824b19ceaf6d48039b7ca39d4e89704 387 Pfam PF00155 Aminotransferase class I and II 41 373 6.5E-54 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS15960 e824b19ceaf6d48039b7ca39d4e89704 387 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 234 243 - T 06-07-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM402_RS15960 e824b19ceaf6d48039b7ca39d4e89704 387 Gene3D G3DSA:3.90.1150.10 272 382 1.5E-29 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS15960 e824b19ceaf6d48039b7ca39d4e89704 387 Gene3D G3DSA:3.40.640.10 59 271 3.7E-81 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS15960 e824b19ceaf6d48039b7ca39d4e89704 387 SUPERFAMILY SSF53383 3 380 2.82E-105 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS15960 e824b19ceaf6d48039b7ca39d4e89704 387 ProSitePatterns PS00414 Profilin signature. 1 8 - T 06-07-2017 IPR027310 Profilin conserved site GO:0003779 Reactome: R-HSA-376176|Reactome: R-HSA-5663220 AM402_RS15960 e824b19ceaf6d48039b7ca39d4e89704 387 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 383 46.852 T 06-07-2017 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM402_RS15960 e824b19ceaf6d48039b7ca39d4e89704 387 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 9.5E-132 T 06-07-2017 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM402_RS13310 36ca08f092ab6d491497be3399f305df 339 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 251 334 4.9E-20 T 06-07-2017 IPR019491 Lipoate protein ligase, C-terminal AM402_RS13310 36ca08f092ab6d491497be3399f305df 339 SUPERFAMILY SSF82649 249 337 2.04E-24 T 06-07-2017 AM402_RS13310 36ca08f092ab6d491497be3399f305df 339 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 159 1.7E-7 T 06-07-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM402_RS13310 36ca08f092ab6d491497be3399f305df 339 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 5 330 5.5E-125 T 06-07-2017 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 Reactome: R-HSA-389661 AM402_RS13310 36ca08f092ab6d491497be3399f305df 339 Gene3D G3DSA:3.90.1550.10 4 248 6.5E-85 T 06-07-2017 AM402_RS13310 36ca08f092ab6d491497be3399f305df 339 Gene3D G3DSA:3.30.390.50 250 335 5.3E-15 T 06-07-2017 AM402_RS13310 36ca08f092ab6d491497be3399f305df 339 SUPERFAMILY SSF55681 4 248 7.29E-82 T 06-07-2017 AM402_RS13310 36ca08f092ab6d491497be3399f305df 339 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 2 339 57.108 T 06-07-2017 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 AM402_RS03945 658d861b30a373b909b80731672c09c7 371 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS03945 658d861b30a373b909b80731672c09c7 371 SUPERFAMILY SSF50331 243 364 1.02E-6 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AM402_RS03945 658d861b30a373b909b80731672c09c7 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 41 365 1.3E-159 T 06-07-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM402_RS03945 658d861b30a373b909b80731672c09c7 371 SUPERFAMILY SSF52540 10 250 1.27E-87 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03945 658d861b30a373b909b80731672c09c7 371 Pfam PF08402 TOBE domain 285 365 1.6E-7 T 06-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM402_RS03945 658d861b30a373b909b80731672c09c7 371 SMART SM00382 35 218 1.3E-19 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS03945 658d861b30a373b909b80731672c09c7 371 Gene3D G3DSA:3.40.50.300 9 241 9.1E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03945 658d861b30a373b909b80731672c09c7 371 Pfam PF00005 ABC transporter 28 167 1.3E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS10360 dc3f37c98482b845b3c6d2672c522b86 160 Pfam PF06992 Replication protein P 51 135 3.9E-10 T 06-07-2017 IPR009731 Replication P GO:0006270 AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 Gene3D G3DSA:1.10.10.10 120 209 1.2E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 8.9E-20 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 SUPERFAMILY SSF52172 11 127 4.55E-8 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 Pfam PF00072 Response regulator receiver domain 19 114 9.3E-6 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 5.5E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 5.5E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 5.5E-11 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 SUPERFAMILY SSF46894 137 208 2.14E-19 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 SMART SM00421 144 201 2.3E-19 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10665 b8289408e43b6c891f20cb72ce9a9be7 219 Gene3D G3DSA:3.40.50.2300 5 119 3.6E-10 T 06-07-2017 AM402_RS14195 1e5c21d3e7c47569c902b3782cd5354c 70 Gene3D G3DSA:1.10.260.40 4 63 5.2E-19 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14195 1e5c21d3e7c47569c902b3782cd5354c 70 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 6 63 2.2E-19 T 06-07-2017 IPR031856 Putative bacterial antitoxin YdaS AM402_RS14195 1e5c21d3e7c47569c902b3782cd5354c 70 SUPERFAMILY SSF47413 6 63 1.34E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS21495 6b554abd5198608a4647e750063f7fa1 487 SMART SM00382 241 374 3.2E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS21495 6b554abd5198608a4647e750063f7fa1 487 Gene3D G3DSA:1.10.8.60 381 446 3.1E-8 T 06-07-2017 AM402_RS21495 6b554abd5198608a4647e750063f7fa1 487 Gene3D G3DSA:3.40.50.300 223 380 2.9E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21495 6b554abd5198608a4647e750063f7fa1 487 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 245 371 7.4E-27 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS21495 6b554abd5198608a4647e750063f7fa1 487 SUPERFAMILY SSF52540 214 440 7.06E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 SUPERFAMILY SSF50249 13 154 7.35E-46 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 PIRSF PIRSF039101 1 504 1.1E-201 T 06-07-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 504 45.459 T 06-07-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 Gene3D G3DSA:2.40.50.140 15 153 1.7E-48 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 502 3.3E-231 T 06-07-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 Gene3D G3DSA:3.30.930.10 156 499 1.9E-124 T 06-07-2017 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 2.3E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 2.3E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 2.3E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 2.3E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 385 401 2.3E-39 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 500 1.3E-84 T 06-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 Pfam PF01336 OB-fold nucleic acid binding domain 67 145 3.6E-14 T 06-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM402_RS07750 f30bce3b7033b8737da35939a1fa385d 504 SUPERFAMILY SSF55681 161 501 4.79E-125 T 06-07-2017 AM402_RS00120 53287445cc2e0c791d6168e560d16c0e 318 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.2E-22 T 06-07-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AM402_RS00120 53287445cc2e0c791d6168e560d16c0e 318 SUPERFAMILY SSF55120 9 248 1.38E-82 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS00120 53287445cc2e0c791d6168e560d16c0e 318 Gene3D G3DSA:2.30.130.10 249 311 3.0E-20 T 06-07-2017 IPR015947 PUA-like domain AM402_RS00120 53287445cc2e0c791d6168e560d16c0e 318 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.631 T 06-07-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS00120 53287445cc2e0c791d6168e560d16c0e 318 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 5.0E-59 T 06-07-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AM402_RS00120 53287445cc2e0c791d6168e560d16c0e 318 SUPERFAMILY SSF88697 250 309 4.72E-11 T 06-07-2017 IPR015947 PUA-like domain AM402_RS00120 53287445cc2e0c791d6168e560d16c0e 318 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.6E-88 T 06-07-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS00120 53287445cc2e0c791d6168e560d16c0e 318 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 3.6E-16 T 06-07-2017 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS07695 2c07966a9243f37894398d876657f22e 958 SUPERFAMILY SSF53383 477 888 2.48E-99 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS07695 2c07966a9243f37894398d876657f22e 958 SUPERFAMILY SSF53383 930 952 2.48E-99 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS07695 2c07966a9243f37894398d876657f22e 958 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 951 0.0 T 06-07-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM402_RS07695 2c07966a9243f37894398d876657f22e 958 Gene3D G3DSA:3.40.640.10 94 305 4.6E-12 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS07695 2c07966a9243f37894398d876657f22e 958 Gene3D G3DSA:3.40.640.10 504 754 1.5E-42 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS07695 2c07966a9243f37894398d876657f22e 958 Pfam PF02347 Glycine cleavage system P-protein 451 739 1.8E-8 T 06-07-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM402_RS07695 2c07966a9243f37894398d876657f22e 958 Pfam PF02347 Glycine cleavage system P-protein 16 439 5.5E-183 T 06-07-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM402_RS07695 2c07966a9243f37894398d876657f22e 958 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 957 25.038 T 06-07-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM402_RS07695 2c07966a9243f37894398d876657f22e 958 SUPERFAMILY SSF53383 17 440 3.64E-98 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 Gene3D G3DSA:3.40.50.1360 79 217 2.8E-16 T 06-07-2017 AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 SMART SM01134 74 235 3.5E-69 T 06-07-2017 AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 SMART SM00420 7 59 1.3E-16 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 Gene3D G3DSA:1.10.10.10 4 54 1.5E-9 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 2.5E-5 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 2.5E-5 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 SUPERFAMILY SSF46785 6 58 3.22E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 Pfam PF08220 DeoR-like helix-turn-helix domain 7 58 1.0E-16 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 Pfam PF00455 DeoR C terminal sensor domain 76 234 2.5E-53 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain AM402_RS07100 fdeab719dc683c73525ad7107818ae58 259 SUPERFAMILY SSF100950 76 235 4.02E-33 T 06-07-2017 AM402_RS12230 fda3c2f0fd080ccf1fd49a67bfd9f98f 421 Pfam PF07690 Major Facilitator Superfamily 47 291 3.9E-28 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS12230 fda3c2f0fd080ccf1fd49a67bfd9f98f 421 Gene3D G3DSA:1.20.1250.20 241 417 2.8E-12 T 06-07-2017 AM402_RS12230 fda3c2f0fd080ccf1fd49a67bfd9f98f 421 Gene3D G3DSA:1.20.1250.20 42 221 7.2E-35 T 06-07-2017 AM402_RS12230 fda3c2f0fd080ccf1fd49a67bfd9f98f 421 ProSitePatterns PS00216 Sugar transport proteins signature 1. 96 112 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM402_RS12230 fda3c2f0fd080ccf1fd49a67bfd9f98f 421 SUPERFAMILY SSF103473 25 416 1.57E-61 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS19755 238f1f11c7b258d5f28e527708eac9c0 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.0E-8 T 06-07-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM402_RS19755 238f1f11c7b258d5f28e527708eac9c0 241 Pfam PF00005 ABC transporter 21 166 4.4E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS19755 238f1f11c7b258d5f28e527708eac9c0 241 SUPERFAMILY SSF52540 3 236 3.31E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19755 238f1f11c7b258d5f28e527708eac9c0 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 3.1E-121 T 06-07-2017 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AM402_RS19755 238f1f11c7b258d5f28e527708eac9c0 241 SMART SM00382 28 231 4.9E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS19755 238f1f11c7b258d5f28e527708eac9c0 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS19755 238f1f11c7b258d5f28e527708eac9c0 241 Gene3D G3DSA:3.40.50.300 3 235 4.3E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17955 f7b19b503ba9c9405df96c9c5737818c 101 Pfam PF01381 Helix-turn-helix 12 62 3.7E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS17955 f7b19b503ba9c9405df96c9c5737818c 101 SUPERFAMILY SSF47413 1 70 9.29E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS17955 f7b19b503ba9c9405df96c9c5737818c 101 SMART SM00530 10 65 6.3E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS17955 f7b19b503ba9c9405df96c9c5737818c 101 Gene3D G3DSA:1.10.260.40 1 73 2.2E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 8.8E-155 T 06-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.803 T 06-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 Gene3D G3DSA:3.40.50.720 163 311 5.6E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 9.2E-50 T 06-07-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 8.4E-49 T 06-07-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 SUPERFAMILY SSF69742 1 158 1.57E-47 T 06-07-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 415 8.0E-23 T 06-07-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 06-07-2017 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 SUPERFAMILY SSF51735 162 315 1.24E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 SUPERFAMILY SSF69075 317 416 2.09E-26 T 06-07-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM402_RS13185 81bd457ceecaa013eb961c4e518f1bed 420 PIRSF PIRSF000445 1 420 3.0E-156 T 06-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM402_RS14990 60cc8e619ea8ff9465531501aeb7e322 94 ProSitePatterns PS00150 Acylphosphatase signature 1. 9 19 - T 06-07-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM402_RS14990 60cc8e619ea8ff9465531501aeb7e322 94 SUPERFAMILY SSF54975 3 90 4.8E-21 T 06-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM402_RS14990 60cc8e619ea8ff9465531501aeb7e322 94 Gene3D G3DSA:3.30.70.100 2 90 2.1E-20 T 06-07-2017 AM402_RS14990 60cc8e619ea8ff9465531501aeb7e322 94 Pfam PF00708 Acylphosphatase 3 90 6.1E-18 T 06-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 PRINTS PR00969 Pili chaperone signature 153 168 3.6E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 PRINTS PR00969 Pili chaperone signature 24 33 3.6E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 PRINTS PR00969 Pili chaperone signature 69 90 3.6E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 PRINTS PR00969 Pili chaperone signature 97 114 3.6E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 PRINTS PR00969 Pili chaperone signature 121 136 3.6E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 Gene3D G3DSA:2.60.40.1070 145 215 2.7E-16 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 SUPERFAMILY SSF49354 20 138 1.02E-35 T 06-07-2017 IPR008962 PapD-like AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 Gene3D G3DSA:2.60.40.360 23 139 3.3E-37 T 06-07-2017 IPR008962 PapD-like AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 158 214 2.5E-9 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 138 3.2E-33 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS00480 99d79e672d262ac8c55f0bd9a454f383 219 SUPERFAMILY SSF49584 144 216 1.57E-16 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS20080 4b06076ca5d8d5067db185cd019a6f1b 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 5.9E-6 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS20080 4b06076ca5d8d5067db185cd019a6f1b 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 5.9E-6 T 06-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM402_RS20080 4b06076ca5d8d5067db185cd019a6f1b 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.6E-132 T 06-07-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AM402_RS20080 4b06076ca5d8d5067db185cd019a6f1b 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.241 T 06-07-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AM402_RS20080 4b06076ca5d8d5067db185cd019a6f1b 325 SUPERFAMILY SSF55681 11 323 5.17E-84 T 06-07-2017 AM402_RS20080 4b06076ca5d8d5067db185cd019a6f1b 325 Gene3D G3DSA:3.30.930.10 12 321 4.6E-75 T 06-07-2017 AM402_RS20080 4b06076ca5d8d5067db185cd019a6f1b 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 322 1.9E-46 T 06-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS19150 c3a8e9025d26a339a1dfb10ed54862ae 410 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 2.5E-72 T 06-07-2017 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AM402_RS19150 c3a8e9025d26a339a1dfb10ed54862ae 410 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 380 3.0E-19 T 06-07-2017 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AM402_RS19150 c3a8e9025d26a339a1dfb10ed54862ae 410 Pfam PF00149 Calcineurin-like phosphoesterase 1 231 3.2E-14 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AM402_RS19150 c3a8e9025d26a339a1dfb10ed54862ae 410 Gene3D G3DSA:3.60.21.10 1 280 1.3E-67 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS19150 c3a8e9025d26a339a1dfb10ed54862ae 410 SUPERFAMILY SSF56300 1 141 1.27E-57 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS19150 c3a8e9025d26a339a1dfb10ed54862ae 410 SUPERFAMILY SSF56300 170 338 1.27E-57 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS13190 da6d33178a88a3c94d33fe9f27259f18 212 Pfam PF03550 Outer membrane lipoprotein LolB 55 208 4.0E-43 T 06-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM402_RS13190 da6d33178a88a3c94d33fe9f27259f18 212 Gene3D G3DSA:2.50.20.10 17 210 8.7E-58 T 06-07-2017 AM402_RS13190 da6d33178a88a3c94d33fe9f27259f18 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 11 209 1.5E-58 T 06-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM402_RS13190 da6d33178a88a3c94d33fe9f27259f18 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 9 210 25.7 T 06-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM402_RS13190 da6d33178a88a3c94d33fe9f27259f18 212 SUPERFAMILY SSF89392 40 210 3.33E-48 T 06-07-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM402_RS14825 2ca07bb5d8b860813aa87f85d02b96ed 85 Gene3D G3DSA:1.10.260.40 9 77 1.6E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14825 2ca07bb5d8b860813aa87f85d02b96ed 85 SUPERFAMILY SSF47413 5 44 8.88E-8 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14825 2ca07bb5d8b860813aa87f85d02b96ed 85 Pfam PF01381 Helix-turn-helix 6 48 1.3E-5 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS14240 61052c03d1698f108451ab7087c85b74 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 1.9E-118 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS14240 61052c03d1698f108451ab7087c85b74 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 06-07-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM402_RS14240 61052c03d1698f108451ab7087c85b74 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 1.5E-236 T 06-07-2017 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM402_RS14240 61052c03d1698f108451ab7087c85b74 417 Gene3D G3DSA:3.40.718.10 13 417 4.5E-169 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS14240 61052c03d1698f108451ab7087c85b74 417 SUPERFAMILY SSF53659 4 417 4.8E-151 T 06-07-2017 AM402_RS14240 61052c03d1698f108451ab7087c85b74 417 SMART SM01329 29 413 1.1E-183 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS16895 1627448f793f5b7cc7aa254f546c319b 134 Hamap MF_00128 Protein NrdI [nrdI]. 6 133 33.154 T 06-07-2017 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial AM402_RS16895 1627448f793f5b7cc7aa254f546c319b 134 PIRSF PIRSF005087 4 134 2.3E-51 T 06-07-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM402_RS16895 1627448f793f5b7cc7aa254f546c319b 134 TIGRFAM TIGR00333 nrdI: nrdI protein 8 130 1.3E-49 T 06-07-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM402_RS16895 1627448f793f5b7cc7aa254f546c319b 134 Gene3D G3DSA:3.40.50.360 7 132 7.6E-54 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS16895 1627448f793f5b7cc7aa254f546c319b 134 Pfam PF07972 NrdI Flavodoxin like 8 123 2.4E-46 T 06-07-2017 IPR004465 Ribonucleotide reductase Class Ib, NrdI AM402_RS16895 1627448f793f5b7cc7aa254f546c319b 134 SUPERFAMILY SSF52218 6 132 3.07E-22 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SMART SM00532 4 449 8.0E-285 T 06-07-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SMART SM00292 597 674 1.5E-15 T 06-07-2017 IPR001357 BRCT domain AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 06-07-2017 IPR018239 NAD-dependent DNA ligase, active site AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Pfam PF14520 Helix-hairpin-helix domain 447 503 5.7E-6 T 06-07-2017 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SUPERFAMILY SSF47781 404 579 6.67E-58 T 06-07-2017 IPR010994 RuvA domain 2-like AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Gene3D G3DSA:1.10.150.20 436 503 1.9E-28 T 06-07-2017 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 PIRSF PIRSF001604 1 675 1.8E-258 T 06-07-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Gene3D G3DSA:1.10.287.610 2 67 1.7E-29 T 06-07-2017 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Pfam PF12826 Helix-hairpin-helix motif 511 574 4.0E-23 T 06-07-2017 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SUPERFAMILY SSF52113 595 673 8.18E-20 T 06-07-2017 IPR001357 BRCT domain AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 670 2.1E-14 T 06-07-2017 IPR001357 BRCT domain AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SMART SM00278 513 532 640.0 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SMART SM00278 447 466 24.0 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SMART SM00278 481 500 2.1 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SMART SM00278 545 564 170.0 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SUPERFAMILY SSF56091 3 316 4.89E-124 T 06-07-2017 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 SUPERFAMILY SSF50249 319 401 6.34E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 06-07-2017 IPR033136 NAD-dependent DNA ligase, conserved site AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Hamap MF_01588 DNA ligase [ligA]. 3 671 54.786 T 06-07-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 667 4.8E-272 T 06-07-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Gene3D G3DSA:3.30.470.30 120 253 6.3E-53 T 06-07-2017 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 2.4E-9 T 06-07-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Gene3D G3DSA:3.40.50.10190 596 673 1.7E-26 T 06-07-2017 IPR001357 BRCT domain AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 3.6E-36 T 06-07-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Gene3D G3DSA:2.40.50.140 320 392 1.0E-34 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Gene3D G3DSA:1.10.150.20 505 585 3.5E-29 T 06-07-2017 AM402_RS08750 37a4d0ca869b8a1d7fdec8d35f60c3c0 675 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 3.5E-140 T 06-07-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AM402_RS19520 a263c2c743ff6d71e30d6fda47613e1d 101 Pfam PF13997 YqjK-like protein 18 90 5.1E-28 T 06-07-2017 IPR025612 YqjK-like protein AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 06-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 Gene3D G3DSA:3.40.50.720 191 307 6.2E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 SUPERFAMILY SSF50129 1 185 1.03E-70 T 06-07-2017 IPR011032 GroES-like AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.4E-222 T 06-07-2017 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 SUPERFAMILY SSF51735 161 334 1.56E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 Pfam PF00107 Zinc-binding dehydrogenase 197 330 3.5E-21 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 SUPERFAMILY SSF50129 318 369 1.88E-12 T 06-07-2017 IPR011032 GroES-like AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 SMART SM00829 10 367 5.9E-5 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 2.5E-26 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM402_RS16715 fd846e084fb0949e3e8a0aa82cecba2f 370 Gene3D G3DSA:3.90.180.10 2 190 4.4E-68 T 06-07-2017 IPR011032 GroES-like AM402_RS01775 55ad6518bbaa20de98a3c4f538fa3962 333 Gene3D G3DSA:3.40.50.2000 154 327 1.7E-32 T 06-07-2017 AM402_RS01775 55ad6518bbaa20de98a3c4f538fa3962 333 SUPERFAMILY SSF53756 4 328 2.74E-59 T 06-07-2017 AM402_RS01775 55ad6518bbaa20de98a3c4f538fa3962 333 Gene3D G3DSA:3.40.50.2000 4 136 6.2E-19 T 06-07-2017 AM402_RS01775 55ad6518bbaa20de98a3c4f538fa3962 333 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 117 311 7.0E-24 T 06-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 Gene3D G3DSA:1.20.1560.10 11 331 1.6E-41 T 06-07-2017 AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 SUPERFAMILY SSF90123 5 335 6.93E-54 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 Pfam PF00664 ABC transporter transmembrane region 26 292 3.7E-38 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 Pfam PF00005 ABC transporter 370 514 2.9E-26 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 557 3.4E-193 T 06-07-2017 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 Gene3D G3DSA:3.40.50.300 365 577 3.8E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 SMART SM00382 376 561 1.2E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15520 fca87997eda7744835de5183dd9063d3 589 SUPERFAMILY SSF52540 365 583 5.76E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04075 ca0132bcabcb1dfbf339e25e549c0298 138 SUPERFAMILY SSF103481 32 113 1.28E-16 T 06-07-2017 AM402_RS04075 ca0132bcabcb1dfbf339e25e549c0298 138 Pfam PF00893 Small Multidrug Resistance protein 7 101 2.9E-19 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 AM402_RS13915 a013c64d12437868026e66371725b1b6 59 Pfam PF13973 Domain of unknown function (DUF4222) 7 59 8.3E-19 T 06-07-2017 IPR025317 Protein of unknown function DUF4222 AM402_RS21380 4294a9c8ea1d64ffd3484fc7a324db2b 73 Pfam PF07383 Protein of unknown function (DUF1496) 26 60 3.1E-6 T 06-07-2017 IPR009971 Protein of unknown function DUF1496 AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 Gene3D G3DSA:1.10.10.60 271 319 1.7E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 Gene3D G3DSA:3.40.50.880 12 223 1.9E-42 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 SUPERFAMILY SSF46689 216 266 2.55E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 SUPERFAMILY SSF46689 270 319 3.32E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 Pfam PF01965 DJ-1/PfpI family 11 174 9.3E-12 T 06-07-2017 IPR002818 DJ-1/PfpI AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 Gene3D G3DSA:1.10.10.60 224 270 3.8E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 Pfam PF12833 Helix-turn-helix domain 239 317 4.3E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 SMART SM00342 233 316 9.9E-22 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS05430 42534a579a6d37105df3c92ffe6b438d 321 SUPERFAMILY SSF52317 11 198 4.75E-41 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS04350 86e3d81bba1b2c75dc277d08de4d49cd 406 Gene3D G3DSA:3.30.1540.10 228 311 3.3E-4 T 06-07-2017 AM402_RS04350 86e3d81bba1b2c75dc277d08de4d49cd 406 Pfam PF02515 CoA-transferase family III 13 379 1.9E-93 T 06-07-2017 IPR003673 CoA-transferase family III GO:0003824 AM402_RS04350 86e3d81bba1b2c75dc277d08de4d49cd 406 SUPERFAMILY SSF89796 6 402 1.57E-98 T 06-07-2017 IPR023606 CoA-transferase family III domain AM402_RS04350 86e3d81bba1b2c75dc277d08de4d49cd 406 Hamap MF_01050 L-carnitine CoA-transferase [caiB]. 2 406 89.449 T 06-07-2017 IPR023452 L-carnitine CoA-transferase CaiB GO:0009437|GO:0016782 AM402_RS04350 86e3d81bba1b2c75dc277d08de4d49cd 406 Gene3D G3DSA:3.40.50.10540 312 402 4.1E-74 T 06-07-2017 IPR023606 CoA-transferase family III domain AM402_RS04350 86e3d81bba1b2c75dc277d08de4d49cd 406 Gene3D G3DSA:3.40.50.10540 10 217 4.1E-74 T 06-07-2017 IPR023606 CoA-transferase family III domain AM402_RS03720 998911cfde79dca84a926c2b09a7f8d2 650 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 161 613 1.5E-224 T 06-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM402_RS03720 998911cfde79dca84a926c2b09a7f8d2 650 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 161 615 56.659 T 06-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM402_RS03720 998911cfde79dca84a926c2b09a7f8d2 650 Pfam PF01964 Radical SAM ThiC family 162 610 2.9E-201 T 06-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM402_RS03720 998911cfde79dca84a926c2b09a7f8d2 650 Pfam PF13667 ThiC-associated domain 41 122 4.2E-32 T 06-07-2017 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM402_RS18105 89b44ce1786eb3981fe751b0c2dfbfd2 548 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 5 548 36.527 T 06-07-2017 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 AM402_RS18105 89b44ce1786eb3981fe751b0c2dfbfd2 548 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 12 241 1.5E-25 T 06-07-2017 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 1.5E-241 T 06-07-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 Gene3D G3DSA:3.40.30.10 1 94 1.0E-33 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 Gene3D G3DSA:3.50.50.60 333 447 5.0E-29 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 Pfam PF13192 Thioredoxin domain 126 193 2.7E-7 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 3.8E-66 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 502 1.2E-47 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 SUPERFAMILY SSF52833 106 196 5.16E-24 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 SUPERFAMILY SSF51905 207 514 9.88E-49 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 1.8E-38 T 06-07-2017 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 1.8E-38 T 06-07-2017 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 1.8E-38 T 06-07-2017 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 1.8E-38 T 06-07-2017 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 1.8E-38 T 06-07-2017 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 SUPERFAMILY SSF52833 1 101 7.04E-30 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 PIRSF PIRSF000238 1 521 3.1E-261 T 06-07-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 Gene3D G3DSA:3.50.50.60 448 517 2.5E-12 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 Gene3D G3DSA:3.40.30.10 106 196 2.3E-36 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 Gene3D G3DSA:3.50.50.60 210 332 2.2E-22 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS12700 3c19f6b6d2c117aaf33f35483d275cfc 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 06-07-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM402_RS10040 2b83971fa82ef9ecf601bd512814bcdf 459 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 5.3E-20 T 06-07-2017 IPR032525 Peptidase family U32, C-terminal AM402_RS10040 2b83971fa82ef9ecf601bd512814bcdf 459 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM402_RS10040 2b83971fa82ef9ecf601bd512814bcdf 459 Pfam PF01136 Peptidase family U32 75 343 2.5E-97 T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 Pfam PF00571 CBS domain 343 393 5.1E-5 T 06-07-2017 IPR000644 CBS domain AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 Gene3D G3DSA:3.40.50.300 5 264 1.1E-78 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 SUPERFAMILY SSF52540 38 264 4.51E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 1.6E-165 T 06-07-2017 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 Pfam PF00005 ABC transporter 45 192 3.6E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 Gene3D G3DSA:3.10.580.10 272 395 1.1E-20 T 06-07-2017 AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 SMART SM00382 53 242 1.1E-19 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS16910 eeccf8227c83d3d9755df5276ae597e3 399 SUPERFAMILY SSF54631 276 396 4.32E-12 T 06-07-2017 AM402_RS13635 79add2a5b70c4d8985b23a6e8f36fcfc 213 Gene3D G3DSA:3.90.1530.10 41 154 1.3E-9 T 06-07-2017 AM402_RS13635 79add2a5b70c4d8985b23a6e8f36fcfc 213 Pfam PF02195 ParB-like nuclease domain 50 143 6.7E-7 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS13635 79add2a5b70c4d8985b23a6e8f36fcfc 213 SMART SM00470 48 150 0.0011 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS13635 79add2a5b70c4d8985b23a6e8f36fcfc 213 SUPERFAMILY SSF110849 46 184 4.36E-17 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS04455 5e5dda046717d133b1d6c9dea576f999 731 SUPERFAMILY SSF117892 60 208 7.19E-10 T 06-07-2017 IPR001107 Band 7 domain AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 Gene3D G3DSA:3.40.50.300 237 358 1.5E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 SMART SM00487 1 185 1.1E-16 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 Pfam PF00271 Helicase conserved C-terminal domain 242 343 8.2E-12 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 SUPERFAMILY SSF52540 237 362 1.07E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 SUPERFAMILY SSF52540 50 202 1.07E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 SMART SM00490 263 345 3.2E-6 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 SUPERFAMILY SSF57829 424 466 2.38E-6 T 06-07-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 Gene3D G3DSA:3.40.50.300 3 155 8.0E-32 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14565 59f44ce976cedf187c277b23a7bc8d64 587 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 6.0E-25 T 06-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 Pfam PF12833 Helix-turn-helix domain 28 106 5.5E-25 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 3.9E-8 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 3.9E-8 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 SUPERFAMILY SSF46689 58 107 8.36E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 Gene3D G3DSA:1.10.10.60 3 58 7.6E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 SUPERFAMILY SSF46689 5 56 1.36E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 Gene3D G3DSA:1.10.10.60 59 108 1.1E-21 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13305 eb37122134bc44c9b7758260c9b24722 122 SMART SM00342 22 105 4.3E-34 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12125 c869773486276dd0b6ea6690846073d6 239 Pfam PF01569 PAP2 superfamily 81 233 7.6E-26 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS12125 c869773486276dd0b6ea6690846073d6 239 SMART SM00014 80 228 1.7E-25 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS12125 c869773486276dd0b6ea6690846073d6 239 Gene3D G3DSA:1.20.144.10 40 121 3.4E-30 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS12125 c869773486276dd0b6ea6690846073d6 239 Gene3D G3DSA:1.20.144.10 157 237 3.4E-30 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS12125 c869773486276dd0b6ea6690846073d6 239 SUPERFAMILY SSF48317 151 237 1.13E-28 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS12125 c869773486276dd0b6ea6690846073d6 239 SUPERFAMILY SSF48317 14 114 1.13E-28 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS14005 0227fff5a732d4a5d0363d8c622e75b2 1037 Pfam PF13550 Putative phage tail protein 288 423 4.8E-10 T 06-07-2017 IPR032876 Tip attachment protein J AM402_RS14005 0227fff5a732d4a5d0363d8c622e75b2 1037 SUPERFAMILY SSF49265 513 647 5.68E-8 T 06-07-2017 IPR003961 Fibronectin type III GO:0005515 AM402_RS14005 0227fff5a732d4a5d0363d8c622e75b2 1037 Pfam PF09327 Domain of unknown function (DUF1983) 885 962 4.0E-24 T 06-07-2017 IPR015406 Domain of unknown function DUF1983 AM402_RS14005 0227fff5a732d4a5d0363d8c622e75b2 1037 Gene3D G3DSA:2.60.40.10 572 648 8.7E-6 T 06-07-2017 IPR013783 Immunoglobulin-like fold AM402_RS14005 0227fff5a732d4a5d0363d8c622e75b2 1037 SMART SM00060 464 541 4.6 T 06-07-2017 IPR003961 Fibronectin type III GO:0005515 AM402_RS14005 0227fff5a732d4a5d0363d8c622e75b2 1037 SMART SM00060 554 639 1.9 T 06-07-2017 IPR003961 Fibronectin type III GO:0005515 AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 45 755 3.9E-131 T 06-07-2017 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 SUPERFAMILY SSF52540 653 748 1.56E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 SUPERFAMILY SSF52540 326 381 1.56E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 Pfam PF11867 Domain of unknown function (DUF3387) 753 1088 2.7E-99 T 06-07-2017 IPR021810 Protein of unknown function DUF3387 AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 SMART SM00487 289 513 9.2E-10 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 SUPERFAMILY SSF52540 244 528 5.45E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 Gene3D G3DSA:3.40.50.300 583 618 2.9E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 Gene3D G3DSA:3.40.50.300 659 754 2.9E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 236 3.6E-36 T 06-07-2017 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 Pfam PF04851 Type III restriction enzyme, res subunit 328 486 1.9E-13 T 06-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM402_RS08280 8806bcf3dd153c92f46a9185a5a72de5 1092 Gene3D G3DSA:3.40.50.300 301 489 6.9E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09090 6358c1bb8af78a551ddf58033180e532 609 Gene3D G3DSA:3.30.70.1450 321 393 1.1E-21 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS09090 6358c1bb8af78a551ddf58033180e532 609 Gene3D G3DSA:3.30.70.1450 231 310 5.3E-18 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS09090 6358c1bb8af78a551ddf58033180e532 609 Pfam PF03600 Citrate transporter 16 197 9.2E-38 T 06-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AM402_RS09090 6358c1bb8af78a551ddf58033180e532 609 Pfam PF03600 Citrate transporter 429 607 3.7E-19 T 06-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AM402_RS09090 6358c1bb8af78a551ddf58033180e532 609 Pfam PF02080 TrkA-C domain 325 385 1.5E-11 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS09090 6358c1bb8af78a551ddf58033180e532 609 Pfam PF02080 TrkA-C domain 230 302 1.1E-17 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS09090 6358c1bb8af78a551ddf58033180e532 609 SUPERFAMILY SSF116726 316 389 6.54E-17 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS09090 6358c1bb8af78a551ddf58033180e532 609 SUPERFAMILY SSF116726 231 289 2.62E-10 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS17905 b68bfb7ab2083f6d06b35e8711cfc499 256 Gene3D G3DSA:3.40.50.2020 174 248 1.9E-10 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS17905 b68bfb7ab2083f6d06b35e8711cfc499 256 Gene3D G3DSA:3.40.50.2020 69 140 1.9E-10 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS17905 b68bfb7ab2083f6d06b35e8711cfc499 256 Pfam PF00156 Phosphoribosyl transferase domain 184 250 9.8E-8 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM402_RS17905 b68bfb7ab2083f6d06b35e8711cfc499 256 SUPERFAMILY SSF53271 207 245 9.66E-9 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS17905 b68bfb7ab2083f6d06b35e8711cfc499 256 SUPERFAMILY SSF53271 59 155 9.66E-9 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS16300 698f07d67a5b744e4f478cf44d0862e2 464 Pfam PF03573 outer membrane porin, OprD family 32 431 4.8E-23 T 06-07-2017 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM402_RS16300 698f07d67a5b744e4f478cf44d0862e2 464 Gene3D G3DSA:2.40.160.10 38 464 1.2E-52 T 06-07-2017 IPR023614 Porin domain AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 SMART SM00342 144 227 9.6E-31 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 Pfam PF12833 Helix-turn-helix domain 150 228 4.1E-23 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 196 211 9.4E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 211 227 9.4E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 SUPERFAMILY SSF51182 14 62 4.28E-6 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 SUPERFAMILY SSF46689 181 228 8.96E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 Gene3D G3DSA:1.10.10.60 136 180 9.0E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 Gene3D G3DSA:1.10.10.60 181 228 4.6E-19 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13405 4bda2c9912ad53e6c975c34c0fc990f2 228 Gene3D G3DSA:2.60.120.10 15 62 1.4E-6 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS05385 1ddb55554b32ca155365f7c85d373887 230 Pfam PF13098 Thioredoxin-like domain 106 214 7.0E-15 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS05385 1ddb55554b32ca155365f7c85d373887 230 SUPERFAMILY SSF54423 30 74 1.96E-8 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM402_RS05385 1ddb55554b32ca155365f7c85d373887 230 Gene3D G3DSA:3.40.30.10 106 227 1.6E-22 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS05385 1ddb55554b32ca155365f7c85d373887 230 Gene3D G3DSA:3.10.450.70 30 76 9.7E-12 T 06-07-2017 IPR009094 Disulphide bond isomerase, DsbC, N-terminal AM402_RS05385 1ddb55554b32ca155365f7c85d373887 230 SUPERFAMILY SSF52833 61 219 6.65E-21 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS05385 1ddb55554b32ca155365f7c85d373887 230 Pfam PF10411 Disulfide bond isomerase protein N-terminus 22 72 1.4E-8 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM402_RS10165 b69485bfea46c9aa7a8e0c2bacdc87d9 490 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 489 42.341 T 06-07-2017 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AM402_RS10165 b69485bfea46c9aa7a8e0c2bacdc87d9 490 Gene3D G3DSA:3.30.2010.10 69 152 1.4E-17 T 06-07-2017 AM402_RS10165 b69485bfea46c9aa7a8e0c2bacdc87d9 490 Pfam PF01435 Peptidase family M48 75 261 3.3E-27 T 06-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM402_RS10165 b69485bfea46c9aa7a8e0c2bacdc87d9 490 SUPERFAMILY SSF48452 286 463 1.74E-13 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS10165 b69485bfea46c9aa7a8e0c2bacdc87d9 490 Gene3D G3DSA:1.25.40.10 271 460 2.5E-16 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS10165 b69485bfea46c9aa7a8e0c2bacdc87d9 490 Pfam PF14559 Tetratricopeptide repeat 358 422 6.3E-11 T 06-07-2017 AM402_RS02180 49c0b20266c4505c0c7fe4daeaa88912 563 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 275 5.9E-10 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02180 49c0b20266c4505c0c7fe4daeaa88912 563 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 370 547 1.6E-12 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02180 49c0b20266c4505c0c7fe4daeaa88912 563 SUPERFAMILY SSF161098 23 274 3.53E-44 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02180 49c0b20266c4505c0c7fe4daeaa88912 563 Gene3D G3DSA:1.10.3720.10 23 275 4.1E-46 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02180 49c0b20266c4505c0c7fe4daeaa88912 563 Gene3D G3DSA:1.10.3720.10 293 542 1.0E-28 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02180 49c0b20266c4505c0c7fe4daeaa88912 563 SUPERFAMILY SSF161098 301 541 1.2E-32 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02180 49c0b20266c4505c0c7fe4daeaa88912 563 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 23 558 3.5E-222 T 06-07-2017 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AM402_RS17215 d3401b535817a1a1da94f44564b064c5 70 Pfam PF05532 CsbD-like 4 56 1.8E-17 T 06-07-2017 IPR008462 CsbD-like AM402_RS17215 d3401b535817a1a1da94f44564b064c5 70 PIRSF PIRSF039008 1 66 5.1E-25 T 06-07-2017 IPR026042 Stress response protein YjbJ AM402_RS17215 d3401b535817a1a1da94f44564b064c5 70 SUPERFAMILY SSF69047 1 68 1.2E-21 T 06-07-2017 IPR008462 CsbD-like AM402_RS17215 d3401b535817a1a1da94f44564b064c5 70 Gene3D G3DSA:1.10.1470.10 1 66 9.2E-26 T 06-07-2017 IPR008462 CsbD-like AM402_RS03285 db3f8c82c9bf15f6b98544c5d097078a 239 Gene3D G3DSA:3.40.1280.10 3 177 5.3E-46 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM402_RS03285 db3f8c82c9bf15f6b98544c5d097078a 239 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 217 4.8E-22 T 06-07-2017 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AM402_RS03285 db3f8c82c9bf15f6b98544c5d097078a 239 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.732 T 06-07-2017 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AM402_RS03285 db3f8c82c9bf15f6b98544c5d097078a 239 SUPERFAMILY SSF75217 4 174 3.79E-47 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases AM402_RS03285 db3f8c82c9bf15f6b98544c5d097078a 239 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.8E-32 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM402_RS12970 778a85fc6946f9f0c10de2c1216f0daf 114 Pfam PF01042 Endoribonuclease L-PSP 3 113 3.3E-24 T 06-07-2017 IPR006175 YjgF/YER057c/UK114 family AM402_RS12970 778a85fc6946f9f0c10de2c1216f0daf 114 SUPERFAMILY SSF55298 2 113 2.98E-26 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS12970 778a85fc6946f9f0c10de2c1216f0daf 114 Gene3D G3DSA:3.30.1330.40 4 113 2.8E-20 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 06-07-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.237 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 SUPERFAMILY SSF50104 2 115 9.03E-48 T 06-07-2017 IPR008991 Translation protein SH3-like domain AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 PIRSF PIRSF002191 1 117 7.8E-50 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.2E-52 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17065 a2788714b438203834b2768e65d38b4e 117 Pfam PF01245 Ribosomal protein L19 3 113 8.7E-50 T 06-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS04155 966ee1822362b041024605db8f38ba67 358 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 104 123 7.2E-11 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 AM402_RS04155 966ee1822362b041024605db8f38ba67 358 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 168 186 7.2E-11 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 AM402_RS04155 966ee1822362b041024605db8f38ba67 358 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 42 62 7.2E-11 T 06-07-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 AM402_RS04155 966ee1822362b041024605db8f38ba67 358 SUPERFAMILY SSF140591 78 250 9.42E-38 T 06-07-2017 AM402_RS04155 966ee1822362b041024605db8f38ba67 358 Pfam PF07201 HrpJ-like domain 47 204 1.1E-29 T 06-07-2017 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 AM402_RS04155 966ee1822362b041024605db8f38ba67 358 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 65 252 1.5E-33 T 06-07-2017 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 AM402_RS09755 18da0318fd0f234185ff9087041294b3 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.1E-29 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS09755 18da0318fd0f234185ff9087041294b3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.9E-22 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS09755 18da0318fd0f234185ff9087041294b3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.9E-22 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS09755 18da0318fd0f234185ff9087041294b3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.9E-22 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS09755 18da0318fd0f234185ff9087041294b3 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 7.3E-33 T 06-07-2017 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AM402_RS09755 18da0318fd0f234185ff9087041294b3 89 PIRSF PIRSF004669 1 89 2.2E-31 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 Gene3D G3DSA:3.50.50.60 2 295 5.7E-39 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 485 6.0E-11 T 06-07-2017 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 1.1E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 1.1E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 1.1E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 1.1E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 1.1E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 1.1E-28 T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 SUPERFAMILY SSF54373 226 319 1.33E-6 T 06-07-2017 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 06-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 SUPERFAMILY SSF51905 312 374 1.07E-36 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 SUPERFAMILY SSF51905 1 260 1.07E-36 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02990 6effdb639e05f44db7381036b1c879fc 497 Pfam PF01266 FAD dependent oxidoreductase 5 323 3.3E-46 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM402_RS12900 68f4d1fd1bacc15e2e9e36cdebb43453 216 SUPERFAMILY SSF52540 6 210 1.25E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12900 68f4d1fd1bacc15e2e9e36cdebb43453 216 SMART SM00382 32 215 1.7E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS12900 68f4d1fd1bacc15e2e9e36cdebb43453 216 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS12900 68f4d1fd1bacc15e2e9e36cdebb43453 216 Gene3D G3DSA:3.40.50.300 10 210 1.5E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12900 68f4d1fd1bacc15e2e9e36cdebb43453 216 Pfam PF00005 ABC transporter 23 166 5.0E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 1.8E-280 T 06-07-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 SUPERFAMILY SSF50249 67 147 1.53E-16 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 Pfam PF00575 S1 RNA binding domain 642 725 1.8E-17 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 1.3E-271 T 06-07-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 Pfam PF08206 Ribonuclease B OB domain 87 144 8.4E-22 T 06-07-2017 IPR013223 Ribonuclease B, N-terminal OB domain AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 Pfam PF08206 Ribonuclease B OB domain 159 213 2.6E-5 T 06-07-2017 IPR013223 Ribonuclease B, N-terminal OB domain AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 SUPERFAMILY SSF50249 138 236 1.54E-17 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 06-07-2017 IPR022966 Ribonuclease II/R, conserved site AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 SMART SM00955 260 588 2.8E-182 T 06-07-2017 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 SMART SM00316 643 726 4.8E-16 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 Pfam PF00773 RNB domain 260 585 6.0E-110 T 06-07-2017 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 Pfam PF08461 Ribonuclease R winged-helix domain 23 83 3.4E-14 T 06-07-2017 IPR013668 Ribonuclease R winged-helix domain AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 SMART SM00357 86 145 9.6E-14 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 57.468 T 06-07-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 Gene3D G3DSA:2.40.50.140 645 732 1.8E-22 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 SUPERFAMILY SSF50249 222 642 2.23E-141 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00365 edb233bb70c998a25026361040d0eae2 829 SUPERFAMILY SSF50249 643 735 1.37E-22 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 534 1.3E-157 T 06-07-2017 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 Gene3D G3DSA:1.20.1560.10 7 322 1.1E-27 T 06-07-2017 AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 Gene3D G3DSA:3.40.50.300 339 569 1.5E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 SUPERFAMILY SSF52540 336 574 3.86E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 Pfam PF00005 ABC transporter 357 503 4.1E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 SMART SM00382 365 550 5.8E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 Pfam PF00664 ABC transporter transmembrane region 53 273 2.1E-8 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS15525 b25757fdfd67e2b9fe11888b65409f89 583 SUPERFAMILY SSF90123 7 327 1.31E-40 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS08140 05c2756be624a42e9c95e891fcc603e6 388 Pfam PF07690 Major Facilitator Superfamily 20 196 1.6E-16 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS08140 05c2756be624a42e9c95e891fcc603e6 388 Gene3D G3DSA:1.20.1250.20 209 381 1.1E-13 T 06-07-2017 AM402_RS08140 05c2756be624a42e9c95e891fcc603e6 388 Gene3D G3DSA:1.20.1250.20 18 193 2.2E-15 T 06-07-2017 AM402_RS08140 05c2756be624a42e9c95e891fcc603e6 388 SUPERFAMILY SSF103473 19 382 8.37E-37 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS10740 b811418b5a47f95501d074ce3425ee2b 174 Gene3D G3DSA:1.20.1550.10 1 171 8.0E-63 T 06-07-2017 IPR023380 Disulphide bond formation protein DsbB-like domain AM402_RS10740 b811418b5a47f95501d074ce3425ee2b 174 SUPERFAMILY SSF158442 15 162 9.29E-44 T 06-07-2017 AM402_RS10740 b811418b5a47f95501d074ce3425ee2b 174 Pfam PF02600 Disulfide bond formation protein DsbB 12 160 6.6E-43 T 06-07-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AM402_RS10740 b811418b5a47f95501d074ce3425ee2b 174 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 168 22.091 T 06-07-2017 IPR022920 Disulphide bond formation protein DsbB AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 2.5E-5 T 06-07-2017 AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 2.5E-5 T 06-07-2017 AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 Pfam PF10415 Fumarase C C-terminus 408 461 7.7E-26 T 06-07-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 2.1E-246 T 06-07-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 6.9E-34 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 6.9E-34 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 6.9E-34 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 6.9E-34 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 Gene3D G3DSA:1.10.275.10 3 138 1.8E-59 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 93.134 T 06-07-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 Gene3D G3DSA:1.10.40.30 417 462 1.7E-33 T 06-07-2017 AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 Gene3D G3DSA:1.20.200.10 139 416 8.0E-107 T 06-07-2017 AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 Pfam PF00206 Lyase 12 342 5.2E-122 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal AM402_RS12220 2ad220340e7cd3771cf80109e392c773 465 SUPERFAMILY SSF48557 4 460 9.42E-160 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 AM402_RS12010 b532265eff68f53268ad204673f04856 206 Gene3D G3DSA:3.90.870.10 2 202 5.0E-64 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AM402_RS12010 b532265eff68f53268ad204673f04856 206 Pfam PF01300 Telomere recombination 23 198 1.0E-46 T 06-07-2017 IPR006070 YrdC-like domain GO:0003725 AM402_RS12010 b532265eff68f53268ad204673f04856 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 4.0E-73 T 06-07-2017 IPR006070 YrdC-like domain GO:0003725 AM402_RS12010 b532265eff68f53268ad204673f04856 206 SUPERFAMILY SSF55821 1 203 1.22E-65 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AM402_RS10970 7d6479d53e5408f520f70a882d6130dc 111 Pfam PF01381 Helix-turn-helix 30 81 1.2E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS10970 7d6479d53e5408f520f70a882d6130dc 111 SUPERFAMILY SSF47413 23 95 5.38E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS10970 7d6479d53e5408f520f70a882d6130dc 111 Gene3D G3DSA:1.10.260.40 23 83 2.8E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS10970 7d6479d53e5408f520f70a882d6130dc 111 SMART SM00530 26 81 1.4E-9 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS04460 7f9149c6160052141cd9bacbdceb2657 209 Pfam PF01957 NfeD-like C-terminal, partner-binding 72 193 6.7E-6 T 06-07-2017 IPR002810 NfeD-like, C-terminal domain AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 SUPERFAMILY SSF55831 1 283 2.62E-95 T 06-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 Pfam PF00303 Thymidylate synthase 2 283 1.4E-77 T 06-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.453 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 06-07-2017 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 Gene3D G3DSA:3.30.572.10 1 283 6.7E-83 T 06-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 5.5E-15 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 5.5E-15 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 5.5E-15 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 5.5E-15 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06070 e84e1b5090cc08b4fc2ad520b07fb715 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 3.2E-48 T 06-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AM402_RS06875 ae565f62c0d58d78f8a50ff68e455fb2 313 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 4.4E-98 T 06-07-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM402_RS06875 ae565f62c0d58d78f8a50ff68e455fb2 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS06875 ae565f62c0d58d78f8a50ff68e455fb2 313 PIRSF PIRSF000535 2 311 5.0E-109 T 06-07-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM402_RS06875 ae565f62c0d58d78f8a50ff68e455fb2 313 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 8.2E-100 T 06-07-2017 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AM402_RS06875 ae565f62c0d58d78f8a50ff68e455fb2 313 SUPERFAMILY SSF53613 7 291 1.2E-63 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS06875 ae565f62c0d58d78f8a50ff68e455fb2 313 Gene3D G3DSA:3.40.1190.20 36 310 7.0E-82 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS06875 ae565f62c0d58d78f8a50ff68e455fb2 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS06875 ae565f62c0d58d78f8a50ff68e455fb2 313 Pfam PF00294 pfkB family carbohydrate kinase 14 293 1.1E-59 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS11795 e800e8bc4f52694548596b867450613f 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 1.0E-13 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM402_RS11795 e800e8bc4f52694548596b867450613f 203 Gene3D G3DSA:3.40.30.10 1 88 1.2E-28 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS11795 e800e8bc4f52694548596b867450613f 203 Gene3D G3DSA:1.20.1050.10 89 188 9.4E-34 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AM402_RS11795 e800e8bc4f52694548596b867450613f 203 SUPERFAMILY SSF47616 84 195 5.85E-23 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AM402_RS11795 e800e8bc4f52694548596b867450613f 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 2.1E-14 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal AM402_RS11795 e800e8bc4f52694548596b867450613f 203 SUPERFAMILY SSF52833 1 78 2.24E-20 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS13355 4350768a7771890e4951b6a188321024 249 Pfam PF00005 ABC transporter 18 162 1.5E-20 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS13355 4350768a7771890e4951b6a188321024 249 SMART SM00382 24 210 7.3E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS13355 4350768a7771890e4951b6a188321024 249 SUPERFAMILY SSF52540 15 226 1.5E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13355 4350768a7771890e4951b6a188321024 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS13355 4350768a7771890e4951b6a188321024 249 Gene3D G3DSA:3.40.50.300 15 234 7.4E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02885 19c17dd956f40e0d49f7c2357d908eb1 253 SUPERFAMILY SSF88713 1 252 3.11E-76 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM402_RS02885 19c17dd956f40e0d49f7c2357d908eb1 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 38.657 T 06-07-2017 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 AM402_RS02885 19c17dd956f40e0d49f7c2357d908eb1 253 Pfam PF04794 YdjC-like protein 5 240 7.5E-60 T 06-07-2017 IPR006879 Chitooligosaccharide deacetylase ChbG-like AM402_RS02885 19c17dd956f40e0d49f7c2357d908eb1 253 Gene3D G3DSA:3.20.20.370 3 252 3.9E-81 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM402_RS18925 db1e4dd9d0701e5e97a6d01fb460ae67 294 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 5.9E-94 T 06-07-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM402_RS18925 db1e4dd9d0701e5e97a6d01fb460ae67 294 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 18.488 T 06-07-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM402_RS18925 db1e4dd9d0701e5e97a6d01fb460ae67 294 Pfam PF01040 UbiA prenyltransferase family 18 267 9.6E-61 T 06-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AM402_RS18925 db1e4dd9d0701e5e97a6d01fb460ae67 294 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 06-07-2017 IPR030470 UbiA prenyltransferase conserved site AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.449 T 06-07-2017 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 06-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 5.4E-27 T 06-07-2017 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 Gene3D G3DSA:3.40.50.720 2 112 2.3E-23 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 256 5.1E-36 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 SUPERFAMILY SSF52283 6 129 2.02E-17 T 06-07-2017 AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 280 2.1E-18 T 06-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 SUPERFAMILY SSF51735 95 257 1.38E-36 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08960 d42d930dd6d3f0b282013f2c89431a79 375 Gene3D G3DSA:3.40.50.720 113 259 1.1E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08555 d1213975f46def11bbe8097efed5a071 242 PIRSF PIRSF004808 1 242 5.0E-78 T 06-07-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM402_RS08555 d1213975f46def11bbe8097efed5a071 242 SUPERFAMILY SSF75217 4 166 2.16E-38 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases AM402_RS08555 d1213975f46def11bbe8097efed5a071 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 8.3E-87 T 06-07-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM402_RS08555 d1213975f46def11bbe8097efed5a071 242 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.9E-34 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM402_RS08555 d1213975f46def11bbe8097efed5a071 242 Gene3D G3DSA:3.40.1280.10 4 172 2.0E-33 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM402_RS09795 550475bbcd0e6709634734f2e5c9f02d 457 Gene3D G3DSA:3.40.50.300 137 420 1.1E-89 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09795 550475bbcd0e6709634734f2e5c9f02d 457 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 7 452 1.0E-189 T 06-07-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS09795 550475bbcd0e6709634734f2e5c9f02d 457 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS09795 550475bbcd0e6709634734f2e5c9f02d 457 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 372 1.8E-71 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS09795 550475bbcd0e6709634734f2e5c9f02d 457 SUPERFAMILY SSF52540 108 378 3.94E-94 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09795 550475bbcd0e6709634734f2e5c9f02d 457 SMART SM00382 173 356 3.5E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS09795 550475bbcd0e6709634734f2e5c9f02d 457 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 451 5.7E-198 T 06-07-2017 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Gene3D G3DSA:2.40.40.20 859 1026 5.9E-28 T 06-07-2017 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 SUPERFAMILY SSF53706 73 112 6.54E-110 T 06-07-2017 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 SUPERFAMILY SSF53706 139 870 6.54E-110 T 06-07-2017 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 SUPERFAMILY SSF50692 877 1000 3.16E-26 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Gene3D G3DSA:2.20.25.90 76 159 2.6E-11 T 06-07-2017 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Pfam PF01568 Molydopterin dinucleotide binding domain 897 1003 1.3E-13 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 SMART SM00926 73 155 1.5E-11 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Pfam PF00384 Molybdopterin oxidoreductase 245 689 1.2E-13 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Gene3D G3DSA:3.40.50.740 614 683 1.2E-33 T 06-07-2017 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Gene3D G3DSA:3.40.50.740 160 262 1.2E-33 T 06-07-2017 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Gene3D G3DSA:3.40.50.740 715 735 1.2E-33 T 06-07-2017 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Gene3D G3DSA:3.40.228.10 464 553 1.0E-39 T 06-07-2017 AM402_RS09535 492c096cc61cf18b643297eeff1af231 1027 Gene3D G3DSA:3.40.228.10 263 378 1.0E-39 T 06-07-2017 AM402_RS18755 8c732bf5ef54a3b4b008f651f7cf723b 180 Pfam PF07445 Primosomal replication protein priC 10 177 3.3E-52 T 06-07-2017 IPR010890 Primosomal replication PriB/PriC AM402_RS18995 7d267b7d3d0b00b85afcb639d14d3f9c 296 SUPERFAMILY SSF53822 26 295 5.13E-85 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS18995 7d267b7d3d0b00b85afcb639d14d3f9c 296 Gene3D G3DSA:3.40.50.2300 145 295 4.0E-55 T 06-07-2017 AM402_RS18995 7d267b7d3d0b00b85afcb639d14d3f9c 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.4E-55 T 06-07-2017 IPR025997 Periplasmic binding protein AM402_RS18995 7d267b7d3d0b00b85afcb639d14d3f9c 296 Gene3D G3DSA:3.40.50.2300 28 144 1.1E-40 T 06-07-2017 AM402_RS07345 5515ce8eba706effe2ec275d6713e8dd 114 Gene3D G3DSA:1.10.260.40 71 109 8.1E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS07345 5515ce8eba706effe2ec275d6713e8dd 114 SUPERFAMILY SSF47413 54 108 1.09E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS13155 9449257dd1639b35c682e6aa5189925a 92 Gene3D G3DSA:1.20.5.780 7 87 3.1E-28 T 06-07-2017 AM402_RS13155 9449257dd1639b35c682e6aa5189925a 92 Pfam PF08681 Protein of unknown function (DUF1778) 11 87 5.2E-26 T 06-07-2017 IPR014795 Vibrio phage ICP1, Orf50 AM402_RS13155 9449257dd1639b35c682e6aa5189925a 92 SUPERFAMILY SSF47598 8 84 3.78E-20 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 Pfam PF08245 Mur ligase middle domain 110 278 3.3E-26 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 SUPERFAMILY SSF53623 95 295 1.1E-53 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 433 3.9E-128 T 06-07-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 435 34.064 T 06-07-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 Gene3D G3DSA:3.90.190.20 299 431 1.4E-42 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 Gene3D G3DSA:3.40.1190.10 94 297 2.5E-63 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 370 5.6E-9 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 SUPERFAMILY SSF53244 297 435 6.41E-50 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 SUPERFAMILY SSF51984 3 94 3.14E-24 T 06-07-2017 AM402_RS07435 c74d3fe7774600e92bd19ce84509fd35 436 Gene3D G3DSA:3.40.50.720 3 92 1.1E-26 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06665 36a96265f606df170a2056512d8f51a6 274 Pfam PF11392 Protein of unknown function (DUF2877) 161 264 1.8E-26 T 06-07-2017 IPR021530 Protein of unknown function DUF2877 AM402_RS14805 7f12769b423b0c625fa1c963f84a4dc5 197 Gene3D G3DSA:3.40.50.300 4 183 1.0E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14805 7f12769b423b0c625fa1c963f84a4dc5 197 SMART SM00382 51 183 9.8E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS14805 7f12769b423b0c625fa1c963f84a4dc5 197 Pfam PF01695 IstB-like ATP binding protein 50 177 1.8E-21 T 06-07-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 AM402_RS14805 7f12769b423b0c625fa1c963f84a4dc5 197 SUPERFAMILY SSF52540 14 189 7.89E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07245 423d280212f5c57804dd02b9df99a485 493 SUPERFAMILY SSF53720 14 490 1.14E-170 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS07245 423d280212f5c57804dd02b9df99a485 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM402_RS07245 423d280212f5c57804dd02b9df99a485 493 Gene3D G3DSA:3.40.309.10 272 462 2.9E-72 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS07245 423d280212f5c57804dd02b9df99a485 493 Gene3D G3DSA:3.40.605.10 16 271 1.8E-97 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM402_RS07245 423d280212f5c57804dd02b9df99a485 493 Pfam PF00171 Aldehyde dehydrogenase family 25 487 6.8E-174 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM402_RS07755 eb98a5765a97f467e9fe4b703b7d9936 327 SUPERFAMILY SSF56349 61 315 2.44E-48 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS07755 eb98a5765a97f467e9fe4b703b7d9936 327 Gene3D G3DSA:1.10.443.10 161 316 1.6E-35 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS07755 eb98a5765a97f467e9fe4b703b7d9936 327 Gene3D G3DSA:1.10.150.130 76 145 2.7E-5 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS07755 eb98a5765a97f467e9fe4b703b7d9936 327 Pfam PF00589 Phage integrase family 164 307 8.4E-21 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS11790 aba8ede69b9cae86bc03dab1a47de597 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 288 51.781 T 06-07-2017 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AM402_RS11790 aba8ede69b9cae86bc03dab1a47de597 289 SUPERFAMILY SSF53613 1 283 1.51E-72 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS11790 aba8ede69b9cae86bc03dab1a47de597 289 Pfam PF08543 Phosphomethylpyrimidine kinase 67 263 9.5E-16 T 06-07-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 AM402_RS11790 aba8ede69b9cae86bc03dab1a47de597 289 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 288 5.1E-126 T 06-07-2017 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS11790 aba8ede69b9cae86bc03dab1a47de597 289 Gene3D G3DSA:3.40.1190.20 1 287 4.3E-88 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS20350 be4e4a949e73fc09a7dd5ec837d9560b 130 Pfam PF06078 Bacterial protein of unknown function (DUF937) 13 105 6.2E-7 T 06-07-2017 IPR009282 Protein of unknown function DUF937 AM402_RS20350 be4e4a949e73fc09a7dd5ec837d9560b 130 SUPERFAMILY SSF140804 3 125 1.14E-30 T 06-07-2017 IPR027405 YidB-like AM402_RS20350 be4e4a949e73fc09a7dd5ec837d9560b 130 Gene3D G3DSA:1.10.10.690 1 127 3.4E-40 T 06-07-2017 IPR027405 YidB-like AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 SUPERFAMILY SSF46785 24 128 7.8E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 SUPERFAMILY SSF53850 105 303 1.42E-33 T 06-07-2017 AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 6.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 6.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 6.5E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 Gene3D G3DSA:3.40.190.10 192 280 1.3E-14 T 06-07-2017 AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 Gene3D G3DSA:3.40.190.10 106 191 2.5E-22 T 06-07-2017 AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 80 6.6E-21 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 Gene3D G3DSA:1.10.10.10 23 100 8.9E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS21120 7a6f90d06cdfa792e946cf838f0abb68 327 Pfam PF03466 LysR substrate binding domain 105 303 1.6E-32 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 06-07-2017 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 Pfam PF01012 Electron transfer flavoprotein domain 45 165 1.3E-10 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 Gene3D G3DSA:3.40.50.620 4 167 3.8E-20 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 PIRSF PIRSF000089 14 312 4.3E-82 T 06-07-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 273 1.5E-30 T 06-07-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 SUPERFAMILY SSF52467 189 310 1.67E-42 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 Gene3D G3DSA:3.40.50.1220 185 311 1.8E-49 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 SUPERFAMILY SSF52402 7 169 1.59E-17 T 06-07-2017 AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 SMART SM00893 7 179 5.6E-4 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM402_RS04370 1b310bac30ffde84f5add99dca29cb56 312 Hamap MF_01056 Protein FixB [fixB]. 1 312 58.234 T 06-07-2017 IPR023461 Electron transfer flavoprotein FixB subunit GO:0009437 AM402_RS13755 365225020f230e0504f5434363207041 1180 Pfam PF13550 Putative phage tail protein 266 429 2.6E-9 T 06-07-2017 IPR032876 Tip attachment protein J AM402_RS13755 365225020f230e0504f5434363207041 1180 SMART SM00060 558 645 0.0051 T 06-07-2017 IPR003961 Fibronectin type III GO:0005515 AM402_RS13755 365225020f230e0504f5434363207041 1180 SMART SM00060 470 547 20.0 T 06-07-2017 IPR003961 Fibronectin type III GO:0005515 AM402_RS13755 365225020f230e0504f5434363207041 1180 Pfam PF09327 Domain of unknown function (DUF1983) 1089 1166 4.7E-24 T 06-07-2017 IPR015406 Domain of unknown function DUF1983 AM402_RS13755 365225020f230e0504f5434363207041 1180 Gene3D G3DSA:2.60.40.10 560 658 4.9E-7 T 06-07-2017 IPR013783 Immunoglobulin-like fold AM402_RS13755 365225020f230e0504f5434363207041 1180 SUPERFAMILY SSF49265 522 653 7.3E-9 T 06-07-2017 IPR003961 Fibronectin type III GO:0005515 AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 Gene3D G3DSA:3.30.70.360 191 300 3.4E-23 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 SUPERFAMILY SSF55031 191 284 1.7E-19 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 Pfam PF07687 Peptidase dimerisation domain 191 283 2.7E-10 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 SUPERFAMILY SSF53187 17 202 1.02E-63 T 06-07-2017 AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 SUPERFAMILY SSF53187 301 391 1.02E-63 T 06-07-2017 AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 Gene3D G3DSA:3.40.630.10 7 183 1.5E-74 T 06-07-2017 AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 Gene3D G3DSA:3.40.630.10 301 391 1.5E-74 T 06-07-2017 AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 Pfam PF01546 Peptidase family M20/M25/M40 76 391 6.8E-21 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 382 1.6E-81 T 06-07-2017 IPR017439 Amidohydrolase GO:0016787 AM402_RS01175 ec59a13bb902fa5217fbaa29c360f3f6 393 PIRSF PIRSF005962 5 393 3.2E-107 T 06-07-2017 IPR017439 Amidohydrolase GO:0016787 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 Gene3D G3DSA:1.10.287.130 228 296 5.8E-18 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 SMART SM00388 238 300 6.1E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 453 1.6E-18 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 1.8E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 1.8E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 1.8E-13 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 Gene3D G3DSA:3.30.565.10 302 453 5.0E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 160 6.3E-10 T 06-07-2017 IPR032404 Two-component sensor protein CpxA, periplasmic domain AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 SUPERFAMILY SSF55874 289 453 1.57E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 2.5E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 SUPERFAMILY SSF47384 224 298 8.83E-17 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 SMART SM00304 184 237 4.6E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 Pfam PF00672 HAMP domain 165 234 5.2E-11 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS01565 98e9518e7f2e4dcdbfd4744f7a19cedc 463 SMART SM00387 345 455 1.9E-30 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS10335 0b413df5895ef5c2d42ba19be0932e4a 574 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 385 548 5.1E-11 T 06-07-2017 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 06-07-2017 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 173 1.8E-51 T 06-07-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 466 2.5E-133 T 06-07-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 06-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 Gene3D G3DSA:1.20.5.320 436 467 9.2E-23 T 06-07-2017 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 Gene3D G3DSA:3.40.50.720 1 179 9.3E-60 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 SUPERFAMILY SSF51735 4 175 9.15E-51 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 SUPERFAMILY SSF48179 176 467 4.08E-134 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 Gene3D G3DSA:1.10.1040.10 180 433 1.9E-119 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 PIRSF PIRSF000109 1 468 3.8E-242 T 06-07-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 1.7E-230 T 06-07-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS15710 2f5fd6289b32ad4e7f92015b86ddf288 468 SMART SM01350 178 467 4.4E-226 T 06-07-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 Gene3D G3DSA:1.10.3680.10 22 204 1.6E-27 T 06-07-2017 IPR029024 TerB-like AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 265 38.567 T 06-07-2017 IPR023749 Co-chaperone DjlA GO:0051087 AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 SUPERFAMILY SSF46565 131 262 6.07E-30 T 06-07-2017 IPR001623 DnaJ domain AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 Pfam PF00226 DnaJ domain 200 262 1.9E-10 T 06-07-2017 IPR001623 DnaJ domain AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 PRINTS PR00625 DnaJ domain signature 202 220 5.2E-7 T 06-07-2017 IPR001623 DnaJ domain AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 PRINTS PR00625 DnaJ domain signature 220 235 5.2E-7 T 06-07-2017 IPR001623 DnaJ domain AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 PRINTS PR00625 DnaJ domain signature 244 264 5.2E-7 T 06-07-2017 IPR001623 DnaJ domain AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 SMART SM00271 199 264 3.2E-16 T 06-07-2017 IPR001623 DnaJ domain AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 SUPERFAMILY SSF158682 46 175 9.68E-16 T 06-07-2017 IPR029024 TerB-like AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 Pfam PF05099 Tellurite resistance protein TerB 47 171 1.3E-11 T 06-07-2017 IPR007791 Co-chaperone DjlA, N-terminal AM402_RS06020 c4bbffcc8424a54c52a1a1f1b4a8dadf 266 Gene3D G3DSA:1.10.287.110 205 262 9.8E-14 T 06-07-2017 IPR001623 DnaJ domain AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 SMART SM00138 28 289 5.5E-104 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 Pfam PF03705 CheR methyltransferase, all-alpha domain 30 80 3.1E-18 T 06-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 Pfam PF01739 CheR methyltransferase, SAM binding domain 96 282 8.5E-61 T 06-07-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 PRINTS PR00996 Glutamate methyltransferase family signature 89 101 3.4E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 PRINTS PR00996 Glutamate methyltransferase family signature 229 243 3.4E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 PRINTS PR00996 Glutamate methyltransferase family signature 50 63 3.4E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 PRINTS PR00996 Glutamate methyltransferase family signature 248 271 3.4E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 PRINTS PR00996 Glutamate methyltransferase family signature 123 143 3.4E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 PRINTS PR00996 Glutamate methyltransferase family signature 157 173 3.4E-47 T 06-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 SUPERFAMILY SSF47757 21 95 1.27E-22 T 06-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 Gene3D G3DSA:1.10.155.10 20 94 2.1E-29 T 06-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 Gene3D G3DSA:3.40.50.150 95 286 4.2E-69 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 SUPERFAMILY SSF53335 96 286 2.71E-58 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS09635 5bb2625ddc0e89c1f16a0eb4d68bee6f 296 PIRSF PIRSF000410 13 290 9.6E-101 T 06-07-2017 IPR026024 Chemotaxis protein methyltransferase CheR AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 Gene3D G3DSA:3.30.70.1400 54 137 4.7E-32 T 06-07-2017 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 PIRSF PIRSF006487 1 362 7.7E-79 T 06-07-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 42.899 T 06-07-2017 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 SUPERFAMILY SSF101790 272 361 2.45E-23 T 06-07-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 6.2E-143 T 06-07-2017 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 SUPERFAMILY SSF103025 3 277 1.05E-89 T 06-07-2017 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 Gene3D G3DSA:2.40.30.110 279 361 2.3E-25 T 06-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 2.4E-16 T 06-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 Gene3D G3DSA:3.30.1360.120 144 231 4.7E-52 T 06-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 Gene3D G3DSA:3.30.1360.120 3 53 4.7E-52 T 06-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM402_RS07685 9a4e1ea960f3e101a62fc8eaa2b4650d 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 1.4E-83 T 06-07-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal AM402_RS08870 b67e630c5273e83447060b65d6c92a7b 453 Gene3D G3DSA:2.40.160.60 26 453 1.9E-141 T 06-07-2017 AM402_RS08870 b67e630c5273e83447060b65d6c92a7b 453 SUPERFAMILY SSF56935 26 453 1.56E-111 T 06-07-2017 AM402_RS08870 b67e630c5273e83447060b65d6c92a7b 453 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 453 3.1E-143 T 06-07-2017 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 Gene3D G3DSA:3.40.50.720 3 254 5.3E-88 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 6.4E-67 T 06-07-2017 AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 7.7E-14 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 7.7E-14 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 7.7E-14 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.6E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.6E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.6E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.6E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.6E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS10615 4b735e0fdf361a3bd372d45c15659631 262 SUPERFAMILY SSF51735 6 254 9.04E-83 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 Pfam PF01380 SIS domain 462 590 5.1E-26 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 Pfam PF01380 SIS domain 290 418 3.5E-32 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 SUPERFAMILY SSF56235 2 234 8.58E-75 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 Gene3D G3DSA:3.40.50.10490 444 608 6.3E-66 T 06-07-2017 AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 40.77 T 06-07-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 1.5E-263 T 06-07-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 Pfam PF13522 Glutamine amidotransferase domain 64 184 2.1E-23 T 06-07-2017 AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 Gene3D G3DSA:3.40.50.10490 245 443 1.9E-62 T 06-07-2017 AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 Gene3D G3DSA:3.60.20.10 2 239 4.8E-82 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS02270 11bf1e8a91f8cda6a7577321015c7c3f 608 SUPERFAMILY SSF53697 245 608 6.03E-110 T 06-07-2017 AM402_RS19965 1fa9feeaa2857cd7a002cc55bc376963 382 Pfam PF02595 Glycerate kinase family 6 376 2.0E-148 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM402_RS19965 1fa9feeaa2857cd7a002cc55bc376963 382 Gene3D G3DSA:3.90.1510.10 45 278 1.4E-93 T 06-07-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AM402_RS19965 1fa9feeaa2857cd7a002cc55bc376963 382 SUPERFAMILY SSF110738 5 378 1.15E-138 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM402_RS19965 1fa9feeaa2857cd7a002cc55bc376963 382 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 5 378 3.5E-159 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM402_RS19965 1fa9feeaa2857cd7a002cc55bc376963 382 PIRSF PIRSF006078 4 380 3.0E-136 T 06-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 PIRSF PIRSF002888 2 338 2.2E-92 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 329 4.4E-105 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 Gene3D G3DSA:2.30.330.10 256 331 5.2E-4 T 06-07-2017 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 SUPERFAMILY SSF101801 258 331 5.23E-11 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 Pfam PF02154 Flagellar motor switch protein FliM 46 239 2.3E-74 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 Gene3D G3DSA:3.40.1550.10 77 239 4.2E-4 T 06-07-2017 IPR028976 CheC-like domain AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 SUPERFAMILY SSF103039 58 239 3.14E-19 T 06-07-2017 IPR028976 CheC-like domain AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 97 113 2.6E-29 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 221 239 2.6E-29 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.6E-29 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 122 141 2.6E-29 T 06-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM402_RS09775 c31ad0e68148ab6ac5ce25bbf6b4938e 343 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 261 329 1.8E-14 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) AM402_RS19070 af82bc07ae785c91e26ccbf1f43f1ba1 200 Gene3D G3DSA:3.30.1020.10 160 194 6.8E-13 T 06-07-2017 AM402_RS19070 af82bc07ae785c91e26ccbf1f43f1ba1 200 Pfam PF00578 AhpC/TSA family 5 139 1.6E-35 T 06-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS19070 af82bc07ae785c91e26ccbf1f43f1ba1 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 2.5E-10 T 06-07-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS19070 af82bc07ae785c91e26ccbf1f43f1ba1 200 Gene3D G3DSA:3.40.30.10 4 159 1.0E-56 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS19070 af82bc07ae785c91e26ccbf1f43f1ba1 200 PIRSF PIRSF000239 1 199 1.2E-58 T 06-07-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS19070 af82bc07ae785c91e26ccbf1f43f1ba1 200 SUPERFAMILY SSF52833 1 195 2.06E-66 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS16220 c70a6acca0f78b759e2ba9cc2a8a567c 369 SUPERFAMILY SSF52540 62 307 9.16E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16220 c70a6acca0f78b759e2ba9cc2a8a567c 369 Gene3D G3DSA:3.40.50.300 65 226 7.7E-19 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16220 c70a6acca0f78b759e2ba9cc2a8a567c 369 Pfam PF07728 AAA domain (dynein-related subfamily) 83 223 2.8E-32 T 06-07-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM402_RS20395 64d4dda609f2a87bb91454d28ef9ef9c 192 SUPERFAMILY SSF51182 56 184 3.61E-14 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS20395 64d4dda609f2a87bb91454d28ef9ef9c 192 Pfam PF07883 Cupin domain 110 172 1.4E-7 T 06-07-2017 IPR013096 Cupin 2, conserved barrel AM402_RS20395 64d4dda609f2a87bb91454d28ef9ef9c 192 SMART SM00530 16 71 2.7E-16 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS20395 64d4dda609f2a87bb91454d28ef9ef9c 192 Gene3D G3DSA:2.60.120.10 105 187 7.8E-17 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS20395 64d4dda609f2a87bb91454d28ef9ef9c 192 Pfam PF01381 Helix-turn-helix 17 71 3.5E-16 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS20395 64d4dda609f2a87bb91454d28ef9ef9c 192 Gene3D G3DSA:1.10.260.40 9 78 5.8E-23 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS20395 64d4dda609f2a87bb91454d28ef9ef9c 192 SUPERFAMILY SSF47413 10 79 1.9E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS15465 f668e2d6d0c2b71e2ec49a989c8963f6 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 06-07-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM402_RS15465 f668e2d6d0c2b71e2ec49a989c8963f6 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM402_RS15465 f668e2d6d0c2b71e2ec49a989c8963f6 760 PIRSF PIRSF000379 8 760 0.0 T 06-07-2017 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AM402_RS15465 f668e2d6d0c2b71e2ec49a989c8963f6 760 Gene3D G3DSA:3.20.70.20 5 759 0.0 T 06-07-2017 AM402_RS15465 f668e2d6d0c2b71e2ec49a989c8963f6 760 SUPERFAMILY SSF51998 5 759 2.32E-292 T 06-07-2017 AM402_RS15465 f668e2d6d0c2b71e2ec49a989c8963f6 760 Pfam PF01228 Glycine radical 630 741 4.2E-42 T 06-07-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM402_RS15465 f668e2d6d0c2b71e2ec49a989c8963f6 760 Pfam PF02901 Pyruvate formate lyase-like 25 614 3.5E-207 T 06-07-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 AM402_RS04185 9bf7f9080bed2d7df7dc1f7189b882c4 309 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 235 303 5.0E-12 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) AM402_RS04185 9bf7f9080bed2d7df7dc1f7189b882c4 309 SUPERFAMILY SSF101801 233 304 1.03E-10 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) AM402_RS04185 9bf7f9080bed2d7df7dc1f7189b882c4 309 Gene3D G3DSA:2.30.330.10 230 304 3.0E-15 T 06-07-2017 AM402_RS04185 9bf7f9080bed2d7df7dc1f7189b882c4 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 281 298 2.9E-5 T 06-07-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AM402_RS04185 9bf7f9080bed2d7df7dc1f7189b882c4 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 237 249 2.9E-5 T 06-07-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AM402_RS04185 9bf7f9080bed2d7df7dc1f7189b882c4 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 163 173 2.9E-5 T 06-07-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AM402_RS02935 bf590f0231d3f932d40f8cba0dd17edf 528 SUPERFAMILY SSF53067 265 521 3.74E-56 T 06-07-2017 AM402_RS02935 bf590f0231d3f932d40f8cba0dd17edf 528 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 255 1.3E-25 T 06-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM402_RS02935 bf590f0231d3f932d40f8cba0dd17edf 528 Gene3D G3DSA:3.30.420.40 265 521 8.5E-60 T 06-07-2017 AM402_RS02935 bf590f0231d3f932d40f8cba0dd17edf 528 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 269 474 3.1E-45 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM402_RS02935 bf590f0231d3f932d40f8cba0dd17edf 528 PIRSF PIRSF000538 3 526 4.3E-73 T 06-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM402_RS02935 bf590f0231d3f932d40f8cba0dd17edf 528 SUPERFAMILY SSF53067 5 259 8.21E-50 T 06-07-2017 AM402_RS02935 bf590f0231d3f932d40f8cba0dd17edf 528 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 6 521 1.9E-161 T 06-07-2017 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 AM402_RS02935 bf590f0231d3f932d40f8cba0dd17edf 528 Gene3D G3DSA:3.30.420.40 1 256 2.2E-57 T 06-07-2017 AM402_RS00025 0067fdd92b41e8ba0cb70f615a38edcc 873 Pfam PF13953 PapC C-terminal domain 794 854 8.5E-23 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS00025 0067fdd92b41e8ba0cb70f615a38edcc 873 SUPERFAMILY SSF141729 65 184 1.31E-27 T 06-07-2017 AM402_RS00025 0067fdd92b41e8ba0cb70f615a38edcc 873 Pfam PF00577 Outer membrane usher protein 209 783 1.2E-202 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS00025 0067fdd92b41e8ba0cb70f615a38edcc 873 Pfam PF13954 PapC N-terminal domain 40 193 3.3E-42 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS06465 49dbacb999a03ec4bf517f3d136569fe 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 4.5E-161 T 06-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM402_RS06465 49dbacb999a03ec4bf517f3d136569fe 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 4.3E-66 T 06-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM402_RS06465 49dbacb999a03ec4bf517f3d136569fe 302 PIRSF PIRSF002936 1 302 1.0E-154 T 06-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM402_RS06465 49dbacb999a03ec4bf517f3d136569fe 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 56.789 T 06-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM402_RS06465 49dbacb999a03ec4bf517f3d136569fe 302 SUPERFAMILY SSF52402 4 210 3.49E-76 T 06-07-2017 AM402_RS06465 49dbacb999a03ec4bf517f3d136569fe 302 Gene3D G3DSA:3.40.50.620 244 253 3.7E-66 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS06465 49dbacb999a03ec4bf517f3d136569fe 302 Gene3D G3DSA:3.40.50.620 2 210 3.7E-66 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS19210 a7d064502d0d8fcedf1e9255cec1e299 339 Gene3D G3DSA:3.30.1330.10 18 158 7.2E-22 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS19210 a7d064502d0d8fcedf1e9255cec1e299 339 PIRSF PIRSF005644 2 339 3.4E-119 T 06-07-2017 IPR011854 Hydrogenase expression/formation protein HypE AM402_RS19210 a7d064502d0d8fcedf1e9255cec1e299 339 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 315 5.6E-24 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS19210 a7d064502d0d8fcedf1e9255cec1e299 339 Pfam PF00586 AIR synthase related protein, N-terminal domain 56 156 4.6E-14 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS19210 a7d064502d0d8fcedf1e9255cec1e299 339 SUPERFAMILY SSF55326 6 158 3.31E-30 T 06-07-2017 AM402_RS19210 a7d064502d0d8fcedf1e9255cec1e299 339 SUPERFAMILY SSF56042 165 334 2.84E-40 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS19210 a7d064502d0d8fcedf1e9255cec1e299 339 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 7 339 4.7E-134 T 06-07-2017 IPR011854 Hydrogenase expression/formation protein HypE AM402_RS19210 a7d064502d0d8fcedf1e9255cec1e299 339 Gene3D G3DSA:3.90.650.10 165 319 1.7E-24 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 SUPERFAMILY SSF54570 3 84 1.03E-35 T 06-07-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 Gene3D G3DSA:3.30.860.10 1 91 1.4E-41 T 06-07-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 PIRSF PIRSF002144 1 92 2.2E-32 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.5E-46 T 06-07-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 06-07-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.5E-25 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.5E-25 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.5E-25 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 Pfam PF00203 Ribosomal protein S19 3 83 2.1E-37 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00985 94a97a3ef455c867980b4b860172af77 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.735 T 06-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 SUPERFAMILY SSF53335 258 373 5.68E-39 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 SUPERFAMILY SSF53335 141 217 5.68E-39 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 06-07-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 Gene3D G3DSA:3.40.50.150 147 214 9.2E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 Gene3D G3DSA:3.40.50.150 255 350 9.2E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 Gene3D G3DSA:3.40.50.150 431 700 5.4E-76 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 SMART SM00981 56 154 3.9E-19 T 06-07-2017 IPR004114 THUMP domain GO:0003723 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 701 32.546 T 06-07-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 6.1E-61 T 06-07-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 472 657 4.1E-23 T 06-07-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 Pfam PF02926 THUMP domain 23 153 7.1E-13 T 06-07-2017 IPR004114 THUMP domain GO:0003723 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 PIRSF PIRSF037618 1 702 6.2E-302 T 06-07-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS15080 3d1b15038d84d669794fa3ae79da8a59 704 SUPERFAMILY SSF53335 394 700 4.15E-70 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS03255 7ad92039112061f65bb1b6327a774219 292 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 3.7E-52 T 06-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM402_RS03255 7ad92039112061f65bb1b6327a774219 292 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 06-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM402_RS03255 7ad92039112061f65bb1b6327a774219 292 Gene3D G3DSA:3.10.290.10 6 60 1.8E-18 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS03255 7ad92039112061f65bb1b6327a774219 292 SMART SM00363 7 63 1.5E-12 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS03255 7ad92039112061f65bb1b6327a774219 292 Pfam PF01479 S4 domain 8 52 4.1E-13 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS03255 7ad92039112061f65bb1b6327a774219 292 SUPERFAMILY SSF55120 69 229 4.08E-38 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS03255 7ad92039112061f65bb1b6327a774219 292 Pfam PF00849 RNA pseudouridylate synthase 69 194 4.8E-13 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS03255 7ad92039112061f65bb1b6327a774219 292 SUPERFAMILY SSF55174 4 84 1.19E-12 T 06-07-2017 AM402_RS08710 4705244cbadf560951be87c9557b0d1a 293 Gene3D G3DSA:3.40.50.1100 3 39 4.3E-79 T 06-07-2017 AM402_RS08710 4705244cbadf560951be87c9557b0d1a 293 Gene3D G3DSA:3.40.50.1100 146 292 4.3E-79 T 06-07-2017 AM402_RS08710 4705244cbadf560951be87c9557b0d1a 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 2.8E-124 T 06-07-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM402_RS08710 4705244cbadf560951be87c9557b0d1a 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 06-07-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM402_RS08710 4705244cbadf560951be87c9557b0d1a 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 4 292 2.2E-153 T 06-07-2017 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM402_RS08710 4705244cbadf560951be87c9557b0d1a 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 1.9E-70 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS08710 4705244cbadf560951be87c9557b0d1a 293 Gene3D G3DSA:3.40.50.1100 40 140 4.6E-38 T 06-07-2017 AM402_RS08710 4705244cbadf560951be87c9557b0d1a 293 SUPERFAMILY SSF53686 5 290 3.4E-92 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 06-07-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 SUPERFAMILY SSF52540 2 638 3.49E-166 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Gene3D G3DSA:1.10.486.10 383 527 4.0E-40 T 06-07-2017 AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 40.535 T 06-07-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Gene3D G3DSA:1.10.10.160 108 181 2.2E-22 T 06-07-2017 IPR013986 DExx box DNA helicase domain AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Gene3D G3DSA:3.40.50.300 280 382 1.1E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Gene3D G3DSA:3.40.50.300 550 640 1.1E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 3.3E-76 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Gene3D G3DSA:3.40.50.300 2 104 1.9E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Gene3D G3DSA:3.40.50.300 182 279 1.9E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00705 5b0e7b339fbbd202b219c3174421eb15 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 6.9E-73 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM402_RS12670 1831c78924c3410734c2cc762130123e 483 Pfam PF01048 Phosphorylase superfamily 268 430 3.0E-17 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS12670 1831c78924c3410734c2cc762130123e 483 Gene3D G3DSA:3.30.1730.10 8 166 6.2E-56 T 06-07-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM402_RS12670 1831c78924c3410734c2cc762130123e 483 Gene3D G3DSA:3.40.50.1580 173 465 4.7E-110 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS12670 1831c78924c3410734c2cc762130123e 483 SUPERFAMILY SSF53167 9 483 1.13E-152 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS12670 1831c78924c3410734c2cc762130123e 483 Hamap MF_01932 AMP nucleosidase [amn]. 2 483 55.966 T 06-07-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM402_RS12670 1831c78924c3410734c2cc762130123e 483 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 11 483 9.6E-219 T 06-07-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM402_RS12670 1831c78924c3410734c2cc762130123e 483 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 164 5.7E-49 T 06-07-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 SMART SM01061 3 61 1.1E-22 T 06-07-2017 IPR004341 CAT RNA-binding domain GO:0003723 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 SUPERFAMILY SSF63520 59 169 4.19E-28 T 06-07-2017 IPR011608 PRD domain GO:0006355 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 Gene3D G3DSA:1.10.1790.10 67 167 6.1E-29 T 06-07-2017 IPR011608 PRD domain GO:0006355 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 Gene3D G3DSA:1.10.1790.10 172 280 1.9E-28 T 06-07-2017 IPR011608 PRD domain GO:0006355 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 Pfam PF00874 PRD domain 183 275 2.9E-15 T 06-07-2017 IPR011608 PRD domain GO:0006355 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 Pfam PF00874 PRD domain 78 164 5.3E-21 T 06-07-2017 IPR011608 PRD domain GO:0006355 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 SUPERFAMILY SSF63520 174 276 8.5E-22 T 06-07-2017 IPR011608 PRD domain GO:0006355 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 SUPERFAMILY SSF50151 3 55 2.49E-15 T 06-07-2017 IPR004341 CAT RNA-binding domain GO:0003723 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 Gene3D G3DSA:2.30.24.10 3 55 1.3E-20 T 06-07-2017 IPR004341 CAT RNA-binding domain GO:0003723 AM402_RS06530 0e19df3c143a87c500677a956699a76b 286 Pfam PF03123 CAT RNA binding domain 3 55 1.4E-20 T 06-07-2017 IPR004341 CAT RNA-binding domain GO:0003723 AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 Pfam PF03466 LysR substrate binding domain 91 287 4.3E-41 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 Gene3D G3DSA:3.40.190.10 180 263 3.6E-28 T 06-07-2017 AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 SUPERFAMILY SSF53850 91 322 5.7E-42 T 06-07-2017 AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 Gene3D G3DSA:3.40.190.10 91 179 1.6E-19 T 06-07-2017 AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 Gene3D G3DSA:1.10.10.10 1 82 3.1E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 SUPERFAMILY SSF46785 2 113 2.21E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 3.4E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.0E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.0E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12095 94a5d5af4533dc6845e3091b0edf479c 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.0E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 Pfam PF00005 ABC transporter 358 508 6.3E-37 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 SUPERFAMILY SSF52540 331 579 2.01E-95 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 580 1.3E-255 T 06-07-2017 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 SUPERFAMILY SSF90123 13 326 2.88E-72 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 Gene3D G3DSA:3.40.50.300 341 573 6.8E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 SMART SM00382 367 554 2.8E-19 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 Gene3D G3DSA:1.20.1560.10 12 324 3.3E-69 T 06-07-2017 AM402_RS15405 33dfb02725dfc3430e728249ed666d00 581 Pfam PF00664 ABC transporter transmembrane region 29 296 2.3E-59 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.4E-47 T 06-07-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 8.8E-136 T 06-07-2017 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 PIRSF PIRSF000102 1 311 3.1E-63 T 06-07-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 Gene3D G3DSA:3.90.110.10 147 311 1.0E-64 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 06-07-2017 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 Gene3D G3DSA:3.40.50.720 1 146 2.2E-58 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 4.4E-52 T 06-07-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 58.262 T 06-07-2017 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 SUPERFAMILY SSF56327 146 310 1.41E-43 T 06-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM402_RS00230 da8732ba433f07159f7ed087a327c797 312 SUPERFAMILY SSF51735 1 145 5.29E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS11325 df822a3548081b2711bc3018aaf81bd6 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 389 3.4E-102 T 06-07-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM402_RS11325 df822a3548081b2711bc3018aaf81bd6 405 Gene3D G3DSA:1.20.1250.20 219 392 4.3E-12 T 06-07-2017 AM402_RS11325 df822a3548081b2711bc3018aaf81bd6 405 Gene3D G3DSA:1.20.1250.20 19 192 1.1E-26 T 06-07-2017 AM402_RS11325 df822a3548081b2711bc3018aaf81bd6 405 Pfam PF07690 Major Facilitator Superfamily 19 350 1.2E-38 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS11325 df822a3548081b2711bc3018aaf81bd6 405 SUPERFAMILY SSF103473 10 393 7.59E-59 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 5.4E-22 T 06-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 PIRSF PIRSF001438 1 312 4.7E-123 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 Gene3D G3DSA:3.30.160.40 221 304 2.2E-28 T 06-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 Gene3D G3DSA:3.40.190.10 111 199 1.0E-40 T 06-07-2017 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 SUPERFAMILY SSF54782 220 308 3.27E-29 T 06-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 06-07-2017 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 SUPERFAMILY SSF53850 4 218 1.09E-83 T 06-07-2017 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 Gene3D G3DSA:3.40.190.10 2 110 6.9E-47 T 06-07-2017 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.171 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 3.0E-78 T 06-07-2017 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.1E-111 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.5E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.5E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.5E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.5E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00580 8244069426dfd72ca5d9c8df090167d9 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.5E-49 T 06-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 608 3.1E-225 T 06-07-2017 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 2.9E-54 T 06-07-2017 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 2.9E-54 T 06-07-2017 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 2.9E-54 T 06-07-2017 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 2.9E-54 T 06-07-2017 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 2.9E-54 T 06-07-2017 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 2.9E-54 T 06-07-2017 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 2.9E-54 T 06-07-2017 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 Pfam PF00361 Proton-conducting membrane transporter 133 425 1.0E-93 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 4.1E-23 T 06-07-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.0E-9 T 06-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.0E-9 T 06-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 1.0E-9 T 06-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM402_RS09165 f098308362c12c76ba76905aa0ead5bb 611 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 1.0E-9 T 06-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM402_RS19735 394aaf3bf1407ba90585159a61a5904f 328 PIRSF PIRSF004692 1 328 1.4E-132 T 06-07-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM402_RS19735 394aaf3bf1407ba90585159a61a5904f 328 Gene3D G3DSA:3.10.580.10 195 325 3.0E-37 T 06-07-2017 AM402_RS19735 394aaf3bf1407ba90585159a61a5904f 328 SUPERFAMILY SSF53697 12 325 3.34E-66 T 06-07-2017 AM402_RS19735 394aaf3bf1407ba90585159a61a5904f 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 318 6.8E-121 T 06-07-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM402_RS19735 394aaf3bf1407ba90585159a61a5904f 328 Pfam PF01380 SIS domain 44 175 1.2E-32 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS19735 394aaf3bf1407ba90585159a61a5904f 328 Pfam PF00571 CBS domain 204 259 4.1E-5 T 06-07-2017 IPR000644 CBS domain AM402_RS19735 394aaf3bf1407ba90585159a61a5904f 328 Pfam PF00571 CBS domain 271 325 9.4E-7 T 06-07-2017 IPR000644 CBS domain AM402_RS19735 394aaf3bf1407ba90585159a61a5904f 328 Gene3D G3DSA:3.40.50.10490 15 194 2.3E-50 T 06-07-2017 AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 SUPERFAMILY SSF52151 190 307 4.97E-83 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 SUPERFAMILY SSF52151 4 122 4.97E-83 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 Gene3D G3DSA:3.40.366.10 4 122 1.6E-74 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 Gene3D G3DSA:3.40.366.10 197 302 1.6E-74 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.0E-41 T 06-07-2017 IPR020801 Polyketide synthase, acyl transferase domain AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 SUPERFAMILY SSF55048 128 197 4.97E-18 T 06-07-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 PIRSF PIRSF000446 1 309 1.0E-140 T 06-07-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.1E-131 T 06-07-2017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 Pfam PF00698 Acyl transferase domain 7 292 1.3E-39 T 06-07-2017 IPR014043 Acyl transferase AM402_RS14400 ea1c0e3be61b1555ac4a569a3a2c3ea8 310 Gene3D G3DSA:3.30.70.250 125 196 2.5E-31 T 06-07-2017 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 Gene3D G3DSA:3.30.565.10 621 783 1.3E-29 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 SUPERFAMILY SSF158472 348 397 3.01E-5 T 06-07-2017 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 PIRSF PIRSF037119 4 789 1.9E-223 T 06-07-2017 IPR017116 Signal transduction histidine kinase, PgtB AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 746 9.6E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 765 9.6E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 732 9.6E-6 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 SUPERFAMILY SSF55785 415 520 7.75E-6 T 06-07-2017 IPR000014 PAS domain AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 SMART SM00387 678 787 3.0E-20 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 Gene3D G3DSA:1.10.287.130 568 620 9.9E-6 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 Gene3D G3DSA:3.30.450.20 406 511 2.1E-6 T 06-07-2017 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 SMART SM00304 348 400 7.9E-6 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 SUPERFAMILY SSF55874 634 783 7.47E-30 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 SUPERFAMILY SSF47384 563 634 1.14E-9 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 Pfam PF00672 HAMP domain 327 393 1.6E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 679 783 6.4E-15 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS05645 3d547dfae077ed8ed72fa04269cf47a6 791 Pfam PF00512 His Kinase A (phospho-acceptor) domain 569 633 1.0E-6 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.9E-37 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 06-07-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 PIRSF PIRSF000171 1 575 7.3E-42 T 06-07-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 SUPERFAMILY SSF46977 444 586 3.4E-45 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 06-07-2017 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 SUPERFAMILY SSF51905 3 250 1.14E-70 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 SUPERFAMILY SSF51905 361 422 1.14E-70 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 SUPERFAMILY SSF56425 227 358 5.83E-42 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 Gene3D G3DSA:1.20.58.100 427 537 1.2E-37 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.8E-5 T 06-07-2017 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.8E-5 T 06-07-2017 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.7E-244 T 06-07-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.1E-10 T 06-07-2017 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.1E-10 T 06-07-2017 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 Gene3D G3DSA:3.50.50.60 3 233 7.1E-106 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 Gene3D G3DSA:3.50.50.60 353 417 7.1E-106 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 Gene3D G3DSA:3.90.700.10 234 352 1.8E-36 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 Gene3D G3DSA:4.10.80.40 543 577 8.9E-18 T 06-07-2017 AM402_RS20085 3497af5d905d5f776d242d9078a15107 598 Pfam PF00890 FAD binding domain 7 397 6.4E-114 T 06-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS12250 be9cff14c2a69c505d27cf8722233e12 78 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 23 77 1.0E-13 T 06-07-2017 IPR010595 Protein of unknown function DUF1161 AM402_RS12250 be9cff14c2a69c505d27cf8722233e12 78 Pfam PF06649 Protein of unknown function (DUF1161) 24 77 2.1E-24 T 06-07-2017 IPR010595 Protein of unknown function DUF1161 AM402_RS05940 e877a6abff1ece8824a831be572e5d1b 209 Gene3D G3DSA:3.90.79.10 12 202 5.5E-56 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS05940 e877a6abff1ece8824a831be572e5d1b 209 SUPERFAMILY SSF55811 7 206 1.27E-49 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS05940 e877a6abff1ece8824a831be572e5d1b 209 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM402_RS05940 e877a6abff1ece8824a831be572e5d1b 209 Pfam PF00293 NUDIX domain 58 180 5.7E-14 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS05940 e877a6abff1ece8824a831be572e5d1b 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 4.1E-74 T 06-07-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM402_RS00910 1a7554e2cfb0813b67f79cdb7e50c336 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.298 T 06-07-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AM402_RS00910 1a7554e2cfb0813b67f79cdb7e50c336 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 06-07-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00910 1a7554e2cfb0813b67f79cdb7e50c336 144 SUPERFAMILY SSF52080 4 143 2.62E-46 T 06-07-2017 IPR021131 Ribosomal protein L18e/L15P AM402_RS00910 1a7554e2cfb0813b67f79cdb7e50c336 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.5E-50 T 06-07-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00910 1a7554e2cfb0813b67f79cdb7e50c336 144 Gene3D G3DSA:3.100.10.10 32 143 5.6E-25 T 06-07-2017 AM402_RS00910 1a7554e2cfb0813b67f79cdb7e50c336 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.8E-31 T 06-07-2017 IPR021131 Ribosomal protein L18e/L15P AM402_RS06825 a5923d90c2df7184ffee947ba86cfca6 209 SUPERFAMILY SSF52266 29 206 2.26E-47 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS06825 a5923d90c2df7184ffee947ba86cfca6 209 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 191 3.8E-22 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS06825 a5923d90c2df7184ffee947ba86cfca6 209 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 30 40 - T 06-07-2017 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AM402_RS06825 a5923d90c2df7184ffee947ba86cfca6 209 Gene3D G3DSA:3.40.50.1110 29 207 5.6E-54 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS13670 3778286f64cb0c1c20ae7c2c66586682 124 Pfam PF01638 HxlR-like helix-turn-helix 29 115 1.8E-31 T 06-07-2017 IPR002577 Helix-turn-helix, HxlR type AM402_RS13670 3778286f64cb0c1c20ae7c2c66586682 124 SUPERFAMILY SSF46785 14 121 2.17E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS13670 3778286f64cb0c1c20ae7c2c66586682 124 Gene3D G3DSA:1.10.10.10 4 119 8.4E-43 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS10885 d7781fabf2e36dad42c2d2644d2986e6 198 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.0 T 06-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 AM402_RS10885 d7781fabf2e36dad42c2d2644d2986e6 198 Gene3D G3DSA:3.30.60.20 142 190 4.8E-18 T 06-07-2017 AM402_RS10885 d7781fabf2e36dad42c2d2644d2986e6 198 SUPERFAMILY SSF57716 142 192 2.9E-15 T 06-07-2017 AM402_RS10885 d7781fabf2e36dad42c2d2644d2986e6 198 SUPERFAMILY SSF52540 1 141 1.0E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10885 d7781fabf2e36dad42c2d2644d2986e6 198 PIRSF PIRSF035805 1 197 4.5E-59 T 06-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 AM402_RS10885 d7781fabf2e36dad42c2d2644d2986e6 198 Pfam PF00265 Thymidine kinase 2 186 5.6E-60 T 06-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 AM402_RS10885 d7781fabf2e36dad42c2d2644d2986e6 198 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 06-07-2017 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 AM402_RS18735 6641074c5b97fcf05ce0c80c4dae9755 201 Pfam PF13662 Toprim domain 82 172 5.7E-23 T 06-07-2017 IPR006171 Toprim domain AM402_RS18735 6641074c5b97fcf05ce0c80c4dae9755 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 06-07-2017 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AM402_RS18735 6641074c5b97fcf05ce0c80c4dae9755 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.446 T 06-07-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM402_RS18735 6641074c5b97fcf05ce0c80c4dae9755 201 SMART SM00493 81 166 1.7E-17 T 06-07-2017 IPR006171 Toprim domain AM402_RS18735 6641074c5b97fcf05ce0c80c4dae9755 201 SUPERFAMILY SSF111304 2 199 2.22E-70 T 06-07-2017 IPR023627 Recombination protein RecR AM402_RS18735 6641074c5b97fcf05ce0c80c4dae9755 201 Pfam PF02132 RecR protein 41 77 3.4E-12 T 06-07-2017 IPR023628 Recombination protein RecR, C4-type zinc finger AM402_RS18735 6641074c5b97fcf05ce0c80c4dae9755 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.1E-80 T 06-07-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM402_RS17995 4036ef483068fe6a68a99cf6bc7c938d 834 Pfam PF00577 Outer membrane usher protein 192 746 1.8E-149 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS17995 4036ef483068fe6a68a99cf6bc7c938d 834 Pfam PF13954 PapC N-terminal domain 28 175 1.2E-33 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS17995 4036ef483068fe6a68a99cf6bc7c938d 834 Pfam PF13953 PapC C-terminal domain 757 814 2.1E-13 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS17995 4036ef483068fe6a68a99cf6bc7c938d 834 SUPERFAMILY SSF141729 27 151 7.46E-22 T 06-07-2017 AM402_RS15865 b03546c4215075b10c05bcf86be7de57 147 Pfam PF00583 Acetyltransferase (GNAT) family 51 129 1.6E-10 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS15865 b03546c4215075b10c05bcf86be7de57 147 Gene3D G3DSA:3.40.630.30 1 133 2.3E-17 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS15865 b03546c4215075b10c05bcf86be7de57 147 SUPERFAMILY SSF55729 1 133 3.6E-18 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS05900 9d418ce3680d13de526dfdb0a649c4b9 317 Gene3D G3DSA:3.30.70.270 110 226 1.0E-6 T 06-07-2017 AM402_RS05900 9d418ce3680d13de526dfdb0a649c4b9 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 142 155 4.3E-10 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS05900 9d418ce3680d13de526dfdb0a649c4b9 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 38 50 4.3E-10 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS05900 9d418ce3680d13de526dfdb0a649c4b9 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 175 186 4.3E-10 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS05900 9d418ce3680d13de526dfdb0a649c4b9 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 86 104 4.3E-10 T 06-07-2017 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 AM402_RS05900 9d418ce3680d13de526dfdb0a649c4b9 317 SUPERFAMILY SSF56672 64 251 1.06E-8 T 06-07-2017 AM402_RS05900 9d418ce3680d13de526dfdb0a649c4b9 317 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 65 234 1.8E-16 T 06-07-2017 IPR000477 Reverse transcriptase domain AM402_RS18915 6fbf039ce73ba5d22a808392e2da4cd6 203 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 203 5.8E-87 T 06-07-2017 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AM402_RS18915 6fbf039ce73ba5d22a808392e2da4cd6 203 Pfam PF00510 Cytochrome c oxidase subunit III 14 201 2.4E-15 T 06-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18915 6fbf039ce73ba5d22a808392e2da4cd6 203 SUPERFAMILY SSF81452 10 201 1.01E-58 T 06-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS18915 6fbf039ce73ba5d22a808392e2da4cd6 203 Gene3D G3DSA:1.20.120.80 24 201 7.2E-51 T 06-07-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 Gene3D G3DSA:1.20.1270.20 159 231 6.9E-25 T 06-07-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 PIRSF PIRSF000076 1 550 9.2E-240 T 06-07-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 Gene3D G3DSA:1.20.1270.20 1 158 8.3E-37 T 06-07-2017 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 1.3E-240 T 06-07-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.789 T 06-07-2017 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 5.2E-161 T 06-07-2017 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 Gene3D G3DSA:3.40.50.2030 380 547 1.5E-69 T 06-07-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 SUPERFAMILY SSF56821 1 549 3.53E-191 T 06-07-2017 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 AM402_RS07250 fee88f509a4c25e002a8cfb7e77a140d 550 Gene3D G3DSA:3.40.50.2030 234 379 5.3E-67 T 06-07-2017 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AM402_RS03060 d3c0dba2c1077d2ba5217f58ab8a85bb 182 SUPERFAMILY SSF55729 6 176 3.42E-49 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS03060 d3c0dba2c1077d2ba5217f58ab8a85bb 182 Gene3D G3DSA:3.40.630.30 5 176 5.3E-51 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS03060 d3c0dba2c1077d2ba5217f58ab8a85bb 182 Pfam PF13302 Acetyltransferase (GNAT) domain 12 152 4.6E-32 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 SUPERFAMILY SSF51182 22 173 9.71E-14 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 SMART SM00342 170 252 4.7E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 SUPERFAMILY SSF46689 217 254 1.12E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 Pfam PF12833 Helix-turn-helix domain 176 253 3.4E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 Gene3D G3DSA:1.10.10.60 163 206 5.8E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 Gene3D G3DSA:2.60.120.10 22 84 7.9E-8 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 SUPERFAMILY SSF46689 174 205 8.51E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 8.4E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 8.4E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 Gene3D G3DSA:1.10.10.60 217 252 9.1E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02825 12213b5fc2c54ac8822ba705e03fce5c 256 Pfam PF02311 AraC-like ligand binding domain 25 109 1.9E-5 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM402_RS04490 0df0580d7f43b9ae9db67c84a67be903 450 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 444 2.2E-151 T 06-07-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM402_RS04490 0df0580d7f43b9ae9db67c84a67be903 450 Gene3D G3DSA:1.10.860.10 15 114 1.3E-35 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM402_RS04490 0df0580d7f43b9ae9db67c84a67be903 450 SUPERFAMILY SSF48024 13 121 3.4E-34 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS04490 0df0580d7f43b9ae9db67c84a67be903 450 SMART SM00382 204 403 1.4E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS04490 0df0580d7f43b9ae9db67c84a67be903 450 SUPERFAMILY SSF52540 185 435 1.73E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04490 0df0580d7f43b9ae9db67c84a67be903 450 Pfam PF03796 DnaB-like helicase C terminal domain 187 443 4.6E-102 T 06-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM402_RS04490 0df0580d7f43b9ae9db67c84a67be903 450 Pfam PF00772 DnaB-like helicase N terminal domain 14 113 4.7E-33 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS04490 0df0580d7f43b9ae9db67c84a67be903 450 Gene3D G3DSA:3.40.50.300 177 444 1.3E-95 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 534 654 5.0E-46 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 Pfam PF00367 phosphotransferase system, EIIB 425 458 2.6E-13 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 Pfam PF02378 Phosphotransferase system, EIIC 12 322 2.2E-77 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 SUPERFAMILY SSF51261 532 678 9.42E-51 T 06-07-2017 IPR011055 Duplicated hybrid motif AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 Gene3D G3DSA:3.30.1360.60 420 497 3.6E-25 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 494 5.3E-203 T 06-07-2017 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 Gene3D G3DSA:2.70.70.10 532 677 2.1E-55 T 06-07-2017 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 483 3.8E-22 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 SUPERFAMILY SSF55604 424 496 7.59E-19 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 436 453 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 596 608 - T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM402_RS16655 edeaabbbdeaeb9902347c73b89e5493d 681 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 533 657 3.5E-46 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM402_RS06055 7982d0031fee318d793f446deb354d58 176 SUPERFAMILY SSF55811 6 153 2.71E-33 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS06055 7982d0031fee318d793f446deb354d58 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.4E-7 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS06055 7982d0031fee318d793f446deb354d58 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.4E-7 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS06055 7982d0031fee318d793f446deb354d58 176 Pfam PF00293 NUDIX domain 7 146 4.6E-29 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS06055 7982d0031fee318d793f446deb354d58 176 Gene3D G3DSA:3.90.79.10 3 151 3.3E-34 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS06055 7982d0031fee318d793f446deb354d58 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.396 T 06-07-2017 IPR022927 RNA pyrophosphohydrolase RppH AM402_RS06055 7982d0031fee318d793f446deb354d58 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 73 92 5.0E-20 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 203 213 5.0E-20 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 22 38 5.0E-20 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 151 172 5.0E-20 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 Gene3D G3DSA:1.10.240.10 212 304 2.9E-35 T 06-07-2017 AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 Gene3D G3DSA:3.40.50.620 8 211 5.9E-63 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 Pfam PF00579 tRNA synthetases class I (W and Y) 7 292 3.7E-48 T 06-07-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 SUPERFAMILY SSF52374 11 336 3.62E-71 T 06-07-2017 AM402_RS09305 0c8e4a9982d8e9dfd3c8a6ecd95a954e 339 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 9 336 1.1E-67 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS11020 5e6ca573b7a227e2542ec062563e9da8 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM402_RS11020 5e6ca573b7a227e2542ec062563e9da8 491 Pfam PF00171 Aldehyde dehydrogenase family 24 480 6.9E-174 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM402_RS11020 5e6ca573b7a227e2542ec062563e9da8 491 Gene3D G3DSA:3.40.605.10 7 266 5.8E-101 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM402_RS11020 5e6ca573b7a227e2542ec062563e9da8 491 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 478 7.8E-223 T 06-07-2017 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM402_RS11020 5e6ca573b7a227e2542ec062563e9da8 491 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 491 56.802 T 06-07-2017 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM402_RS11020 5e6ca573b7a227e2542ec062563e9da8 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM402_RS11020 5e6ca573b7a227e2542ec062563e9da8 491 Gene3D G3DSA:3.40.309.10 267 453 1.0E-66 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS11020 5e6ca573b7a227e2542ec062563e9da8 491 SUPERFAMILY SSF53720 6 485 1.96E-165 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS17715 ac3e3e0e77c5e4f17343d3d6b9b5f5e8 549 SUPERFAMILY SSF110849 37 138 1.41E-8 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS17715 ac3e3e0e77c5e4f17343d3d6b9b5f5e8 549 Gene3D G3DSA:3.90.1530.10 39 105 4.0E-6 T 06-07-2017 AM402_RS17715 ac3e3e0e77c5e4f17343d3d6b9b5f5e8 549 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 29 292 1.3E-102 T 06-07-2017 IPR022304 Integrating conjugative element, PFGI-1, ParB AM402_RS10745 e95af618d45c0f5c3c98e2d3745ef159 514 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 512 7.3E-275 T 06-07-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM402_RS10745 e95af618d45c0f5c3c98e2d3745ef159 514 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 1.4E-273 T 06-07-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM402_RS10745 e95af618d45c0f5c3c98e2d3745ef159 514 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 514 355.07 T 06-07-2017 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM402_RS06650 9f913fe348ea6939e601185ed8e7df76 225 Pfam PF00857 Isochorismatase family 20 172 2.2E-20 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS06650 9f913fe348ea6939e601185ed8e7df76 225 SUPERFAMILY SSF52499 12 209 3.79E-46 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS06650 9f913fe348ea6939e601185ed8e7df76 225 Gene3D G3DSA:3.40.50.850 13 212 1.1E-43 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS10840 aa0860e7bae1008762e0fd53169fccc2 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.1E-26 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS10840 aa0860e7bae1008762e0fd53169fccc2 268 Gene3D G3DSA:3.60.10.10 1 267 1.3E-86 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS10840 aa0860e7bae1008762e0fd53169fccc2 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 06-07-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AM402_RS10840 aa0860e7bae1008762e0fd53169fccc2 268 SUPERFAMILY SSF56219 1 268 1.44E-87 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS10840 aa0860e7bae1008762e0fd53169fccc2 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 06-07-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AM402_RS10840 aa0860e7bae1008762e0fd53169fccc2 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 5.3E-101 T 06-07-2017 AM402_RS10840 aa0860e7bae1008762e0fd53169fccc2 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 7.7E-89 T 06-07-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AM402_RS19085 176a1da7009878f225e4200b744de6d5 700 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 204 1.7E-67 T 06-07-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM402_RS19085 176a1da7009878f225e4200b744de6d5 700 SMART SM00790 5 206 9.2E-86 T 06-07-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM402_RS19085 176a1da7009878f225e4200b744de6d5 700 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 228 685 1.4E-67 T 06-07-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM402_RS19085 176a1da7009878f225e4200b744de6d5 700 Gene3D G3DSA:1.10.569.10 297 442 1.4E-5 T 06-07-2017 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 AM402_RS19085 176a1da7009878f225e4200b744de6d5 700 SUPERFAMILY SSF56228 3 210 9.55E-62 T 06-07-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM402_RS19085 176a1da7009878f225e4200b744de6d5 700 Gene3D G3DSA:1.10.599.10 443 688 2.7E-60 T 06-07-2017 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 AM402_RS19085 176a1da7009878f225e4200b744de6d5 700 Gene3D G3DSA:3.60.9.10 4 209 6.4E-80 T 06-07-2017 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM402_RS19085 176a1da7009878f225e4200b744de6d5 700 SUPERFAMILY SSF48310 212 699 5.49E-67 T 06-07-2017 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 AM402_RS04695 de951322a5dbd46f5e8e1d8fc5df9960 437 Gene3D G3DSA:1.20.1250.20 246 422 1.7E-6 T 06-07-2017 AM402_RS04695 de951322a5dbd46f5e8e1d8fc5df9960 437 Gene3D G3DSA:1.20.1250.20 25 219 1.2E-5 T 06-07-2017 AM402_RS04695 de951322a5dbd46f5e8e1d8fc5df9960 437 Pfam PF07690 Major Facilitator Superfamily 34 356 2.0E-8 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS04695 de951322a5dbd46f5e8e1d8fc5df9960 437 SUPERFAMILY SSF103473 24 425 9.42E-27 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 SUPERFAMILY SSF49584 154 245 1.96E-22 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 103 120 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 Gene3D G3DSA:2.60.40.360 27 145 8.3E-43 T 06-07-2017 IPR008962 PapD-like AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 Gene3D G3DSA:2.60.40.1070 154 244 1.5E-26 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 232 3.8E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 PRINTS PR00969 Pili chaperone signature 127 142 9.6E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 PRINTS PR00969 Pili chaperone signature 104 121 9.6E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 PRINTS PR00969 Pili chaperone signature 28 37 9.6E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 PRINTS PR00969 Pili chaperone signature 74 95 9.6E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 PRINTS PR00969 Pili chaperone signature 164 179 9.6E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 145 1.1E-37 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS08460 f43d0c90018c29a6394d857458f3f75a 254 SUPERFAMILY SSF49354 27 145 4.19E-38 T 06-07-2017 IPR008962 PapD-like AM402_RS11190 48ea7456b423e97fb2574f3425844b72 680 Pfam PF00593 TonB dependent receptor 427 678 3.3E-25 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS11190 48ea7456b423e97fb2574f3425844b72 680 Gene3D G3DSA:2.40.170.20 160 679 1.0E-74 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS11190 48ea7456b423e97fb2574f3425844b72 680 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 44 680 1.2E-115 T 06-07-2017 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM402_RS11190 48ea7456b423e97fb2574f3425844b72 680 Gene3D G3DSA:2.170.130.10 44 159 7.3E-31 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS11190 48ea7456b423e97fb2574f3425844b72 680 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 42 680 9.7E-151 T 06-07-2017 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM402_RS11190 48ea7456b423e97fb2574f3425844b72 680 SUPERFAMILY SSF56935 44 680 7.69E-95 T 06-07-2017 AM402_RS11190 48ea7456b423e97fb2574f3425844b72 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 9.0E-22 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS14310 d7de70be3856f04a792c8098d92cb74a 400 Pfam PF02687 FtsX-like permease family 271 393 3.4E-16 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AM402_RS14310 d7de70be3856f04a792c8098d92cb74a 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 4.4E-16 T 06-07-2017 IPR025857 MacB-like periplasmic core domain AM402_RS14310 d7de70be3856f04a792c8098d92cb74a 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 400 5.7E-134 T 06-07-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM402_RS18215 3d7f6eaeadc43d7306f181f94e6353e9 305 SUPERFAMILY SSF56281 1 305 1.02E-85 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18215 3d7f6eaeadc43d7306f181f94e6353e9 305 Gene3D G3DSA:3.60.15.10 3 305 1.0E-86 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18215 3d7f6eaeadc43d7306f181f94e6353e9 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 1.5E-113 T 06-07-2017 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AM402_RS18215 3d7f6eaeadc43d7306f181f94e6353e9 305 Pfam PF00753 Metallo-beta-lactamase superfamily 19 80 4.2E-8 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18215 3d7f6eaeadc43d7306f181f94e6353e9 305 Pfam PF12706 Beta-lactamase superfamily domain 198 271 3.7E-8 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18215 3d7f6eaeadc43d7306f181f94e6353e9 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 40.535 T 06-07-2017 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AM402_RS02120 6571a364029871ac1f7201c188489400 224 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 134 6.5E-18 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS02120 6571a364029871ac1f7201c188489400 224 Gene3D G3DSA:2.60.40.360 22 134 2.4E-15 T 06-07-2017 IPR008962 PapD-like AM402_RS02120 6571a364029871ac1f7201c188489400 224 SUPERFAMILY SSF49354 16 134 5.0E-19 T 06-07-2017 IPR008962 PapD-like AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 2.0E-30 T 06-07-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Pfam PF00204 DNA gyrase B 221 390 2.9E-58 T 06-07-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 106.389 T 06-07-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Gene3D G3DSA:3.40.50.670 404 550 3.1E-99 T 06-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Gene3D G3DSA:3.40.50.670 718 786 3.1E-99 T 06-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 06-07-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 06-07-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Gene3D G3DSA:3.30.230.10 220 392 2.5E-77 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 SMART SM00433 35 797 9.2E-277 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Pfam PF01751 Toprim domain 419 531 1.4E-17 T 06-07-2017 IPR006171 Toprim domain AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 SMART SM00387 31 175 7.2E-31 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 2.6E-78 T 06-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 SUPERFAMILY SSF54211 221 392 1.67E-61 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 SUPERFAMILY SSF55874 4 220 4.85E-76 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 2.5E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.8E-70 T 06-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 SUPERFAMILY SSF56719 730 795 3.66E-86 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 SUPERFAMILY SSF56719 394 560 3.66E-86 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM402_RS01880 4bb3def2cbbb46f1568a9d82580a8db8 804 Gene3D G3DSA:3.30.565.10 15 218 8.8E-91 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS03470 6f10277cdbec8c75ef2b3ec2a2101607 331 SUPERFAMILY SSF56112 7 328 6.56E-77 T 06-07-2017 IPR011009 Protein kinase-like domain AM402_RS03470 6f10277cdbec8c75ef2b3ec2a2101607 331 Pfam PF01636 Phosphotransferase enzyme family 33 259 9.5E-35 T 06-07-2017 IPR002575 Aminoglycoside phosphotransferase AM402_RS03470 6f10277cdbec8c75ef2b3ec2a2101607 331 Gene3D G3DSA:3.90.1200.10 109 327 4.2E-42 T 06-07-2017 AM402_RS03470 6f10277cdbec8c75ef2b3ec2a2101607 331 Hamap MF_01497 Stress response kinase A [srkA]. 5 321 43.96 T 06-07-2017 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 AM402_RS17390 5a907af1c871bcc75dd226a8e0653d92 90 Gene3D G3DSA:1.10.3880.10 1 90 3.0E-42 T 06-07-2017 AM402_RS17390 5a907af1c871bcc75dd226a8e0653d92 90 SUPERFAMILY SSF111148 1 89 2.09E-39 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM402_RS17390 5a907af1c871bcc75dd226a8e0653d92 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 6.9E-40 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM402_RS17390 5a907af1c871bcc75dd226a8e0653d92 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 4.0E-34 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM402_RS17390 5a907af1c871bcc75dd226a8e0653d92 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.04 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM402_RS17390 5a907af1c871bcc75dd226a8e0653d92 90 PIRSF PIRSF029827 1 90 4.6E-43 T 06-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM402_RS00330 4b9e9cad23a3eb3726f04f03971a69c4 82 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.1E-18 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00330 4b9e9cad23a3eb3726f04f03971a69c4 82 Pfam PF01197 Ribosomal protein L31 1 78 3.0E-26 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00330 4b9e9cad23a3eb3726f04f03971a69c4 82 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00330 4b9e9cad23a3eb3726f04f03971a69c4 82 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.796 T 06-07-2017 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00330 4b9e9cad23a3eb3726f04f03971a69c4 82 SUPERFAMILY SSF143800 1 80 7.46E-23 T 06-07-2017 AM402_RS00330 4b9e9cad23a3eb3726f04f03971a69c4 82 PRINTS PR01249 Ribosomal protein L31 signature 59 77 4.1E-16 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00330 4b9e9cad23a3eb3726f04f03971a69c4 82 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.1E-16 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00330 4b9e9cad23a3eb3726f04f03971a69c4 82 PRINTS PR01249 Ribosomal protein L31 signature 44 59 4.1E-16 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS12420 1b96b5b72693eb42140e62f4b3d0bab8 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 3.4E-13 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12420 1b96b5b72693eb42140e62f4b3d0bab8 323 SUPERFAMILY SSF53850 100 314 3.26E-21 T 06-07-2017 AM402_RS12420 1b96b5b72693eb42140e62f4b3d0bab8 323 Gene3D G3DSA:3.40.190.10 291 318 1.5E-10 T 06-07-2017 AM402_RS12420 1b96b5b72693eb42140e62f4b3d0bab8 323 Gene3D G3DSA:3.40.190.10 100 183 1.5E-10 T 06-07-2017 AM402_RS12420 1b96b5b72693eb42140e62f4b3d0bab8 323 Gene3D G3DSA:3.40.190.10 184 280 4.2E-15 T 06-07-2017 AM402_RS12420 1b96b5b72693eb42140e62f4b3d0bab8 323 Gene3D G3DSA:1.10.10.10 3 85 4.7E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12420 1b96b5b72693eb42140e62f4b3d0bab8 323 Pfam PF03466 LysR substrate binding domain 108 315 5.0E-9 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS12420 1b96b5b72693eb42140e62f4b3d0bab8 323 SUPERFAMILY SSF46785 7 84 1.09E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12655 8a5f03db455e010803cc3cec76182e88 357 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 344 1.1E-5 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS12655 8a5f03db455e010803cc3cec76182e88 357 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 60 80 1.1E-5 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS12655 8a5f03db455e010803cc3cec76182e88 357 SUPERFAMILY SSF111369 120 179 7.06E-5 T 06-07-2017 AM402_RS12655 8a5f03db455e010803cc3cec76182e88 357 Pfam PF13533 Biotin-lipoyl like 50 96 2.7E-13 T 06-07-2017 AM402_RS12655 8a5f03db455e010803cc3cec76182e88 357 Gene3D G3DSA:2.40.50.100 50 82 1.2E-12 T 06-07-2017 AM402_RS12655 8a5f03db455e010803cc3cec76182e88 357 Gene3D G3DSA:2.40.50.100 213 246 1.2E-12 T 06-07-2017 AM402_RS12655 8a5f03db455e010803cc3cec76182e88 357 Pfam PF13437 HlyD family secretion protein 216 320 1.3E-8 T 06-07-2017 AM402_RS12655 8a5f03db455e010803cc3cec76182e88 357 SUPERFAMILY SSF111369 42 130 1.7E-10 T 06-07-2017 AM402_RS04670 ede2ebc1c00b0fabccc1dc04598c79d1 257 SUPERFAMILY SSF53474 15 250 5.6E-40 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS04670 ede2ebc1c00b0fabccc1dc04598c79d1 257 Gene3D G3DSA:3.40.50.1820 11 130 9.9E-24 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS04670 ede2ebc1c00b0fabccc1dc04598c79d1 257 Gene3D G3DSA:3.40.50.1820 187 243 9.9E-24 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS04670 ede2ebc1c00b0fabccc1dc04598c79d1 257 Pfam PF00975 Thioesterase domain 24 250 1.7E-44 T 06-07-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 SUPERFAMILY SSF48179 191 287 1.53E-29 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 PIRSF PIRSF000124 1 388 1.9E-139 T 06-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 Gene3D G3DSA:3.40.50.720 1 197 7.8E-67 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.8E-26 T 06-07-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 Gene3D G3DSA:3.40.50.720 285 388 3.9E-49 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 Gene3D G3DSA:1.10.1040.10 198 284 2.0E-34 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 SUPERFAMILY SSF52413 283 388 1.2E-26 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.7E-102 T 06-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 3.3E-7 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 SUPERFAMILY SSF51735 1 194 1.07E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 PIRSF PIRSF500134 1 347 2.3E-121 T 06-07-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 1.8E-32 T 06-07-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS01620 8871642848a01228e1232f3b7e40e589 388 SMART SM00984 300 387 1.1E-11 T 06-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM402_RS02020 a0ffc2eabb170c0ae81d7db5c6f2187a 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 461 1.9E-184 T 06-07-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM402_RS02020 a0ffc2eabb170c0ae81d7db5c6f2187a 463 Gene3D G3DSA:3.40.640.10 90 318 1.9E-29 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS02020 a0ffc2eabb170c0ae81d7db5c6f2187a 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 236.03 T 06-07-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM402_RS02020 a0ffc2eabb170c0ae81d7db5c6f2187a 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 5.5E-171 T 06-07-2017 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM402_RS02020 a0ffc2eabb170c0ae81d7db5c6f2187a 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.9E-8 T 06-07-2017 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM402_RS02020 a0ffc2eabb170c0ae81d7db5c6f2187a 463 SUPERFAMILY SSF53383 79 461 5.25E-46 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS09020 5cf534667d6bfeaed072946b872afb84 180 Gene3D G3DSA:3.90.79.10 8 172 3.3E-60 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS09020 5cf534667d6bfeaed072946b872afb84 180 SUPERFAMILY SSF55811 10 166 8.94E-34 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS09020 5cf534667d6bfeaed072946b872afb84 180 PIRSF PIRSF017340 1 171 1.6E-68 T 06-07-2017 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 AM402_RS09020 5cf534667d6bfeaed072946b872afb84 180 Pfam PF00293 NUDIX domain 36 149 1.7E-18 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 Pfam PF12698 ABC-2 family transporter protein 576 914 1.1E-41 T 06-07-2017 AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 Pfam PF00005 ABC transporter 29 176 4.7E-29 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 Pfam PF00005 ABC transporter 295 438 1.9E-27 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 SUPERFAMILY SSF52540 271 501 1.49E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 SMART SM00382 303 494 4.2E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 SMART SM00382 38 251 2.4E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 Gene3D G3DSA:3.40.50.300 274 501 6.3E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 Gene3D G3DSA:3.40.50.300 7 241 4.2E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12650 c96fa2268cfe182e17f3f4865e5ccb07 922 SUPERFAMILY SSF52540 12 239 1.21E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 06-07-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 SMART SM00382 184 323 1.9E-26 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 SUPERFAMILY SSF140990 402 602 6.8E-73 T 06-07-2017 AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 607 37.3 T 06-07-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 1.8E-246 T 06-07-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 Pfam PF06480 FtsH Extracellular 5 90 7.6E-11 T 06-07-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 Gene3D G3DSA:3.40.50.300 144 331 5.5E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 SUPERFAMILY SSF52540 141 391 1.3E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 Pfam PF01434 Peptidase family M41 382 591 1.1E-81 T 06-07-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AM402_RS00170 dfad3d77bad75acc1fbe179004eab097 646 Gene3D G3DSA:1.10.8.60 332 405 7.6E-29 T 06-07-2017 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 Gene3D G3DSA:3.30.450.20 76 177 8.2E-9 T 06-07-2017 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 Pfam PF00989 PAS fold 84 163 1.3E-5 T 06-07-2017 IPR013767 PAS fold GO:0006355 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 SMART SM00382 225 369 3.4E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 SUPERFAMILY SSF55785 77 176 9.14E-6 T 06-07-2017 IPR000014 PAS domain AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 Gene3D G3DSA:3.40.50.300 202 377 8.5E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 Pfam PF00158 Sigma-54 interaction domain 206 371 5.4E-61 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 Gene3D G3DSA:3.30.70.260 2 68 1.8E-5 T 06-07-2017 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 SUPERFAMILY SSF46689 460 511 2.75E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 418 427 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 512 5.3E-28 T 06-07-2017 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 Gene3D G3DSA:1.10.10.60 459 511 1.4E-25 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 Gene3D G3DSA:1.10.8.60 378 449 7.3E-21 T 06-07-2017 AM402_RS11870 385b0e5b6c9978a9dfc1a7de7be9418c 521 SUPERFAMILY SSF52540 205 446 2.6E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17850 aa2b03b4aff0b985b2c84a53b69e7b6b 337 Pfam PF02661 Fic/DOC family 192 290 4.3E-16 T 06-07-2017 IPR003812 Fido domain AM402_RS17850 aa2b03b4aff0b985b2c84a53b69e7b6b 337 SUPERFAMILY SSF140931 166 335 4.84E-28 T 06-07-2017 IPR003812 Fido domain AM402_RS17850 aa2b03b4aff0b985b2c84a53b69e7b6b 337 Gene3D G3DSA:1.10.3290.10 162 336 2.8E-30 T 06-07-2017 IPR003812 Fido domain AM402_RS05640 a3c102f497d06dbb3514656af0b17b24 428 SUPERFAMILY SSF53850 28 341 4.26E-42 T 06-07-2017 AM402_RS05640 a3c102f497d06dbb3514656af0b17b24 428 Gene3D G3DSA:3.40.190.10 129 264 1.8E-22 T 06-07-2017 AM402_RS05640 a3c102f497d06dbb3514656af0b17b24 428 Pfam PF13343 Bacterial extracellular solute-binding protein 76 292 7.9E-24 T 06-07-2017 AM402_RS05640 a3c102f497d06dbb3514656af0b17b24 428 Gene3D G3DSA:3.40.190.10 1 125 7.2E-22 T 06-07-2017 AM402_RS05640 a3c102f497d06dbb3514656af0b17b24 428 Gene3D G3DSA:3.40.190.10 265 295 7.2E-22 T 06-07-2017 AM402_RS04755 81ebf8374eff74cbce5bdac37b22527a 108 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 9 105 3.0E-28 T 06-07-2017 IPR019110 Uncharacterised protein family, RAQPRD AM402_RS04755 81ebf8374eff74cbce5bdac37b22527a 108 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 23 103 2.4E-29 T 06-07-2017 IPR019110 Uncharacterised protein family, RAQPRD AM402_RS17720 ac4e4271b2069610e305880aa346ee43 450 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 444 1.9E-152 T 06-07-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM402_RS17720 ac4e4271b2069610e305880aa346ee43 450 Pfam PF03796 DnaB-like helicase C terminal domain 187 443 5.5E-102 T 06-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM402_RS17720 ac4e4271b2069610e305880aa346ee43 450 Pfam PF00772 DnaB-like helicase N terminal domain 14 114 1.9E-33 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS17720 ac4e4271b2069610e305880aa346ee43 450 SUPERFAMILY SSF52540 185 436 2.66E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17720 ac4e4271b2069610e305880aa346ee43 450 Gene3D G3DSA:1.10.860.10 15 114 6.5E-36 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM402_RS17720 ac4e4271b2069610e305880aa346ee43 450 SUPERFAMILY SSF48024 13 121 2.35E-34 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS17720 ac4e4271b2069610e305880aa346ee43 450 Gene3D G3DSA:3.40.50.300 177 445 2.5E-96 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17720 ac4e4271b2069610e305880aa346ee43 450 SMART SM00382 204 403 8.7E-5 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS00380 dbdad27a4ea9666fe4b548c94584a0f6 334 PIRSF PIRSF005651 1 333 3.7E-99 T 06-07-2017 IPR010200 HflC GO:0016021|GO:0052547 AM402_RS00380 dbdad27a4ea9666fe4b548c94584a0f6 334 SMART SM00244 18 223 3.8E-41 T 06-07-2017 IPR001107 Band 7 domain AM402_RS00380 dbdad27a4ea9666fe4b548c94584a0f6 334 SUPERFAMILY SSF117892 192 229 1.83E-7 T 06-07-2017 IPR001107 Band 7 domain AM402_RS00380 dbdad27a4ea9666fe4b548c94584a0f6 334 SUPERFAMILY SSF117892 56 158 3.4E-16 T 06-07-2017 IPR001107 Band 7 domain AM402_RS00380 dbdad27a4ea9666fe4b548c94584a0f6 334 TIGRFAM TIGR01932 hflC: HflC protein 1 324 4.2E-122 T 06-07-2017 IPR010200 HflC GO:0016021|GO:0052547 AM402_RS00380 dbdad27a4ea9666fe4b548c94584a0f6 334 Pfam PF01145 SPFH domain / Band 7 family 22 239 6.7E-33 T 06-07-2017 IPR001107 Band 7 domain AM402_RS12000 96013b5d31470752d5c748436743b533 525 Gene3D G3DSA:3.60.120.10 13 515 4.3E-153 T 06-07-2017 IPR005801 ADC synthase GO:0009058 AM402_RS12000 96013b5d31470752d5c748436743b533 525 Pfam PF00425 chorismate binding enzyme 244 504 7.9E-83 T 06-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal AM402_RS12000 96013b5d31470752d5c748436743b533 525 Pfam PF04715 Anthranilate synthase component I, N terminal region 22 190 3.2E-14 T 06-07-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS12000 96013b5d31470752d5c748436743b533 525 SUPERFAMILY SSF56322 12 512 3.01E-151 T 06-07-2017 IPR005801 ADC synthase GO:0009058 AM402_RS12000 96013b5d31470752d5c748436743b533 525 PRINTS PR00095 Anthranilate synthase component I signature 461 475 3.0E-23 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS12000 96013b5d31470752d5c748436743b533 525 PRINTS PR00095 Anthranilate synthase component I signature 352 365 3.0E-23 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS12000 96013b5d31470752d5c748436743b533 525 PRINTS PR00095 Anthranilate synthase component I signature 366 379 3.0E-23 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS12000 96013b5d31470752d5c748436743b533 525 PRINTS PR00095 Anthranilate synthase component I signature 446 460 3.0E-23 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS12000 96013b5d31470752d5c748436743b533 525 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 18 516 8.8E-216 T 06-07-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS12000 96013b5d31470752d5c748436743b533 525 PIRSF PIRSF001373 2 523 2.7E-232 T 06-07-2017 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS06310 e15fdc74fcc0b328a44a3558321f8466 390 Gene3D G3DSA:3.40.50.2000 169 363 2.0E-5 T 06-07-2017 AM402_RS06310 e15fdc74fcc0b328a44a3558321f8466 390 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 10 387 1.6E-171 T 06-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM402_RS06310 e15fdc74fcc0b328a44a3558321f8466 390 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 13 389 42.704 T 06-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM402_RS06310 e15fdc74fcc0b328a44a3558321f8466 390 Pfam PF02684 Lipid-A-disaccharide synthetase 16 384 3.3E-147 T 06-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM402_RS06310 e15fdc74fcc0b328a44a3558321f8466 390 SUPERFAMILY SSF53756 16 367 2.88E-27 T 06-07-2017 AM402_RS10875 de5356102a7e5baf916cb28bca26dac2 336 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 4.6E-27 T 06-07-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AM402_RS10875 de5356102a7e5baf916cb28bca26dac2 336 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 4.6E-27 T 06-07-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AM402_RS10875 de5356102a7e5baf916cb28bca26dac2 336 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 4.6E-27 T 06-07-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AM402_RS10875 de5356102a7e5baf916cb28bca26dac2 336 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 4.6E-27 T 06-07-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AM402_RS10875 de5356102a7e5baf916cb28bca26dac2 336 Gene3D G3DSA:3.40.50.720 1 225 3.2E-73 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10875 de5356102a7e5baf916cb28bca26dac2 336 Gene3D G3DSA:3.90.25.10 306 332 1.9E-7 T 06-07-2017 AM402_RS10875 de5356102a7e5baf916cb28bca26dac2 336 SUPERFAMILY SSF51735 1 334 1.97E-91 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10875 de5356102a7e5baf916cb28bca26dac2 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 2.3E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS05195 28321363b0ed9c2f10b0a8f2d598a27d 136 PIRSF PIRSF029225 1 130 1.0E-36 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS05195 28321363b0ed9c2f10b0a8f2d598a27d 136 SUPERFAMILY SSF102220 27 132 4.71E-29 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS05195 28321363b0ed9c2f10b0a8f2d598a27d 136 Pfam PF03603 DNA polymerase III psi subunit 1 126 1.2E-38 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS05195 28321363b0ed9c2f10b0a8f2d598a27d 136 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 33 128 2.0E-25 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS05195 28321363b0ed9c2f10b0a8f2d598a27d 136 Gene3D G3DSA:3.40.50.10220 25 132 3.3E-30 T 06-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS09875 3e1a5d57d3d836af8f6637de2e1c6dbd 176 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 167 1.0E-89 T 06-07-2017 IPR022523 Flagellar regulator, FliZ AM402_RS09875 3e1a5d57d3d836af8f6637de2e1c6dbd 176 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 163 6.2E-6 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS20525 cbb74c52dbfa1399428a06205a87d83b 169 Gene3D G3DSA:3.40.630.30 8 169 1.5E-36 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS20525 cbb74c52dbfa1399428a06205a87d83b 169 Pfam PF00583 Acetyltransferase (GNAT) family 68 147 1.6E-13 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS20525 cbb74c52dbfa1399428a06205a87d83b 169 SUPERFAMILY SSF55729 10 168 1.42E-28 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 SUPERFAMILY SSF55785 24 123 1.4E-12 T 06-07-2017 IPR000014 PAS domain AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 294 8.3E-39 T 06-07-2017 IPR000160 GGDEF domain AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 SMART SM00267 125 298 3.1E-42 T 06-07-2017 IPR000160 GGDEF domain AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 295 2.2E-39 T 06-07-2017 IPR000160 GGDEF domain AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 130 6.0E-6 T 06-07-2017 IPR000014 PAS domain AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 Gene3D G3DSA:3.30.450.20 25 123 7.0E-11 T 06-07-2017 AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 SUPERFAMILY SSF55073 140 299 2.2E-37 T 06-07-2017 IPR029787 Nucleotide cyclase AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 Pfam PF13426 PAS domain 26 123 1.2E-8 T 06-07-2017 IPR000014 PAS domain AM402_RS02045 d981f2cef9918773390462e7b9ea16e8 301 Gene3D G3DSA:3.30.70.270 137 300 5.3E-41 T 06-07-2017 AM402_RS01810 0d4d2268f597dfb93f0c8eeb5a31e206 151 SUPERFAMILY SSF51283 1 150 4.06E-55 T 06-07-2017 IPR029054 dUTPase-like AM402_RS01810 0d4d2268f597dfb93f0c8eeb5a31e206 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.942 T 06-07-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 AM402_RS01810 0d4d2268f597dfb93f0c8eeb5a31e206 151 Pfam PF00692 dUTPase 17 149 1.7E-40 T 06-07-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AM402_RS01810 0d4d2268f597dfb93f0c8eeb5a31e206 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 9.2E-50 T 06-07-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 AM402_RS01810 0d4d2268f597dfb93f0c8eeb5a31e206 151 Gene3D G3DSA:2.70.40.10 5 150 1.1E-52 T 06-07-2017 IPR029054 dUTPase-like AM402_RS09845 905bc35a75ce55aaea066f3da0064f29 117 Pfam PF05400 Flagellar protein FliT 17 102 1.5E-18 T 06-07-2017 IPR008622 Flagellar protein FliT AM402_RS09845 905bc35a75ce55aaea066f3da0064f29 117 Gene3D G3DSA:1.20.58.380 3 88 7.1E-21 T 06-07-2017 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Pfam PF14559 Tetratricopeptide repeat 462 524 5.4E-8 T 06-07-2017 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 SUPERFAMILY SSF48452 382 550 2.28E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 SUPERFAMILY SSF48452 674 717 2.28E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Gene3D G3DSA:1.25.40.10 49 259 4.5E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 870 1222 2.5E-115 T 06-07-2017 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Gene3D G3DSA:1.25.40.10 677 797 2.8E-7 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 SUPERFAMILY SSF48452 676 800 8.1E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Gene3D G3DSA:1.25.40.10 451 522 1.1E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Gene3D G3DSA:1.25.40.10 380 442 1.1E-4 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Pfam PF13432 Tetratricopeptide repeat 350 409 0.015 T 06-07-2017 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Pfam PF13432 Tetratricopeptide repeat 268 313 5.5E-4 T 06-07-2017 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 PRINTS PR01441 Cellulose synthase subunit C signature 1031 1054 4.5E-21 T 06-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 PRINTS PR01441 Cellulose synthase subunit C signature 485 505 4.5E-21 T 06-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 PRINTS PR01441 Cellulose synthase subunit C signature 1088 1112 4.5E-21 T 06-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 PRINTS PR01441 Cellulose synthase subunit C signature 182 199 4.5E-21 T 06-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 PRINTS PR01441 Cellulose synthase subunit C signature 1128 1149 4.5E-21 T 06-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 PRINTS PR01441 Cellulose synthase subunit C signature 152 164 4.5E-21 T 06-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 SUPERFAMILY SSF48452 260 324 3.94E-11 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 SUPERFAMILY SSF48452 36 158 3.94E-11 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS02055 2ec8292e6705a508f7a43cd50fa08323 1228 Gene3D G3DSA:1.25.40.10 269 325 3.8E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.2E-40 T 06-07-2017 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.2E-40 T 06-07-2017 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.2E-40 T 06-07-2017 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 3.2E-40 T 06-07-2017 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.2E-40 T 06-07-2017 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 Gene3D G3DSA:3.50.50.60 120 232 8.5E-35 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.3E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 06-07-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.4E-126 T 06-07-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 Gene3D G3DSA:3.50.50.60 5 119 4.6E-35 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 8.4E-76 T 06-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 Gene3D G3DSA:3.50.50.60 233 315 7.0E-10 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS15515 a704391309cef56ffcdb7388a9242e74 319 SUPERFAMILY SSF51905 2 313 1.78E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16730 bd12d7059daf9c235370d37898225922 476 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 442 7.0E-210 T 06-07-2017 AM402_RS16730 bd12d7059daf9c235370d37898225922 476 Pfam PF01938 TRAM domain 381 442 4.1E-18 T 06-07-2017 IPR002792 TRAM domain AM402_RS16730 bd12d7059daf9c235370d37898225922 476 SUPERFAMILY SSF102114 129 375 1.06E-62 T 06-07-2017 AM402_RS16730 bd12d7059daf9c235370d37898225922 476 SMART SM00729 149 369 5.9E-63 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM402_RS16730 bd12d7059daf9c235370d37898225922 476 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 439 5.1E-154 T 06-07-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AM402_RS16730 bd12d7059daf9c235370d37898225922 476 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 153 173 - T 06-07-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM402_RS16730 bd12d7059daf9c235370d37898225922 476 Gene3D G3DSA:3.80.30.20 148 380 3.1E-79 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AM402_RS16730 bd12d7059daf9c235370d37898225922 476 Pfam PF00919 Uncharacterized protein family UPF0004 6 106 1.1E-28 T 06-07-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AM402_RS16730 bd12d7059daf9c235370d37898225922 476 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 442 73.508 T 06-07-2017 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AM402_RS16730 bd12d7059daf9c235370d37898225922 476 Pfam PF04055 Radical SAM superfamily 153 327 2.7E-27 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 Gene3D G3DSA:3.40.309.10 899 1090 2.4E-44 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 Gene3D G3DSA:3.20.20.220 258 614 2.7E-122 T 06-07-2017 IPR029041 FAD-linked oxidoreductase-like AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 Pfam PF01619 Proline dehydrogenase 267 566 2.6E-99 T 06-07-2017 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 SUPERFAMILY SSF51730 259 615 9.02E-124 T 06-07-2017 IPR029041 FAD-linked oxidoreductase-like AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 145 256 1.0E-46 T 06-07-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 SUPERFAMILY SSF81935 85 258 2.35E-65 T 06-07-2017 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 SUPERFAMILY SSF47598 4 45 2.67E-11 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 Pfam PF00171 Aldehyde dehydrogenase family 664 1108 2.7E-110 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 Gene3D G3DSA:3.40.605.10 662 898 7.8E-64 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 Gene3D G3DSA:1.10.2060.10 141 257 2.4E-54 T 06-07-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 608 1113 3.9E-228 T 06-07-2017 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 911 922 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 SUPERFAMILY SSF53720 628 1112 2.62E-121 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 Gene3D G3DSA:1.20.5.550 84 135 4.1E-24 T 06-07-2017 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 883 890 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM402_RS09880 de062835ff1d8822824252d486a09c7d 1322 PIRSF PIRSF000197 71 1322 0.0 T 06-07-2017 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM402_RS12050 33f9ef1dba3e06cd7a27da9e88bbc382 174 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 65 75 - T 06-07-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS12050 33f9ef1dba3e06cd7a27da9e88bbc382 174 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 35 173 8.5E-30 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS12050 33f9ef1dba3e06cd7a27da9e88bbc382 174 Gene3D G3DSA:2.60.40.200 24 174 9.6E-47 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS12050 33f9ef1dba3e06cd7a27da9e88bbc382 174 SUPERFAMILY SSF49329 25 174 3.8E-48 T 06-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS12050 33f9ef1dba3e06cd7a27da9e88bbc382 174 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 162 173 - T 06-07-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS17265 a012c0f1b1d4c11abfe44eb0efc7c902 255 SUPERFAMILY SSF56235 2 249 8.27E-46 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS17265 a012c0f1b1d4c11abfe44eb0efc7c902 255 Gene3D G3DSA:3.60.20.10 1 251 9.4E-64 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS17265 a012c0f1b1d4c11abfe44eb0efc7c902 255 Pfam PF13230 Glutamine amidotransferases class-II 1 251 1.5E-107 T 06-07-2017 IPR026869 Putative glutamine amidotransferase type 2 AM402_RS19275 fab0eaa792042ab96fe7b7a96ce27c27 223 Pfam PF09335 SNARE associated Golgi protein 48 173 3.9E-20 T 06-07-2017 IPR032816 SNARE associated Golgi protein AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 SUPERFAMILY SSF57783 701 743 2.72E-7 T 06-07-2017 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 SMART SM00436 133 221 2.7E-47 T 06-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 54.278 T 06-07-2017 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 1.9E-12 T 06-07-2017 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 863 4.2E-24 T 06-07-2017 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Pfam PF01751 Toprim domain 5 142 9.5E-33 T 06-07-2017 IPR006171 Toprim domain AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 634 2.4E-251 T 06-07-2017 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 SMART SM00437 272 527 1.0E-115 T 06-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 SUPERFAMILY SSF57783 744 807 3.91E-19 T 06-07-2017 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:3.30.65.10 707 743 2.8E-11 T 06-07-2017 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:3.30.65.10 745 806 6.8E-26 T 06-07-2017 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:3.30.65.10 587 626 5.0E-11 T 06-07-2017 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 SUPERFAMILY SSF56712 3 609 3.66E-202 T 06-07-2017 IPR023405 DNA topoisomerase, type IA, core domain AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:2.70.20.10 338 473 1.9E-35 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:2.70.20.10 213 335 9.0E-29 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 2.9E-36 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 2.9E-36 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.9E-36 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 2.9E-36 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 2.9E-36 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Pfam PF01131 DNA topoisomerase 157 565 4.5E-126 T 06-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 SMART SM00493 3 132 1.3E-32 T 06-07-2017 IPR006171 Toprim domain AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:3.40.50.140 1 163 6.9E-58 T 06-07-2017 IPR006171 Toprim domain AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 744 2.7E-12 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 6.9E-5 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:2.20.25.10 808 865 6.6E-32 T 06-07-2017 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 06-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 SUPERFAMILY SSF57783 809 864 5.61E-23 T 06-07-2017 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:1.10.460.10 660 666 3.9E-58 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:1.10.460.10 474 578 3.9E-58 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS12045 fadbe61a3ea15ef471e36e41f7a4eb9e 865 Gene3D G3DSA:1.10.460.10 164 211 3.9E-58 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS06000 fac5f8ae683d407ecebe64c06efa284d 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.956 T 06-07-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM402_RS06000 fac5f8ae683d407ecebe64c06efa284d 272 Gene3D G3DSA:1.10.8.100 201 265 9.5E-24 T 06-07-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 AM402_RS06000 fac5f8ae683d407ecebe64c06efa284d 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 1.5E-87 T 06-07-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM402_RS06000 fac5f8ae683d407ecebe64c06efa284d 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 2.5E-76 T 06-07-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AM402_RS06000 fac5f8ae683d407ecebe64c06efa284d 272 SUPERFAMILY SSF53335 17 265 5.52E-77 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS06000 fac5f8ae683d407ecebe64c06efa284d 272 SMART SM00650 25 198 1.3E-77 T 06-07-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AM402_RS06000 fac5f8ae683d407ecebe64c06efa284d 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 06-07-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AM402_RS06000 fac5f8ae683d407ecebe64c06efa284d 272 Gene3D G3DSA:3.40.50.150 6 199 1.4E-67 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07230 b9d49ae9f74ac5b74f6e2964983670f4 284 SUPERFAMILY SSF51197 2 99 6.87E-29 T 06-07-2017 AM402_RS07230 b9d49ae9f74ac5b74f6e2964983670f4 284 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 61 283 3.0E-78 T 06-07-2017 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 AM402_RS07230 b9d49ae9f74ac5b74f6e2964983670f4 284 Pfam PF03848 Tellurite resistance protein TehB 88 280 4.5E-68 T 06-07-2017 IPR015985 Tellurite resistance methyltransferase TehB-like domain AM402_RS07230 b9d49ae9f74ac5b74f6e2964983670f4 284 PIRSF PIRSF005215 1 284 3.7E-102 T 06-07-2017 IPR014431 Tellurite resistance methyltransferase, TehB type-2 AM402_RS07230 b9d49ae9f74ac5b74f6e2964983670f4 284 Pfam PF09313 Domain of unknown function (DUF1971) 7 86 4.6E-25 T 06-07-2017 IPR015392 Domain of unknown function DUF1971 AM402_RS07230 b9d49ae9f74ac5b74f6e2964983670f4 284 Gene3D G3DSA:3.40.50.150 107 283 2.2E-26 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07230 b9d49ae9f74ac5b74f6e2964983670f4 284 SUPERFAMILY SSF53335 111 283 2.39E-24 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07230 b9d49ae9f74ac5b74f6e2964983670f4 284 Gene3D G3DSA:2.60.120.10 2 106 4.1E-36 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 Gene3D G3DSA:3.40.47.10 13 132 2.5E-48 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 Gene3D G3DSA:3.40.47.10 219 298 2.5E-48 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 SUPERFAMILY SSF53901 9 134 6.38E-57 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 SUPERFAMILY SSF53901 175 289 6.38E-57 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 93 111 - T 06-07-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 SUPERFAMILY SSF53901 295 433 3.49E-31 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 Pfam PF02803 Thiolase, C-terminal domain 293 432 2.6E-36 T 06-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 434 65.705 T 06-07-2017 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 Gene3D G3DSA:3.40.47.10 300 434 1.3E-45 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 Gene3D G3DSA:3.40.47.10 172 218 1.3E-45 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 15 432 1.3E-126 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 Pfam PF00108 Thiolase, N-terminal domain 13 286 3.6E-60 T 06-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 ProSitePatterns PS00737 Thiolases signature 2. 380 396 - T 06-07-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 PIRSF PIRSF000429 7 434 1.3E-119 T 06-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 10 434 2.3E-241 T 06-07-2017 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM402_RS08880 a74c62814946213ddd4e948cb6a87e43 434 ProSitePatterns PS00099 Thiolases active site. 415 428 - T 06-07-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM402_RS16870 6cd21ceac2f5c8ea8d975c5715da1671 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 8.2E-23 T 06-07-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM402_RS16870 6cd21ceac2f5c8ea8d975c5715da1671 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.901 T 06-07-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM402_RS16870 6cd21ceac2f5c8ea8d975c5715da1671 124 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 1.9E-32 T 06-07-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM402_RS18470 e62316f47994e8ef070afe34872f37d0 151 SUPERFAMILY SSF109635 9 110 3.53E-37 T 06-07-2017 AM402_RS18470 e62316f47994e8ef070afe34872f37d0 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 06-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM402_RS18470 e62316f47994e8ef070afe34872f37d0 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 06-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM402_RS18470 e62316f47994e8ef070afe34872f37d0 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 6.2E-51 T 06-07-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM402_RS18470 e62316f47994e8ef070afe34872f37d0 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.8E-10 T 06-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM402_RS18470 e62316f47994e8ef070afe34872f37d0 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.699 T 06-07-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM402_RS18470 e62316f47994e8ef070afe34872f37d0 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 06-07-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM402_RS18470 e62316f47994e8ef070afe34872f37d0 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 06-07-2017 AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 SUPERFAMILY SSF49584 152 223 1.2E-20 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 221 5.5E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 SUPERFAMILY SSF49354 20 144 2.28E-36 T 06-07-2017 IPR008962 PapD-like AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 PRINTS PR00969 Pili chaperone signature 26 35 1.2E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 PRINTS PR00969 Pili chaperone signature 161 176 1.2E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 PRINTS PR00969 Pili chaperone signature 71 92 1.2E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 PRINTS PR00969 Pili chaperone signature 99 116 1.2E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 PRINTS PR00969 Pili chaperone signature 126 141 1.2E-31 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 144 1.1E-37 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 Gene3D G3DSA:2.60.40.1070 148 225 2.7E-23 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS10985 388e62f76c741a91f45fb629d7474b9e 230 Gene3D G3DSA:2.60.40.360 25 144 2.5E-41 T 06-07-2017 IPR008962 PapD-like AM402_RS17270 3c6c59d7ab96f38a8c10e56be4d847f5 192 Gene3D G3DSA:3.40.50.10490 1 191 1.9E-62 T 06-07-2017 AM402_RS17270 3c6c59d7ab96f38a8c10e56be4d847f5 192 Pfam PF13580 SIS domain 13 146 1.7E-31 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS17270 3c6c59d7ab96f38a8c10e56be4d847f5 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.5E-84 T 06-07-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM402_RS17270 3c6c59d7ab96f38a8c10e56be4d847f5 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.481 T 06-07-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM402_RS17270 3c6c59d7ab96f38a8c10e56be4d847f5 192 SUPERFAMILY SSF53697 1 190 7.08E-51 T 06-07-2017 AM402_RS11250 f31ad8111abf2f3ce8bf89d68f894b5f 248 SUPERFAMILY SSF52540 2 230 2.35E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11250 f31ad8111abf2f3ce8bf89d68f894b5f 248 Gene3D G3DSA:3.40.50.300 1 231 1.5E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11250 f31ad8111abf2f3ce8bf89d68f894b5f 248 Pfam PF00005 ABC transporter 17 172 3.4E-21 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS11250 f31ad8111abf2f3ce8bf89d68f894b5f 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS11250 f31ad8111abf2f3ce8bf89d68f894b5f 248 SMART SM00382 26 223 7.9E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS11250 f31ad8111abf2f3ce8bf89d68f894b5f 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 4.6E-113 T 06-07-2017 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 AM402_RS05545 e84242281796777e3a2e6e3d64e1a1ea 182 Gene3D G3DSA:1.10.530.10 29 174 7.2E-18 T 06-07-2017 AM402_RS05545 e84242281796777e3a2e6e3d64e1a1ea 182 SUPERFAMILY SSF53955 29 72 1.29E-17 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS05545 e84242281796777e3a2e6e3d64e1a1ea 182 SUPERFAMILY SSF53955 99 178 1.29E-17 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS05545 e84242281796777e3a2e6e3d64e1a1ea 182 Pfam PF01464 Transglycosylase SLT domain 29 162 8.8E-10 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS13970 c5dfcb76dcba2eba406e837503aaf5d5 55 SUPERFAMILY SSF53659 1 55 3.1E-14 T 06-07-2017 AM402_RS13970 c5dfcb76dcba2eba406e837503aaf5d5 55 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 1 51 4.2E-11 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS13970 c5dfcb76dcba2eba406e837503aaf5d5 55 Gene3D G3DSA:3.40.718.10 1 55 7.4E-17 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 SUPERFAMILY SSF50993 36 442 6.02E-86 T 06-07-2017 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 Gene3D G3DSA:2.130.10.120 110 441 1.3E-93 T 06-07-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 541 571 - T 06-07-2017 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 Pfam PF00326 Prolyl oligopeptidase family 495 707 3.9E-69 T 06-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 Gene3D G3DSA:3.40.50.1820 449 688 3.4E-39 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 SUPERFAMILY SSF53474 448 689 6.08E-47 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 564 584 2.3E-53 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 622 637 2.3E-53 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 506 530 2.3E-53 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 640 662 2.3E-53 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 480 498 2.3E-53 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 534 553 2.3E-53 T 06-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM402_RS10265 3bc0c917b64a3a36dea731d042b5f88c 722 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 40 438 7.5E-93 T 06-07-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM402_RS03805 e9643df86341cf63aa071d58cf54b453 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.898 T 06-07-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM402_RS03805 e9643df86341cf63aa071d58cf54b453 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.5E-133 T 06-07-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM402_RS03805 e9643df86341cf63aa071d58cf54b453 309 Gene3D G3DSA:3.40.50.880 34 301 6.5E-123 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS03805 e9643df86341cf63aa071d58cf54b453 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 3.5E-157 T 06-07-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM402_RS03805 e9643df86341cf63aa071d58cf54b453 309 SUPERFAMILY SSF52317 17 297 1.01E-104 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS03805 e9643df86341cf63aa071d58cf54b453 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-117 T 06-07-2017 AM402_RS03805 e9643df86341cf63aa071d58cf54b453 309 PIRSF PIRSF000450 1 308 5.8E-147 T 06-07-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 AM402_RS13375 52387e1c6fe96ca4924754e87a7fc96e 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.6E-26 T 06-07-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM402_RS13375 52387e1c6fe96ca4924754e87a7fc96e 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 50.049 T 06-07-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AM402_RS13375 52387e1c6fe96ca4924754e87a7fc96e 327 Gene3D G3DSA:3.30.930.10 9 327 3.1E-135 T 06-07-2017 AM402_RS13375 52387e1c6fe96ca4924754e87a7fc96e 327 SUPERFAMILY SSF46589 14 99 1.26E-22 T 06-07-2017 IPR010978 tRNA-binding arm GO:0000166 AM402_RS13375 52387e1c6fe96ca4924754e87a7fc96e 327 Pfam PF01409 tRNA synthetases class II core domain (F) 91 326 1.9E-108 T 06-07-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AM402_RS13375 52387e1c6fe96ca4924754e87a7fc96e 327 SUPERFAMILY SSF55681 91 327 1.16E-82 T 06-07-2017 AM402_RS13375 52387e1c6fe96ca4924754e87a7fc96e 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.0E-119 T 06-07-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 SUPERFAMILY SSF52518 359 560 3.3E-59 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 SUPERFAMILY SSF52518 3 178 6.55E-43 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 320 8.1E-32 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 Gene3D G3DSA:3.40.50.970 353 555 1.3E-59 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 3.9E-42 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 Gene3D G3DSA:3.40.50.970 2 175 1.9E-51 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 SUPERFAMILY SSF52467 183 353 2.27E-44 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 4.9E-41 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM402_RS01160 cfaa84d69be03392bb7635f250af4132 574 Gene3D G3DSA:3.40.50.1220 187 343 1.2E-43 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS13425 080e34a388685ad32373ca91a02d55d6 233 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 78 106 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM402_RS13425 080e34a388685ad32373ca91a02d55d6 233 Gene3D G3DSA:1.10.530.10 55 224 2.8E-34 T 06-07-2017 AM402_RS13425 080e34a388685ad32373ca91a02d55d6 233 Pfam PF01464 Transglycosylase SLT domain 61 186 8.7E-26 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS13425 080e34a388685ad32373ca91a02d55d6 233 SUPERFAMILY SSF53955 56 220 2.2E-30 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS17350 e73ab962519eb3239c0539d4061a88de 197 Gene3D G3DSA:3.90.950.10 1 196 1.5E-79 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AM402_RS17350 e73ab962519eb3239c0539d4061a88de 197 SUPERFAMILY SSF52972 1 196 9.42E-75 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AM402_RS17350 e73ab962519eb3239c0539d4061a88de 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.886 T 06-07-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AM402_RS17350 e73ab962519eb3239c0539d4061a88de 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.4E-67 T 06-07-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 AM402_RS17350 e73ab962519eb3239c0539d4061a88de 197 Pfam PF01725 Ham1 family 4 191 4.3E-55 T 06-07-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 AM402_RS18975 538706af325acdeb329624308f153681 624 SUPERFAMILY SSF52922 491 617 5.23E-33 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM402_RS18975 538706af325acdeb329624308f153681 624 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 617 0.0 T 06-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS18975 538706af325acdeb329624308f153681 624 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.4E-26 T 06-07-2017 IPR033248 Transketolase, C-terminal domain AM402_RS18975 538706af325acdeb329624308f153681 624 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.989 T 06-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS18975 538706af325acdeb329624308f153681 624 SMART SM00861 319 484 1.6E-69 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AM402_RS18975 538706af325acdeb329624308f153681 624 SUPERFAMILY SSF52518 8 199 7.54E-76 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18975 538706af325acdeb329624308f153681 624 SUPERFAMILY SSF52518 243 381 7.54E-76 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18975 538706af325acdeb329624308f153681 624 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 06-07-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS18975 538706af325acdeb329624308f153681 624 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 2.2E-40 T 06-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AM402_RS18975 538706af325acdeb329624308f153681 624 SUPERFAMILY SSF52518 317 504 2.2E-58 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18975 538706af325acdeb329624308f153681 624 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS18975 538706af325acdeb329624308f153681 624 Gene3D G3DSA:3.40.50.920 496 617 5.7E-35 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM402_RS18975 538706af325acdeb329624308f153681 624 Gene3D G3DSA:3.40.50.970 26 201 7.6E-74 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18975 538706af325acdeb329624308f153681 624 Gene3D G3DSA:3.40.50.970 242 334 7.6E-74 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS18975 538706af325acdeb329624308f153681 624 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 3.8E-117 T 06-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS18975 538706af325acdeb329624308f153681 624 Gene3D G3DSA:3.40.50.970 335 495 1.4E-36 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS15290 a9ca1e45aaa1c6a90bf6280bca43ccc8 251 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 30 239 8.7E-61 T 06-07-2017 IPR017732 Type IV / VI secretion system, DotU AM402_RS15290 a9ca1e45aaa1c6a90bf6280bca43ccc8 251 Pfam PF09850 Type VI secretion system protein DotU 31 232 1.4E-56 T 06-07-2017 IPR017732 Type IV / VI secretion system, DotU AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 Gene3D G3DSA:3.10.50.30 77 156 1.7E-31 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 Gene3D G3DSA:1.10.287.180 3 76 3.3E-24 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 29.038 T 06-07-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 6.1E-70 T 06-07-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 PIRSF PIRSF006092 1 158 1.0E-56 T 06-07-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.6E-27 T 06-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 8.4E-25 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 SUPERFAMILY SSF54534 81 156 9.81E-24 T 06-07-2017 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 06-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 06-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 SUPERFAMILY SSF46557 4 79 4.19E-26 T 06-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM402_RS03190 75a60337ac4ef507d3b1c1ec0fc33324 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 52.674 T 06-07-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM402_RS16105 e8f976dbc5ed11a1eb9e81fa7db3ef49 355 TIGRFAM TIGR02794 tolA_full: protein TolA 15 355 4.6E-80 T 06-07-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM402_RS16105 e8f976dbc5ed11a1eb9e81fa7db3ef49 355 Gene3D G3DSA:3.30.1150.10 258 355 1.9E-33 T 06-07-2017 AM402_RS16105 e8f976dbc5ed11a1eb9e81fa7db3ef49 355 SUPERFAMILY SSF74653 272 355 1.37E-14 T 06-07-2017 AM402_RS16105 e8f976dbc5ed11a1eb9e81fa7db3ef49 355 Pfam PF06519 TolA C-terminal 263 353 6.2E-27 T 06-07-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM402_RS10660 8dcf6d564090be617339669affc5a395 201 Pfam PF00881 Nitroreductase family 8 178 5.5E-30 T 06-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM402_RS10660 8dcf6d564090be617339669affc5a395 201 Gene3D G3DSA:3.40.109.10 1 198 1.4E-52 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM402_RS10660 8dcf6d564090be617339669affc5a395 201 SUPERFAMILY SSF55469 1 201 8.9E-48 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 Gene3D G3DSA:1.20.5.480 247 292 4.0E-25 T 06-07-2017 AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 Gene3D G3DSA:3.30.70.20 139 172 3.9E-16 T 06-07-2017 AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 PIRSF PIRSF036298 1 304 1.9E-165 T 06-07-2017 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 4.5E-21 T 06-07-2017 IPR015246 Formate dehydrogenase, transmembrane AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 SUPERFAMILY SSF54862 27 289 1.36E-73 T 06-07-2017 AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 7.6E-145 T 06-07-2017 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 Gene3D G3DSA:3.30.70.20 30 103 1.7E-37 T 06-07-2017 AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 Gene3D G3DSA:3.30.70.20 173 227 1.7E-37 T 06-07-2017 AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.1E-25 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS02005 f4e27ab5b6b2135999a4f1fb97ab4096 312 Gene3D G3DSA:3.30.70.20 104 138 3.2E-11 T 06-07-2017 AM402_RS16915 e0b636c44ca3cf04eb30fd658b46ec08 409 Gene3D G3DSA:1.10.3720.10 190 377 8.4E-47 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS16915 e0b636c44ca3cf04eb30fd658b46ec08 409 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 215 372 4.6E-26 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS16915 e0b636c44ca3cf04eb30fd658b46ec08 409 SUPERFAMILY SSF161098 194 376 7.85E-44 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS16865 95689bf8a2b25632395f76be34fdf7d7 321 PIRSF PIRSF005963 2 320 5.1E-133 T 06-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM402_RS16865 95689bf8a2b25632395f76be34fdf7d7 321 SUPERFAMILY SSF102114 53 314 3.79E-70 T 06-07-2017 AM402_RS16865 95689bf8a2b25632395f76be34fdf7d7 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 73 6.9E-7 T 06-07-2017 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM402_RS16865 95689bf8a2b25632395f76be34fdf7d7 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 1.5E-161 T 06-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM402_RS16865 95689bf8a2b25632395f76be34fdf7d7 321 SMART SM00729 84 290 1.1E-16 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM402_RS16865 95689bf8a2b25632395f76be34fdf7d7 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.759 T 06-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM402_RS16865 95689bf8a2b25632395f76be34fdf7d7 321 Gene3D G3DSA:3.20.20.70 55 313 3.4E-74 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS16865 95689bf8a2b25632395f76be34fdf7d7 321 Pfam PF04055 Radical SAM superfamily 91 251 7.5E-17 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS17735 81b2f01324f0f81496d09c9d66941677 320 SUPERFAMILY SSF56349 4 314 3.53E-34 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS17735 81b2f01324f0f81496d09c9d66941677 320 Gene3D G3DSA:1.10.443.10 141 314 2.3E-27 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS17735 81b2f01324f0f81496d09c9d66941677 320 Pfam PF00589 Phage integrase family 154 305 2.5E-19 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS17735 81b2f01324f0f81496d09c9d66941677 320 Gene3D G3DSA:1.10.150.130 13 90 2.5E-6 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS17735 81b2f01324f0f81496d09c9d66941677 320 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 85 7.6E-7 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS09480 f0277be9600176b31f869be9679f1af1 212 Gene3D G3DSA:2.160.10.10 33 205 3.2E-46 T 06-07-2017 AM402_RS09480 f0277be9600176b31f869be9679f1af1 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 06-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM402_RS09480 f0277be9600176b31f869be9679f1af1 212 SUPERFAMILY SSF51161 46 203 3.47E-42 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS09480 f0277be9600176b31f869be9679f1af1 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 7.8E-12 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 378 8.2E-49 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 SUPERFAMILY SSF56645 1 242 3.27E-81 T 06-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 Gene3D G3DSA:1.20.140.10 218 378 5.5E-68 T 06-07-2017 AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 Gene3D G3DSA:2.40.110.10 121 217 7.1E-39 T 06-07-2017 AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 SUPERFAMILY SSF47203 227 378 3.38E-56 T 06-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 Gene3D G3DSA:1.10.540.10 1 119 2.1E-34 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 3.6E-29 T 06-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 PIRSF PIRSF016578 4 379 5.9E-19 T 06-07-2017 AM402_RS04420 e92b33b85b103b32fcbc108a0195ef30 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.7E-25 T 06-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AM402_RS03825 0c74454fdb99f200f5b41c34cb8d799d 213 Gene3D G3DSA:3.20.20.70 4 210 4.2E-77 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS03825 0c74454fdb99f200f5b41c34cb8d799d 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 06-07-2017 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM402_RS03825 0c74454fdb99f200f5b41c34cb8d799d 213 SUPERFAMILY SSF51569 4 209 1.03E-69 T 06-07-2017 AM402_RS03825 0c74454fdb99f200f5b41c34cb8d799d 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 3.5E-85 T 06-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM402_RS03825 0c74454fdb99f200f5b41c34cb8d799d 213 Pfam PF01081 KDPG and KHG aldolase 9 203 4.4E-90 T 06-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM402_RS03825 0c74454fdb99f200f5b41c34cb8d799d 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 06-07-2017 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM402_RS07110 4dd6568859ced95795d7e2ee55614a3f 396 Pfam PF01380 SIS domain 56 190 1.5E-15 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS07110 4dd6568859ced95795d7e2ee55614a3f 396 Pfam PF01380 SIS domain 227 354 2.0E-11 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS07110 4dd6568859ced95795d7e2ee55614a3f 396 Gene3D G3DSA:3.40.50.10490 3 191 4.0E-71 T 06-07-2017 AM402_RS07110 4dd6568859ced95795d7e2ee55614a3f 396 Gene3D G3DSA:3.40.50.10490 212 378 7.6E-51 T 06-07-2017 AM402_RS07110 4dd6568859ced95795d7e2ee55614a3f 396 SUPERFAMILY SSF53697 18 375 7.79E-55 T 06-07-2017 AM402_RS16535 0edfbe601948cfd1b43948fc96b682e6 118 Pfam PF05866 Endodeoxyribonuclease RusA 48 114 1.1E-13 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS16535 0edfbe601948cfd1b43948fc96b682e6 118 Gene3D G3DSA:3.30.1330.70 48 114 1.1E-6 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS16535 0edfbe601948cfd1b43948fc96b682e6 118 SUPERFAMILY SSF103084 12 114 3.92E-8 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 06-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 Pfam PF02817 e3 binding domain 114 147 6.4E-11 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 SUPERFAMILY SSF52777 172 401 1.42E-89 T 06-07-2017 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 SUPERFAMILY SSF51230 2 91 6.15E-24 T 06-07-2017 IPR011053 Single hybrid motif AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 402 1.4E-186 T 06-07-2017 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 Gene3D G3DSA:2.40.50.100 1 83 4.2E-25 T 06-07-2017 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 Gene3D G3DSA:3.30.559.10 163 400 3.9E-92 T 06-07-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 Pfam PF00364 Biotin-requiring enzyme 5 77 1.2E-18 T 06-07-2017 IPR000089 Biotin/lipoyl attachment AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 Gene3D G3DSA:4.10.320.10 114 154 3.6E-16 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 2.7E-82 T 06-07-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM402_RS16170 c24f88cfd820c70ff3d9811e2dfc1128 402 SUPERFAMILY SSF47005 108 151 3.53E-10 T 06-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM402_RS16940 0f8cad41fc0b6dbc69d8dcb5a0e4eb87 200 SUPERFAMILY SSF52499 14 199 3.4E-47 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS16940 0f8cad41fc0b6dbc69d8dcb5a0e4eb87 200 Gene3D G3DSA:3.40.50.850 14 199 4.8E-47 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS16940 0f8cad41fc0b6dbc69d8dcb5a0e4eb87 200 Pfam PF00857 Isochorismatase family 16 192 3.6E-35 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS19415 5fb00096cc309bac5ba7e5f069362a71 158 Pfam PF05981 CreA protein 25 156 2.2E-56 T 06-07-2017 IPR010292 Uncharacterised protein family CreA AM402_RS19415 5fb00096cc309bac5ba7e5f069362a71 158 PIRSF PIRSF003174 2 158 1.4E-65 T 06-07-2017 IPR010292 Uncharacterised protein family CreA AM402_RS19860 c7fbc2bb7e2a695fc1cd40ecc49ea2d5 156 Gene3D G3DSA:2.40.50.100 80 156 1.3E-34 T 06-07-2017 AM402_RS19860 c7fbc2bb7e2a695fc1cd40ecc49ea2d5 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 6.8E-61 T 06-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM402_RS19860 c7fbc2bb7e2a695fc1cd40ecc49ea2d5 156 SUPERFAMILY SSF51230 81 156 2.88E-26 T 06-07-2017 IPR011053 Single hybrid motif AM402_RS19860 c7fbc2bb7e2a695fc1cd40ecc49ea2d5 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 2.6E-18 T 06-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM402_RS19860 c7fbc2bb7e2a695fc1cd40ecc49ea2d5 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 2.6E-18 T 06-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM402_RS19860 c7fbc2bb7e2a695fc1cd40ecc49ea2d5 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 2.6E-18 T 06-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM402_RS19860 c7fbc2bb7e2a695fc1cd40ecc49ea2d5 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 06-07-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS19860 c7fbc2bb7e2a695fc1cd40ecc49ea2d5 156 Pfam PF00364 Biotin-requiring enzyme 82 155 2.8E-27 T 06-07-2017 IPR000089 Biotin/lipoyl attachment AM402_RS01345 1ba852775ba8b86e0a17ec21f7f65527 67 Gene3D G3DSA:3.30.60.30 29 65 9.2E-4 T 06-07-2017 AM402_RS01345 1ba852775ba8b86e0a17ec21f7f65527 67 SUPERFAMILY SSF100897 27 62 8.61E-5 T 06-07-2017 AM402_RS01345 1ba852775ba8b86e0a17ec21f7f65527 67 ProDom PD052090 YDCA PRECURSOR SIGNAL ECS2024 8 60 7.0E-8 T 06-07-2017 AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 Pfam PF01726 LexA DNA binding domain 1 65 7.4E-29 T 06-07-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 Gene3D G3DSA:2.10.109.10 77 199 4.1E-45 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 SUPERFAMILY SSF51306 77 199 4.19E-37 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 Pfam PF00717 Peptidase S24-like 115 180 5.6E-15 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 TIGRFAM TIGR00498 lexA: repressor LexA 1 200 1.0E-82 T 06-07-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 Gene3D G3DSA:1.10.10.10 1 69 5.2E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 151 163 7.3E-13 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 112 122 7.3E-13 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 134 7.3E-13 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 SUPERFAMILY SSF46785 3 69 4.54E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS03885 480198ea738cfc1c36f422aba20da57a 203 Hamap MF_00015 LexA repressor [lexA]. 3 200 32.35 T 06-07-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 7.2E-14 T 06-07-2017 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 7.2E-14 T 06-07-2017 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 7.2E-14 T 06-07-2017 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 7.2E-14 T 06-07-2017 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 Pfam PF01494 FAD binding domain 2 317 2.0E-23 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 2 387 2.8E-146 T 06-07-2017 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 2 387 1.1E-130 T 06-07-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 SUPERFAMILY SSF51905 264 380 1.08E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 SUPERFAMILY SSF51905 1 174 1.08E-54 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 Gene3D G3DSA:3.50.50.60 265 353 8.7E-38 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 Gene3D G3DSA:3.50.50.60 2 179 8.7E-38 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07675 38276febdde4f0a9e75ad4e3f9215c57 390 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 291 304 - T 06-07-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM402_RS06580 e7eebb51c6bdcac1127baff2885a3126 181 SUPERFAMILY SSF49401 36 181 1.74E-13 T 06-07-2017 IPR008966 Adhesion domain AM402_RS06580 e7eebb51c6bdcac1127baff2885a3126 181 Gene3D G3DSA:2.60.40.1090 26 181 5.1E-7 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06580 e7eebb51c6bdcac1127baff2885a3126 181 Pfam PF00419 Fimbrial protein 28 180 8.2E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06580 e7eebb51c6bdcac1127baff2885a3126 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 55 73 6.2E-10 T 06-07-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 AM402_RS06580 e7eebb51c6bdcac1127baff2885a3126 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 31 54 6.2E-10 T 06-07-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 AM402_RS06580 e7eebb51c6bdcac1127baff2885a3126 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 9 30 6.2E-10 T 06-07-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 AM402_RS06580 e7eebb51c6bdcac1127baff2885a3126 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 75 89 6.2E-10 T 06-07-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 AM402_RS20295 a317ec31fd459f4fa8180f0f5f69dbc7 166 SMART SM00738 1 100 6.7E-23 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM402_RS20295 a317ec31fd459f4fa8180f0f5f69dbc7 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 164 44.437 T 06-07-2017 IPR010215 Transcription antitermination protein RfaH GO:0006355 AM402_RS20295 a317ec31fd459f4fa8180f0f5f69dbc7 166 Gene3D G3DSA:3.30.70.940 1 97 1.9E-14 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM402_RS20295 a317ec31fd459f4fa8180f0f5f69dbc7 166 Pfam PF02357 Transcription termination factor nusG 2 96 1.4E-17 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM402_RS20295 a317ec31fd459f4fa8180f0f5f69dbc7 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 161 3.2E-57 T 06-07-2017 IPR010215 Transcription antitermination protein RfaH GO:0006355 AM402_RS20295 a317ec31fd459f4fa8180f0f5f69dbc7 166 SUPERFAMILY SSF82679 1 98 4.58E-27 T 06-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 61.32 T 06-07-2017 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 SMART SM00829 12 338 1.3E-5 T 06-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 Gene3D G3DSA:3.40.50.720 173 287 4.9E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.0E-183 T 06-07-2017 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 7.8E-32 T 06-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 SUPERFAMILY SSF50129 1 173 2.74E-54 T 06-07-2017 IPR011032 GroES-like AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 06-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 Gene3D G3DSA:3.90.180.10 1 172 8.5E-52 T 06-07-2017 IPR011032 GroES-like AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 3.0E-28 T 06-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM402_RS01690 ab693b9481866502317baae514ea6e9b 341 SUPERFAMILY SSF51735 141 305 1.77E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS02325 cbe087877cf728532a0dff56d4aba1ba 208 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 207 28.293 T 06-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM402_RS02325 cbe087877cf728532a0dff56d4aba1ba 208 PIRSF PIRSF003078 1 208 1.5E-61 T 06-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM402_RS02325 cbe087877cf728532a0dff56d4aba1ba 208 Gene3D G3DSA:3.40.50.150 7 208 1.4E-66 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS02325 cbe087877cf728532a0dff56d4aba1ba 208 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 208 1.6E-54 T 06-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM402_RS02325 cbe087877cf728532a0dff56d4aba1ba 208 Pfam PF02527 rRNA small subunit methyltransferase G 23 206 7.7E-61 T 06-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM402_RS02325 cbe087877cf728532a0dff56d4aba1ba 208 SUPERFAMILY SSF53335 6 206 1.44E-35 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS00545 7de9b10d1edcf25d39d48bb2966a22ed 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 118 199 4.0E-10 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS00545 7de9b10d1edcf25d39d48bb2966a22ed 238 Gene3D G3DSA:3.40.50.1000 105 238 3.8E-27 T 06-07-2017 IPR023214 HAD-like domain AM402_RS00545 7de9b10d1edcf25d39d48bb2966a22ed 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 5.9E-14 T 06-07-2017 IPR023214 HAD-like domain AM402_RS00545 7de9b10d1edcf25d39d48bb2966a22ed 238 SUPERFAMILY SSF56784 10 238 6.64E-33 T 06-07-2017 IPR023214 HAD-like domain AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 SUPERFAMILY SSF51206 8 136 1.7E-35 T 06-07-2017 IPR018490 Cyclic nucleotide-binding-like AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 Gene3D G3DSA:2.60.120.10 6 143 1.6E-44 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 06-07-2017 IPR018488 Cyclic nucleotide-binding, conserved site AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 06-07-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 SMART SM00419 160 208 4.5E-17 T 06-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 06-07-2017 IPR018488 Cyclic nucleotide-binding, conserved site AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.0E-24 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 SMART SM00100 2 122 4.8E-27 T 06-07-2017 IPR000595 Cyclic nucleotide-binding domain AM402_RS03515 6f6f2fe8345a0eaa5f1349e70bca9746 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11145 c8bebe5191719a11076495b57c2c2d79 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 2.2E-98 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS11145 c8bebe5191719a11076495b57c2c2d79 335 PIRSF PIRSF000267 2 335 1.2E-89 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS11145 c8bebe5191719a11076495b57c2c2d79 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 212 1.4E-45 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS03150 d50faad59eb4743b24c4a1c29a267739 279 SUPERFAMILY SSF53850 1 257 1.34E-65 T 06-07-2017 AM402_RS03150 d50faad59eb4743b24c4a1c29a267739 279 SMART SM00062 34 257 1.7E-66 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM402_RS03150 d50faad59eb4743b24c4a1c29a267739 279 Gene3D G3DSA:3.40.190.10 113 204 6.3E-16 T 06-07-2017 AM402_RS03150 d50faad59eb4743b24c4a1c29a267739 279 Gene3D G3DSA:3.40.190.10 216 258 9.6E-41 T 06-07-2017 AM402_RS03150 d50faad59eb4743b24c4a1c29a267739 279 Gene3D G3DSA:3.40.190.10 31 112 9.6E-41 T 06-07-2017 AM402_RS03150 d50faad59eb4743b24c4a1c29a267739 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 255 1.7E-58 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 Gene3D G3DSA:3.40.50.2300 51 174 5.6E-19 T 06-07-2017 AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 SUPERFAMILY SSF47413 1 59 1.5E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 Gene3D G3DSA:3.40.50.2300 175 311 3.9E-28 T 06-07-2017 AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 Gene3D G3DSA:1.10.260.40 1 50 6.8E-20 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-16 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 SUPERFAMILY SSF53822 65 330 2.54E-40 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 71 328 4.9E-51 T 06-07-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 SMART SM00354 1 73 7.0E-20 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS06710 3c0579f26b292d233a89672f222c629e 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 AM402_RS07530 2f27be001472bddf4f10c27c6339d464 204 Gene3D G3DSA:3.40.50.300 2 196 4.2E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07530 2f27be001472bddf4f10c27c6339d464 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 187 1.8E-61 T 06-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 AM402_RS07530 2f27be001472bddf4f10c27c6339d464 204 Pfam PF01121 Dephospho-CoA kinase 4 178 1.0E-70 T 06-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 AM402_RS07530 2f27be001472bddf4f10c27c6339d464 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 26.291 T 06-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 AM402_RS07530 2f27be001472bddf4f10c27c6339d464 204 SUPERFAMILY SSF52540 1 191 3.68E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18135 7a7db968e15cad73013f7b2f87c6cd1e 182 SUPERFAMILY SSF49401 30 182 3.78E-31 T 06-07-2017 IPR008966 Adhesion domain AM402_RS18135 7a7db968e15cad73013f7b2f87c6cd1e 182 Gene3D G3DSA:2.60.40.1090 30 181 9.2E-34 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18135 7a7db968e15cad73013f7b2f87c6cd1e 182 Pfam PF00419 Fimbrial protein 37 181 9.2E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS09715 1714b7694e55eb2d2b58371c853a199e 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.2E-32 T 06-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM402_RS09715 1714b7694e55eb2d2b58371c853a199e 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 3.8E-23 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM402_RS09715 1714b7694e55eb2d2b58371c853a199e 251 SUPERFAMILY SSF117143 77 209 2.48E-16 T 06-07-2017 AM402_RS09715 1714b7694e55eb2d2b58371c853a199e 251 Pfam PF00460 Flagella basal body rod protein 5 35 6.5E-9 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM402_RS03415 2b2de7ede855fc2495518b325a873c3a 503 Pfam PF05193 Peptidase M16 inactive domain 200 370 5.0E-10 T 06-07-2017 IPR007863 Peptidase M16, C-terminal AM402_RS03415 2b2de7ede855fc2495518b325a873c3a 503 SUPERFAMILY SSF63411 29 239 5.13E-16 T 06-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM402_RS03415 2b2de7ede855fc2495518b325a873c3a 503 Gene3D G3DSA:3.30.830.10 24 248 1.4E-14 T 06-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AM402_RS16750 5338100aab4f4a023de1e06fdf5daf08 507 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 494 24.127 T 06-07-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM402_RS16750 5338100aab4f4a023de1e06fdf5daf08 507 SUPERFAMILY SSF56317 217 488 9.55E-36 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS16750 5338100aab4f4a023de1e06fdf5daf08 507 Pfam PF00795 Carbon-nitrogen hydrolase 224 469 6.3E-37 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS16750 5338100aab4f4a023de1e06fdf5daf08 507 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 456 2.8E-104 T 06-07-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM402_RS16750 5338100aab4f4a023de1e06fdf5daf08 507 Gene3D G3DSA:3.60.110.10 221 470 1.6E-19 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS08105 7e438db0411211bb928f53d783497035 352 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 350 1.4E-175 T 06-07-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM402_RS08105 7e438db0411211bb928f53d783497035 352 Gene3D G3DSA:3.30.428.10 178 350 1.0E-70 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 AM402_RS08105 7e438db0411211bb928f53d783497035 352 SUPERFAMILY SSF54197 6 179 2.8E-70 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 AM402_RS08105 7e438db0411211bb928f53d783497035 352 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 350 2.1E-60 T 06-07-2017 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM402_RS08105 7e438db0411211bb928f53d783497035 352 SUPERFAMILY SSF54197 182 349 3.09E-50 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 AM402_RS08105 7e438db0411211bb928f53d783497035 352 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 10 178 3.4E-66 T 06-07-2017 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM402_RS08105 7e438db0411211bb928f53d783497035 352 Gene3D G3DSA:3.30.428.10 46 177 1.0E-54 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 AM402_RS08105 7e438db0411211bb928f53d783497035 352 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 06-07-2017 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM402_RS08105 7e438db0411211bb928f53d783497035 352 PIRSF PIRSF000808 3 345 9.1E-121 T 06-07-2017 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 Pfam PF13343 Bacterial extracellular solute-binding protein 76 320 2.5E-40 T 06-07-2017 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 Gene3D G3DSA:3.40.190.10 133 269 2.7E-24 T 06-07-2017 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 SUPERFAMILY SSF53850 25 344 4.02E-94 T 06-07-2017 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 Gene3D G3DSA:3.40.190.10 25 131 1.3E-62 T 06-07-2017 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 Gene3D G3DSA:3.40.190.10 270 311 1.3E-62 T 06-07-2017 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PIRSF PIRSF019574 1 347 3.1E-130 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 292 318 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03960 e5e94a2a65ae7acf75c90126e9aab6ab 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.1E-93 T 06-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM402_RS03830 0a0dcad9772b619742c785f1146b3520 618 SUPERFAMILY SSF143975 16 433 5.62E-144 T 06-07-2017 AM402_RS03830 0a0dcad9772b619742c785f1146b3520 618 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 19 616 0.0 T 06-07-2017 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AM402_RS03830 0a0dcad9772b619742c785f1146b3520 618 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 169 179 - T 06-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM402_RS03830 0a0dcad9772b619742c785f1146b3520 618 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 520 531 - T 06-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM402_RS03830 0a0dcad9772b619742c785f1146b3520 618 SUPERFAMILY SSF52016 434 615 4.0E-58 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM402_RS03830 0a0dcad9772b619742c785f1146b3520 618 Pfam PF00920 Dehydratase family 83 613 5.6E-161 T 06-07-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 06-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 Pfam PF00158 Sigma-54 interaction domain 141 307 5.6E-70 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 Pfam PF02954 Bacterial regulatory protein, Fis family 428 468 1.2E-14 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 468 5.5E-230 T 06-07-2017 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 Gene3D G3DSA:3.40.50.2300 3 138 8.1E-36 T 06-07-2017 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 Pfam PF00072 Response regulator receiver domain 6 114 5.0E-28 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 Gene3D G3DSA:1.10.10.60 401 471 1.5E-21 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 SMART SM00382 161 304 3.9E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 Gene3D G3DSA:1.10.8.60 314 392 1.8E-23 T 06-07-2017 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 SUPERFAMILY SSF52172 1 186 7.54E-44 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 SUPERFAMILY SSF46689 381 471 6.27E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 Gene3D G3DSA:3.40.50.300 139 313 3.5E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 SMART SM00448 4 115 1.9E-33 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 SUPERFAMILY SSF52540 140 384 2.62E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 471 3.0E-10 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS03220 e35e53dad1f55a52e5587ea64fe1bda4 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 3.0E-10 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS04340 c2a1af064396bf74360284100fb2bb8d 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 260 1.1E-81 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM402_RS04340 c2a1af064396bf74360284100fb2bb8d 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 06-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM402_RS04340 c2a1af064396bf74360284100fb2bb8d 261 SUPERFAMILY SSF52096 2 261 8.44E-80 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS04340 c2a1af064396bf74360284100fb2bb8d 261 Gene3D G3DSA:3.90.226.10 3 198 2.8E-67 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS04340 c2a1af064396bf74360284100fb2bb8d 261 Gene3D G3DSA:1.10.12.10 200 261 1.9E-20 T 06-07-2017 IPR014748 Crontonase, C-terminal AM402_RS04340 c2a1af064396bf74360284100fb2bb8d 261 Hamap MF_01051 Carnitinyl-CoA dehydratase [caiD]. 1 261 63.961 T 06-07-2017 IPR022852 Carnitinyl-CoA dehydratase GO:0016836 AM402_RS13620 2a4ea3bb467e08d65adfde8901711514 118 SUPERFAMILY SSF142906 1 117 5.75E-33 T 06-07-2017 AM402_RS13620 2a4ea3bb467e08d65adfde8901711514 118 Pfam PF04237 YjbR 15 116 6.7E-18 T 06-07-2017 IPR007351 Uncharacterised protein YjbR AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 SUPERFAMILY SSF52009 293 411 1.57E-24 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 SUPERFAMILY SSF51621 418 712 1.91E-93 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 SUPERFAMILY SSF55781 2 158 1.09E-27 T 06-07-2017 IPR029016 GAF domain-like AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 Gene3D G3DSA:3.50.30.10 301 413 3.5E-29 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 Gene3D G3DSA:1.10.274.10 199 300 2.7E-33 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 06-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 SUPERFAMILY SSF47831 200 309 2.88E-27 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 Pfam PF01590 GAF domain 18 152 5.4E-15 T 06-07-2017 IPR003018 GAF domain GO:0005515 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 Gene3D G3DSA:3.20.20.60 420 736 7.6E-94 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 Gene3D G3DSA:3.30.450.40 1 158 2.7E-42 T 06-07-2017 IPR029016 GAF domain-like AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 706 1.4E-95 T 06-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 3.2E-23 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 198 730 6.4E-124 T 06-07-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 6.0E-23 T 06-07-2017 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 6.0E-23 T 06-07-2017 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 6.0E-23 T 06-07-2017 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 6.0E-23 T 06-07-2017 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 SMART SM00065 17 164 1.0E-21 T 06-07-2017 IPR003018 GAF domain GO:0005515 AM402_RS06060 daac495c2545daee85c5b79f7e86e58d 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 2.8E-15 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS17290 87c835a56fbca24d62da2b576b47f992 306 Gene3D G3DSA:3.40.190.10 93 177 3.3E-20 T 06-07-2017 AM402_RS17290 87c835a56fbca24d62da2b576b47f992 306 SUPERFAMILY SSF46785 5 107 2.04E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS17290 87c835a56fbca24d62da2b576b47f992 306 Gene3D G3DSA:1.10.10.10 3 83 1.5E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS17290 87c835a56fbca24d62da2b576b47f992 306 Gene3D G3DSA:3.40.190.10 178 258 2.2E-17 T 06-07-2017 AM402_RS17290 87c835a56fbca24d62da2b576b47f992 306 SUPERFAMILY SSF53850 89 295 2.71E-41 T 06-07-2017 AM402_RS17290 87c835a56fbca24d62da2b576b47f992 306 Pfam PF03466 LysR substrate binding domain 88 291 7.5E-36 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS17290 87c835a56fbca24d62da2b576b47f992 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.2E-13 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS02865 394346e6da9493a4e76ba48bf5ced85c 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 2.5E-163 T 06-07-2017 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AM402_RS02865 394346e6da9493a4e76ba48bf5ced85c 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 2.5E-163 T 06-07-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM402_RS02865 394346e6da9493a4e76ba48bf5ced85c 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 6.2E-43 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM402_RS02865 394346e6da9493a4e76ba48bf5ced85c 452 PIRSF PIRSF006351 1 448 1.1E-129 T 06-07-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AM402_RS00035 bcf1a6f78ba6d386a7eace2de20c38ee 188 Pfam PF00419 Fimbrial protein 40 187 5.4E-21 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00035 bcf1a6f78ba6d386a7eace2de20c38ee 188 Gene3D G3DSA:2.60.40.1090 38 188 5.1E-39 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00035 bcf1a6f78ba6d386a7eace2de20c38ee 188 SUPERFAMILY SSF49401 46 188 3.78E-33 T 06-07-2017 IPR008966 Adhesion domain AM402_RS19750 b738ad2273da1c88a15e3491d0c6e7f1 177 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 163 23.252 T 06-07-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM402_RS19750 b738ad2273da1c88a15e3491d0c6e7f1 177 Gene3D G3DSA:2.60.450.10 24 159 3.9E-39 T 06-07-2017 AM402_RS19750 b738ad2273da1c88a15e3491d0c6e7f1 177 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 162 2.1E-44 T 06-07-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM402_RS19750 b738ad2273da1c88a15e3491d0c6e7f1 177 Pfam PF03968 OstA-like protein 34 143 6.8E-27 T 06-07-2017 IPR005653 Organic solvent tolerance-like, N-terminal AM402_RS00075 28e1a23b3afcb5d19487ba1e2d08dd3a 250 SMART SM00671 120 155 4.1E-4 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS00075 28e1a23b3afcb5d19487ba1e2d08dd3a 250 SMART SM00671 159 195 0.0013 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS00075 28e1a23b3afcb5d19487ba1e2d08dd3a 250 SUPERFAMILY SSF81901 55 201 1.96E-16 T 06-07-2017 AM402_RS00075 28e1a23b3afcb5d19487ba1e2d08dd3a 250 Gene3D G3DSA:1.25.40.10 53 201 1.5E-17 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS00075 28e1a23b3afcb5d19487ba1e2d08dd3a 250 Pfam PF08238 Sel1 repeat 162 188 0.056 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS00075 28e1a23b3afcb5d19487ba1e2d08dd3a 250 Pfam PF08238 Sel1 repeat 128 151 1.6E-4 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS15005 a9e95d95d406bac189ac3de685dcfebb 152 SUPERFAMILY SSF52335 5 151 7.72E-60 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS15005 a9e95d95d406bac189ac3de685dcfebb 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 37.601 T 06-07-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM402_RS15005 a9e95d95d406bac189ac3de685dcfebb 152 Pfam PF02142 MGS-like domain 26 118 1.7E-19 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS15005 a9e95d95d406bac189ac3de685dcfebb 152 Gene3D G3DSA:3.40.50.1380 4 151 7.1E-67 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS15005 a9e95d95d406bac189ac3de685dcfebb 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.0E-66 T 06-07-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM402_RS15005 a9e95d95d406bac189ac3de685dcfebb 152 SMART SM00851 25 118 1.7E-25 T 06-07-2017 IPR011607 Methylglyoxal synthase-like domain AM402_RS15005 a9e95d95d406bac189ac3de685dcfebb 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 06-07-2017 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM402_RS15005 a9e95d95d406bac189ac3de685dcfebb 152 PIRSF PIRSF006614 8 151 1.6E-67 T 06-07-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AM402_RS01560 9bcb11a29fef56cedceafb4acfb461c3 232 Gene3D G3DSA:1.10.10.10 129 229 4.4E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01560 9bcb11a29fef56cedceafb4acfb461c3 232 SMART SM00448 2 111 6.6E-46 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS01560 9bcb11a29fef56cedceafb4acfb461c3 232 Gene3D G3DSA:3.40.50.2300 2 125 5.3E-41 T 06-07-2017 AM402_RS01560 9bcb11a29fef56cedceafb4acfb461c3 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 1.9E-21 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS01560 9bcb11a29fef56cedceafb4acfb461c3 232 SUPERFAMILY SSF52172 1 188 4.13E-42 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS01560 9bcb11a29fef56cedceafb4acfb461c3 232 SMART SM00862 152 228 2.0E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS01560 9bcb11a29fef56cedceafb4acfb461c3 232 Pfam PF00072 Response regulator receiver domain 4 112 5.2E-30 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 Gene3D G3DSA:3.40.50.300 2 208 1.9E-74 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 66.245 T 06-07-2017 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 SUPERFAMILY SSF52540 72 354 6.35E-74 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 Pfam PF00270 DEAD/DEAH box helicase 27 193 2.7E-46 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 Pfam PF03880 DbpA RNA binding domain 384 454 5.2E-25 T 06-07-2017 IPR005580 DbpA, RNA-binding domain AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 SMART SM00490 255 336 1.1E-29 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 Pfam PF00271 Helicase conserved C-terminal domain 228 336 2.6E-28 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 Gene3D G3DSA:3.40.50.300 215 365 7.5E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM402_RS18895 be841c8a8908fe9e5cbace0ebb9fc92c 457 SMART SM00487 22 219 5.7E-58 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS19470 101788d4607b62373b58a9dd62ccbef6 337 Pfam PF16220 Domain of unknown function (DUF4880) 33 72 9.9E-9 T 06-07-2017 IPR032623 FecR, N-terminal AM402_RS19470 101788d4607b62373b58a9dd62ccbef6 337 PIRSF PIRSF018266 23 337 4.9E-68 T 06-07-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM402_RS19470 101788d4607b62373b58a9dd62ccbef6 337 Pfam PF04773 FecR protein 137 221 6.4E-18 T 06-07-2017 IPR006860 FecR protein AM402_RS18280 496f2b7b6e85f493b3d8361d1b6ddfc2 148 Gene3D G3DSA:3.90.1530.10 9 86 4.7E-13 T 06-07-2017 AM402_RS18280 496f2b7b6e85f493b3d8361d1b6ddfc2 148 Pfam PF02195 ParB-like nuclease domain 21 78 6.7E-6 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS18280 496f2b7b6e85f493b3d8361d1b6ddfc2 148 SUPERFAMILY SSF110849 4 130 2.62E-31 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS10825 882bf9d4ec7f8f9811170af7564d05bc 183 Pfam PF00881 Nitroreductase family 8 161 1.9E-22 T 06-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM402_RS10825 882bf9d4ec7f8f9811170af7564d05bc 183 Gene3D G3DSA:3.40.109.10 1 182 2.6E-40 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM402_RS10825 882bf9d4ec7f8f9811170af7564d05bc 183 SUPERFAMILY SSF55469 1 182 4.19E-40 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM402_RS10825 882bf9d4ec7f8f9811170af7564d05bc 183 PIRSF PIRSF000232 1 183 8.0E-64 T 06-07-2017 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 SUPERFAMILY SSF46565 1 106 6.54E-26 T 06-07-2017 IPR001623 DnaJ domain AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 Gene3D G3DSA:1.10.287.110 2 94 5.7E-27 T 06-07-2017 IPR001623 DnaJ domain AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 SMART SM00271 4 61 3.2E-26 T 06-07-2017 IPR001623 DnaJ domain AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 Pfam PF01556 DnaJ C terminal domain 128 284 5.4E-35 T 06-07-2017 IPR002939 Chaperone DnaJ, C-terminal AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 SUPERFAMILY SSF49493 212 294 5.49E-17 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 06-07-2017 IPR018253 DnaJ domain, conserved site AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 Gene3D G3DSA:2.60.260.20 209 284 8.5E-17 T 06-07-2017 AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 PRINTS PR00625 DnaJ domain signature 41 61 7.4E-16 T 06-07-2017 IPR001623 DnaJ domain AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 PRINTS PR00625 DnaJ domain signature 7 25 7.4E-16 T 06-07-2017 IPR001623 DnaJ domain AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 PRINTS PR00625 DnaJ domain signature 25 40 7.4E-16 T 06-07-2017 IPR001623 DnaJ domain AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 Pfam PF00226 DnaJ domain 5 66 1.6E-23 T 06-07-2017 IPR001623 DnaJ domain AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 Gene3D G3DSA:2.60.260.20 119 207 8.0E-16 T 06-07-2017 AM402_RS14960 5aace4198edb2da2ac18493c6f2f3428 314 SUPERFAMILY SSF49493 122 215 4.84E-15 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 SUPERFAMILY SSF52540 364 570 7.93E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 544 557 - T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 299 571 65.276 T 06-07-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 SMART SM00963 276 356 4.9E-24 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 299 570 1.2E-115 T 06-07-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 SMART SM00382 369 560 6.6E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 Gene3D G3DSA:1.20.120.140 261 352 1.9E-35 T 06-07-2017 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 Pfam PF02881 SRP54-type protein, helical bundle domain 287 352 1.3E-12 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 Pfam PF00448 SRP54-type protein, GTPase domain 370 570 2.2E-79 T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 Gene3D G3DSA:3.40.50.300 364 570 2.2E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 SUPERFAMILY SSF47364 271 350 1.31E-22 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS19985 2c5473eaa629af16b726201a2e41968d 574 SMART SM00962 370 571 4.4E-126 T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 325 44.715 T 06-07-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 Pfam PF00365 Phosphofructokinase 7 281 4.8E-104 T 06-07-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 Gene3D G3DSA:3.40.50.450 5 219 1.8E-73 T 06-07-2017 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 ProSitePatterns PS00433 Phosphofructokinase signature. 249 267 - T 06-07-2017 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 SUPERFAMILY SSF53784 3 318 1.18E-111 T 06-07-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 305 1.3E-122 T 06-07-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PIRSF PIRSF000532 4 325 1.9E-125 T 06-07-2017 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 162 178 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 142 160 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 245 267 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 124 141 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 197 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS01310 9186cdb4b0c717f5bcc1c9f9f6827a3d 325 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 218 230 2.5E-80 T 06-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.2E-147 T 06-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 SUPERFAMILY SSF52540 152 338 4.36E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 Gene3D G3DSA:2.70.210.12 2 156 6.7E-60 T 06-07-2017 IPR006169 GTP1/OBG domain GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.349 T 06-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 06-07-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 Pfam PF01018 GTP1/OBG 3 157 2.4E-60 T 06-07-2017 IPR006169 GTP1/OBG domain GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 PIRSF PIRSF002401 1 377 8.0E-140 T 06-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 SUPERFAMILY SSF82051 2 157 2.22E-57 T 06-07-2017 IPR006169 GTP1/OBG domain GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 Pfam PF01926 50S ribosome-binding GTPase 162 284 6.4E-24 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 Gene3D G3DSA:3.40.50.300 160 344 1.5E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.8E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.8E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.8E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS00195 c2a05826dec7287b7cf3bf896bdc5dba 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.8E-34 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS01605 af5cfd68d4ab0abe4ad39cae2baca62a 410 Pfam PF01943 Polysaccharide biosynthesis protein 8 269 5.4E-13 T 06-07-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM402_RS19810 fe66a90a7dab85bea232a2b49a2380d6 481 PIRSF PIRSF004919 14 481 5.7E-146 T 06-07-2017 IPR025502 TldD AM402_RS19810 fe66a90a7dab85bea232a2b49a2380d6 481 SUPERFAMILY SSF111283 20 480 3.27E-131 T 06-07-2017 AM402_RS19810 fe66a90a7dab85bea232a2b49a2380d6 481 Pfam PF01523 Putative modulator of DNA gyrase 36 332 4.9E-63 T 06-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM402_RS05115 0446e050caaa25915912cea503430dd2 306 Pfam PF03797 Autotransporter beta-domain 113 291 3.9E-12 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS05115 0446e050caaa25915912cea503430dd2 306 SUPERFAMILY SSF103515 57 306 1.06E-18 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS05115 0446e050caaa25915912cea503430dd2 306 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 133 306 2.4E-11 T 06-07-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM402_RS05115 0446e050caaa25915912cea503430dd2 306 Gene3D G3DSA:2.40.128.130 113 306 2.1E-17 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS20050 14166daf8ba84db8283bb6a26ff1a060 367 Gene3D G3DSA:1.20.1090.10 160 365 4.0E-69 T 06-07-2017 AM402_RS20050 14166daf8ba84db8283bb6a26ff1a060 367 Gene3D G3DSA:3.40.50.1970 2 159 2.0E-45 T 06-07-2017 AM402_RS20050 14166daf8ba84db8283bb6a26ff1a060 367 SUPERFAMILY SSF56796 2 360 8.37E-90 T 06-07-2017 AM402_RS20050 14166daf8ba84db8283bb6a26ff1a060 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 350 4.3E-68 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM402_RS20050 14166daf8ba84db8283bb6a26ff1a060 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS20050 14166daf8ba84db8283bb6a26ff1a060 367 PIRSF PIRSF000112 1 363 3.9E-92 T 06-07-2017 AM402_RS03820 65653441743dcbb6a36a5a8eb2e6a860 572 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 6 566 0.0 T 06-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM402_RS03820 65653441743dcbb6a36a5a8eb2e6a860 572 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 567 40.755 T 06-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM402_RS03820 65653441743dcbb6a36a5a8eb2e6a860 572 PIRSF PIRSF000719 1 571 1.6E-255 T 06-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM402_RS03820 65653441743dcbb6a36a5a8eb2e6a860 572 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 7 563 9.0E-240 T 06-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.5E-12 T 06-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 Gene3D G3DSA:2.40.50.140 16 103 1.8E-16 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 06-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.6E-205 T 06-07-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 460 3.8E-82 T 06-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.176 T 06-07-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 Gene3D G3DSA:3.30.930.10 109 464 5.8E-111 T 06-07-2017 AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 SUPERFAMILY SSF50249 16 101 4.07E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15120 4fcf71ab5cd2eac424a29f351d7a4ef8 466 SUPERFAMILY SSF55681 98 465 1.95E-95 T 06-07-2017 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 115 138 9.6E-70 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 226 246 9.6E-70 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 5 21 9.6E-70 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 34 60 9.6E-70 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 248 268 9.6E-70 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 272 298 9.6E-70 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 195 220 9.6E-70 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 SUPERFAMILY SSF48029 115 325 4.97E-64 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 Pfam PF14841 FliG middle domain 117 188 1.5E-24 T 06-07-2017 IPR032779 Flagellar motor switch protein FliG, middle domain AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 Pfam PF14842 FliG N-terminal domain 5 104 4.3E-29 T 06-07-2017 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 Gene3D G3DSA:1.10.220.30 7 72 1.7E-14 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 Pfam PF01706 FliG C-terminal domain 219 324 8.0E-38 T 06-07-2017 IPR023087 Flagellar motor switch protein FliG, C-terminal AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 3 332 8.1E-136 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 Gene3D G3DSA:1.10.220.30 195 331 2.9E-40 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 Gene3D G3DSA:1.10.220.30 75 184 3.2E-28 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 PIRSF PIRSF003161 1 332 1.4E-115 T 06-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM402_RS09805 91787d634b612ce94920e5f3f09cc9f9 332 SUPERFAMILY SSF48029 6 105 2.38E-19 T 06-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM402_RS18965 4eb56842c5eb27b2e5d9834afe30f618 87 Gene3D G3DSA:1.10.287.1040 14 83 7.2E-28 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM402_RS18965 4eb56842c5eb27b2e5d9834afe30f618 87 Pfam PF02609 Exonuclease VII small subunit 18 68 3.6E-20 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM402_RS18965 4eb56842c5eb27b2e5d9834afe30f618 87 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 17 59 3.0E-12 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM402_RS18965 4eb56842c5eb27b2e5d9834afe30f618 87 SUPERFAMILY SSF116842 12 80 2.35E-21 T 06-07-2017 AM402_RS18965 4eb56842c5eb27b2e5d9834afe30f618 87 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 17 73 2.3E-23 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM402_RS18965 4eb56842c5eb27b2e5d9834afe30f618 87 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 17 77 16.403 T 06-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM402_RS00585 800730d260bb0af49a25d7bba50c16a5 245 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 241 1.2E-38 T 06-07-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS00585 800730d260bb0af49a25d7bba50c16a5 245 Gene3D G3DSA:3.40.50.10090 147 244 9.0E-9 T 06-07-2017 AM402_RS00585 800730d260bb0af49a25d7bba50c16a5 245 Gene3D G3DSA:3.40.50.10090 30 146 9.6E-15 T 06-07-2017 AM402_RS00585 800730d260bb0af49a25d7bba50c16a5 245 SUPERFAMILY SSF69618 1 244 1.11E-55 T 06-07-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS04430 5c1c7ef510cef987fbe5a791358bf5f2 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 2.2E-28 T 06-07-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AM402_RS04430 5c1c7ef510cef987fbe5a791358bf5f2 313 Gene3D G3DSA:3.40.50.1220 185 311 2.5E-46 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS04430 5c1c7ef510cef987fbe5a791358bf5f2 313 SMART SM00893 8 189 2.2E-8 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM402_RS04430 5c1c7ef510cef987fbe5a791358bf5f2 313 PIRSF PIRSF000089 7 313 2.9E-75 T 06-07-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AM402_RS04430 5c1c7ef510cef987fbe5a791358bf5f2 313 Pfam PF01012 Electron transfer flavoprotein domain 21 164 8.0E-16 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM402_RS04430 5c1c7ef510cef987fbe5a791358bf5f2 313 SUPERFAMILY SSF52402 8 182 4.88E-19 T 06-07-2017 AM402_RS04430 5c1c7ef510cef987fbe5a791358bf5f2 313 SUPERFAMILY SSF52467 188 311 2.32E-39 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS04430 5c1c7ef510cef987fbe5a791358bf5f2 313 Gene3D G3DSA:3.40.50.620 8 155 2.1E-23 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 90 105 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 35 444 1.7E-191 T 06-07-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 SUPERFAMILY SSF52540 27 243 8.65E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 Gene3D G3DSA:2.40.30.10 253 368 7.8E-16 T 06-07-2017 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 Pfam PF00009 Elongation factor Tu GTP binding domain 35 221 1.2E-41 T 06-07-2017 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 26 485 50.975 T 06-07-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 Gene3D G3DSA:3.40.50.300 25 241 2.5E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 41 220 2.3E-12 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 SUPERFAMILY SSF50465 343 445 1.15E-26 T 06-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 SUPERFAMILY SSF50447 252 338 4.42E-22 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 PRINTS PR00315 GTP-binding elongation factor signature 133 144 4.4E-12 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 PRINTS PR00315 GTP-binding elongation factor signature 97 105 4.4E-12 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 PRINTS PR00315 GTP-binding elongation factor signature 117 127 4.4E-12 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 PRINTS PR00315 GTP-binding elongation factor signature 36 49 4.4E-12 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS06470 03e503d83c2b2fe36775b46d8d063278 485 PRINTS PR00315 GTP-binding elongation factor signature 170 179 4.4E-12 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS08500 adecc076f50fb20185998f502e0a8a1b 336 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 51 240 1.0E-37 T 06-07-2017 AM402_RS08500 adecc076f50fb20185998f502e0a8a1b 336 Gene3D G3DSA:1.10.532.10 158 229 2.7E-5 T 06-07-2017 IPR013799 STAT transcription factor, protein interaction GO:0006355|GO:0007165 AM402_RS08500 adecc076f50fb20185998f502e0a8a1b 336 Pfam PF13942 YfhG lipoprotein 76 243 4.3E-63 T 06-07-2017 IPR025262 Quorum-sensing regulator protein G AM402_RS19045 ecbde5101055a0e7ba1deb6d0f60c71d 615 Gene3D G3DSA:1.20.1640.10 443 611 4.7E-25 T 06-07-2017 AM402_RS19045 ecbde5101055a0e7ba1deb6d0f60c71d 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 9.9E-38 T 06-07-2017 IPR027398 SecD export protein N-terminal TM domain AM402_RS19045 ecbde5101055a0e7ba1deb6d0f60c71d 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 1.9E-150 T 06-07-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM402_RS19045 ecbde5101055a0e7ba1deb6d0f60c71d 615 SUPERFAMILY SSF82866 410 606 9.02E-42 T 06-07-2017 AM402_RS19045 ecbde5101055a0e7ba1deb6d0f60c71d 615 Pfam PF07549 SecD/SecF GG Motif 116 139 4.6E-6 T 06-07-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM402_RS19045 ecbde5101055a0e7ba1deb6d0f60c71d 615 Pfam PF02355 Protein export membrane protein 433 601 1.2E-15 T 06-07-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM402_RS19045 ecbde5101055a0e7ba1deb6d0f60c71d 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 50.846 T 06-07-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM402_RS19045 ecbde5101055a0e7ba1deb6d0f60c71d 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 4.1E-84 T 06-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 5.9E-16 T 06-07-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Gene3D G3DSA:3.40.50.720 1 112 2.1E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 5.8E-70 T 06-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Gene3D G3DSA:3.40.1010.10 215 331 1.4E-44 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 7.1E-47 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 06-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Gene3D G3DSA:3.30.950.10 337 456 5.4E-44 T 06-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Pfam PF13241 Putative NAD(P)-binding 6 115 2.1E-27 T 06-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Gene3D G3DSA:1.10.8.210 150 211 7.4E-18 T 06-07-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 SUPERFAMILY SSF53790 211 454 2.49E-76 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 2.0E-90 T 06-07-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 SUPERFAMILY SSF75615 114 199 4.84E-26 T 06-07-2017 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 SUPERFAMILY SSF51735 1 112 2.09E-24 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 PIRSF PIRSF036426 1 460 1.8E-197 T 06-07-2017 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Gene3D G3DSA:3.30.160.110 113 148 4.1E-18 T 06-07-2017 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Pfam PF14824 Sirohaem biosynthesis protein central 121 145 3.4E-7 T 06-07-2017 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS10935 57fc7cc2de585baa22a0285189150e3f 460 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 49.471 T 06-07-2017 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM402_RS06220 d031e1ddc9d6e4a47d3c718dcdfbbc95 147 Gene3D G3DSA:3.40.50.360 1 146 7.3E-30 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS06220 d031e1ddc9d6e4a47d3c718dcdfbbc95 147 Pfam PF00258 Flavodoxin 6 127 9.9E-20 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM402_RS06220 d031e1ddc9d6e4a47d3c718dcdfbbc95 147 SUPERFAMILY SSF52218 1 146 7.38E-36 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS00925 fa2d84e77c45e24f23bd2703346c0679 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.2E-44 T 06-07-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00925 fa2d84e77c45e24f23bd2703346c0679 117 SUPERFAMILY SSF53137 3 115 2.4E-54 T 06-07-2017 AM402_RS00925 fa2d84e77c45e24f23bd2703346c0679 117 Gene3D G3DSA:3.30.420.100 24 117 2.0E-37 T 06-07-2017 AM402_RS00925 fa2d84e77c45e24f23bd2703346c0679 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 4.8E-43 T 06-07-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00925 fa2d84e77c45e24f23bd2703346c0679 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.036 T 06-07-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS08730 71d3c748caeec2f4b38e1c9456f2caab 317 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 06-07-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM402_RS08730 71d3c748caeec2f4b38e1c9456f2caab 317 Gene3D G3DSA:3.40.50.1100 36 131 4.9E-38 T 06-07-2017 AM402_RS08730 71d3c748caeec2f4b38e1c9456f2caab 317 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 5.2E-70 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS08730 71d3c748caeec2f4b38e1c9456f2caab 317 SUPERFAMILY SSF53686 3 312 1.7E-97 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS08730 71d3c748caeec2f4b38e1c9456f2caab 317 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 7.5E-146 T 06-07-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM402_RS08730 71d3c748caeec2f4b38e1c9456f2caab 317 Gene3D G3DSA:3.40.50.1100 132 313 2.3E-74 T 06-07-2017 AM402_RS08730 71d3c748caeec2f4b38e1c9456f2caab 317 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 311 2.5E-137 T 06-07-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM402_RS17410 a905c3f6562cbcf3287b4e3692ae0ce6 562 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 440 550 2.8E-17 T 06-07-2017 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal AM402_RS17410 a905c3f6562cbcf3287b4e3692ae0ce6 562 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 37 247 7.2E-57 T 06-07-2017 IPR022391 Integrating conjugative element relaxase, PFGI-1 class AM402_RS17410 a905c3f6562cbcf3287b4e3692ae0ce6 562 Gene3D G3DSA:2.40.10.200 456 561 4.3E-12 T 06-07-2017 AM402_RS17410 a905c3f6562cbcf3287b4e3692ae0ce6 562 Pfam PF07514 Putative helicase 37 247 4.7E-32 T 06-07-2017 IPR011119 Uncharacterised domain, helicase/relaxase, putative AM402_RS17410 a905c3f6562cbcf3287b4e3692ae0ce6 562 SUPERFAMILY SSF46785 436 559 1.01E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 SUPERFAMILY SSF54292 42 125 5.12E-22 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 PIRSF PIRSF000044 1 408 1.2E-222 T 06-07-2017 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 Gene3D G3DSA:3.10.20.30 41 124 7.4E-22 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 1.6E-230 T 06-07-2017 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 387 7.6E-17 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 64.108 T 06-07-2017 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 Gene3D G3DSA:2.40.30.10 125 265 1.5E-62 T 06-07-2017 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 SUPERFAMILY SSF63380 106 273 2.79E-37 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 Pfam PF00970 Oxidoreductase FAD-binding domain 205 267 1.3E-9 T 06-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 Gene3D G3DSA:3.40.50.80 270 407 1.7E-41 T 06-07-2017 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 SUPERFAMILY SSF52343 256 403 4.85E-37 T 06-07-2017 AM402_RS17230 80a7a30059364dd2586ba912af3b44c6 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 39 115 2.9E-12 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 Pfam PF00072 Response regulator receiver domain 13 124 2.0E-28 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 SUPERFAMILY SSF46894 151 217 1.46E-20 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 SUPERFAMILY SSF52172 10 141 1.12E-34 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 9.3E-23 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 1.3E-14 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 1.3E-14 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 1.3E-14 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 SMART SM00421 157 214 8.9E-25 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 Gene3D G3DSA:1.10.10.10 159 218 7.2E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 SMART SM00448 11 124 9.2E-34 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS20180 014d33fae349a4f5dec80bf93831a1ef 220 Gene3D G3DSA:3.40.50.2300 10 158 9.3E-38 T 06-07-2017 AM402_RS08560 a82ee57426dee61776e98f4687cf8e73 164 SUPERFAMILY SSF46785 2 133 1.04E-35 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS08560 a82ee57426dee61776e98f4687cf8e73 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 2.8E-45 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type AM402_RS08560 a82ee57426dee61776e98f4687cf8e73 164 Gene3D G3DSA:1.10.10.10 1 135 3.4E-30 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS08560 a82ee57426dee61776e98f4687cf8e73 164 Pfam PF02082 Transcriptional regulator 1 83 1.7E-26 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type AM402_RS08560 a82ee57426dee61776e98f4687cf8e73 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 135 8.5E-66 T 06-07-2017 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AM402_RS14295 1379af82c9fa3da2444aabd0a7509daa 285 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 43 274 59.353 T 06-07-2017 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 AM402_RS14295 1379af82c9fa3da2444aabd0a7509daa 285 Gene3D G3DSA:3.40.50.1220 108 151 2.5E-41 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS14295 1379af82c9fa3da2444aabd0a7509daa 285 Gene3D G3DSA:3.40.50.1220 41 58 2.5E-41 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS14295 1379af82c9fa3da2444aabd0a7509daa 285 Gene3D G3DSA:3.40.50.1220 203 268 2.5E-41 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS14295 1379af82c9fa3da2444aabd0a7509daa 285 Gene3D G3DSA:3.30.1600.10 152 196 7.4E-27 T 06-07-2017 IPR026591 Sirtuin family, catalytic core small domain AM402_RS14295 1379af82c9fa3da2444aabd0a7509daa 285 Gene3D G3DSA:3.30.1600.10 59 98 7.4E-27 T 06-07-2017 IPR026591 Sirtuin family, catalytic core small domain AM402_RS14295 1379af82c9fa3da2444aabd0a7509daa 285 SUPERFAMILY SSF52467 41 276 7.92E-74 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS14295 1379af82c9fa3da2444aabd0a7509daa 285 Pfam PF02146 Sir2 family 50 224 1.4E-51 T 06-07-2017 IPR003000 Sirtuin family GO:0070403 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 PIRSF PIRSF036506 1 660 0.0 T 06-07-2017 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 SUPERFAMILY SSF53328 1 200 6.67E-59 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 SUPERFAMILY SSF51735 317 650 1.48E-70 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.9E-45 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 Gene3D G3DSA:3.40.50.720 306 553 1.3E-41 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 Gene3D G3DSA:3.40.50.170 1 199 1.8E-54 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 Pfam PF00551 Formyl transferase 25 175 4.3E-28 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 Gene3D G3DSA:3.90.25.10 570 640 3.8E-44 T 06-07-2017 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 SUPERFAMILY SSF50486 204 302 6.12E-25 T 06-07-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 Gene3D G3DSA:3.10.25.10 204 302 1.6E-22 T 06-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 Pfam PF02911 Formyl transferase, C-terminal domain 204 289 1.1E-18 T 06-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS13340 b5f4f683b3bc147a1affaef5f2fb9e4e 660 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.581 T 06-07-2017 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 AM402_RS19480 cfa2c724a95898dd6a8035f39f826125 569 Pfam PF06472 ABC transporter transmembrane region 2 8 292 2.5E-45 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS19480 cfa2c724a95898dd6a8035f39f826125 569 SUPERFAMILY SSF90123 19 340 7.72E-16 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS19480 cfa2c724a95898dd6a8035f39f826125 569 SUPERFAMILY SSF52540 364 552 2.73E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19480 cfa2c724a95898dd6a8035f39f826125 569 Gene3D G3DSA:1.20.1560.10 23 340 1.0E-8 T 06-07-2017 AM402_RS19480 cfa2c724a95898dd6a8035f39f826125 569 SMART SM00382 385 555 6.2E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS19480 cfa2c724a95898dd6a8035f39f826125 569 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS19480 cfa2c724a95898dd6a8035f39f826125 569 Pfam PF00005 ABC transporter 377 509 2.0E-21 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS19480 cfa2c724a95898dd6a8035f39f826125 569 Gene3D G3DSA:3.40.50.300 366 552 9.8E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02750 eafe0658b300c9cfc43bef36ee3d09a4 232 SUPERFAMILY SSF51366 13 224 6.83E-52 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM402_RS02750 eafe0658b300c9cfc43bef36ee3d09a4 232 Gene3D G3DSA:3.20.20.70 6 225 4.5E-86 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS02750 eafe0658b300c9cfc43bef36ee3d09a4 232 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 225 2.6E-84 T 06-07-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AM402_RS02750 eafe0658b300c9cfc43bef36ee3d09a4 232 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 36.275 T 06-07-2017 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 152 1.6E-62 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 320 48.61 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 SUPERFAMILY SSF52096 6 319 2.3E-100 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 320 2.1E-154 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 Gene3D G3DSA:3.90.226.10 58 281 1.2E-48 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 92 103 7.4E-44 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 173 186 7.4E-44 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 201 210 7.4E-44 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 117 135 7.4E-44 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 157 170 7.4E-44 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS12460 b24f07d764a0ca9fafdf324f7265da56 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 138 154 7.4E-44 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 SUPERFAMILY SSF48452 212 262 1.52E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 SUPERFAMILY SSF48452 65 172 1.52E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 SUPERFAMILY SSF81901 433 668 3.66E-12 T 06-07-2017 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 Gene3D G3DSA:1.25.40.10 533 668 1.4E-11 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 Gene3D G3DSA:1.25.40.10 280 367 9.9E-14 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 SUPERFAMILY SSF48452 218 364 2.09E-18 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 732 1071 1.0E-119 T 06-07-2017 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 Gene3D G3DSA:1.25.40.10 428 499 1.3E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 SMART SM00028 532 565 1.7 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 SMART SM00028 229 262 14.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 SMART SM00028 277 310 140.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 SMART SM00028 311 344 3.3E-5 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 Gene3D G3DSA:1.25.40.10 215 265 5.9E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 Gene3D G3DSA:1.25.40.10 63 171 5.9E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS07290 1c55d1bfd86c4de87b68ff53f720e4cc 1091 Pfam PF14559 Tetratricopeptide repeat 288 351 1.5E-6 T 06-07-2017 AM402_RS03520 c43dd51a5cfb9bc9b7b0b7c9bd703b80 135 SUPERFAMILY SSF82784 1 131 1.83E-41 T 06-07-2017 IPR003718 OsmC/Ohr family AM402_RS03520 c43dd51a5cfb9bc9b7b0b7c9bd703b80 135 Gene3D G3DSA:3.30.300.20 35 132 5.5E-42 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta AM402_RS03520 c43dd51a5cfb9bc9b7b0b7c9bd703b80 135 Pfam PF02566 OsmC-like protein 30 127 6.8E-18 T 06-07-2017 IPR003718 OsmC/Ohr family AM402_RS03520 c43dd51a5cfb9bc9b7b0b7c9bd703b80 135 Gene3D G3DSA:2.20.25.10 1 34 3.3E-18 T 06-07-2017 AM402_RS19260 2f8809c8395ea1cc1b257cb56f553548 142 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 2.0E-65 T 06-07-2017 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 AM402_RS19260 2f8809c8395ea1cc1b257cb56f553548 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 1.1E-28 T 06-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 Gene3D G3DSA:3.40.50.150 3 58 9.1E-42 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 Gene3D G3DSA:3.40.50.150 165 270 9.1E-42 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 SUPERFAMILY SSF53335 4 268 4.26E-57 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 180 192 2.3E-14 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 2.3E-14 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 2.3E-14 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 2.3E-14 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 Gene3D G3DSA:1.10.1020.10 59 161 2.9E-28 T 06-07-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 PIRSF PIRSF000398 1 274 4.6E-58 T 06-07-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 4 268 1.1E-70 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS01510 a28e2e9fdb6c572edb2c499d140ee799 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 254 4.0E-54 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS00530 780800c4bc909fa77d201751cca7710b 297 SUPERFAMILY SSF103481 189 285 1.2E-8 T 06-07-2017 AM402_RS00530 780800c4bc909fa77d201751cca7710b 297 TIGRFAM TIGR00688 rarD: protein RarD 8 260 7.8E-97 T 06-07-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AM402_RS00530 780800c4bc909fa77d201751cca7710b 297 Pfam PF00892 EamA-like transporter family 8 142 4.1E-15 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS00530 780800c4bc909fa77d201751cca7710b 297 SUPERFAMILY SSF103481 42 146 3.4E-12 T 06-07-2017 AM402_RS15585 e2226168183d845316427e2fb7c41121 244 SMART SM00079 24 244 2.9E-4 T 06-07-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM402_RS15585 e2226168183d845316427e2fb7c41121 244 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 06-07-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM402_RS15585 e2226168183d845316427e2fb7c41121 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 1.7E-72 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM402_RS15585 e2226168183d845316427e2fb7c41121 244 SMART SM00062 24 244 9.4E-87 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM402_RS15585 e2226168183d845316427e2fb7c41121 244 SUPERFAMILY SSF53850 1 243 1.03E-73 T 06-07-2017 AM402_RS15585 e2226168183d845316427e2fb7c41121 244 Gene3D G3DSA:3.40.190.10 131 203 1.7E-28 T 06-07-2017 AM402_RS15585 e2226168183d845316427e2fb7c41121 244 Gene3D G3DSA:3.40.190.10 12 130 4.4E-46 T 06-07-2017 AM402_RS15585 e2226168183d845316427e2fb7c41121 244 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 2 243 3.4E-89 T 06-07-2017 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 AM402_RS12665 01eeeaef4e46321f4ae6d04295983bd7 330 SUPERFAMILY SSF56349 145 328 2.12E-47 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS12665 01eeeaef4e46321f4ae6d04295983bd7 330 Gene3D G3DSA:1.10.150.130 43 111 9.5E-4 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS12665 01eeeaef4e46321f4ae6d04295983bd7 330 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 43 111 4.4E-6 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS12665 01eeeaef4e46321f4ae6d04295983bd7 330 Gene3D G3DSA:1.10.443.10 145 325 4.8E-44 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS12665 01eeeaef4e46321f4ae6d04295983bd7 330 Pfam PF00589 Phage integrase family 146 314 6.2E-33 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS21735 60c47a0b6222b02df7207b45978d9682 1204 Pfam PF07916 TraG-like protein, N-terminal region 6 466 6.8E-100 T 06-07-2017 IPR012931 TraG-like, N-terminal AM402_RS03095 49727c1149d5b175ce215ea8d95de0d8 382 SUPERFAMILY SSF103025 6 280 3.4E-50 T 06-07-2017 AM402_RS03095 49727c1149d5b175ce215ea8d95de0d8 382 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 235 1.4E-33 T 06-07-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal AM402_RS03095 49727c1149d5b175ce215ea8d95de0d8 382 PIRSF PIRSF006487 1 372 6.0E-50 T 06-07-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM402_RS03095 49727c1149d5b175ce215ea8d95de0d8 382 Gene3D G3DSA:3.30.1360.120 6 48 1.3E-19 T 06-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM402_RS03095 49727c1149d5b175ce215ea8d95de0d8 382 Gene3D G3DSA:3.30.1360.120 144 234 1.3E-19 T 06-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM402_RS03095 49727c1149d5b175ce215ea8d95de0d8 382 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 338 3.4E-11 T 06-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM402_RS03095 49727c1149d5b175ce215ea8d95de0d8 382 Gene3D G3DSA:3.30.70.1400 49 125 2.0E-14 T 06-07-2017 AM402_RS03095 49727c1149d5b175ce215ea8d95de0d8 382 Gene3D G3DSA:2.40.30.110 279 346 8.0E-4 T 06-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM402_RS11200 8d27e45d78317c5d045c0cc2d558adf0 74 Gene3D G3DSA:2.10.70.10 36 74 6.9E-18 T 06-07-2017 AM402_RS11200 8d27e45d78317c5d045c0cc2d558adf0 74 Pfam PF10636 Hemin uptake protein hemP 39 74 3.5E-16 T 06-07-2017 IPR019600 Hemin uptake protein HemP AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 Pfam PF08351 Domain of unknown function (DUF1726) 61 147 2.2E-8 T 06-07-2017 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 Gene3D G3DSA:3.40.50.300 157 285 5.5E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 Pfam PF13718 GNAT acetyltransferase 2 480 534 8.9E-9 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 SUPERFAMILY SSF55729 354 417 9.53E-14 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 SUPERFAMILY SSF55729 453 514 9.53E-14 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 Pfam PF17176 tRNA-binding domain 538 654 4.3E-26 T 06-07-2017 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 Pfam PF05127 Helicase 195 339 7.1E-38 T 06-07-2017 IPR007807 Helicase domain Reactome: R-HSA-6790901 AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 Gene3D G3DSA:3.40.630.30 355 416 1.0E-13 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 Gene3D G3DSA:3.40.630.30 454 514 1.0E-13 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 17 651 47.05 T 06-07-2017 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 AM402_RS10210 32fe68fe9afb1da62313fabccbe13aad 683 SUPERFAMILY SSF52540 170 287 6.16E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05135 adbd431e731e64dacbee5e2837bf0674 325 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 7.9E-26 T 06-07-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AM402_RS05135 adbd431e731e64dacbee5e2837bf0674 325 SUPERFAMILY SSF56784 111 317 4.4E-49 T 06-07-2017 IPR023214 HAD-like domain AM402_RS05135 adbd431e731e64dacbee5e2837bf0674 325 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 99 316 4.8E-87 T 06-07-2017 AM402_RS05135 adbd431e731e64dacbee5e2837bf0674 325 Gene3D G3DSA:1.10.150.210 123 174 1.0E-26 T 06-07-2017 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AM402_RS05135 adbd431e731e64dacbee5e2837bf0674 325 Pfam PF12710 haloacid dehalogenase-like hydrolase 151 282 1.1E-15 T 06-07-2017 AM402_RS05135 adbd431e731e64dacbee5e2837bf0674 325 Gene3D G3DSA:3.40.50.1000 175 304 2.4E-38 T 06-07-2017 IPR023214 HAD-like domain AM402_RS09245 336cdc0603c9ec4707e531346a49053b 92 Gene3D G3DSA:3.10.20.30 3 89 2.4E-19 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS09245 336cdc0603c9ec4707e531346a49053b 92 SUPERFAMILY SSF54292 3 89 2.1E-20 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS09245 336cdc0603c9ec4707e531346a49053b 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 06-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM402_RS09245 336cdc0603c9ec4707e531346a49053b 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 18 81 9.3E-11 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.6E-74 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 SUPERFAMILY SSF50615 10 94 1.71E-25 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.0E-46 T 06-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 SUPERFAMILY SSF47917 383 511 3.14E-46 T 06-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 Gene3D G3DSA:3.40.50.300 94 382 1.2E-113 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 Gene3D G3DSA:2.40.30.20 1 93 3.0E-29 T 06-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 7.1E-262 T 06-07-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 Gene3D G3DSA:1.20.150.20 383 510 2.1E-49 T 06-07-2017 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.287 T 06-07-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 7.9E-13 T 06-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS02295 9ca5214ea94d8b3c0ce408fc8ef90148 513 SUPERFAMILY SSF52540 96 381 4.25E-95 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 SUPERFAMILY SSF53850 93 298 1.32E-34 T 06-07-2017 AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 Gene3D G3DSA:3.40.190.10 175 270 8.9E-28 T 06-07-2017 AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.4E-24 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 Gene3D G3DSA:3.40.190.10 90 174 4.4E-24 T 06-07-2017 AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.9E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.9E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.9E-10 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 SUPERFAMILY SSF46785 4 87 4.79E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 Gene3D G3DSA:1.10.10.10 4 87 1.1E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12235 1c1b7f557463e53a96b2fdf35a872375 304 Pfam PF03466 LysR substrate binding domain 91 296 2.0E-38 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS11745 8f2ba9adef06dd9c4c8d334386119e95 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 6.0E-24 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS11745 8f2ba9adef06dd9c4c8d334386119e95 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 5.0E-11 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS11745 8f2ba9adef06dd9c4c8d334386119e95 402 Pfam PF12323 Helix-turn-helix domain 1 48 4.8E-14 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS11745 8f2ba9adef06dd9c4c8d334386119e95 402 Pfam PF01385 Probable transposase 163 275 2.0E-29 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 SUPERFAMILY SSF54719 94 204 6.55E-46 T 06-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 PIRSF PIRSF000349 1 207 9.7E-81 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.2E-31 T 06-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 202 2.8E-41 T 06-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 SUPERFAMILY SSF46609 1 90 4.98E-36 T 06-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 06-07-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 Gene3D G3DSA:1.10.287.990 20 90 2.0E-31 T 06-07-2017 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 3.5E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 3.5E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 3.5E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.5E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS02435 e61f50b28d3ed1e1b5a3539b4eb1c556 207 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.5E-27 T 06-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AM402_RS12850 56c079a946443f4c7eee4f843a6a1d51 804 SUPERFAMILY SSF141729 51 158 3.53E-12 T 06-07-2017 AM402_RS12850 56c079a946443f4c7eee4f843a6a1d51 804 Pfam PF13953 PapC C-terminal domain 727 787 2.1E-12 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS12850 56c079a946443f4c7eee4f843a6a1d51 804 Pfam PF00577 Outer membrane usher protein 180 715 1.4E-93 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS12850 56c079a946443f4c7eee4f843a6a1d51 804 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 289 299 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site AM402_RS12850 56c079a946443f4c7eee4f843a6a1d51 804 Pfam PF13954 PapC N-terminal domain 50 165 1.6E-15 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS13900 04b9b24495a207598bdd4a6466e9a213 341 Pfam PF06147 Protein of unknown function (DUF968) 136 338 1.2E-71 T 06-07-2017 IPR010373 Protein of unknown function DUF968 AM402_RS18010 97b0888b72c847a4a712184426b14fd3 94 SUPERFAMILY SSF47413 18 82 1.61E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18010 97b0888b72c847a4a712184426b14fd3 94 Gene3D G3DSA:1.10.260.40 13 81 1.3E-19 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18010 97b0888b72c847a4a712184426b14fd3 94 Pfam PF01381 Helix-turn-helix 25 79 2.7E-15 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS18010 97b0888b72c847a4a712184426b14fd3 94 SMART SM00530 24 79 1.1E-14 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS03390 8042988db7362254d97a2ab291dfca14 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 2.0E-30 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03390 8042988db7362254d97a2ab291dfca14 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 5.1E-14 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM402_RS03390 8042988db7362254d97a2ab291dfca14 300 SUPERFAMILY SSF161098 93 280 1.03E-29 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03390 8042988db7362254d97a2ab291dfca14 300 Gene3D G3DSA:1.10.3720.10 89 296 8.3E-30 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS21080 fae8000692d0fdaa6fe70e68c030813e 393 SUPERFAMILY SSF109709 111 217 1.26E-23 T 06-07-2017 AM402_RS21080 fae8000692d0fdaa6fe70e68c030813e 393 SUPERFAMILY SSF110849 26 154 2.96E-17 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS21080 fae8000692d0fdaa6fe70e68c030813e 393 SMART SM00470 25 115 3.7E-16 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS21080 fae8000692d0fdaa6fe70e68c030813e 393 Pfam PF08535 KorB domain 135 221 1.6E-32 T 06-07-2017 IPR013741 Transcriptional repressor protein KorB AM402_RS21080 fae8000692d0fdaa6fe70e68c030813e 393 Pfam PF02195 ParB-like nuclease domain 27 101 1.8E-14 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS21080 fae8000692d0fdaa6fe70e68c030813e 393 Gene3D G3DSA:3.90.1530.10 19 121 1.2E-18 T 06-07-2017 AM402_RS21080 fae8000692d0fdaa6fe70e68c030813e 393 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 35 193 1.1E-31 T 06-07-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 SUPERFAMILY SSF118116 480 658 2.35E-32 T 06-07-2017 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 06-07-2017 IPR014762 DNA mismatch repair, conserved site AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 SUPERFAMILY SSF55874 2 207 9.95E-57 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 4.6E-13 T 06-07-2017 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 Pfam PF08676 MutL C terminal dimerisation domain 481 609 5.8E-21 T 06-07-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 SMART SM01340 212 330 1.0E-51 T 06-07-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 3.2E-36 T 06-07-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.7E-102 T 06-07-2017 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 SUPERFAMILY SSF54211 191 330 3.72E-35 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 658 25.321 T 06-07-2017 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 Gene3D G3DSA:3.30.230.10 217 328 4.5E-37 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 SMART SM00853 484 619 3.3E-10 T 06-07-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM402_RS00405 6b1d1d0c61b3a92ee51df88d6f55a9ba 669 Gene3D G3DSA:3.30.565.10 2 210 2.2E-78 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS06640 a927fe0ce412de5a9d614fbb9869f295 301 Pfam PF03466 LysR substrate binding domain 89 296 4.9E-36 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS06640 a927fe0ce412de5a9d614fbb9869f295 301 SUPERFAMILY SSF53850 91 299 4.48E-37 T 06-07-2017 AM402_RS06640 a927fe0ce412de5a9d614fbb9869f295 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-16 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS06640 a927fe0ce412de5a9d614fbb9869f295 301 Gene3D G3DSA:1.10.10.10 2 82 8.5E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06640 a927fe0ce412de5a9d614fbb9869f295 301 Gene3D G3DSA:3.40.190.10 93 180 2.3E-16 T 06-07-2017 AM402_RS06640 a927fe0ce412de5a9d614fbb9869f295 301 SUPERFAMILY SSF46785 4 88 3.08E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06640 a927fe0ce412de5a9d614fbb9869f295 301 Gene3D G3DSA:3.40.190.10 181 263 2.2E-8 T 06-07-2017 AM402_RS10795 a21b2676c885457227660c36787051e0 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 06-07-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.2E-136 T 06-07-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 Gene3D G3DSA:3.40.50.720 1 158 1.2E-80 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10795 a21b2676c885457227660c36787051e0 331 SUPERFAMILY SSF55347 149 312 3.74E-80 T 06-07-2017 AM402_RS10795 a21b2676c885457227660c36787051e0 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 4.3E-70 T 06-07-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 2.8E-62 T 06-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 SUPERFAMILY SSF51735 3 166 2.35E-69 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10795 a21b2676c885457227660c36787051e0 331 SMART SM00846 3 150 1.6E-98 T 06-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 Gene3D G3DSA:3.30.360.10 159 314 3.2E-86 T 06-07-2017 AM402_RS10795 a21b2676c885457227660c36787051e0 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.4E-47 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.4E-47 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.4E-47 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.4E-47 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.4E-47 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS10795 a21b2676c885457227660c36787051e0 331 PIRSF PIRSF000149 1 331 1.6E-134 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS03010 25da2dd2991d0edeffa439c44f4305cd 192 Gene3D G3DSA:2.60.300.12 1 97 1.0E-18 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS03010 25da2dd2991d0edeffa439c44f4305cd 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 192 2.4E-99 T 06-07-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM402_RS03010 25da2dd2991d0edeffa439c44f4305cd 192 SUPERFAMILY SSF117916 95 184 1.87E-23 T 06-07-2017 AM402_RS03010 25da2dd2991d0edeffa439c44f4305cd 192 SUPERFAMILY SSF89360 1 97 1.96E-22 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS03010 25da2dd2991d0edeffa439c44f4305cd 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 178 2.0E-25 T 06-07-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM402_RS03010 25da2dd2991d0edeffa439c44f4305cd 192 Pfam PF01106 NifU-like domain 111 175 4.4E-19 T 06-07-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM402_RS03010 25da2dd2991d0edeffa439c44f4305cd 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 1.0E-13 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS03010 25da2dd2991d0edeffa439c44f4305cd 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 45.897 T 06-07-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM402_RS07945 cc0594c16ff3c93cacecfa7122c330c6 72 Pfam PF04606 Ogr/Delta-like zinc finger 4 49 1.4E-21 T 06-07-2017 IPR007684 Zinc finger, Ogr/Delta-type AM402_RS12245 27cfd577c9f95551a55cc0d97f339e7f 223 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 202 22.588 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM402_RS12245 27cfd577c9f95551a55cc0d97f339e7f 223 SUPERFAMILY SSF52540 1 204 2.18E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12245 27cfd577c9f95551a55cc0d97f339e7f 223 Pfam PF13500 AAA domain 4 200 6.2E-27 T 06-07-2017 AM402_RS12245 27cfd577c9f95551a55cc0d97f339e7f 223 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 169 7.7E-36 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM402_RS12245 27cfd577c9f95551a55cc0d97f339e7f 223 PIRSF PIRSF006755 1 221 1.2E-57 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM402_RS12245 27cfd577c9f95551a55cc0d97f339e7f 223 Gene3D G3DSA:3.40.50.300 2 208 2.7E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04975 8cf0a155a483596edd3ba80e63cae9c8 187 Gene3D G3DSA:2.60.40.1090 30 187 2.8E-20 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04975 8cf0a155a483596edd3ba80e63cae9c8 187 Pfam PF00419 Fimbrial protein 32 186 1.9E-10 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04975 8cf0a155a483596edd3ba80e63cae9c8 187 SUPERFAMILY SSF49401 30 187 2.54E-20 T 06-07-2017 IPR008966 Adhesion domain AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 540 1.0E-47 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 563 4.5E-202 T 06-07-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 SUPERFAMILY SSF52467 196 361 5.57E-57 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 Gene3D G3DSA:3.40.50.970 389 562 7.4E-65 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 SUPERFAMILY SSF52518 8 189 8.41E-61 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 203 335 1.9E-44 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 Gene3D G3DSA:3.40.50.1220 196 388 6.5E-66 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 180 2.9E-58 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 06-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 Gene3D G3DSA:3.40.50.970 12 188 3.5E-72 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS20410 66dcc80bcdc8f1b3285b25b92de9df21 564 SUPERFAMILY SSF52518 375 562 7.51E-62 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS04255 a55f7f6b4a723329e957732a23a16d19 343 SUPERFAMILY SSF53807 37 298 1.45E-42 T 06-07-2017 AM402_RS04255 a55f7f6b4a723329e957732a23a16d19 343 Gene3D G3DSA:3.40.50.1980 46 171 3.4E-14 T 06-07-2017 AM402_RS04255 a55f7f6b4a723329e957732a23a16d19 343 Gene3D G3DSA:3.40.50.1980 191 307 4.9E-23 T 06-07-2017 AM402_RS04255 a55f7f6b4a723329e957732a23a16d19 343 Pfam PF01497 Periplasmic binding protein 49 279 9.8E-20 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM402_RS01925 797714d68279c903e4ae9d0e8aa0153d 85 Pfam PF01381 Helix-turn-helix 13 65 3.9E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS01925 797714d68279c903e4ae9d0e8aa0153d 85 SUPERFAMILY SSF47413 6 71 8.7E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS01925 797714d68279c903e4ae9d0e8aa0153d 85 Gene3D G3DSA:1.10.260.40 8 71 1.3E-11 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS01925 797714d68279c903e4ae9d0e8aa0153d 85 SMART SM00530 12 67 8.7E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 Gene3D G3DSA:3.90.230.10 179 432 1.2E-86 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 Gene3D G3DSA:3.40.350.10 2 178 1.6E-50 T 06-07-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 06-07-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 SUPERFAMILY SSF55920 175 433 9.29E-88 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 126 2.1E-34 T 06-07-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 Pfam PF00557 Metallopeptidase family M24 180 411 4.8E-65 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 2.8E-6 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 2.8E-6 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 SUPERFAMILY SSF53092 1 174 2.46E-51 T 06-07-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal AM402_RS07670 5f8e4f5f5bd0ca07fd844b588bfc4ce7 436 SMART SM01011 1 135 1.2E-54 T 06-07-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 SUPERFAMILY SSF52518 358 547 1.75E-65 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 Gene3D G3DSA:3.40.50.1220 184 342 4.3E-59 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 6.9E-49 T 06-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 Gene3D G3DSA:3.40.50.970 345 547 3.1E-72 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 Gene3D G3DSA:3.40.50.970 1 168 6.3E-70 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 547 1.9E-219 T 06-07-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 SUPERFAMILY SSF52467 182 342 3.07E-57 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 SUPERFAMILY SSF52518 1 175 4.59E-60 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 2.9E-44 T 06-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 06-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM402_RS00750 43e33f35269dbb9abe956c9d0269651e 549 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 9.6E-54 T 06-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 Gene3D G3DSA:2.60.40.360 23 137 3.3E-37 T 06-07-2017 IPR008962 PapD-like AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 PRINTS PR00969 Pili chaperone signature 68 89 1.2E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 PRINTS PR00969 Pili chaperone signature 23 32 1.2E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 PRINTS PR00969 Pili chaperone signature 119 134 1.2E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 PRINTS PR00969 Pili chaperone signature 155 170 1.2E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 PRINTS PR00969 Pili chaperone signature 96 113 1.2E-24 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 Gene3D G3DSA:2.60.40.1070 140 221 3.4E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 160 216 8.8E-12 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 137 1.4E-32 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 SUPERFAMILY SSF49584 140 219 2.75E-16 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS12785 c31f0282463fc98c12f062a56448cd9c 224 SUPERFAMILY SSF49354 18 137 1.28E-34 T 06-07-2017 IPR008962 PapD-like AM402_RS03400 2cc31177075e00b6876e307fd96f82bd 333 SUPERFAMILY SSF52540 13 261 2.18E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03400 2cc31177075e00b6876e307fd96f82bd 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 1.6E-18 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS03400 2cc31177075e00b6876e307fd96f82bd 333 SMART SM00382 47 239 1.7E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS03400 2cc31177075e00b6876e307fd96f82bd 333 Gene3D G3DSA:3.40.50.300 12 263 4.9E-78 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03400 2cc31177075e00b6876e307fd96f82bd 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 1.1E-24 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS03400 2cc31177075e00b6876e307fd96f82bd 333 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS03400 2cc31177075e00b6876e307fd96f82bd 333 Pfam PF00005 ABC transporter 38 189 3.5E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS01780 6fcd477c0dd6fb7bf82942b2f761c6f5 375 Pfam PF13439 Glycosyltransferase Family 4 17 173 1.9E-18 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM402_RS01780 6fcd477c0dd6fb7bf82942b2f761c6f5 375 SUPERFAMILY SSF53756 8 364 7.99E-75 T 06-07-2017 AM402_RS01780 6fcd477c0dd6fb7bf82942b2f761c6f5 375 Pfam PF00534 Glycosyl transferases group 1 180 343 3.4E-34 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS01780 6fcd477c0dd6fb7bf82942b2f761c6f5 375 Gene3D G3DSA:3.40.50.2000 161 342 1.5E-28 T 06-07-2017 AM402_RS12270 4b927f9369517246bf6c776eec68637a 73 Pfam PF05433 Glycine zipper 2TM domain 34 71 2.4E-6 T 06-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 SUPERFAMILY SSF52540 42 354 1.73E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.578 T 06-07-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 Gene3D G3DSA:1.20.120.140 2 88 2.9E-35 T 06-07-2017 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 Gene3D G3DSA:1.10.260.30 329 432 1.4E-40 T 06-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 SMART SM00382 99 247 5.9E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.0E-21 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 Pfam PF02978 Signal peptide binding domain 329 427 4.7E-33 T 06-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 SUPERFAMILY SSF47446 298 431 1.2E-45 T 06-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 Gene3D G3DSA:3.40.50.300 95 297 2.1E-78 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 SMART SM00963 1 86 3.7E-35 T 06-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 6.2E-179 T 06-07-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 SMART SM00962 100 296 5.2E-117 T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS17085 8fd7ac810522a281ffd08965de6012ff 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 6.2E-75 T 06-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 546 675 1.2E-43 T 06-07-2017 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 SUPERFAMILY SSF47323 390 546 3.55E-46 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 6.4E-204 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 SUPERFAMILY SSF57770 142 176 5.1E-13 T 06-07-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 Pfam PF01588 Putative tRNA binding domain 579 672 3.5E-21 T 06-07-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 SUPERFAMILY SSF50249 569 674 4.9E-27 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 Pfam PF09334 tRNA synthetases class I (M) 9 396 9.5E-166 T 06-07-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 Gene3D G3DSA:1.10.730.10 380 534 2.1E-43 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 Gene3D G3DSA:2.20.28.20 145 176 2.7E-20 T 06-07-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 SUPERFAMILY SSF52374 176 387 2.55E-105 T 06-07-2017 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 SUPERFAMILY SSF52374 6 141 2.55E-105 T 06-07-2017 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 Gene3D G3DSA:3.40.50.620 183 379 1.5E-91 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 Gene3D G3DSA:3.40.50.620 7 144 1.5E-91 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.391 T 06-07-2017 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 8.7E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 8.7E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 8.7E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 8.7E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 8.7E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 8.7E-26 T 06-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM402_RS15745 89edfb49fefaa6cb03e74082a7eb5213 675 Gene3D G3DSA:2.40.50.140 566 675 1.5E-36 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 SUPERFAMILY SSF53098 3 157 2.66E-55 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 2.9E-79 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.9E-44 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.9E-44 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.9E-44 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.9E-44 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.9E-44 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 Gene3D G3DSA:3.30.420.10 3 156 2.1E-66 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 06-07-2017 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.5E-64 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM402_RS13040 3e7fbc3989329905c2ebdc55d35b52fc 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.893 T 06-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 SMART SM01003 4 137 4.7E-72 T 06-07-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 2.2E-75 T 06-07-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 06-07-2017 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 SUPERFAMILY SSF51735 137 312 6.18E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.0E-50 T 06-07-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 509 1.1E-289 T 06-07-2017 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 PIRSF PIRSF000203 1 508 5.7E-277 T 06-07-2017 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 SMART SM01002 146 311 5.4E-85 T 06-07-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 Gene3D G3DSA:3.50.50.60 177 193 1.0E-4 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 508 4.1E-35 T 06-07-2017 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 Gene3D G3DSA:3.40.50.1770 194 371 2.8E-46 T 06-07-2017 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 SUPERFAMILY SSF52283 1 168 7.48E-56 T 06-07-2017 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 Gene3D G3DSA:3.40.50.1770 2 176 4.8E-72 T 06-07-2017 AM402_RS12765 dcd83a138e21706575d4be1bec13d32b 509 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 06-07-2017 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 SUPERFAMILY SSF103473 3 388 4.05E-63 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 275 296 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 365 384 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 14 30 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 218 235 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 335 358 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 101 122 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 43 62 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 159 179 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 74 98 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 131 153 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 300 320 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 PRINTS PR01035 Tetracycline resistance protein signature 247 267 2.7E-131 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 Pfam PF07690 Major Facilitator Superfamily 8 351 3.4E-48 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 Gene3D G3DSA:1.20.1250.20 2 184 1.1E-38 T 06-07-2017 AM402_RS05680 1ac5bd338a17eda7ccc6fe0101b7d28d 398 Gene3D G3DSA:1.20.1250.20 209 389 9.3E-21 T 06-07-2017 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 Gene3D G3DSA:3.40.1190.20 4 306 8.2E-102 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 9.0E-116 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 Hamap MF_01987 Ribokinase [rbsK]. 4 303 26.476 T 06-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 1.2E-79 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 PRINTS PR00990 Ribokinase signature 107 120 4.2E-37 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 PRINTS PR00990 Ribokinase signature 35 54 4.2E-37 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 PRINTS PR00990 Ribokinase signature 8 29 4.2E-37 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 PRINTS PR00990 Ribokinase signature 175 190 4.2E-37 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 PRINTS PR00990 Ribokinase signature 219 230 4.2E-37 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 40 64 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 SUPERFAMILY SSF53613 4 304 3.9E-89 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS19000 e48b71990d3e7bb668dfef1a7e9bfce5 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS08440 feb48dca2d336b1ad2d2cf03d5a477e0 86 Gene3D G3DSA:3.30.70.20 4 74 7.1E-18 T 06-07-2017 AM402_RS08440 feb48dca2d336b1ad2d2cf03d5a477e0 86 SUPERFAMILY SSF54862 5 72 2.96E-18 T 06-07-2017 AM402_RS08440 feb48dca2d336b1ad2d2cf03d5a477e0 86 Pfam PF00037 4Fe-4S binding domain 6 25 1.6E-6 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS08440 feb48dca2d336b1ad2d2cf03d5a477e0 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS04525 ee91f3aeea0359088bd9451d0f6beca1 172 PIRSF PIRSF031551 1 170 2.0E-58 T 06-07-2017 IPR012550 Protein of unknown function DUF1706 AM402_RS04525 ee91f3aeea0359088bd9451d0f6beca1 172 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 1.3E-52 T 06-07-2017 IPR012550 Protein of unknown function DUF1706 AM402_RS20030 252921ff53d9a22f9c71b491f79703d7 138 Gene3D G3DSA:3.30.70.1290 2 137 3.5E-48 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS20030 252921ff53d9a22f9c71b491f79703d7 138 SMART SM01321 14 134 1.8E-41 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS20030 252921ff53d9a22f9c71b491f79703d7 138 Pfam PF01797 Transposase IS200 like 15 134 1.4E-39 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS20030 252921ff53d9a22f9c71b491f79703d7 138 SUPERFAMILY SSF143422 6 135 3.01E-46 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS14440 6652b206423a3194eea05cee47dccfd2 1173 SUPERFAMILY SSF50249 40 124 3.33E-21 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS14440 6652b206423a3194eea05cee47dccfd2 1173 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 5.0E-168 T 06-07-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM402_RS14440 6652b206423a3194eea05cee47dccfd2 1173 SMART SM00316 37 119 4.2E-13 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS14440 6652b206423a3194eea05cee47dccfd2 1173 Pfam PF00575 S1 RNA binding domain 36 118 1.1E-16 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS14440 6652b206423a3194eea05cee47dccfd2 1173 Hamap MF_00970 Ribonuclease E [rne]. 1 1157 35.901 T 06-07-2017 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AM402_RS14440 6652b206423a3194eea05cee47dccfd2 1173 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1131 1168 2.8E-15 T 06-07-2017 IPR021968 Polyribonucleotide phosphorylase C-terminal AM402_RS14440 6652b206423a3194eea05cee47dccfd2 1173 Pfam PF10150 Ribonuclease E/G family 121 391 1.3E-92 T 06-07-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM402_RS14440 6652b206423a3194eea05cee47dccfd2 1173 Gene3D G3DSA:2.40.50.140 31 124 5.6E-37 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS18380 b317f37ffff8981321be220084d70ab5 251 PIRSF PIRSF005457 1 251 7.0E-86 T 06-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM402_RS18380 b317f37ffff8981321be220084d70ab5 251 SMART SM00849 11 165 2.1E-34 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18380 b317f37ffff8981321be220084d70ab5 251 SUPERFAMILY SSF56281 1 251 1.7E-65 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18380 b317f37ffff8981321be220084d70ab5 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 2.1E-99 T 06-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM402_RS18380 b317f37ffff8981321be220084d70ab5 251 Gene3D G3DSA:3.60.15.10 5 251 8.8E-84 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18380 b317f37ffff8981321be220084d70ab5 251 Pfam PF00753 Metallo-beta-lactamase superfamily 14 165 1.0E-16 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS18380 b317f37ffff8981321be220084d70ab5 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 8.9E-23 T 06-07-2017 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM402_RS18380 b317f37ffff8981321be220084d70ab5 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 43.869 T 06-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 417 1.1E-149 T 06-07-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 SMART SM00766 451 576 2.5E-41 T 06-07-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 SUPERFAMILY SSF117023 449 579 4.32E-39 T 06-07-2017 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Gene3D G3DSA:3.90.980.10 116 240 6.3E-47 T 06-07-2017 IPR013264 DNA primase, catalytic core, N-terminal AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Gene3D G3DSA:1.20.50.20 368 423 1.5E-23 T 06-07-2017 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 SUPERFAMILY SSF56731 116 424 3.58E-113 T 06-07-2017 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Gene3D G3DSA:3.90.580.10 1 101 1.1E-40 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 PIRSF PIRSF002811 2 582 1.3E-145 T 06-07-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Pfam PF10410 DnaB-helicase binding domain of primase 369 420 6.1E-10 T 06-07-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 SMART SM00400 36 90 9.6E-38 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Pfam PF13155 Toprim-like 263 348 1.3E-14 T 06-07-2017 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 SMART SM00493 259 330 2.8E-20 T 06-07-2017 IPR006171 Toprim domain AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Hamap MF_00974 DNA primase [dnaG]. 4 577 29.892 T 06-07-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Pfam PF08278 DNA primase DnaG DnaB-binding 452 573 2.9E-31 T 06-07-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 SUPERFAMILY SSF57783 4 100 1.36E-36 T 06-07-2017 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 1.0E-43 T 06-07-2017 IPR013264 DNA primase, catalytic core, N-terminal AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Pfam PF01807 CHC2 zinc finger 6 100 1.1E-39 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Gene3D G3DSA:1.10.860.10 440 581 3.4E-47 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM402_RS05825 3bc523882a778744b455bfea899e8690 582 Gene3D G3DSA:3.40.1360.10 241 365 9.7E-47 T 06-07-2017 AM402_RS18820 ce3b37bf267acd585d774b08e9c8142d 595 SMART SM00382 371 556 2.0E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18820 ce3b37bf267acd585d774b08e9c8142d 595 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS18820 ce3b37bf267acd585d774b08e9c8142d 595 Pfam PF00664 ABC transporter transmembrane region 31 300 3.1E-39 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS18820 ce3b37bf267acd585d774b08e9c8142d 595 Gene3D G3DSA:1.20.1560.10 17 330 3.1E-69 T 06-07-2017 AM402_RS18820 ce3b37bf267acd585d774b08e9c8142d 595 Pfam PF00005 ABC transporter 362 510 3.7E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS18820 ce3b37bf267acd585d774b08e9c8142d 595 SUPERFAMILY SSF52540 338 581 4.09E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18820 ce3b37bf267acd585d774b08e9c8142d 595 SUPERFAMILY SSF90123 17 330 1.57E-66 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS18820 ce3b37bf267acd585d774b08e9c8142d 595 Gene3D G3DSA:3.40.50.300 347 587 4.8E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Gene3D G3DSA:3.30.54.20 131 187 1.9E-18 T 06-07-2017 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 1.1E-51 T 06-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 SUPERFAMILY SSF55186 63 241 8.24E-63 T 06-07-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Pfam PF02824 TGS domain 4 61 1.2E-11 T 06-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 SUPERFAMILY SSF52954 529 636 2.27E-33 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 SUPERFAMILY SSF81271 3 61 2.71E-16 T 06-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 SMART SM00863 170 219 8.8E-18 T 06-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Gene3D G3DSA:3.30.980.10 188 224 1.1E-40 T 06-07-2017 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Gene3D G3DSA:3.30.980.10 66 129 1.1E-40 T 06-07-2017 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 2.4E-54 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 2.4E-54 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 2.4E-54 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 2.4E-54 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 2.4E-54 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Pfam PF03129 Anticodon binding domain 541 630 1.3E-22 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Gene3D G3DSA:3.10.20.30 1 64 5.4E-24 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 2.4E-243 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Gene3D G3DSA:3.30.930.10 242 530 1.7E-121 T 06-07-2017 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 219 3.1E-13 T 06-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 SUPERFAMILY SSF55681 243 525 9.36E-97 T 06-07-2017 AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Gene3D G3DSA:3.40.50.800 532 640 1.1E-36 T 06-07-2017 IPR004154 Anticodon-binding AM402_RS13395 7b1840e9bdf9b472b4992cc5d5ef7ccb 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.223 T 06-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM402_RS07220 c69c9d1343ad6c716a65c8bfad9fd611 361 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 29 315 4.9E-49 T 06-07-2017 IPR029132 Choloylglycine hydrolase/NAAA C-terminal AM402_RS07220 c69c9d1343ad6c716a65c8bfad9fd611 361 Gene3D G3DSA:3.60.60.10 29 328 2.7E-106 T 06-07-2017 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 Reactome: R-HSA-1660662 AM402_RS07220 c69c9d1343ad6c716a65c8bfad9fd611 361 SUPERFAMILY SSF56235 29 325 2.01E-100 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 514 1.7E-256 T 06-07-2017 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 SUPERFAMILY SSF53686 15 362 2.1E-100 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 06-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 SUPERFAMILY SSF55021 336 425 3.05E-26 T 06-07-2017 AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 421 8.2E-27 T 06-07-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 431 514 2.3E-25 T 06-07-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 3.0E-76 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 Gene3D G3DSA:3.40.50.1100 80 334 9.8E-79 T 06-07-2017 AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 Gene3D G3DSA:3.40.1020.10 339 514 5.3E-57 T 06-07-2017 AM402_RS00730 3c7977a7a078870502ad247a22fde8bb 524 SUPERFAMILY SSF55021 422 514 6.64E-26 T 06-07-2017 AM402_RS07065 5e91f7b6af7959412ec6e622b470c8ef 193 Gene3D G3DSA:3.40.50.880 1 171 7.4E-40 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS07065 5e91f7b6af7959412ec6e622b470c8ef 193 Pfam PF01965 DJ-1/PfpI family 2 165 3.0E-30 T 06-07-2017 IPR002818 DJ-1/PfpI AM402_RS07065 5e91f7b6af7959412ec6e622b470c8ef 193 SUPERFAMILY SSF52317 1 172 1.02E-37 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS11140 03265a719f76414fcfe782d197306341 53 Pfam PF10617 Protein of unknown function (DUF2474) 14 51 2.4E-19 T 06-07-2017 IPR018895 Protein of unknown function DUF2474 AM402_RS00395 00f2581fb6488ef20eb04968263382cf 96 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 1.6E-29 T 06-07-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM402_RS00395 00f2581fb6488ef20eb04968263382cf 96 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 06-07-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM402_RS00395 00f2581fb6488ef20eb04968263382cf 96 Gene3D G3DSA:2.30.30.100 1 74 5.0E-38 T 06-07-2017 AM402_RS00395 00f2581fb6488ef20eb04968263382cf 96 SUPERFAMILY SSF50182 7 69 3.47E-24 T 06-07-2017 IPR010920 LSM domain AM402_RS06645 68ee8a3b50761f2841177509c9a26552 291 Gene3D G3DSA:2.60.120.10 7 258 3.8E-73 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS06645 68ee8a3b50761f2841177509c9a26552 291 SUPERFAMILY SSF51182 2 289 1.41E-78 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS06645 68ee8a3b50761f2841177509c9a26552 291 PIRSF PIRSF006232 2 290 3.8E-83 T 06-07-2017 IPR012093 Pirin AM402_RS06645 68ee8a3b50761f2841177509c9a26552 291 Pfam PF02678 Pirin 20 128 2.6E-32 T 06-07-2017 IPR003829 Pirin, N-terminal domain AM402_RS06645 68ee8a3b50761f2841177509c9a26552 291 Pfam PF05726 Pirin C-terminal cupin domain 183 285 4.9E-26 T 06-07-2017 IPR008778 Pirin, C-terminal domain AM402_RS18690 8f16838fdb56d87d6aa00a5a52a2579c 299 Gene3D G3DSA:3.30.360.10 147 252 3.5E-46 T 06-07-2017 AM402_RS18690 8f16838fdb56d87d6aa00a5a52a2579c 299 SUPERFAMILY SSF55347 121 252 1.63E-47 T 06-07-2017 AM402_RS18690 8f16838fdb56d87d6aa00a5a52a2579c 299 PIRSF PIRSF025648 2 299 3.4E-117 T 06-07-2017 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 AM402_RS18690 8f16838fdb56d87d6aa00a5a52a2579c 299 TIGRFAM TIGR01921 DAP-DH: diaminopimelate dehydrogenase 3 299 2.9E-107 T 06-07-2017 IPR010190 Diaminopimelate dehydrogenase, Ddh GO:0009089|GO:0047850 KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 AM402_RS18690 8f16838fdb56d87d6aa00a5a52a2579c 299 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 87 1.7E-6 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM402_RS18690 8f16838fdb56d87d6aa00a5a52a2579c 299 Pfam PF16654 Diaminopimelic acid dehydrogenase C-terminal domain 120 174 2.2E-12 T 06-07-2017 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942 AM402_RS18690 8f16838fdb56d87d6aa00a5a52a2579c 299 SUPERFAMILY SSF51735 4 137 1.22E-24 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18690 8f16838fdb56d87d6aa00a5a52a2579c 299 Gene3D G3DSA:3.40.50.720 5 146 1.9E-23 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS11435 c1c943490788a081922634866986d68e 184 Pfam PF14163 Super-infection exclusion protein B 22 151 1.1E-9 T 06-07-2017 IPR025982 Superinfection exclusion protein B AM402_RS21840 ddbab4983e8390ece51ab776b2781d81 235 SMART SM00052 6 225 3.9E-81 T 06-07-2017 IPR001633 EAL domain AM402_RS21840 ddbab4983e8390ece51ab776b2781d81 235 Pfam PF00563 EAL domain 12 217 1.1E-55 T 06-07-2017 IPR001633 EAL domain AM402_RS21840 ddbab4983e8390ece51ab776b2781d81 235 Gene3D G3DSA:3.20.20.450 11 217 3.1E-72 T 06-07-2017 IPR001633 EAL domain AM402_RS21840 ddbab4983e8390ece51ab776b2781d81 235 SUPERFAMILY SSF141868 13 217 6.41E-65 T 06-07-2017 IPR001633 EAL domain AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.3E-75 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 Gene3D G3DSA:3.90.930.12 2 82 2.7E-30 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 06-07-2017 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 SUPERFAMILY SSF56053 1 82 1.31E-24 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.1E-34 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.1E-34 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.1E-34 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.591 T 06-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 SUPERFAMILY SSF56053 83 177 6.27E-36 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 Gene3D G3DSA:3.90.930.12 83 177 3.8E-41 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 Pfam PF00347 Ribosomal protein L6 11 82 7.9E-20 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 Pfam PF00347 Ribosomal protein L6 90 164 1.7E-18 T 06-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00930 6df018f1a3920a149a51045d994ded1b 177 PIRSF PIRSF002162 1 177 5.3E-46 T 06-07-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 3.7E-126 T 06-07-2017 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 8.9E-124 T 06-07-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 7.3E-76 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 7.3E-76 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 7.3E-76 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 7.3E-76 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 7.3E-76 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 7.3E-76 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 7.3E-76 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS09235 338fde5ee6a25acd6648fc36c3a877f4 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 7.3E-76 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 SUPERFAMILY SSF69304 156 429 7.85E-59 T 06-07-2017 AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Pfam PF04052 TolB amino-terminal domain 24 123 3.1E-33 T 06-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Pfam PF07676 WD40-like Beta Propeller Repeat 281 316 1.1E-13 T 06-07-2017 IPR011659 WD40-like Beta Propeller AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Pfam PF07676 WD40-like Beta Propeller Repeat 204 224 0.0011 T 06-07-2017 IPR011659 WD40-like Beta Propeller AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Pfam PF07676 WD40-like Beta Propeller Repeat 238 273 1.6E-9 T 06-07-2017 IPR011659 WD40-like Beta Propeller AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Pfam PF07676 WD40-like Beta Propeller Repeat 336 355 0.043 T 06-07-2017 IPR011659 WD40-like Beta Propeller AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Pfam PF07676 WD40-like Beta Propeller Repeat 375 399 0.014 T 06-07-2017 IPR011659 WD40-like Beta Propeller AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Gene3D G3DSA:2.130.10.10 154 429 1.5E-79 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Gene3D G3DSA:3.40.50.10070 23 153 1.2E-52 T 06-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 SUPERFAMILY SSF52964 29 162 2.35E-41 T 06-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 428 5.7E-164 T 06-07-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AM402_RS16100 0963cb941787f97f6c0b90d6b79091e4 431 Hamap MF_00671 Protein TolB [tolB]. 5 427 35.371 T 06-07-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AM402_RS16240 1ca4026887f4984c72e7dc1ea00bed11 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 233 3.8E-53 T 06-07-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM402_RS16240 1ca4026887f4984c72e7dc1ea00bed11 247 Gene3D G3DSA:3.40.1390.30 1 107 7.2E-34 T 06-07-2017 AM402_RS16240 1ca4026887f4984c72e7dc1ea00bed11 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 4.8E-68 T 06-07-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM402_RS16240 1ca4026887f4984c72e7dc1ea00bed11 247 SUPERFAMILY SSF102705 1 246 4.19E-80 T 06-07-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM402_RS16240 1ca4026887f4984c72e7dc1ea00bed11 247 Gene3D G3DSA:3.40.1390.30 108 214 3.1E-28 T 06-07-2017 AM402_RS10920 9781a9f5398145cb6df583c511b5db77 523 SUPERFAMILY SSF53850 25 518 5.07E-87 T 06-07-2017 AM402_RS10920 9781a9f5398145cb6df583c511b5db77 523 PIRSF PIRSF002741 15 521 3.6E-56 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM402_RS10920 9781a9f5398145cb6df583c511b5db77 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 441 1.8E-57 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS10920 9781a9f5398145cb6df583c511b5db77 523 Gene3D G3DSA:3.40.190.10 143 297 1.6E-27 T 06-07-2017 AM402_RS10920 9781a9f5398145cb6df583c511b5db77 523 Gene3D G3DSA:3.10.105.10 298 491 9.0E-35 T 06-07-2017 AM402_RS06560 99b0c05277cac3daf60b09150b5b438d 832 SUPERFAMILY SSF141729 48 169 8.24E-24 T 06-07-2017 AM402_RS06560 99b0c05277cac3daf60b09150b5b438d 832 Pfam PF13954 PapC N-terminal domain 25 177 5.4E-33 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS06560 99b0c05277cac3daf60b09150b5b438d 832 Pfam PF13953 PapC C-terminal domain 760 815 4.0E-12 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS06560 99b0c05277cac3daf60b09150b5b438d 832 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 311 321 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site AM402_RS06560 99b0c05277cac3daf60b09150b5b438d 832 Pfam PF00577 Outer membrane usher protein 193 748 2.3E-157 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS05090 5520040acdef6e1abeb3f003b95169c6 527 Gene3D G3DSA:3.90.76.10 54 171 1.1E-26 T 06-07-2017 AM402_RS05090 5520040acdef6e1abeb3f003b95169c6 527 Gene3D G3DSA:3.10.105.10 289 468 2.8E-33 T 06-07-2017 AM402_RS05090 5520040acdef6e1abeb3f003b95169c6 527 Gene3D G3DSA:3.40.190.10 172 288 3.4E-28 T 06-07-2017 AM402_RS05090 5520040acdef6e1abeb3f003b95169c6 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 424 1.8E-73 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS05090 5520040acdef6e1abeb3f003b95169c6 527 SUPERFAMILY SSF53850 28 500 9.41E-92 T 06-07-2017 AM402_RS05090 5520040acdef6e1abeb3f003b95169c6 527 PIRSF PIRSF002741 29 512 3.4E-63 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM402_RS20445 a511421f0ea3b44484f79edfbc9cd7ea 222 Gene3D G3DSA:3.20.20.70 3 214 3.8E-91 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS20445 a511421f0ea3b44484f79edfbc9cd7ea 222 SMART SM01133 3 214 5.4E-98 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 AM402_RS20445 a511421f0ea3b44484f79edfbc9cd7ea 222 SUPERFAMILY SSF51569 3 213 8.48E-83 T 06-07-2017 AM402_RS20445 a511421f0ea3b44484f79edfbc9cd7ea 222 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 2 216 35.575 T 06-07-2017 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AM402_RS20445 a511421f0ea3b44484f79edfbc9cd7ea 222 PIRSF PIRSF001357 1 221 2.6E-78 T 06-07-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 AM402_RS20445 a511421f0ea3b44484f79edfbc9cd7ea 222 Pfam PF01791 DeoC/LacD family aldolase 7 205 7.0E-23 T 06-07-2017 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 AM402_RS20445 a511421f0ea3b44484f79edfbc9cd7ea 222 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 212 2.0E-89 T 06-07-2017 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 AM402_RS01295 1dd6c91c2327488fbdf541b631af0bc0 211 Pfam PF07305 Protein of unknown function (DUF1454) 13 203 1.5E-74 T 06-07-2017 IPR009918 Protein of unknown function DUF1454 AM402_RS19565 109019b5b46bdfb20c4895276fbf0db0 192 Pfam PF04972 BON domain 125 190 7.2E-14 T 06-07-2017 IPR007055 BON domain AM402_RS19565 109019b5b46bdfb20c4895276fbf0db0 192 Pfam PF04972 BON domain 46 114 2.5E-12 T 06-07-2017 IPR007055 BON domain AM402_RS19565 109019b5b46bdfb20c4895276fbf0db0 192 SMART SM00749 51 115 2.9E-8 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria AM402_RS19565 109019b5b46bdfb20c4895276fbf0db0 192 SMART SM00749 130 191 7.1E-5 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 6.8E-63 T 06-07-2017 IPR000150 Cof protein GO:0016787 AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 Gene3D G3DSA:3.30.1240.10 83 176 3.3E-19 T 06-07-2017 AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 7.8E-64 T 06-07-2017 IPR023214 HAD-like domain AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 06-07-2017 IPR000150 Cof protein GO:0016787 AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 Gene3D G3DSA:3.40.50.1000 177 264 2.0E-54 T 06-07-2017 IPR023214 HAD-like domain AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 Gene3D G3DSA:3.40.50.1000 1 72 2.0E-54 T 06-07-2017 IPR023214 HAD-like domain AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 231 2.6E-29 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 SUPERFAMILY SSF56784 1 263 4.72E-68 T 06-07-2017 IPR023214 HAD-like domain AM402_RS00505 3a7fa9d6ace7db7fd28099d38e3a59b0 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 06-07-2017 AM402_RS02450 f00df4a8236cf22203d7e0f1c37c78a6 402 Pfam PF12323 Helix-turn-helix domain 1 48 1.5E-15 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS02450 f00df4a8236cf22203d7e0f1c37c78a6 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 6.0E-24 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS02450 f00df4a8236cf22203d7e0f1c37c78a6 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 4.7E-11 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS02450 f00df4a8236cf22203d7e0f1c37c78a6 402 Pfam PF01385 Probable transposase 163 275 2.0E-29 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS05450 5b9c40fb95212aafb063d8b06abb370d 272 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 15 189 5.0E-25 T 06-07-2017 IPR010183 Bacteriophage lambda, Bet AM402_RS05450 5b9c40fb95212aafb063d8b06abb370d 272 Pfam PF03837 RecT family 39 193 7.4E-23 T 06-07-2017 IPR018330 RecT family GO:0003677|GO:0006259 AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 146 22.646 T 06-07-2017 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 SUPERFAMILY SSF69737 79 145 2.75E-20 T 06-07-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 Gene3D G3DSA:3.30.70.790 79 149 1.4E-28 T 06-07-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 Pfam PF02814 UreE urease accessory protein, N-terminal domain 18 72 2.1E-18 T 06-07-2017 IPR004029 UreE urease accessory, N-terminal AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 SMART SM00988 7 72 2.0E-19 T 06-07-2017 IPR004029 UreE urease accessory, N-terminal AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 PIRSF PIRSF036402 2 161 6.9E-50 T 06-07-2017 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 Pfam PF05194 UreE urease accessory protein, C-terminal domain 79 161 4.8E-27 T 06-07-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 SUPERFAMILY SSF69287 1 77 1.57E-18 T 06-07-2017 IPR004029 UreE urease accessory, N-terminal AM402_RS19580 18132d0dc2cb9eef883def4f9e8791b7 161 Gene3D G3DSA:2.60.260.20 17 78 3.2E-22 T 06-07-2017 AM402_RS01235 865d9e22217d0df3bd1d0456865edbb3 343 SUPERFAMILY SSF53822 69 339 1.38E-88 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS01235 865d9e22217d0df3bd1d0456865edbb3 343 Gene3D G3DSA:1.10.260.40 11 62 7.8E-20 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS01235 865d9e22217d0df3bd1d0456865edbb3 343 SMART SM00354 10 80 6.8E-26 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS01235 865d9e22217d0df3bd1d0456865edbb3 343 Gene3D G3DSA:3.40.50.2300 63 184 1.6E-41 T 06-07-2017 AM402_RS01235 865d9e22217d0df3bd1d0456865edbb3 343 SUPERFAMILY SSF47413 11 68 4.13E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS01235 865d9e22217d0df3bd1d0456865edbb3 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 8.0E-18 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS01235 865d9e22217d0df3bd1d0456865edbb3 343 Gene3D G3DSA:3.40.50.2300 185 318 3.8E-49 T 06-07-2017 AM402_RS01235 865d9e22217d0df3bd1d0456865edbb3 343 Pfam PF13377 Periplasmic binding protein-like domain 178 338 2.6E-40 T 06-07-2017 AM402_RS02965 7954ba4c0b00634b36960bb086cc6096 504 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 17 440 9.4E-145 T 06-07-2017 IPR002823 Protein of unknown function DUF112, transmembrane AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 8.7E-44 T 06-07-2017 IPR027486 Ribosomal protein S10 domain AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 06-07-2017 IPR027486 Ribosomal protein S10 domain AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 06-07-2017 IPR027486 Ribosomal protein S10 domain AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 06-07-2017 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 06-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS01010 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 06-07-2017 IPR027486 Ribosomal protein S10 domain AM402_RS11990 022327ffdeed629b1bc102bdb5f7689e 332 SUPERFAMILY SSF52418 70 328 1.2E-89 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS11990 022327ffdeed629b1bc102bdb5f7689e 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 38.22 T 06-07-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM402_RS11990 022327ffdeed629b1bc102bdb5f7689e 332 SUPERFAMILY SSF47648 2 67 7.85E-17 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS11990 022327ffdeed629b1bc102bdb5f7689e 332 Gene3D G3DSA:1.20.970.10 4 68 2.2E-25 T 06-07-2017 AM402_RS11990 022327ffdeed629b1bc102bdb5f7689e 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 2.8E-15 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS11990 022327ffdeed629b1bc102bdb5f7689e 332 Pfam PF00591 Glycosyl transferase family, a/b domain 74 321 8.9E-93 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS11990 022327ffdeed629b1bc102bdb5f7689e 332 Gene3D G3DSA:3.40.1030.10 72 329 2.2E-95 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS11990 022327ffdeed629b1bc102bdb5f7689e 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 329 1.6E-120 T 06-07-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM402_RS17370 e22b892b0c6686cd3ec8291b9bec526d 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 8.4E-130 T 06-07-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM402_RS17370 e22b892b0c6686cd3ec8291b9bec526d 308 Gene3D G3DSA:3.40.710.10 8 308 5.2E-124 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS17370 e22b892b0c6686cd3ec8291b9bec526d 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 45.859 T 06-07-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM402_RS17370 e22b892b0c6686cd3ec8291b9bec526d 308 SUPERFAMILY SSF56601 5 308 7.89E-113 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS17370 e22b892b0c6686cd3ec8291b9bec526d 308 Pfam PF04960 Glutaminase 24 308 8.4E-113 T 06-07-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 SUPERFAMILY SSF52021 3 139 4.71E-57 T 06-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.3E-11 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.3E-11 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.3E-11 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.5E-41 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.5E-41 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.5E-41 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.5E-41 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.5E-41 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.4E-50 T 06-07-2017 IPR017926 Glutamine amidotransferase AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 SMART SM01097 3 133 4.0E-90 T 06-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 Gene3D G3DSA:3.40.50.880 154 378 2.0E-85 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 Gene3D G3DSA:3.50.30.20 4 145 5.8E-63 T 06-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 SUPERFAMILY SSF52317 153 378 1.42E-63 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 06-07-2017 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.3E-53 T 06-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 1.2E-151 T 06-07-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS19310 2ca3cb9d410cd61b00e1950a5ccfede0 387 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.72 T 06-07-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 279 4.5E-100 T 06-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 SUPERFAMILY SSF55060 165 281 1.94E-33 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 Pfam PF00288 GHMP kinases N terminal domain 91 148 2.9E-10 T 06-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 Pfam PF08544 GHMP kinases C terminal 212 257 1.1E-4 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 PIRSF PIRSF010376 1 282 1.5E-82 T 06-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 Gene3D G3DSA:3.30.70.890 167 279 2.2E-39 T 06-07-2017 IPR013750 GHMP kinase, C-terminal domain AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 Gene3D G3DSA:3.30.230.10 4 163 1.8E-52 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 SUPERFAMILY SSF54211 2 162 4.48E-48 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS13195 9a63c8152a544a05875418fa3ea3893e 291 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 31.202 T 06-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM402_RS21765 a4569217abc763eab3b2131f86a22632 571 Gene3D G3DSA:1.10.443.10 369 443 1.7E-31 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS21765 a4569217abc763eab3b2131f86a22632 571 Gene3D G3DSA:1.10.443.10 476 560 1.7E-31 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS21765 a4569217abc763eab3b2131f86a22632 571 Pfam PF00589 Phage integrase family 377 548 7.6E-16 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS21765 a4569217abc763eab3b2131f86a22632 571 Gene3D G3DSA:1.10.150.130 236 336 2.1E-11 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS21765 a4569217abc763eab3b2131f86a22632 571 Pfam PF12482 Phage integrase protein 100 190 5.3E-27 T 06-07-2017 IPR022169 Protein of unknown function DUF3701 AM402_RS21765 a4569217abc763eab3b2131f86a22632 571 SUPERFAMILY SSF56349 224 558 3.24E-33 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS21215 3be87bf3d9064fb3688f9538897d8a49 214 SUPERFAMILY SSF54427 80 213 3.07E-10 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS21215 3be87bf3d9064fb3688f9538897d8a49 214 Pfam PF04335 VirB8 protein 11 212 4.2E-23 T 06-07-2017 IPR007430 Bacterial virulence protein VirB8 GO:0016020 AM402_RS07140 7282e8d167282d0ef9878facf17795ec 276 Gene3D G3DSA:2.60.120.500 132 276 8.7E-77 T 06-07-2017 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM402_RS07140 7282e8d167282d0ef9878facf17795ec 276 PIRSF PIRSF006625 1 276 1.3E-132 T 06-07-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM402_RS07140 7282e8d167282d0ef9878facf17795ec 276 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 276 55.837 T 06-07-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM402_RS07140 7282e8d167282d0ef9878facf17795ec 276 SUPERFAMILY SSF51182 1 260 3.56E-107 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS07140 7282e8d167282d0ef9878facf17795ec 276 Gene3D G3DSA:2.60.120.520 20 131 2.7E-51 T 06-07-2017 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM402_RS07140 7282e8d167282d0ef9878facf17795ec 276 Pfam PF04962 KduI/IolB family 32 271 2.5E-38 T 06-07-2017 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AM402_RS16960 408ac21630e4741c6d0df1f4b46dd12a 505 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 497 1.0E-195 T 06-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM402_RS16960 408ac21630e4741c6d0df1f4b46dd12a 505 Gene3D G3DSA:1.20.1250.20 475 500 1.2E-22 T 06-07-2017 AM402_RS16960 408ac21630e4741c6d0df1f4b46dd12a 505 Gene3D G3DSA:1.20.1250.20 265 423 1.2E-22 T 06-07-2017 AM402_RS16960 408ac21630e4741c6d0df1f4b46dd12a 505 Gene3D G3DSA:1.20.1250.20 14 184 2.9E-31 T 06-07-2017 AM402_RS16960 408ac21630e4741c6d0df1f4b46dd12a 505 Pfam PF07690 Major Facilitator Superfamily 18 413 4.7E-53 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS16960 408ac21630e4741c6d0df1f4b46dd12a 505 SUPERFAMILY SSF103473 250 422 1.06E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS16960 408ac21630e4741c6d0df1f4b46dd12a 505 SUPERFAMILY SSF103473 474 499 1.06E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS16960 408ac21630e4741c6d0df1f4b46dd12a 505 SUPERFAMILY SSF103473 10 195 1.06E-71 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS00815 f2bf3dc4ab85f077518aaf42f8497883 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 70 4.2E-18 T 06-07-2017 IPR009962 Protein of unknown function DUF1488 AM402_RS00815 f2bf3dc4ab85f077518aaf42f8497883 87 SUPERFAMILY SSF160272 1 68 6.54E-23 T 06-07-2017 IPR009962 Protein of unknown function DUF1488 AM402_RS00815 f2bf3dc4ab85f077518aaf42f8497883 87 Gene3D G3DSA:3.30.160.140 1 68 4.1E-25 T 06-07-2017 IPR009962 Protein of unknown function DUF1488 AM402_RS06050 048a473712eebb7f1cccdf0d06b6541d 337 SUPERFAMILY SSF53850 31 332 1.13E-63 T 06-07-2017 AM402_RS06050 048a473712eebb7f1cccdf0d06b6541d 337 Gene3D G3DSA:3.40.190.10 269 327 4.3E-19 T 06-07-2017 AM402_RS06050 048a473712eebb7f1cccdf0d06b6541d 337 Gene3D G3DSA:3.40.190.10 10 130 4.3E-19 T 06-07-2017 AM402_RS06050 048a473712eebb7f1cccdf0d06b6541d 337 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 29 331 1.4E-131 T 06-07-2017 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 AM402_RS06050 048a473712eebb7f1cccdf0d06b6541d 337 Gene3D G3DSA:3.40.190.10 132 268 2.7E-24 T 06-07-2017 AM402_RS06050 048a473712eebb7f1cccdf0d06b6541d 337 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 22 337 2.3E-145 T 06-07-2017 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 AM402_RS06050 048a473712eebb7f1cccdf0d06b6541d 337 Pfam PF13343 Bacterial extracellular solute-binding protein 84 312 5.9E-19 T 06-07-2017 AM402_RS17030 00c5f5763240f69dfd2930033af6b202 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 312 4.6E-107 T 06-07-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS17030 00c5f5763240f69dfd2930033af6b202 325 SUPERFAMILY SSF55120 77 322 2.06E-79 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS17030 00c5f5763240f69dfd2930033af6b202 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.8E-32 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS17030 00c5f5763240f69dfd2930033af6b202 325 SMART SM00363 18 83 2.8E-11 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS17030 00c5f5763240f69dfd2930033af6b202 325 Gene3D G3DSA:3.10.290.10 18 68 2.1E-12 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS17030 00c5f5763240f69dfd2930033af6b202 325 Pfam PF01479 S4 domain 18 63 3.4E-9 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS17030 00c5f5763240f69dfd2930033af6b202 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS17030 00c5f5763240f69dfd2930033af6b202 325 SUPERFAMILY SSF55174 17 69 8.92E-11 T 06-07-2017 AM402_RS00890 cd2ade55df70dfcee4574b32401de264 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 06-07-2017 IPR018102 Ribosomal S11, conserved site AM402_RS00890 cd2ade55df70dfcee4574b32401de264 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.8E-55 T 06-07-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00890 cd2ade55df70dfcee4574b32401de264 129 SUPERFAMILY SSF53137 14 129 3.79E-48 T 06-07-2017 AM402_RS00890 cd2ade55df70dfcee4574b32401de264 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-54 T 06-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM402_RS00890 cd2ade55df70dfcee4574b32401de264 129 PIRSF PIRSF002131 1 129 4.8E-53 T 06-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM402_RS00890 cd2ade55df70dfcee4574b32401de264 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.772 T 06-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM402_RS00890 cd2ade55df70dfcee4574b32401de264 129 Gene3D G3DSA:3.30.420.80 9 129 9.1E-55 T 06-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM402_RS19060 82c61f533ac100bc1dd6f1ed9404f2ff 357 Pfam PF02547 Queuosine biosynthesis protein 3 343 9.6E-133 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM402_RS19060 82c61f533ac100bc1dd6f1ed9404f2ff 357 Gene3D G3DSA:2.40.10.240 64 142 2.2E-19 T 06-07-2017 AM402_RS19060 82c61f533ac100bc1dd6f1ed9404f2ff 357 Gene3D G3DSA:3.40.1780.10 1 62 1.6E-101 T 06-07-2017 AM402_RS19060 82c61f533ac100bc1dd6f1ed9404f2ff 357 Gene3D G3DSA:3.40.1780.10 179 344 1.6E-101 T 06-07-2017 AM402_RS19060 82c61f533ac100bc1dd6f1ed9404f2ff 357 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 46.879 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM402_RS19060 82c61f533ac100bc1dd6f1ed9404f2ff 357 SUPERFAMILY SSF111337 1 343 9.81E-138 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM402_RS19060 82c61f533ac100bc1dd6f1ed9404f2ff 357 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 7.6E-162 T 06-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM402_RS14540 9b57d1882f9851de18daba3c27017a44 240 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 6 237 39.951 T 06-07-2017 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 AM402_RS14540 9b57d1882f9851de18daba3c27017a44 240 SMART SM00014 96 214 3.8E-6 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS14540 9b57d1882f9851de18daba3c27017a44 240 Gene3D G3DSA:1.20.144.10 28 210 7.4E-12 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS14540 9b57d1882f9851de18daba3c27017a44 240 SUPERFAMILY SSF48317 45 217 9.81E-15 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS14540 9b57d1882f9851de18daba3c27017a44 240 Pfam PF01569 PAP2 superfamily 101 205 9.7E-9 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 Pfam PF00771 FHIPEP family 31 681 4.0E-269 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.1E-57 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 PIRSF PIRSF005419 13 696 2.6E-246 T 06-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 06-07-2017 IPR025505 FHIPEP conserved site AM402_RS09665 3a91eae24fe0a248939be0fd8b59c61e 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 691 5.4E-277 T 06-07-2017 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AM402_RS11455 a323be9bbfb02f11a38a93883cb9b6b5 225 Pfam PF00717 Peptidase S24-like 138 210 1.9E-13 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS11455 a323be9bbfb02f11a38a93883cb9b6b5 225 Gene3D G3DSA:1.10.260.40 9 76 3.6E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11455 a323be9bbfb02f11a38a93883cb9b6b5 225 SUPERFAMILY SSF47413 9 78 2.82E-7 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11455 a323be9bbfb02f11a38a93883cb9b6b5 225 Gene3D G3DSA:2.10.109.10 132 224 6.8E-31 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS11455 a323be9bbfb02f11a38a93883cb9b6b5 225 SMART SM00530 14 73 1.4E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS11455 a323be9bbfb02f11a38a93883cb9b6b5 225 Pfam PF01381 Helix-turn-helix 35 73 7.8E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS11455 a323be9bbfb02f11a38a93883cb9b6b5 225 SUPERFAMILY SSF51306 96 221 1.19E-26 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS12925 065634e03733ba116eb23a77290f6cc9 95 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 3.0E-32 T 06-07-2017 IPR027354 YcgL domain AM402_RS12925 065634e03733ba116eb23a77290f6cc9 95 Pfam PF05166 YcgL domain 3 75 1.6E-34 T 06-07-2017 IPR027354 YcgL domain AM402_RS12925 065634e03733ba116eb23a77290f6cc9 95 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.792 T 06-07-2017 IPR027354 YcgL domain AM402_RS12925 065634e03733ba116eb23a77290f6cc9 95 SUPERFAMILY SSF160191 1 92 3.01E-39 T 06-07-2017 AM402_RS08635 552286e6d068fb255b895edb3635c9c1 320 SUPERFAMILY SSF47413 12 81 1.44E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS08635 552286e6d068fb255b895edb3635c9c1 320 Gene3D G3DSA:1.10.260.40 5 84 1.6E-11 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS08635 552286e6d068fb255b895edb3635c9c1 320 Pfam PF13464 Domain of unknown function (DUF4115) 245 316 8.5E-21 T 06-07-2017 IPR025194 Domain of unknown function DUF4115 AM402_RS08635 552286e6d068fb255b895edb3635c9c1 320 Pfam PF13413 Helix-turn-helix domain 18 76 1.7E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS03035 383514a13f226bbd9814b9f6d9fe47be 776 Pfam PF02421 Ferrous iron transport protein B 5 163 9.0E-66 T 06-07-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 AM402_RS03035 383514a13f226bbd9814b9f6d9fe47be 776 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 163 2.0E-13 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS03035 383514a13f226bbd9814b9f6d9fe47be 776 SUPERFAMILY SSF52540 4 173 1.72E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03035 383514a13f226bbd9814b9f6d9fe47be 776 Pfam PF07664 Ferrous iron transport protein B C terminus 460 512 1.3E-22 T 06-07-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AM402_RS03035 383514a13f226bbd9814b9f6d9fe47be 776 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 692 2.3E-225 T 06-07-2017 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AM402_RS03035 383514a13f226bbd9814b9f6d9fe47be 776 Gene3D G3DSA:3.40.50.300 3 167 3.9E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03035 383514a13f226bbd9814b9f6d9fe47be 776 Pfam PF07670 Nucleoside recognition 358 448 6.1E-13 T 06-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM402_RS03035 383514a13f226bbd9814b9f6d9fe47be 776 Pfam PF07670 Nucleoside recognition 517 694 6.1E-37 T 06-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM402_RS18530 384a6555722c91fc880e52460ffb66cf 346 Pfam PF00005 ABC transporter 23 164 6.8E-36 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS18530 384a6555722c91fc880e52460ffb66cf 346 SUPERFAMILY SSF52540 7 244 2.66E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18530 384a6555722c91fc880e52460ffb66cf 346 SMART SM00382 31 214 9.5E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18530 384a6555722c91fc880e52460ffb66cf 346 Pfam PF08402 TOBE domain 274 344 1.8E-8 T 06-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM402_RS18530 384a6555722c91fc880e52460ffb66cf 346 Gene3D G3DSA:3.40.50.300 4 238 8.0E-80 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18530 384a6555722c91fc880e52460ffb66cf 346 SUPERFAMILY SSF50331 240 345 1.75E-14 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AM402_RS18530 384a6555722c91fc880e52460ffb66cf 346 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS20335 6906d705b5c0e9a49d39c9a7d4d64aac 176 Pfam PF09335 SNARE associated Golgi protein 41 164 1.7E-15 T 06-07-2017 IPR032816 SNARE associated Golgi protein AM402_RS09610 76cc0be64c68ff63ff9256579490172c 349 Gene3D G3DSA:3.30.1330.60 150 261 3.9E-16 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS09610 76cc0be64c68ff63ff9256579490172c 349 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 65 5.4E-19 T 06-07-2017 IPR025713 Motility protein B, N-terminal domain AM402_RS09610 76cc0be64c68ff63ff9256579490172c 349 SUPERFAMILY SSF103088 153 261 1.7E-18 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS09610 76cc0be64c68ff63ff9256579490172c 349 Pfam PF00691 OmpA family 157 246 4.7E-11 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS17770 6702737662c53cfe7f3052d5cccf11fd 503 Pfam PF07916 TraG-like protein, N-terminal region 8 477 5.5E-66 T 06-07-2017 IPR012931 TraG-like, N-terminal AM402_RS07625 fe550cbafd2a1247abe25d77121fdcf3 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 35.204 T 06-07-2017 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AM402_RS07625 fe550cbafd2a1247abe25d77121fdcf3 218 SUPERFAMILY SSF75445 127 198 5.36E-24 T 06-07-2017 AM402_RS07625 fe550cbafd2a1247abe25d77121fdcf3 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 7.2E-71 T 06-07-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AM402_RS07625 fe550cbafd2a1247abe25d77121fdcf3 218 SUPERFAMILY SSF100950 1 146 2.47E-48 T 06-07-2017 AM402_RS07625 fe550cbafd2a1247abe25d77121fdcf3 218 Gene3D G3DSA:3.40.50.1360 1 136 7.4E-61 T 06-07-2017 AM402_RS07625 fe550cbafd2a1247abe25d77121fdcf3 218 Gene3D G3DSA:3.30.70.260 137 196 5.5E-29 T 06-07-2017 AM402_RS07625 fe550cbafd2a1247abe25d77121fdcf3 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 3.1E-60 T 06-07-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01021 OMPA domain signature 239 261 2.2E-20 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01021 OMPA domain signature 286 302 2.2E-20 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01021 OMPA domain signature 271 286 2.2E-20 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 ProSitePatterns PS01068 OmpA-like domain. 273 317 - T 06-07-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 Pfam PF01389 OmpA-like transmembrane domain 23 208 1.2E-67 T 06-07-2017 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01022 Outer membrane protein A signature 295 314 1.9E-49 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01022 Outer membrane protein A signature 179 193 1.9E-49 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01022 Outer membrane protein A signature 112 128 1.9E-49 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01022 Outer membrane protein A signature 256 275 1.9E-49 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01022 Outer membrane protein A signature 329 342 1.9E-49 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 PRINTS PR01022 Outer membrane protein A signature 193 207 1.9E-49 T 06-07-2017 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 Gene3D G3DSA:3.30.1330.60 226 350 2.2E-37 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 Pfam PF00691 OmpA family 238 331 4.2E-21 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 SUPERFAMILY SSF103088 225 350 8.37E-34 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 Gene3D G3DSA:2.40.160.20 10 225 1.1E-76 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS15030 6df1a126fc12ed9f48a57c2981ab41e4 362 SUPERFAMILY SSF56925 22 208 1.28E-40 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS00595 00ebaffc95dc9b5d7bc0a56d5764ec68 409 SUPERFAMILY SSF48452 94 219 2.09E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS00595 00ebaffc95dc9b5d7bc0a56d5764ec68 409 SUPERFAMILY SSF48452 269 388 2.09E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS00595 00ebaffc95dc9b5d7bc0a56d5764ec68 409 Gene3D G3DSA:1.25.40.10 83 203 1.0E-11 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS00595 00ebaffc95dc9b5d7bc0a56d5764ec68 409 Gene3D G3DSA:1.25.40.10 265 388 1.0E-11 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS00595 00ebaffc95dc9b5d7bc0a56d5764ec68 409 Pfam PF07219 HemY protein N-terminus 26 132 8.4E-33 T 06-07-2017 IPR010817 HemY, N-terminal AM402_RS00595 00ebaffc95dc9b5d7bc0a56d5764ec68 409 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 1.8E-113 T 06-07-2017 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 SUPERFAMILY SSF159501 972 1125 4.87E-7 T 06-07-2017 AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 SUPERFAMILY SSF158842 663 933 4.71E-45 T 06-07-2017 AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 SUPERFAMILY SSF51120 2588 2709 4.06E-18 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 SUPERFAMILY SSF51120 2004 2064 6.28E-12 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 SUPERFAMILY SSF51120 2113 2203 6.28E-12 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 Gene3D G3DSA:2.150.10.10 2584 2732 5.6E-26 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 Gene3D G3DSA:2.150.10.10 1990 2070 3.5E-16 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 Gene3D G3DSA:2.150.10.10 2119 2235 3.5E-16 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 1148 1159 - T 06-07-2017 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 PRINTS PR00313 NodO calcium binding signature 2605 2613 3.7E-5 T 06-07-2017 AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 PRINTS PR00313 NodO calcium binding signature 2168 2179 3.7E-5 T 06-07-2017 AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 PRINTS PR00313 NodO calcium binding signature 2623 2631 3.7E-5 T 06-07-2017 AM402_RS19390 70f4822c18f213814539e639d7922b59 2776 PRINTS PR00313 NodO calcium binding signature 2632 2641 3.7E-5 T 06-07-2017 AM402_RS04765 6332d056d6c3c3fbf5722a2d64dba9b2 137 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 34 136 1.7E-36 T 06-07-2017 IPR021356 Integrating conjugative element protein PFL4702 AM402_RS04765 6332d056d6c3c3fbf5722a2d64dba9b2 137 Pfam PF11190 Protein of unknown function (DUF2976) 49 135 2.8E-34 T 06-07-2017 IPR021356 Integrating conjugative element protein PFL4702 AM402_RS15365 dd06c548badbecc67521b46e8d0aad14 243 Pfam PF04288 MukE-like family 10 231 6.0E-123 T 06-07-2017 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AM402_RS15365 dd06c548badbecc67521b46e8d0aad14 243 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 241 47.24 T 06-07-2017 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AM402_RS12485 0721dec05a1dfd49b453f23dc8e64754 266 SUPERFAMILY SSF53850 28 266 8.69E-57 T 06-07-2017 AM402_RS12485 0721dec05a1dfd49b453f23dc8e64754 266 Gene3D G3DSA:3.40.190.10 26 157 1.1E-42 T 06-07-2017 AM402_RS12485 0721dec05a1dfd49b453f23dc8e64754 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 10 266 2.4E-72 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS12485 0721dec05a1dfd49b453f23dc8e64754 266 Pfam PF03180 NLPA lipoprotein 28 266 1.2E-71 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS12485 0721dec05a1dfd49b453f23dc8e64754 266 PIRSF PIRSF002854 1 266 9.1E-76 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 Pfam PF00270 DEAD/DEAH box helicase 32 196 3.7E-50 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 SMART SM00487 26 224 9.2E-66 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 Gene3D G3DSA:3.40.50.300 209 376 5.0E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 SUPERFAMILY SSF52540 76 362 1.09E-73 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 Pfam PF03880 DbpA RNA binding domain 479 548 2.3E-19 T 06-07-2017 IPR005580 DbpA, RNA-binding domain AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 550 46.456 T 06-07-2017 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 SMART SM00490 260 341 1.2E-32 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 Gene3D G3DSA:3.40.50.300 5 208 6.8E-82 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 Pfam PF00271 Helicase conserved C-terminal domain 233 341 2.6E-29 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS00100 98107da4bce719433a5db264d3f5fce8 611 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM402_RS07645 d6b8c746fa760f2d27db2cec599c2b8c 690 Pfam PF00005 ABC transporter 470 618 2.2E-32 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS07645 d6b8c746fa760f2d27db2cec599c2b8c 690 Pfam PF00664 ABC transporter transmembrane region 143 408 3.1E-46 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS07645 d6b8c746fa760f2d27db2cec599c2b8c 690 SUPERFAMILY SSF52540 444 688 1.33E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07645 d6b8c746fa760f2d27db2cec599c2b8c 690 SUPERFAMILY SSF90123 127 438 1.24E-62 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS07645 d6b8c746fa760f2d27db2cec599c2b8c 690 Gene3D G3DSA:3.40.50.300 452 683 1.8E-79 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07645 d6b8c746fa760f2d27db2cec599c2b8c 690 SMART SM00382 478 672 7.4E-18 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS07645 d6b8c746fa760f2d27db2cec599c2b8c 690 ProSitePatterns PS00211 ABC transporters family signature. 590 604 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS07645 d6b8c746fa760f2d27db2cec599c2b8c 690 Gene3D G3DSA:1.20.1560.10 127 438 2.6E-70 T 06-07-2017 AM402_RS03240 c0042d2ce7170aa41b0e5b7630396575 205 SUPERFAMILY SSF56784 3 194 2.41E-43 T 06-07-2017 IPR023214 HAD-like domain AM402_RS03240 c0042d2ce7170aa41b0e5b7630396575 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 184 6.4E-17 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS03240 c0042d2ce7170aa41b0e5b7630396575 205 Gene3D G3DSA:1.10.150.240 17 81 2.6E-30 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AM402_RS03240 c0042d2ce7170aa41b0e5b7630396575 205 Gene3D G3DSA:3.40.50.1000 83 192 8.8E-33 T 06-07-2017 IPR023214 HAD-like domain AM402_RS03240 c0042d2ce7170aa41b0e5b7630396575 205 Gene3D G3DSA:3.40.50.1000 3 16 8.8E-33 T 06-07-2017 IPR023214 HAD-like domain AM402_RS03240 c0042d2ce7170aa41b0e5b7630396575 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 81 182 7.3E-11 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15500 50c51af6072fccb05c0a3957e5dc30c5 201 Gene3D G3DSA:2.50.20.10 23 201 6.2E-56 T 06-07-2017 AM402_RS15500 50c51af6072fccb05c0a3957e5dc30c5 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 190 1.3E-53 T 06-07-2017 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AM402_RS15500 50c51af6072fccb05c0a3957e5dc30c5 201 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 4 200 31.191 T 06-07-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM402_RS15500 50c51af6072fccb05c0a3957e5dc30c5 201 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 201 7.7E-85 T 06-07-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM402_RS15500 50c51af6072fccb05c0a3957e5dc30c5 201 SUPERFAMILY SSF89392 22 201 1.37E-53 T 06-07-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM402_RS07595 083cbd1f86a44879bb41b8da6e5a4cb1 286 Gene3D G3DSA:2.30.30.60 127 175 3.1E-18 T 06-07-2017 AM402_RS07595 083cbd1f86a44879bb41b8da6e5a4cb1 286 Gene3D G3DSA:3.30.70.100 180 264 7.7E-28 T 06-07-2017 AM402_RS07595 083cbd1f86a44879bb41b8da6e5a4cb1 286 SUPERFAMILY SSF50182 112 177 4.25E-17 T 06-07-2017 IPR010920 LSM domain AM402_RS07595 083cbd1f86a44879bb41b8da6e5a4cb1 286 SUPERFAMILY SSF82689 179 277 4.18E-31 T 06-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM402_RS07595 083cbd1f86a44879bb41b8da6e5a4cb1 286 Pfam PF05552 Conserved TM helix 14 62 3.3E-14 T 06-07-2017 IPR008910 Conserved TM helix AM402_RS07595 083cbd1f86a44879bb41b8da6e5a4cb1 286 Pfam PF00924 Mechanosensitive ion channel 70 266 3.4E-57 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM402_RS07595 083cbd1f86a44879bb41b8da6e5a4cb1 286 SUPERFAMILY SSF82861 26 110 1.44E-16 T 06-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM402_RS07595 083cbd1f86a44879bb41b8da6e5a4cb1 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 141 175 - T 06-07-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 SMART SM00895 82 204 4.4E-11 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 SMART SM00345 14 72 2.9E-18 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 SUPERFAMILY SSF46785 2 76 4.07E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 SUPERFAMILY SSF48008 79 212 2.88E-24 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 Pfam PF07729 FCD domain 82 202 6.0E-12 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 Gene3D G3DSA:1.10.10.10 12 73 7.6E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 Gene3D G3DSA:1.20.120.530 75 216 5.8E-34 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 6.9E-17 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.6E-5 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS20225 97e6023fc96fb0b267f12d6afd454271 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.6E-5 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS17380 f07953ed2cb438ba45d3f6a2cc38964d 239 SUPERFAMILY SSF53335 18 237 1.97E-40 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS17380 f07953ed2cb438ba45d3f6a2cc38964d 239 Pfam PF02390 Putative methyltransferase 64 233 1.7E-61 T 06-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM402_RS17380 f07953ed2cb438ba45d3f6a2cc38964d 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.64 T 06-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM402_RS17380 f07953ed2cb438ba45d3f6a2cc38964d 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 1.2E-71 T 06-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM402_RS17380 f07953ed2cb438ba45d3f6a2cc38964d 239 Gene3D G3DSA:3.40.50.150 62 203 1.0E-15 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 Pfam PF01546 Peptidase family M20/M25/M40 63 372 3.5E-41 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 Gene3D G3DSA:3.30.70.360 189 289 9.7E-34 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 SUPERFAMILY SSF53187 5 179 6.56E-66 T 06-07-2017 AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 SUPERFAMILY SSF53187 293 373 6.56E-66 T 06-07-2017 AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 Pfam PF07687 Peptidase dimerisation domain 176 282 1.6E-23 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 374 6.3E-171 T 06-07-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 SUPERFAMILY SSF55031 180 289 4.34E-30 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 62 71 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 52.293 T 06-07-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 Gene3D G3DSA:3.40.630.10 317 374 1.5E-77 T 06-07-2017 AM402_RS10230 79666ed313013d0e4376e1e2d866ae3f 376 Gene3D G3DSA:3.40.630.10 5 188 1.5E-77 T 06-07-2017 AM402_RS04475 1bf705e310463b7cd382a267639a0f1a 47 SUPERFAMILY SSF56349 6 39 2.12E-6 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS04475 1bf705e310463b7cd382a267639a0f1a 47 Gene3D G3DSA:1.10.443.10 7 39 5.3E-5 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS10195 2ec99f4101aa324ce6da91bf581cadda 237 Gene3D G3DSA:3.30.470.20 94 219 4.1E-50 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS10195 2ec99f4101aa324ce6da91bf581cadda 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.929 T 06-07-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS10195 2ec99f4101aa324ce6da91bf581cadda 237 Pfam PF01259 SAICAR synthetase 6 231 1.2E-58 T 06-07-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS10195 2ec99f4101aa324ce6da91bf581cadda 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 06-07-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS10195 2ec99f4101aa324ce6da91bf581cadda 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 1.5E-79 T 06-07-2017 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AM402_RS10195 2ec99f4101aa324ce6da91bf581cadda 237 SUPERFAMILY SSF56104 4 232 1.77E-76 T 06-07-2017 AM402_RS10195 2ec99f4101aa324ce6da91bf581cadda 237 Gene3D G3DSA:3.30.200.20 7 93 1.6E-31 T 06-07-2017 AM402_RS10195 2ec99f4101aa324ce6da91bf581cadda 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 06-07-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS02975 c18a462317c1acff9a564b9cbdcf1ac3 196 Pfam PF14124 Domain of unknown function (DUF4291) 12 192 1.0E-72 T 06-07-2017 IPR025633 Protein of unknown function DUF4291 AM402_RS11035 db05506d01250aa7e058816f8c4b9a7b 425 Gene3D G3DSA:2.30.40.10 22 64 1.7E-5 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS11035 db05506d01250aa7e058816f8c4b9a7b 425 Pfam PF07969 Amidohydrolase family 46 404 9.9E-53 T 06-07-2017 IPR013108 Amidohydrolase 3 AM402_RS11035 db05506d01250aa7e058816f8c4b9a7b 425 Gene3D G3DSA:3.20.20.140 65 366 4.0E-124 T 06-07-2017 AM402_RS11035 db05506d01250aa7e058816f8c4b9a7b 425 SUPERFAMILY SSF51556 56 375 1.15E-107 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS12990 296a1a625eb70661572224960751f51f 491 SUPERFAMILY SSF51735 5 189 5.71E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12990 296a1a625eb70661572224960751f51f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 1.9E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 1.9E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 1.9E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 1.9E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 1.9E-47 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 1.5E-196 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.775 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 1.6E-116 T 06-07-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 06-07-2017 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 SUPERFAMILY SSF55347 176 488 2.32E-113 T 06-07-2017 AM402_RS12990 296a1a625eb70661572224960751f51f 491 PIRSF PIRSF000110 1 491 1.4E-178 T 06-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 4.6E-57 T 06-07-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM402_RS12990 296a1a625eb70661572224960751f51f 491 Gene3D G3DSA:3.30.360.10 186 487 1.6E-121 T 06-07-2017 AM402_RS12990 296a1a625eb70661572224960751f51f 491 Gene3D G3DSA:3.40.50.720 7 185 6.9E-60 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS20255 c36ec39c3395d5ba9eab76feb6849aa7 483 Pfam PF02386 Cation transport protein 37 477 7.0E-90 T 06-07-2017 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM402_RS20255 c36ec39c3395d5ba9eab76feb6849aa7 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 1.9E-124 T 06-07-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AM402_RS20255 c36ec39c3395d5ba9eab76feb6849aa7 483 PIRSF PIRSF006247 1 483 1.5E-185 T 06-07-2017 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AM402_RS19505 e8e8612ca9903fb40a44f78d81d6190d 222 Pfam PF09335 SNARE associated Golgi protein 48 174 5.7E-20 T 06-07-2017 IPR032816 SNARE associated Golgi protein AM402_RS18845 c676c80d2a2ef2f57abd0755a74b8842 124 SMART SM00278 101 120 520.0 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS18845 c676c80d2a2ef2f57abd0755a74b8842 124 SMART SM00278 71 90 0.0067 T 06-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM402_RS18845 c676c80d2a2ef2f57abd0755a74b8842 124 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 61 123 2.8E-22 T 06-07-2017 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AM402_RS18845 c676c80d2a2ef2f57abd0755a74b8842 124 Gene3D G3DSA:1.10.150.280 40 123 4.6E-23 T 06-07-2017 AM402_RS18845 c676c80d2a2ef2f57abd0755a74b8842 124 SUPERFAMILY SSF47781 56 123 9.89E-26 T 06-07-2017 IPR010994 RuvA domain 2-like AM402_RS18845 c676c80d2a2ef2f57abd0755a74b8842 124 Pfam PF12836 Helix-hairpin-helix motif 59 121 1.9E-21 T 06-07-2017 AM402_RS19765 369a8a5fe1d428d9680cfa0c052a0913 95 Gene3D G3DSA:3.30.160.100 1 95 1.3E-36 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM402_RS19765 369a8a5fe1d428d9680cfa0c052a0913 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 5.0E-32 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM402_RS19765 369a8a5fe1d428d9680cfa0c052a0913 95 SUPERFAMILY SSF69754 1 95 5.36E-33 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM402_RS19765 369a8a5fe1d428d9680cfa0c052a0913 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 6.3E-27 T 06-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM402_RS10035 1abc219d25385814d326c480490406e0 297 SMART SM00046 4 131 3.1E-14 T 06-07-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM402_RS10035 1abc219d25385814d326c480490406e0 297 SUPERFAMILY SSF111331 6 293 8.39E-67 T 06-07-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM402_RS10035 1abc219d25385814d326c480490406e0 297 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 296 2.7E-121 T 06-07-2017 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM402_RS10035 1abc219d25385814d326c480490406e0 297 Gene3D G3DSA:3.40.50.10330 32 93 6.8E-4 T 06-07-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AM402_RS10035 1abc219d25385814d326c480490406e0 297 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 127 2.0E-27 T 06-07-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM402_RS10035 1abc219d25385814d326c480490406e0 297 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 291 3.5E-84 T 06-07-2017 IPR005218 Diacylglycerol/lipid kinase AM402_RS18260 ca273d522fa17184f4b62cacf39975be 359 SUPERFAMILY SSF51569 4 357 2.34E-133 T 06-07-2017 AM402_RS18260 ca273d522fa17184f4b62cacf39975be 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 1.2E-186 T 06-07-2017 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AM402_RS18260 ca273d522fa17184f4b62cacf39975be 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 3.4E-114 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS18260 ca273d522fa17184f4b62cacf39975be 359 Gene3D G3DSA:3.20.20.70 11 355 7.1E-126 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS18260 ca273d522fa17184f4b62cacf39975be 359 PIRSF PIRSF001359 13 359 1.1E-100 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS18260 ca273d522fa17184f4b62cacf39975be 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS18260 ca273d522fa17184f4b62cacf39975be 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 2.1E-91 T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS18260 ca273d522fa17184f4b62cacf39975be 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 112 - T 06-07-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM402_RS01145 41e00bc648dd32f290f32c61c853084c 257 PIRSF PIRSF000728 1 257 2.4E-72 T 06-07-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS01145 41e00bc648dd32f290f32c61c853084c 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 25.63 T 06-07-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS01145 41e00bc648dd32f290f32c61c853084c 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 9.6E-71 T 06-07-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS01145 41e00bc648dd32f290f32c61c853084c 257 Gene3D G3DSA:3.40.1160.10 2 256 1.6E-75 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS01145 41e00bc648dd32f290f32c61c853084c 257 SUPERFAMILY SSF53633 2 256 2.36E-57 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS01145 41e00bc648dd32f290f32c61c853084c 257 Pfam PF00696 Amino acid kinase family 4 234 2.1E-39 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 Gene3D G3DSA:3.40.228.10 207 411 1.2E-76 T 06-07-2017 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 SUPERFAMILY SSF50692 641 814 1.15E-39 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 Gene3D G3DSA:2.20.25.90 53 120 2.5E-17 T 06-07-2017 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 116 1.0E-16 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 06-07-2017 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 SUPERFAMILY SSF53706 57 696 4.32E-179 T 06-07-2017 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 1.7E-108 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 Gene3D G3DSA:3.40.50.740 412 654 8.2E-79 T 06-07-2017 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 Gene3D G3DSA:3.40.50.740 121 206 8.2E-79 T 06-07-2017 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 Gene3D G3DSA:2.40.40.20 670 814 2.7E-56 T 06-07-2017 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 2.5E-28 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM402_RS12590 c5a6b812a8721683aa42b5863a2c809d 814 SMART SM00926 56 116 4.6E-11 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09075 4470f2d5610117702053f1fa285a531d 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 35.51 T 06-07-2017 IPR007334 Uncharacterised protein family UPF0208 AM402_RS09075 4470f2d5610117702053f1fa285a531d 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 3.9E-58 T 06-07-2017 IPR007334 Uncharacterised protein family UPF0208 AM402_RS15435 6939f99126d9c0694885438a9ddfb33a 362 SUPERFAMILY SSF53383 1 360 4.27E-118 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS15435 6939f99126d9c0694885438a9ddfb33a 362 Pfam PF00266 Aminotransferase class-V 4 350 9.7E-64 T 06-07-2017 IPR000192 Aminotransferase class V domain AM402_RS15435 6939f99126d9c0694885438a9ddfb33a 362 Gene3D G3DSA:3.40.640.10 17 259 2.8E-101 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS15435 6939f99126d9c0694885438a9ddfb33a 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 06-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM402_RS15435 6939f99126d9c0694885438a9ddfb33a 362 Gene3D G3DSA:3.90.1150.10 260 361 2.6E-41 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS15435 6939f99126d9c0694885438a9ddfb33a 362 PIRSF PIRSF000525 1 362 1.0E-148 T 06-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM402_RS15435 6939f99126d9c0694885438a9ddfb33a 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 3.8E-154 T 06-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM402_RS15435 6939f99126d9c0694885438a9ddfb33a 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 51.531 T 06-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 Gene3D G3DSA:3.40.50.2300 54 176 5.0E-41 T 06-07-2017 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 9.5E-41 T 06-07-2017 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 Gene3D G3DSA:3.40.50.2300 177 308 8.4E-56 T 06-07-2017 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 SUPERFAMILY SSF47413 1 59 4.14E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.7E-19 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 Gene3D G3DSA:1.10.260.40 2 53 2.8E-24 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 SUPERFAMILY SSF53822 60 337 1.43E-95 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 SMART SM00354 1 71 9.9E-37 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 61.523 T 06-07-2017 IPR023588 Transcription regulator HTH, PurR GO:0006355 AM402_RS11335 a4f24e5d15718ab1244b26acc0939eaf 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 AM402_RS02015 16befd9ab96735b7bf9536a1828d4bab 306 Gene3D G3DSA:3.90.1670.10 25 305 3.4E-100 T 06-07-2017 IPR024064 FdhE-like AM402_RS02015 16befd9ab96735b7bf9536a1828d4bab 306 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 303 2.3E-113 T 06-07-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM402_RS02015 16befd9ab96735b7bf9536a1828d4bab 306 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 304 9.3E-118 T 06-07-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM402_RS02015 16befd9ab96735b7bf9536a1828d4bab 306 Hamap MF_00611 Protein FdhE [fdhE]. 3 305 45.988 T 06-07-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM402_RS02015 16befd9ab96735b7bf9536a1828d4bab 306 SUPERFAMILY SSF144020 25 305 2.09E-92 T 06-07-2017 IPR024064 FdhE-like AM402_RS02015 16befd9ab96735b7bf9536a1828d4bab 306 PIRSF PIRSF018296 1 306 1.9E-127 T 06-07-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Gene3D G3DSA:2.150.10.10 434 516 4.1E-21 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Gene3D G3DSA:2.150.10.10 365 396 4.1E-21 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 500 513 4.4 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 433 449 0.83 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 469 486 3.8E-4 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 521 537 0.39 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 546 555 6.4 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 451 467 0.027 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Pfam PF08548 Peptidase M10 serralysin C terminal 350 641 1.1E-42 T 06-07-2017 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 SUPERFAMILY SSF55486 128 221 3.9E-21 T 06-07-2017 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 SUPERFAMILY SSF55486 275 347 3.9E-21 T 06-07-2017 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 SUPERFAMILY SSF51120 349 484 1.31E-27 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 SUPERFAMILY SSF51120 465 584 9.59E-21 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Pfam PF00413 Matrixin 137 296 2.6E-6 T 06-07-2017 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Gene3D G3DSA:3.40.390.10 116 226 1.1E-22 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 Gene3D G3DSA:3.40.390.10 273 350 1.1E-22 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 PRINTS PR00313 NodO calcium binding signature 461 469 5.2E-11 T 06-07-2017 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 PRINTS PR00313 NodO calcium binding signature 449 460 5.2E-11 T 06-07-2017 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 PRINTS PR00313 NodO calcium binding signature 470 478 5.2E-11 T 06-07-2017 AM402_RS18060 9b1b0d29d857dfaf648128dac7609245 649 PRINTS PR00313 NodO calcium binding signature 548 557 5.2E-11 T 06-07-2017 AM402_RS07965 582931932496e338cdad6a293f5e59ef 182 Pfam PF13505 Outer membrane protein beta-barrel domain 7 182 3.6E-13 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel AM402_RS07965 582931932496e338cdad6a293f5e59ef 182 Gene3D G3DSA:2.40.160.20 26 182 2.3E-30 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS07965 582931932496e338cdad6a293f5e59ef 182 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 174 182 - T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS07965 582931932496e338cdad6a293f5e59ef 182 SUPERFAMILY SSF56925 27 182 7.85E-21 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS07965 582931932496e338cdad6a293f5e59ef 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 6.3E-19 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS07965 582931932496e338cdad6a293f5e59ef 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 100 123 6.3E-19 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS07965 582931932496e338cdad6a293f5e59ef 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 143 164 6.3E-19 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS07965 582931932496e338cdad6a293f5e59ef 182 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 170 181 6.3E-19 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS02075 124f186e8299c22dde2cda2c25847bce 303 Gene3D G3DSA:3.30.420.40 133 273 4.9E-47 T 06-07-2017 AM402_RS02075 124f186e8299c22dde2cda2c25847bce 303 Gene3D G3DSA:3.30.420.40 1 132 9.4E-38 T 06-07-2017 AM402_RS02075 124f186e8299c22dde2cda2c25847bce 303 Pfam PF00480 ROK family 2 299 1.1E-73 T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM402_RS02075 124f186e8299c22dde2cda2c25847bce 303 SUPERFAMILY SSF53067 1 300 6.48E-59 T 06-07-2017 AM402_RS02075 124f186e8299c22dde2cda2c25847bce 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 06-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 SMART SM00382 28 230 9.6E-15 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 SMART SM00382 344 514 3.0E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 Gene3D G3DSA:3.40.50.300 321 565 5.6E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 Gene3D G3DSA:3.40.50.300 136 282 1.8E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 Gene3D G3DSA:3.40.50.300 6 102 1.8E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 Pfam PF16326 ABC transporter C-terminal domain 569 637 1.1E-16 T 06-07-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 SUPERFAMILY SSF52540 3 94 2.49E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 SUPERFAMILY SSF52540 126 243 2.49E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 Pfam PF12848 ABC transporter 224 298 1.5E-12 T 06-07-2017 IPR032781 ABC-transporter extension domain AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 SUPERFAMILY SSF52540 311 501 9.91E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 Pfam PF00005 ABC transporter 336 469 4.6E-25 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15075 c07f058b0a46b1dc11491106a18c0195 643 Pfam PF00005 ABC transporter 19 185 4.4E-22 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS12855 d7644a4435eae373cbffe13570502ca2 194 Gene3D G3DSA:2.60.40.1090 63 173 4.7E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS12855 d7644a4435eae373cbffe13570502ca2 194 SUPERFAMILY SSF49401 55 173 7.46E-12 T 06-07-2017 IPR008966 Adhesion domain AM402_RS12855 d7644a4435eae373cbffe13570502ca2 194 Pfam PF00419 Fimbrial protein 31 174 4.0E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06455 9ef014545270f30745d2c85a902af0b8 243 PIRSF PIRSF000857 3 243 3.4E-54 T 06-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM402_RS06455 9ef014545270f30745d2c85a902af0b8 243 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 5.6E-50 T 06-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM402_RS06455 9ef014545270f30745d2c85a902af0b8 243 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 11 243 38.79 T 06-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM402_RS06455 9ef014545270f30745d2c85a902af0b8 243 Gene3D G3DSA:3.40.50.620 14 216 1.9E-63 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS06455 9ef014545270f30745d2c85a902af0b8 243 SUPERFAMILY SSF52402 20 208 1.29E-54 T 06-07-2017 AM402_RS06455 9ef014545270f30745d2c85a902af0b8 243 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 35 243 1.1E-86 T 06-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM402_RS06455 9ef014545270f30745d2c85a902af0b8 243 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 4.1E-92 T 06-07-2017 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AM402_RS17080 e8d29e9ad993d7b6302e29b4319f6d3d 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 6.6E-30 T 06-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17080 e8d29e9ad993d7b6302e29b4319f6d3d 82 SUPERFAMILY SSF54565 1 76 4.71E-29 T 06-07-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17080 e8d29e9ad993d7b6302e29b4319f6d3d 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.381 T 06-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17080 e8d29e9ad993d7b6302e29b4319f6d3d 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 06-07-2017 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS17080 e8d29e9ad993d7b6302e29b4319f6d3d 82 Pfam PF00886 Ribosomal protein S16 8 68 8.1E-25 T 06-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS17080 e8d29e9ad993d7b6302e29b4319f6d3d 82 Gene3D G3DSA:3.30.1320.10 1 79 3.6E-33 T 06-07-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS08945 e864df878c25b1ccdc783d0f8e6a1117 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 06-07-2017 IPR018201 Beta-ketoacyl synthase, active site AM402_RS08945 e864df878c25b1ccdc783d0f8e6a1117 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 4.0E-41 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AM402_RS08945 e864df878c25b1ccdc783d0f8e6a1117 403 SUPERFAMILY SSF53901 213 401 1.07E-62 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08945 e864df878c25b1ccdc783d0f8e6a1117 403 Gene3D G3DSA:3.40.47.10 6 257 4.3E-60 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08945 e864df878c25b1ccdc783d0f8e6a1117 403 SMART SM00825 Beta-ketoacyl synthase 4 403 6.9E-15 T 06-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM402_RS08945 e864df878c25b1ccdc783d0f8e6a1117 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 4.4E-30 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal AM402_RS08945 e864df878c25b1ccdc783d0f8e6a1117 403 SUPERFAMILY SSF53901 1 251 1.94E-63 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS08945 e864df878c25b1ccdc783d0f8e6a1117 403 Gene3D G3DSA:3.40.47.10 261 402 1.2E-50 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS12790 3fe0b28ed7af22872ddcff8acd35cab7 797 Pfam PF13954 PapC N-terminal domain 28 159 1.9E-21 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS12790 3fe0b28ed7af22872ddcff8acd35cab7 797 Pfam PF13953 PapC C-terminal domain 718 778 2.6E-14 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS12790 3fe0b28ed7af22872ddcff8acd35cab7 797 SUPERFAMILY SSF141729 30 135 3.66E-13 T 06-07-2017 AM402_RS12790 3fe0b28ed7af22872ddcff8acd35cab7 797 Pfam PF00577 Outer membrane usher protein 176 703 1.6E-89 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS12790 3fe0b28ed7af22872ddcff8acd35cab7 797 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 283 293 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site AM402_RS00560 d749a88ecc002352d557108cedcbc5b6 274 Gene3D G3DSA:3.10.310.10 1 121 1.6E-49 T 06-07-2017 AM402_RS00560 d749a88ecc002352d557108cedcbc5b6 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.216 T 06-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM402_RS00560 d749a88ecc002352d557108cedcbc5b6 274 Gene3D G3DSA:3.10.310.10 122 262 7.1E-52 T 06-07-2017 AM402_RS00560 d749a88ecc002352d557108cedcbc5b6 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 272 3.3E-101 T 06-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM402_RS00560 d749a88ecc002352d557108cedcbc5b6 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.0E-32 T 06-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM402_RS00560 d749a88ecc002352d557108cedcbc5b6 274 Pfam PF01678 Diaminopimelate epimerase 152 266 1.9E-32 T 06-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM402_RS00560 d749a88ecc002352d557108cedcbc5b6 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 06-07-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM402_RS00560 d749a88ecc002352d557108cedcbc5b6 274 SUPERFAMILY SSF54506 2 274 1.26E-53 T 06-07-2017 AM402_RS11620 80f39e1cc252702fb8965096cc348540 251 Pfam PF02368 Bacterial Ig-like domain (group 2) 166 246 3.4E-15 T 06-07-2017 IPR003343 Bacterial Ig-like, group 2 AM402_RS11620 80f39e1cc252702fb8965096cc348540 251 SMART SM00635 165 245 1.0E-18 T 06-07-2017 IPR003343 Bacterial Ig-like, group 2 AM402_RS11620 80f39e1cc252702fb8965096cc348540 251 Gene3D G3DSA:2.60.40.1080 163 249 3.2E-13 T 06-07-2017 AM402_RS11620 80f39e1cc252702fb8965096cc348540 251 SUPERFAMILY SSF49373 162 248 5.49E-10 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS12885 e451125f070cc22953e310b8e362633a 214 Gene3D G3DSA:1.10.357.10 11 199 1.9E-22 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS12885 e451125f070cc22953e310b8e362633a 214 SUPERFAMILY SSF46689 12 85 7.18E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12885 e451125f070cc22953e310b8e362633a 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 2.7E-12 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS12885 e451125f070cc22953e310b8e362633a 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 3.0E-6 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS12885 e451125f070cc22953e310b8e362633a 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 3.0E-6 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS09055 4e26ce21abfea2806ff04b4fe2e4093f 47 PRINTS PR00281 Hok/Gef cell toxic protein family signature 24 46 5.5E-8 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS09055 4e26ce21abfea2806ff04b4fe2e4093f 47 PRINTS PR00281 Hok/Gef cell toxic protein family signature 4 22 5.5E-8 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS09055 4e26ce21abfea2806ff04b4fe2e4093f 47 Pfam PF01848 Hok/gef family 5 45 1.2E-15 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS09055 4e26ce21abfea2806ff04b4fe2e4093f 47 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 6 46 6.0E-4 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS16330 18852706170ab62967f100574231cb8d 360 Gene3D G3DSA:2.60.40.1090 216 360 4.9E-26 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS16330 18852706170ab62967f100574231cb8d 360 Pfam PF00419 Fimbrial protein 211 360 2.8E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS16330 18852706170ab62967f100574231cb8d 360 SUPERFAMILY SSF49401 217 360 2.29E-21 T 06-07-2017 IPR008966 Adhesion domain AM402_RS12205 4aefe0182e8eeb5c9ae4a04ae8faa267 333 Gene3D G3DSA:3.20.20.140 5 330 7.2E-98 T 06-07-2017 AM402_RS12205 4aefe0182e8eeb5c9ae4a04ae8faa267 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.99 T 06-07-2017 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AM402_RS12205 4aefe0182e8eeb5c9ae4a04ae8faa267 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 06-07-2017 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 AM402_RS12205 4aefe0182e8eeb5c9ae4a04ae8faa267 333 SUPERFAMILY SSF51556 5 323 4.26E-74 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS12205 4aefe0182e8eeb5c9ae4a04ae8faa267 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 9.4E-111 T 06-07-2017 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AM402_RS12205 4aefe0182e8eeb5c9ae4a04ae8faa267 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 9.4E-95 T 06-07-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 7.3E-161 T 06-07-2017 IPR020823 Cell division protein FtsA GO:0007049 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 SUPERFAMILY SSF53067 198 384 3.02E-48 T 06-07-2017 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 Gene3D G3DSA:3.90.640.10 235 297 2.5E-18 T 06-07-2017 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 7.8E-30 T 06-07-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 Gene3D G3DSA:3.30.420.40 169 209 1.8E-5 T 06-07-2017 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 Gene3D G3DSA:3.30.420.40 298 359 1.3E-29 T 06-07-2017 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 Gene3D G3DSA:3.30.420.40 210 234 1.3E-29 T 06-07-2017 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.591 T 06-07-2017 IPR020823 Cell division protein FtsA GO:0007049 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 Pfam PF14450 Cell division protein FtsA 207 381 1.5E-25 T 06-07-2017 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 SMART SM00842 10 196 5.8E-96 T 06-07-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 Gene3D G3DSA:3.30.420.40 6 138 1.9E-32 T 06-07-2017 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 SUPERFAMILY SSF53067 8 221 3.11E-61 T 06-07-2017 AM402_RS07465 6598c255be19208c2f3b734d7cdcc7b9 418 PIRSF PIRSF003101 2 418 4.5E-152 T 06-07-2017 IPR020823 Cell division protein FtsA GO:0007049 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 SMART SM00977 366 438 3.4E-16 T 06-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 SUPERFAMILY SSF82829 236 319 6.93E-23 T 06-07-2017 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 SUPERFAMILY SSF52402 12 234 2.79E-61 T 06-07-2017 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 Pfam PF01171 PP-loop family 21 199 3.0E-56 T 06-07-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 368 412 1.0E-8 T 06-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 204 1.1E-53 T 06-07-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 Gene3D G3DSA:3.40.50.620 9 180 1.3E-13 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 SUPERFAMILY SSF56037 326 430 6.02E-23 T 06-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 Pfam PF09179 TilS substrate binding domain 249 316 1.7E-18 T 06-07-2017 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 Pfam PF11734 TilS substrate C-terminal domain 366 438 1.3E-21 T 06-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM402_RS06335 21bc418603f7af2f3e377de02bc5e912 441 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 311 23.511 T 06-07-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM402_RS16790 056e5c1e25e1c2644de556750c6523b6 224 SUPERFAMILY SSF161098 14 209 3.53E-39 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS16790 056e5c1e25e1c2644de556750c6523b6 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 1.9E-24 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM402_RS16790 056e5c1e25e1c2644de556750c6523b6 224 Gene3D G3DSA:1.10.3720.10 14 223 3.3E-45 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS16790 056e5c1e25e1c2644de556750c6523b6 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 7.4E-17 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS15910 5a90e28f6d19595b64f60ff6daf62227 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 6.8E-62 T 06-07-2017 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 SMART SM00304 180 232 2.3E-9 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 SMART SM00387 332 440 1.8E-25 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 290 4.9E-10 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 SUPERFAMILY SSF55874 293 440 2.88E-31 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 3.2E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 3.2E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 3.2E-12 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 SUPERFAMILY SSF47384 226 289 6.67E-12 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 Pfam PF00672 HAMP domain 165 228 1.6E-11 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 Gene3D G3DSA:3.30.565.10 297 445 3.3E-32 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 SMART SM00388 233 293 2.1E-10 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 Gene3D G3DSA:1.10.287.130 224 289 1.8E-18 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS03180 d25e0b1e79bbf8d03062c3c1213de64c 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 438 1.1E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 SUPERFAMILY SSF56784 398 571 6.36E-37 T 06-07-2017 IPR023214 HAD-like domain AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 SUPERFAMILY SSF56784 307 327 6.36E-37 T 06-07-2017 IPR023214 HAD-like domain AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 543 555 3.8E-24 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 539 3.8E-24 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 152 166 3.8E-24 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 309 323 3.8E-24 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 467 477 3.8E-24 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 Gene3D G3DSA:2.70.150.10 43 206 3.2E-22 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 6 684 39.786 T 06-07-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 70 343 6.2E-33 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 377 604 1.4E-46 T 06-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 Pfam PF00122 E1-E2 ATPase 70 300 2.9E-41 T 06-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 311 317 - T 06-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 680 0.0 T 06-07-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 SUPERFAMILY SSF81653 118 205 7.98E-20 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 Pfam PF00702 haloacid dehalogenase-like hydrolase 305 534 2.7E-35 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 Gene3D G3DSA:3.40.1110.10 320 447 7.2E-50 T 06-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 SUPERFAMILY SSF81665 206 303 4.97E-13 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 SUPERFAMILY SSF81665 28 101 4.97E-13 T 06-07-2017 AM402_RS12625 768c5edb86e4c4473cf9c94a41057cf5 685 Gene3D G3DSA:3.40.50.1000 448 567 2.6E-35 T 06-07-2017 IPR023214 HAD-like domain AM402_RS07070 236fe1afd6bd54e125a9a58644ee472e 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 204 1.0E-73 T 06-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM402_RS07070 236fe1afd6bd54e125a9a58644ee472e 212 Pfam PF01081 KDPG and KHG aldolase 7 199 7.6E-70 T 06-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM402_RS07070 236fe1afd6bd54e125a9a58644ee472e 212 Gene3D G3DSA:3.20.20.70 2 209 3.5E-69 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS07070 236fe1afd6bd54e125a9a58644ee472e 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 06-07-2017 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM402_RS07070 236fe1afd6bd54e125a9a58644ee472e 212 SUPERFAMILY SSF51569 3 208 3.11E-62 T 06-07-2017 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 SMART SM01060 7 391 1.6E-283 T 06-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 06-07-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 SUPERFAMILY SSF56634 3 476 2.09E-213 T 06-07-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 Pfam PF00199 Catalase 7 386 3.3E-188 T 06-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 PIRSF PIRSF038928 1 481 5.0E-221 T 06-07-2017 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 Gene3D G3DSA:2.40.180.10 2 357 2.4E-175 T 06-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 PRINTS PR00067 Catalase signature 320 346 2.7E-72 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 PRINTS PR00067 Catalase signature 20 43 2.7E-72 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 PRINTS PR00067 Catalase signature 123 141 2.7E-72 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 PRINTS PR00067 Catalase signature 288 315 2.7E-72 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 PRINTS PR00067 Catalase signature 83 101 2.7E-72 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 PRINTS PR00067 Catalase signature 104 121 2.7E-72 T 06-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 06-07-2017 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS09225 017aa4dea2678ca6bbb8556c0345b633 484 Pfam PF06628 Catalase-related immune-responsive 414 474 9.3E-21 T 06-07-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 Gene3D G3DSA:3.30.1840.10 109 304 2.3E-52 T 06-07-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 Pfam PF02503 Polyphosphate kinase middle domain 122 323 3.3E-43 T 06-07-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 681 6.5E-256 T 06-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 112 3.8E-32 T 06-07-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 SUPERFAMILY SSF143724 110 315 3.14E-59 T 06-07-2017 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 Gene3D G3DSA:3.30.870.10 319 503 2.3E-73 T 06-07-2017 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 Gene3D G3DSA:3.30.870.10 504 686 6.2E-71 T 06-07-2017 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 685 33.917 T 06-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 Pfam PF13090 Polyphosphate kinase C-terminal domain 335 680 4.4E-145 T 06-07-2017 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 SUPERFAMILY SSF56024 504 686 9.42E-70 T 06-07-2017 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 SUPERFAMILY SSF56024 319 502 9.42E-55 T 06-07-2017 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 SUPERFAMILY SSF140356 3 108 2.75E-32 T 06-07-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM402_RS10115 ef06557822e5b7f26520141fcab813ff 693 PIRSF PIRSF015589 1 692 3.5E-245 T 06-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM402_RS21555 36d2a159266f60550d47ee82594565bd 100 Gene3D G3DSA:1.10.260.40 26 84 1.1E-10 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS21555 36d2a159266f60550d47ee82594565bd 100 SMART SM00530 32 91 8.1E-4 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS21555 36d2a159266f60550d47ee82594565bd 100 Pfam PF13744 Helix-turn-helix domain 15 88 2.2E-9 T 06-07-2017 AM402_RS21555 36d2a159266f60550d47ee82594565bd 100 SUPERFAMILY SSF47413 20 95 7.78E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS13285 d18b3db8527bb187423ab100b8a2b233 344 Pfam PF16868 NMT1-like family 37 325 7.8E-111 T 06-07-2017 IPR011852 TRAP transporter solute receptor, TAXI family AM402_RS13285 d18b3db8527bb187423ab100b8a2b233 344 SUPERFAMILY SSF53850 32 326 3.4E-59 T 06-07-2017 AM402_RS13285 d18b3db8527bb187423ab100b8a2b233 344 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 325 1.1E-87 T 06-07-2017 IPR011852 TRAP transporter solute receptor, TAXI family AM402_RS13285 d18b3db8527bb187423ab100b8a2b233 344 Gene3D G3DSA:3.40.190.10 140 257 1.8E-18 T 06-07-2017 AM402_RS13285 d18b3db8527bb187423ab100b8a2b233 344 Gene3D G3DSA:3.40.190.10 258 326 2.8E-53 T 06-07-2017 AM402_RS13285 d18b3db8527bb187423ab100b8a2b233 344 Gene3D G3DSA:3.40.190.10 32 115 2.8E-53 T 06-07-2017 AM402_RS13325 43fd903096092c87f40d0bba30a86f1f 113 Pfam PF00892 EamA-like transporter family 2 110 1.3E-9 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS13325 43fd903096092c87f40d0bba30a86f1f 113 SUPERFAMILY SSF103481 34 112 1.96E-12 T 06-07-2017 AM402_RS13325 43fd903096092c87f40d0bba30a86f1f 113 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 113 30.805 T 06-07-2017 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE AM402_RS08250 72fb00fcf211e6a80693475b4a2262f6 103 Gene3D G3DSA:3.30.460.10 24 100 4.0E-13 T 06-07-2017 AM402_RS08250 72fb00fcf211e6a80693475b4a2262f6 103 SUPERFAMILY SSF81301 34 91 4.58E-9 T 06-07-2017 AM402_RS08250 72fb00fcf211e6a80693475b4a2262f6 103 Pfam PF01909 Nucleotidyltransferase domain 40 85 1.6E-4 T 06-07-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 SUPERFAMILY SSF63882 9 179 5.89E-55 T 06-07-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 06-07-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 Gene3D G3DSA:3.40.980.10 166 330 3.1E-63 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 SUPERFAMILY SSF63867 330 410 3.53E-22 T 06-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 SMART SM00852 183 320 8.0E-42 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 Gene3D G3DSA:2.170.190.11 53 133 5.0E-32 T 06-07-2017 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 Gene3D G3DSA:2.40.340.10 332 404 2.4E-31 T 06-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 SUPERFAMILY SSF53218 180 324 9.68E-43 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 316 1.4E-32 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 2.1E-36 T 06-07-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 Gene3D G3DSA:3.90.105.10 134 165 4.1E-20 T 06-07-2017 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 Pfam PF03454 MoeA C-terminal region (domain IV) 335 406 3.9E-15 T 06-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15790 8271d487e308e68dc763e1941b1488d7 413 Pfam PF00994 Probable molybdopterin binding domain 183 319 1.9E-25 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS06145 5b78807ec0de77aae8f716a321515265 364 Gene3D G3DSA:2.40.40.10 166 353 1.3E-45 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM402_RS06145 5b78807ec0de77aae8f716a321515265 364 Gene3D G3DSA:2.40.40.10 73 160 3.4E-15 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM402_RS06145 5b78807ec0de77aae8f716a321515265 364 PIRSF PIRSF019422 2 361 1.2E-84 T 06-07-2017 IPR026044 Membrane-bound lytic murein transglycosylase A AM402_RS06145 5b78807ec0de77aae8f716a321515265 364 SUPERFAMILY SSF50685 23 353 3.31E-111 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM402_RS06145 5b78807ec0de77aae8f716a321515265 364 Pfam PF03562 MltA specific insert domain 75 256 2.6E-41 T 06-07-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 AM402_RS06145 5b78807ec0de77aae8f716a321515265 364 Pfam PF06725 3D domain 276 353 3.2E-25 T 06-07-2017 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AM402_RS06145 5b78807ec0de77aae8f716a321515265 364 SMART SM00925 123 256 4.0E-67 T 06-07-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 Pfam PF13307 Helicase C-terminal domain 463 618 2.5E-33 T 06-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 Pfam PF06733 DEAD_2 179 249 1.0E-4 T 06-07-2017 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 SUPERFAMILY SSF52540 575 600 1.85E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 SUPERFAMILY SSF52540 43 90 1.85E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 SUPERFAMILY SSF52540 479 544 1.85E-10 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 Pfam PF00270 DEAD/DEAH box helicase 34 84 1.6E-4 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 SMART SM00487 18 344 0.0081 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 SMART SM00491 476 605 1.1E-48 T 06-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 Gene3D G3DSA:3.40.50.300 192 238 1.1E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 Gene3D G3DSA:3.40.50.300 21 118 1.1E-16 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 SUPERFAMILY SSF52540 17 234 4.84E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 SMART SM00488 13 272 0.0056 T 06-07-2017 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 AM402_RS12965 6d9f7f7d89f15c58a3e42612233f4320 645 Gene3D G3DSA:3.40.50.300 461 601 6.0E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 79.97 T 06-07-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 283 4.0E-116 T 06-07-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 Gene3D G3DSA:3.30.479.20 229 264 1.1E-30 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 Gene3D G3DSA:3.30.479.20 145 180 1.1E-30 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 Gene3D G3DSA:3.30.479.20 57 113 4.0E-14 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 SUPERFAMILY SSF54713 56 141 1.32E-21 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 SUPERFAMILY SSF54713 145 281 6.41E-53 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 06-07-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 Gene3D G3DSA:1.10.286.20 185 228 1.3E-21 T 06-07-2017 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 Pfam PF00889 Elongation factor TS 73 265 8.6E-68 T 06-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 SUPERFAMILY SSF46934 4 55 5.33E-19 T 06-07-2017 IPR009060 UBA-like GO:0005515 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 Gene3D G3DSA:1.10.8.10 4 55 2.8E-28 T 06-07-2017 AM402_RS06250 3973b191b492698d4ce6880b365cb947 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 06-07-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 SUPERFAMILY SSF52374 1 156 5.89E-42 T 06-07-2017 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.7E-46 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.7E-46 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.7E-46 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 2.7E-46 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 2.7E-46 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 2.1E-16 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.43 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 Pfam PF01467 Cytidylyltransferase-like 6 133 1.6E-22 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.9E-57 T 06-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AM402_RS01750 bc9e20e60b2a0222bd82e59ba1899797 161 Gene3D G3DSA:3.40.50.620 1 157 3.6E-52 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS00510 50844adf0bea33c141f97597bbe92efe 334 Pfam PF12146 Serine aminopeptidase, S33 54 315 2.7E-53 T 06-07-2017 IPR022742 Serine aminopeptidase, S33 AM402_RS00510 50844adf0bea33c141f97597bbe92efe 334 SUPERFAMILY SSF53474 24 317 5.69E-36 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS00510 50844adf0bea33c141f97597bbe92efe 334 Gene3D G3DSA:3.40.50.1820 31 311 5.2E-38 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 SUPERFAMILY SSF51735 11 248 1.02E-83 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.8E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.8E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.8E-41 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.1E-10 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-10 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.1E-10 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 247 2.7E-69 T 06-07-2017 AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 Gene3D G3DSA:3.40.50.720 6 248 1.9E-87 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS02580 647c6fbfd0bda3151d3de61568fc4d86 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 186 0.0022 T 06-07-2017 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.5E-5 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.5E-5 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.5E-5 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 SUPERFAMILY SSF46955 1 126 2.42E-33 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 SMART SM00422 1 70 1.2E-25 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 Pfam PF13411 MerR HTH family regulatory protein 2 67 4.1E-18 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.6E-52 T 06-07-2017 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 Gene3D G3DSA:1.10.1660.10 55 131 1.2E-23 T 06-07-2017 AM402_RS06800 9166042936223adedc0e0db50384a1cd 133 Gene3D G3DSA:1.10.1660.10 2 54 6.0E-23 T 06-07-2017 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 Pfam PF00814 Glycoprotease family 24 306 8.2E-103 T 06-07-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.1E-135 T 06-07-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 SUPERFAMILY SSF53067 1 309 4.17E-43 T 06-07-2017 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 06-07-2017 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.54 T 06-07-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 Gene3D G3DSA:3.30.420.40 1 159 1.9E-49 T 06-07-2017 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 2.3E-127 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 8.6E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 8.6E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 8.6E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 8.6E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 8.6E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS05840 3c0da1c9780343fcdd6929655c5d2cbc 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 8.6E-53 T 06-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM402_RS12025 ed467d5262757a7b8eb14595a31dc800 196 SUPERFAMILY SSF52540 7 196 7.61E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12025 ed467d5262757a7b8eb14595a31dc800 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 1.4E-6 T 06-07-2017 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM402_RS12025 ed467d5262757a7b8eb14595a31dc800 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 9.8E-62 T 06-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM402_RS12025 ed467d5262757a7b8eb14595a31dc800 196 PIRSF PIRSF015617 1 196 2.8E-69 T 06-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM402_RS12025 ed467d5262757a7b8eb14595a31dc800 196 Gene3D G3DSA:3.40.50.300 3 196 9.0E-78 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12025 ed467d5262757a7b8eb14595a31dc800 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 2.4E-75 T 06-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM402_RS16060 4254ac0f1a20ae7073afa1fec7ca3458 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 06-07-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AM402_RS16060 4254ac0f1a20ae7073afa1fec7ca3458 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 5.0E-126 T 06-07-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AM402_RS16060 4254ac0f1a20ae7073afa1fec7ca3458 250 SMART SM00855 5 191 1.6E-28 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AM402_RS16060 4254ac0f1a20ae7073afa1fec7ca3458 250 SUPERFAMILY SSF53254 4 247 8.32E-77 T 06-07-2017 IPR029033 Histidine phosphatase superfamily AM402_RS16060 4254ac0f1a20ae7073afa1fec7ca3458 250 Gene3D G3DSA:3.40.50.1240 2 250 9.9E-100 T 06-07-2017 IPR029033 Histidine phosphatase superfamily AM402_RS16060 4254ac0f1a20ae7073afa1fec7ca3458 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 45.868 T 06-07-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AM402_RS16060 4254ac0f1a20ae7073afa1fec7ca3458 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 146 227 4.7E-5 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AM402_RS16060 4254ac0f1a20ae7073afa1fec7ca3458 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 5.3E-30 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AM402_RS19700 197060ac16a39a37a46040806227f9bf 84 Pfam PF01722 BolA-like protein 22 74 2.5E-16 T 06-07-2017 IPR002634 BolA protein AM402_RS19700 197060ac16a39a37a46040806227f9bf 84 Gene3D G3DSA:3.30.300.90 1 80 8.7E-29 T 06-07-2017 IPR002634 BolA protein AM402_RS19700 197060ac16a39a37a46040806227f9bf 84 SUPERFAMILY SSF82657 2 81 5.1E-30 T 06-07-2017 IPR002634 BolA protein AM402_RS19700 197060ac16a39a37a46040806227f9bf 84 PIRSF PIRSF003113 1 83 8.0E-24 T 06-07-2017 IPR002634 BolA protein AM402_RS00860 2523e2227c4c018480b23d0891ab439b 135 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 29.836 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM402_RS00860 2523e2227c4c018480b23d0891ab439b 135 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 3.5E-46 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM402_RS00860 2523e2227c4c018480b23d0891ab439b 135 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 06-07-2017 IPR019823 Large-conductance mechanosensitive channel, conserved site AM402_RS00860 2523e2227c4c018480b23d0891ab439b 135 SUPERFAMILY SSF81330 12 127 5.62E-36 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM402_RS00860 2523e2227c4c018480b23d0891ab439b 135 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 8.2E-13 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM402_RS00860 2523e2227c4c018480b23d0891ab439b 135 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 8.2E-13 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM402_RS00860 2523e2227c4c018480b23d0891ab439b 135 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 8.2E-13 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM402_RS00860 2523e2227c4c018480b23d0891ab439b 135 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 2.4E-55 T 06-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM402_RS18570 2fd3d6980285932870a286222555a109 278 Pfam PF03239 Iron permease FTR1 family 3 264 6.3E-27 T 06-07-2017 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 AM402_RS04025 6a9520c237233dff40f179c0c4fd0443 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 06-07-2017 IPR020808 Bacterial microcompartments protein, conserved site AM402_RS04025 6a9520c237233dff40f179c0c4fd0443 94 SMART SM00877 3 79 1.3E-35 T 06-07-2017 IPR000249 Microcompartment protein, bacteria AM402_RS04025 6a9520c237233dff40f179c0c4fd0443 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 43 6.0E-16 T 06-07-2017 AM402_RS04025 6a9520c237233dff40f179c0c4fd0443 94 SUPERFAMILY SSF143414 3 89 5.1E-31 T 06-07-2017 AM402_RS04025 6a9520c237233dff40f179c0c4fd0443 94 Pfam PF00936 BMC domain 4 79 2.3E-28 T 06-07-2017 IPR000249 Microcompartment protein, bacteria AM402_RS09030 525d1c120fa9e9fbc348f7762ec8e1c3 147 SUPERFAMILY SSF55804 1 146 4.58E-42 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM402_RS09030 525d1c120fa9e9fbc348f7762ec8e1c3 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain AM402_RS09030 525d1c120fa9e9fbc348f7762ec8e1c3 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.5E-39 T 06-07-2017 IPR002178 PTS EIIA type-2 domain AM402_RS09030 525d1c120fa9e9fbc348f7762ec8e1c3 147 Gene3D G3DSA:3.40.930.10 1 146 6.8E-57 T 06-07-2017 IPR002178 PTS EIIA type-2 domain AM402_RS02830 0ce7fc387c371090c9ccc1f984bfa638 499 Pfam PF07690 Major Facilitator Superfamily 16 288 1.1E-31 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS02830 0ce7fc387c371090c9ccc1f984bfa638 499 Gene3D G3DSA:1.20.1250.20 465 486 1.0E-17 T 06-07-2017 AM402_RS02830 0ce7fc387c371090c9ccc1f984bfa638 499 Gene3D G3DSA:1.20.1250.20 10 194 4.6E-28 T 06-07-2017 AM402_RS02830 0ce7fc387c371090c9ccc1f984bfa638 499 Gene3D G3DSA:1.20.1250.20 260 415 1.0E-17 T 06-07-2017 AM402_RS02830 0ce7fc387c371090c9ccc1f984bfa638 499 SUPERFAMILY SSF103473 245 414 9.94E-62 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS02830 0ce7fc387c371090c9ccc1f984bfa638 499 SUPERFAMILY SSF103473 464 489 9.94E-62 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS02830 0ce7fc387c371090c9ccc1f984bfa638 499 SUPERFAMILY SSF103473 5 197 9.94E-62 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS05225 da9888a6c35ee579744771f09b7b574b 413 Gene3D G3DSA:1.10.443.10 206 381 2.0E-18 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS05225 da9888a6c35ee579744771f09b7b574b 413 Pfam PF00589 Phage integrase family 207 378 3.4E-12 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS05225 da9888a6c35ee579744771f09b7b574b 413 SUPERFAMILY SSF56349 99 388 2.5E-43 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS05225 da9888a6c35ee579744771f09b7b574b 413 Pfam PF13356 Domain of unknown function (DUF4102) 21 88 4.8E-14 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 AM402_RS05225 da9888a6c35ee579744771f09b7b574b 413 Gene3D G3DSA:1.10.150.130 99 196 2.1E-13 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS12415 a51a5fe03348313e64743168f77cf3a9 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM402_RS12415 a51a5fe03348313e64743168f77cf3a9 394 Gene3D G3DSA:1.20.1250.20 4 185 4.8E-27 T 06-07-2017 AM402_RS12415 a51a5fe03348313e64743168f77cf3a9 394 Pfam PF07690 Major Facilitator Superfamily 9 341 1.1E-40 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS12415 a51a5fe03348313e64743168f77cf3a9 394 Gene3D G3DSA:1.20.1250.20 211 388 4.1E-11 T 06-07-2017 AM402_RS12415 a51a5fe03348313e64743168f77cf3a9 394 SUPERFAMILY SSF103473 4 383 1.44E-52 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS13415 a5a8045f1583213455c823adb0819b1a 198 Pfam PF13302 Acetyltransferase (GNAT) domain 16 154 1.1E-13 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS13415 a5a8045f1583213455c823adb0819b1a 198 SUPERFAMILY SSF55729 7 179 3.16E-37 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS13415 a5a8045f1583213455c823adb0819b1a 198 Gene3D G3DSA:3.40.630.30 8 192 4.3E-52 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 PIRSF PIRSF000729 1 367 1.8E-140 T 06-07-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 06-07-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 SMART SM00359 276 359 2.3E-19 T 06-07-2017 IPR002478 PUA domain GO:0003723 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 SUPERFAMILY SSF88697 276 366 3.98E-21 T 06-07-2017 IPR015947 PUA-like domain AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 SUPERFAMILY SSF53633 6 256 3.27E-67 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 Gene3D G3DSA:2.30.130.10 274 365 9.6E-23 T 06-07-2017 IPR015947 PUA-like domain AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 Pfam PF00696 Amino acid kinase family 6 234 3.7E-44 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 5.1E-151 T 06-07-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 Gene3D G3DSA:3.40.1160.10 3 257 2.1E-58 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 Pfam PF01472 PUA domain 276 350 2.2E-19 T 06-07-2017 IPR002478 PUA domain GO:0003723 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 36.429 T 06-07-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 2.8E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 2.8E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 2.8E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 2.8E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AM402_RS17175 ef5213c5d3c330163ef4c40392130b0e 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 2.8E-56 T 06-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AM402_RS21170 97f41ccc8b773637e2c4f8e3ed5d93e2 355 Pfam PF01758 Sodium Bile acid symporter family 63 257 3.0E-37 T 06-07-2017 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AM402_RS21170 97f41ccc8b773637e2c4f8e3ed5d93e2 355 PIRSF PIRSF005508 4 354 7.3E-119 T 06-07-2017 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AM402_RS21170 97f41ccc8b773637e2c4f8e3ed5d93e2 355 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 344 7.7E-119 T 06-07-2017 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AM402_RS03580 a56557de02e7148428b1685692313518 620 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 46.274 T 06-07-2017 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 AM402_RS03580 a56557de02e7148428b1685692313518 620 Gene3D G3DSA:3.40.50.720 398 530 4.8E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS03580 a56557de02e7148428b1685692313518 620 SUPERFAMILY SSF51735 401 529 2.42E-30 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS03580 a56557de02e7148428b1685692313518 620 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 3.3E-85 T 06-07-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM402_RS03580 a56557de02e7148428b1685692313518 620 Pfam PF02254 TrkA-N domain 402 513 5.6E-25 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM402_RS03580 a56557de02e7148428b1685692313518 620 Pfam PF00999 Sodium/hydrogen exchanger family 11 373 2.2E-67 T 06-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM402_RS12840 fc6cbb49007578b24b46098fffaf8611 185 Pfam PF00419 Fimbrial protein 45 177 1.3E-5 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS12840 fc6cbb49007578b24b46098fffaf8611 185 SUPERFAMILY SSF49401 35 175 1.39E-9 T 06-07-2017 IPR008966 Adhesion domain AM402_RS12840 fc6cbb49007578b24b46098fffaf8611 185 Gene3D G3DSA:2.60.40.1090 36 175 6.4E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS21565 8b9571004ee8d05cd76cf0a7ca802367 90 SUPERFAMILY SSF47729 1 90 8.98E-32 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS21565 8b9571004ee8d05cd76cf0a7ca802367 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM402_RS21565 8b9571004ee8d05cd76cf0a7ca802367 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.4E-18 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS21565 8b9571004ee8d05cd76cf0a7ca802367 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.4E-18 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS21565 8b9571004ee8d05cd76cf0a7ca802367 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.4E-18 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS21565 8b9571004ee8d05cd76cf0a7ca802367 90 SMART SM00411 1 90 4.5E-42 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS21565 8b9571004ee8d05cd76cf0a7ca802367 90 Gene3D G3DSA:4.10.520.10 1 90 3.8E-37 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS21565 8b9571004ee8d05cd76cf0a7ca802367 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.3E-34 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS18520 089d5bd5dfcdf703910c9b8840cdf0a9 343 Gene3D G3DSA:3.40.190.10 269 324 9.7E-36 T 06-07-2017 AM402_RS18520 089d5bd5dfcdf703910c9b8840cdf0a9 343 Gene3D G3DSA:3.40.190.10 3 123 9.7E-36 T 06-07-2017 AM402_RS18520 089d5bd5dfcdf703910c9b8840cdf0a9 343 Pfam PF13343 Bacterial extracellular solute-binding protein 75 290 5.2E-32 T 06-07-2017 AM402_RS18520 089d5bd5dfcdf703910c9b8840cdf0a9 343 PIRSF PIRSF002825 2 340 1.4E-72 T 06-07-2017 IPR026045 Ferric binding protein AM402_RS18520 089d5bd5dfcdf703910c9b8840cdf0a9 343 Gene3D G3DSA:3.40.190.10 129 268 4.0E-48 T 06-07-2017 AM402_RS18520 089d5bd5dfcdf703910c9b8840cdf0a9 343 SUPERFAMILY SSF53850 25 329 2.27E-73 T 06-07-2017 AM402_RS05535 c269f15a2cac4b9d3dd41e3345821a24 177 SUPERFAMILY SSF160930 5 163 2.09E-34 T 06-07-2017 AM402_RS05535 c269f15a2cac4b9d3dd41e3345821a24 177 Pfam PF05280 Flagellar transcriptional activator (FlhC) 11 167 2.6E-16 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM402_RS05535 c269f15a2cac4b9d3dd41e3345821a24 177 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 5 164 9.0E-10 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM402_RS01905 947029488dd62fbab06eb7c5f9c2fece 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 06-07-2017 IPR020539 Ribonuclease P, conserved site GO:0004526 AM402_RS01905 947029488dd62fbab06eb7c5f9c2fece 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 101 1.0E-44 T 06-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM402_RS01905 947029488dd62fbab06eb7c5f9c2fece 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 8.6E-36 T 06-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM402_RS01905 947029488dd62fbab06eb7c5f9c2fece 119 Pfam PF00825 Ribonuclease P 6 111 6.5E-33 T 06-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM402_RS01905 947029488dd62fbab06eb7c5f9c2fece 119 SUPERFAMILY SSF54211 5 117 7.08E-32 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS01905 947029488dd62fbab06eb7c5f9c2fece 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.553 T 06-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM402_RS01905 947029488dd62fbab06eb7c5f9c2fece 119 Gene3D G3DSA:3.30.230.10 5 118 3.0E-34 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.6E-39 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.6E-39 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.6E-39 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.6E-39 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 SUPERFAMILY SSF52210 123 288 5.1E-57 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 Gene3D G3DSA:3.40.50.261 120 287 1.2E-77 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 PIRSF PIRSF001553 1 290 8.6E-135 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 Gene3D G3DSA:3.40.50.720 2 119 3.0E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 SUPERFAMILY SSF51735 1 122 8.72E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 SMART SM00881 4 100 3.3E-37 T 06-07-2017 IPR003781 CoA-binding GO:0048037 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 06-07-2017 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 Pfam PF00549 CoA-ligase 151 271 2.5E-20 T 06-07-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 1.1E-145 T 06-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AM402_RS16160 1c924b1f7ac223dc29cf57cf7c7894a3 290 Pfam PF02629 CoA binding domain 6 99 2.9E-31 T 06-07-2017 IPR003781 CoA-binding GO:0048037 AM402_RS05110 6dec673be6c155d97c727530b7198a67 203 Gene3D G3DSA:3.40.50.300 2 200 1.0E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05110 6dec673be6c155d97c727530b7198a67 203 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS05110 6dec673be6c155d97c727530b7198a67 203 SMART SM00382 28 201 1.0E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS05110 6dec673be6c155d97c727530b7198a67 203 SUPERFAMILY SSF52540 3 201 4.13E-37 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05110 6dec673be6c155d97c727530b7198a67 203 Pfam PF00005 ABC transporter 20 152 2.7E-17 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS01735 d74e4bbbc87d496ce7722ac80a876c0c 367 SUPERFAMILY SSF53756 6 365 2.66E-57 T 06-07-2017 AM402_RS01735 d74e4bbbc87d496ce7722ac80a876c0c 367 Gene3D G3DSA:3.40.50.2000 201 339 1.6E-14 T 06-07-2017 AM402_RS01735 d74e4bbbc87d496ce7722ac80a876c0c 367 Pfam PF13439 Glycosyltransferase Family 4 16 185 2.7E-16 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM402_RS01735 d74e4bbbc87d496ce7722ac80a876c0c 367 Pfam PF00534 Glycosyl transferases group 1 195 338 1.1E-24 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 62 157 3.9E-13 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 SUPERFAMILY SSF51126 51 325 2.23E-34 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Pfam PF05594 Haemagluttinin repeat 670 735 0.39 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Pfam PF05594 Haemagluttinin repeat 327 365 11.0 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Pfam PF05594 Haemagluttinin repeat 781 830 1.1 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Pfam PF05594 Haemagluttinin repeat 469 526 0.0072 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Pfam PF05594 Haemagluttinin repeat 590 615 200.0 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Pfam PF05594 Haemagluttinin repeat 634 662 28.0 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 772 806 2.3 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 677 715 0.23 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 480 514 0.46 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 594 616 0.84 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 517 556 2.5 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 662 696 0.062 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 537 577 1.5 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 334 368 0.073 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 SMART SM00912 44 163 5.9E-15 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Gene3D G3DSA:2.160.20.10 39 289 5.7E-53 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Gene3D G3DSA:2.160.20.10 335 351 5.7E-53 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS03070 360fc340a15a8daadb0acde3ddd6a806 838 Pfam PF05860 haemagglutination activity domain 33 161 1.9E-19 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 Gene3D G3DSA:3.40.50.620 4 151 4.1E-43 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 PRINTS PR00147 DNA photolyase signature 327 343 9.2E-29 T 06-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 PRINTS PR00147 DNA photolyase signature 147 163 9.2E-29 T 06-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 PRINTS PR00147 DNA photolyase signature 347 365 9.2E-29 T 06-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 PRINTS PR00147 DNA photolyase signature 386 400 9.2E-29 T 06-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 SUPERFAMILY SSF52425 7 181 8.63E-52 T 06-07-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 327 339 - T 06-07-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 Pfam PF03441 FAD binding domain of DNA photolyase 277 471 3.1E-83 T 06-07-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 Gene3D G3DSA:1.10.579.10 286 474 1.7E-78 T 06-07-2017 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 Gene3D G3DSA:1.25.40.80 152 166 2.3E-38 T 06-07-2017 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 Gene3D G3DSA:1.25.40.80 204 285 2.3E-38 T 06-07-2017 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 SUPERFAMILY SSF48173 197 475 1.44E-107 T 06-07-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 347 366 - T 06-07-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM402_RS01190 ce5fa8c645aec7b402147ca5cceb1a00 476 Pfam PF00875 DNA photolyase 8 172 7.2E-41 T 06-07-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM402_RS20625 50e0cd7afdd5119dd3ecd9fc779444c6 331 Pfam PF01136 Peptidase family U32 75 330 1.0E-66 T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM402_RS20625 50e0cd7afdd5119dd3ecd9fc779444c6 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM402_RS20625 50e0cd7afdd5119dd3ecd9fc779444c6 331 SUPERFAMILY SSF51391 11 162 5.23E-5 T 06-07-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM402_RS20625 50e0cd7afdd5119dd3ecd9fc779444c6 331 Gene3D G3DSA:3.20.20.150 12 95 3.4E-4 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS07895 5894ac0f16ffcb4744407feb910a9189 302 PIRSF PIRSF020481 1 302 1.7E-125 T 06-07-2017 IPR014507 Baseplate assembly protein J, predicted AM402_RS07895 5894ac0f16ffcb4744407feb910a9189 302 Pfam PF04865 Baseplate J-like protein 119 261 6.7E-25 T 06-07-2017 IPR006949 Baseplate protein J-like AM402_RS19225 d761d1a8309ec374eb31da5199b8f8a8 407 Gene3D G3DSA:3.40.50.300 230 388 2.9E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19225 d761d1a8309ec374eb31da5199b8f8a8 407 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 223 384 1.7E-36 T 06-07-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM402_RS19225 d761d1a8309ec374eb31da5199b8f8a8 407 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 193 405 5.1E-95 T 06-07-2017 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 AM402_RS19225 d761d1a8309ec374eb31da5199b8f8a8 407 SUPERFAMILY SSF52540 200 403 2.19E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14965 54cdf88965d4b7740a6a792a3d0dadf5 110 Gene3D G3DSA:2.60.120.10 4 108 2.9E-39 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS14965 54cdf88965d4b7740a6a792a3d0dadf5 110 SUPERFAMILY SSF51197 4 107 4.53E-34 T 06-07-2017 AM402_RS14965 54cdf88965d4b7740a6a792a3d0dadf5 110 Pfam PF09313 Domain of unknown function (DUF1971) 14 98 5.1E-24 T 06-07-2017 IPR015392 Domain of unknown function DUF1971 AM402_RS14965 54cdf88965d4b7740a6a792a3d0dadf5 110 PIRSF PIRSF020632 3 109 1.1E-36 T 06-07-2017 IPR014510 Tellurite resistance predicted, YeaR AM402_RS17600 7ced83f8fa323beabf1526693a2103d1 138 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 122 2.3E-42 T 06-07-2017 IPR021877 Protein of unknown function DUF3487 AM402_RS17600 7ced83f8fa323beabf1526693a2103d1 138 Pfam PF11990 Protein of unknown function (DUF3487) 2 123 2.4E-42 T 06-07-2017 IPR021877 Protein of unknown function DUF3487 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 Gene3D G3DSA:1.20.1440.90 272 387 5.0E-31 T 06-07-2017 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 06-07-2017 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.195 T 06-07-2017 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 878 8.1E-289 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 06-07-2017 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 3.8E-69 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 3.8E-69 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 3.8E-69 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 3.8E-69 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 3.8E-69 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 3.8E-69 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 3.8E-69 T 06-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AM402_RS01200 fe8b0a7b2b284e4fdfff9d813d3add9a 878 SUPERFAMILY SSF51621 6 878 0.0 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 PIRSF PIRSF000137 1 536 3.7E-135 T 06-07-2017 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 5.0E-281 T 06-07-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 59.972 T 06-07-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 SUPERFAMILY SSF54373 295 477 8.44E-64 T 06-07-2017 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 Gene3D G3DSA:3.50.50.60 3 127 8.1E-119 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 Gene3D G3DSA:3.50.50.60 470 533 8.1E-119 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 Gene3D G3DSA:3.50.50.60 190 318 8.1E-119 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 Pfam PF00732 GMC oxidoreductase 3 300 3.0E-96 T 06-07-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 06-07-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 06-07-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 Pfam PF05199 GMC oxidoreductase 393 527 5.9E-41 T 06-07-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 SUPERFAMILY SSF51905 2 293 6.64E-84 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS11025 6b057b8722ee9e4e1c5dfd2a8230384b 555 SUPERFAMILY SSF51905 476 535 6.64E-84 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS09095 22f458348a147388ec7a9734391ae3c5 193 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 183 5.0E-46 T 06-07-2017 AM402_RS09095 22f458348a147388ec7a9734391ae3c5 193 SUPERFAMILY SSF109604 3 183 3.14E-45 T 06-07-2017 AM402_RS09095 22f458348a147388ec7a9734391ae3c5 193 SMART SM00471 24 149 1.7E-6 T 06-07-2017 IPR003607 HD/PDEase domain AM402_RS09095 22f458348a147388ec7a9734391ae3c5 193 Pfam PF13023 HD domain 9 164 2.3E-18 T 06-07-2017 IPR006674 HD domain AM402_RS09095 22f458348a147388ec7a9734391ae3c5 193 Gene3D G3DSA:1.10.3210.10 3 192 1.6E-50 T 06-07-2017 IPR006674 HD domain AM402_RS09095 22f458348a147388ec7a9734391ae3c5 193 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 44.791 T 06-07-2017 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 SMART SM00869 814 1074 3.7E-25 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 SUPERFAMILY SSF103515 810 1084 8.5E-37 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 SUPERFAMILY SSF103515 763 777 8.5E-37 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 SUPERFAMILY SSF52743 61 102 1.2E-49 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 SUPERFAMILY SSF52743 132 215 1.2E-49 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 SUPERFAMILY SSF52743 257 436 1.2E-49 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 147 157 - T 06-07-2017 IPR022398 Peptidase S8, subtilisin, His-active site AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 542 570 7.2E-10 T 06-07-2017 IPR013425 Autotransporter-associated beta strand repeat AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 Pfam PF00082 Subtilase family 79 426 6.3E-32 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 Gene3D G3DSA:2.40.128.130 813 1084 1.9E-33 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 Pfam PF03797 Autotransporter beta-domain 813 1068 8.4E-26 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 Gene3D G3DSA:3.40.50.200 54 225 2.7E-58 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 Gene3D G3DSA:3.40.50.200 262 434 2.7E-58 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 364 374 - T 06-07-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 PRINTS PR00723 Subtilisin serine protease family (S8) signature 143 156 2.2E-13 T 06-07-2017 IPR015500 Peptidase S8, subtilisin-related AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 PRINTS PR00723 Subtilisin serine protease family (S8) signature 363 379 2.2E-13 T 06-07-2017 IPR015500 Peptidase S8, subtilisin-related AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 PRINTS PR00723 Subtilisin serine protease family (S8) signature 79 98 2.2E-13 T 06-07-2017 IPR015500 Peptidase S8, subtilisin-related AM402_RS05975 3957a2721cd3e8805c170521780cb31e 1084 Pfam PF12951 Passenger-associated-transport-repeat 543 570 9.9E-11 T 06-07-2017 IPR013425 Autotransporter-associated beta strand repeat AM402_RS15280 552ed23fdc45f83860ed2c662581e4f1 183 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 16 173 1.5E-34 T 06-07-2017 IPR017734 Type VI secretion system, lipoprotein SciN AM402_RS15280 552ed23fdc45f83860ed2c662581e4f1 183 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 175 5.2E-36 T 06-07-2017 IPR017734 Type VI secretion system, lipoprotein SciN AM402_RS02480 4c8394e41c645ab9b3585f389c326f96 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 359 43.101 T 06-07-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM402_RS02480 4c8394e41c645ab9b3585f389c326f96 364 Gene3D G3DSA:1.20.1090.10 173 357 4.4E-67 T 06-07-2017 AM402_RS02480 4c8394e41c645ab9b3585f389c326f96 364 Pfam PF01761 3-dehydroquinate synthase 67 326 7.4E-110 T 06-07-2017 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM402_RS02480 4c8394e41c645ab9b3585f389c326f96 364 SUPERFAMILY SSF56796 4 357 1.06E-115 T 06-07-2017 AM402_RS02480 4c8394e41c645ab9b3585f389c326f96 364 PIRSF PIRSF001455 8 363 2.0E-109 T 06-07-2017 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM402_RS02480 4c8394e41c645ab9b3585f389c326f96 364 Gene3D G3DSA:3.40.50.1970 2 172 3.7E-68 T 06-07-2017 AM402_RS02480 4c8394e41c645ab9b3585f389c326f96 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 356 4.7E-121 T 06-07-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 Pfam PF00005 ABC transporter 22 162 2.4E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 Pfam PF08402 TOBE domain 273 343 2.6E-9 T 06-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 SMART SM00382 29 212 1.4E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 Gene3D G3DSA:3.40.50.300 3 235 1.6E-75 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 Gene3D G3DSA:2.40.50.100 337 351 6.5E-6 T 06-07-2017 AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 Gene3D G3DSA:2.40.50.100 253 277 6.5E-6 T 06-07-2017 AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 SUPERFAMILY SSF50331 237 351 3.4E-23 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 Gene3D G3DSA:2.40.50.140 278 335 3.5E-12 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS19940 a2b92230ce354387c5c951c9e7e28d3e 364 SUPERFAMILY SSF52540 4 244 5.32E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 Gene3D G3DSA:1.10.10.10 3 54 4.7E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 5.5E-20 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 SUPERFAMILY SSF54909 62 151 5.09E-20 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 7.9E-12 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 7.9E-12 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 7.9E-12 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 SMART SM00344 2 111 5.7E-42 T 06-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 Gene3D G3DSA:3.30.70.920 55 139 2.1E-29 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.3E-17 T 06-07-2017 AM402_RS18830 0714d2d8fcd440ddd07175117b4e2ab9 153 SUPERFAMILY SSF46785 2 92 2.74E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14740 480ec5480aa5a38149df7c6d46baecb7 156 SUPERFAMILY SSF53955 6 155 6.65E-55 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS14740 480ec5480aa5a38149df7c6d46baecb7 156 Pfam PF00959 Phage lysozyme 41 146 1.1E-22 T 06-07-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM402_RS14740 480ec5480aa5a38149df7c6d46baecb7 156 Gene3D G3DSA:1.10.530.40 19 155 1.9E-55 T 06-07-2017 IPR023347 Lysozyme domain GO:0003796 AM402_RS07510 b3f2b50fe55a4bf52f0a470aea202a89 561 PIRSF PIRSF029745 1 561 8.5E-120 T 06-07-2017 IPR027282 Two partner secretion pathway transporter GO:0015031 AM402_RS07510 b3f2b50fe55a4bf52f0a470aea202a89 561 Pfam PF08479 POTRA domain, ShlB-type 77 150 5.7E-20 T 06-07-2017 IPR013686 Polypeptide-transport-associated, ShlB-type AM402_RS07510 b3f2b50fe55a4bf52f0a470aea202a89 561 Gene3D G3DSA:3.10.20.310 72 150 7.7E-15 T 06-07-2017 AM402_RS07510 b3f2b50fe55a4bf52f0a470aea202a89 561 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 158 561 4.0E-288 T 06-07-2017 IPR005565 Haemolysin activator HlyB AM402_RS07510 b3f2b50fe55a4bf52f0a470aea202a89 561 Gene3D G3DSA:2.40.160.50 180 560 1.7E-90 T 06-07-2017 AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 21 284 7.0E-75 T 06-07-2017 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 Gene3D G3DSA:3.40.50.300 723 805 2.3E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 Gene3D G3DSA:3.40.50.300 472 488 2.3E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 Gene3D G3DSA:3.40.50.300 562 563 2.3E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 Gene3D G3DSA:3.40.50.300 637 682 2.3E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 9 891 0.0 T 06-07-2017 IPR022303 Conjugative transfer ATPase AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 Gene3D G3DSA:3.40.50.300 489 542 4.5E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 SUPERFAMILY SSF52540 587 818 2.56E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17800 0e628dd908ae579c3846e80990e08764 898 SUPERFAMILY SSF52540 427 550 2.56E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12610 d03de28197055b385a7a3a0e4ecf67d4 153 SUPERFAMILY SSF53927 2 120 3.35E-39 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AM402_RS12610 d03de28197055b385a7a3a0e4ecf67d4 153 Gene3D G3DSA:3.40.140.10 2 134 2.4E-41 T 06-07-2017 AM402_RS12610 d03de28197055b385a7a3a0e4ecf67d4 153 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 06-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM402_RS12610 d03de28197055b385a7a3a0e4ecf67d4 153 Pfam PF14437 MafB19-like deaminase 2 112 2.7E-23 T 06-07-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM402_RS19170 96f8e5b17d45d7bddf697f2325d803ca 138 Gene3D G3DSA:3.30.70.1290 2 137 2.8E-48 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS19170 96f8e5b17d45d7bddf697f2325d803ca 138 Pfam PF01797 Transposase IS200 like 15 134 8.9E-40 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS19170 96f8e5b17d45d7bddf697f2325d803ca 138 SUPERFAMILY SSF143422 6 135 4.45E-46 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS19170 96f8e5b17d45d7bddf697f2325d803ca 138 SMART SM01321 14 134 1.6E-41 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS11975 9b1d57454cea7c73c9ffece55966d9c5 269 SUPERFAMILY SSF51366 1 266 1.88E-86 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM402_RS11975 9b1d57454cea7c73c9ffece55966d9c5 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 7.5E-94 T 06-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM402_RS11975 9b1d57454cea7c73c9ffece55966d9c5 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 5.5E-102 T 06-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM402_RS11975 9b1d57454cea7c73c9ffece55966d9c5 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 06-07-2017 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM402_RS11975 9b1d57454cea7c73c9ffece55966d9c5 269 Gene3D G3DSA:3.20.20.70 1 266 3.6E-94 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS11975 9b1d57454cea7c73c9ffece55966d9c5 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.267 T 06-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 Pfam PF00625 Guanylate kinase 5 185 2.9E-65 T 06-07-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.402 T 06-07-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 Gene3D G3DSA:3.40.50.300 88 204 8.3E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 Gene3D G3DSA:3.40.50.300 3 17 8.3E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 06-07-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 Gene3D G3DSA:3.40.50.300 18 40 6.7E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.1E-75 T 06-07-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 SMART SM00072 3 187 4.6E-77 T 06-07-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 Gene3D G3DSA:3.30.63.10 41 87 2.6E-28 T 06-07-2017 AM402_RS03300 f297211d503b42906d259f0bfcef27d0 207 SUPERFAMILY SSF52540 3 189 1.73E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 06-07-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 43.79 T 06-07-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 SUPERFAMILY SSF51658 1 278 4.19E-103 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 06-07-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 5.3E-43 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 06-07-2017 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 8.7E-112 T 06-07-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 SMART SM00518 3 279 6.5E-136 T 06-07-2017 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AM402_RS14510 690f322654203d60a00d7f93f6949bf9 281 Gene3D G3DSA:3.20.20.150 1 278 2.5E-122 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS19410 e52dabbcd91cdf2dc663bc716721ccb8 238 SUPERFAMILY SSF46894 137 234 4.25E-21 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS19410 e52dabbcd91cdf2dc663bc716721ccb8 238 SMART SM00448 4 114 2.3E-37 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS19410 e52dabbcd91cdf2dc663bc716721ccb8 238 SUPERFAMILY SSF52172 2 129 1.57E-35 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS19410 e52dabbcd91cdf2dc663bc716721ccb8 238 Pfam PF00072 Response regulator receiver domain 6 113 9.5E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS19410 e52dabbcd91cdf2dc663bc716721ccb8 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 3.6E-18 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS19410 e52dabbcd91cdf2dc663bc716721ccb8 238 SMART SM00862 156 232 6.1E-15 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS19410 e52dabbcd91cdf2dc663bc716721ccb8 238 Gene3D G3DSA:1.10.10.10 136 233 9.1E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19410 e52dabbcd91cdf2dc663bc716721ccb8 238 Gene3D G3DSA:3.40.50.2300 2 125 7.7E-35 T 06-07-2017 AM402_RS18625 afff8da2a3436162c91f135279933c2b 256 PIRSF PIRSF006648 10 253 2.7E-25 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM402_RS18625 afff8da2a3436162c91f135279933c2b 256 Pfam PF01061 ABC-2 type transporter 9 218 1.2E-37 T 06-07-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM402_RS18625 afff8da2a3436162c91f135279933c2b 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.1E-6 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM402_RS18625 afff8da2a3436162c91f135279933c2b 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.1E-6 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM402_RS18625 afff8da2a3436162c91f135279933c2b 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.1E-6 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM402_RS18625 afff8da2a3436162c91f135279933c2b 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 1.1E-6 T 06-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM402_RS01675 8691351209cf46c24bbe8a4f4e46b035 430 SUPERFAMILY SSF51261 231 428 3.01E-47 T 06-07-2017 IPR011055 Duplicated hybrid motif AM402_RS01675 8691351209cf46c24bbe8a4f4e46b035 430 Gene3D G3DSA:2.70.70.10 288 429 1.7E-36 T 06-07-2017 AM402_RS01675 8691351209cf46c24bbe8a4f4e46b035 430 Pfam PF01551 Peptidase family M23 331 424 2.1E-26 T 06-07-2017 IPR016047 Peptidase M23 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PIRSF PIRSF000350 1 447 3.7E-87 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 SUPERFAMILY SSF55424 336 450 2.23E-35 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 Gene3D G3DSA:3.50.50.60 139 326 2.2E-53 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.9E-30 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.9E-30 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.9E-30 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.9E-30 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.9E-30 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 06-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 2.7E-217 T 06-07-2017 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 Gene3D G3DSA:3.30.390.30 338 450 2.3E-44 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 SUPERFAMILY SSF51905 1 359 4.92E-56 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 3.4E-69 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 5.6E-67 T 06-07-2017 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 Gene3D G3DSA:3.50.50.60 2 138 1.4E-45 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS03440 30ff5d0cd6e2ee820549db342b97e18b 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.5E-34 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 4.1E-252 T 06-07-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.483 T 06-07-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 Gene3D G3DSA:3.90.190.20 313 449 8.6E-36 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 385 1.9E-9 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 SUPERFAMILY SSF51984 1 90 1.7E-23 T 06-07-2017 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 Pfam PF08245 Mur ligase middle domain 108 291 2.1E-18 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 Gene3D G3DSA:3.40.50.720 1 90 9.0E-41 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 SUPERFAMILY SSF53623 95 308 1.44E-45 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 SUPERFAMILY SSF53244 312 448 7.2E-36 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 Gene3D G3DSA:3.40.1190.10 92 312 8.1E-81 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS00240 fa0922afc84c8f692e3bd0640119dc4d 459 Pfam PF01225 Mur ligase family, catalytic domain 2 98 5.1E-19 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 Gene3D G3DSA:1.20.59.10 2 83 8.8E-24 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 Gene3D G3DSA:1.10.3660.10 249 373 4.8E-52 T 06-07-2017 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 SUPERFAMILY SSF48179 242 367 1.81E-40 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 SMART SM00830 9 89 6.1E-29 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 SUPERFAMILY SSF51735 91 239 6.69E-37 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 Gene3D G3DSA:3.40.50.720 84 248 8.4E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 SUPERFAMILY SSF48600 3 88 2.2E-24 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 Pfam PF01817 Chorismate mutase type II 9 86 3.3E-21 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 9.2E-44 T 06-07-2017 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 PIRSF PIRSF001499 1 374 2.4E-168 T 06-07-2017 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AM402_RS17055 6c9daf2f5bca973a80ae877346e055d7 374 Pfam PF02153 Prephenate dehydrogenase 142 342 1.4E-29 T 06-07-2017 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 SMART SM00363 96 160 4.7E-21 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.2E-30 T 06-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 Gene3D G3DSA:3.10.290.10 102 190 2.3E-34 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 06-07-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.551 T 06-07-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.7E-87 T 06-07-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 SUPERFAMILY SSF55174 3 206 5.36E-74 T 06-07-2017 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 Gene3D G3DSA:1.10.1050.10 1 101 3.1E-41 T 06-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 Pfam PF01479 S4 domain 97 143 1.1E-18 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS00885 d5c33a1a37fd7ad464b78c70310a8f75 206 SMART SM01390 3 95 9.9E-49 T 06-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM402_RS19530 2f50d88ef9975bf6a72f6d629cf682c7 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 2.1E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS19530 2f50d88ef9975bf6a72f6d629cf682c7 300 SUPERFAMILY SSF53850 93 288 6.01E-24 T 06-07-2017 AM402_RS19530 2f50d88ef9975bf6a72f6d629cf682c7 300 Gene3D G3DSA:1.10.10.10 7 92 5.2E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19530 2f50d88ef9975bf6a72f6d629cf682c7 300 Pfam PF03466 LysR substrate binding domain 94 280 4.7E-20 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS19530 2f50d88ef9975bf6a72f6d629cf682c7 300 Gene3D G3DSA:3.40.190.10 95 177 8.8E-11 T 06-07-2017 AM402_RS19530 2f50d88ef9975bf6a72f6d629cf682c7 300 SUPERFAMILY SSF46785 8 91 3.48E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19530 2f50d88ef9975bf6a72f6d629cf682c7 300 Gene3D G3DSA:3.40.190.10 178 265 2.1E-8 T 06-07-2017 AM402_RS20875 050f80690b910cc37d45691b4621792e 421 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 107 231 1.3E-24 T 06-07-2017 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AM402_RS02850 06f2c21df3f0fd83dd0f190218bdcb54 320 Pfam PF01032 FecCD transport family 12 313 1.6E-63 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM402_RS02850 06f2c21df3f0fd83dd0f190218bdcb54 320 Gene3D G3DSA:1.10.3470.10 5 315 6.2E-67 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS02850 06f2c21df3f0fd83dd0f190218bdcb54 320 SUPERFAMILY SSF81345 4 313 2.48E-64 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS21915 f134feaab1115e472c5a755ffcf1f517 121 SUPERFAMILY SSF46955 4 108 4.03E-16 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS21915 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 5.7E-15 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21915 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 5.7E-15 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21915 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 5.7E-15 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21915 f134feaab1115e472c5a755ffcf1f517 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 2.0E-61 T 06-07-2017 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 AM402_RS21915 f134feaab1115e472c5a755ffcf1f517 121 SMART SM00422 4 73 4.5E-21 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21915 f134feaab1115e472c5a755ffcf1f517 121 Gene3D G3DSA:1.10.1660.10 4 109 1.9E-17 T 06-07-2017 AM402_RS21915 f134feaab1115e472c5a755ffcf1f517 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.2E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 46.63 T 06-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 SUPERFAMILY SSF51735 2 150 5.84E-46 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 Pfam PF13288 DXP reductoisomerase C-terminal domain 272 386 4.5E-41 T 06-07-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 Gene3D G3DSA:1.10.1740.10 313 395 1.1E-30 T 06-07-2017 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 PIRSF PIRSF006205 1 397 2.2E-156 T 06-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.7E-34 T 06-07-2017 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 Gene3D G3DSA:3.40.50.720 1 150 1.7E-57 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 394 3.3E-174 T 06-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 SUPERFAMILY SSF69055 302 395 2.62E-31 T 06-07-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 SUPERFAMILY SSF55347 126 274 1.9E-59 T 06-07-2017 AM402_RS06265 af04cb394a3ceb537c728f35bc889eca 397 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 5.8E-49 T 06-07-2017 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM402_RS07060 9d017fe966ff403a1513ae8825a2d20c 471 SUPERFAMILY SSF51905 415 471 3.02E-48 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07060 9d017fe966ff403a1513ae8825a2d20c 471 SUPERFAMILY SSF51905 56 273 3.02E-48 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07060 9d017fe966ff403a1513ae8825a2d20c 471 Pfam PF01266 FAD dependent oxidoreductase 56 453 8.4E-51 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM402_RS07060 9d017fe966ff403a1513ae8825a2d20c 471 Gene3D G3DSA:3.50.50.60 51 125 3.7E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07060 9d017fe966ff403a1513ae8825a2d20c 471 Gene3D G3DSA:3.50.50.60 415 471 3.7E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07060 9d017fe966ff403a1513ae8825a2d20c 471 Gene3D G3DSA:3.50.50.60 197 272 3.7E-50 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07060 9d017fe966ff403a1513ae8825a2d20c 471 Gene3D G3DSA:3.30.9.10 316 412 4.1E-4 T 06-07-2017 AM402_RS07060 9d017fe966ff403a1513ae8825a2d20c 471 Gene3D G3DSA:3.30.9.10 126 196 4.1E-4 T 06-07-2017 AM402_RS04235 f6e88dcb18368c577c19b739e2147d4b 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 112 276 1.7E-35 T 06-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM402_RS04235 f6e88dcb18368c577c19b739e2147d4b 282 TIGRFAM TIGR01334 modD: modD protein 2 278 5.9E-120 T 06-07-2017 IPR006242 Putative pyrophosphorylase ModD GO:0016763 AM402_RS04235 f6e88dcb18368c577c19b739e2147d4b 282 SUPERFAMILY SSF51690 121 277 1.33E-38 T 06-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM402_RS04235 f6e88dcb18368c577c19b739e2147d4b 282 SUPERFAMILY SSF54675 2 105 1.06E-22 T 06-07-2017 AM402_RS04235 f6e88dcb18368c577c19b739e2147d4b 282 Gene3D G3DSA:3.90.1170.20 6 128 5.5E-28 T 06-07-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM402_RS04235 f6e88dcb18368c577c19b739e2147d4b 282 PIRSF PIRSF006250 1 281 3.5E-74 T 06-07-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AM402_RS04235 f6e88dcb18368c577c19b739e2147d4b 282 Gene3D G3DSA:3.20.20.70 129 267 1.9E-37 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS04235 f6e88dcb18368c577c19b739e2147d4b 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 17 103 2.8E-19 T 06-07-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM402_RS04605 268f0659fd1f2209a5bb13c0f3cb4d36 693 Gene3D G3DSA:2.170.130.10 31 160 7.8E-25 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS04605 268f0659fd1f2209a5bb13c0f3cb4d36 693 Gene3D G3DSA:2.40.170.20 168 270 1.0E-60 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS04605 268f0659fd1f2209a5bb13c0f3cb4d36 693 Gene3D G3DSA:2.40.170.20 306 693 1.0E-60 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS04605 268f0659fd1f2209a5bb13c0f3cb4d36 693 SUPERFAMILY SSF56935 308 693 6.59E-85 T 06-07-2017 AM402_RS04605 268f0659fd1f2209a5bb13c0f3cb4d36 693 SUPERFAMILY SSF56935 38 272 6.59E-85 T 06-07-2017 AM402_RS04605 268f0659fd1f2209a5bb13c0f3cb4d36 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 154 1.7E-17 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS04605 268f0659fd1f2209a5bb13c0f3cb4d36 693 Pfam PF00593 TonB dependent receptor 448 691 1.0E-21 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS18935 86f30899c85e7324aa5db5eb7bd43fc3 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 29.85 T 06-07-2017 IPR007551 Protein of unknown function DUF520 AM402_RS18935 86f30899c85e7324aa5db5eb7bd43fc3 163 SUPERFAMILY SSF89963 91 163 1.8E-30 T 06-07-2017 IPR007551 Protein of unknown function DUF520 AM402_RS18935 86f30899c85e7324aa5db5eb7bd43fc3 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 4.4E-67 T 06-07-2017 IPR007551 Protein of unknown function DUF520 AM402_RS18935 86f30899c85e7324aa5db5eb7bd43fc3 163 Gene3D G3DSA:3.30.70.860 98 163 1.8E-36 T 06-07-2017 AM402_RS18935 86f30899c85e7324aa5db5eb7bd43fc3 163 Gene3D G3DSA:3.30.70.990 9 97 1.0E-34 T 06-07-2017 AM402_RS18935 86f30899c85e7324aa5db5eb7bd43fc3 163 SUPERFAMILY SSF89963 2 89 4.97E-30 T 06-07-2017 IPR007551 Protein of unknown function DUF520 AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 Pfam PF13411 MerR HTH family regulatory protein 4 70 3.6E-17 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 SUPERFAMILY SSF46955 3 112 2.2E-27 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.7E-7 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.7E-7 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.7E-7 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 Gene3D G3DSA:1.10.1660.10 2 58 8.3E-25 T 06-07-2017 AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 SUPERFAMILY SSF89082 152 212 8.76E-5 T 06-07-2017 IPR012925 TipAS antibiotic-recognition domain AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 SMART SM00422 3 72 3.0E-26 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 Pfam PF07739 TipAS antibiotic-recognition domain 259 319 3.0E-6 T 06-07-2017 IPR012925 TipAS antibiotic-recognition domain AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 Pfam PF07739 TipAS antibiotic-recognition domain 151 216 9.8E-7 T 06-07-2017 IPR012925 TipAS antibiotic-recognition domain AM402_RS19645 e9168046c63ebba170bbcb578a54a097 341 Gene3D G3DSA:1.10.1660.10 59 110 1.2E-7 T 06-07-2017 AM402_RS12455 4f9cb8198a9e2d45cf80795ec0b4d419 295 Pfam PF03466 LysR substrate binding domain 88 294 3.2E-32 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS12455 4f9cb8198a9e2d45cf80795ec0b4d419 295 SUPERFAMILY SSF53850 88 295 3.44E-33 T 06-07-2017 AM402_RS12455 4f9cb8198a9e2d45cf80795ec0b4d419 295 Gene3D G3DSA:3.40.190.10 179 258 3.7E-11 T 06-07-2017 AM402_RS12455 4f9cb8198a9e2d45cf80795ec0b4d419 295 Gene3D G3DSA:3.40.190.10 92 178 3.3E-15 T 06-07-2017 AM402_RS12455 4f9cb8198a9e2d45cf80795ec0b4d419 295 Gene3D G3DSA:1.10.10.10 2 84 5.9E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12455 4f9cb8198a9e2d45cf80795ec0b4d419 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.7E-19 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS12455 4f9cb8198a9e2d45cf80795ec0b4d419 295 SUPERFAMILY SSF46785 3 86 9.35E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16380 3ede25ae5553f0bd1dc37e9fea87ef69 109 Pfam PF05939 Phage minor tail protein 2 108 1.6E-33 T 06-07-2017 IPR010265 Bacteriophage lambda, GpM, minor tail AM402_RS11675 3ede25ae5553f0bd1dc37e9fea87ef69 109 Pfam PF05939 Phage minor tail protein 2 108 1.6E-33 T 06-07-2017 IPR010265 Bacteriophage lambda, GpM, minor tail AM402_RS07550 4a07abd6f2162738db7b281f0de3d76b 180 Gene3D G3DSA:3.40.80.10 3 178 9.2E-70 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AM402_RS07550 4a07abd6f2162738db7b281f0de3d76b 180 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 54 167 1.6E-20 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AM402_RS07550 4a07abd6f2162738db7b281f0de3d76b 180 SUPERFAMILY SSF55846 3 178 2.22E-66 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AM402_RS07550 4a07abd6f2162738db7b281f0de3d76b 180 SMART SM00644 16 166 1.7E-53 T 06-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AM402_RS06125 66e9933cf276d9a65942b1ed2110e994 420 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 191 405 2.8E-49 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM402_RS06125 66e9933cf276d9a65942b1ed2110e994 420 SMART SM00646 251 405 4.8E-64 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM402_RS06125 66e9933cf276d9a65942b1ed2110e994 420 Pfam PF11741 AMIN domain 39 142 1.8E-26 T 06-07-2017 IPR021731 AMIN domain AM402_RS06125 66e9933cf276d9a65942b1ed2110e994 420 Gene3D G3DSA:3.40.630.40 333 408 1.2E-59 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM402_RS06125 66e9933cf276d9a65942b1ed2110e994 420 Gene3D G3DSA:3.40.630.40 189 286 1.2E-59 T 06-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM402_RS06125 66e9933cf276d9a65942b1ed2110e994 420 SUPERFAMILY SSF53187 332 408 2.57E-52 T 06-07-2017 AM402_RS06125 66e9933cf276d9a65942b1ed2110e994 420 SUPERFAMILY SSF53187 189 285 2.57E-52 T 06-07-2017 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 Gene3D G3DSA:3.40.190.10 126 210 2.7E-12 T 06-07-2017 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 583 5.8E-13 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 Pfam PF00512 His Kinase A (phospho-acceptor) domain 364 424 4.8E-8 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 SMART SM00388 363 432 4.0E-4 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 SUPERFAMILY SSF53850 74 278 5.44E-16 T 06-07-2017 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 Gene3D G3DSA:3.30.565.10 441 583 9.1E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 SUPERFAMILY SSF55874 438 584 3.14E-25 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 9.1E-5 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 9.1E-5 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 9.1E-5 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 Gene3D G3DSA:1.10.287.130 357 423 7.7E-5 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 269 1.5E-33 T 06-07-2017 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 SUPERFAMILY SSF47384 355 426 6.28E-9 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS09520 9a284ce1f728527e2527a3359959d771 587 SMART SM00387 478 586 1.3E-16 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 Gene3D G3DSA:1.10.274.10 26 132 1.0E-37 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 SUPERFAMILY SSF51621 249 549 1.36E-111 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 4.3E-250 T 06-07-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 SUPERFAMILY SSF52009 125 246 1.44E-35 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 06-07-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 Gene3D G3DSA:3.50.30.10 133 254 3.9E-41 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 PIRSF PIRSF000732 1 574 5.8E-223 T 06-07-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 Gene3D G3DSA:3.20.20.60 255 571 5.0E-117 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.5E-125 T 06-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 06-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 6.8E-31 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 4.3E-23 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 SUPERFAMILY SSF47831 26 141 2.35E-33 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.5E-31 T 06-07-2017 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.5E-31 T 06-07-2017 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.5E-31 T 06-07-2017 AM402_RS08720 c0740038d0b66baec762700ba9aa3aad 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.5E-31 T 06-07-2017 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 SUPERFAMILY SSF55785 87 195 1.74E-9 T 06-07-2017 IPR000014 PAS domain AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 3.6E-28 T 06-07-2017 IPR021766 Protein of unknown function DUF3329 GO:0004673 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 6.9E-133 T 06-07-2017 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 8.3E-21 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 Gene3D G3DSA:3.30.450.20 99 195 1.2E-7 T 06-07-2017 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 SUPERFAMILY SSF47384 191 268 6.47E-20 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 SMART SM00091 98 165 5.7E-6 T 06-07-2017 IPR000014 PAS domain AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 Gene3D G3DSA:3.30.565.10 255 422 2.0E-42 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 SMART SM00388 203 269 1.7E-23 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 Pfam PF00989 PAS fold 99 161 2.1E-7 T 06-07-2017 IPR013767 PAS fold GO:0006355 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 Gene3D G3DSA:1.10.287.130 196 254 3.7E-22 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 SUPERFAMILY SSF55874 259 423 1.57E-40 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 5.5E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 5.5E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 5.5E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 5.5E-15 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 424 5.0E-22 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS19140 4eff3a39055ca7e9e9fd93d47208188f 430 SMART SM00387 313 425 1.7E-35 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS11170 9e1e43a8451796dda3301584f363032f 264 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS11170 9e1e43a8451796dda3301584f363032f 264 Pfam PF00005 ABC transporter 25 174 8.0E-25 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS11170 9e1e43a8451796dda3301584f363032f 264 SUPERFAMILY SSF52540 14 232 5.21E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11170 9e1e43a8451796dda3301584f363032f 264 Gene3D G3DSA:3.40.50.300 13 250 4.4E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11170 9e1e43a8451796dda3301584f363032f 264 SMART SM00382 34 223 1.6E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 Pfam PF00710 Asparaginase, N-terminal 23 212 5.7E-58 T 06-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 SMART SM00870 23 339 8.5E-131 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 Gene3D G3DSA:3.40.50.40 232 343 2.5E-38 T 06-07-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 PIRSF PIRSF001220 19 345 2.1E-87 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 26 34 - T 06-07-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 Gene3D G3DSA:3.40.50.1170 21 226 5.6E-69 T 06-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 102 112 - T 06-07-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 PIRSF PIRSF500176 20 345 8.6E-78 T 06-07-2017 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 9 345 2.8E-143 T 06-07-2017 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 SUPERFAMILY SSF53774 21 344 5.1E-101 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 PRINTS PR00139 Asparaginase/glutaminase family signature 101 119 3.0E-22 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 PRINTS PR00139 Asparaginase/glutaminase family signature 24 35 3.0E-22 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS15450 fa860f356a54661186e2a2ac490fc0cb 345 PRINTS PR00139 Asparaginase/glutaminase family signature 279 297 3.0E-22 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS03500 e2421942d220393b233b8bfc4ebae8e9 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 1.5E-11 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM402_RS03500 e2421942d220393b233b8bfc4ebae8e9 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 1.5E-11 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM402_RS03500 e2421942d220393b233b8bfc4ebae8e9 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 1.5E-11 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM402_RS03500 e2421942d220393b233b8bfc4ebae8e9 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 06-07-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM402_RS03500 e2421942d220393b233b8bfc4ebae8e9 190 SUPERFAMILY SSF50891 26 188 1.61E-57 T 06-07-2017 IPR029000 Cyclophilin-like domain AM402_RS03500 e2421942d220393b233b8bfc4ebae8e9 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 29 186 2.3E-50 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM402_RS03500 e2421942d220393b233b8bfc4ebae8e9 190 Gene3D G3DSA:2.40.100.10 27 188 4.1E-54 T 06-07-2017 IPR029000 Cyclophilin-like domain AM402_RS16195 fc998ebc648be7624a162e29db560212 125 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 06-07-2017 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16195 fc998ebc648be7624a162e29db560212 125 PIRSF PIRSF000178 1 125 8.4E-30 T 06-07-2017 AM402_RS16195 fc998ebc648be7624a162e29db560212 125 Gene3D G3DSA:1.20.1300.10 2 125 5.7E-40 T 06-07-2017 AM402_RS16195 fc998ebc648be7624a162e29db560212 125 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 06-07-2017 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16195 fc998ebc648be7624a162e29db560212 125 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 119 3.2E-31 T 06-07-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16195 fc998ebc648be7624a162e29db560212 125 SUPERFAMILY SSF81343 2 125 1.59E-32 T 06-07-2017 AM402_RS16195 fc998ebc648be7624a162e29db560212 125 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 122 2.6E-38 T 06-07-2017 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS00645 f6ea9e7f0a15938b8dd4bb542bb3c4dd 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 1.9E-211 T 06-07-2017 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 AM402_RS00645 f6ea9e7f0a15938b8dd4bb542bb3c4dd 376 Gene3D G3DSA:3.90.1150.10 251 375 2.4E-25 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS00645 f6ea9e7f0a15938b8dd4bb542bb3c4dd 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 372 8.4E-90 T 06-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM402_RS00645 f6ea9e7f0a15938b8dd4bb542bb3c4dd 376 SUPERFAMILY SSF53383 2 375 3.4E-104 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS00645 f6ea9e7f0a15938b8dd4bb542bb3c4dd 376 PIRSF PIRSF000390 1 376 1.2E-115 T 06-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM402_RS00645 f6ea9e7f0a15938b8dd4bb542bb3c4dd 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.222 T 06-07-2017 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 AM402_RS00645 f6ea9e7f0a15938b8dd4bb542bb3c4dd 376 Gene3D G3DSA:3.40.640.10 1 249 1.2E-79 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 SUPERFAMILY SSF63380 11 105 7.27E-21 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 Pfam PF00175 Oxidoreductase NAD-binding domain 116 219 3.0E-13 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 261 328 1.0E-13 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 Gene3D G3DSA:2.40.30.10 11 105 3.4E-18 T 06-07-2017 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 SUPERFAMILY SSF52343 104 242 1.96E-29 T 06-07-2017 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 PRINTS PR00406 Cytochrome B5 reductase signature 206 214 3.3E-5 T 06-07-2017 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 PRINTS PR00406 Cytochrome B5 reductase signature 55 62 3.3E-5 T 06-07-2017 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 PRINTS PR00406 Cytochrome B5 reductase signature 115 134 3.3E-5 T 06-07-2017 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 Gene3D G3DSA:3.10.20.30 236 333 8.2E-25 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 Gene3D G3DSA:3.40.50.80 106 235 6.2E-30 T 06-07-2017 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 285 293 - T 06-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 Pfam PF00970 Oxidoreductase FAD-binding domain 34 104 8.9E-8 T 06-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM402_RS07255 d8b2d0ca37d59c3464a509ca713fbd42 334 SUPERFAMILY SSF54292 231 333 1.3E-24 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 06-07-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 Gene3D G3DSA:3.30.1490.20 157 222 5.2E-24 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 Gene3D G3DSA:3.30.470.20 224 360 5.7E-52 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 SUPERFAMILY SSF56059 140 356 9.9E-61 T 06-07-2017 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 06-07-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 41.876 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 7.2E-112 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 Gene3D G3DSA:3.40.50.20 1 129 4.2E-37 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 PIRSF PIRSF039102 1 358 1.0E-128 T 06-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 Pfam PF01820 D-ala D-ala ligase N-terminus 5 129 8.4E-32 T 06-07-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 1.5E-78 T 06-07-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS12505 9020b816603db35c2f7aa0c24790ccf9 366 SUPERFAMILY SSF52440 3 139 9.59E-36 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 3.9E-31 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.893 T 06-07-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 SUPERFAMILY SSF47729 3 93 1.77E-31 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 Gene3D G3DSA:4.10.520.10 2 93 1.7E-36 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 SMART SM00411 3 92 3.4E-42 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.9E-52 T 06-07-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS13365 cdb4a535efcbe168f8e01a85900b7e23 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 Gene3D G3DSA:3.30.70.260 292 376 7.6E-25 T 06-07-2017 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 Pfam PF00800 Prephenate dehydratase 105 286 9.4E-59 T 06-07-2017 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 3.9E-28 T 06-07-2017 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 Gene3D G3DSA:1.20.59.10 2 105 5.1E-41 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 Pfam PF01817 Chorismate mutase type II 10 88 2.1E-16 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 SUPERFAMILY SSF48600 5 92 4.58E-21 T 06-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 Gene3D G3DSA:3.40.190.10 192 272 1.4E-26 T 06-07-2017 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 06-07-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 SUPERFAMILY SSF53850 104 290 1.02E-54 T 06-07-2017 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 SUPERFAMILY SSF55021 279 376 2.06E-21 T 06-07-2017 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 Gene3D G3DSA:3.40.190.10 106 191 1.9E-30 T 06-07-2017 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 SMART SM00830 10 90 7.7E-25 T 06-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 06-07-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM402_RS17045 7c2b213a44822bffb6431ffbad4595b8 385 PIRSF PIRSF001500 1 379 2.0E-133 T 06-07-2017 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM402_RS01405 0101984e20ab9e497c28d37919a7304c 112 Gene3D G3DSA:3.10.450.40 8 111 2.0E-35 T 06-07-2017 AM402_RS01405 0101984e20ab9e497c28d37919a7304c 112 SUPERFAMILY SSF160719 11 111 4.58E-29 T 06-07-2017 AM402_RS01405 0101984e20ab9e497c28d37919a7304c 112 Pfam PF04965 Gene 25-like lysozyme 18 98 1.7E-16 T 06-07-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD AM402_RS07890 0101984e20ab9e497c28d37919a7304c 112 Gene3D G3DSA:3.10.450.40 8 111 2.0E-35 T 06-07-2017 AM402_RS07890 0101984e20ab9e497c28d37919a7304c 112 SUPERFAMILY SSF160719 11 111 4.58E-29 T 06-07-2017 AM402_RS07890 0101984e20ab9e497c28d37919a7304c 112 Pfam PF04965 Gene 25-like lysozyme 18 98 1.7E-16 T 06-07-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD AM402_RS19955 e6e0902fb2815a1565a0d6f9b01dedc1 395 SUPERFAMILY SSF103473 6 384 6.28E-70 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS19955 e6e0902fb2815a1565a0d6f9b01dedc1 395 Pfam PF07690 Major Facilitator Superfamily 12 261 2.2E-42 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS19955 e6e0902fb2815a1565a0d6f9b01dedc1 395 Gene3D G3DSA:1.20.1250.20 211 389 9.2E-19 T 06-07-2017 AM402_RS19955 e6e0902fb2815a1565a0d6f9b01dedc1 395 Gene3D G3DSA:1.20.1250.20 9 191 4.8E-39 T 06-07-2017 AM402_RS21395 82ab4066eb6d1c4f2837b561e9c51a57 100 Gene3D G3DSA:3.40.120.10 3 81 2.3E-23 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS21395 82ab4066eb6d1c4f2837b561e9c51a57 100 SUPERFAMILY SSF53738 2 81 7.85E-22 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS21395 82ab4066eb6d1c4f2837b561e9c51a57 100 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 81 9.5E-23 T 06-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS05345 777fb159db33c4287d480afd8c8cb324 208 Pfam PF05309 TraE protein 2 177 8.4E-31 T 06-07-2017 IPR007973 Pilus assembly TraE GO:0000746 AM402_RS13880 3ad1570843b671ba3dbd13107037ff8e 111 SUPERFAMILY SSF69118 4 108 6.28E-28 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM402_RS13880 3ad1570843b671ba3dbd13107037ff8e 111 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 105 2.6E-19 T 06-07-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM402_RS13880 3ad1570843b671ba3dbd13107037ff8e 111 Gene3D G3DSA:1.20.1290.10 3 110 9.4E-37 T 06-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM402_RS13880 3ad1570843b671ba3dbd13107037ff8e 111 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 88 2.4E-17 T 06-07-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM402_RS21950 f0298c275bb41495143bdc08389b0d60 289 Gene3D G3DSA:3.30.420.10 99 272 2.8E-39 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21950 f0298c275bb41495143bdc08389b0d60 289 Pfam PF00929 Exonuclease 107 264 7.8E-16 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS21950 f0298c275bb41495143bdc08389b0d60 289 SUPERFAMILY SSF53098 96 275 1.68E-32 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21950 f0298c275bb41495143bdc08389b0d60 289 SMART SM00479 105 274 2.4E-28 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS04775 0f66344e0c8c194aaf73abe0cd378abb 214 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 1.7E-93 T 06-07-2017 IPR021548 Protein of unknown function DUF2895 AM402_RS04775 0f66344e0c8c194aaf73abe0cd378abb 214 Pfam PF11444 Protein of unknown function (DUF2895) 6 203 7.8E-91 T 06-07-2017 IPR021548 Protein of unknown function DUF2895 AM402_RS21660 be4b3b2f0ddbcfecbb2c4800e95c50a8 371 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 154 279 7.2E-9 T 06-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM402_RS21660 be4b3b2f0ddbcfecbb2c4800e95c50a8 371 SUPERFAMILY SSF52402 174 275 3.98E-18 T 06-07-2017 AM402_RS21660 be4b3b2f0ddbcfecbb2c4800e95c50a8 371 SUPERFAMILY SSF52402 50 139 3.98E-18 T 06-07-2017 AM402_RS21660 be4b3b2f0ddbcfecbb2c4800e95c50a8 371 Gene3D G3DSA:3.40.50.620 50 276 7.2E-21 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS07400 5f16ab58adfe19cb69e788ed8f8ef41e 152 SUPERFAMILY SSF89447 1 133 5.13E-44 T 06-07-2017 AM402_RS07400 5f16ab58adfe19cb69e788ed8f8ef41e 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 54.974 T 06-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM402_RS07400 5f16ab58adfe19cb69e788ed8f8ef41e 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 1.0E-67 T 06-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM402_RS07400 5f16ab58adfe19cb69e788ed8f8ef41e 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 151 3.9E-59 T 06-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM402_RS07400 5f16ab58adfe19cb69e788ed8f8ef41e 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 5.1E-22 T 06-07-2017 IPR020603 MraZ domain AM402_RS07400 5f16ab58adfe19cb69e788ed8f8ef41e 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 145 2.5E-20 T 06-07-2017 IPR020603 MraZ domain AM402_RS15355 6b0d89c79966560ddb3cf73906caf1c0 217 SMART SM01059 6 209 1.8E-113 T 06-07-2017 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM402_RS15355 6b0d89c79966560ddb3cf73906caf1c0 217 Pfam PF00302 Chloramphenicol acetyltransferase 7 209 1.3E-100 T 06-07-2017 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM402_RS15355 6b0d89c79966560ddb3cf73906caf1c0 217 Gene3D G3DSA:3.30.559.10 7 213 1.2E-88 T 06-07-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 AM402_RS15355 6b0d89c79966560ddb3cf73906caf1c0 217 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 190 200 - T 06-07-2017 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 AM402_RS15355 6b0d89c79966560ddb3cf73906caf1c0 217 PIRSF PIRSF000440 5 216 5.9E-85 T 06-07-2017 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM402_RS15355 6b0d89c79966560ddb3cf73906caf1c0 217 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 18 208 3.0E-109 T 06-07-2017 IPR001707 Chloramphenicol acetyltransferase GO:0008811 AM402_RS15355 6b0d89c79966560ddb3cf73906caf1c0 217 SUPERFAMILY SSF52777 7 214 4.13E-80 T 06-07-2017 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 SUPERFAMILY SSF56931 41 291 2.22E-93 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 Pfam PF02253 Phospholipase A1 44 287 8.0E-96 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 Gene3D G3DSA:2.40.230.10 40 290 1.1E-102 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 PRINTS PR01486 Bacterial phospholipase A1 protein signature 260 280 5.7E-78 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 188 5.7E-78 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 PRINTS PR01486 Bacterial phospholipase A1 protein signature 102 118 5.7E-78 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 PRINTS PR01486 Bacterial phospholipase A1 protein signature 205 223 5.7E-78 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 PRINTS PR01486 Bacterial phospholipase A1 protein signature 238 255 5.7E-78 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 PRINTS PR01486 Bacterial phospholipase A1 protein signature 80 97 5.7E-78 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 PRINTS PR01486 Bacterial phospholipase A1 protein signature 155 169 5.7E-78 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS00520 d2be86cadc3f3cb7da2fbcaca5b83787 291 PRINTS PR01486 Bacterial phospholipase A1 protein signature 125 144 5.7E-78 T 06-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AM402_RS10080 7bd1c725736898e6cb5e40c155d34683 488 SUPERFAMILY SSF103473 20 216 3.4E-28 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS10080 7bd1c725736898e6cb5e40c155d34683 488 SUPERFAMILY SSF103473 259 483 3.4E-28 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS10080 7bd1c725736898e6cb5e40c155d34683 488 Pfam PF00854 POT family 90 447 1.1E-89 T 06-07-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM402_RS10080 7bd1c725736898e6cb5e40c155d34683 488 Gene3D G3DSA:1.20.1250.20 22 201 8.2E-22 T 06-07-2017 AM402_RS10080 7bd1c725736898e6cb5e40c155d34683 488 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 18 486 8.5E-140 T 06-07-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM402_RS10080 7bd1c725736898e6cb5e40c155d34683 488 Gene3D G3DSA:1.20.1250.20 330 481 1.4E-7 T 06-07-2017 AM402_RS10080 7bd1c725736898e6cb5e40c155d34683 488 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 78 102 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM402_RS10080 7bd1c725736898e6cb5e40c155d34683 488 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM402_RS13565 e6ca974d05c99177162de51c5af43a5c 143 SUPERFAMILY SSF143100 3 64 1.92E-5 T 06-07-2017 AM402_RS13565 e6ca974d05c99177162de51c5af43a5c 143 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 3 83 1.8E-48 T 06-07-2017 IPR032753 HicB-like antitoxin AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 Gene3D G3DSA:3.30.70.1430 38 138 2.6E-29 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 SUPERFAMILY SSF82693 38 131 1.29E-24 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 Gene3D G3DSA:1.10.3850.10 814 1028 3.9E-53 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 SUPERFAMILY SSF82693 565 669 4.97E-29 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 SUPERFAMILY SSF82714 182 272 1.31E-18 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 SUPERFAMILY SSF82714 722 807 5.36E-20 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 SUPERFAMILY SSF82866 806 1029 6.28E-42 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 Gene3D G3DSA:1.20.1640.10 293 507 1.9E-53 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 SUPERFAMILY SSF82866 296 496 7.06E-45 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1036 0.0 T 06-07-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 Gene3D G3DSA:3.30.70.1430 567 670 2.4E-34 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 Gene3D G3DSA:3.30.2090.10 721 810 3.5E-23 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 Gene3D G3DSA:3.30.2090.10 182 273 1.6E-19 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 7.5E-106 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 SUPERFAMILY SSF82693 135 182 1.73E-20 T 06-07-2017 AM402_RS20015 4d761a0148c1ef4251766c11516428e7 1044 SUPERFAMILY SSF82693 274 330 1.73E-20 T 06-07-2017 AM402_RS21100 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 4 266 8.4E-77 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21100 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21100 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.5E-71 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21100 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21100 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21100 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 06-07-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM402_RS21390 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 4 266 8.4E-77 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21390 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21390 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.5E-71 T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21390 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 06-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21390 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 06-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM402_RS21390 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 06-07-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 SUPERFAMILY SSF47413 1 59 5.95E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 SUPERFAMILY SSF53822 60 331 3.93E-85 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 Gene3D G3DSA:1.10.260.40 2 57 4.8E-24 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.4E-18 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 Gene3D G3DSA:3.40.50.2300 58 166 6.4E-48 T 06-07-2017 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 Pfam PF13377 Periplasmic binding protein-like domain 168 329 4.0E-35 T 06-07-2017 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 Gene3D G3DSA:3.40.50.2300 167 329 4.8E-52 T 06-07-2017 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-7 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-7 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 SMART SM00354 1 71 2.2E-32 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS08120 32c73578ca013cf8f183dca8e155a40c 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 06-07-2017 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 Gene3D G3DSA:3.30.470.20 204 444 3.7E-100 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.2E-45 T 06-07-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.9E-39 T 06-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 Gene3D G3DSA:3.40.50.20 1 129 8.5E-52 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 SUPERFAMILY SSF52440 1 113 5.11E-47 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 SUPERFAMILY SSF51246 331 444 4.19E-44 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 SMART SM00878 336 441 1.7E-66 T 06-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.3E-248 T 06-07-2017 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.5E-85 T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 06-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 Gene3D G3DSA:3.30.1490.20 130 203 4.1E-30 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS19865 13bb3d156e714b6a765acc621c21f4d6 449 SUPERFAMILY SSF56059 83 346 1.38E-70 T 06-07-2017 AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 SMART SM00248 65 94 1.7E-4 T 06-07-2017 IPR002110 Ankyrin repeat GO:0005515 AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 SMART SM00248 131 160 0.51 T 06-07-2017 IPR002110 Ankyrin repeat GO:0005515 AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 SMART SM00248 202 228 780.0 T 06-07-2017 IPR002110 Ankyrin repeat GO:0005515 AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 SMART SM00248 98 127 4100.0 T 06-07-2017 IPR002110 Ankyrin repeat GO:0005515 AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 SMART SM00248 164 198 1.5 T 06-07-2017 IPR002110 Ankyrin repeat GO:0005515 AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 Pfam PF12796 Ankyrin repeats (3 copies) 110 200 2.9E-12 T 06-07-2017 IPR020683 Ankyrin repeat-containing domain AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 Gene3D G3DSA:1.25.40.20 37 228 5.8E-48 T 06-07-2017 IPR020683 Ankyrin repeat-containing domain AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 SUPERFAMILY SSF48403 37 227 6.97E-47 T 06-07-2017 IPR020683 Ankyrin repeat-containing domain AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 PRINTS PR01415 Ankyrin repeat signature 185 199 5.0E-5 T 06-07-2017 IPR002110 Ankyrin repeat GO:0005515 AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 PRINTS PR01415 Ankyrin repeat signature 132 147 5.0E-5 T 06-07-2017 IPR002110 Ankyrin repeat GO:0005515 AM402_RS12615 290f6a0477ecfaa9ba2ea007b3e2bad8 228 Pfam PF00023 Ankyrin repeat 67 96 9.8E-6 T 06-07-2017 IPR002110 Ankyrin repeat GO:0005515 AM402_RS13435 0b0d83f9158cbcf9418bfa8639b06f56 295 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS13435 0b0d83f9158cbcf9418bfa8639b06f56 295 Pfam PF00005 ABC transporter 28 173 6.5E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS13435 0b0d83f9158cbcf9418bfa8639b06f56 295 SMART SM00382 35 251 4.0E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS13435 0b0d83f9158cbcf9418bfa8639b06f56 295 SUPERFAMILY SSF52540 6 233 7.79E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13435 0b0d83f9158cbcf9418bfa8639b06f56 295 Gene3D G3DSA:3.40.50.300 4 241 4.1E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07235 bffd83f30f8ba3459a899be3a6014199 466 Pfam PF00654 Voltage gated chloride channel 88 434 1.2E-91 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM402_RS07235 bffd83f30f8ba3459a899be3a6014199 466 PRINTS PR00762 Chloride channel signature 349 369 9.5E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM402_RS07235 bffd83f30f8ba3459a899be3a6014199 466 PRINTS PR00762 Chloride channel signature 402 421 9.5E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM402_RS07235 bffd83f30f8ba3459a899be3a6014199 466 PRINTS PR00762 Chloride channel signature 99 116 9.5E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM402_RS07235 bffd83f30f8ba3459a899be3a6014199 466 PRINTS PR00762 Chloride channel signature 180 199 9.5E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM402_RS07235 bffd83f30f8ba3459a899be3a6014199 466 PRINTS PR00762 Chloride channel signature 384 400 9.5E-28 T 06-07-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AM402_RS07235 bffd83f30f8ba3459a899be3a6014199 466 SUPERFAMILY SSF81340 19 450 7.98E-109 T 06-07-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM402_RS07235 bffd83f30f8ba3459a899be3a6014199 466 Gene3D G3DSA:1.10.3080.10 22 448 1.4E-101 T 06-07-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 AM402_RS17405 186da98d5ec0d9ad3df5fb873d1aa888 349 Gene3D G3DSA:1.10.443.10 127 321 5.8E-26 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS17405 186da98d5ec0d9ad3df5fb873d1aa888 349 Pfam PF00589 Phage integrase family 167 316 5.4E-20 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS17405 186da98d5ec0d9ad3df5fb873d1aa888 349 Gene3D G3DSA:1.10.150.130 22 104 7.1E-6 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS17405 186da98d5ec0d9ad3df5fb873d1aa888 349 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 25 101 7.6E-8 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS17405 186da98d5ec0d9ad3df5fb873d1aa888 349 SUPERFAMILY SSF56349 17 319 1.88E-34 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS09100 6f1eb634c959b57375cc1a77e9e22945 404 Gene3D G3DSA:3.90.1150.10 280 403 2.7E-39 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS09100 6f1eb634c959b57375cc1a77e9e22945 404 SUPERFAMILY SSF53383 6 399 9.28E-94 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS09100 6f1eb634c959b57375cc1a77e9e22945 404 Gene3D G3DSA:3.40.640.10 55 279 2.3E-69 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS09100 6f1eb634c959b57375cc1a77e9e22945 404 Pfam PF00155 Aminotransferase class I and II 35 393 8.5E-45 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS04600 149eb80f73b251b283571316cd0d48a9 118 SUPERFAMILY SSF53098 24 115 1.39E-17 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS04600 149eb80f73b251b283571316cd0d48a9 118 Pfam PF00665 Integrase core domain 24 111 1.0E-10 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS04600 149eb80f73b251b283571316cd0d48a9 118 Gene3D G3DSA:3.30.420.10 23 112 1.4E-16 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS04035 d8ca33234c03e70a2c5d041c6e1686be 550 Gene3D G3DSA:3.40.605.10 10 230 1.6E-27 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM402_RS04035 d8ca33234c03e70a2c5d041c6e1686be 550 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 465 2.1E-216 T 06-07-2017 IPR013357 Acetaldehyde dehydrogenase, acetylating AM402_RS04035 d8ca33234c03e70a2c5d041c6e1686be 550 SUPERFAMILY SSF53720 12 451 6.41E-80 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS04035 d8ca33234c03e70a2c5d041c6e1686be 550 Pfam PF00171 Aldehyde dehydrogenase family 12 274 3.7E-30 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM402_RS04035 d8ca33234c03e70a2c5d041c6e1686be 550 Gene3D G3DSA:3.40.309.10 315 407 6.5E-25 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS04035 d8ca33234c03e70a2c5d041c6e1686be 550 Gene3D G3DSA:3.40.309.10 231 278 6.5E-25 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS07315 f610202323b155a756b4c8426aaef3ee 569 Pfam PF11658 Cellulose biosynthesis protein BcsG 21 564 7.2E-220 T 06-07-2017 IPR017744 Cellulose biosynthesis protein BcsG AM402_RS07315 f610202323b155a756b4c8426aaef3ee 569 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 19 567 6.3E-200 T 06-07-2017 IPR017744 Cellulose biosynthesis protein BcsG AM402_RS13085 6bd344493c15994d18b2acab278e55ed 250 SUPERFAMILY SSF110395 3 243 3.27E-74 T 06-07-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM402_RS13085 6bd344493c15994d18b2acab278e55ed 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 37.723 T 06-07-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM402_RS13085 6bd344493c15994d18b2acab278e55ed 250 Pfam PF03932 CutC family 3 200 2.0E-71 T 06-07-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM402_RS13085 6bd344493c15994d18b2acab278e55ed 250 Gene3D G3DSA:3.20.20.380 2 243 3.8E-91 T 06-07-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AM402_RS21365 280ac0367e896e806fd9851907d04a65 85 SUPERFAMILY SSF143120 5 50 1.96E-9 T 06-07-2017 AM402_RS21365 280ac0367e896e806fd9851907d04a65 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 51 3.8E-8 T 06-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM402_RS21365 280ac0367e896e806fd9851907d04a65 85 Gene3D G3DSA:3.40.1620.10 21 50 5.0E-5 T 06-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM402_RS20370 56528421515094546565ce5800fa6f3b 290 SUPERFAMILY SSF103481 34 131 1.96E-8 T 06-07-2017 AM402_RS20370 56528421515094546565ce5800fa6f3b 290 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 5.1E-76 T 06-07-2017 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AM402_RS20370 56528421515094546565ce5800fa6f3b 290 Pfam PF00892 EamA-like transporter family 2 129 1.2E-9 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS20370 56528421515094546565ce5800fa6f3b 290 Pfam PF00892 EamA-like transporter family 139 274 1.4E-8 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS20370 56528421515094546565ce5800fa6f3b 290 SUPERFAMILY SSF103481 180 276 9.55E-8 T 06-07-2017 AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 Gene3D G3DSA:3.40.50.300 21 122 4.4E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 Gene3D G3DSA:3.40.50.300 211 257 4.4E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 Pfam PF00270 DEAD/DEAH box helicase 31 95 1.0E-5 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 SUPERFAMILY SSF52540 211 265 4.4E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 SUPERFAMILY SSF52540 15 120 4.4E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 SUPERFAMILY SSF52540 636 672 4.4E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 SMART SM00491 545 677 4.9E-32 T 06-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 Pfam PF13307 Helicase C-terminal domain 531 689 6.9E-24 T 06-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 Pfam PF06733 DEAD_2 192 264 1.2E-8 T 06-07-2017 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AM402_RS15825 46d03c9229d6c0424aee46901998b02e 702 SMART SM00487 23 305 8.1E-8 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS08920 364e52ed8e379186181a6317034a6809 184 Pfam PF04315 Elongation factor P hydroxylase 12 175 5.7E-78 T 06-07-2017 IPR007411 Elongation factor P hydroxylase AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 Gene3D G3DSA:3.40.190.10 92 196 9.1E-40 T 06-07-2017 AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.4E-19 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 Pfam PF03466 LysR substrate binding domain 93 288 2.1E-14 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.0E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.0E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.0E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 SUPERFAMILY SSF46785 4 111 3.63E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 Gene3D G3DSA:1.10.10.10 1 73 1.8E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 3.6E-110 T 06-07-2017 IPR017685 HTH-type transcriptional regulator ArgP AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 56.179 T 06-07-2017 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AM402_RS07620 75439dd477b9c6ee414b5c2ec670fd5e 299 SUPERFAMILY SSF53850 92 290 2.17E-20 T 06-07-2017 AM402_RS15685 a888ac896d1a7a0ed9fe3fd60d0a2ca1 245 Gene3D G3DSA:3.20.20.70 1 242 5.0E-80 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS15685 a888ac896d1a7a0ed9fe3fd60d0a2ca1 245 SUPERFAMILY SSF51366 1 244 2.09E-69 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM402_RS15685 a888ac896d1a7a0ed9fe3fd60d0a2ca1 245 Pfam PF00977 Histidine biosynthesis protein 1 234 4.1E-76 T 06-07-2017 IPR006062 Histidine biosynthesis GO:0000105 AM402_RS15685 a888ac896d1a7a0ed9fe3fd60d0a2ca1 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.2E-78 T 06-07-2017 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM402_RS15685 a888ac896d1a7a0ed9fe3fd60d0a2ca1 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 36.132 T 06-07-2017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM402_RS08275 486eedba3da9bdc853b8c2a878da09ba 481 SUPERFAMILY SSF116734 4 199 1.96E-39 T 06-07-2017 AM402_RS08275 486eedba3da9bdc853b8c2a878da09ba 481 SUPERFAMILY SSF116734 260 470 1.19E-23 T 06-07-2017 AM402_RS08275 486eedba3da9bdc853b8c2a878da09ba 481 Pfam PF01420 Type I restriction modification DNA specificity domain 6 181 2.0E-25 T 06-07-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 Pfam PF03486 HI0933-like protein 5 392 1.2E-151 T 06-07-2017 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 SUPERFAMILY SSF160996 190 338 1.44E-43 T 06-07-2017 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 SUPERFAMILY SSF51905 3 188 7.51E-59 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 SUPERFAMILY SSF51905 337 395 7.51E-59 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 Gene3D G3DSA:3.50.50.60 339 395 4.8E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 Gene3D G3DSA:3.50.50.60 4 186 4.8E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 Gene3D G3DSA:1.10.8.260 270 322 1.3E-22 T 06-07-2017 IPR023166 HI0933 insert-like domain AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 1.6E-129 T 06-07-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.9E-7 T 06-07-2017 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 6.9E-7 T 06-07-2017 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 6.9E-7 T 06-07-2017 AM402_RS02555 09dcf708e380b4f189a33d969de00ac6 401 Gene3D G3DSA:2.40.30.10 188 269 2.5E-29 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PIRSF PIRSF000350 1 564 1.4E-266 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 132 142 - T 06-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 TIGRFAM TIGR02053 MerA: mercury(II) reductase 99 564 1.1E-186 T 06-07-2017 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF55424 439 562 1.1E-33 T 06-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 196 288 1.13E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 100 148 1.13E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 315 460 1.13E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.30.390.30 435 552 8.7E-39 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.50.50.60 99 239 9.8E-32 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.50.50.60 240 430 7.3E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 440 548 8.3E-30 T 06-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 236 253 2.3E-92 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 472 492 2.3E-92 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 271 288 2.3E-92 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 537 556 2.3E-92 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 109 127 2.3E-92 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 13 23 2.3E-92 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 144 163 2.3E-92 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 291 306 2.3E-92 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.30.70.100 3 68 4.8E-21 T 06-07-2017 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 Pfam PF00403 Heavy-metal-associated domain 3 62 9.1E-10 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF55008 2 70 3.67E-17 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS21825 c4c9e6c81b6a77e58468908080244164 564 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 99 421 9.3E-64 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 Gene3D G3DSA:3.20.20.100 6 272 2.1E-105 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 Pfam PF00248 Aldo/keto reductase family 18 261 5.9E-50 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.8E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 PRINTS PR00069 Aldo-keto reductase signature 196 220 1.8E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.8E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.8E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.8E-46 T 06-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 06-07-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM402_RS19290 07e8342f62fd0146beab091b7eca7626 276 SUPERFAMILY SSF51430 7 271 1.57E-91 T 06-07-2017 IPR023210 NADP-dependent oxidoreductase domain AM402_RS10555 1199f224e3dd4340ef08df1aba42735d 259 Pfam PF10127 Predicted nucleotidyltransferase 1 252 4.0E-62 T 06-07-2017 IPR018775 Nucleotidyltransferase, predicted AM402_RS12365 e6f825394e5eac71c32d269651bbe076 341 Gene3D G3DSA:3.40.640.10 2 248 8.9E-62 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS12365 e6f825394e5eac71c32d269651bbe076 341 Gene3D G3DSA:3.90.1150.10 251 335 1.4E-25 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS12365 e6f825394e5eac71c32d269651bbe076 341 Pfam PF01212 Beta-eliminating lyase 29 290 5.1E-31 T 06-07-2017 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AM402_RS12365 e6f825394e5eac71c32d269651bbe076 341 SUPERFAMILY SSF53383 2 333 3.77E-78 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS16840 bf1e31bab64b7b73d6ed83c74bd188a2 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 06-07-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AM402_RS16840 bf1e31bab64b7b73d6ed83c74bd188a2 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 3.7E-136 T 06-07-2017 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AM402_RS16840 bf1e31bab64b7b73d6ed83c74bd188a2 370 Pfam PF01098 Cell cycle protein 22 364 2.1E-121 T 06-07-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AM402_RS03115 1defc3ae16b14048809fa5fc97ae8074 235 Gene3D G3DSA:3.40.50.300 26 229 4.7E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03115 1defc3ae16b14048809fa5fc97ae8074 235 SUPERFAMILY SSF52540 13 231 2.47E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03115 1defc3ae16b14048809fa5fc97ae8074 235 Pfam PF00005 ABC transporter 55 174 1.7E-5 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS17525 dde9b1178d02fa126d028759e7e7b345 581 Pfam PF08479 POTRA domain, ShlB-type 87 163 1.3E-22 T 06-07-2017 IPR013686 Polypeptide-transport-associated, ShlB-type AM402_RS17525 dde9b1178d02fa126d028759e7e7b345 581 Gene3D G3DSA:3.10.20.310 82 163 3.7E-21 T 06-07-2017 AM402_RS17525 dde9b1178d02fa126d028759e7e7b345 581 PIRSF PIRSF029745 8 580 2.1E-157 T 06-07-2017 IPR027282 Two partner secretion pathway transporter GO:0015031 AM402_RS17525 dde9b1178d02fa126d028759e7e7b345 581 Gene3D G3DSA:2.40.160.50 194 579 2.1E-118 T 06-07-2017 AM402_RS17525 dde9b1178d02fa126d028759e7e7b345 581 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 183 504 4.5E-20 T 06-07-2017 IPR005565 Haemolysin activator HlyB AM402_RS07990 9388255f12066fb46693df4b43fd7f77 178 SUPERFAMILY SSF49401 27 177 9.44E-26 T 06-07-2017 IPR008966 Adhesion domain AM402_RS07990 9388255f12066fb46693df4b43fd7f77 178 Pfam PF00419 Fimbrial protein 28 177 1.0E-14 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS07990 9388255f12066fb46693df4b43fd7f77 178 Gene3D G3DSA:2.60.40.1090 27 177 2.4E-27 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS09210 126267adb9171804912b3abc795f86da 285 Gene3D G3DSA:1.10.12.10 223 273 4.7E-31 T 06-07-2017 IPR014748 Crontonase, C-terminal AM402_RS09210 126267adb9171804912b3abc795f86da 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 4.3E-147 T 06-07-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AM402_RS09210 126267adb9171804912b3abc795f86da 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 279 3.1E-80 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM402_RS09210 126267adb9171804912b3abc795f86da 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.624 T 06-07-2017 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AM402_RS09210 126267adb9171804912b3abc795f86da 285 Gene3D G3DSA:3.90.226.10 23 222 2.7E-69 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS09210 126267adb9171804912b3abc795f86da 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 06-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM402_RS09210 126267adb9171804912b3abc795f86da 285 SUPERFAMILY SSF52096 18 280 5.55E-78 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS18740 aff849b08f792d6753d2ac4e809e67c9 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 2.2E-42 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM402_RS18740 aff849b08f792d6753d2ac4e809e67c9 109 SUPERFAMILY SSF82607 11 103 3.27E-36 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM402_RS18740 aff849b08f792d6753d2ac4e809e67c9 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 2.0E-35 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM402_RS18740 aff849b08f792d6753d2ac4e809e67c9 109 Gene3D G3DSA:3.30.1310.10 1 109 4.0E-51 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM402_RS18740 aff849b08f792d6753d2ac4e809e67c9 109 PIRSF PIRSF004555 3 109 1.7E-39 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM402_RS18740 aff849b08f792d6753d2ac4e809e67c9 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.416 T 06-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM402_RS10120 b9d1d185b699c23ab1f0ac4b84a7b36e 196 SUPERFAMILY SSF55729 10 165 8.51E-40 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS10120 b9d1d185b699c23ab1f0ac4b84a7b36e 196 Gene3D G3DSA:3.40.630.30 10 166 2.6E-39 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS10120 b9d1d185b699c23ab1f0ac4b84a7b36e 196 Pfam PF13302 Acetyltransferase (GNAT) domain 11 144 3.5E-21 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS12975 9a87fa2b08841b7abb8eb1794e8300b9 287 Pfam PF13460 NAD(P)H-binding 8 190 4.5E-21 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12975 9a87fa2b08841b7abb8eb1794e8300b9 287 Gene3D G3DSA:3.40.50.720 1 213 9.4E-45 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12975 9a87fa2b08841b7abb8eb1794e8300b9 287 SUPERFAMILY SSF51735 1 240 4.03E-42 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00650 239f1c021782f0b5b1b5d2a57ff44953 237 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 236 3.1E-77 T 06-07-2017 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 AM402_RS00650 239f1c021782f0b5b1b5d2a57ff44953 237 Gene3D G3DSA:3.40.630.30 88 225 9.5E-21 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS00650 239f1c021782f0b5b1b5d2a57ff44953 237 Pfam PF00583 Acetyltransferase (GNAT) family 151 224 1.1E-10 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS00650 239f1c021782f0b5b1b5d2a57ff44953 237 SUPERFAMILY SSF55729 54 230 1.63E-24 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS00650 239f1c021782f0b5b1b5d2a57ff44953 237 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 236 44.074 T 06-07-2017 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 AM402_RS02210 c5823efddb916ba7ae976d8b83b90728 174 Gene3D G3DSA:3.40.630.30 32 165 2.9E-24 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS02210 c5823efddb916ba7ae976d8b83b90728 174 SUPERFAMILY SSF55729 40 151 2.09E-22 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS02210 c5823efddb916ba7ae976d8b83b90728 174 Pfam PF00583 Acetyltransferase (GNAT) family 65 141 5.9E-16 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS02210 c5823efddb916ba7ae976d8b83b90728 174 PRINTS PR01754 Streptothricin acetyltransferase signature 132 148 2.0E-18 T 06-07-2017 IPR008125 Streptothricin acetyltransferase AM402_RS02210 c5823efddb916ba7ae976d8b83b90728 174 PRINTS PR01754 Streptothricin acetyltransferase signature 155 168 2.0E-18 T 06-07-2017 IPR008125 Streptothricin acetyltransferase AM402_RS02210 c5823efddb916ba7ae976d8b83b90728 174 PRINTS PR01754 Streptothricin acetyltransferase signature 111 126 2.0E-18 T 06-07-2017 IPR008125 Streptothricin acetyltransferase AM402_RS02210 c5823efddb916ba7ae976d8b83b90728 174 PRINTS PR01754 Streptothricin acetyltransferase signature 87 102 2.0E-18 T 06-07-2017 IPR008125 Streptothricin acetyltransferase AM402_RS06715 d4da94e8f29b384864d4976a74b9afb9 488 SUPERFAMILY SSF49899 338 486 3.48E-31 T 06-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AM402_RS06715 d4da94e8f29b384864d4976a74b9afb9 488 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 384 448 3.9E-7 T 06-07-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal AM402_RS06715 d4da94e8f29b384864d4976a74b9afb9 488 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 28 338 3.1E-95 T 06-07-2017 IPR013148 Glycosyl hydrolase family 32, N-terminal AM402_RS06715 d4da94e8f29b384864d4976a74b9afb9 488 SUPERFAMILY SSF75005 21 339 2.36E-106 T 06-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM402_RS06715 d4da94e8f29b384864d4976a74b9afb9 488 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 17 458 1.5E-132 T 06-07-2017 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AM402_RS06715 d4da94e8f29b384864d4976a74b9afb9 488 SMART SM00640 28 448 2.9E-143 T 06-07-2017 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AM402_RS06715 d4da94e8f29b384864d4976a74b9afb9 488 Gene3D G3DSA:2.115.10.20 33 316 4.9E-26 T 06-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AM402_RS06715 d4da94e8f29b384864d4976a74b9afb9 488 Gene3D G3DSA:2.60.120.560 317 483 4.1E-30 T 06-07-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal AM402_RS08325 e2677527b9dd38c48af51de3a85ee016 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 72.061 T 06-07-2017 IPR000037 SsrA-binding protein GO:0003723 AM402_RS08325 e2677527b9dd38c48af51de3a85ee016 160 Pfam PF01668 SmpB protein 13 75 5.5E-28 T 06-07-2017 IPR000037 SsrA-binding protein GO:0003723 AM402_RS08325 e2677527b9dd38c48af51de3a85ee016 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 06-07-2017 IPR020081 SsrA-binding protein, conserved site AM402_RS08325 e2677527b9dd38c48af51de3a85ee016 160 Gene3D G3DSA:2.40.280.10 13 133 2.4E-49 T 06-07-2017 IPR023620 Small protein B AM402_RS08325 e2677527b9dd38c48af51de3a85ee016 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 8.0E-54 T 06-07-2017 IPR000037 SsrA-binding protein GO:0003723 AM402_RS08325 e2677527b9dd38c48af51de3a85ee016 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-61 T 06-07-2017 IPR000037 SsrA-binding protein GO:0003723 AM402_RS08325 e2677527b9dd38c48af51de3a85ee016 160 SUPERFAMILY SSF74982 8 138 8.11E-50 T 06-07-2017 IPR023620 Small protein B AM402_RS04295 b38a8702f744bdf0f3dca63ada017dfc 264 SMART SM00047 113 239 4.3E-5 T 06-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM402_RS04295 b38a8702f744bdf0f3dca63ada017dfc 264 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 126 250 2.9E-15 T 06-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.542 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 9.6E-176 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 Gene3D G3DSA:3.30.930.10 4 213 7.6E-106 T 06-07-2017 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 Gene3D G3DSA:1.20.58.180 215 298 6.0E-37 T 06-07-2017 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 SUPERFAMILY SSF55681 8 292 4.12E-134 T 06-07-2017 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 1.5E-149 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.0E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.0E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.0E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.0E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.0E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03340 5543073dbe75ebbde39522c7547dda9a 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.0E-71 T 06-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS08625 17779cd1ca79ddabe62078571aaeb8f7 393 Pfam PF04055 Radical SAM superfamily 129 298 1.3E-18 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS08625 17779cd1ca79ddabe62078571aaeb8f7 393 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 23 378 1.1E-169 T 06-07-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS08625 17779cd1ca79ddabe62078571aaeb8f7 393 Gene3D G3DSA:3.20.20.70 126 333 2.5E-16 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS08625 17779cd1ca79ddabe62078571aaeb8f7 393 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 26 373 74.164 T 06-07-2017 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS08625 17779cd1ca79ddabe62078571aaeb8f7 393 SUPERFAMILY SSF102114 125 343 6.93E-16 T 06-07-2017 AM402_RS08625 17779cd1ca79ddabe62078571aaeb8f7 393 PIRSF PIRSF006004 19 386 5.8E-146 T 06-07-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS13860 20f21bf9161db5a72a82b94d57142a7f 156 Gene3D G3DSA:1.10.530.40 17 155 8.4E-57 T 06-07-2017 IPR023347 Lysozyme domain GO:0003796 AM402_RS13860 20f21bf9161db5a72a82b94d57142a7f 156 SUPERFAMILY SSF53955 7 155 1.43E-56 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS13860 20f21bf9161db5a72a82b94d57142a7f 156 Pfam PF00959 Phage lysozyme 41 146 1.5E-25 T 06-07-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM402_RS04245 4294c7a544e291271985804efe6d4a95 264 SUPERFAMILY SSF52540 7 229 3.03E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04245 4294c7a544e291271985804efe6d4a95 264 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS04245 4294c7a544e291271985804efe6d4a95 264 Pfam PF00005 ABC transporter 20 167 1.8E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS04245 4294c7a544e291271985804efe6d4a95 264 Gene3D G3DSA:3.40.50.300 7 234 8.5E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04245 4294c7a544e291271985804efe6d4a95 264 SMART SM00382 28 215 1.6E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS11290 bdd2431b74ac589993fa03f48041d779 517 Pfam PF13520 Amino acid permease 13 452 4.5E-55 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS11290 bdd2431b74ac589993fa03f48041d779 517 PIRSF PIRSF006060 7 486 2.6E-59 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS11290 bdd2431b74ac589993fa03f48041d779 517 TIGRFAM TIGR00910 2A0307_GadC: glutamate:gamma-aminobutyrate antiporter 1 508 6.5E-259 T 06-07-2017 IPR004759 Glutamate:g-aminobutyrate antiporter GO:0006865|GO:0016021 AM402_RS04065 d32d8c0720e9731ee36e911f3966c290 214 Pfam PF06130 Phosphate propanoyltransferase 139 204 2.8E-18 T 06-07-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 AM402_RS04065 d32d8c0720e9731ee36e911f3966c290 214 Pfam PF06130 Phosphate propanoyltransferase 30 109 2.1E-29 T 06-07-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 AM402_RS04065 d32d8c0720e9731ee36e911f3966c290 214 PIRSF PIRSF010130 2 214 6.1E-89 T 06-07-2017 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 AM402_RS08005 ea1d90440dccc458f9cc376e2136b3fa 447 Pfam PF00419 Fimbrial protein 262 447 1.8E-25 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08005 ea1d90440dccc458f9cc376e2136b3fa 447 Gene3D G3DSA:2.60.40.1090 267 447 2.0E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08005 ea1d90440dccc458f9cc376e2136b3fa 447 SUPERFAMILY SSF49401 343 447 1.19E-10 T 06-07-2017 IPR008966 Adhesion domain AM402_RS08005 ea1d90440dccc458f9cc376e2136b3fa 447 SUPERFAMILY SSF49401 268 310 1.19E-10 T 06-07-2017 IPR008966 Adhesion domain AM402_RS08005 ea1d90440dccc458f9cc376e2136b3fa 447 PIRSF PIRSF029766 5 447 2.3E-144 T 06-07-2017 IPR011228 Uncharacterised conserved protein UCP029766 AM402_RS19920 cede7308e71c5186db00069d314ac86e 238 Gene3D G3DSA:3.20.20.190 1 236 1.3E-68 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM402_RS19920 cede7308e71c5186db00069d314ac86e 238 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 233 2.7E-41 T 06-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM402_RS19920 cede7308e71c5186db00069d314ac86e 238 SUPERFAMILY SSF51695 1 236 8.11E-71 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 Pfam PF08345 Flagellar M-ring protein C-terminal 255 451 2.3E-51 T 06-07-2017 IPR013556 Flagellar M-ring C-terminal AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 572 3.1E-166 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 Pfam PF01514 Secretory protein of YscJ/FliF family 35 223 1.7E-76 T 06-07-2017 IPR006182 Secretory protein YscJ/FliF AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 PRINTS PR01009 Flagellar M-ring protein signature 156 170 3.6E-41 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 PRINTS PR01009 Flagellar M-ring protein signature 124 142 3.6E-41 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 PRINTS PR01009 Flagellar M-ring protein signature 366 390 3.6E-41 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 PRINTS PR01009 Flagellar M-ring protein signature 268 286 3.6E-41 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 PRINTS PR01009 Flagellar M-ring protein signature 199 217 3.6E-41 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM402_RS09810 c93233f5477c02e1d7f504839f37875b 573 PIRSF PIRSF004862 1 573 1.2E-162 T 06-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 Pfam PF01645 Conserved region in glutamate synthase 793 1156 1.3E-156 T 06-07-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 424 1.9E-172 T 06-07-2017 IPR017932 Glutamine amidotransferase type 2 domain AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 Gene3D G3DSA:3.20.20.70 803 1197 4.4E-164 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 Gene3D G3DSA:2.160.20.60 1212 1464 1.8E-90 T 06-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 SUPERFAMILY SSF69336 1210 1464 6.67E-85 T 06-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 Pfam PF01493 GXGXG motif 1235 1417 1.2E-75 T 06-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 SUPERFAMILY SSF56235 12 428 1.2E-147 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 SUPERFAMILY SSF51395 444 1188 6.96E-249 T 06-07-2017 AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 Gene3D G3DSA:3.60.20.10 12 432 2.7E-167 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 Pfam PF04898 Glutamate synthase central domain 457 737 1.8E-106 T 06-07-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AM402_RS19625 77727e1bc25d5e75cd9da4cc636b1312 1485 Gene3D G3DSA:3.20.20.70 439 775 1.2E-99 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS12195 c6c180d3326cbb3e91d01cb54ba792bc 347 Gene3D G3DSA:3.40.50.720 1 130 1.2E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12195 c6c180d3326cbb3e91d01cb54ba792bc 347 Gene3D G3DSA:3.30.360.10 131 341 2.2E-33 T 06-07-2017 AM402_RS12195 c6c180d3326cbb3e91d01cb54ba792bc 347 SUPERFAMILY SSF51735 2 196 1.58E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12195 c6c180d3326cbb3e91d01cb54ba792bc 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 233 1.7E-12 T 06-07-2017 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM402_RS12195 c6c180d3326cbb3e91d01cb54ba792bc 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.7E-26 T 06-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM402_RS06205 7c98df2d9b9fb31336bff48b2ffd63b0 259 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06205 7c98df2d9b9fb31336bff48b2ffd63b0 259 Pfam PF00849 RNA pseudouridylate synthase 11 170 7.5E-31 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06205 7c98df2d9b9fb31336bff48b2ffd63b0 259 SUPERFAMILY SSF55120 2 237 9.44E-60 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 Gene3D G3DSA:3.40.50.720 5 250 6.3E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 189 2.5E-4 T 06-07-2017 AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 SUPERFAMILY SSF51735 8 250 3.81E-71 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 4.1E-54 T 06-07-2017 AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.3E-39 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.8E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.8E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS03080 6611ae995eece74aa73bedecb7e9923c 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.8E-13 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS11150 db443295a1b61c4a52aac4db10fb1d51 444 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 436 4.3E-164 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AM402_RS11150 db443295a1b61c4a52aac4db10fb1d51 444 PIRSF PIRSF006446 2 444 1.0E-215 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 SMART SM00941 350 424 2.2E-30 T 06-07-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.3E-23 T 06-07-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 06-07-2017 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 52.896 T 06-07-2017 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 6.9E-52 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 Gene3D G3DSA:3.90.1170.30 339 432 2.4E-34 T 06-07-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 Gene3D G3DSA:3.40.1030.10 75 336 1.9E-112 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 437 1.0E-228 T 06-07-2017 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.0E-167 T 06-07-2017 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 SUPERFAMILY SSF52418 75 334 5.36E-90 T 06-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 SUPERFAMILY SSF54680 337 438 1.44E-30 T 06-07-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 Gene3D G3DSA:1.20.970.10 2 68 4.1E-30 T 06-07-2017 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 SUPERFAMILY SSF47648 3 70 1.15E-21 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.4E-19 T 06-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05600 1b2bc63bb39b51503b426dd2403c2d7d 440 PIRSF PIRSF000478 1 439 6.3E-156 T 06-07-2017 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS03525 a3d2508f9a42703988a76434b589e869 289 Gene3D G3DSA:3.40.50.300 1 287 9.2E-126 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03525 a3d2508f9a42703988a76434b589e869 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM402_RS03525 a3d2508f9a42703988a76434b589e869 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.4E-73 T 06-07-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 AM402_RS03525 a3d2508f9a42703988a76434b589e869 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.5E-30 T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM402_RS03525 a3d2508f9a42703988a76434b589e869 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 4.5E-30 T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM402_RS03525 a3d2508f9a42703988a76434b589e869 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 4.5E-30 T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM402_RS03525 a3d2508f9a42703988a76434b589e869 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 4.5E-30 T 06-07-2017 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AM402_RS03525 a3d2508f9a42703988a76434b589e869 289 SUPERFAMILY SSF52540 4 285 2.87E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07545 f229f65e3fc9e2d28815265cb3392f74 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 6.8E-9 T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site AM402_RS07545 f229f65e3fc9e2d28815265cb3392f74 147 Gene3D G3DSA:3.30.700.10 13 143 8.5E-30 T 06-07-2017 AM402_RS07545 f229f65e3fc9e2d28815265cb3392f74 147 SUPERFAMILY SSF54523 13 120 5.23E-19 T 06-07-2017 AM402_RS07545 f229f65e3fc9e2d28815265cb3392f74 147 Pfam PF13633 Prokaryotic N-terminal methylation site 10 36 2.2E-10 T 06-07-2017 IPR012902 Prokaryotic N-terminal methylation site AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 308 36.786 T 06-07-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 06-07-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 SUPERFAMILY SSF53328 5 207 6.02E-69 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 SUPERFAMILY SSF50486 208 310 5.02E-34 T 06-07-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 Pfam PF02911 Formyl transferase, C-terminal domain 207 305 1.8E-30 T 06-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 Gene3D G3DSA:3.40.50.170 4 208 3.2E-75 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 Pfam PF00551 Formyl transferase 6 183 6.4E-52 T 06-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 Gene3D G3DSA:3.10.25.10 210 308 9.6E-35 T 06-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM402_RS00845 7a1e7553777c6d177920674e91e1854e 316 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 5.3E-111 T 06-07-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM402_RS12715 198aa07b0fba050b153d8d5838c2e2b5 272 SUPERFAMILY SSF46785 114 198 4.05E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12715 198aa07b0fba050b153d8d5838c2e2b5 272 Pfam PF03551 Transcriptional regulator PadR-like family 119 188 2.6E-16 T 06-07-2017 IPR005149 Transcription regulator PadR, N-terminal AM402_RS12715 198aa07b0fba050b153d8d5838c2e2b5 272 Gene3D G3DSA:1.10.10.10 104 202 9.4E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09310 19e651d8a03fcb0809edf7208732e63f 245 Pfam PF00717 Peptidase S24-like 159 223 1.6E-6 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS09310 19e651d8a03fcb0809edf7208732e63f 245 SUPERFAMILY SSF51306 111 240 2.44E-20 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS09310 19e651d8a03fcb0809edf7208732e63f 245 Gene3D G3DSA:1.10.260.40 10 80 1.0E-11 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS09310 19e651d8a03fcb0809edf7208732e63f 245 Gene3D G3DSA:2.10.109.10 113 238 2.6E-14 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS06430 3fdca9994de1d36c21cf5fed466d285a 455 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM402_RS06430 3fdca9994de1d36c21cf5fed466d285a 455 PIRSF PIRSF006060 1 453 1.6E-77 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS06430 3fdca9994de1d36c21cf5fed466d285a 455 Pfam PF00324 Amino acid permease 15 454 2.2E-108 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM402_RS02940 e7761b2f0ee14a0e3ac2a1e323d07d09 548 Gene3D G3DSA:3.20.14.10 369 542 1.2E-22 T 06-07-2017 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 AM402_RS02940 e7761b2f0ee14a0e3ac2a1e323d07d09 548 SUPERFAMILY SSF53743 193 373 2.09E-38 T 06-07-2017 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 AM402_RS02940 e7761b2f0ee14a0e3ac2a1e323d07d09 548 SUPERFAMILY SSF53743 23 156 2.09E-38 T 06-07-2017 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 AM402_RS18445 ee914a3f5dd3d14e49d69c00476ac4ef 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 06-07-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site AM402_RS18445 ee914a3f5dd3d14e49d69c00476ac4ef 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.717 T 06-07-2017 IPR023063 FeS cluster insertion protein ErpA GO:0016226 AM402_RS18445 ee914a3f5dd3d14e49d69c00476ac4ef 114 Gene3D G3DSA:2.60.300.12 9 104 2.3E-31 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS18445 ee914a3f5dd3d14e49d69c00476ac4ef 114 SUPERFAMILY SSF89360 8 103 2.55E-31 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS18445 ee914a3f5dd3d14e49d69c00476ac4ef 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.4E-38 T 06-07-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AM402_RS18445 ee914a3f5dd3d14e49d69c00476ac4ef 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 3.8E-20 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS18040 00261e6ef304e2002a74575d813defc8 214 SUPERFAMILY SSF56784 1 208 4.07E-47 T 06-07-2017 IPR023214 HAD-like domain AM402_RS18040 00261e6ef304e2002a74575d813defc8 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 56 189 7.3E-17 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS18040 00261e6ef304e2002a74575d813defc8 214 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 3 189 1.7E-62 T 06-07-2017 IPR010976 Beta-phosphoglucomutase hydrolase AM402_RS18040 00261e6ef304e2002a74575d813defc8 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 189 3.9E-25 T 06-07-2017 IPR023214 HAD-like domain AM402_RS18040 00261e6ef304e2002a74575d813defc8 214 Gene3D G3DSA:3.40.50.1000 95 208 2.9E-35 T 06-07-2017 IPR023214 HAD-like domain AM402_RS18040 00261e6ef304e2002a74575d813defc8 214 Gene3D G3DSA:3.40.50.1000 1 15 2.9E-35 T 06-07-2017 IPR023214 HAD-like domain AM402_RS18040 00261e6ef304e2002a74575d813defc8 214 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 3 189 4.7E-80 T 06-07-2017 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-6317|MetaCyc: PWY-7459 AM402_RS18040 00261e6ef304e2002a74575d813defc8 214 Gene3D G3DSA:1.10.150.240 16 93 6.3E-31 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 92 109 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 157 214 5.5E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 SUPERFAMILY SSF49354 16 134 4.71E-44 T 06-07-2017 IPR008962 PapD-like AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 PRINTS PR00969 Pili chaperone signature 65 86 1.1E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 PRINTS PR00969 Pili chaperone signature 152 167 1.1E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 PRINTS PR00969 Pili chaperone signature 116 131 1.1E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 PRINTS PR00969 Pili chaperone signature 21 30 1.1E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 PRINTS PR00969 Pili chaperone signature 93 110 1.1E-32 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 Gene3D G3DSA:2.60.40.1070 139 215 3.2E-22 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 135 5.7E-44 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 Gene3D G3DSA:2.60.40.360 20 135 1.6E-46 T 06-07-2017 IPR008962 PapD-like AM402_RS06600 3e121653c3ebb6626bafc8b73c8ede91 221 SUPERFAMILY SSF49584 137 215 7.85E-21 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS00290 ff625068172160cb7b912da853ccc0f7 457 SUPERFAMILY SSF56176 344 428 9.54E-23 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM402_RS00290 ff625068172160cb7b912da853ccc0f7 457 Pfam PF01595 Domain of unknown function DUF21 6 197 7.1E-38 T 06-07-2017 IPR002550 Domain of unknown function DUF21 AM402_RS00290 ff625068172160cb7b912da853ccc0f7 457 SUPERFAMILY SSF54631 200 335 2.59E-20 T 06-07-2017 AM402_RS00290 ff625068172160cb7b912da853ccc0f7 457 SMART SM01091 346 426 4.5E-29 T 06-07-2017 IPR005170 Transporter-associated domain AM402_RS00290 ff625068172160cb7b912da853ccc0f7 457 Gene3D G3DSA:3.30.465.10 341 425 7.3E-27 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM402_RS00290 ff625068172160cb7b912da853ccc0f7 457 Gene3D G3DSA:3.10.580.10 198 335 1.0E-11 T 06-07-2017 AM402_RS00290 ff625068172160cb7b912da853ccc0f7 457 Pfam PF03471 Transporter associated domain 347 425 4.7E-22 T 06-07-2017 IPR005170 Transporter-associated domain AM402_RS02520 df0fa4564ef89325dc530444d42dc72f 185 Pfam PF00293 NUDIX domain 46 149 9.4E-14 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS02520 df0fa4564ef89325dc530444d42dc72f 185 Gene3D G3DSA:3.90.79.10 9 181 1.0E-39 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS02520 df0fa4564ef89325dc530444d42dc72f 185 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM402_RS02520 df0fa4564ef89325dc530444d42dc72f 185 SUPERFAMILY SSF55811 6 180 1.22E-34 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS09010 84510c4c9c20465951aa72374a61fa7f 301 SUPERFAMILY SSF51735 1 298 9.06E-42 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS09010 84510c4c9c20465951aa72374a61fa7f 301 Gene3D G3DSA:3.90.25.10 199 246 4.5E-7 T 06-07-2017 AM402_RS09010 84510c4c9c20465951aa72374a61fa7f 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 222 5.3E-21 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AM402_RS09010 84510c4c9c20465951aa72374a61fa7f 301 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.3E-19 T 06-07-2017 IPR013549 Domain of unknown function DUF1731 AM402_RS09010 84510c4c9c20465951aa72374a61fa7f 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 8.8E-114 T 06-07-2017 IPR010099 Epimerase family protein SDR39U1 AM402_RS09010 84510c4c9c20465951aa72374a61fa7f 301 Gene3D G3DSA:3.40.50.720 1 198 2.5E-22 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Gene3D G3DSA:2.60.34.10 387 528 8.5E-55 T 06-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Gene3D G3DSA:3.30.30.30 70 117 4.1E-7 T 06-07-2017 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 70 78 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 4.1E-54 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 SUPERFAMILY SSF100934 504 615 1.82E-36 T 06-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Gene3D G3DSA:3.30.420.40 314 356 5.0E-33 T 06-07-2017 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Gene3D G3DSA:3.30.420.40 206 238 5.0E-33 T 06-07-2017 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Pfam PF00012 Hsp70 protein 22 600 7.7E-189 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 7.1E-268 T 06-07-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.335 T 06-07-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Gene3D G3DSA:3.90.640.10 239 310 1.7E-7 T 06-07-2017 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 SUPERFAMILY SSF53067 20 196 6.99E-49 T 06-07-2017 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Gene3D G3DSA:1.20.1270.10 529 615 1.5E-31 T 06-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Gene3D G3DSA:3.30.420.40 133 205 2.6E-52 T 06-07-2017 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 Gene3D G3DSA:3.30.420.40 22 69 2.6E-52 T 06-07-2017 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 SUPERFAMILY SSF100920 384 535 1.2E-51 T 06-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM402_RS08585 5acf9f8a49eae42b1b9d500716291e83 616 SUPERFAMILY SSF53067 200 377 8.19E-52 T 06-07-2017 AM402_RS04400 1d2bed2c1e8bdbf30ee676d524f9c977 275 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 7 254 3.1E-78 T 06-07-2017 IPR008275 CoA enzyme activase AM402_RS04400 1d2bed2c1e8bdbf30ee676d524f9c977 275 SUPERFAMILY SSF53067 7 259 2.6E-37 T 06-07-2017 AM402_RS04400 1d2bed2c1e8bdbf30ee676d524f9c977 275 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 9 256 1.5E-63 T 06-07-2017 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AM402_RS04400 1d2bed2c1e8bdbf30ee676d524f9c977 275 Gene3D G3DSA:3.30.420.40 99 237 3.3E-46 T 06-07-2017 AM402_RS13480 a798ede9fbf895880fcd2d902f7c505e 292 Pfam PF01435 Peptidase family M48 75 287 8.4E-37 T 06-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM402_RS13480 a798ede9fbf895880fcd2d902f7c505e 292 Gene3D G3DSA:3.30.2010.10 69 156 3.7E-32 T 06-07-2017 AM402_RS13480 a798ede9fbf895880fcd2d902f7c505e 292 Hamap MF_00188 Protease HtpX [htpX]. 1 288 25.791 T 06-07-2017 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AM402_RS14275 ba19a4a207c5e161d0e3131516ca502c 487 SUPERFAMILY SSF55874 338 477 8.12E-32 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS14275 ba19a4a207c5e161d0e3131516ca502c 487 SMART SM00387 375 481 1.4E-24 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS14275 ba19a4a207c5e161d0e3131516ca502c 487 Pfam PF08918 PhoQ Sensor 8 186 5.6E-76 T 06-07-2017 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 AM402_RS14275 ba19a4a207c5e161d0e3131516ca502c 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 3.7E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS14275 ba19a4a207c5e161d0e3131516ca502c 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 3.7E-8 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS14275 ba19a4a207c5e161d0e3131516ca502c 487 Gene3D G3DSA:3.30.565.10 340 478 5.4E-32 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS14275 ba19a4a207c5e161d0e3131516ca502c 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 478 1.5E-14 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS06045 97b7e53059408813b3ec4414e6a7b571 526 Gene3D G3DSA:1.10.3720.10 284 523 7.6E-28 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS06045 97b7e53059408813b3ec4414e6a7b571 526 Gene3D G3DSA:1.10.3720.10 5 258 4.3E-34 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS06045 97b7e53059408813b3ec4414e6a7b571 526 SUPERFAMILY SSF161098 281 520 8.5E-29 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS06045 97b7e53059408813b3ec4414e6a7b571 526 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 250 7.2E-13 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS06045 97b7e53059408813b3ec4414e6a7b571 526 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 3 517 1.5E-225 T 06-07-2017 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AM402_RS06045 97b7e53059408813b3ec4414e6a7b571 526 SUPERFAMILY SSF161098 8 256 1.57E-39 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS09815 7fe0fbe0e6631159ac2aa74f5cb00ddb 110 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 11 110 17.749 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM402_RS09815 7fe0fbe0e6631159ac2aa74f5cb00ddb 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 74 90 7.4E-18 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM402_RS09815 7fe0fbe0e6631159ac2aa74f5cb00ddb 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 95 108 7.4E-18 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM402_RS09815 7fe0fbe0e6631159ac2aa74f5cb00ddb 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 39 55 7.4E-18 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM402_RS09815 7fe0fbe0e6631159ac2aa74f5cb00ddb 110 Pfam PF02049 Flagellar hook-basal body complex protein FliE 26 110 3.3E-27 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM402_RS09815 7fe0fbe0e6631159ac2aa74f5cb00ddb 110 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 12 110 9.4E-28 T 06-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM402_RS15750 0c2d569e15892fffba315ef294c99364 155 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 6 125 21.559 T 06-07-2017 IPR022957 Uncharacterised protein family UPF0299 AM402_RS15750 0c2d569e15892fffba315ef294c99364 155 Pfam PF03788 LrgA family 25 115 1.6E-30 T 06-07-2017 IPR005538 LrgA/CidA family GO:0016021 AM402_RS08150 f123c8c243afb0401e1765097bedb344 127 Pfam PF03692 Putative zinc- or iron-chelating domain 15 107 1.3E-9 T 06-07-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein AM402_RS03250 812e67160fd08e662ec500335c976325 304 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 1.8E-49 T 06-07-2017 IPR012660 Thioesterase, putative AM402_RS03250 812e67160fd08e662ec500335c976325 304 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 298 1.2E-47 T 06-07-2017 IPR012660 Thioesterase, putative AM402_RS03250 812e67160fd08e662ec500335c976325 304 Gene3D G3DSA:3.10.129.10 146 298 4.1E-62 T 06-07-2017 IPR029069 HotDog domain AM402_RS03250 812e67160fd08e662ec500335c976325 304 Gene3D G3DSA:3.40.630.30 9 145 5.0E-24 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS03250 812e67160fd08e662ec500335c976325 304 Pfam PF00583 Acetyltransferase (GNAT) family 51 123 1.1E-12 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS03250 812e67160fd08e662ec500335c976325 304 SUPERFAMILY SSF55729 2 146 7.89E-28 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS03250 812e67160fd08e662ec500335c976325 304 SUPERFAMILY SSF54637 155 297 3.02E-39 T 06-07-2017 IPR029069 HotDog domain AM402_RS03635 96a0a78b32a751bfca384f59161a99d5 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.7E-70 T 06-07-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM402_RS03635 96a0a78b32a751bfca384f59161a99d5 156 Gene3D G3DSA:1.10.455.10 8 156 9.2E-67 T 06-07-2017 IPR023798 Ribosomal protein S7 domain AM402_RS03635 96a0a78b32a751bfca384f59161a99d5 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.093 T 06-07-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM402_RS03635 96a0a78b32a751bfca384f59161a99d5 156 SUPERFAMILY SSF47973 6 149 2.62E-59 T 06-07-2017 IPR023798 Ribosomal protein S7 domain AM402_RS03635 96a0a78b32a751bfca384f59161a99d5 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 06-07-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS03635 96a0a78b32a751bfca384f59161a99d5 156 PIRSF PIRSF002122 3 156 5.3E-63 T 06-07-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 AM402_RS03635 96a0a78b32a751bfca384f59161a99d5 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.5E-64 T 06-07-2017 IPR023798 Ribosomal protein S7 domain AM402_RS03715 f128fd35cb3ccffb50246576cef9a950 215 Pfam PF02581 Thiamine monophosphate synthase/TENI 23 192 3.0E-56 T 06-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM402_RS03715 f128fd35cb3ccffb50246576cef9a950 215 SUPERFAMILY SSF51391 11 210 8.37E-63 T 06-07-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM402_RS03715 f128fd35cb3ccffb50246576cef9a950 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 210 20.394 T 06-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM402_RS03715 f128fd35cb3ccffb50246576cef9a950 215 Gene3D G3DSA:3.20.20.70 6 211 1.0E-68 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS03715 f128fd35cb3ccffb50246576cef9a950 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 23 203 3.7E-56 T 06-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM402_RS11210 74fc2c6230eab3a90536447b6bb795f7 288 Pfam PF03618 Kinase/pyrophosphorylase 20 278 8.9E-73 T 06-07-2017 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AM402_RS11210 74fc2c6230eab3a90536447b6bb795f7 288 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 17 287 71.487 T 06-07-2017 IPR026530 Phosphoenolpyruvate synthase regulatory protein AM402_RS20455 a3314226e497ae8c35095c42fe53146c 382 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 17 371 1.7E-168 T 06-07-2017 IPR017510 Release factor H-coupled RctB family protein AM402_RS20455 a3314226e497ae8c35095c42fe53146c 382 SUPERFAMILY SSF103365 6 376 7.32E-104 T 06-07-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM402_RS20455 a3314226e497ae8c35095c42fe53146c 382 Pfam PF01139 tRNA-splicing ligase RtcB 33 107 5.3E-11 T 06-07-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM402_RS20455 a3314226e497ae8c35095c42fe53146c 382 Pfam PF01139 tRNA-splicing ligase RtcB 130 376 1.2E-59 T 06-07-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM402_RS19460 675113432562d5a80acbe65d5f8e545b 263 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 181 257 2.1E-14 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS19460 675113432562d5a80acbe65d5f8e545b 263 Gene3D G3DSA:3.30.1150.10 149 257 5.7E-18 T 06-07-2017 AM402_RS19460 675113432562d5a80acbe65d5f8e545b 263 SUPERFAMILY SSF74653 156 250 1.27E-18 T 06-07-2017 AM402_RS19460 675113432562d5a80acbe65d5f8e545b 263 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 180 246 2.8E-14 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS04425 0efeb33f0ccc27f031ae6b5e5f07d8cb 258 Pfam PF01012 Electron transfer flavoprotein domain 23 206 4.0E-32 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM402_RS04425 0efeb33f0ccc27f031ae6b5e5f07d8cb 258 SMART SM00893 21 214 5.4E-35 T 06-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM402_RS04425 0efeb33f0ccc27f031ae6b5e5f07d8cb 258 SUPERFAMILY SSF52402 1 239 4.19E-51 T 06-07-2017 AM402_RS04425 0efeb33f0ccc27f031ae6b5e5f07d8cb 258 Gene3D G3DSA:3.40.50.620 1 254 6.5E-59 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS04425 0efeb33f0ccc27f031ae6b5e5f07d8cb 258 PIRSF PIRSF000090 1 258 5.5E-53 T 06-07-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 AM402_RS00450 9194d9f11d5072e239728f599b7219e8 181 SUPERFAMILY SSF53098 3 179 8.97E-49 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS00450 9194d9f11d5072e239728f599b7219e8 181 Gene3D G3DSA:3.30.420.10 4 180 1.1E-73 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS00450 9194d9f11d5072e239728f599b7219e8 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.554 T 06-07-2017 IPR022894 Oligoribonuclease GO:0016788 AM402_RS00450 9194d9f11d5072e239728f599b7219e8 181 SMART SM00479 7 180 8.3E-22 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS00450 9194d9f11d5072e239728f599b7219e8 181 Pfam PF00929 Exonuclease 9 170 5.1E-37 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS01995 eb46279584dd19ed17810d6790fc0148 195 SUPERFAMILY SSF53706 36 195 1.83E-54 T 06-07-2017 AM402_RS01995 eb46279584dd19ed17810d6790fc0148 195 SMART SM00926 43 104 1.6E-22 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS01995 eb46279584dd19ed17810d6790fc0148 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM402_RS01995 eb46279584dd19ed17810d6790fc0148 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 1.4E-19 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS01995 eb46279584dd19ed17810d6790fc0148 195 Gene3D G3DSA:2.20.25.90 37 108 1.9E-24 T 06-07-2017 AM402_RS01995 eb46279584dd19ed17810d6790fc0148 195 Gene3D G3DSA:3.40.50.740 109 173 8.5E-13 T 06-07-2017 AM402_RS04325 7ca4e001d87212ad54f21fe32175dbc0 220 Gene3D G3DSA:3.20.20.70 1 212 1.6E-62 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS04325 7ca4e001d87212ad54f21fe32175dbc0 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 213 1.6E-74 T 06-07-2017 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM402_RS04325 7ca4e001d87212ad54f21fe32175dbc0 220 Pfam PF00923 Transaldolase 3 200 8.8E-46 T 06-07-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AM402_RS04325 7ca4e001d87212ad54f21fe32175dbc0 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 06-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AM402_RS04325 7ca4e001d87212ad54f21fe32175dbc0 220 SUPERFAMILY SSF51569 1 212 7.85E-64 T 06-07-2017 AM402_RS06490 f754f32f3f385d87a8588225482489fb 160 SUPERFAMILY SSF69765 1 156 1.83E-66 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM402_RS06490 f754f32f3f385d87a8588225482489fb 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.464 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM402_RS06490 f754f32f3f385d87a8588225482489fb 160 Gene3D G3DSA:3.30.1330.50 1 156 4.6E-73 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM402_RS06490 f754f32f3f385d87a8588225482489fb 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 6.6E-72 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM402_RS06490 f754f32f3f385d87a8588225482489fb 160 Pfam PF02542 YgbB family 1 154 2.6E-67 T 06-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM402_RS06490 f754f32f3f385d87a8588225482489fb 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 06-07-2017 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Pfam PF00684 DnaJ central domain 146 206 3.5E-15 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 42.492 T 06-07-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Gene3D G3DSA:1.10.287.110 1 104 5.6E-38 T 06-07-2017 IPR001623 DnaJ domain AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Gene3D G3DSA:2.60.260.20 114 135 4.8E-23 T 06-07-2017 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Gene3D G3DSA:2.60.260.20 198 252 4.8E-23 T 06-07-2017 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Gene3D G3DSA:2.60.260.20 255 332 3.4E-22 T 06-07-2017 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Gene3D G3DSA:2.10.230.10 136 197 6.5E-26 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Pfam PF01556 DnaJ C terminal domain 119 332 1.9E-44 T 06-07-2017 IPR002939 Chaperone DnaJ, C-terminal AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 SUPERFAMILY SSF49493 258 343 9.81E-22 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 06-07-2017 IPR018253 DnaJ domain, conserved site AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 PRINTS PR00625 DnaJ domain signature 62 81 2.3E-33 T 06-07-2017 IPR001623 DnaJ domain AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 PRINTS PR00625 DnaJ domain signature 25 40 2.3E-33 T 06-07-2017 IPR001623 DnaJ domain AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 PRINTS PR00625 DnaJ domain signature 42 62 2.3E-33 T 06-07-2017 IPR001623 DnaJ domain AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 PRINTS PR00625 DnaJ domain signature 7 25 2.3E-33 T 06-07-2017 IPR001623 DnaJ domain AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 SUPERFAMILY SSF49493 113 137 5.89E-21 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 SUPERFAMILY SSF49493 185 266 5.89E-21 T 06-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 SUPERFAMILY SSF57938 133 209 1.44E-23 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 Pfam PF00226 DnaJ domain 5 67 9.9E-29 T 06-07-2017 IPR001623 DnaJ domain AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 SUPERFAMILY SSF46565 1 107 1.31E-36 T 06-07-2017 IPR001623 DnaJ domain AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 SMART SM00271 4 62 3.9E-32 T 06-07-2017 IPR001623 DnaJ domain AM402_RS19360 02149dbe85eb3f9d8c73cb1a4d41dd9b 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 2.6E-143 T 06-07-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM402_RS02160 db8cfee4908c8211a012828cdc91374d 95 Pfam PF10840 Protein of unknown function (DUF2645) 7 95 2.4E-27 T 06-07-2017 IPR022553 Protein of unknown function DUF2645 AM402_RS13070 5c03f165ca83d4fb2f296b9efa7e72b9 324 Pfam PF08003 Protein of unknown function (DUF1698) 7 323 6.6E-166 T 06-07-2017 IPR027555 tRNA (mo5U34)-methyltransferase-like AM402_RS13070 5c03f165ca83d4fb2f296b9efa7e72b9 324 Gene3D G3DSA:3.40.50.150 92 313 9.0E-28 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS13070 5c03f165ca83d4fb2f296b9efa7e72b9 324 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 323 53.554 T 06-07-2017 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM402_RS13070 5c03f165ca83d4fb2f296b9efa7e72b9 324 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 322 8.4E-147 T 06-07-2017 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM402_RS13070 5c03f165ca83d4fb2f296b9efa7e72b9 324 SUPERFAMILY SSF53335 92 324 2.24E-34 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS10640 ea41e866146783fc0a746e23308c074a 245 SUPERFAMILY SSF52317 2 243 3.09E-70 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS10640 ea41e866146783fc0a746e23308c074a 245 Pfam PF07090 Putative glutamine amidotransferase 2 244 1.5E-111 T 06-07-2017 IPR010768 Putative glutamine amidotransferase AM402_RS10640 ea41e866146783fc0a746e23308c074a 245 Gene3D G3DSA:3.40.50.880 2 245 2.5E-91 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS10640 ea41e866146783fc0a746e23308c074a 245 PIRSF PIRSF034405 1 245 1.7E-125 T 06-07-2017 IPR017027 Uncharacterised conserved protein UCP034405 AM402_RS05660 4b6392e55fa1842612c0881b38ba4473 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 10 205 2.2E-80 T 06-07-2017 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 AM402_RS05660 4b6392e55fa1842612c0881b38ba4473 210 SUPERFAMILY SSF101473 2 207 3.27E-59 T 06-07-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM402_RS05660 4b6392e55fa1842612c0881b38ba4473 210 Pfam PF02734 DAK2 domain 32 205 5.5E-56 T 06-07-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM402_RS05660 4b6392e55fa1842612c0881b38ba4473 210 SMART SM01120 32 206 7.8E-80 T 06-07-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.91 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.4E-64 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 PIRSF PIRSF004749 1 171 1.3E-55 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 Gene3D G3DSA:3.90.45.10 5 166 3.1E-62 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 Pfam PF01327 Polypeptide deformylase 4 152 2.0E-49 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 SUPERFAMILY SSF56420 1 161 2.62E-61 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 PRINTS PR01576 Peptide deformylase signature 33 62 1.6E-37 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 PRINTS PR01576 Peptide deformylase signature 120 149 1.6E-37 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 PRINTS PR01576 Peptide deformylase signature 101 119 1.6E-37 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS00840 5eac5029814578d6d3ebbda7cba64321 171 PRINTS PR01576 Peptide deformylase signature 89 100 1.6E-37 T 06-07-2017 IPR023635 Peptide deformylase AM402_RS10585 5c88bca077b39b47cb31e80d6db3e1f0 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 249 8.8E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10585 5c88bca077b39b47cb31e80d6db3e1f0 258 SUPERFAMILY SSF161098 4 252 1.53E-48 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10585 5c88bca077b39b47cb31e80d6db3e1f0 258 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 23 244 3.6E-70 T 06-07-2017 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0006810|GO:0016020 AM402_RS10585 5c88bca077b39b47cb31e80d6db3e1f0 258 Gene3D G3DSA:1.10.3720.10 6 254 1.7E-42 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS08050 9ee9776875b523c9ee8784d63248fbb6 228 Pfam PF04519 Polymer-forming cytoskeletal 91 187 8.3E-20 T 06-07-2017 IPR007607 Protein of unknown function DUF583 AM402_RS01450 695d3c66c87c13f9a0be71db5dbdc50b 222 Pfam PF05944 Phage small terminase subunit 36 164 1.8E-44 T 06-07-2017 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 SUPERFAMILY SSF101801 53 134 7.85E-27 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 Gene3D G3DSA:2.30.330.10 51 135 1.5E-38 T 06-07-2017 AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 55 125 1.6E-25 T 06-07-2017 IPR001543 Surface presentation of antigen (SpoA) AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 44 2.5E-12 T 06-07-2017 IPR031576 Flagellar motor switch protein FliN, N-terminal AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 72 88 4.0E-30 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 101 116 4.0E-30 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 88 101 4.0E-30 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 55 71 4.0E-30 T 06-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM402_RS09770 9c5a09e3aaa52d4e80a447df93e8e8bc 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 127 2.3E-33 T 06-07-2017 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM402_RS11900 6b38c71ccb0e058979dc9de9f9172dec 306 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 5 265 57.844 T 06-07-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 AM402_RS11900 6b38c71ccb0e058979dc9de9f9172dec 306 SUPERFAMILY SSF52402 23 251 2.48E-56 T 06-07-2017 AM402_RS11900 6b38c71ccb0e058979dc9de9f9172dec 306 Gene3D G3DSA:3.40.50.620 18 202 3.5E-21 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS11900 6b38c71ccb0e058979dc9de9f9172dec 306 Pfam PF01171 PP-loop family 36 200 3.0E-16 T 06-07-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM402_RS11900 6b38c71ccb0e058979dc9de9f9172dec 306 PIRSF PIRSF004976 2 269 1.1E-76 T 06-07-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 3.8E-40 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 Hamap MF_00367 GTPase Era [era]. 6 297 35.794 T 06-07-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 9.5E-6 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 9.5E-6 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 Pfam PF01926 50S ribosome-binding GTPase 11 125 8.2E-23 T 06-07-2017 IPR006073 GTP binding domain GO:0005525 AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 Pfam PF07650 KH domain 209 285 4.1E-20 T 06-07-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 SUPERFAMILY SSF52540 11 205 7.1E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 Gene3D G3DSA:3.40.50.300 4 175 2.0E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 SUPERFAMILY SSF54814 182 297 1.93E-42 T 06-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 Gene3D G3DSA:3.30.300.20 190 294 4.2E-41 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta AM402_RS08420 3ccb15df14ffcbeab2a73017034d26a9 302 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 4.9E-116 T 06-07-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AM402_RS15305 5502bc26afb8d4ceba0b75a987393f6a 216 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 36 216 5.2E-61 T 06-07-2017 IPR017738 Type VI secretion system-associated, VCA0118 AM402_RS15305 5502bc26afb8d4ceba0b75a987393f6a 216 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 35 216 1.1E-56 T 06-07-2017 IPR017738 Type VI secretion system-associated, VCA0118 AM402_RS15275 ccda87018f2910289b9e1f13169dc67b 422 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 9 416 4.7E-106 T 06-07-2017 IPR017735 Type VI secretion system, FHA domain-containing protein AM402_RS15275 ccda87018f2910289b9e1f13169dc67b 422 Gene3D G3DSA:2.60.200.20 27 102 3.2E-7 T 06-07-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AM402_RS15275 ccda87018f2910289b9e1f13169dc67b 422 SUPERFAMILY SSF49879 27 103 2.49E-7 T 06-07-2017 IPR008984 SMAD/FHA domain GO:0005515 AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 SUPERFAMILY SSF53613 11 310 3.59E-60 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 Gene3D G3DSA:3.40.50.620 340 461 7.1E-37 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 4.7E-64 T 06-07-2017 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 2.2E-18 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 1.0E-130 T 06-07-2017 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.954 T 06-07-2017 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 SUPERFAMILY SSF52374 341 471 1.97E-23 T 06-07-2017 AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 Pfam PF00294 pfkB family carbohydrate kinase 11 305 5.2E-55 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 Pfam PF01467 Cytidylyltransferase-like 345 469 8.4E-17 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS05895 85241e0562de498d268c050f1827a9bc 474 Gene3D G3DSA:3.40.1190.20 13 313 2.8E-67 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS11890 2d5f6aff58ec3af4a85f0285ffe7a427 110 Pfam PF14302 Domain of unknown function (DUF4377) 36 109 3.3E-27 T 06-07-2017 IPR025485 Domain of unknown function DUF4377 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 SUPERFAMILY SSF51120 354 489 1.11E-27 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Pfam PF08548 Peptidase M10 serralysin C terminal 355 646 3.9E-42 T 06-07-2017 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 PRINTS PR00313 NodO calcium binding signature 553 562 3.1E-11 T 06-07-2017 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 PRINTS PR00313 NodO calcium binding signature 454 465 3.1E-11 T 06-07-2017 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 PRINTS PR00313 NodO calcium binding signature 466 474 3.1E-11 T 06-07-2017 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 PRINTS PR00313 NodO calcium binding signature 475 483 3.1E-11 T 06-07-2017 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Gene3D G3DSA:3.40.390.10 278 355 4.6E-22 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Gene3D G3DSA:3.40.390.10 122 231 4.6E-22 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Gene3D G3DSA:2.150.10.10 475 630 4.0E-23 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Gene3D G3DSA:2.150.10.10 369 474 1.7E-17 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 SUPERFAMILY SSF55486 128 226 1.19E-23 T 06-07-2017 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 SUPERFAMILY SSF55486 280 352 1.19E-23 T 06-07-2017 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 SUPERFAMILY SSF51120 483 630 2.72E-19 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 526 542 0.4 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 474 491 3.6E-4 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 552 559 25.0 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 505 518 4.5 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 456 472 0.0073 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS18075 8cdc7fd3057942b55204b1bde8566aac 654 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 438 454 1.0 T 06-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AM402_RS15035 d8fc295bc09fda8f82c7635393aca87a 155 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 5.0E-58 T 06-07-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM402_RS15035 d8fc295bc09fda8f82c7635393aca87a 155 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.858 T 06-07-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM402_RS15035 d8fc295bc09fda8f82c7635393aca87a 155 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 4.3E-74 T 06-07-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM402_RS12910 7b2e65e954d4345795e2178a0bbfd4de 147 PIRSF PIRSF006173 1 144 6.7E-66 T 06-07-2017 IPR008228 Uncharacterised conserved protein UCP006173 AM402_RS12910 7b2e65e954d4345795e2178a0bbfd4de 147 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 5.2E-8 T 06-07-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein AM402_RS12910 7b2e65e954d4345795e2178a0bbfd4de 147 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 40.821 T 06-07-2017 IPR008228 Uncharacterised conserved protein UCP006173 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 SUPERFAMILY SSF63737 7 193 6.8E-48 T 06-07-2017 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 Gene3D G3DSA:1.25.50.10 547 870 8.0E-123 T 06-07-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 Gene3D G3DSA:1.10.390.10 308 451 3.5E-34 T 06-07-2017 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 6.0E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 6.0E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 6.0E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 6.0E-8 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 SUPERFAMILY SSF55486 204 450 4.03E-75 T 06-07-2017 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 06-07-2017 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 4.0E-135 T 06-07-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM402_RS15105 9111e4ec6ff10a0d00699def824b3adc 871 Pfam PF01433 Peptidase family M1 22 384 2.5E-72 T 06-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM402_RS01850 49adc8bbf588b7132c3ad83483c9fd1c 299 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 06-07-2017 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AM402_RS01850 49adc8bbf588b7132c3ad83483c9fd1c 299 SUPERFAMILY SSF53697 7 251 8.45E-77 T 06-07-2017 AM402_RS01850 49adc8bbf588b7132c3ad83483c9fd1c 299 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.75 T 06-07-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AM402_RS01850 49adc8bbf588b7132c3ad83483c9fd1c 299 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 3.9E-134 T 06-07-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AM402_RS01850 49adc8bbf588b7132c3ad83483c9fd1c 299 Gene3D G3DSA:3.40.50.10490 6 251 1.1E-91 T 06-07-2017 AM402_RS01850 49adc8bbf588b7132c3ad83483c9fd1c 299 Pfam PF01380 SIS domain 129 211 4.6E-10 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS00675 47d4b8d381ac22b9a223597a4a549093 352 Pfam PF02706 Chain length determinant protein 16 238 1.3E-10 T 06-07-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AM402_RS00675 47d4b8d381ac22b9a223597a4a549093 352 SUPERFAMILY SSF160355 55 320 4.32E-75 T 06-07-2017 AM402_RS00675 47d4b8d381ac22b9a223597a4a549093 352 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 9 349 56.109 T 06-07-2017 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 AM402_RS00675 47d4b8d381ac22b9a223597a4a549093 352 Gene3D G3DSA:3.30.1890.10 55 223 1.2E-76 T 06-07-2017 AM402_RS00675 47d4b8d381ac22b9a223597a4a549093 352 Gene3D G3DSA:3.30.1890.10 259 320 1.2E-76 T 06-07-2017 AM402_RS08990 ba989a1fa22b1e5ca9661adc5154313a 212 SUPERFAMILY SSF110997 133 209 1.57E-13 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS08990 ba989a1fa22b1e5ca9661adc5154313a 212 Hamap MF_02022 Cell division protein DedD [dedD]. 10 212 22.896 T 06-07-2017 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 AM402_RS08990 ba989a1fa22b1e5ca9661adc5154313a 212 Pfam PF05036 Sporulation related domain 134 208 8.2E-11 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS08990 ba989a1fa22b1e5ca9661adc5154313a 212 Gene3D G3DSA:3.30.70.1070 132 209 1.3E-14 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS21290 1c11ab29bd7a3e10e1717c4ebce1591b 177 SUPERFAMILY SSF52266 6 172 4.21E-15 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS21290 1c11ab29bd7a3e10e1717c4ebce1591b 177 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 11 168 1.0E-7 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS21290 1c11ab29bd7a3e10e1717c4ebce1591b 177 Gene3D G3DSA:3.40.50.1110 10 173 1.9E-12 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 SUPERFAMILY SSF47807 171 291 3.14E-32 T 06-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Pfam PF01612 3'-5' exonuclease 333 520 5.1E-40 T 06-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Gene3D G3DSA:1.20.1060.10 546 665 1.5E-39 T 06-07-2017 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 TIGRFAM TIGR00593 pola: DNA polymerase I 10 932 1.7E-296 T 06-07-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 SUPERFAMILY SSF56672 526 932 3.45E-162 T 06-07-2017 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Gene3D G3DSA:1.10.150.20 187 253 2.1E-25 T 06-07-2017 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.4E-56 T 06-07-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 5.6E-30 T 06-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Gene3D G3DSA:3.30.70.370 666 714 2.9E-67 T 06-07-2017 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Gene3D G3DSA:3.30.70.370 822 932 2.9E-67 T 06-07-2017 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 SUPERFAMILY SSF88723 7 170 4.17E-59 T 06-07-2017 IPR029060 PIN domain-like AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 1.8E-79 T 06-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 SMART SM00474 333 520 3.6E-39 T 06-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Gene3D G3DSA:1.10.150.20 715 821 5.7E-38 T 06-07-2017 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Pfam PF00476 DNA polymerase family A 554 930 3.1E-158 T 06-07-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 SUPERFAMILY SSF53098 329 520 4.66E-55 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 06-07-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 SMART SM00482 689 896 6.8E-117 T 06-07-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Gene3D G3DSA:3.30.420.10 331 545 2.8E-84 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 Gene3D G3DSA:3.40.50.1010 8 186 1.2E-74 T 06-07-2017 IPR029060 PIN domain-like AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 SMART SM00279 173 208 7.5E-14 T 06-07-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM402_RS03485 620cb4893fe5089ac213e5a9b6a3e9f7 932 SMART SM00475 7 268 1.3E-137 T 06-07-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM402_RS13245 f77715062f489d84400e4c7d8011a73f 336 SUPERFAMILY SSF49401 202 333 7.95E-9 T 06-07-2017 IPR008966 Adhesion domain AM402_RS13245 f77715062f489d84400e4c7d8011a73f 336 Gene3D G3DSA:2.60.40.1090 202 334 2.6E-5 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS17105 384827507cdb520204032c5a0b44130c 526 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 526 220.231 T 06-07-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM402_RS17105 384827507cdb520204032c5a0b44130c 526 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 514 2.8E-236 T 06-07-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM402_RS17105 384827507cdb520204032c5a0b44130c 526 Pfam PF04262 Glutamate-cysteine ligase 10 380 8.2E-172 T 06-07-2017 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM402_RS17105 384827507cdb520204032c5a0b44130c 526 SUPERFAMILY SSF55931 4 514 5.62E-203 T 06-07-2017 AM402_RS06475 24e78abd9ff8eadf2b581fb36ce76fa6 204 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 201 36.168 T 06-07-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM402_RS06475 24e78abd9ff8eadf2b581fb36ce76fa6 204 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 9 196 8.9E-82 T 06-07-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM402_RS06475 24e78abd9ff8eadf2b581fb36ce76fa6 204 SUPERFAMILY SSF52540 23 199 2.66E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06475 24e78abd9ff8eadf2b581fb36ce76fa6 204 Pfam PF01583 Adenylylsulphate kinase 26 181 2.9E-70 T 06-07-2017 AM402_RS06475 24e78abd9ff8eadf2b581fb36ce76fa6 204 Gene3D G3DSA:3.40.50.300 5 202 3.0E-85 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13230 e0338564f800e7b0dfc025a12d29ee9e 178 Gene3D G3DSA:2.60.40.1090 42 177 8.2E-6 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS13230 e0338564f800e7b0dfc025a12d29ee9e 178 SUPERFAMILY SSF49401 42 177 6.46E-10 T 06-07-2017 IPR008966 Adhesion domain AM402_RS13230 e0338564f800e7b0dfc025a12d29ee9e 178 Pfam PF00419 Fimbrial protein 37 177 7.4E-10 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS02135 b0da7f84bc139663852b4cc761e5c78c 367 Pfam PF00529 HlyD membrane-fusion protein of T1SS 106 353 2.5E-11 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS02135 b0da7f84bc139663852b4cc761e5c78c 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 302 2.5E-16 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS02135 b0da7f84bc139663852b4cc761e5c78c 367 SUPERFAMILY SSF111369 167 297 9.15E-11 T 06-07-2017 AM402_RS02135 b0da7f84bc139663852b4cc761e5c78c 367 Gene3D G3DSA:2.40.50.100 63 92 4.8E-12 T 06-07-2017 AM402_RS02135 b0da7f84bc139663852b4cc761e5c78c 367 Gene3D G3DSA:2.40.50.100 223 256 4.8E-12 T 06-07-2017 AM402_RS14875 eee371d53eb08383043e3e4c0a1a2cc7 392 SUPERFAMILY SSF56349 90 377 7.65E-33 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS14875 eee371d53eb08383043e3e4c0a1a2cc7 392 Pfam PF00589 Phage integrase family 250 378 2.0E-5 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS14875 eee371d53eb08383043e3e4c0a1a2cc7 392 Gene3D G3DSA:1.10.150.130 89 176 1.6E-10 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS14875 eee371d53eb08383043e3e4c0a1a2cc7 392 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 91 163 6.7E-6 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS14875 eee371d53eb08383043e3e4c0a1a2cc7 392 Gene3D G3DSA:1.10.443.10 184 380 2.0E-30 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS14875 eee371d53eb08383043e3e4c0a1a2cc7 392 Gene3D G3DSA:3.30.160.60 3 57 2.7E-7 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AM402_RS00915 f947c0ca8213c665e95f0934a0aa5f4a 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 1.4E-20 T 06-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM402_RS00915 f947c0ca8213c665e95f0934a0aa5f4a 59 Gene3D G3DSA:3.30.1390.20 2 59 2.4E-30 T 06-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM402_RS00915 f947c0ca8213c665e95f0934a0aa5f4a 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.6E-26 T 06-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM402_RS00915 f947c0ca8213c665e95f0934a0aa5f4a 59 PIRSF PIRSF002211 1 59 5.9E-29 T 06-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM402_RS00915 f947c0ca8213c665e95f0934a0aa5f4a 59 SUPERFAMILY SSF55129 3 59 4.32E-22 T 06-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM402_RS00915 f947c0ca8213c665e95f0934a0aa5f4a 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.311 T 06-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM402_RS00915 f947c0ca8213c665e95f0934a0aa5f4a 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 06-07-2017 IPR018038 Ribosomal protein L30, conserved site AM402_RS01540 add361b363b5c4cf9b23bb02ef32fc91 90 Pfam PF10743 Regulatory phage protein cox 9 90 2.5E-30 T 06-07-2017 IPR019679 Bacteriophage P2, regulatory protein Cox AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 Gene3D G3DSA:3.40.50.300 30 252 1.1E-29 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 Gene3D G3DSA:3.40.50.300 352 512 1.6E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 SUPERFAMILY SSF52540 352 512 1.65E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 SMART SM00382 28 212 0.019 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 SMART SM00382 357 520 2.3E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 SUPERFAMILY SSF52540 11 219 1.17E-32 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 Pfam PF00005 ABC transporter 351 478 2.3E-14 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS13075 5c902bf47e0266f253d520ec0e392015 520 Pfam PF00005 ABC transporter 30 167 2.1E-15 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS03535 faefa2a83035fe8117a616547be31765 326 PIRSF PIRSF005211 1 326 6.7E-109 T 06-07-2017 IPR012020 AB hydrolase 4 family AM402_RS03535 faefa2a83035fe8117a616547be31765 326 SUPERFAMILY SSF53474 6 323 1.52E-36 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS03535 faefa2a83035fe8117a616547be31765 326 Gene3D G3DSA:3.40.50.1820 42 171 3.5E-28 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS03535 faefa2a83035fe8117a616547be31765 326 Gene3D G3DSA:3.40.50.1820 247 323 3.5E-28 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS03535 faefa2a83035fe8117a616547be31765 326 Pfam PF00561 alpha/beta hydrolase fold 60 298 6.6E-19 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AM402_RS08590 8f9ba305fbba44e4ec7e3b6c4114b676 111 PRINTS PR00355 Adrenodoxin signature 83 91 3.5E-10 T 06-07-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM402_RS08590 8f9ba305fbba44e4ec7e3b6c4114b676 111 PRINTS PR00355 Adrenodoxin signature 42 52 3.5E-10 T 06-07-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM402_RS08590 8f9ba305fbba44e4ec7e3b6c4114b676 111 PRINTS PR00355 Adrenodoxin signature 60 74 3.5E-10 T 06-07-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM402_RS08590 8f9ba305fbba44e4ec7e3b6c4114b676 111 SUPERFAMILY SSF54292 4 109 1.39E-35 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS08590 8f9ba305fbba44e4ec7e3b6c4114b676 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 7.0E-62 T 06-07-2017 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AM402_RS08590 8f9ba305fbba44e4ec7e3b6c4114b676 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 92 2.6E-16 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS08590 8f9ba305fbba44e4ec7e3b6c4114b676 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 06-07-2017 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM402_RS08590 8f9ba305fbba44e4ec7e3b6c4114b676 111 Gene3D G3DSA:3.10.20.30 5 108 3.7E-36 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 248 539 1.7E-76 T 06-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 SMART SM00797 268 543 7.3E-109 T 06-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 Pfam PF02682 Allophanate hydrolase subunit 1 20 209 1.6E-62 T 06-07-2017 IPR003833 Carboxyltransferase domain, subdomain C and D AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 SUPERFAMILY SSF160467 20 102 7.06E-11 T 06-07-2017 AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 Gene3D G3DSA:2.40.100.10 425 538 2.4E-12 T 06-07-2017 IPR029000 Cyclophilin-like domain AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 Gene3D G3DSA:2.40.100.10 99 223 2.5E-47 T 06-07-2017 IPR029000 Cyclophilin-like domain AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 Pfam PF02626 Allophanate hydrolase subunit 2 269 535 1.2E-79 T 06-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 SUPERFAMILY SSF50891 99 221 1.06E-39 T 06-07-2017 IPR029000 Cyclophilin-like domain AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 SMART SM00796 19 209 6.9E-82 T 06-07-2017 IPR003833 Carboxyltransferase domain, subdomain C and D AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 Gene3D G3DSA:3.30.1360.40 32 86 5.4E-10 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain AM402_RS20210 3c4823d53d1b92c62b54b311f6e03337 543 SUPERFAMILY SSF50891 425 539 5.31E-16 T 06-07-2017 IPR029000 Cyclophilin-like domain AM402_RS13165 4603761760edaaef5ac33414dd113df7 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.374 T 06-07-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM402_RS13165 4603761760edaaef5ac33414dd113df7 284 SUPERFAMILY SSF51569 3 278 1.19E-102 T 06-07-2017 AM402_RS13165 4603761760edaaef5ac33414dd113df7 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.1E-117 T 06-07-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM402_RS13165 4603761760edaaef5ac33414dd113df7 284 Gene3D G3DSA:3.20.20.70 18 281 4.9E-107 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS13165 4603761760edaaef5ac33414dd113df7 284 Pfam PF00793 DAHP synthetase I family 10 274 1.9E-66 T 06-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM402_RS21360 6d19e405811cddaffe75095dfd2992e7 142 SUPERFAMILY SSF88723 1 137 7.85E-27 T 06-07-2017 IPR029060 PIN domain-like AM402_RS21360 6d19e405811cddaffe75095dfd2992e7 142 Gene3D G3DSA:3.40.50.1010 1 126 1.5E-18 T 06-07-2017 IPR029060 PIN domain-like AM402_RS21360 6d19e405811cddaffe75095dfd2992e7 142 Pfam PF01850 PIN domain 3 126 9.0E-12 T 06-07-2017 IPR002716 PIN domain AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 7.8E-25 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 06-07-2017 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00345 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 8 74 1.1E-32 T 06-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS19605 b3feac15dbdec54bca05b6096900da13 293 SUPERFAMILY SSF46689 219 270 1.16E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS19605 b3feac15dbdec54bca05b6096900da13 293 Gene3D G3DSA:1.10.10.60 219 271 2.3E-15 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS19605 b3feac15dbdec54bca05b6096900da13 293 SMART SM00342 184 266 3.8E-31 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS19605 b3feac15dbdec54bca05b6096900da13 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 262 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS19605 b3feac15dbdec54bca05b6096900da13 293 Pfam PF12833 Helix-turn-helix domain 191 267 2.5E-15 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS19605 b3feac15dbdec54bca05b6096900da13 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 2.5E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS19605 b3feac15dbdec54bca05b6096900da13 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 2.5E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 4.7E-110 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 Gene3D G3DSA:3.40.1380.10 63 191 1.7E-42 T 06-07-2017 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 Gene3D G3DSA:1.10.287.80 202 235 3.0E-40 T 06-07-2017 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 Gene3D G3DSA:1.10.287.80 19 60 3.0E-40 T 06-07-2017 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.547 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 Gene3D G3DSA:1.10.287.80 236 282 7.4E-30 T 06-07-2017 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.6E-37 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.6E-37 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.6E-37 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.6E-37 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 Pfam PF00231 ATP synthase 5 286 3.6E-91 T 06-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 06-07-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 AM402_RS02290 c4b0da2b8b0068b372df7e826b94ffb7 287 SUPERFAMILY SSF52943 2 287 5.49E-96 T 06-07-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 Gene3D G3DSA:3.40.1500.10 6 302 2.4E-138 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 SUPERFAMILY SSF102886 6 302 7.32E-140 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 06-07-2017 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.714 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 PIRSF PIRSF000166 3 302 1.4E-131 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 Pfam PF01218 Coproporphyrinogen III oxidase 8 302 1.4E-133 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 PRINTS PR00073 Coprogen oxidase signature 90 114 4.9E-85 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 PRINTS PR00073 Coprogen oxidase signature 262 288 4.9E-85 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 PRINTS PR00073 Coprogen oxidase signature 162 191 4.9E-85 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 PRINTS PR00073 Coprogen oxidase signature 125 147 4.9E-85 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 PRINTS PR00073 Coprogen oxidase signature 48 69 4.9E-85 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 PRINTS PR00073 Coprogen oxidase signature 31 47 4.9E-85 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS08670 e80f2f7bcd1e24327e8ff600eb306f6a 302 PRINTS PR00073 Coprogen oxidase signature 234 261 4.9E-85 T 06-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS20620 1dccbaafe04deaad92813472836d4f1e 177 Pfam PF02036 SCP-2 sterol transfer family 42 133 2.7E-18 T 06-07-2017 IPR003033 SCP2 sterol-binding domain AM402_RS20620 1dccbaafe04deaad92813472836d4f1e 177 SUPERFAMILY SSF55718 36 136 1.79E-20 T 06-07-2017 IPR003033 SCP2 sterol-binding domain AM402_RS20620 1dccbaafe04deaad92813472836d4f1e 177 Gene3D G3DSA:3.30.1050.10 59 135 1.1E-11 T 06-07-2017 IPR003033 SCP2 sterol-binding domain AM402_RS20620 1dccbaafe04deaad92813472836d4f1e 177 PIRSF PIRSF025550 1 173 1.7E-77 T 06-07-2017 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AM402_RS03310 09ffcd8bb5d0e11ecf3db3ec71b2d4ae 428 Gene3D G3DSA:2.120.10.30 248 418 1.8E-27 T 06-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AM402_RS03310 09ffcd8bb5d0e11ecf3db3ec71b2d4ae 428 Gene3D G3DSA:2.120.10.30 5 153 1.8E-27 T 06-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AM402_RS03310 09ffcd8bb5d0e11ecf3db3ec71b2d4ae 428 Pfam PF07676 WD40-like Beta Propeller Repeat 400 423 0.057 T 06-07-2017 IPR011659 WD40-like Beta Propeller AM402_RS03310 09ffcd8bb5d0e11ecf3db3ec71b2d4ae 428 SUPERFAMILY SSF69304 22 155 4.97E-16 T 06-07-2017 AM402_RS03310 09ffcd8bb5d0e11ecf3db3ec71b2d4ae 428 SUPERFAMILY SSF69304 284 422 4.97E-16 T 06-07-2017 AM402_RS03310 09ffcd8bb5d0e11ecf3db3ec71b2d4ae 428 Pfam PF12566 Protein of unknown function (DUF3748) 67 187 4.9E-56 T 06-07-2017 IPR022223 Protein of unknown function DUF3748 AM402_RS10140 9a1114a8a6996cc4115de0e807d9a0de 433 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 06-07-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM402_RS10140 9a1114a8a6996cc4115de0e807d9a0de 433 Pfam PF00860 Permease family 16 381 6.5E-102 T 06-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS10140 9a1114a8a6996cc4115de0e807d9a0de 433 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 5.7E-123 T 06-07-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM402_RS16095 1a722083d6db90aa7924d89ea1a09f3f 165 PRINTS PR01021 OMPA domain signature 110 126 1.1E-17 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM402_RS16095 1a722083d6db90aa7924d89ea1a09f3f 165 PRINTS PR01021 OMPA domain signature 95 110 1.1E-17 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM402_RS16095 1a722083d6db90aa7924d89ea1a09f3f 165 PRINTS PR01021 OMPA domain signature 65 87 1.1E-17 T 06-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM402_RS16095 1a722083d6db90aa7924d89ea1a09f3f 165 SUPERFAMILY SSF103088 52 164 9.03E-35 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS16095 1a722083d6db90aa7924d89ea1a09f3f 165 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 63 165 8.2E-47 T 06-07-2017 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AM402_RS16095 1a722083d6db90aa7924d89ea1a09f3f 165 ProSitePatterns PS01068 OmpA-like domain. 97 141 - T 06-07-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM402_RS16095 1a722083d6db90aa7924d89ea1a09f3f 165 Pfam PF00691 OmpA family 64 159 3.2E-22 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS16095 1a722083d6db90aa7924d89ea1a09f3f 165 Gene3D G3DSA:3.30.1330.60 62 164 8.8E-35 T 06-07-2017 IPR006665 OmpA-like domain AM402_RS04435 6f0615f28a7a8f378fef2b6df0ddfe31 428 SUPERFAMILY SSF51905 3 183 1.3E-44 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS04435 6f0615f28a7a8f378fef2b6df0ddfe31 428 SUPERFAMILY SSF51905 283 405 1.3E-44 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS04435 6f0615f28a7a8f378fef2b6df0ddfe31 428 SUPERFAMILY SSF54373 181 283 1.37E-21 T 06-07-2017 AM402_RS04435 6f0615f28a7a8f378fef2b6df0ddfe31 428 Gene3D G3DSA:3.50.50.60 6 246 6.5E-40 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS04435 6f0615f28a7a8f378fef2b6df0ddfe31 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.7E-6 T 06-07-2017 AM402_RS04435 6f0615f28a7a8f378fef2b6df0ddfe31 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 1.7E-6 T 06-07-2017 AM402_RS04435 6f0615f28a7a8f378fef2b6df0ddfe31 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 1.7E-6 T 06-07-2017 AM402_RS04435 6f0615f28a7a8f378fef2b6df0ddfe31 428 Pfam PF03486 HI0933-like protein 7 177 5.4E-13 T 06-07-2017 AM402_RS09725 1d34f994ab343d4cdd2e8322d2c0f516 247 Pfam PF02107 Flagellar L-ring protein 62 246 3.0E-59 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM402_RS09725 1d34f994ab343d4cdd2e8322d2c0f516 247 Hamap MF_00415 Flagellar L-ring protein [flgH]. 19 245 26.49 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM402_RS09725 1d34f994ab343d4cdd2e8322d2c0f516 247 PRINTS PR01008 Flagellar L-ring protein signature 161 176 1.3E-34 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM402_RS09725 1d34f994ab343d4cdd2e8322d2c0f516 247 PRINTS PR01008 Flagellar L-ring protein signature 187 203 1.3E-34 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM402_RS09725 1d34f994ab343d4cdd2e8322d2c0f516 247 PRINTS PR01008 Flagellar L-ring protein signature 208 222 1.3E-34 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM402_RS09725 1d34f994ab343d4cdd2e8322d2c0f516 247 PRINTS PR01008 Flagellar L-ring protein signature 88 100 1.3E-34 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM402_RS09725 1d34f994ab343d4cdd2e8322d2c0f516 247 PRINTS PR01008 Flagellar L-ring protein signature 224 238 1.3E-34 T 06-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM402_RS03145 b09c87aef484f89cb7dcb41146a02593 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 53 240 4.1E-17 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03145 b09c87aef484f89cb7dcb41146a02593 245 Gene3D G3DSA:1.10.3720.10 17 239 1.7E-45 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03145 b09c87aef484f89cb7dcb41146a02593 245 SUPERFAMILY SSF161098 18 226 9.29E-40 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03145 b09c87aef484f89cb7dcb41146a02593 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 18 83 2.7E-17 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM402_RS18155 0b839d614c6d08258ba47cd4fe870285 871 Pfam PF13954 PapC N-terminal domain 49 195 7.0E-39 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS18155 0b839d614c6d08258ba47cd4fe870285 871 Pfam PF00577 Outer membrane usher protein 213 762 1.2E-201 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS18155 0b839d614c6d08258ba47cd4fe870285 871 Pfam PF13953 PapC C-terminal domain 773 828 4.4E-14 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS18155 0b839d614c6d08258ba47cd4fe870285 871 SUPERFAMILY SSF141729 47 170 8.37E-29 T 06-07-2017 AM402_RS18155 0b839d614c6d08258ba47cd4fe870285 871 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 328 338 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site AM402_RS08740 08b88e1d72d184c7063e490b739165b4 351 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 216 341 2.1E-48 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AM402_RS08740 08b88e1d72d184c7063e490b739165b4 351 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 6 343 4.1E-78 T 06-07-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 AM402_RS08740 08b88e1d72d184c7063e490b739165b4 351 SUPERFAMILY SSF64383 213 346 3.53E-47 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AM402_RS08740 08b88e1d72d184c7063e490b739165b4 351 Hamap MF_00509 Cell division protein ZipA [zipA]. 4 345 24.218 T 06-07-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 AM402_RS08740 08b88e1d72d184c7063e490b739165b4 351 SMART SM00771 213 343 6.4E-72 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AM402_RS08740 08b88e1d72d184c7063e490b739165b4 351 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 216 344 2.0E-58 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AM402_RS08740 08b88e1d72d184c7063e490b739165b4 351 Gene3D G3DSA:3.30.1400.10 212 345 9.2E-58 T 06-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 Pfam PF03466 LysR substrate binding domain 89 288 2.2E-42 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-5 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-5 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-5 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 Gene3D G3DSA:1.10.10.10 1 85 8.6E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 SUPERFAMILY SSF46785 2 109 4.99E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 Gene3D G3DSA:3.40.190.10 90 179 5.0E-17 T 06-07-2017 AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.1E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 SUPERFAMILY SSF53850 90 289 8.84E-40 T 06-07-2017 AM402_RS20365 0ea50875107cb24429a45cf83418ca7f 317 Gene3D G3DSA:3.40.190.10 180 258 6.4E-16 T 06-07-2017 AM402_RS16365 82f63859684e6ff8f9b6881f8e878db7 188 SUPERFAMILY SSF54285 1 83 9.72E-6 T 06-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM402_RS16365 82f63859684e6ff8f9b6881f8e878db7 188 Gene3D G3DSA:3.10.20.30 3 81 3.4E-6 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS16365 82f63859684e6ff8f9b6881f8e878db7 188 Pfam PF06805 Bacteriophage lambda tail assembly protein I 8 84 4.8E-9 T 06-07-2017 IPR010654 Bacteriophage lambda tail assembly I AM402_RS11690 82f63859684e6ff8f9b6881f8e878db7 188 SUPERFAMILY SSF54285 1 83 9.72E-6 T 06-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM402_RS11690 82f63859684e6ff8f9b6881f8e878db7 188 Gene3D G3DSA:3.10.20.30 3 81 3.4E-6 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS11690 82f63859684e6ff8f9b6881f8e878db7 188 Pfam PF06805 Bacteriophage lambda tail assembly protein I 8 84 4.8E-9 T 06-07-2017 IPR010654 Bacteriophage lambda tail assembly I AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 Pfam PF01228 Glycine radical 1020 1123 8.7E-25 T 06-07-2017 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 Pfam PF02901 Pyruvate formate lyase-like 105 322 5.6E-46 T 06-07-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 Pfam PF02901 Pyruvate formate lyase-like 355 1003 2.0E-218 T 06-07-2017 IPR004184 Pyruvate formate lyase domain GO:0003824 AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 Gene3D G3DSA:3.20.70.20 349 1140 1.1E-243 T 06-07-2017 AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 Gene3D G3DSA:3.20.70.20 3 323 8.6E-60 T 06-07-2017 AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 Hamap MF_02058 Choline trimethylamine-lyase [cutC]. 350 1142 57.726 T 06-07-2017 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 SUPERFAMILY SSF51998 6 321 6.41E-46 T 06-07-2017 AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 SUPERFAMILY SSF51998 354 1139 1.86E-237 T 06-07-2017 AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 ProSitePatterns PS00850 Glycine radical domain signature. 1112 1120 - T 06-07-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AM402_RS04050 6fc608621cf1ecda6393357a4ee04950 1142 TIGRFAM TIGR04394 choline_CutC: choline trimethylamine-lyase 354 1142 0.0 T 06-07-2017 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 Pfam PF16200 C-terminal region of band_7 237 297 2.6E-7 T 06-07-2017 IPR032435 Band 7, C-terminal extension AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 PRINTS PR00721 Stomatin signature 73 94 9.7E-28 T 06-07-2017 IPR001972 Stomatin family GO:0016020 AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 PRINTS PR00721 Stomatin signature 108 125 9.7E-28 T 06-07-2017 IPR001972 Stomatin family GO:0016020 AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 PRINTS PR00721 Stomatin signature 171 192 9.7E-28 T 06-07-2017 IPR001972 Stomatin family GO:0016020 AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 PRINTS PR00721 Stomatin signature 152 170 9.7E-28 T 06-07-2017 IPR001972 Stomatin family GO:0016020 AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 PRINTS PR00721 Stomatin signature 128 151 9.7E-28 T 06-07-2017 IPR001972 Stomatin family GO:0016020 AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 Pfam PF01145 SPFH domain / Band 7 family 22 191 1.9E-32 T 06-07-2017 IPR001107 Band 7 domain AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 SUPERFAMILY SSF117892 49 183 3.27E-42 T 06-07-2017 IPR001107 Band 7 domain AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 06-07-2017 IPR018080 Band 7/stomatin-like, conserved site AM402_RS06810 2050f400fff52b4eedf523b64b837304 307 SMART SM00244 18 176 8.0E-60 T 06-07-2017 IPR001107 Band 7 domain AM402_RS05725 f1be47476f942d46eff6748dfc181e99 256 PIRSF PIRSF030802 1 256 5.2E-128 T 06-07-2017 IPR024197 Uncharacterised conserved protein UCP030802 AM402_RS05725 f1be47476f942d46eff6748dfc181e99 256 Gene3D G3DSA:3.40.50.1000 5 96 1.2E-8 T 06-07-2017 IPR023214 HAD-like domain AM402_RS05725 f1be47476f942d46eff6748dfc181e99 256 Gene3D G3DSA:3.40.50.1000 188 235 1.2E-8 T 06-07-2017 IPR023214 HAD-like domain AM402_RS05725 f1be47476f942d46eff6748dfc181e99 256 SUPERFAMILY SSF56784 5 235 3.58E-18 T 06-07-2017 IPR023214 HAD-like domain AM402_RS18450 e7e49ac038ebe871926c3e91d7603856 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.695 T 06-07-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM402_RS18450 e7e49ac038ebe871926c3e91d7603856 428 Gene3D G3DSA:3.40.640.10 70 315 2.5E-83 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS18450 e7e49ac038ebe871926c3e91d7603856 428 Pfam PF00202 Aminotransferase class-III 32 392 2.0E-76 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM402_RS18450 e7e49ac038ebe871926c3e91d7603856 428 Gene3D G3DSA:3.90.1150.10 2 69 1.4E-44 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS18450 e7e49ac038ebe871926c3e91d7603856 428 Gene3D G3DSA:3.90.1150.10 319 425 1.4E-44 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS18450 e7e49ac038ebe871926c3e91d7603856 428 SUPERFAMILY SSF53383 2 425 4.5E-135 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS18450 e7e49ac038ebe871926c3e91d7603856 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 2.7E-199 T 06-07-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM402_RS18450 e7e49ac038ebe871926c3e91d7603856 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM402_RS13410 6fa437bec532169b525dd48174421282 115 SUPERFAMILY SSF50249 7 114 1.84E-28 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13410 6fa437bec532169b525dd48174421282 115 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 10 114 6.6E-42 T 06-07-2017 IPR008231 Probable chaperone CsaA AM402_RS13410 6fa437bec532169b525dd48174421282 115 Gene3D G3DSA:2.40.50.140 6 114 2.0E-32 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13410 6fa437bec532169b525dd48174421282 115 Pfam PF01588 Putative tRNA binding domain 18 112 8.3E-14 T 06-07-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM402_RS17205 0d88c65dfbea6ab1627a221b7b4e5998 351 SUPERFAMILY SSF100879 241 349 9.42E-26 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM402_RS17205 0d88c65dfbea6ab1627a221b7b4e5998 351 SUPERFAMILY SSF56672 1 233 2.22E-91 T 06-07-2017 AM402_RS17205 0d88c65dfbea6ab1627a221b7b4e5998 351 Pfam PF00817 impB/mucB/samB family 7 154 1.6E-49 T 06-07-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM402_RS17205 0d88c65dfbea6ab1627a221b7b4e5998 351 Gene3D G3DSA:3.30.70.270 66 164 1.1E-34 T 06-07-2017 AM402_RS17205 0d88c65dfbea6ab1627a221b7b4e5998 351 Gene3D G3DSA:1.10.150.20 165 233 3.0E-23 T 06-07-2017 AM402_RS17205 0d88c65dfbea6ab1627a221b7b4e5998 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 36.815 T 06-07-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM402_RS17205 0d88c65dfbea6ab1627a221b7b4e5998 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 338 1.4E-6 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM402_RS17205 0d88c65dfbea6ab1627a221b7b4e5998 351 Gene3D G3DSA:3.30.1490.100 237 349 6.8E-41 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 Pfam PF00085 Thioredoxin 5 106 1.3E-34 T 06-07-2017 IPR013766 Thioredoxin domain GO:0045454 AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 PRINTS PR00421 Thioredoxin family signature 72 83 4.4E-10 T 06-07-2017 AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 PRINTS PR00421 Thioredoxin family signature 24 32 4.4E-10 T 06-07-2017 AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 PRINTS PR00421 Thioredoxin family signature 32 41 4.4E-10 T 06-07-2017 AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 Gene3D G3DSA:3.40.30.10 2 107 2.1E-41 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 SUPERFAMILY SSF52833 2 107 6.86E-41 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 PIRSF PIRSF000077 2 108 1.1E-44 T 06-07-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM402_RS00690 3845b86f7d9b48a5abfa20d6176df8be 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.2E-39 T 06-07-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM402_RS12535 aa822a777c05b1da5541876231b11eb7 215 PIRSF PIRSF006324 4 215 6.3E-56 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS12535 aa822a777c05b1da5541876231b11eb7 215 Pfam PF01810 LysE type translocator 19 213 3.5E-47 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS13485 ca8a7ce98c9c8b017aba05601516b907 450 Gene3D G3DSA:2.40.160.10 59 318 2.8E-23 T 06-07-2017 IPR023614 Porin domain AM402_RS13485 ca8a7ce98c9c8b017aba05601516b907 450 SUPERFAMILY SSF56935 168 327 1.26E-6 T 06-07-2017 AM402_RS13485 ca8a7ce98c9c8b017aba05601516b907 450 Pfam PF03573 outer membrane porin, OprD family 34 298 3.9E-19 T 06-07-2017 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM402_RS16955 bfce06f7c640c54d5c9ed25413a5db8c 391 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 348 5.7E-11 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS16955 bfce06f7c640c54d5c9ed25413a5db8c 391 Gene3D G3DSA:2.40.50.100 62 95 2.9E-18 T 06-07-2017 AM402_RS16955 bfce06f7c640c54d5c9ed25413a5db8c 391 Gene3D G3DSA:2.40.50.100 216 249 2.9E-18 T 06-07-2017 AM402_RS16955 bfce06f7c640c54d5c9ed25413a5db8c 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 290 5.9E-15 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS16955 bfce06f7c640c54d5c9ed25413a5db8c 391 SUPERFAMILY SSF111369 197 269 1.57E-6 T 06-07-2017 AM402_RS16955 bfce06f7c640c54d5c9ed25413a5db8c 391 SUPERFAMILY SSF111369 139 183 4.45E-7 T 06-07-2017 AM402_RS16955 bfce06f7c640c54d5c9ed25413a5db8c 391 SUPERFAMILY SSF111369 61 110 4.45E-7 T 06-07-2017 AM402_RS16955 bfce06f7c640c54d5c9ed25413a5db8c 391 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 21 346 1.3E-127 T 06-07-2017 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 AM402_RS20660 723014b1bdf31d95293114955ee8e5c7 575 Gene3D G3DSA:3.90.580.10 33 102 1.4E-5 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM402_RS20660 723014b1bdf31d95293114955ee8e5c7 575 Pfam PF08273 Zinc-binding domain of primase-helicase 36 74 1.1E-11 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM402_RS20660 723014b1bdf31d95293114955ee8e5c7 575 Pfam PF13362 Toprim domain 454 551 1.4E-17 T 06-07-2017 IPR006171 Toprim domain AM402_RS20660 723014b1bdf31d95293114955ee8e5c7 575 SUPERFAMILY SSF57783 3 104 8.5E-11 T 06-07-2017 AM402_RS20660 723014b1bdf31d95293114955ee8e5c7 575 SMART SM00778 36 74 3.8E-12 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM402_RS19880 1f25911073509c18a8fc4989678683c6 293 SUPERFAMILY SSF53335 43 291 8.81E-45 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS19880 1f25911073509c18a8fc4989678683c6 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.9E-103 T 06-07-2017 AM402_RS19880 1f25911073509c18a8fc4989678683c6 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 2.4E-119 T 06-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM402_RS19880 1f25911073509c18a8fc4989678683c6 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.017 T 06-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM402_RS19880 1f25911073509c18a8fc4989678683c6 293 Gene3D G3DSA:3.40.50.150 98 286 4.6E-42 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS19880 1f25911073509c18a8fc4989678683c6 293 PIRSF PIRSF000401 1 293 9.4E-96 T 06-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 232 1.1E-95 T 06-07-2017 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Gene3D G3DSA:1.20.120.620 402 506 1.9E-34 T 06-07-2017 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Pfam PF13493 Domain of unknown function (DUF4118) 407 512 5.8E-27 T 06-07-2017 IPR025201 Sensor protein KdpD, transmembrane domain AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 SMART SM00387 779 889 3.5E-31 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 888 1.1E-22 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 SUPERFAMILY SSF47384 664 737 3.14E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Gene3D G3DSA:3.40.50.300 23 231 8.2E-98 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Gene3D G3DSA:3.30.565.10 739 890 2.1E-37 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 SUPERFAMILY SSF55781 514 663 2.8E-10 T 06-07-2017 IPR029016 GAF domain-like AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Pfam PF13492 GAF domain 533 650 8.3E-8 T 06-07-2017 IPR003018 GAF domain GO:0005515 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 SUPERFAMILY SSF52402 254 371 2.85E-5 T 06-07-2017 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 SMART SM00388 669 736 2.2E-14 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Gene3D G3DSA:1.10.287.130 665 732 6.5E-16 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 886 7.9E-9 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 830 7.9E-9 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 7.9E-9 T 06-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 SUPERFAMILY SSF55874 725 891 1.44E-38 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Pfam PF00512 His Kinase A (phospho-acceptor) domain 670 736 8.7E-11 T 06-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Gene3D G3DSA:3.40.50.620 250 370 1.4E-4 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS12635 6fe51e83a2c0d8ef68b61dbbf2b7ef27 900 Gene3D G3DSA:3.30.450.40 510 652 6.3E-5 T 06-07-2017 IPR029016 GAF domain-like AM402_RS17885 b7bbd5658b599d2616eaffcc750e8c31 676 Gene3D G3DSA:3.40.50.300 4 156 3.1E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17885 b7bbd5658b599d2616eaffcc750e8c31 676 Gene3D G3DSA:3.40.50.300 193 364 3.1E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17885 b7bbd5658b599d2616eaffcc750e8c31 676 SUPERFAMILY SSF52540 214 363 1.18E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17885 b7bbd5658b599d2616eaffcc750e8c31 676 SUPERFAMILY SSF52540 4 126 1.18E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17885 b7bbd5658b599d2616eaffcc750e8c31 676 Pfam PF13175 AAA ATPase domain 5 352 9.4E-32 T 06-07-2017 AM402_RS06850 7d7742c12292ccb287d6cdf256890ad5 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 329 1.1E-109 T 06-07-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM402_RS06850 7d7742c12292ccb287d6cdf256890ad5 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.863 T 06-07-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM402_RS06850 7d7742c12292ccb287d6cdf256890ad5 355 SUPERFAMILY SSF56059 79 274 7.6E-57 T 06-07-2017 AM402_RS06850 7d7742c12292ccb287d6cdf256890ad5 355 Pfam PF02222 ATP-grasp domain 88 254 2.2E-53 T 06-07-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM402_RS06850 7d7742c12292ccb287d6cdf256890ad5 355 SUPERFAMILY SSF52440 2 75 7.63E-15 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS06850 7d7742c12292ccb287d6cdf256890ad5 355 SUPERFAMILY SSF51246 279 353 3.22E-20 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS06850 7d7742c12292ccb287d6cdf256890ad5 355 Gene3D G3DSA:3.40.50.20 1 68 8.8E-23 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS06850 7d7742c12292ccb287d6cdf256890ad5 355 Gene3D G3DSA:3.30.470.20 119 352 1.4E-79 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS15815 1e504db693b982ec66aa88ae54c71eb9 296 Pfam PF00892 EamA-like transporter family 150 280 5.8E-19 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS15815 1e504db693b982ec66aa88ae54c71eb9 296 SUPERFAMILY SSF103481 187 280 1.96E-10 T 06-07-2017 AM402_RS15815 1e504db693b982ec66aa88ae54c71eb9 296 SUPERFAMILY SSF103481 48 138 4.18E-6 T 06-07-2017 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Pfam PF00570 HRDC domain 535 601 5.7E-22 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Pfam PF16124 RecQ zinc-binding 343 404 1.8E-16 T 06-07-2017 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 SUPERFAMILY SSF47819 532 606 8.94E-25 T 06-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Gene3D G3DSA:1.10.150.80 532 603 5.9E-22 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Pfam PF00270 DEAD/DEAH box helicase 28 186 2.9E-18 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 SMART SM00490 250 331 2.0E-29 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 SMART SM00956 411 514 6.3E-53 T 06-07-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 SUPERFAMILY SSF52540 208 454 2.66E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 16 463 3.4E-196 T 06-07-2017 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 SUPERFAMILY SSF52540 16 198 3.55E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Pfam PF00271 Helicase conserved C-terminal domain 222 331 5.1E-19 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Gene3D G3DSA:1.10.10.10 345 514 3.0E-61 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 SMART SM00487 22 218 5.5E-31 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 7.9E-259 T 06-07-2017 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Pfam PF09382 RQC domain 406 514 2.8E-37 T 06-07-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Gene3D G3DSA:3.40.50.300 206 344 1.1E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 SMART SM00341 531 607 4.9E-19 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AM402_RS00515 585a278f5f51948f09f94240789c55c3 609 Gene3D G3DSA:3.40.50.300 8 204 1.4E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19190 fffdc9667502207db6b213bd065ed6ef 401 Pfam PF00267 Gram-negative porin 35 133 8.6E-10 T 06-07-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 AM402_RS19190 fffdc9667502207db6b213bd065ed6ef 401 SUPERFAMILY SSF56935 29 401 4.88E-29 T 06-07-2017 AM402_RS19190 fffdc9667502207db6b213bd065ed6ef 401 Gene3D G3DSA:2.40.160.10 29 401 1.9E-40 T 06-07-2017 IPR023614 Porin domain AM402_RS14915 533cb9e56dd8a32a56f732a6573bc36c 308 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 308 44.563 T 06-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM402_RS14915 533cb9e56dd8a32a56f732a6573bc36c 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 299 8.0E-78 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM402_RS14915 533cb9e56dd8a32a56f732a6573bc36c 308 PIRSF PIRSF026649 3 308 1.2E-80 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM402_RS14915 533cb9e56dd8a32a56f732a6573bc36c 308 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 308 7.2E-115 T 06-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM402_RS02060 fbbec16cdba84a64b3617a36ae72d22e 782 PRINTS PR01440 Cellulose synthase subunit B signature 309 330 6.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS02060 fbbec16cdba84a64b3617a36ae72d22e 782 PRINTS PR01440 Cellulose synthase subunit B signature 471 490 6.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS02060 fbbec16cdba84a64b3617a36ae72d22e 782 PRINTS PR01440 Cellulose synthase subunit B signature 556 576 6.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS02060 fbbec16cdba84a64b3617a36ae72d22e 782 PRINTS PR01440 Cellulose synthase subunit B signature 228 251 6.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS02060 fbbec16cdba84a64b3617a36ae72d22e 782 PRINTS PR01440 Cellulose synthase subunit B signature 390 411 6.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS02060 fbbec16cdba84a64b3617a36ae72d22e 782 PRINTS PR01440 Cellulose synthase subunit B signature 519 538 6.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS02060 fbbec16cdba84a64b3617a36ae72d22e 782 PRINTS PR01440 Cellulose synthase subunit B signature 717 737 6.4E-28 T 06-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AM402_RS02060 fbbec16cdba84a64b3617a36ae72d22e 782 Pfam PF03170 Bacterial cellulose synthase subunit 68 677 1.7E-172 T 06-07-2017 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AM402_RS02775 d6251d2f293caad173464a3560803345 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 5.9E-6 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS02775 d6251d2f293caad173464a3560803345 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 5.9E-6 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS02775 d6251d2f293caad173464a3560803345 297 Gene3D G3DSA:3.20.20.70 1 296 1.2E-72 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS02775 d6251d2f293caad173464a3560803345 297 SUPERFAMILY SSF51569 2 296 4.29E-68 T 06-07-2017 AM402_RS02775 d6251d2f293caad173464a3560803345 297 SMART SM01130 3 294 1.0E-57 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS02775 d6251d2f293caad173464a3560803345 297 PIRSF PIRSF001365 1 297 1.5E-61 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS02775 d6251d2f293caad173464a3560803345 297 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 2.4E-43 T 06-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 3.7E-63 T 06-07-2017 AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 SUPERFAMILY SSF51735 6 247 6.33E-79 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.1E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.1E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.1E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 Gene3D G3DSA:3.40.50.720 2 247 8.3E-83 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.5E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.5E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.5E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.5E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.5E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.5E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06330 c324042606c408cd9e945af0b0a5c38f 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS10705 013ef2db555ce00893936a51ff9c85d7 221 Pfam PF06226 Protein of unknown function (DUF1007) 19 220 1.8E-48 T 06-07-2017 IPR010412 Protein of unknown function DUF1007 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 SUPERFAMILY SSF52540 6 219 1.12E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 Gene3D G3DSA:3.40.50.300 3 208 3.9E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.302 T 06-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 SUPERFAMILY SSF50465 298 393 3.17E-36 T 06-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.7E-18 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.7E-14 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 Gene3D G3DSA:2.40.30.10 209 298 2.3E-37 T 06-07-2017 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.2E-59 T 06-07-2017 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 Gene3D G3DSA:2.40.30.10 301 393 4.7E-47 T 06-07-2017 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.2E-33 T 06-07-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.8E-238 T 06-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03645 7e97127a53a6312a2df05b21f79cd36f 394 SUPERFAMILY SSF50447 205 301 1.04E-30 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS19080 e10a1a6d3777256c3325bb3eacfdb5a3 209 Pfam PF12800 4Fe-4S binding domain 68 80 0.24 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS19080 e10a1a6d3777256c3325bb3eacfdb5a3 209 Gene3D G3DSA:3.30.70.20 182 205 3.9E-5 T 06-07-2017 AM402_RS19080 e10a1a6d3777256c3325bb3eacfdb5a3 209 Gene3D G3DSA:3.30.70.20 139 180 2.6E-15 T 06-07-2017 AM402_RS19080 e10a1a6d3777256c3325bb3eacfdb5a3 209 SUPERFAMILY SSF54862 62 205 2.83E-37 T 06-07-2017 AM402_RS19080 e10a1a6d3777256c3325bb3eacfdb5a3 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 157 168 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS19080 e10a1a6d3777256c3325bb3eacfdb5a3 209 Gene3D G3DSA:3.30.70.20 62 138 3.7E-16 T 06-07-2017 AM402_RS19080 e10a1a6d3777256c3325bb3eacfdb5a3 209 Pfam PF13247 4Fe-4S dicluster domain 117 193 2.0E-11 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS19080 e10a1a6d3777256c3325bb3eacfdb5a3 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 184 195 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS00700 2c7b30b1b7051527b8468918a09ad555 502 SUPERFAMILY SSF53067 133 300 3.41E-41 T 06-07-2017 AM402_RS00700 2c7b30b1b7051527b8468918a09ad555 502 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 54.549 T 06-07-2017 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AM402_RS00700 2c7b30b1b7051527b8468918a09ad555 502 Pfam PF02541 Ppx/GppA phosphatase family 22 301 1.7E-92 T 06-07-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM402_RS00700 2c7b30b1b7051527b8468918a09ad555 502 PIRSF PIRSF001267 1 496 2.1E-178 T 06-07-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM402_RS00700 2c7b30b1b7051527b8468918a09ad555 502 SUPERFAMILY SSF109604 307 496 1.73E-41 T 06-07-2017 AM402_RS00700 2c7b30b1b7051527b8468918a09ad555 502 Gene3D G3DSA:3.30.420.40 3 127 3.5E-44 T 06-07-2017 AM402_RS00700 2c7b30b1b7051527b8468918a09ad555 502 Gene3D G3DSA:3.30.420.150 128 300 8.0E-51 T 06-07-2017 AM402_RS00700 2c7b30b1b7051527b8468918a09ad555 502 SUPERFAMILY SSF53067 7 128 1.25E-36 T 06-07-2017 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 4.7E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 4.7E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 4.7E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 4.7E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 123 137 4.7E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 4.7E-54 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 SMART SM01004 5 323 5.4E-204 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 PIRSF PIRSF001415 1 324 6.1E-142 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 Gene3D G3DSA:3.20.20.70 4 321 2.6E-135 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 06-07-2017 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 321 7.5E-134 T 06-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM402_RS11045 99521b160a0e222bcc01f9eaabb153d1 325 SUPERFAMILY SSF51569 7 321 8.64E-128 T 06-07-2017 AM402_RS19590 90a368ed2172595568d8b9ff0f67de1b 108 SUPERFAMILY SSF51278 1 106 1.03E-45 T 06-07-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19590 90a368ed2172595568d8b9ff0f67de1b 108 Gene3D G3DSA:2.10.150.10 1 107 3.4E-50 T 06-07-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19590 90a368ed2172595568d8b9ff0f67de1b 108 Hamap MF_01954 Urease subunit beta [ureB]. 1 103 32.053 T 06-07-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19590 90a368ed2172595568d8b9ff0f67de1b 108 Pfam PF00699 Urease beta subunit 3 102 1.2E-44 T 06-07-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS19590 90a368ed2172595568d8b9ff0f67de1b 108 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 104 1.7E-44 T 06-07-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM402_RS13705 469f2de22253bcda960c60582cae2a91 40 Gene3D G3DSA:3.40.718.10 4 40 6.7E-5 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS13705 469f2de22253bcda960c60582cae2a91 40 SUPERFAMILY SSF53659 2 40 5.32E-7 T 06-07-2017 AM402_RS03795 e96d3ff75f3177296640cf73de99abaf 181 Gene3D G3DSA:3.90.79.10 6 166 9.3E-50 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS03795 e96d3ff75f3177296640cf73de99abaf 181 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 8 164 6.3E-35 T 06-07-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM402_RS03795 e96d3ff75f3177296640cf73de99abaf 181 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 6 176 31.174 T 06-07-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM402_RS03795 e96d3ff75f3177296640cf73de99abaf 181 Pfam PF00293 NUDIX domain 32 161 3.0E-19 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS03795 e96d3ff75f3177296640cf73de99abaf 181 SUPERFAMILY SSF55811 7 165 3.79E-42 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS03795 e96d3ff75f3177296640cf73de99abaf 181 PIRSF PIRSF018427 1 181 2.1E-51 T 06-07-2017 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 Pfam PF01979 Amidohydrolase family 52 370 2.0E-18 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 SUPERFAMILY SSF51338 352 382 1.92E-9 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 SUPERFAMILY SSF51338 5 54 1.92E-9 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 Gene3D G3DSA:2.30.40.10 338 386 7.2E-5 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 Gene3D G3DSA:3.20.20.140 69 337 4.8E-101 T 06-07-2017 AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 SUPERFAMILY SSF51556 55 352 9.9E-94 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 PIRSF PIRSF038994 3 385 2.1E-125 T 06-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 2 379 1.3E-94 T 06-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM402_RS07135 9379e8d3e3fb512f9d924edeff6b8a33 389 Gene3D G3DSA:2.30.40.10 12 68 2.6E-7 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS05795 de1d112613cc2b02f39b1ee2e66e82cc 335 PIRSF PIRSF000267 2 335 5.3E-88 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS05795 de1d112613cc2b02f39b1ee2e66e82cc 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 3.5E-42 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS05795 de1d112613cc2b02f39b1ee2e66e82cc 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 324 1.2E-94 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 Gene3D G3DSA:1.10.1660.10 56 131 8.6E-29 T 06-07-2017 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 3.0E-63 T 06-07-2017 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 Gene3D G3DSA:1.10.1660.10 1 55 3.2E-24 T 06-07-2017 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.0E-9 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.0E-9 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.0E-9 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 SMART SM00422 1 70 9.9E-33 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 Pfam PF00376 MerR family regulatory protein 2 39 5.4E-18 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 SUPERFAMILY SSF46955 1 126 2.53E-38 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS07495 a68e61b7aca95a7be73f727e2dacc65e 135 Pfam PF09278 MerR, DNA binding 47 108 1.1E-18 T 06-07-2017 IPR015358 Transcription regulator MerR, DNA binding AM402_RS17330 47fb0151e0d7242e0243c90ba755d333 339 Pfam PF00437 Type II/IV secretion system protein 14 270 8.2E-38 T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM402_RS17330 47fb0151e0d7242e0243c90ba755d333 339 SUPERFAMILY SSF52540 4 331 2.76E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17330 47fb0151e0d7242e0243c90ba755d333 339 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 332 7.3E-119 T 06-07-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AM402_RS17330 47fb0151e0d7242e0243c90ba755d333 339 SMART SM00382 124 251 0.0056 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS17330 47fb0151e0d7242e0243c90ba755d333 339 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 195 209 - T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM402_RS17330 47fb0151e0d7242e0243c90ba755d333 339 Gene3D G3DSA:3.40.50.300 103 320 1.5E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00485 836d7c16b13281c75430fe9a863466a5 841 Pfam PF13954 PapC N-terminal domain 46 193 2.7E-37 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS00485 836d7c16b13281c75430fe9a863466a5 841 Pfam PF13953 PapC C-terminal domain 761 825 1.6E-19 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS00485 836d7c16b13281c75430fe9a863466a5 841 SUPERFAMILY SSF141729 72 186 2.75E-27 T 06-07-2017 AM402_RS00485 836d7c16b13281c75430fe9a863466a5 841 Pfam PF00577 Outer membrane usher protein 212 752 3.1E-183 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS12940 50388ae56eb5c753c6fc8947ceedc032 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 6.7E-33 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AM402_RS12940 50388ae56eb5c753c6fc8947ceedc032 89 SUPERFAMILY SSF55229 32 85 9.55E-17 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AM402_RS12940 50388ae56eb5c753c6fc8947ceedc032 89 Gene3D G3DSA:3.30.1070.10 31 86 9.8E-24 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AM402_RS12940 50388ae56eb5c753c6fc8947ceedc032 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.627 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AM402_RS12940 50388ae56eb5c753c6fc8947ceedc032 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 1.4E-23 T 06-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AM402_RS19770 cbe526d92de0efa0761d9d7b2ac8b7cf 155 Gene3D G3DSA:3.40.930.10 2 155 7.5E-45 T 06-07-2017 IPR002178 PTS EIIA type-2 domain AM402_RS19770 cbe526d92de0efa0761d9d7b2ac8b7cf 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 06-07-2017 IPR002178 PTS EIIA type-2 domain AM402_RS19770 cbe526d92de0efa0761d9d7b2ac8b7cf 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 18 154 7.0E-34 T 06-07-2017 IPR002178 PTS EIIA type-2 domain AM402_RS19770 cbe526d92de0efa0761d9d7b2ac8b7cf 155 SUPERFAMILY SSF55804 7 155 2.88E-39 T 06-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM402_RS19770 cbe526d92de0efa0761d9d7b2ac8b7cf 155 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 4.1E-54 T 06-07-2017 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AM402_RS00125 1e842c31a117548a30e302a0a2e0e7cb 133 SUPERFAMILY SSF89919 2 111 2.62E-32 T 06-07-2017 IPR023799 Ribosome-binding factor A domain AM402_RS00125 1e842c31a117548a30e302a0a2e0e7cb 133 Pfam PF02033 Ribosome-binding factor A 7 116 1.9E-31 T 06-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 AM402_RS00125 1e842c31a117548a30e302a0a2e0e7cb 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 83 104 - T 06-07-2017 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AM402_RS00125 1e842c31a117548a30e302a0a2e0e7cb 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 122 1.1E-41 T 06-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 AM402_RS00125 1e842c31a117548a30e302a0a2e0e7cb 133 Gene3D G3DSA:3.30.300.20 5 125 1.8E-39 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta AM402_RS00125 1e842c31a117548a30e302a0a2e0e7cb 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 104 5.0E-42 T 06-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 AM402_RS00125 1e842c31a117548a30e302a0a2e0e7cb 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 124 23.242 T 06-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 Pfam PF01751 Toprim domain 3 130 2.0E-18 T 06-07-2017 IPR006171 Toprim domain AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 Pfam PF01131 DNA topoisomerase 150 596 4.7E-117 T 06-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 Gene3D G3DSA:3.30.65.10 624 657 9.1E-9 T 06-07-2017 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 324 - T 06-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 624 659 1.9E-10 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 SMART SM00493 1 123 2.1E-21 T 06-07-2017 IPR006171 Toprim domain AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 Gene3D G3DSA:3.40.50.140 1 148 8.3E-45 T 06-07-2017 IPR006171 Toprim domain AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 Gene3D G3DSA:1.10.290.10 282 409 5.0E-36 T 06-07-2017 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 SUPERFAMILY SSF56712 1 608 1.7E-179 T 06-07-2017 IPR023405 DNA topoisomerase, type IA, core domain AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 660 9.1E-239 T 06-07-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 Gene3D G3DSA:1.10.460.10 478 608 2.5E-52 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 Gene3D G3DSA:1.10.460.10 153 212 2.5E-52 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 SMART SM00436 123 218 3.8E-36 T 06-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 SMART SM00437 272 562 2.1E-66 T 06-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 SUPERFAMILY SSF57783 623 657 5.61E-8 T 06-07-2017 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 188 206 6.3E-27 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 6.3E-27 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 6.3E-27 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 6.3E-27 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS17680 3d399cffc2b9b76024d5afbc15e22349 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 525 539 6.3E-27 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 484 604 2.3E-40 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 Pfam PF02378 Phosphotransferase system, EIIC 110 387 2.7E-33 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 628 1.6E-231 T 06-07-2017 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 Gene3D G3DSA:3.30.1360.60 1 81 3.2E-24 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 Gene3D G3DSA:2.70.70.10 481 628 7.9E-54 T 06-07-2017 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 SUPERFAMILY SSF51261 483 625 3.14E-48 T 06-07-2017 IPR011055 Duplicated hybrid motif AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 484 606 7.5E-46 T 06-07-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.5E-14 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS06535 b684bbb05bc59cb3ca685ea3178dd6d8 629 SUPERFAMILY SSF55604 6 80 1.44E-19 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS01965 d5427dd8226fe793c34a273bb2e1525f 270 SUPERFAMILY SSF56925 105 251 7.77E-21 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS01965 d5427dd8226fe793c34a273bb2e1525f 270 Pfam PF01298 Transferrin binding protein-like solute binding protein 151 250 2.8E-7 T 06-07-2017 IPR001677 Solute-binding protein, transferrin-binding protein-like GO:0016020 AM402_RS16720 ce368ae3d64caec3b195d9bbc66ed5d5 276 SUPERFAMILY SSF53474 2 275 2.59E-88 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS16720 ce368ae3d64caec3b195d9bbc66ed5d5 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 274 2.1E-117 T 06-07-2017 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AM402_RS16720 ce368ae3d64caec3b195d9bbc66ed5d5 276 Gene3D G3DSA:3.40.50.1820 3 275 1.5E-79 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS16720 ce368ae3d64caec3b195d9bbc66ed5d5 276 Pfam PF00756 Putative esterase 21 268 4.1E-67 T 06-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 AM402_RS12515 f2eb4c19a9e72a224670b6608c8d0879 109 Pfam PF04266 ASCH domain 12 103 1.1E-14 T 06-07-2017 IPR007374 ASCH domain AM402_RS12515 f2eb4c19a9e72a224670b6608c8d0879 109 SMART SM01022 11 109 1.3E-20 T 06-07-2017 IPR007374 ASCH domain AM402_RS12515 f2eb4c19a9e72a224670b6608c8d0879 109 Gene3D G3DSA:2.30.130.30 8 108 2.2E-37 T 06-07-2017 AM402_RS12515 f2eb4c19a9e72a224670b6608c8d0879 109 SUPERFAMILY SSF88697 8 108 3.64E-29 T 06-07-2017 IPR015947 PUA-like domain AM402_RS15720 211f316f4c58514bb31878cf07419138 453 Pfam PF03606 C4-dicarboxylate anaerobic carrier 3 448 3.3E-132 T 06-07-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM402_RS15720 211f316f4c58514bb31878cf07419138 453 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 1.3E-174 T 06-07-2017 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AM402_RS15440 bd4ebfb7cbb13a6d8d4567a8748d0b56 476 Pfam PF07690 Major Facilitator Superfamily 30 422 1.3E-31 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS15440 bd4ebfb7cbb13a6d8d4567a8748d0b56 476 SUPERFAMILY SSF103473 256 469 2.35E-33 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS15440 bd4ebfb7cbb13a6d8d4567a8748d0b56 476 SUPERFAMILY SSF103473 23 201 2.35E-33 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS15440 bd4ebfb7cbb13a6d8d4567a8748d0b56 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 147 171 1.5E-6 T 06-07-2017 AM402_RS15440 bd4ebfb7cbb13a6d8d4567a8748d0b56 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 117 137 1.5E-6 T 06-07-2017 AM402_RS15440 bd4ebfb7cbb13a6d8d4567a8748d0b56 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 413 432 1.5E-6 T 06-07-2017 AM402_RS15440 bd4ebfb7cbb13a6d8d4567a8748d0b56 476 Gene3D G3DSA:1.20.1250.20 294 466 1.2E-4 T 06-07-2017 AM402_RS15440 bd4ebfb7cbb13a6d8d4567a8748d0b56 476 Gene3D G3DSA:1.20.1250.20 26 201 2.6E-18 T 06-07-2017 AM402_RS05035 7c80ec74a1a4536bd21825229f0121bc 671 Pfam PF00361 Proton-conducting membrane transporter 135 417 3.6E-54 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05035 7c80ec74a1a4536bd21825229f0121bc 671 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 387 413 4.8E-11 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05035 7c80ec74a1a4536bd21825229f0121bc 671 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 4.8E-11 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05035 7c80ec74a1a4536bd21825229f0121bc 671 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 4.8E-11 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS04445 14d9fe8c48c6315d0bb14a5d93d43033 321 Pfam PF12833 Helix-turn-helix domain 237 316 6.6E-18 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS04445 14d9fe8c48c6315d0bb14a5d93d43033 321 Pfam PF14525 AraC-binding-like domain 32 195 1.4E-14 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM402_RS04445 14d9fe8c48c6315d0bb14a5d93d43033 321 SUPERFAMILY SSF46689 277 316 3.18E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS04445 14d9fe8c48c6315d0bb14a5d93d43033 321 Gene3D G3DSA:1.10.10.60 266 316 3.7E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS04445 14d9fe8c48c6315d0bb14a5d93d43033 321 Gene3D G3DSA:1.10.10.60 218 265 9.2E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS04445 14d9fe8c48c6315d0bb14a5d93d43033 321 SMART SM00342 230 315 1.2E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS08965 dc879229e7424288547d7410c8ce8283 336 SUPERFAMILY SSF51735 5 157 4.77E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08965 dc879229e7424288547d7410c8ce8283 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 316 7.9E-32 T 06-07-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM402_RS08965 dc879229e7424288547d7410c8ce8283 336 Gene3D G3DSA:3.30.360.10 145 313 1.2E-49 T 06-07-2017 AM402_RS08965 dc879229e7424288547d7410c8ce8283 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 4.2E-23 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM402_RS08965 dc879229e7424288547d7410c8ce8283 336 SUPERFAMILY SSF55347 132 318 5.3E-49 T 06-07-2017 AM402_RS08965 dc879229e7424288547d7410c8ce8283 336 PIRSF PIRSF000148 4 336 4.7E-92 T 06-07-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM402_RS08965 dc879229e7424288547d7410c8ce8283 336 SMART SM00859 6 121 3.0E-25 T 06-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM402_RS08965 dc879229e7424288547d7410c8ce8283 336 Gene3D G3DSA:3.40.50.720 3 144 3.5E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 SUPERFAMILY SSF46689 331 417 7.17E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 Gene3D G3DSA:3.40.50.300 142 291 2.8E-25 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 Pfam PF02954 Bacterial regulatory protein, Fis family 375 414 1.8E-9 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 SMART SM00448 9 120 2.3E-27 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 Pfam PF00072 Response regulator receiver domain 11 118 1.6E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 Gene3D G3DSA:1.10.10.60 341 416 2.9E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 Pfam PF14532 Sigma-54 interaction domain 146 291 5.0E-13 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 333 342 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 SUPERFAMILY SSF52172 7 189 2.42E-36 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 Gene3D G3DSA:1.10.8.60 294 340 5.9E-18 T 06-07-2017 AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 SUPERFAMILY SSF52540 145 349 1.62E-28 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05650 307511cf8a050cab076a54b73c087f6e 425 Gene3D G3DSA:3.40.50.2300 8 129 2.9E-31 T 06-07-2017 AM402_RS10015 8f23534793e250df779c6897f8bc5672 212 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 61 201 1.0E-54 T 06-07-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM402_RS10015 8f23534793e250df779c6897f8bc5672 212 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 6 212 41.258 T 06-07-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM402_RS10015 8f23534793e250df779c6897f8bc5672 212 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 64 210 2.9E-67 T 06-07-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 AM402_RS10015 8f23534793e250df779c6897f8bc5672 212 Gene3D G3DSA:2.40.160.20 53 212 6.9E-77 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS10015 8f23534793e250df779c6897f8bc5672 212 SUPERFAMILY SSF56925 53 212 7.85E-72 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 Pfam PF00106 short chain dehydrogenase 14 211 7.6E-46 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 Gene3D G3DSA:3.40.50.720 9 244 3.3E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 5.7E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 5.7E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 5.7E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 5.7E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 5.7E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 5.7E-20 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS12030 0cf614d7aba9537a129c88bbdeea6dd8 254 SUPERFAMILY SSF51735 11 243 8.8E-60 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS14900 d9f3adfcc09225d09c27668d500e65db 248 PIRSF PIRSF034653 1 248 2.5E-106 T 06-07-2017 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type AM402_RS14900 d9f3adfcc09225d09c27668d500e65db 248 Gene3D G3DSA:3.40.50.150 10 245 1.2E-40 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14900 d9f3adfcc09225d09c27668d500e65db 248 SUPERFAMILY SSF53335 5 244 6.72E-41 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14900 d9f3adfcc09225d09c27668d500e65db 248 Pfam PF13847 Methyltransferase domain 35 156 4.6E-11 T 06-07-2017 IPR025714 Methyltransferase domain AM402_RS09675 627dc7cf61e7311f61635882b68da3cd 421 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 64 128 2.0E-11 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS09675 627dc7cf61e7311f61635882b68da3cd 421 Gene3D G3DSA:2.160.20.10 41 383 2.3E-41 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS09675 627dc7cf61e7311f61635882b68da3cd 421 Pfam PF05860 haemagglutination activity domain 41 131 4.4E-15 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS09675 627dc7cf61e7311f61635882b68da3cd 421 SUPERFAMILY SSF51126 229 395 1.35E-22 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS09675 627dc7cf61e7311f61635882b68da3cd 421 SUPERFAMILY SSF51126 39 146 1.35E-22 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 SMART SM00382 277 472 3.0E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 SMART SM00382 29 226 9.1E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 SUPERFAMILY SSF52540 268 485 4.62E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 Pfam PF00005 ABC transporter 269 423 7.9E-24 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 Pfam PF00005 ABC transporter 21 169 1.2E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 Gene3D G3DSA:3.40.50.300 268 486 1.0E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 Gene3D G3DSA:3.40.50.300 2 234 7.8E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18985 967b94cde3cc2a9ee5deb5b5db4a52bb 502 SUPERFAMILY SSF52540 3 230 1.47E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01825 30797628889102d84c7ba165e2fb2f52 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.156 T 06-07-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AM402_RS01825 30797628889102d84c7ba165e2fb2f52 238 Gene3D G3DSA:3.30.230.70 7 237 7.6E-35 T 06-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS01825 30797628889102d84c7ba165e2fb2f52 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.9E-112 T 06-07-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AM402_RS01825 30797628889102d84c7ba165e2fb2f52 238 SUPERFAMILY SSF54211 1 181 6.07E-46 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS01825 30797628889102d84c7ba165e2fb2f52 238 SUPERFAMILY SSF55666 153 237 9.82E-26 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS01825 30797628889102d84c7ba165e2fb2f52 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 1.9E-11 T 06-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS01825 30797628889102d84c7ba165e2fb2f52 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 06-07-2017 IPR018336 Ribonuclease PH, conserved site AM402_RS01825 30797628889102d84c7ba165e2fb2f52 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 3.0E-24 T 06-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 SMART SM00344 7 114 1.4E-42 T 06-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 1.5E-17 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 06-07-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.3E-11 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.3E-11 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.3E-11 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 SUPERFAMILY SSF46785 5 67 3.9E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 54 1.8E-13 T 06-07-2017 AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 Gene3D G3DSA:3.30.70.920 70 144 3.3E-23 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 SUPERFAMILY SSF54909 68 153 1.47E-19 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS02340 8e0d2a43300cc47ff8d68fa518506bc4 153 Gene3D G3DSA:1.10.10.10 4 58 1.3E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07355 d0a65571d340811b7106c6ff3e4fb7ce 559 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 1.4E-19 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS07355 d0a65571d340811b7106c6ff3e4fb7ce 559 SUPERFAMILY SSF53850 120 549 3.26E-54 T 06-07-2017 AM402_RS07355 d0a65571d340811b7106c6ff3e4fb7ce 559 Gene3D G3DSA:1.10.10.10 21 69 9.4E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07355 d0a65571d340811b7106c6ff3e4fb7ce 559 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 116 2.8E-41 T 06-07-2017 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AM402_RS07355 d0a65571d340811b7106c6ff3e4fb7ce 559 Gene3D G3DSA:3.90.76.10 140 266 9.4E-21 T 06-07-2017 AM402_RS07355 d0a65571d340811b7106c6ff3e4fb7ce 559 Gene3D G3DSA:3.40.190.10 267 308 2.3E-5 T 06-07-2017 AM402_RS04575 a6a3179c0eb47901fe46f37a475c7a17 136 Gene3D G3DSA:2.60.40.1090 9 136 4.7E-19 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04575 a6a3179c0eb47901fe46f37a475c7a17 136 SUPERFAMILY SSF49401 7 136 3.73E-16 T 06-07-2017 IPR008966 Adhesion domain AM402_RS04575 a6a3179c0eb47901fe46f37a475c7a17 136 Pfam PF16970 Type-1 fimbrial protein, A 27 136 1.5E-39 T 06-07-2017 AM402_RS08115 db074f63a3b0839a6fb2c5c6b1b0e612 356 PIRSF PIRSF005096 10 356 8.3E-110 T 06-07-2017 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM402_RS08115 db074f63a3b0839a6fb2c5c6b1b0e612 356 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 180 189 - T 06-07-2017 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM402_RS08115 db074f63a3b0839a6fb2c5c6b1b0e612 356 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 23 354 3.6E-129 T 06-07-2017 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AM402_RS08115 db074f63a3b0839a6fb2c5c6b1b0e612 356 SUPERFAMILY SSF74650 14 354 1.0E-103 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM402_RS08115 db074f63a3b0839a6fb2c5c6b1b0e612 356 Gene3D G3DSA:2.70.98.10 20 354 4.7E-117 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AM402_RS08115 db074f63a3b0839a6fb2c5c6b1b0e612 356 Pfam PF01263 Aldose 1-epimerase 27 353 1.3E-87 T 06-07-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM402_RS18365 802a33f201be1180bd88f675060f2232 252 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 242 3.0E-93 T 06-07-2017 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS18365 802a33f201be1180bd88f675060f2232 252 SMART SM00479 7 184 1.8E-48 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS18365 802a33f201be1180bd88f675060f2232 252 Gene3D G3DSA:3.30.420.10 7 184 1.3E-65 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS18365 802a33f201be1180bd88f675060f2232 252 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 225 7.7E-89 T 06-07-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS18365 802a33f201be1180bd88f675060f2232 252 SUPERFAMILY SSF53098 7 184 3.8E-52 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS18365 802a33f201be1180bd88f675060f2232 252 Pfam PF00929 Exonuclease 9 175 1.4E-39 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 06-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 SMART SM00382 28 180 1.0E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 294 311 6.4E-5 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 311 331 6.4E-5 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 SUPERFAMILY SSF46689 222 330 2.2E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 Pfam PF00158 Sigma-54 interaction domain 8 170 4.8E-59 T 06-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 SUPERFAMILY SSF52540 8 249 1.56E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 328 3.1E-155 T 06-07-2017 IPR014317 Transcription activator PspF AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 Gene3D G3DSA:1.10.8.60 180 234 2.5E-21 T 06-07-2017 AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 Gene3D G3DSA:3.40.50.300 3 179 2.2E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 Gene3D G3DSA:1.10.10.60 235 327 3.6E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 Pfam PF02954 Bacterial regulatory protein, Fis family 291 322 3.3E-5 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS11830 e95f6ebe5136f919d1f35b66a510c8e7 334 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 06-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AM402_RS19665 260553a60557bf36a6e2bf6bd0db5c2e 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.533 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM402_RS19665 260553a60557bf36a6e2bf6bd0db5c2e 142 PIRSF PIRSF002181 1 142 5.9E-52 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM402_RS19665 260553a60557bf36a6e2bf6bd0db5c2e 142 SUPERFAMILY SSF52161 1 140 1.06E-60 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM402_RS19665 260553a60557bf36a6e2bf6bd0db5c2e 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.9E-67 T 06-07-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS19665 260553a60557bf36a6e2bf6bd0db5c2e 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 06-07-2017 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AM402_RS19665 260553a60557bf36a6e2bf6bd0db5c2e 142 Gene3D G3DSA:3.90.1180.10 3 141 2.9E-65 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM402_RS19665 260553a60557bf36a6e2bf6bd0db5c2e 142 Pfam PF00572 Ribosomal protein L13 15 138 2.0E-56 T 06-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM402_RS03990 276ec7a461c6d704bfd3dc1316c8b94a 186 SUPERFAMILY SSF49401 40 185 1.34E-36 T 06-07-2017 IPR008966 Adhesion domain AM402_RS03990 276ec7a461c6d704bfd3dc1316c8b94a 186 Pfam PF00419 Fimbrial protein 41 185 1.8E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS03990 276ec7a461c6d704bfd3dc1316c8b94a 186 Gene3D G3DSA:2.60.40.1090 39 185 4.3E-40 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18890 c26b1d466443f95d9ec70649d7562b93 506 SUPERFAMILY SSF103473 7 403 5.23E-41 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS18890 c26b1d466443f95d9ec70649d7562b93 506 Pfam PF07690 Major Facilitator Superfamily 17 366 3.0E-28 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS18890 c26b1d466443f95d9ec70649d7562b93 506 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 3.9E-114 T 06-07-2017 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 AM402_RS18890 c26b1d466443f95d9ec70649d7562b93 506 Gene3D G3DSA:1.20.1250.20 14 199 1.6E-16 T 06-07-2017 AM402_RS18890 c26b1d466443f95d9ec70649d7562b93 506 Gene3D G3DSA:1.20.1250.20 223 405 3.0E-12 T 06-07-2017 AM402_RS00820 b622a84907ae45c5253666e29db4871c 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 2.2E-26 T 06-07-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM402_RS00820 b622a84907ae45c5253666e29db4871c 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 274 30.312 T 06-07-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM402_RS00820 b622a84907ae45c5253666e29db4871c 274 SUPERFAMILY SSF51735 102 271 1.74E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00820 b622a84907ae45c5253666e29db4871c 274 Gene3D G3DSA:3.40.192.10 1 107 3.3E-37 T 06-07-2017 AM402_RS00820 b622a84907ae45c5253666e29db4871c 274 SUPERFAMILY SSF53223 2 101 1.73E-31 T 06-07-2017 AM402_RS00820 b622a84907ae45c5253666e29db4871c 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 272 3.5E-85 T 06-07-2017 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM402_RS00820 b622a84907ae45c5253666e29db4871c 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 123 193 5.9E-8 T 06-07-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM402_RS00820 b622a84907ae45c5253666e29db4871c 274 Gene3D G3DSA:3.40.50.720 108 246 2.5E-40 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15130 fa5e3759474e101e30593f3ab582f7ca 396 SUPERFAMILY SSF53383 1 395 2.07E-120 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS15130 fa5e3759474e101e30593f3ab582f7ca 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 6.9E-39 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM402_RS15130 fa5e3759474e101e30593f3ab582f7ca 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 6.9E-39 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM402_RS15130 fa5e3759474e101e30593f3ab582f7ca 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 6.9E-39 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM402_RS15130 fa5e3759474e101e30593f3ab582f7ca 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 6.9E-39 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM402_RS15130 fa5e3759474e101e30593f3ab582f7ca 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 06-07-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM402_RS15130 fa5e3759474e101e30593f3ab582f7ca 396 Gene3D G3DSA:3.40.640.10 45 315 4.9E-109 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS15130 fa5e3759474e101e30593f3ab582f7ca 396 Pfam PF00155 Aminotransferase class I and II 27 392 5.5E-91 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS00875 4424afe2124680590838899ab90c1f62 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 9.8E-50 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00875 4424afe2124680590838899ab90c1f62 128 Gene3D G3DSA:3.90.1030.10 1 117 5.1E-51 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00875 4424afe2124680590838899ab90c1f62 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00875 4424afe2124680590838899ab90c1f62 128 Pfam PF01196 Ribosomal protein L17 20 116 4.8E-34 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00875 4424afe2124680590838899ab90c1f62 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.53 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00875 4424afe2124680590838899ab90c1f62 128 SUPERFAMILY SSF64263 1 118 1.16E-50 T 06-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 90 1.9E-44 T 06-07-2017 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 Pfam PF00403 Heavy-metal-associated domain 25 85 2.6E-17 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 SUPERFAMILY SSF55008 17 88 6.15E-22 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 5.8E-57 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 5.8E-57 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 5.8E-57 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 5.8E-57 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 5.8E-57 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 5.8E-57 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS21930 a297bf89f6d2eec029ae0c1d77112e66 91 Gene3D G3DSA:3.30.70.100 21 88 2.3E-23 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 Gene3D G3DSA:3.40.50.880 2 190 4.0E-67 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 1.1E-55 T 06-07-2017 IPR017926 Glutamine amidotransferase AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.4E-5 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.4E-5 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 1.6E-89 T 06-07-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.6E-36 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 4.6E-36 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.6E-36 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.6E-36 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.6E-36 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.6E-36 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 SUPERFAMILY SSF52317 1 190 4.23E-55 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.2E-14 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.2E-14 T 06-07-2017 AM402_RS03505 af733b69f8c568ec8f08df8d71db72a4 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.2E-14 T 06-07-2017 AM402_RS05990 a301a579faf69ca3bcc42ffad378fd12 273 Pfam PF00149 Calcineurin-like phosphoesterase 4 127 5.1E-14 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AM402_RS05990 a301a579faf69ca3bcc42ffad378fd12 273 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 269 8.3E-150 T 06-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM402_RS05990 a301a579faf69ca3bcc42ffad378fd12 273 PIRSF PIRSF000903 1 272 1.3E-126 T 06-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM402_RS05990 a301a579faf69ca3bcc42ffad378fd12 273 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.369 T 06-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM402_RS05990 a301a579faf69ca3bcc42ffad378fd12 273 SUPERFAMILY SSF56300 1 259 1.22E-58 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS05990 a301a579faf69ca3bcc42ffad378fd12 273 Gene3D G3DSA:3.60.21.10 169 264 3.0E-55 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS05990 a301a579faf69ca3bcc42ffad378fd12 273 Gene3D G3DSA:3.60.21.10 1 132 3.0E-55 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS05735 e068c6f7884dbcc3967bf3e9a6fded50 194 Pfam PF02342 TerD domain 2 178 5.2E-49 T 06-07-2017 IPR003325 TerD domain GO:0006950 AM402_RS05735 e068c6f7884dbcc3967bf3e9a6fded50 194 Gene3D G3DSA:2.60.60.30 18 179 5.2E-54 T 06-07-2017 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 06-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 PIRSF PIRSF001456 3 355 5.1E-141 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 06-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 Gene3D G3DSA:3.60.150.10 9 352 8.2E-159 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 06-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 SUPERFAMILY SSF103263 4 351 3.27E-148 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 1.6E-139 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 37.734 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS08910 e3a217a3094ae91c0c8d67f54535f8b4 361 Pfam PF01264 Chorismate synthase 10 345 2.8E-142 T 06-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM402_RS02815 f19ab644fc4a4760bed8613296b82a7e 213 Pfam PF13247 4Fe-4S dicluster domain 72 165 8.5E-27 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS02815 f19ab644fc4a4760bed8613296b82a7e 213 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 14 175 2.7E-79 T 06-07-2017 IPR014297 Dimethylsulphoxide reductase, chain B AM402_RS02815 f19ab644fc4a4760bed8613296b82a7e 213 Gene3D G3DSA:3.30.70.20 14 85 2.8E-17 T 06-07-2017 AM402_RS02815 f19ab644fc4a4760bed8613296b82a7e 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS02815 f19ab644fc4a4760bed8613296b82a7e 213 Pfam PF12800 4Fe-4S binding domain 22 36 0.12 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS02815 f19ab644fc4a4760bed8613296b82a7e 213 Gene3D G3DSA:3.30.70.20 86 130 2.4E-23 T 06-07-2017 AM402_RS02815 f19ab644fc4a4760bed8613296b82a7e 213 Gene3D G3DSA:3.30.70.20 131 176 1.8E-15 T 06-07-2017 AM402_RS02815 f19ab644fc4a4760bed8613296b82a7e 213 SUPERFAMILY SSF54862 13 200 3.35E-65 T 06-07-2017 AM402_RS04315 edb5039db285ac575438bb4522416e89 153 Gene3D G3DSA:1.10.10.10 6 61 3.1E-8 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS04315 edb5039db285ac575438bb4522416e89 153 Hamap MF_01114 Regulatory protein RecX [recX]. 4 152 12.072 T 06-07-2017 IPR003783 Regulatory protein RecX GO:0006282 AM402_RS04315 edb5039db285ac575438bb4522416e89 153 Gene3D G3DSA:1.10.10.10 62 106 1.3E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS04315 edb5039db285ac575438bb4522416e89 153 Gene3D G3DSA:1.10.10.10 108 152 8.2E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS04315 edb5039db285ac575438bb4522416e89 153 Pfam PF02631 RecX family 43 152 3.6E-29 T 06-07-2017 IPR003783 Regulatory protein RecX GO:0006282 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.504 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 5.2E-15 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 Gene3D G3DSA:1.10.10.60 27 98 2.8E-29 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 PIRSF PIRSF002097 1 98 2.8E-46 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.3E-34 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.3E-34 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.3E-34 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.3E-34 T 06-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.6E-14 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.6E-14 T 06-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM402_RS19890 449a16740a8ff9a3c1cc27fd42061b8d 98 SUPERFAMILY SSF46689 4 98 7.53E-28 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 Gene3D G3DSA:1.10.10.10 25 166 9.3E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 Pfam PF01047 MarR family 57 116 4.9E-15 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 5.2E-21 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 5.2E-21 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 92 5.2E-21 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 142 162 5.2E-21 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 ProSitePatterns PS01117 MarR-type HTH domain signature. 91 125 - T 06-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 SMART SM00347 50 152 8.0E-30 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS16935 e3fb47fba178937330b80497d8df08f2 175 SUPERFAMILY SSF46785 27 169 1.54E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS13960 dc42856e63cc172ad8f57c1ebfd3c210 80 Gene3D G3DSA:1.10.1660.20 2 79 1.5E-25 T 06-07-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM402_RS13960 dc42856e63cc172ad8f57c1ebfd3c210 80 SUPERFAMILY SSF46955 3 78 7.32E-18 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS13960 dc42856e63cc172ad8f57c1ebfd3c210 80 Pfam PF07825 Excisionase-like protein 4 54 7.3E-9 T 06-07-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM402_RS14230 dc42856e63cc172ad8f57c1ebfd3c210 80 Gene3D G3DSA:1.10.1660.20 2 79 1.5E-25 T 06-07-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM402_RS14230 dc42856e63cc172ad8f57c1ebfd3c210 80 SUPERFAMILY SSF46955 3 78 7.32E-18 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS14230 dc42856e63cc172ad8f57c1ebfd3c210 80 Pfam PF07825 Excisionase-like protein 4 54 7.3E-9 T 06-07-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM402_RS21750 4294d801f04bf7193c34970f99b124b1 503 Gene3D G3DSA:3.40.50.300 262 342 1.6E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21750 4294d801f04bf7193c34970f99b124b1 503 Gene3D G3DSA:3.40.50.300 410 472 1.6E-13 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21750 4294d801f04bf7193c34970f99b124b1 503 Pfam PF13361 UvrD-like helicase C-terminal domain 374 467 4.3E-9 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM402_RS21750 4294d801f04bf7193c34970f99b124b1 503 Pfam PF00580 UvrD/REP helicase N-terminal domain 161 239 5.5E-11 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AM402_RS21750 4294d801f04bf7193c34970f99b124b1 503 Gene3D G3DSA:3.40.50.300 8 239 1.5E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21750 4294d801f04bf7193c34970f99b124b1 503 SUPERFAMILY SSF52540 8 472 1.72E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08095 432dccb2cfc107288c83d609aecf4406 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 286 2.1E-62 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM402_RS08095 432dccb2cfc107288c83d609aecf4406 319 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM402_RS08095 432dccb2cfc107288c83d609aecf4406 319 Gene3D G3DSA:3.40.50.720 112 286 1.5E-67 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08095 432dccb2cfc107288c83d609aecf4406 319 SUPERFAMILY SSF52283 1 133 1.51E-27 T 06-07-2017 AM402_RS08095 432dccb2cfc107288c83d609aecf4406 319 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 06-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM402_RS08095 432dccb2cfc107288c83d609aecf4406 319 Gene3D G3DSA:3.40.50.720 2 111 2.1E-29 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08095 432dccb2cfc107288c83d609aecf4406 319 SUPERFAMILY SSF51735 99 287 5.5E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS08095 432dccb2cfc107288c83d609aecf4406 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 7.0E-28 T 06-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM402_RS15575 a98e60d789a876227265b7cdf7d547df 487 Pfam PF11066 Protein of unknown function (DUF2867) 333 464 4.1E-15 T 06-07-2017 IPR021295 Protein of unknown function DUF2867 AM402_RS15575 a98e60d789a876227265b7cdf7d547df 487 Gene3D G3DSA:3.40.50.720 1 222 1.2E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15575 a98e60d789a876227265b7cdf7d547df 487 Pfam PF13460 NAD(P)H-binding 10 144 2.6E-17 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15575 a98e60d789a876227265b7cdf7d547df 487 SUPERFAMILY SSF51735 1 296 4.45E-45 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS05760 d93693a5ce05cb1aafbc51d0d26d43b9 191 Gene3D G3DSA:2.60.60.30 20 184 7.2E-71 T 06-07-2017 AM402_RS05760 d93693a5ce05cb1aafbc51d0d26d43b9 191 Pfam PF02342 TerD domain 1 187 3.0E-83 T 06-07-2017 IPR003325 TerD domain GO:0006950 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 Pfam PF00391 PEP-utilising enzyme, mobile domain 403 471 6.0E-13 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 127 1.0E-37 T 06-07-2017 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 Gene3D G3DSA:3.50.30.10 383 479 6.4E-21 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 SUPERFAMILY SSF52009 361 477 1.7E-18 T 06-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 Pfam PF00381 PTS HPr component phosphorylation site 158 235 2.2E-17 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 157 233 1.1E-15 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 Pfam PF03610 PTS system fructose IIA component 4 120 4.7E-26 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 SUPERFAMILY SSF55594 158 241 8.37E-20 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 Gene3D G3DSA:3.30.1340.10 157 241 3.4E-24 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 Pfam PF05524 PEP-utilising enzyme, N-terminal 280 376 7.2E-18 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 PRINTS PR00107 Phosphocarrier protein signature 167 183 2.5E-7 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 PRINTS PR00107 Phosphocarrier protein signature 207 224 2.5E-7 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 Gene3D G3DSA:1.10.274.10 285 382 1.5E-28 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 SUPERFAMILY SSF47831 285 391 1.44E-26 T 06-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 Gene3D G3DSA:3.40.50.510 1 132 3.4E-46 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 SUPERFAMILY SSF53062 1 128 9.55E-33 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM402_RS05655 6b83a0bb4bc56ec9e4af43d6625a1927 480 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 167 174 - T 06-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM402_RS19545 715d2dff1c4baef2a0301ffac198d073 292 PIRSF PIRSF005917 2 288 7.2E-107 T 06-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS19545 715d2dff1c4baef2a0301ffac198d073 292 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 37.801 T 06-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS19545 715d2dff1c4baef2a0301ffac198d073 292 Gene3D G3DSA:3.30.950.10 122 236 7.6E-42 T 06-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS19545 715d2dff1c4baef2a0301ffac198d073 292 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 06-07-2017 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS19545 715d2dff1c4baef2a0301ffac198d073 292 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 1.6E-106 T 06-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS19545 715d2dff1c4baef2a0301ffac198d073 292 Gene3D G3DSA:3.40.1010.10 13 121 8.7E-16 T 06-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS19545 715d2dff1c4baef2a0301ffac198d073 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 3.3E-25 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS19545 715d2dff1c4baef2a0301ffac198d073 292 SUPERFAMILY SSF53790 12 232 9.95E-83 T 06-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM402_RS05985 20c48adc8f150eaa01ce3386c72a9a49 161 Gene3D G3DSA:3.40.430.10 1 160 4.6E-57 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS05985 20c48adc8f150eaa01ce3386c72a9a49 161 SUPERFAMILY SSF53597 1 160 1.36E-54 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS05985 20c48adc8f150eaa01ce3386c72a9a49 161 PIRSF PIRSF000194 1 161 7.8E-57 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS05985 20c48adc8f150eaa01ce3386c72a9a49 161 PRINTS PR00070 Dihydrofolate reductase signature 14 24 3.9E-13 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS05985 20c48adc8f150eaa01ce3386c72a9a49 161 PRINTS PR00070 Dihydrofolate reductase signature 91 105 3.9E-13 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS05985 20c48adc8f150eaa01ce3386c72a9a49 161 PRINTS PR00070 Dihydrofolate reductase signature 28 36 3.9E-13 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS05985 20c48adc8f150eaa01ce3386c72a9a49 161 PRINTS PR00070 Dihydrofolate reductase signature 41 52 3.9E-13 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS05985 20c48adc8f150eaa01ce3386c72a9a49 161 Pfam PF00186 Dihydrofolate reductase 3 159 3.5E-58 T 06-07-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS05400 577d901c394b9bb356f8f6f51a6711a2 139 Gene3D G3DSA:2.10.109.10 103 139 2.4E-13 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS05400 577d901c394b9bb356f8f6f51a6711a2 139 Gene3D G3DSA:2.10.109.10 38 64 2.4E-13 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS05400 577d901c394b9bb356f8f6f51a6711a2 139 ProSitePatterns PS00760 Signal peptidases I lysine active site. 56 68 - T 06-07-2017 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AM402_RS05400 577d901c394b9bb356f8f6f51a6711a2 139 SUPERFAMILY SSF51306 43 139 9.94E-18 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS05400 577d901c394b9bb356f8f6f51a6711a2 139 Pfam PF10502 Signal peptidase, peptidase S26 49 139 2.8E-15 T 06-07-2017 IPR019533 Peptidase S26 AM402_RS14045 df00d1464a180cf7e2be7e41c748db52 134 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 14 97 6.1E-6 T 06-07-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component AM402_RS14045 df00d1464a180cf7e2be7e41c748db52 134 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 130 1.8E-16 T 06-07-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component AM402_RS07390 ff6314c41c08af8102913b20b9292917 602 Gene3D G3DSA:3.40.50.980 12 192 7.1E-30 T 06-07-2017 AM402_RS07390 ff6314c41c08af8102913b20b9292917 602 Pfam PF00501 AMP-binding enzyme 22 470 2.6E-89 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM402_RS07390 ff6314c41c08af8102913b20b9292917 602 SUPERFAMILY SSF56801 11 289 3.92E-112 T 06-07-2017 AM402_RS07390 ff6314c41c08af8102913b20b9292917 602 SUPERFAMILY SSF56801 340 600 3.92E-112 T 06-07-2017 AM402_RS07390 ff6314c41c08af8102913b20b9292917 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 06-07-2017 IPR020845 AMP-binding, conserved site AM402_RS07390 ff6314c41c08af8102913b20b9292917 602 Gene3D G3DSA:3.40.50.980 193 284 3.3E-29 T 06-07-2017 AM402_RS07390 ff6314c41c08af8102913b20b9292917 602 Gene3D G3DSA:3.40.50.980 337 399 3.3E-29 T 06-07-2017 AM402_RS07390 ff6314c41c08af8102913b20b9292917 602 Gene3D G3DSA:2.30.38.10 400 461 3.9E-21 T 06-07-2017 AM402_RS21855 d26c7b758f91ea100566b812858da12b 330 Gene3D G3DSA:3.40.50.300 25 207 3.8E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21855 d26c7b758f91ea100566b812858da12b 330 Pfam PF05621 Bacterial TniB protein 27 278 4.2E-105 T 06-07-2017 IPR008868 Bacterial TniB AM402_RS21855 d26c7b758f91ea100566b812858da12b 330 SUPERFAMILY SSF52540 34 228 2.14E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04745 51fcddd0b72926fdc7b9066872b175ae 249 Pfam PF14348 Domain of unknown function (DUF4400) 54 246 1.0E-72 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type AM402_RS04745 51fcddd0b72926fdc7b9066872b175ae 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 23 249 1.6E-96 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type AM402_RS14100 747ecdc4a58ce3e4b4bdd26a5af655f5 187 Gene3D G3DSA:3.20.170.10 86 155 5.1E-7 T 06-07-2017 AM402_RS14100 747ecdc4a58ce3e4b4bdd26a5af655f5 187 Pfam PF10386 Protein of unknown function (DUF2441) 85 164 9.9E-10 T 06-07-2017 IPR018840 Protein of unknown function DUF2441 AM402_RS14100 747ecdc4a58ce3e4b4bdd26a5af655f5 187 SUPERFAMILY SSF56399 47 186 5.75E-22 T 06-07-2017 AM402_RS19815 e19417ad06dd5b6008f0026d065a05d1 286 Pfam PF00795 Carbon-nitrogen hydrolase 6 240 2.3E-45 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS19815 e19417ad06dd5b6008f0026d065a05d1 286 Gene3D G3DSA:3.60.110.10 1 269 2.4E-73 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS19815 e19417ad06dd5b6008f0026d065a05d1 286 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 06-07-2017 IPR001110 Uncharacterised protein family UPF0012, conserved site AM402_RS19815 e19417ad06dd5b6008f0026d065a05d1 286 SUPERFAMILY SSF56317 1 266 7.85E-70 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 SUPERFAMILY SSF51366 1 252 4.71E-85 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 251 1.5E-96 T 06-07-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 253 35.112 T 06-07-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 446 3.7E-55 T 06-07-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 Gene3D G3DSA:3.20.20.70 1 258 5.7E-104 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 49 67 - T 06-07-2017 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 Gene3D G3DSA:3.20.20.70 259 444 1.3E-61 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 SUPERFAMILY SSF51366 255 448 3.45E-55 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM402_RS11985 13d5e403f204b72a80fab2250cfa919b 457 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 257 451 28.494 T 06-07-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM402_RS18440 39c146aece1f4f544f611402856c0904 276 Gene3D G3DSA:3.40.50.1980 26 140 8.8E-31 T 06-07-2017 AM402_RS18440 39c146aece1f4f544f611402856c0904 276 Pfam PF01497 Periplasmic binding protein 29 229 4.3E-26 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM402_RS18440 39c146aece1f4f544f611402856c0904 276 Gene3D G3DSA:3.40.50.1980 147 271 7.4E-31 T 06-07-2017 AM402_RS18440 39c146aece1f4f544f611402856c0904 276 SUPERFAMILY SSF53807 25 271 2.52E-53 T 06-07-2017 AM402_RS18440 39c146aece1f4f544f611402856c0904 276 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 275 45.154 T 06-07-2017 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 AM402_RS06115 c09d22184553f404f71bd781a1590584 638 SUPERFAMILY SSF52540 362 393 6.29E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06115 c09d22184553f404f71bd781a1590584 638 SUPERFAMILY SSF52540 463 635 6.29E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06115 c09d22184553f404f71bd781a1590584 638 SUPERFAMILY SSF52540 290 330 6.29E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06115 c09d22184553f404f71bd781a1590584 638 Gene3D G3DSA:3.40.50.300 118 327 2.7E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06115 c09d22184553f404f71bd781a1590584 638 Gene3D G3DSA:3.40.50.300 365 385 2.7E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06115 c09d22184553f404f71bd781a1590584 638 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 634 51.565 T 06-07-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM402_RS06115 c09d22184553f404f71bd781a1590584 638 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 636 2.5E-189 T 06-07-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM402_RS06115 c09d22184553f404f71bd781a1590584 638 Pfam PF13604 AAA domain 163 343 3.4E-31 T 06-07-2017 AM402_RS06115 c09d22184553f404f71bd781a1590584 638 Pfam PF13538 UvrD-like helicase C-terminal domain 565 611 2.8E-15 T 06-07-2017 IPR027785 UvrD-like helicase C-terminal domain AM402_RS06115 c09d22184553f404f71bd781a1590584 638 SMART SM00382 172 386 0.0025 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS06115 c09d22184553f404f71bd781a1590584 638 SUPERFAMILY SSF52540 7 375 7.84E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06115 c09d22184553f404f71bd781a1590584 638 Gene3D G3DSA:3.40.50.300 386 476 5.1E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06115 c09d22184553f404f71bd781a1590584 638 Gene3D G3DSA:3.40.50.300 557 616 5.1E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06915 08897745d0ee325e24244f9bc7c1cb3a 197 SMART SM01040 40 130 2.3E-34 T 06-07-2017 IPR003497 BRO N-terminal domain AM402_RS06915 08897745d0ee325e24244f9bc7c1cb3a 197 Pfam PF02498 BRO family, N-terminal domain 40 130 5.8E-21 T 06-07-2017 IPR003497 BRO N-terminal domain AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 06-07-2017 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS05830 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 06-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 PRINTS PR00969 Pili chaperone signature 29 38 6.3E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 PRINTS PR00969 Pili chaperone signature 128 143 6.3E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 PRINTS PR00969 Pili chaperone signature 105 122 6.3E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 PRINTS PR00969 Pili chaperone signature 163 178 6.3E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 PRINTS PR00969 Pili chaperone signature 77 98 6.3E-27 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 SUPERFAMILY SSF49354 24 146 1.23E-29 T 06-07-2017 IPR008962 PapD-like AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 168 225 2.2E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 SUPERFAMILY SSF49584 150 228 4.19E-17 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 Gene3D G3DSA:2.60.40.1070 149 229 1.4E-19 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 Gene3D G3DSA:2.60.40.360 28 146 2.3E-36 T 06-07-2017 IPR008962 PapD-like AM402_RS04980 d448e02647fb80450347d0811dd4341e 232 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 146 2.1E-28 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS05390 ddddf27e1002aec05f9769d98bdb3b55 799 Gene3D G3DSA:3.40.50.300 589 714 1.1E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05390 ddddf27e1002aec05f9769d98bdb3b55 799 Gene3D G3DSA:3.40.50.300 429 509 1.1E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05390 ddddf27e1002aec05f9769d98bdb3b55 799 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 15 795 9.4E-213 T 06-07-2017 IPR014117 Type-IV secretion system protein TraC AM402_RS05390 ddddf27e1002aec05f9769d98bdb3b55 799 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 11 241 3.0E-52 T 06-07-2017 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM402_RS05390 ddddf27e1002aec05f9769d98bdb3b55 799 Pfam PF12846 AAA-like domain 437 692 5.7E-14 T 06-07-2017 AM402_RS05390 ddddf27e1002aec05f9769d98bdb3b55 799 SUPERFAMILY SSF52540 389 722 3.84E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20110 2eaea4f7fcad71d638dcd22c6933db45 96 SUPERFAMILY SSF159127 1 87 1.22E-26 T 06-07-2017 AM402_RS20110 2eaea4f7fcad71d638dcd22c6933db45 96 Pfam PF01455 HupF/HypC family 1 72 2.4E-27 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS20110 2eaea4f7fcad71d638dcd22c6933db45 96 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 83 4.3E-28 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS20110 2eaea4f7fcad71d638dcd22c6933db45 96 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 4.2E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS20110 2eaea4f7fcad71d638dcd22c6933db45 96 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 4.2E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS20110 2eaea4f7fcad71d638dcd22c6933db45 96 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 4.2E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS20110 2eaea4f7fcad71d638dcd22c6933db45 96 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 4.2E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS20110 2eaea4f7fcad71d638dcd22c6933db45 96 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 06-07-2017 IPR019812 Hydrogenase assembly chaperone, conserved site AM402_RS15310 7c7e0e8c3276d766c45028148ed85d18 487 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 9 472 2.1E-130 T 06-07-2017 IPR017739 Type VI secretion system-associated, VCA0119 AM402_RS15310 7c7e0e8c3276d766c45028148ed85d18 487 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 223 472 5.7E-82 T 06-07-2017 IPR017739 Type VI secretion system-associated, VCA0119 AM402_RS15310 7c7e0e8c3276d766c45028148ed85d18 487 Pfam PF06812 ImpA, N-terminal, type VI secretion system 25 112 2.0E-12 T 06-07-2017 IPR010657 ImpA, N-terminal AM402_RS01865 ff28ae9e4a54a180b6ffa7dff4f56e46 495 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 2.8E-14 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS01865 ff28ae9e4a54a180b6ffa7dff4f56e46 495 Gene3D G3DSA:1.10.10.10 17 85 1.0E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01865 ff28ae9e4a54a180b6ffa7dff4f56e46 495 SUPERFAMILY SSF46785 17 84 4.15E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01865 ff28ae9e4a54a180b6ffa7dff4f56e46 495 SUPERFAMILY SSF53383 125 494 1.51E-81 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS01865 ff28ae9e4a54a180b6ffa7dff4f56e46 495 SMART SM00345 23 82 1.0E-14 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS01865 ff28ae9e4a54a180b6ffa7dff4f56e46 495 Gene3D G3DSA:3.40.640.10 163 385 7.4E-58 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS01865 ff28ae9e4a54a180b6ffa7dff4f56e46 495 Pfam PF00155 Aminotransferase class I and II 164 435 4.8E-26 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS07725 27d0f87749ba914de1207b94b0508dec 172 Pfam PF00258 Flavodoxin 5 160 1.3E-23 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM402_RS07725 27d0f87749ba914de1207b94b0508dec 172 PIRSF PIRSF038996 1 172 6.9E-54 T 06-07-2017 IPR010086 Flavodoxin, long chain GO:0010181 AM402_RS07725 27d0f87749ba914de1207b94b0508dec 172 Gene3D G3DSA:3.40.50.360 1 168 7.6E-52 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS07725 27d0f87749ba914de1207b94b0508dec 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 3.6E-65 T 06-07-2017 IPR010086 Flavodoxin, long chain GO:0010181 AM402_RS07725 27d0f87749ba914de1207b94b0508dec 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 06-07-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM402_RS07725 27d0f87749ba914de1207b94b0508dec 172 SUPERFAMILY SSF52218 1 168 2.17E-44 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 8.9E-202 T 06-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 SMART SM00788 4 425 6.5E-299 T 06-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 Gene3D G3DSA:3.40.440.10 196 266 5.9E-71 T 06-07-2017 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 Gene3D G3DSA:3.40.440.10 3 94 5.9E-71 T 06-07-2017 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 SUPERFAMILY SSF52540 3 431 4.04E-180 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 06-07-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 Gene3D G3DSA:1.10.300.10 103 195 7.2E-38 T 06-07-2017 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.724 T 06-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 1.0E-176 T 06-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 06-07-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM402_RS00375 6b69214e629652a65d9af331e740fac5 432 Gene3D G3DSA:3.90.170.10 267 426 4.9E-66 T 06-07-2017 AM402_RS18730 be5a5a7813a56fd17b61d550b413c852 716 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 487 614 1.3E-34 T 06-07-2017 IPR025299 CstA, C-terminal domain AM402_RS18730 be5a5a7813a56fd17b61d550b413c852 716 Pfam PF02554 Carbon starvation protein CstA 34 405 1.9E-161 T 06-07-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AM402_RS04905 06fb231c9f6a0c56b774f6c96cfd50cc 333 Gene3D G3DSA:1.10.3530.10 32 220 6.7E-66 T 06-07-2017 IPR023136 Api92-like domain AM402_RS04905 06fb231c9f6a0c56b774f6c96cfd50cc 333 Gene3D G3DSA:3.30.70.1270 221 300 6.6E-34 T 06-07-2017 AM402_RS04905 06fb231c9f6a0c56b774f6c96cfd50cc 333 Pfam PF06924 Protein of unknown function (DUF1281) 15 145 6.2E-47 T 06-07-2017 IPR009694 Protein of unknown function DUF1281 AM402_RS04905 06fb231c9f6a0c56b774f6c96cfd50cc 333 SUPERFAMILY SSF160940 3 307 4.84E-99 T 06-07-2017 AM402_RS06750 0d6311aa65e833e11ff248b169e49f0b 372 Gene3D G3DSA:3.30.1890.10 54 215 2.3E-53 T 06-07-2017 AM402_RS06750 0d6311aa65e833e11ff248b169e49f0b 372 SUPERFAMILY SSF160355 66 332 5.1E-77 T 06-07-2017 AM402_RS06750 0d6311aa65e833e11ff248b169e49f0b 372 Gene3D G3DSA:1.10.287.210 216 318 5.1E-37 T 06-07-2017 AM402_RS06750 0d6311aa65e833e11ff248b169e49f0b 372 Pfam PF02706 Chain length determinant protein 27 191 1.1E-18 T 06-07-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AM402_RS06725 5700a99c35b8815099e1dc5877446cbd 303 SUPERFAMILY SSF103481 39 142 2.75E-12 T 06-07-2017 AM402_RS06725 5700a99c35b8815099e1dc5877446cbd 303 Pfam PF00892 EamA-like transporter family 5 138 1.0E-16 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS06725 5700a99c35b8815099e1dc5877446cbd 303 SUPERFAMILY SSF103481 206 280 1.27E-6 T 06-07-2017 AM402_RS06725 5700a99c35b8815099e1dc5877446cbd 303 TIGRFAM TIGR00688 rarD: protein RarD 5 257 1.0E-54 T 06-07-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AM402_RS10525 fd3ccc0f582804997bcee28c41187424 669 Pfam PF13175 AAA ATPase domain 50 359 4.5E-20 T 06-07-2017 AM402_RS10525 fd3ccc0f582804997bcee28c41187424 669 Gene3D G3DSA:3.40.1140.10 269 363 9.8E-4 T 06-07-2017 AM402_RS01100 1d8314e6a5be18b2a99812bfe5518c75 288 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 205 215 - T 06-07-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01100 1d8314e6a5be18b2a99812bfe5518c75 288 Hamap MF_00258 Glutamate racemase [murI]. 26 278 34.144 T 06-07-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01100 1d8314e6a5be18b2a99812bfe5518c75 288 SUPERFAMILY SSF53681 28 130 1.5E-30 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01100 1d8314e6a5be18b2a99812bfe5518c75 288 Gene3D G3DSA:3.40.50.1860 25 196 7.6E-50 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01100 1d8314e6a5be18b2a99812bfe5518c75 288 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 06-07-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01100 1d8314e6a5be18b2a99812bfe5518c75 288 Pfam PF01177 Asp/Glu/Hydantoin racemase 30 240 1.6E-27 T 06-07-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01100 1d8314e6a5be18b2a99812bfe5518c75 288 SUPERFAMILY SSF53681 132 249 1.72E-31 T 06-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS01100 1d8314e6a5be18b2a99812bfe5518c75 288 TIGRFAM TIGR00067 glut_race: glutamate racemase 28 260 1.9E-79 T 06-07-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS13540 996eed13ec5b29f77ffeac00153dc2f6 167 Pfam PF00210 Ferritin-like domain 7 143 6.4E-40 T 06-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM402_RS13540 996eed13ec5b29f77ffeac00153dc2f6 167 Gene3D G3DSA:1.20.1260.10 1 161 8.4E-61 T 06-07-2017 IPR012347 Ferritin-related AM402_RS13540 996eed13ec5b29f77ffeac00153dc2f6 167 SUPERFAMILY SSF47240 1 159 3.42E-58 T 06-07-2017 IPR009078 Ferritin-like superfamily AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 SUPERFAMILY SSF82693 42 129 6.28E-23 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 SUPERFAMILY SSF82714 183 264 9.81E-17 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 Gene3D G3DSA:1.20.1640.10 290 496 2.3E-56 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 Gene3D G3DSA:3.30.2090.10 183 265 3.7E-19 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 Gene3D G3DSA:3.30.2090.10 699 783 4.6E-16 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 SUPERFAMILY SSF82866 297 489 3.01E-48 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 7.5E-268 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 Gene3D G3DSA:3.30.70.1430 42 140 7.4E-26 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.6E-70 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.6E-70 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.6E-70 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.6E-70 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-70 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.6E-70 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-70 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.6E-70 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 SUPERFAMILY SSF82866 784 1005 1.24E-43 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 Gene3D G3DSA:3.30.70.1430 557 650 3.4E-10 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 SUPERFAMILY SSF82693 267 323 7.33E-19 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 SUPERFAMILY SSF82693 138 181 7.33E-19 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 SUPERFAMILY SSF82714 699 784 1.19E-16 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 SUPERFAMILY SSF82693 553 650 3.14E-16 T 06-07-2017 AM402_RS04090 5fe55013570fd1d6a95e12bacb0cadcb 1025 Gene3D G3DSA:1.10.3850.10 791 1006 5.3E-57 T 06-07-2017 AM402_RS05870 807606a94bad74566c9ce94eb1d4bcab 116 Gene3D G3DSA:3.30.1130.10 1 114 2.9E-42 T 06-07-2017 AM402_RS05870 807606a94bad74566c9ce94eb1d4bcab 116 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.5E-31 T 06-07-2017 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS05870 807606a94bad74566c9ce94eb1d4bcab 116 TIGRFAM TIGR00526 folB_dom: FolB domain 1 114 4.3E-37 T 06-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS05870 807606a94bad74566c9ce94eb1d4bcab 116 SUPERFAMILY SSF55620 1 114 3.95E-36 T 06-07-2017 AM402_RS05870 807606a94bad74566c9ce94eb1d4bcab 116 Pfam PF02152 Dihydroneopterin aldolase 4 113 6.1E-33 T 06-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS05870 807606a94bad74566c9ce94eb1d4bcab 116 SMART SM00905 4 114 5.1E-46 T 06-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 429 9.8E-161 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 Pfam PF00815 Histidinol dehydrogenase 31 430 5.8E-165 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 Gene3D G3DSA:3.40.50.1980 33 243 2.4E-78 T 06-07-2017 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 7.3E-99 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 7.3E-99 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 7.3E-99 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PRINTS PR00083 Histidinol dehydrogenase signature 112 139 7.3E-99 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 7.3E-99 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 7.3E-99 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 7.3E-99 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 7.3E-99 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 06-07-2017 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 PIRSF PIRSF000099 2 433 1.6E-165 T 06-07-2017 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 10 430 39.948 T 06-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM402_RS15665 f8f1b09d41b4f477be8bfc745e75ec49 438 SUPERFAMILY SSF53720 11 432 9.61E-87 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS15635 3747c3e995a0cb01f0fb667b45d06d7e 454 SUPERFAMILY SSF143548 16 158 8.89E-45 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM402_RS15635 3747c3e995a0cb01f0fb667b45d06d7e 454 Pfam PF03315 Serine dehydratase beta chain 3 155 1.7E-56 T 06-07-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM402_RS15635 3747c3e995a0cb01f0fb667b45d06d7e 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 9.3E-220 T 06-07-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM402_RS15635 3747c3e995a0cb01f0fb667b45d06d7e 454 Gene3D G3DSA:3.30.1330.90 10 158 3.4E-54 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM402_RS15635 3747c3e995a0cb01f0fb667b45d06d7e 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.0E-96 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit AM402_RS04610 887fbe747b4d40c23af8c0e522945809 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 157 1.5E-12 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS04610 887fbe747b4d40c23af8c0e522945809 789 Gene3D G3DSA:2.40.170.20 323 789 3.5E-49 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS04610 887fbe747b4d40c23af8c0e522945809 789 Gene3D G3DSA:2.40.170.20 173 225 3.5E-49 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS04610 887fbe747b4d40c23af8c0e522945809 789 Gene3D G3DSA:2.170.130.10 29 160 1.2E-13 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS04610 887fbe747b4d40c23af8c0e522945809 789 SUPERFAMILY SSF56935 322 789 8.24E-63 T 06-07-2017 AM402_RS04610 887fbe747b4d40c23af8c0e522945809 789 SUPERFAMILY SSF56935 61 224 8.24E-63 T 06-07-2017 AM402_RS04610 887fbe747b4d40c23af8c0e522945809 789 Pfam PF00593 TonB dependent receptor 535 787 1.3E-15 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS09950 dc2f05bd199ee6a8f4865d6f3f2f32e4 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 450 3.9E-220 T 06-07-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM402_RS09950 dc2f05bd199ee6a8f4865d6f3f2f32e4 453 Gene3D G3DSA:3.30.1330.90 10 156 2.7E-53 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM402_RS09950 dc2f05bd199ee6a8f4865d6f3f2f32e4 453 SUPERFAMILY SSF143548 16 156 1.94E-44 T 06-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM402_RS09950 dc2f05bd199ee6a8f4865d6f3f2f32e4 453 Pfam PF03315 Serine dehydratase beta chain 3 154 5.1E-55 T 06-07-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM402_RS09950 dc2f05bd199ee6a8f4865d6f3f2f32e4 453 Pfam PF03313 Serine dehydratase alpha chain 183 447 9.8E-96 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit AM402_RS05700 9bcc77a3beeea37126bfaec1881654ca 237 Gene3D G3DSA:1.10.10.10 155 232 2.7E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS05700 9bcc77a3beeea37126bfaec1881654ca 237 Gene3D G3DSA:3.90.79.10 9 150 3.9E-37 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS05700 9bcc77a3beeea37126bfaec1881654ca 237 Pfam PF00293 NUDIX domain 28 147 4.3E-12 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS05700 9bcc77a3beeea37126bfaec1881654ca 237 SUPERFAMILY SSF55811 17 156 4.47E-30 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS05700 9bcc77a3beeea37126bfaec1881654ca 237 SUPERFAMILY SSF46785 166 233 2.99E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16120 6dd05b2da2094fb7b8a572ef68e0b70a 131 SUPERFAMILY SSF54637 1 130 4.69E-40 T 06-07-2017 IPR029069 HotDog domain AM402_RS16120 6dd05b2da2094fb7b8a572ef68e0b70a 131 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 123 5.0E-44 T 06-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM402_RS16120 6dd05b2da2094fb7b8a572ef68e0b70a 131 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 8 25 - T 06-07-2017 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 AM402_RS16120 6dd05b2da2094fb7b8a572ef68e0b70a 131 Pfam PF03061 Thioesterase superfamily 17 103 1.3E-17 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AM402_RS16120 6dd05b2da2094fb7b8a572ef68e0b70a 131 Gene3D G3DSA:3.10.129.10 2 128 1.9E-46 T 06-07-2017 IPR029069 HotDog domain AM402_RS16120 6dd05b2da2094fb7b8a572ef68e0b70a 131 PIRSF PIRSF003230 1 131 4.3E-47 T 06-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM402_RS16120 6dd05b2da2094fb7b8a572ef68e0b70a 131 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 3 128 1.2E-49 T 06-07-2017 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AM402_RS21960 a15fc8cbf02093c0f753a910ccaffd8e 178 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 99 109 - T 06-07-2017 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 AM402_RS21960 a15fc8cbf02093c0f753a910ccaffd8e 178 Gene3D G3DSA:3.90.190.10 96 127 6.9E-5 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like AM402_RS21960 a15fc8cbf02093c0f753a910ccaffd8e 178 SUPERFAMILY SSF52799 77 126 2.12E-6 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like AM402_RS06355 36225fcd11147b7c3de67b74a557aaf0 235 Gene3D G3DSA:2.40.30.70 4 158 4.5E-49 T 06-07-2017 IPR023370 TsaA-like domain AM402_RS06355 36225fcd11147b7c3de67b74a557aaf0 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 06-07-2017 IPR023368 Uncharacterised protein family UPF0066, conserved site AM402_RS06355 36225fcd11147b7c3de67b74a557aaf0 235 SUPERFAMILY SSF118196 1 230 5.49E-84 T 06-07-2017 IPR023370 TsaA-like domain AM402_RS06355 36225fcd11147b7c3de67b74a557aaf0 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.1E-39 T 06-07-2017 IPR023370 TsaA-like domain AM402_RS06355 36225fcd11147b7c3de67b74a557aaf0 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 147 6.6E-51 T 06-07-2017 IPR023370 TsaA-like domain AM402_RS04265 fc86c088fced4bed156de2e74bfaf4fc 184 Gene3D G3DSA:3.40.50.300 5 172 1.2E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04265 fc86c088fced4bed156de2e74bfaf4fc 184 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 171 3.9E-64 T 06-07-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AM402_RS04265 fc86c088fced4bed156de2e74bfaf4fc 184 Pfam PF01202 Shikimate kinase 17 171 2.5E-9 T 06-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM402_RS04265 fc86c088fced4bed156de2e74bfaf4fc 184 SUPERFAMILY SSF52540 9 172 2.09E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14790 95bbb0412a03f9d07d2ced50e043d46c 77 Gene3D G3DSA:1.20.58.250 13 74 2.8E-6 T 06-07-2017 IPR011326 Homologue of theta DNA polymerase III AM402_RS14790 95bbb0412a03f9d07d2ced50e043d46c 77 SUPERFAMILY SSF46575 12 73 1.13E-7 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS15915 a8bafb0261acdb83d32fa08473ba630d 153 Pfam PF02391 MoaE protein 10 122 5.6E-37 T 06-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15915 a8bafb0261acdb83d32fa08473ba630d 153 Gene3D G3DSA:3.90.1170.40 5 152 1.4E-54 T 06-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15915 a8bafb0261acdb83d32fa08473ba630d 153 SUPERFAMILY SSF54690 6 152 1.27E-51 T 06-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS20615 f824ee433e9685cd9cfa42cdfd6373b3 167 Gene3D G3DSA:3.40.630.30 10 124 2.2E-18 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS20615 f824ee433e9685cd9cfa42cdfd6373b3 167 Pfam PF13508 Acetyltransferase (GNAT) domain 47 123 1.6E-11 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS20615 f824ee433e9685cd9cfa42cdfd6373b3 167 SUPERFAMILY SSF55729 1 159 2.78E-28 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS18165 f6e9bac9f29882ab3dbb32ed822e1cd1 175 Gene3D G3DSA:2.60.40.1090 29 175 3.1E-45 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18165 f6e9bac9f29882ab3dbb32ed822e1cd1 175 Pfam PF00419 Fimbrial protein 33 175 6.7E-20 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18165 f6e9bac9f29882ab3dbb32ed822e1cd1 175 SUPERFAMILY SSF49401 30 175 1.04E-36 T 06-07-2017 IPR008966 Adhesion domain AM402_RS14415 e60f197b6ae4571b794649b838368a1d 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 4.1E-20 T 06-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS14415 e60f197b6ae4571b794649b838368a1d 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.314 T 06-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS14415 e60f197b6ae4571b794649b838368a1d 56 SUPERFAMILY SSF57829 2 55 6.71E-19 T 06-07-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM402_RS14415 e60f197b6ae4571b794649b838368a1d 56 Pfam PF01783 Ribosomal L32p protein family 2 56 4.0E-20 T 06-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03380 8d079a8bd165535ed115074cefb86427 535 PIRSF PIRSF002741 21 535 1.3E-118 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM402_RS03380 8d079a8bd165535ed115074cefb86427 535 SUPERFAMILY SSF53850 29 534 3.86E-160 T 06-07-2017 AM402_RS03380 8d079a8bd165535ed115074cefb86427 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 1.6E-107 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS03380 8d079a8bd165535ed115074cefb86427 535 Gene3D G3DSA:3.90.76.10 39 219 2.7E-48 T 06-07-2017 AM402_RS03380 8d079a8bd165535ed115074cefb86427 535 Gene3D G3DSA:3.10.105.10 288 505 3.4E-70 T 06-07-2017 AM402_RS03380 8d079a8bd165535ed115074cefb86427 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 06-07-2017 IPR023765 Solute-binding protein family 5, conserved site AM402_RS18005 c5f16d79c897aaed2bbf535fc2c688dd 185 SUPERFAMILY SSF49401 31 185 2.83E-25 T 06-07-2017 IPR008966 Adhesion domain AM402_RS18005 c5f16d79c897aaed2bbf535fc2c688dd 185 Pfam PF00419 Fimbrial protein 31 184 1.9E-12 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18005 c5f16d79c897aaed2bbf535fc2c688dd 185 Gene3D G3DSA:2.60.40.1090 29 185 7.8E-28 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS13825 cc710b08f96b031026a4eb7639adf51e 388 SUPERFAMILY SSF56563 108 381 1.23E-78 T 06-07-2017 AM402_RS13825 cc710b08f96b031026a4eb7639adf51e 388 Pfam PF05065 Phage capsid family 113 381 9.3E-55 T 06-07-2017 IPR024455 Phage capsid AM402_RS13825 cc710b08f96b031026a4eb7639adf51e 388 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 7 381 3.1E-58 T 06-07-2017 IPR006444 Phage major capsid protein, HK97 AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.7E-12 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.7E-12 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.7E-12 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 SUPERFAMILY SSF51735 4 257 1.79E-82 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 256 1.3E-60 T 06-07-2017 AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 4.6E-4 T 06-07-2017 AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 Gene3D G3DSA:3.40.50.720 2 257 4.9E-86 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.9E-40 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-40 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.9E-40 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.9E-40 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.9E-40 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.9E-40 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS07335 d273c6ec95fd281bb5a6ecceb12cf5c2 259 TIGRFAM TIGR02415 23BDH: acetoin reductases 6 259 7.1E-111 T 06-07-2017 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 AM402_RS02440 f5845fe1fa210f814e09f3fb8899024a 224 SUPERFAMILY SSF50800 3 222 4.6E-72 T 06-07-2017 IPR011037 Pyruvate kinase-like, insert domain AM402_RS02440 f5845fe1fa210f814e09f3fb8899024a 224 Gene3D G3DSA:2.40.33.20 4 223 1.6E-80 T 06-07-2017 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AM402_RS02440 f5845fe1fa210f814e09f3fb8899024a 224 Pfam PF03475 3-alpha domain 169 212 1.2E-16 T 06-07-2017 IPR005163 3-alpha domain AM402_RS02440 f5845fe1fa210f814e09f3fb8899024a 224 Pfam PF03473 MOSC domain 48 155 3.2E-21 T 06-07-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM402_RS15020 1ed7560073ac8e4e3bc8a95dfd53bb50 204 Pfam PF04993 TfoX N-terminal domain 16 104 1.1E-21 T 06-07-2017 IPR007076 TfoX, N-terminal AM402_RS15020 1ed7560073ac8e4e3bc8a95dfd53bb50 204 Pfam PF04994 TfoX C-terminal domain 117 196 2.4E-23 T 06-07-2017 IPR007077 TfoX, C-terminal AM402_RS15020 1ed7560073ac8e4e3bc8a95dfd53bb50 204 PIRSF PIRSF028788 6 204 4.6E-48 T 06-07-2017 IPR026256 Transcriptional regulator, TfoX/Sxy-type AM402_RS15020 1ed7560073ac8e4e3bc8a95dfd53bb50 204 Gene3D G3DSA:1.10.150.20 116 200 4.7E-27 T 06-07-2017 AM402_RS15020 1ed7560073ac8e4e3bc8a95dfd53bb50 204 SUPERFAMILY SSF159894 8 106 3.92E-24 T 06-07-2017 AM402_RS15020 1ed7560073ac8e4e3bc8a95dfd53bb50 204 Gene3D G3DSA:3.30.1460.30 6 105 6.3E-26 T 06-07-2017 IPR007076 TfoX, N-terminal AM402_RS06905 83fd01c9ab58959ce6edb228c039a4a3 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 59 1.0E-19 T 06-07-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) AM402_RS17630 5db0a9e2e7ceb6b9dc2dad02e990e93a 252 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 23 252 1.2E-95 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type AM402_RS17630 5db0a9e2e7ceb6b9dc2dad02e990e93a 252 Pfam PF14348 Domain of unknown function (DUF4400) 54 249 2.4E-73 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.6E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.6E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.6E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.6E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.6E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.6E-50 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.0E-168 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.483 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 Gene3D G3DSA:3.90.226.10 58 284 5.2E-51 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 SUPERFAMILY SSF52096 5 318 1.91E-106 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS06325 2066188350eb961d4ba422b8bfc0d741 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 150 7.6E-63 T 06-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AM402_RS15270 8c4c363e722c9ab917d956190200f945 345 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 25 331 1.1E-90 T 06-07-2017 IPR010732 Type VI secretion, TssG-like AM402_RS15270 8c4c363e722c9ab917d956190200f945 345 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 25 331 1.3E-91 T 06-07-2017 IPR010732 Type VI secretion, TssG-like AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 Pfam PF08281 Sigma-70, region 4 133 180 3.4E-18 T 06-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 Gene3D G3DSA:1.10.10.10 122 187 9.0E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 2.8E-97 T 06-07-2017 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 Gene3D G3DSA:1.10.1740.10 2 110 6.7E-35 T 06-07-2017 AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 SUPERFAMILY SSF88946 2 105 2.35E-29 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 SUPERFAMILY SSF88659 122 183 8.22E-18 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 9.2E-31 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 Pfam PF04542 Sigma-70 region 2 25 91 2.9E-16 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS08385 03f04d3c672f4fe2ddcf646d47af4888 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 06-07-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 Pfam PF00366 Ribosomal protein S17 10 76 8.2E-33 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 SUPERFAMILY SSF50249 5 82 9.85E-33 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 7.7E-13 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 7.7E-13 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 7.7E-13 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 Gene3D G3DSA:2.40.50.140 6 82 1.2E-35 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 06-07-2017 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 1.0E-32 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 3.7E-37 T 06-07-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00960 da89ff50bf3a418ba698935d188d7174 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 25.656 T 06-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01770 5b92b0c4fb952e480c595478a5c929d6 368 SUPERFAMILY SSF53756 5 365 2.22E-83 T 06-07-2017 AM402_RS01770 5b92b0c4fb952e480c595478a5c929d6 368 Pfam PF00534 Glycosyl transferases group 1 181 347 1.0E-37 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS01770 5b92b0c4fb952e480c595478a5c929d6 368 Pfam PF13439 Glycosyltransferase Family 4 14 172 2.0E-13 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM402_RS01770 5b92b0c4fb952e480c595478a5c929d6 368 Gene3D G3DSA:3.40.50.2000 164 347 1.3E-37 T 06-07-2017 AM402_RS04170 efac3adc7664a17b2e139601e32d1424 432 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 16 431 3.7E-127 T 06-07-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS04170 efac3adc7664a17b2e139601e32d1424 432 Gene3D G3DSA:3.40.50.300 85 353 2.9E-83 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04170 efac3adc7664a17b2e139601e32d1424 432 SMART SM00382 154 336 7.0E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS04170 efac3adc7664a17b2e139601e32d1424 432 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 06-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS04170 efac3adc7664a17b2e139601e32d1424 432 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 142 351 1.1E-71 T 06-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM402_RS04170 efac3adc7664a17b2e139601e32d1424 432 SUPERFAMILY SSF52540 85 356 7.62E-84 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16830 479fdb9f26a4fe94d45e5d909d6d7149 156 Gene3D G3DSA:3.40.1280.10 2 155 7.1E-53 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM402_RS16830 479fdb9f26a4fe94d45e5d909d6d7149 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 6.9E-47 T 06-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS16830 479fdb9f26a4fe94d45e5d909d6d7149 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.6E-80 T 06-07-2017 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS16830 479fdb9f26a4fe94d45e5d909d6d7149 156 SUPERFAMILY SSF75217 1 154 6.28E-49 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases AM402_RS16830 479fdb9f26a4fe94d45e5d909d6d7149 156 PIRSF PIRSF004505 1 155 2.0E-40 T 06-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS16830 479fdb9f26a4fe94d45e5d909d6d7149 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.71 T 06-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Gene3D G3DSA:3.40.50.10050 715 794 1.3E-23 T 06-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 913 17.732 T 06-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Pfam PF11987 Translation-initiation factor 2 700 805 1.6E-36 T 06-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 AM402_RS00130 8364f09975bc1def211e68425d738308 916 SUPERFAMILY SSF52540 403 583 3.47E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00130 8364f09975bc1def211e68425d738308 916 SUPERFAMILY SSF50447 589 670 7.95E-23 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS00130 8364f09975bc1def211e68425d738308 916 SUPERFAMILY SSF50447 816 913 1.22E-33 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS00130 8364f09975bc1def211e68425d738308 916 Gene3D G3DSA:2.40.30.10 588 679 6.9E-21 T 06-07-2017 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Gene3D G3DSA:3.40.50.300 413 575 8.3E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00130 8364f09975bc1def211e68425d738308 916 SUPERFAMILY SSF52156 693 822 1.1E-37 T 06-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 5 47 2.8E-7 T 06-07-2017 IPR006847 Translation initiation factor IF-2, N-terminal AM402_RS00130 8364f09975bc1def211e68425d738308 916 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 339 389 2.8E-15 T 06-07-2017 IPR006847 Translation initiation factor IF-2, N-terminal AM402_RS00130 8364f09975bc1def211e68425d738308 916 Gene3D G3DSA:2.40.30.10 817 914 2.9E-39 T 06-07-2017 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Gene3D G3DSA:3.30.56.50 2 50 2.5E-22 T 06-07-2017 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Pfam PF00009 Elongation factor Tu GTP binding domain 419 576 9.0E-36 T 06-07-2017 AM402_RS00130 8364f09975bc1def211e68425d738308 916 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 331 915 1.7E-291 T 06-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM402_RS00130 8364f09975bc1def211e68425d738308 916 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 418 574 7.6E-34 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Pfam PF03144 Elongation factor Tu domain 2 836 903 3.8E-7 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM402_RS00130 8364f09975bc1def211e68425d738308 916 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 59 97 3.2E-14 T 06-07-2017 IPR013575 Initiation factor 2 associated domain, bacterial AM402_RS00130 8364f09975bc1def211e68425d738308 916 SUPERFAMILY SSF46955 3 50 3.11E-12 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS00130 8364f09975bc1def211e68425d738308 916 ProSitePatterns PS01176 Initiation factor 2 signature. 866 888 - T 06-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM402_RS02205 a724f79c0b5797a09838d547fadea5a8 157 PRINTS PR00070 Dihydrofolate reductase signature 93 107 1.1E-11 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS02205 a724f79c0b5797a09838d547fadea5a8 157 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.1E-11 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS02205 a724f79c0b5797a09838d547fadea5a8 157 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.1E-11 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS02205 a724f79c0b5797a09838d547fadea5a8 157 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.1E-11 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS02205 a724f79c0b5797a09838d547fadea5a8 157 SUPERFAMILY SSF53597 2 156 5.76E-44 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS02205 a724f79c0b5797a09838d547fadea5a8 157 Gene3D G3DSA:3.40.430.10 2 156 3.5E-42 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS02205 a724f79c0b5797a09838d547fadea5a8 157 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 06-07-2017 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 AM402_RS02205 a724f79c0b5797a09838d547fadea5a8 157 Pfam PF00186 Dihydrofolate reductase 2 155 2.8E-38 T 06-07-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS12005 803117ea11497a5871c6e543d60e6d09 286 Pfam PF02811 PHP domain 13 115 9.7E-8 T 06-07-2017 IPR004013 PHP domain GO:0003824 AM402_RS12005 803117ea11497a5871c6e543d60e6d09 286 SMART SM00481 12 79 3.2E-19 T 06-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AM402_RS12005 803117ea11497a5871c6e543d60e6d09 286 SUPERFAMILY SSF89550 174 284 4.58E-52 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM402_RS12005 803117ea11497a5871c6e543d60e6d09 286 SUPERFAMILY SSF89550 11 92 4.58E-52 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM402_RS12005 803117ea11497a5871c6e543d60e6d09 286 Gene3D G3DSA:3.20.20.140 12 97 1.4E-43 T 06-07-2017 AM402_RS12005 803117ea11497a5871c6e543d60e6d09 286 Gene3D G3DSA:3.20.20.140 166 268 1.4E-43 T 06-07-2017 AM402_RS11800 cbda71cc890e87d379cd2bf4ca5bfa0d 262 PIRSF PIRSF000094 1 260 2.1E-124 T 06-07-2017 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS11800 cbda71cc890e87d379cd2bf4ca5bfa0d 262 Gene3D G3DSA:3.40.50.720 2 253 7.0E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS11800 cbda71cc890e87d379cd2bf4ca5bfa0d 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 9.8E-85 T 06-07-2017 AM402_RS11800 cbda71cc890e87d379cd2bf4ca5bfa0d 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS11800 cbda71cc890e87d379cd2bf4ca5bfa0d 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.5E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS11800 cbda71cc890e87d379cd2bf4ca5bfa0d 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.5E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS11800 cbda71cc890e87d379cd2bf4ca5bfa0d 262 SUPERFAMILY SSF51735 6 253 2.22E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS07280 4d3741553fbefea8fb4f64a3e2e8039d 144 Pfam PF04143 Sulphur transport 9 132 2.4E-7 T 06-07-2017 IPR007272 Sulphur transport domain AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 Gene3D G3DSA:3.40.50.1370 7 144 6.7E-52 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 2.2E-120 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 8.0E-29 T 06-07-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.9E-44 T 06-07-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.725 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 Gene3D G3DSA:3.40.50.1370 145 292 8.9E-54 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 SUPERFAMILY SSF53671 4 307 3.14E-100 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 5.9E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 5.9E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 5.9E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 5.9E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 5.9E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 5.9E-36 T 06-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.0E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 3.0E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 3.0E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS20560 4b6ed9f26125fe7827fe55b22d830cc1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 3.0E-25 T 06-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 Gene3D G3DSA:1.10.3730.10 162 268 2.2E-26 T 06-07-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 8.4E-70 T 06-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 Gene3D G3DSA:3.40.50.720 2 160 1.7E-46 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 2.0E-27 T 06-07-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 SUPERFAMILY SSF48179 163 271 9.86E-27 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 PIRSF PIRSF000193 3 271 1.6E-70 T 06-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 24.743 T 06-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 SUPERFAMILY SSF51735 4 160 2.46E-38 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS17340 632e9801c76d3fc1bfd20351f37e7076 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 7.1E-23 T 06-07-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AM402_RS04595 5292686fc4530ea41357639b0aa4b277 65 Pfam PF08388 Group II intron, maturase-specific domain 21 55 8.0E-6 T 06-07-2017 IPR013597 Group II intron, maturase-specific AM402_RS14505 0fd745ef8226ef152112672e5b68070e 373 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 34 372 3.4E-124 T 06-07-2017 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 AM402_RS14505 0fd745ef8226ef152112672e5b68070e 373 Pfam PF03601 Conserved hypothetical protein 698 35 350 5.4E-108 T 06-07-2017 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AM402_RS08565 4b886368cc9e62b937e74315885d99bc 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 06-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM402_RS08565 4b886368cc9e62b937e74315885d99bc 404 Pfam PF00266 Aminotransferase class-V 5 368 1.0E-87 T 06-07-2017 IPR000192 Aminotransferase class V domain AM402_RS08565 4b886368cc9e62b937e74315885d99bc 404 Gene3D G3DSA:3.40.640.10 17 254 9.7E-96 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS08565 4b886368cc9e62b937e74315885d99bc 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 9.7E-231 T 06-07-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM402_RS08565 4b886368cc9e62b937e74315885d99bc 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.72 T 06-07-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM402_RS08565 4b886368cc9e62b937e74315885d99bc 404 Gene3D G3DSA:3.90.1150.10 255 374 1.3E-51 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS08565 4b886368cc9e62b937e74315885d99bc 404 PIRSF PIRSF005572 2 384 5.4E-140 T 06-07-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM402_RS08565 4b886368cc9e62b937e74315885d99bc 404 SUPERFAMILY SSF53383 5 390 2.76E-115 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS09220 baa4bfbc87cffeb89e64332b6cbe509a 474 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 33 464 2.6E-112 T 06-07-2017 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AM402_RS09220 baa4bfbc87cffeb89e64332b6cbe509a 474 Gene3D G3DSA:3.30.300.30 374 468 3.0E-13 T 06-07-2017 AM402_RS09220 baa4bfbc87cffeb89e64332b6cbe509a 474 SUPERFAMILY SSF56801 12 471 2.09E-88 T 06-07-2017 AM402_RS09220 baa4bfbc87cffeb89e64332b6cbe509a 474 Gene3D G3DSA:2.30.38.10 310 370 1.7E-6 T 06-07-2017 AM402_RS09220 baa4bfbc87cffeb89e64332b6cbe509a 474 Gene3D G3DSA:3.40.50.980 159 309 6.2E-26 T 06-07-2017 AM402_RS09220 baa4bfbc87cffeb89e64332b6cbe509a 474 Gene3D G3DSA:3.40.50.980 13 158 3.2E-24 T 06-07-2017 AM402_RS09220 baa4bfbc87cffeb89e64332b6cbe509a 474 Pfam PF00501 AMP-binding enzyme 14 375 1.8E-52 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM402_RS09220 baa4bfbc87cffeb89e64332b6cbe509a 474 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 06-07-2017 IPR020845 AMP-binding, conserved site AM402_RS08180 ae4c6f281eaff97c7d0e6ffd4d4276c0 508 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 3 500 4.9E-122 T 06-07-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM402_RS08180 ae4c6f281eaff97c7d0e6ffd4d4276c0 508 Pfam PF02652 L-lactate permease 5 498 3.1E-125 T 06-07-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM402_RS17300 234d1bb5c171ac41475ce7b988325889 221 Pfam PF01323 DSBA-like thioredoxin domain 20 198 2.3E-7 T 06-07-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM402_RS17300 234d1bb5c171ac41475ce7b988325889 221 Gene3D G3DSA:1.10.472.60 78 178 2.5E-21 T 06-07-2017 IPR023169 UPF0413, central domain AM402_RS17300 234d1bb5c171ac41475ce7b988325889 221 Gene3D G3DSA:3.40.30.10 9 77 1.3E-22 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS17300 234d1bb5c171ac41475ce7b988325889 221 SUPERFAMILY SSF52833 14 198 2.61E-23 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS04915 73fef5ab78b69895741f598657611f0c 530 Gene3D G3DSA:2.40.10.200 413 527 2.4E-22 T 06-07-2017 AM402_RS04915 73fef5ab78b69895741f598657611f0c 530 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 37 247 7.2E-55 T 06-07-2017 IPR022391 Integrating conjugative element relaxase, PFGI-1 class AM402_RS04915 73fef5ab78b69895741f598657611f0c 530 Pfam PF07514 Putative helicase 37 247 1.4E-29 T 06-07-2017 IPR011119 Uncharacterised domain, helicase/relaxase, putative AM402_RS04915 73fef5ab78b69895741f598657611f0c 530 SUPERFAMILY SSF46785 395 527 6.26E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS04915 73fef5ab78b69895741f598657611f0c 530 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 396 486 2.3E-16 T 06-07-2017 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal AM402_RS10800 18f6216b1b5c86d25ca0564c803530e0 145 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 137 36.29 T 06-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM402_RS10800 18f6216b1b5c86d25ca0564c803530e0 145 SUPERFAMILY SSF51316 19 139 1.73E-55 T 06-07-2017 IPR011057 Mss4-like AM402_RS10800 18f6216b1b5c86d25ca0564c803530e0 145 Pfam PF01641 SelR domain 21 135 3.2E-51 T 06-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM402_RS10800 18f6216b1b5c86d25ca0564c803530e0 145 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 20 141 4.1E-57 T 06-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM402_RS10800 18f6216b1b5c86d25ca0564c803530e0 145 Gene3D G3DSA:2.170.150.20 20 140 3.8E-57 T 06-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.978 T 06-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 Gene3D G3DSA:3.65.10.10 22 237 2.0E-66 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 06-07-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 1.6E-143 T 06-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 5.0E-156 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 Gene3D G3DSA:3.65.10.10 238 422 1.0E-72 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 06-07-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 SUPERFAMILY SSF55205 1 423 1.96E-143 T 06-07-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM402_RS15430 f48b229ab68f9eebbb1b3832dc54fb7c 428 PIRSF PIRSF000505 2 427 2.2E-151 T 06-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM402_RS11040 c7b4235f4da0523624c0eab95093fbbb 154 Gene3D G3DSA:3.30.428.10 3 151 3.2E-25 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 AM402_RS11040 c7b4235f4da0523624c0eab95093fbbb 154 PRINTS PR00332 Histidine triad family signature 26 44 9.0E-7 T 06-07-2017 IPR001310 Histidine triad (HIT) protein AM402_RS11040 c7b4235f4da0523624c0eab95093fbbb 154 PRINTS PR00332 Histidine triad family signature 5 21 9.0E-7 T 06-07-2017 IPR001310 Histidine triad (HIT) protein AM402_RS11040 c7b4235f4da0523624c0eab95093fbbb 154 SUPERFAMILY SSF54197 2 150 7.89E-29 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 AM402_RS11040 c7b4235f4da0523624c0eab95093fbbb 154 Pfam PF01230 HIT domain 13 78 9.0E-10 T 06-07-2017 IPR001310 Histidine triad (HIT) protein AM402_RS21185 c9e023e561a4a68a05b9d9750fe101e2 341 Gene3D G3DSA:1.10.10.60 11 39 2.6E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS21185 c9e023e561a4a68a05b9d9750fe101e2 341 Pfam PF13936 Helix-turn-helix domain 2 39 5.6E-7 T 06-07-2017 IPR025246 Transposase IS30-like HTH domain AM402_RS21185 c9e023e561a4a68a05b9d9750fe101e2 341 SUPERFAMILY SSF53098 117 287 6.64E-17 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21185 c9e023e561a4a68a05b9d9750fe101e2 341 Gene3D G3DSA:3.30.420.10 117 287 3.5E-17 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21185 c9e023e561a4a68a05b9d9750fe101e2 341 Pfam PF00665 Integrase core domain 117 242 9.1E-25 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS05095 c879260dc11c3a1446bb9421e39a98bb 327 SUPERFAMILY SSF161098 99 312 7.52E-17 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS05095 c879260dc11c3a1446bb9421e39a98bb 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 323 4.5E-34 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS05095 c879260dc11c3a1446bb9421e39a98bb 327 Gene3D G3DSA:1.10.3720.10 98 321 9.2E-15 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS13805 f8b0e79b1ff6ac3e0479a71b332953c9 113 Pfam PF11367 Protein of unknown function (DUF3168) 5 85 1.8E-9 T 06-07-2017 IPR021508 Protein of unknown function DUF3168 AM402_RS14390 7babd26bcc19a8de54ee89eed670cc94 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 75 0.003 T 06-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS14390 7babd26bcc19a8de54ee89eed670cc94 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 06-07-2017 IPR006162 Phosphopantetheine attachment site AM402_RS14390 7babd26bcc19a8de54ee89eed670cc94 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 9.7E-17 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS14390 7babd26bcc19a8de54ee89eed670cc94 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.489 T 06-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS14390 7babd26bcc19a8de54ee89eed670cc94 78 SUPERFAMILY SSF47336 2 75 1.57E-22 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS14390 7babd26bcc19a8de54ee89eed670cc94 78 Gene3D G3DSA:1.10.1200.10 4 75 1.1E-34 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS14390 7babd26bcc19a8de54ee89eed670cc94 78 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0078 T 06-07-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM402_RS14390 7babd26bcc19a8de54ee89eed670cc94 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 3.4E-36 T 06-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 PIRSF PIRSF002799 1 770 0.0 T 06-07-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 Gene3D G3DSA:1.10.3810.10 156 332 1.2E-64 T 06-07-2017 AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 Gene3D G3DSA:3.30.2060.10 63 152 6.7E-31 T 06-07-2017 AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 20 746 0.0 T 06-07-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 Gene3D G3DSA:3.40.710.10 333 724 1.3E-104 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 SUPERFAMILY SSF56601 314 336 3.02E-105 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 SUPERFAMILY SSF56601 364 740 3.02E-105 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 SUPERFAMILY SSF53955 149 356 2.73E-65 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 678 7.6E-21 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 Pfam PF14814 Bifunctional transglycosylase second domain 65 149 3.5E-27 T 06-07-2017 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 Pfam PF00912 Transglycosylase 160 332 1.5E-56 T 06-07-2017 IPR001264 Glycosyl transferase, family 51 AM402_RS18455 6607f45a07f5aa755c056f8b42b07084 770 Gene3D G3DSA:1.20.5.100 9 48 3.1E-18 T 06-07-2017 AM402_RS08875 1b33030d3764c7815225913793d100a4 98 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 5 98 3.1E-39 T 06-07-2017 IPR005272 Conserved hypothetical protein CHP00743 AM402_RS08875 1b33030d3764c7815225913793d100a4 98 Gene3D G3DSA:3.30.70.860 27 98 7.2E-33 T 06-07-2017 AM402_RS08875 1b33030d3764c7815225913793d100a4 98 Pfam PF04175 Protein of unknown function (DUF406) 8 98 2.2E-39 T 06-07-2017 IPR005272 Conserved hypothetical protein CHP00743 AM402_RS15975 738d56cf260550fb79ceb3bded6bf13e 329 Gene3D G3DSA:2.130.10.10 2 327 5.0E-72 T 06-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM402_RS15975 738d56cf260550fb79ceb3bded6bf13e 329 SUPERFAMILY SSF50974 72 326 2.35E-38 T 06-07-2017 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM402_RS15975 738d56cf260550fb79ceb3bded6bf13e 329 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 325 3.7E-76 T 06-07-2017 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 402 41.349 T 06-07-2017 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 Gene3D G3DSA:1.20.1250.20 214 401 2.8E-29 T 06-07-2017 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 Gene3D G3DSA:1.20.1250.20 11 193 6.5E-42 T 06-07-2017 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 Pfam PF07690 Major Facilitator Superfamily 17 259 8.4E-38 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 PRINTS PR01035 Tetracycline resistance protein signature 112 133 2.0E-13 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 PRINTS PR01035 Tetracycline resistance protein signature 346 369 2.0E-13 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 PRINTS PR01035 Tetracycline resistance protein signature 85 109 2.0E-13 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 PRINTS PR01035 Tetracycline resistance protein signature 23 39 2.0E-13 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 PRINTS PR01035 Tetracycline resistance protein signature 142 164 2.0E-13 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS09505 5e2dcf564b9c58aebab51e27f82b0b84 402 SUPERFAMILY SSF103473 1 401 2.79E-74 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS00180 02eb24b78297559d6556a90ca46af9cc 97 SMART SM01103 3 86 1.2E-38 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AM402_RS00180 02eb24b78297559d6556a90ca46af9cc 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 3.8E-34 T 06-07-2017 IPR017924 RNA-binding protein YhbY GO:0003723 AM402_RS00180 02eb24b78297559d6556a90ca46af9cc 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 6.5E-21 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AM402_RS00180 02eb24b78297559d6556a90ca46af9cc 97 Gene3D G3DSA:3.30.110.60 1 94 1.2E-31 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AM402_RS00180 02eb24b78297559d6556a90ca46af9cc 97 SUPERFAMILY SSF75471 1 95 8.24E-30 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AM402_RS00180 02eb24b78297559d6556a90ca46af9cc 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 6.0E-34 T 06-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AM402_RS15970 66575764611296d54313f9b6e5f27122 425 PIRSF PIRSF000521 30 423 3.7E-30 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM402_RS15970 66575764611296d54313f9b6e5f27122 425 Pfam PF00202 Aminotransferase class-III 26 421 9.2E-132 T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM402_RS15970 66575764611296d54313f9b6e5f27122 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 50.807 T 06-07-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM402_RS15970 66575764611296d54313f9b6e5f27122 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 5.0E-186 T 06-07-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM402_RS15970 66575764611296d54313f9b6e5f27122 425 SUPERFAMILY SSF53383 1 421 3.98E-139 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS15970 66575764611296d54313f9b6e5f27122 425 Gene3D G3DSA:3.90.1150.10 2 61 2.5E-62 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS15970 66575764611296d54313f9b6e5f27122 425 Gene3D G3DSA:3.90.1150.10 332 422 2.5E-62 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS15970 66575764611296d54313f9b6e5f27122 425 Gene3D G3DSA:3.40.640.10 62 329 1.3E-93 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS15970 66575764611296d54313f9b6e5f27122 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 06-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM402_RS04740 7e8ad080b3040ecbf4e903cfa1d75889 742 Gene3D G3DSA:3.40.50.300 183 286 5.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04740 7e8ad080b3040ecbf4e903cfa1d75889 742 Gene3D G3DSA:3.40.50.300 468 681 5.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04740 7e8ad080b3040ecbf4e903cfa1d75889 742 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 34 680 4.0E-264 T 06-07-2017 IPR022458 Conjugative coupling factor TraG/TraD AM402_RS04740 7e8ad080b3040ecbf4e903cfa1d75889 742 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 34 680 0.0 T 06-07-2017 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 AM402_RS04740 7e8ad080b3040ecbf4e903cfa1d75889 742 SUPERFAMILY SSF52540 169 370 8.3E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04740 7e8ad080b3040ecbf4e903cfa1d75889 742 SUPERFAMILY SSF52540 422 678 8.3E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04740 7e8ad080b3040ecbf4e903cfa1d75889 742 Pfam PF12696 TraM recognition site of TraD and TraG 531 660 8.5E-12 T 06-07-2017 IPR032689 TraD/TraG, TraM recognition site AM402_RS16440 1d78f49f36907dda6ddd7cd904821e28 251 SUPERFAMILY SSF49373 162 248 5.18E-10 T 06-07-2017 IPR008964 Invasin/intimin cell-adhesion fragments AM402_RS16440 1d78f49f36907dda6ddd7cd904821e28 251 Gene3D G3DSA:2.60.40.1080 163 249 8.2E-14 T 06-07-2017 AM402_RS16440 1d78f49f36907dda6ddd7cd904821e28 251 SMART SM00635 165 245 5.1E-19 T 06-07-2017 IPR003343 Bacterial Ig-like, group 2 AM402_RS16440 1d78f49f36907dda6ddd7cd904821e28 251 Pfam PF02368 Bacterial Ig-like domain (group 2) 166 246 1.5E-15 T 06-07-2017 IPR003343 Bacterial Ig-like, group 2 AM402_RS01805 b011c963b3f77178b18a35004e438491 402 Gene3D G3DSA:3.40.50.10300 187 401 1.0E-91 T 06-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM402_RS01805 b011c963b3f77178b18a35004e438491 402 Gene3D G3DSA:3.40.50.1950 4 186 4.3E-61 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM402_RS01805 b011c963b3f77178b18a35004e438491 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 394 2.5E-159 T 06-07-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 AM402_RS01805 b011c963b3f77178b18a35004e438491 402 SUPERFAMILY SSF52507 2 179 3.79E-57 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM402_RS01805 b011c963b3f77178b18a35004e438491 402 Pfam PF02441 Flavoprotein 7 135 1.4E-30 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM402_RS01805 b011c963b3f77178b18a35004e438491 402 SUPERFAMILY SSF102645 185 399 1.96E-82 T 06-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM402_RS01805 b011c963b3f77178b18a35004e438491 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 370 1.2E-75 T 06-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM402_RS18770 3fa8d5f51cf6c2576eb96c727e2ae749 117 SUPERFAMILY SSF75169 1 117 1.44E-32 T 06-07-2017 IPR027396 DsrEFH-like AM402_RS18770 3fa8d5f51cf6c2576eb96c727e2ae749 117 Gene3D G3DSA:3.40.1260.10 1 117 6.3E-42 T 06-07-2017 IPR027396 DsrEFH-like AM402_RS18770 3fa8d5f51cf6c2576eb96c727e2ae749 117 Pfam PF02635 DsrE/DsrF-like family 3 117 1.5E-20 T 06-07-2017 IPR003787 Sulphur relay, DsrE/F-like protein AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 Gene3D G3DSA:1.10.1060.10 6 149 1.5E-45 T 06-07-2017 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 Gene3D G3DSA:3.50.50.60 237 393 1.7E-44 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 464 1.4E-233 T 06-07-2017 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 SUPERFAMILY SSF51971 145 394 1.12E-65 T 06-07-2017 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 132 3.8E-38 T 06-07-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 452 4.7E-24 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.8E-36 T 06-07-2017 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 3.8E-36 T 06-07-2017 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 3.8E-36 T 06-07-2017 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.8E-36 T 06-07-2017 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.8E-36 T 06-07-2017 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 SUPERFAMILY SSF46548 7 157 1.46E-40 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 Gene3D G3DSA:3.40.50.720 150 236 4.2E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS19630 43c53edcc8e99c9d8d8bd8458ebf2e9b 465 Gene3D G3DSA:3.40.50.720 394 463 4.2E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 06-07-2017 IPR033135 ClpP, histidine active site AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 Gene3D G3DSA:3.90.226.10 16 205 4.2E-91 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.074 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 06-07-2017 IPR018215 ClpP, Ser active site AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 3.4E-53 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 3.4E-53 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 3.4E-53 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 3.4E-53 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 3.4E-53 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 SUPERFAMILY SSF52096 23 206 3.04E-75 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 Pfam PF00574 Clp protease 25 205 5.8E-90 T 06-07-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM402_RS18870 455f5d21726a8406f0b6df635d07f002 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 204 6.8E-110 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS18595 ff7183e229f97de2487f976067cbb549 183 SUPERFAMILY SSF54862 3 161 6.8E-60 T 06-07-2017 AM402_RS18595 ff7183e229f97de2487f976067cbb549 183 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS18595 ff7183e229f97de2487f976067cbb549 183 Gene3D G3DSA:3.30.70.20 131 180 8.2E-14 T 06-07-2017 AM402_RS18595 ff7183e229f97de2487f976067cbb549 183 Gene3D G3DSA:3.30.70.20 4 59 6.8E-13 T 06-07-2017 AM402_RS18595 ff7183e229f97de2487f976067cbb549 183 Gene3D G3DSA:3.30.70.20 60 93 6.1E-12 T 06-07-2017 AM402_RS18595 ff7183e229f97de2487f976067cbb549 183 Pfam PF13247 4Fe-4S dicluster domain 53 145 5.7E-28 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS18595 ff7183e229f97de2487f976067cbb549 183 Gene3D G3DSA:3.30.70.20 94 130 4.4E-16 T 06-07-2017 AM402_RS06160 fabaf3307a7832e19795f7bba446fcfc 404 Gene3D G3DSA:3.90.1150.10 281 394 3.4E-20 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS06160 fabaf3307a7832e19795f7bba446fcfc 404 Gene3D G3DSA:3.40.640.10 34 280 2.1E-69 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS06160 fabaf3307a7832e19795f7bba446fcfc 404 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 402 1.8E-196 T 06-07-2017 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM402_RS06160 fabaf3307a7832e19795f7bba446fcfc 404 SUPERFAMILY SSF53383 7 394 9.18E-103 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS06160 fabaf3307a7832e19795f7bba446fcfc 404 Pfam PF00266 Aminotransferase class-V 21 389 9.9E-125 T 06-07-2017 IPR000192 Aminotransferase class V domain AM402_RS06160 fabaf3307a7832e19795f7bba446fcfc 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 06-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 Gene3D G3DSA:3.40.190.10 90 175 2.3E-18 T 06-07-2017 AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 Gene3D G3DSA:3.40.190.10 176 266 5.2E-33 T 06-07-2017 AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 Pfam PF03466 LysR substrate binding domain 88 293 1.2E-50 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.0E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 SUPERFAMILY SSF46785 1 111 9.08E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 SUPERFAMILY SSF53850 89 296 2.17E-44 T 06-07-2017 AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS01130 feaba37f49f14e8d981551477c1a2ddb 305 Gene3D G3DSA:1.10.10.10 1 82 2.6E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14405 7b7d05760ee585ca8eef687fd13335d2 317 Gene3D G3DSA:3.40.47.10 161 316 1.8E-52 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS14405 7b7d05760ee585ca8eef687fd13335d2 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 4.0E-143 T 06-07-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM402_RS14405 7b7d05760ee585ca8eef687fd13335d2 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 3.8E-36 T 06-07-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM402_RS14405 7b7d05760ee585ca8eef687fd13335d2 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.4E-31 T 06-07-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM402_RS14405 7b7d05760ee585ca8eef687fd13335d2 317 Gene3D G3DSA:3.40.47.10 1 160 1.7E-62 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS14405 7b7d05760ee585ca8eef687fd13335d2 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.372 T 06-07-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM402_RS14405 7b7d05760ee585ca8eef687fd13335d2 317 SUPERFAMILY SSF53901 4 317 6.05E-69 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS02030 bd3a2a539a3d32644d891c4dcc3c3560 549 SUPERFAMILY SSF53649 260 450 2.88E-10 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS02030 bd3a2a539a3d32644d891c4dcc3c3560 549 Pfam PF00884 Sulfatase 257 452 1.3E-14 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM402_RS02030 bd3a2a539a3d32644d891c4dcc3c3560 549 Gene3D G3DSA:3.40.720.10 263 451 1.4E-5 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS07130 895adea8193de324cadfcf560886f455 144 SUPERFAMILY SSF53062 1 129 6.15E-38 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM402_RS07130 895adea8193de324cadfcf560886f455 144 Gene3D G3DSA:3.40.50.510 1 134 4.7E-43 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM402_RS07130 895adea8193de324cadfcf560886f455 144 Pfam PF03610 PTS system fructose IIA component 3 114 1.2E-27 T 06-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AM402_RS21230 3f31e5daa544cf56d872bbdc42f6d05c 242 Gene3D G3DSA:1.25.40.10 180 217 8.2E-4 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS16525 9813b7b929396b9396a0f4bb8adb00ac 173 Pfam PF07274 Protein of unknown function (DUF1440) 27 156 5.0E-44 T 06-07-2017 IPR009898 Protein of unknown function DUF1440 AM402_RS13885 9813b7b929396b9396a0f4bb8adb00ac 173 Pfam PF07274 Protein of unknown function (DUF1440) 27 156 5.0E-44 T 06-07-2017 IPR009898 Protein of unknown function DUF1440 AM402_RS21250 21acf79f5b198a3a99d35068f73e7144 314 Pfam PF00437 Type II/IV secretion system protein 22 288 9.2E-63 T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM402_RS21250 21acf79f5b198a3a99d35068f73e7144 314 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 22 308 3.1E-98 T 06-07-2017 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 AM402_RS21250 21acf79f5b198a3a99d35068f73e7144 314 Gene3D G3DSA:3.30.450.90 19 113 7.9E-13 T 06-07-2017 AM402_RS21250 21acf79f5b198a3a99d35068f73e7144 314 Gene3D G3DSA:3.40.50.300 117 301 4.8E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21250 21acf79f5b198a3a99d35068f73e7144 314 SUPERFAMILY SSF52540 20 261 6.46E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15640 4d45202609919e4d388b5632aee98d4a 556 Gene3D G3DSA:3.10.410.10 443 532 3.2E-40 T 06-07-2017 AM402_RS15640 4d45202609919e4d388b5632aee98d4a 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 47.303 T 06-07-2017 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AM402_RS15640 4d45202609919e4d388b5632aee98d4a 556 SUPERFAMILY SSF52540 4 554 5.67E-241 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15640 4d45202609919e4d388b5632aee98d4a 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 06-07-2017 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AM402_RS15640 4d45202609919e4d388b5632aee98d4a 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 2.9E-265 T 06-07-2017 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AM402_RS15640 4d45202609919e4d388b5632aee98d4a 556 Gene3D G3DSA:3.40.50.300 15 128 9.5E-143 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15640 4d45202609919e4d388b5632aee98d4a 556 Gene3D G3DSA:3.40.50.300 248 441 9.5E-143 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15640 4d45202609919e4d388b5632aee98d4a 556 Gene3D G3DSA:3.30.1510.10 129 246 7.8E-54 T 06-07-2017 AM402_RS20460 d88c415e8e1ad7df03223592946bd8d1 203 SUPERFAMILY SSF75620 2 189 3.53E-45 T 06-07-2017 AM402_RS20460 d88c415e8e1ad7df03223592946bd8d1 203 Pfam PF00472 RF-1 domain 100 177 2.2E-22 T 06-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM402_RS20460 d88c415e8e1ad7df03223592946bd8d1 203 Gene3D G3DSA:3.30.160.20 99 171 3.3E-27 T 06-07-2017 IPR014720 Double-stranded RNA-binding domain AM402_RS20460 d88c415e8e1ad7df03223592946bd8d1 203 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 112 128 - T 06-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM402_RS20460 d88c415e8e1ad7df03223592946bd8d1 203 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 1 198 1.5E-79 T 06-07-2017 IPR017509 Putative peptide chain release factor H AM402_RS11820 6d92b0edefc94f6f29cbf95d5a2f4279 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 2.0E-41 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS11820 6d92b0edefc94f6f29cbf95d5a2f4279 321 Gene3D G3DSA:1.10.3720.10 67 141 1.4E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS11820 6d92b0edefc94f6f29cbf95d5a2f4279 321 Gene3D G3DSA:1.10.3720.10 181 305 1.4E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS11820 6d92b0edefc94f6f29cbf95d5a2f4279 321 SUPERFAMILY SSF161098 69 138 7.59E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS11820 6d92b0edefc94f6f29cbf95d5a2f4279 321 SUPERFAMILY SSF161098 178 300 7.59E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 26 42 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 269 284 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 342 355 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 61 79 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 252 267 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 156 167 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 121 133 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 290 307 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 PRINTS PR00992 Alanine racemase signature 194 221 1.2E-72 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 Pfam PF00842 Alanine racemase, C-terminal domain 236 358 4.4E-37 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 Pfam PF01168 Alanine racemase, N-terminal domain 8 221 1.1E-69 T 06-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 Hamap MF_01201 Alanine racemase. 1 360 34.675 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 SUPERFAMILY SSF51419 8 237 2.62E-65 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 06-07-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 TIGRFAM TIGR00492 alr: alanine racemase 3 361 1.4E-135 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 Gene3D G3DSA:2.40.37.10 212 362 5.8E-53 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 SMART SM01005 236 360 1.0E-60 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 Gene3D G3DSA:3.20.20.10 11 211 5.7E-71 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS03920 aea2369ef8ba600af55bc2ea5482d3d4 363 SUPERFAMILY SSF50621 229 361 6.28E-44 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS16625 52fa07786dd9c6a0ccff1a9d949fc123 111 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 9 109 6.9E-23 T 06-07-2017 IPR014054 Bacteriophage regulatory protein, Rha family AM402_RS16625 52fa07786dd9c6a0ccff1a9d949fc123 111 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 21 109 2.2E-24 T 06-07-2017 IPR014054 Bacteriophage regulatory protein, Rha family AM402_RS19795 3dab83bbace7a397f003c17d3a65771c 186 PIRSF PIRSF016183 13 186 5.5E-70 T 06-07-2017 IPR006839 Ribosome-associated, YjgA AM402_RS19795 3dab83bbace7a397f003c17d3a65771c 186 SUPERFAMILY SSF158710 41 183 2.48E-50 T 06-07-2017 AM402_RS19795 3dab83bbace7a397f003c17d3a65771c 186 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 20 184 23.352 T 06-07-2017 IPR006839 Ribosome-associated, YjgA AM402_RS19795 3dab83bbace7a397f003c17d3a65771c 186 Pfam PF04751 Protein of unknown function (DUF615) 30 180 3.8E-55 T 06-07-2017 IPR006839 Ribosome-associated, YjgA AM402_RS19795 3dab83bbace7a397f003c17d3a65771c 186 Gene3D G3DSA:1.10.60.30 40 114 2.9E-30 T 06-07-2017 IPR023153 PSPTO4464-like domain AM402_RS19795 3dab83bbace7a397f003c17d3a65771c 186 Gene3D G3DSA:1.10.60.30 117 185 1.5E-28 T 06-07-2017 IPR023153 PSPTO4464-like domain AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 Gene3D G3DSA:1.20.200.10 102 369 3.7E-53 T 06-07-2017 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 SMART SM00998 362 441 8.4E-17 T 06-07-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 Gene3D G3DSA:1.10.275.10 14 101 5.5E-27 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 SUPERFAMILY SSF48557 17 438 6.91E-84 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 Gene3D G3DSA:1.10.40.30 370 438 3.2E-18 T 06-07-2017 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 PRINTS PR00145 Argininosuccinate lyase family signature 139 159 5.7E-7 T 06-07-2017 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 5.7E-7 T 06-07-2017 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 PRINTS PR00145 Argininosuccinate lyase family signature 274 290 5.7E-7 T 06-07-2017 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 ProSitePatterns PS00163 Fumarate lyases signature. 274 283 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 Pfam PF10397 Adenylosuccinate lyase C-terminus 363 438 1.0E-11 T 06-07-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 PRINTS PR00149 Fumarate lyase superfamily signature 274 290 5.3E-10 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 PRINTS PR00149 Fumarate lyase superfamily signature 144 162 5.3E-10 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS02735 5151810ba78ccfa5bfa8c3cba41ef659 456 Pfam PF00206 Lyase 28 285 5.3E-31 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Gene3D G3DSA:3.40.50.140 1 148 7.5E-41 T 06-07-2017 IPR006171 Toprim domain AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 636 669 4.3E-4 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 684 725 2.5E-8 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Gene3D G3DSA:2.70.20.10 213 246 2.1E-35 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Gene3D G3DSA:2.70.20.10 361 490 2.1E-35 T 06-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Pfam PF01751 Toprim domain 3 119 1.0E-14 T 06-07-2017 IPR006171 Toprim domain AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Pfam PF01131 DNA topoisomerase 151 595 3.8E-123 T 06-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 SUPERFAMILY SSF56712 1 609 1.05E-173 T 06-07-2017 IPR023405 DNA topoisomerase, type IA, core domain AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Gene3D G3DSA:3.30.65.10 680 726 8.7E-6 T 06-07-2017 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 06-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 1.4E-20 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 1.4E-20 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 188 206 1.4E-20 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 524 538 1.4E-20 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 1.4E-20 T 06-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 SMART SM00436 123 218 2.4E-27 T 06-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Gene3D G3DSA:1.10.460.10 153 212 1.5E-49 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 Gene3D G3DSA:1.10.460.10 493 610 1.5E-49 T 06-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 SUPERFAMILY SSF57783 683 727 1.24E-5 T 06-07-2017 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 661 6.7E-205 T 06-07-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 SMART SM00493 1 123 2.3E-17 T 06-07-2017 IPR006171 Toprim domain AM402_RS20985 20965f47dbe37def4eaf21d928ee0e19 730 SMART SM00437 271 561 6.7E-59 T 06-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM402_RS08700 aef93534d1a039e307d683ca7be952f7 280 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 18 275 1.7E-115 T 06-07-2017 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AM402_RS08700 aef93534d1a039e307d683ca7be952f7 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 6.2E-16 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS08700 aef93534d1a039e307d683ca7be952f7 280 SUPERFAMILY SSF161098 16 268 9.16E-54 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS08700 aef93534d1a039e307d683ca7be952f7 280 Gene3D G3DSA:1.10.3720.10 22 268 9.3E-50 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS08700 aef93534d1a039e307d683ca7be952f7 280 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 274 2.9E-105 T 06-07-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 Gene3D G3DSA:3.40.50.2300 513 574 1.2E-55 T 06-07-2017 AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 Gene3D G3DSA:3.40.50.2300 275 345 1.2E-55 T 06-07-2017 AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 Gene3D G3DSA:3.40.50.2300 170 198 1.2E-55 T 06-07-2017 AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 Gene3D G3DSA:3.40.50.2300 346 512 1.4E-52 T 06-07-2017 AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 Pfam PF04348 LppC putative lipoprotein 44 197 1.6E-24 T 06-07-2017 IPR007443 Penicillin-binding protein activator LpoA AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 Pfam PF04348 LppC putative lipoprotein 273 581 4.7E-75 T 06-07-2017 IPR007443 Penicillin-binding protein activator LpoA AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 SUPERFAMILY SSF53822 170 198 6.71E-74 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 SUPERFAMILY SSF53822 434 586 6.71E-74 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS19550 d070d3fcfce8cfb22c2e89fb5ba5b82c 588 SUPERFAMILY SSF53822 275 405 6.71E-74 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS15395 2cdae101466c75041a50e755fd324fc7 71 Pfam PF00313 'Cold-shock' DNA-binding domain 7 70 1.1E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS15395 2cdae101466c75041a50e755fd324fc7 71 Gene3D G3DSA:2.40.50.140 7 68 5.2E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15395 2cdae101466c75041a50e755fd324fc7 71 PIRSF PIRSF002599 1 71 6.6E-17 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 AM402_RS15395 2cdae101466c75041a50e755fd324fc7 71 SUPERFAMILY SSF50249 5 69 2.33E-15 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15395 2cdae101466c75041a50e755fd324fc7 71 SMART SM00357 7 71 2.9E-7 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS15395 2cdae101466c75041a50e755fd324fc7 71 PRINTS PR00050 Cold shock protein signature 8 23 1.2E-10 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS15395 2cdae101466c75041a50e755fd324fc7 71 PRINTS PR00050 Cold shock protein signature 44 62 1.2E-10 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS15395 2cdae101466c75041a50e755fd324fc7 71 PRINTS PR00050 Cold shock protein signature 29 38 1.2E-10 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 SUPERFAMILY SSF50156 224 345 3.33E-16 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 Gene3D G3DSA:3.90.226.10 340 538 2.3E-63 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 Gene3D G3DSA:3.90.226.10 655 672 2.3E-63 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 Gene3D G3DSA:2.30.42.10 257 339 1.1E-21 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 246 324 3.0E-14 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 SMART SM00245 331 536 6.6E-73 T 06-07-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 SMART SM00228 251 328 5.2E-11 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 538 676 5.8E-41 T 06-07-2017 IPR020992 Tail specific protease, C-terminal AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 206 555 4.9E-116 T 06-07-2017 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 Pfam PF03572 Peptidase family S41 361 533 2.3E-51 T 06-07-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 Gene3D G3DSA:3.30.750.44 199 256 4.2E-5 T 06-07-2017 AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 SUPERFAMILY SSF52096 355 551 2.49E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS13495 b7cd8830011581c603f011215a5e5cc5 686 SUPERFAMILY SSF52096 183 269 2.49E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS00835 f28ae1e20e87d30b3e28caf3413fb066 386 SUPERFAMILY SSF102405 76 282 2.59E-40 T 06-07-2017 AM402_RS00835 f28ae1e20e87d30b3e28caf3413fb066 386 Pfam PF02481 DNA recombination-mediator protein A 67 272 3.6E-75 T 06-07-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 AM402_RS00835 f28ae1e20e87d30b3e28caf3413fb066 386 Gene3D G3DSA:3.40.50.450 108 251 7.0E-12 T 06-07-2017 AM402_RS00835 f28ae1e20e87d30b3e28caf3413fb066 386 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 281 4.6E-78 T 06-07-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 SUPERFAMILY SSF54893 2 100 1.96E-35 T 06-07-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.307 T 06-07-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-35 T 06-07-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 SUPERFAMILY SSF57825 102 150 7.19E-14 T 06-07-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 104 149 2.3E-17 T 06-07-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 8.4E-32 T 06-07-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 Gene3D G3DSA:3.30.70.140 2 98 9.1E-38 T 06-07-2017 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 Gene3D G3DSA:2.30.30.20 103 151 2.8E-20 T 06-07-2017 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AM402_RS20565 9062dd63123535e556ecbdf6ced83741 152 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 3.9E-61 T 06-07-2017 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.452 T 06-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 Gene3D G3DSA:2.40.30.10 209 298 2.3E-37 T 06-07-2017 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 SUPERFAMILY SSF50465 298 393 3.17E-36 T 06-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.7E-14 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 SUPERFAMILY SSF52540 6 219 1.2E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 Gene3D G3DSA:2.40.30.10 301 393 4.7E-47 T 06-07-2017 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 8.2E-239 T 06-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.2E-33 T 06-07-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.5E-59 T 06-07-2017 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-24 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 SUPERFAMILY SSF50447 205 301 1.04E-30 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.7E-18 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM402_RS01025 43561ee1af49ba867c05c77813bd6622 394 Gene3D G3DSA:3.40.50.300 3 208 3.5E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07925 3e368f8e331983bc6370f58a7eff38eb 57 Pfam PF06528 Phage P2 GpE 20 55 6.2E-18 T 06-07-2017 IPR009493 Burkholderia phage phiE202, Gp27 AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 Gene3D G3DSA:3.40.50.1450 1 157 7.1E-50 T 06-07-2017 IPR023430 Peptidase HybD-like domain AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 PRINTS PR00446 Hydrogen uptake protein signature 35 52 5.8E-24 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 PRINTS PR00446 Hydrogen uptake protein signature 15 26 5.8E-24 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 PRINTS PR00446 Hydrogen uptake protein signature 56 66 5.8E-24 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 PRINTS PR00446 Hydrogen uptake protein signature 3 15 5.8E-24 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 PRINTS PR00446 Hydrogen uptake protein signature 67 83 5.8E-24 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 147 5.7E-45 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 Pfam PF01750 Hydrogenase maturation protease 20 146 2.9E-31 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 SUPERFAMILY SSF53163 1 157 5.75E-46 T 06-07-2017 IPR023430 Peptidase HybD-like domain AM402_RS19235 d4012b413b0fdf070e78a4c48b29954c 162 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 4 152 1.1E-48 T 06-07-2017 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 AM402_RS07740 862266a0483027d8ddf7be4a88527ca9 577 Pfam PF01368 DHH family 74 208 2.7E-11 T 06-07-2017 IPR001667 DDH domain AM402_RS07740 862266a0483027d8ddf7be4a88527ca9 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 1.0E-158 T 06-07-2017 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AM402_RS07740 862266a0483027d8ddf7be4a88527ca9 577 SUPERFAMILY SSF64182 48 467 4.97E-115 T 06-07-2017 AM402_RS07740 862266a0483027d8ddf7be4a88527ca9 577 Pfam PF02272 DHHA1 domain 382 446 1.1E-13 T 06-07-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM402_RS15730 4b11e063e76a2bb21c925c7b46985673 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 5.8E-69 T 06-07-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AM402_RS15730 4b11e063e76a2bb21c925c7b46985673 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 34.441 T 06-07-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AM402_RS15730 4b11e063e76a2bb21c925c7b46985673 193 Gene3D G3DSA:2.70.40.10 1 192 2.5E-60 T 06-07-2017 IPR029054 dUTPase-like AM402_RS15730 4b11e063e76a2bb21c925c7b46985673 193 Pfam PF00692 dUTPase 79 184 8.5E-9 T 06-07-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AM402_RS15730 4b11e063e76a2bb21c925c7b46985673 193 SUPERFAMILY SSF51283 1 192 1.44E-60 T 06-07-2017 IPR029054 dUTPase-like AM402_RS12315 9706b2e5527fe9ded38b5051649a43d3 233 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 6.8E-6 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS12315 9706b2e5527fe9ded38b5051649a43d3 233 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 6.8E-6 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS12315 9706b2e5527fe9ded38b5051649a43d3 233 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 6.8E-6 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS12315 9706b2e5527fe9ded38b5051649a43d3 233 Pfam PF01022 Bacterial regulatory protein, arsR family 29 73 8.9E-9 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS12315 9706b2e5527fe9ded38b5051649a43d3 233 SUPERFAMILY SSF46785 10 100 1.8E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12315 9706b2e5527fe9ded38b5051649a43d3 233 Gene3D G3DSA:1.10.10.10 8 100 4.9E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12315 9706b2e5527fe9ded38b5051649a43d3 233 SMART SM00418 20 99 1.6E-12 T 06-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM402_RS01000 3a3ff95f046d593d065661a90a2c8bd7 201 Gene3D G3DSA:3.40.1370.10 53 201 1.7E-59 T 06-07-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM402_RS01000 3a3ff95f046d593d065661a90a2c8bd7 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.145 T 06-07-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01000 3a3ff95f046d593d065661a90a2c8bd7 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 3.0E-75 T 06-07-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01000 3a3ff95f046d593d065661a90a2c8bd7 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 1.0E-63 T 06-07-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AM402_RS01000 3a3ff95f046d593d065661a90a2c8bd7 201 SUPERFAMILY SSF52166 9 200 4.32E-73 T 06-07-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM402_RS13255 1730d640292ea958752917cf46f05a59 791 Pfam PF13954 PapC N-terminal domain 25 157 8.3E-22 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS13255 1730d640292ea958752917cf46f05a59 791 Pfam PF00577 Outer membrane usher protein 176 706 5.3E-113 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS13255 1730d640292ea958752917cf46f05a59 791 SUPERFAMILY SSF141729 25 138 6.93E-18 T 06-07-2017 AM402_RS04100 dc6619d9c09c0c4f1ba3f590932ce06f 140 Pfam PF07681 DoxX 15 95 1.9E-11 T 06-07-2017 IPR032808 DoxX family AM402_RS02840 11ffd171a93a62b0edd4a55353be3cd7 251 SMART SM00382 26 213 3.6E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS02840 11ffd171a93a62b0edd4a55353be3cd7 251 SUPERFAMILY SSF52540 1 226 2.15E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02840 11ffd171a93a62b0edd4a55353be3cd7 251 Pfam PF00005 ABC transporter 17 164 5.2E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS02840 11ffd171a93a62b0edd4a55353be3cd7 251 Gene3D G3DSA:3.40.50.300 1 228 3.0E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07855 5f3386b95e67ea1d7d8454c8c00dfb24 104 Pfam PF16083 LydA holin phage, holin superfamily III 18 93 5.6E-19 T 06-07-2017 IPR032126 LydA-like holin AM402_RS20465 55ca9eed1ffed1604f82c5e537e17369 85 SUPERFAMILY SSF47413 1 67 8.85E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS20465 55ca9eed1ffed1604f82c5e537e17369 85 Pfam PF01381 Helix-turn-helix 11 63 8.2E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS20465 55ca9eed1ffed1604f82c5e537e17369 85 Gene3D G3DSA:1.10.260.40 2 67 1.6E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS20465 55ca9eed1ffed1604f82c5e537e17369 85 SMART SM00530 10 65 2.5E-6 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS00495 dd564a9d35ef5c511bab55dd57b900fc 138 Pfam PF01797 Transposase IS200 like 15 134 6.8E-40 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS00495 dd564a9d35ef5c511bab55dd57b900fc 138 SMART SM01321 14 134 1.1E-41 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS00495 dd564a9d35ef5c511bab55dd57b900fc 138 Gene3D G3DSA:3.30.70.1290 2 137 1.4E-48 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS00495 dd564a9d35ef5c511bab55dd57b900fc 138 SUPERFAMILY SSF143422 6 135 7.72E-46 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 625 688 7.8E-6 T 06-07-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 590 2.7E-23 T 06-07-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 SUPERFAMILY SSF52096 2 304 1.46E-68 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 Gene3D G3DSA:3.40.50.720 308 495 4.8E-58 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 314 492 2.9E-60 T 06-07-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 206 2.0E-40 T 06-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 SUPERFAMILY SSF48179 493 599 2.64E-26 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 Gene3D G3DSA:1.10.1040.10 496 590 3.8E-20 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 Gene3D G3DSA:1.10.1040.10 630 709 1.5E-18 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 SUPERFAMILY SSF51735 312 493 9.69E-57 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 515 - T 06-07-2017 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 712 0.0 T 06-07-2017 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 06-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 SUPERFAMILY SSF48179 623 712 2.55E-23 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS20270 5b7c8f019421212aff62b39c0c530e26 726 Gene3D G3DSA:3.90.226.10 4 207 7.0E-59 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS11740 f101240ca48333309b3c4922b75759ff 138 SUPERFAMILY SSF143422 6 135 2.35E-46 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS11740 f101240ca48333309b3c4922b75759ff 138 SMART SM01321 14 134 1.5E-42 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS11740 f101240ca48333309b3c4922b75759ff 138 Gene3D G3DSA:3.30.70.1290 2 136 5.7E-49 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS11740 f101240ca48333309b3c4922b75759ff 138 Pfam PF01797 Transposase IS200 like 15 134 1.9E-40 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS18630 acc06e3f84cf870eda1c06291084c8d6 313 SUPERFAMILY SSF52540 3 232 1.96E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18630 acc06e3f84cf870eda1c06291084c8d6 313 Pfam PF00005 ABC transporter 21 165 9.3E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS18630 acc06e3f84cf870eda1c06291084c8d6 313 SMART SM00382 30 213 4.6E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18630 acc06e3f84cf870eda1c06291084c8d6 313 Gene3D G3DSA:3.40.50.300 3 228 1.3E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18630 acc06e3f84cf870eda1c06291084c8d6 313 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 Pfam PF01568 Molydopterin dinucleotide binding domain 577 683 7.9E-24 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 2 53 7.2E-13 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 Gene3D G3DSA:3.40.50.740 62 143 1.2E-43 T 06-07-2017 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 Gene3D G3DSA:3.40.50.740 386 493 1.2E-43 T 06-07-2017 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 SUPERFAMILY SSF50692 566 696 4.75E-39 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 SUPERFAMILY SSF53706 2 564 1.19E-189 T 06-07-2017 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 Gene3D G3DSA:3.40.228.10 144 372 6.4E-79 T 06-07-2017 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 Gene3D G3DSA:2.20.25.90 1 54 1.5E-18 T 06-07-2017 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 435 452 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 Pfam PF00384 Molybdopterin oxidoreductase 61 489 3.2E-90 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 SMART SM00926 1 54 8.2E-15 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 7 686 2.0E-267 T 06-07-2017 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AM402_RS02745 3b5e2b462162b2f62047bf7889a694ea 722 Gene3D G3DSA:2.40.40.20 528 689 2.8E-49 T 06-07-2017 AM402_RS06675 7ad869802539e3ebd922aceab60c7f2f 414 Pfam PF07690 Major Facilitator Superfamily 24 260 8.1E-36 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS06675 7ad869802539e3ebd922aceab60c7f2f 414 Gene3D G3DSA:1.20.1250.20 18 203 2.5E-37 T 06-07-2017 AM402_RS06675 7ad869802539e3ebd922aceab60c7f2f 414 Gene3D G3DSA:1.20.1250.20 225 409 1.4E-34 T 06-07-2017 AM402_RS06675 7ad869802539e3ebd922aceab60c7f2f 414 PIRSF PIRSF002808 5 412 1.1E-35 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM402_RS06675 7ad869802539e3ebd922aceab60c7f2f 414 SUPERFAMILY SSF103473 8 406 1.14E-81 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 06-07-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 Pfam PF00764 Arginosuccinate synthase 9 396 2.8E-142 T 06-07-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 SUPERFAMILY SSF52402 6 171 3.97E-45 T 06-07-2017 AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 06-07-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 Gene3D G3DSA:3.40.50.620 6 175 1.4E-59 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 402 50.718 T 06-07-2017 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 SUPERFAMILY SSF69864 176 402 1.44E-87 T 06-07-2017 AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 396 6.5E-135 T 06-07-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS01140 f71ebe620fdd116272d402c63db24fb8 403 Gene3D G3DSA:3.90.1260.10 179 402 5.8E-89 T 06-07-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 06-07-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 Pfam PF01202 Shikimate kinase 11 168 1.9E-44 T 06-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 Gene3D G3DSA:3.40.50.300 2 168 5.9E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 SUPERFAMILY SSF52540 4 168 6.97E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.969 T 06-07-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 PRINTS PR01100 Shikimate kinase family signature 5 20 4.7E-26 T 06-07-2017 AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 PRINTS PR01100 Shikimate kinase family signature 29 42 4.7E-26 T 06-07-2017 AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 PRINTS PR01100 Shikimate kinase family signature 74 83 4.7E-26 T 06-07-2017 AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 PRINTS PR01100 Shikimate kinase family signature 95 112 4.7E-26 T 06-07-2017 AM402_RS17165 d86874047df3cceb3a0469d394c21cd3 170 PRINTS PR01100 Shikimate kinase family signature 57 65 4.7E-26 T 06-07-2017 AM402_RS02625 701b590851b7fcdad693401e9de2ad19 831 Pfam PF15976 CS1-pili formation C-terminal 730 823 1.4E-22 T 06-07-2017 IPR031917 Pilus assembly protein, C-terminal domain AM402_RS02625 701b590851b7fcdad693401e9de2ad19 831 Pfam PF16967 Fimbrial, FimD or usher-like 277 343 1.3E-20 T 06-07-2017 IPR032636 Pilus assembly protein domain AM402_RS11915 411bdc3a3cd285e537ff408a8f801c40 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 1.1E-15 T 06-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM402_RS11915 411bdc3a3cd285e537ff408a8f801c40 129 SUPERFAMILY SSF54593 3 128 2.89E-27 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM402_RS11915 411bdc3a3cd285e537ff408a8f801c40 129 Gene3D G3DSA:3.10.180.10 3 128 5.8E-31 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM402_RS01005 afffbdc0a605ad13ae26ff800be2649a 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 06-07-2017 IPR019926 Ribosomal protein L3, conserved site AM402_RS01005 afffbdc0a605ad13ae26ff800be2649a 209 Gene3D G3DSA:4.10.960.10 77 157 1.6E-35 T 06-07-2017 AM402_RS01005 afffbdc0a605ad13ae26ff800be2649a 209 SUPERFAMILY SSF50447 1 208 1.06E-82 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS01005 afffbdc0a605ad13ae26ff800be2649a 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.093 T 06-07-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01005 afffbdc0a605ad13ae26ff800be2649a 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 2.0E-93 T 06-07-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01005 afffbdc0a605ad13ae26ff800be2649a 209 Gene3D G3DSA:2.40.30.10 158 207 9.4E-9 T 06-07-2017 AM402_RS01005 afffbdc0a605ad13ae26ff800be2649a 209 Gene3D G3DSA:2.40.30.10 3 32 9.4E-9 T 06-07-2017 AM402_RS01005 afffbdc0a605ad13ae26ff800be2649a 209 Pfam PF00297 Ribosomal protein L3 46 182 3.2E-16 T 06-07-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS07930 3b008fe9c58f638dde21657276fdac63 944 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 198 546 1.8E-90 T 06-07-2017 IPR010090 Phage tail tape measure protein AM402_RS07930 3b008fe9c58f638dde21657276fdac63 944 Pfam PF10145 Phage-related minor tail protein 240 438 2.0E-49 T 06-07-2017 IPR010090 Phage tail tape measure protein AM402_RS00455 a8764d39f4b0ce19792d0f1d8f9608d6 352 SUPERFAMILY SSF52540 116 343 3.44E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00455 a8764d39f4b0ce19792d0f1d8f9608d6 352 Gene3D G3DSA:3.40.50.300 117 278 1.3E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00455 a8764d39f4b0ce19792d0f1d8f9608d6 352 Gene3D G3DSA:1.10.40.50 279 347 3.5E-24 T 06-07-2017 AM402_RS00455 a8764d39f4b0ce19792d0f1d8f9608d6 352 Pfam PF03193 Protein of unknown function, DUF258 102 279 4.1E-55 T 06-07-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 AM402_RS00455 a8764d39f4b0ce19792d0f1d8f9608d6 352 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 42 343 36.865 T 06-07-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 AM402_RS00455 a8764d39f4b0ce19792d0f1d8f9608d6 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 337 9.7E-91 T 06-07-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 Gene3D G3DSA:3.30.420.40 1 240 3.3E-70 T 06-07-2017 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 PIRSF PIRSF000538 1 483 2.6E-141 T 06-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 476 3.5E-182 T 06-07-2017 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 SUPERFAMILY SSF53067 2 243 1.9E-74 T 06-07-2017 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 2.2E-82 T 06-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 SUPERFAMILY SSF53067 242 479 2.96E-63 T 06-07-2017 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 Gene3D G3DSA:3.30.420.40 243 479 1.4E-56 T 06-07-2017 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 06-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM402_RS12350 8039ecb679fbc9f7924729b5b0ba861b 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 250 435 1.1E-34 T 06-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM402_RS08615 bc72bff7da0d6205693b0cc2e054ab3e 773 Pfam PF00912 Transglycosylase 58 224 5.2E-51 T 06-07-2017 IPR001264 Glycosyl transferase, family 51 AM402_RS08615 bc72bff7da0d6205693b0cc2e054ab3e 773 Pfam PF00905 Penicillin binding protein transpeptidase domain 300 523 3.3E-13 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM402_RS08615 bc72bff7da0d6205693b0cc2e054ab3e 773 SUPERFAMILY SSF56601 206 635 1.08E-89 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS08615 bc72bff7da0d6205693b0cc2e054ab3e 773 SUPERFAMILY SSF53955 36 257 3.66E-64 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS08615 bc72bff7da0d6205693b0cc2e054ab3e 773 Gene3D G3DSA:3.40.710.10 228 619 4.5E-69 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS08615 bc72bff7da0d6205693b0cc2e054ab3e 773 Gene3D G3DSA:1.10.3810.10 57 227 5.5E-53 T 06-07-2017 AM402_RS08615 bc72bff7da0d6205693b0cc2e054ab3e 773 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 692 770 1.1E-12 T 06-07-2017 IPR009647 Penicillin-binding, C-terminal AM402_RS08615 bc72bff7da0d6205693b0cc2e054ab3e 773 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 38 771 2.9E-245 T 06-07-2017 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 Pfam PF00293 NUDIX domain 7 127 1.0E-20 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 Gene3D G3DSA:3.90.79.10 6 131 3.6E-35 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 PRINTS PR00502 NUDIX hydrolase family signature 36 50 2.4E-8 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 PRINTS PR00502 NUDIX hydrolase family signature 50 65 2.4E-8 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 PRINTS PR01401 Mutator MutT protein signature 5 26 8.9E-15 T 06-07-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 PRINTS PR01401 Mutator MutT protein signature 80 93 8.9E-15 T 06-07-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 TIGRFAM TIGR00586 mutt: mutator mutT protein 4 130 3.8E-46 T 06-07-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM402_RS07515 ccab265c5616f3bbbdc676ee5d10441e 131 SUPERFAMILY SSF55811 4 130 1.18E-35 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS03375 704574877fe7861515f14a3a80cd0f72 560 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 173 402 1.0E-4 T 06-07-2017 IPR005565 Haemolysin activator HlyB AM402_RS03375 704574877fe7861515f14a3a80cd0f72 560 Pfam PF08479 POTRA domain, ShlB-type 73 137 8.7E-5 T 06-07-2017 IPR013686 Polypeptide-transport-associated, ShlB-type AM402_RS03375 704574877fe7861515f14a3a80cd0f72 560 Gene3D G3DSA:3.10.20.310 69 152 1.6E-8 T 06-07-2017 AM402_RS03375 704574877fe7861515f14a3a80cd0f72 560 Gene3D G3DSA:2.40.160.50 184 560 4.1E-49 T 06-07-2017 AM402_RS19450 2eff29614c5f75d1bd0f5a439195cc34 138 SUPERFAMILY SSF143422 6 135 2.35E-46 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS19450 2eff29614c5f75d1bd0f5a439195cc34 138 SMART SM01321 14 134 3.1E-42 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS19450 2eff29614c5f75d1bd0f5a439195cc34 138 Gene3D G3DSA:3.30.70.1290 2 137 3.8E-49 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS19450 2eff29614c5f75d1bd0f5a439195cc34 138 Pfam PF01797 Transposase IS200 like 15 134 1.1E-40 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS06590 e592ca90042a0ea4fc89aa0b5768a244 309 Pfam PF04261 Dyp-type peroxidase family 11 302 1.3E-79 T 06-07-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM402_RS06590 e592ca90042a0ea4fc89aa0b5768a244 309 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 7 302 1.7E-74 T 06-07-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM402_RS06590 e592ca90042a0ea4fc89aa0b5768a244 309 SUPERFAMILY SSF54909 4 308 3.93E-97 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 06-07-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 4.0E-36 T 06-07-2017 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 Pfam PF04055 Radical SAM superfamily 18 178 3.3E-30 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 7.2E-9 T 06-07-2017 AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 SUPERFAMILY SSF102114 4 275 3.66E-73 T 06-07-2017 AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 9.3E-106 T 06-07-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 326 37.771 T 06-07-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 SMART SM00729 13 219 9.6E-5 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM402_RS15930 7c3600214ceeb03ec22b307259071035 326 Gene3D G3DSA:3.20.20.70 3 304 3.5E-76 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 Gene3D G3DSA:3.30.70.1430 40 142 8.2E-29 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82693 136 182 7.06E-21 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82693 268 324 7.06E-21 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82866 811 1008 2.22E-42 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82714 703 784 1.7E-16 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82693 788 833 3.45E-5 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82693 666 701 3.45E-5 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 Gene3D G3DSA:1.20.1640.10 285 498 4.3E-59 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 Gene3D G3DSA:1.10.3850.10 794 1009 5.2E-53 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.2E-83 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 25.374 T 06-07-2017 IPR023931 Multidrug resistance protein MdtC AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82693 555 650 2.51E-15 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 Gene3D G3DSA:3.30.70.1430 558 647 1.3E-10 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82693 40 134 1.28E-22 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82714 183 266 9.29E-16 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 SUPERFAMILY SSF82866 290 490 2.62E-49 T 06-07-2017 AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 Gene3D G3DSA:3.30.2090.10 703 783 3.3E-17 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS10055 8ddf458196116f5b14803f6987287dc6 1027 Gene3D G3DSA:3.30.2090.10 183 264 7.0E-15 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS06360 eeebaf03d61499314adfd83b45d89d99 136 Pfam PF16358 RcsF lipoprotein 27 135 6.3E-47 T 06-07-2017 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AM402_RS06360 eeebaf03d61499314adfd83b45d89d99 136 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 3 136 33.581 T 06-07-2017 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 AM402_RS00355 e98ceb14c23002ebf4ebed7c9e84eaea 131 Gene3D G3DSA:3.30.70.60 1 103 7.4E-43 T 06-07-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AM402_RS00355 e98ceb14c23002ebf4ebed7c9e84eaea 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 2.2E-39 T 06-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00355 e98ceb14c23002ebf4ebed7c9e84eaea 131 SUPERFAMILY SSF54995 1 103 1.44E-38 T 06-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00355 e98ceb14c23002ebf4ebed7c9e84eaea 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.276 T 06-07-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM402_RS00355 e98ceb14c23002ebf4ebed7c9e84eaea 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 06-07-2017 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM402_RS00355 e98ceb14c23002ebf4ebed7c9e84eaea 131 Pfam PF01250 Ribosomal protein S6 3 91 5.2E-29 T 06-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS19095 4dc9020db6e79395a85c3e483984bacb 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 125 136 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS19095 4dc9020db6e79395a85c3e483984bacb 223 Gene3D G3DSA:3.30.70.20 96 128 1.4E-12 T 06-07-2017 AM402_RS19095 4dc9020db6e79395a85c3e483984bacb 223 SUPERFAMILY SSF54862 34 194 6.49E-53 T 06-07-2017 AM402_RS19095 4dc9020db6e79395a85c3e483984bacb 223 Gene3D G3DSA:3.30.70.20 36 95 1.2E-25 T 06-07-2017 AM402_RS19095 4dc9020db6e79395a85c3e483984bacb 223 Gene3D G3DSA:3.30.70.20 166 188 1.2E-25 T 06-07-2017 AM402_RS19095 4dc9020db6e79395a85c3e483984bacb 223 Pfam PF13247 4Fe-4S dicluster domain 84 181 3.3E-23 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS19095 4dc9020db6e79395a85c3e483984bacb 223 Gene3D G3DSA:3.30.70.20 129 165 8.7E-14 T 06-07-2017 AM402_RS05850 b3831d7224a589b670029bf6a7b15573 132 Gene3D G3DSA:2.60.120.10 18 114 8.7E-22 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS05850 b3831d7224a589b670029bf6a7b15573 132 SUPERFAMILY SSF51182 23 114 3.61E-19 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS05850 b3831d7224a589b670029bf6a7b15573 132 Pfam PF07883 Cupin domain 40 106 4.8E-13 T 06-07-2017 IPR013096 Cupin 2, conserved barrel AM402_RS12815 599358f232d551b72b8c6e2d5d7ef94a 191 SUPERFAMILY SSF49401 42 172 8.95E-11 T 06-07-2017 IPR008966 Adhesion domain AM402_RS12815 599358f232d551b72b8c6e2d5d7ef94a 191 Gene3D G3DSA:2.60.40.1090 31 173 1.3E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS12815 599358f232d551b72b8c6e2d5d7ef94a 191 Pfam PF00419 Fimbrial protein 33 173 9.7E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 Pfam PF07244 Surface antigen variable number repeat 266 344 1.4E-14 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 Pfam PF07244 Surface antigen variable number repeat 92 172 2.3E-11 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 Pfam PF07244 Surface antigen variable number repeat 176 263 6.5E-16 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 Pfam PF07244 Surface antigen variable number repeat 348 421 6.5E-15 T 06-07-2017 IPR010827 Surface antigen variable number GO:0019867 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 PIRSF PIRSF006076 1 801 3.4E-252 T 06-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 Pfam PF01103 Surface antigen 448 801 1.3E-98 T 06-07-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 801 25.926 T 06-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 Gene3D G3DSA:2.40.160.50 403 798 5.7E-21 T 06-07-2017 AM402_RS06285 4c1f3807f2a5a70ab188ea29f0ec3df7 801 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 801 1.0E-284 T 06-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM402_RS16920 6aa75996fa942386f6f1329f36c2496d 331 SUPERFAMILY SSF53850 25 328 7.82E-96 T 06-07-2017 AM402_RS16920 6aa75996fa942386f6f1329f36c2496d 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 32 313 2.1E-58 T 06-07-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM402_RS16920 6aa75996fa942386f6f1329f36c2496d 331 Gene3D G3DSA:3.40.190.100 114 263 9.5E-57 T 06-07-2017 AM402_RS16920 6aa75996fa942386f6f1329f36c2496d 331 Gene3D G3DSA:3.40.190.10 264 330 2.3E-55 T 06-07-2017 AM402_RS16920 6aa75996fa942386f6f1329f36c2496d 331 Gene3D G3DSA:3.40.190.10 24 113 2.3E-55 T 06-07-2017 AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 Gene3D G3DSA:2.60.40.1070 154 219 5.8E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 162 219 3.6E-6 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 SUPERFAMILY SSF49354 17 141 1.83E-28 T 06-07-2017 IPR008962 PapD-like AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 141 7.7E-23 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 PRINTS PR00969 Pili chaperone signature 157 172 2.8E-17 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 PRINTS PR00969 Pili chaperone signature 69 90 2.8E-17 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 PRINTS PR00969 Pili chaperone signature 97 114 2.8E-17 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 PRINTS PR00969 Pili chaperone signature 22 31 2.8E-17 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 PRINTS PR00969 Pili chaperone signature 123 138 2.8E-17 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 Gene3D G3DSA:2.60.40.360 21 141 3.0E-26 T 06-07-2017 IPR008962 PapD-like AM402_RS12845 180d04c762447ef27e464f853f2af50d 233 SUPERFAMILY SSF49584 148 219 3.66E-11 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 SUPERFAMILY SSF48019 243 367 1.48E-34 T 06-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 Gene3D G3DSA:1.20.272.10 243 362 5.6E-47 T 06-07-2017 AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 SUPERFAMILY SSF52540 34 221 7.02E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 434 512 2.9E-14 T 06-07-2017 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 5.0E-134 T 06-07-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 Gene3D G3DSA:3.40.50.300 15 166 2.5E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 365 2.7E-32 T 06-07-2017 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 SMART SM00382 37 178 1.9E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 515 655 4.8E-56 T 06-07-2017 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 Gene3D G3DSA:1.10.8.60 167 242 3.6E-29 T 06-07-2017 AM402_RS18745 2104d490ecd4a08bd56e0fd5c691d2eb 658 Pfam PF13177 DNA polymerase III, delta subunit 20 178 9.5E-43 T 06-07-2017 AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.729 T 06-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 Gene3D G3DSA:3.40.50.2020 273 445 6.1E-46 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 SUPERFAMILY SSF53271 252 485 1.8E-71 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 4.0E-16 T 06-07-2017 AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 Pfam PF00156 Phosphoribosyl transferase domain 285 395 2.8E-8 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 4.1E-158 T 06-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 Gene3D G3DSA:3.60.20.10 2 260 2.1E-63 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 PIRSF PIRSF000485 1 483 1.9E-166 T 06-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM402_RS09000 9820b0b824aded277a993680b9f8a81b 505 SUPERFAMILY SSF56235 2 259 3.52E-76 T 06-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AM402_RS10190 5e1c2f105f31ff696dff098aebe49347 348 PIRSF PIRSF026343 9 346 1.5E-96 T 06-07-2017 IPR014524 Outer membrane protein assembly factor BamC AM402_RS10190 5e1c2f105f31ff696dff098aebe49347 348 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 37.907 T 06-07-2017 IPR014524 Outer membrane protein assembly factor BamC AM402_RS10190 5e1c2f105f31ff696dff098aebe49347 348 Pfam PF06804 NlpB/DapX lipoprotein 40 343 1.3E-100 T 06-07-2017 IPR010653 NlpB/DapX lipoprotein AM402_RS12065 0528d9c9124b82b88de24cb6c174d019 261 Gene3D G3DSA:3.20.20.80 173 252 4.9E-4 T 06-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AM402_RS12065 0528d9c9124b82b88de24cb6c174d019 261 Pfam PF13503 Domain of unknown function (DUF4123) 17 138 1.2E-25 T 06-07-2017 IPR025391 Domain of unknown function DUF4123 AM402_RS12160 655a5d88f9225d8d290b004e0ce0e1fd 234 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.481 T 06-07-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AM402_RS12160 655a5d88f9225d8d290b004e0ce0e1fd 234 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 4.5E-86 T 06-07-2017 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AM402_RS12160 655a5d88f9225d8d290b004e0ce0e1fd 234 PIRSF PIRSF006102 1 219 3.6E-80 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM402_RS12160 655a5d88f9225d8d290b004e0ce0e1fd 234 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 199 3.1E-65 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM402_RS02040 b435b6e6e0da4429c58649138e0b935a 320 SUPERFAMILY SSF53448 2 290 2.48E-60 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS02040 b435b6e6e0da4429c58649138e0b935a 320 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 270 4.2E-108 T 06-07-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AM402_RS02040 b435b6e6e0da4429c58649138e0b935a 320 Gene3D G3DSA:3.90.550.10 1 277 2.0E-68 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS02040 b435b6e6e0da4429c58649138e0b935a 320 Pfam PF00483 Nucleotidyl transferase 3 270 2.2E-23 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM402_RS13210 f494d79a163c0bf4baaa2e48ce3ddef0 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 191 2.3E-69 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM402_RS13210 f494d79a163c0bf4baaa2e48ce3ddef0 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 06-07-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM402_RS13210 f494d79a163c0bf4baaa2e48ce3ddef0 194 SUPERFAMILY SSF53178 4 193 3.53E-70 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM402_RS13210 f494d79a163c0bf4baaa2e48ce3ddef0 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.586 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM402_RS13210 f494d79a163c0bf4baaa2e48ce3ddef0 194 Gene3D G3DSA:3.40.50.1470 4 193 1.1E-70 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM402_RS13210 f494d79a163c0bf4baaa2e48ce3ddef0 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 8.3E-53 T 06-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM402_RS13210 f494d79a163c0bf4baaa2e48ce3ddef0 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 06-07-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM402_RS17050 11b1f10d5fe634b2d37f39ecea2438ef 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 9.5E-148 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM402_RS17050 11b1f10d5fe634b2d37f39ecea2438ef 446 PIRSF PIRSF004539 1 444 2.7E-193 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM402_RS17050 11b1f10d5fe634b2d37f39ecea2438ef 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 1.4E-191 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM402_RS08080 f6b56f772e6efe5c71cc9150fd765cfd 163 SUPERFAMILY SSF49772 29 162 2.09E-52 T 06-07-2017 IPR023189 Proteinase inhibitor I11, ecotin domain AM402_RS08080 f6b56f772e6efe5c71cc9150fd765cfd 163 Pfam PF03974 Ecotin 31 152 1.6E-51 T 06-07-2017 IPR023189 Proteinase inhibitor I11, ecotin domain AM402_RS08080 f6b56f772e6efe5c71cc9150fd765cfd 163 Gene3D G3DSA:4.10.1230.10 106 162 2.3E-26 T 06-07-2017 IPR027438 Ecotin, C-terminal AM402_RS08080 f6b56f772e6efe5c71cc9150fd765cfd 163 PIRSF PIRSF006865 1 163 8.2E-55 T 06-07-2017 IPR005658 Proteinase inhibitor I11, ecotin AM402_RS08080 f6b56f772e6efe5c71cc9150fd765cfd 163 Gene3D G3DSA:2.60.40.550 26 105 6.5E-34 T 06-07-2017 IPR023189 Proteinase inhibitor I11, ecotin domain AM402_RS18885 55971cd2a3a7e6d354f9bcf382cdaa76 192 Pfam PF03923 Uncharacterized lipoprotein 34 188 7.9E-48 T 06-07-2017 IPR005619 Uncharacterised protein family, YajG AM402_RS15070 1198dbef61a6afd03b217fd4e56bcb78 429 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 412 8.1E-145 T 06-07-2017 IPR005219 Conserved hypothetical protein CHP00155 AM402_RS15070 1198dbef61a6afd03b217fd4e56bcb78 429 Pfam PF04403 Paraquat-inducible protein A 55 205 9.3E-39 T 06-07-2017 IPR007498 Paraquat-inducible protein A AM402_RS15070 1198dbef61a6afd03b217fd4e56bcb78 429 Pfam PF04403 Paraquat-inducible protein A 257 413 1.4E-53 T 06-07-2017 IPR007498 Paraquat-inducible protein A AM402_RS20800 7daba6c0f783e70be8e756c2b31d4f10 598 SMART SM00327 420 594 2.9E-13 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS20800 7daba6c0f783e70be8e756c2b31d4f10 598 SUPERFAMILY SSF53300 419 588 4.75E-19 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS20800 7daba6c0f783e70be8e756c2b31d4f10 598 Pfam PF00092 von Willebrand factor type A domain 423 562 1.9E-9 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS20800 7daba6c0f783e70be8e756c2b31d4f10 598 Pfam PF06213 Cobalamin biosynthesis protein CobT 10 269 3.3E-9 T 06-07-2017 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AM402_RS20800 7daba6c0f783e70be8e756c2b31d4f10 598 Gene3D G3DSA:3.40.50.410 412 562 4.7E-8 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 SUPERFAMILY SSF53187 2 212 1.1E-65 T 06-07-2017 AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 SUPERFAMILY SSF53187 325 407 1.1E-65 T 06-07-2017 AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 Gene3D G3DSA:3.30.70.360 212 321 5.8E-34 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 SUPERFAMILY SSF55031 211 321 7.43E-29 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 Gene3D G3DSA:3.40.630.10 325 409 1.3E-97 T 06-07-2017 AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 Gene3D G3DSA:3.40.630.10 1 211 1.3E-97 T 06-07-2017 AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 PIRSF PIRSF037215 1 411 1.7E-151 T 06-07-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 410 8.2E-111 T 06-07-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 Pfam PF01546 Peptidase family M20/M25/M40 140 404 2.0E-10 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 139 178 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM402_RS18705 c7232555b92f9ab29a04068cc87c3ea5 417 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM402_RS03815 0f1c380a330b10e4f0f4b30d8a94204b 435 Gene3D G3DSA:3.20.20.60 6 418 4.8E-170 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS03815 0f1c380a330b10e4f0f4b30d8a94204b 435 PIRSF PIRSF001362 1 435 1.3E-226 T 06-07-2017 AM402_RS03815 0f1c380a330b10e4f0f4b30d8a94204b 435 SUPERFAMILY SSF51621 6 418 6.28E-155 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS03815 0f1c380a330b10e4f0f4b30d8a94204b 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 06-07-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AM402_RS03815 0f1c380a330b10e4f0f4b30d8a94204b 435 Pfam PF00463 Isocitrate lyase family 9 256 1.2E-62 T 06-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM402_RS03815 0f1c380a330b10e4f0f4b30d8a94204b 435 Pfam PF00463 Isocitrate lyase family 257 435 1.1E-47 T 06-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM402_RS03815 0f1c380a330b10e4f0f4b30d8a94204b 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 5.5E-88 T 06-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM402_RS03815 0f1c380a330b10e4f0f4b30d8a94204b 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 256 2.1E-117 T 06-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM402_RS17860 4ec6d31ef34498e48632198972fb7edc 246 Pfam PF14348 Domain of unknown function (DUF4400) 54 243 4.2E-53 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type AM402_RS17860 4ec6d31ef34498e48632198972fb7edc 246 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 19 246 4.2E-75 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type AM402_RS20720 17bcf4c93dcc780b18185cbb8ed806d6 541 Gene3D G3DSA:3.90.120.10 321 429 8.4E-5 T 06-07-2017 AM402_RS20720 17bcf4c93dcc780b18185cbb8ed806d6 541 SUPERFAMILY SSF53335 124 443 4.98E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS20720 17bcf4c93dcc780b18185cbb8ed806d6 541 Gene3D G3DSA:3.40.50.150 124 320 8.5E-32 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS20720 17bcf4c93dcc780b18185cbb8ed806d6 541 Pfam PF00145 C-5 cytosine-specific DNA methylase 126 441 5.1E-26 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS08445 ff3be063901b00900a18d3d1e3705a6f 176 Gene3D G3DSA:3.40.140.10 4 150 1.7E-60 T 06-07-2017 AM402_RS08445 ff3be063901b00900a18d3d1e3705a6f 176 SUPERFAMILY SSF53927 5 156 2.56E-58 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AM402_RS08445 ff3be063901b00900a18d3d1e3705a6f 176 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 47.494 T 06-07-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM402_RS08445 ff3be063901b00900a18d3d1e3705a6f 176 Pfam PF14437 MafB19-like deaminase 8 152 5.4E-36 T 06-07-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM402_RS08445 ff3be063901b00900a18d3d1e3705a6f 176 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 06-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM402_RS16835 af46bf4107bf7e8ad7511faec67371ff 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 274 608 1.3E-79 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM402_RS16835 af46bf4107bf7e8ad7511faec67371ff 631 Gene3D G3DSA:3.90.1310.10 133 254 3.2E-38 T 06-07-2017 AM402_RS16835 af46bf4107bf7e8ad7511faec67371ff 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 1.3E-46 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM402_RS16835 af46bf4107bf7e8ad7511faec67371ff 631 SUPERFAMILY SSF56601 256 611 2.0E-91 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS16835 af46bf4107bf7e8ad7511faec67371ff 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 611 2.1E-237 T 06-07-2017 IPR017790 Penicillin-binding protein 2 GO:0016020 AM402_RS16835 af46bf4107bf7e8ad7511faec67371ff 631 SUPERFAMILY SSF56519 58 255 2.35E-52 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM402_RS16835 af46bf4107bf7e8ad7511faec67371ff 631 Gene3D G3DSA:3.40.710.10 255 611 1.4E-99 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS02145 e049dc20c03c0b5c8a17fdd729c75bf9 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 11 461 2.9E-79 T 06-07-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM402_RS11160 896179ecbaba908f251b0287cb7402bb 203 Pfam PF01810 LysE type translocator 16 202 2.1E-29 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS11160 896179ecbaba908f251b0287cb7402bb 203 PIRSF PIRSF006324 1 203 2.3E-41 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS17465 6c5fabbc14accf6994a0cfae0321a7dc 302 SUPERFAMILY SSF56349 19 256 8.83E-12 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS17465 6c5fabbc14accf6994a0cfae0321a7dc 302 Pfam PF12835 Integrase 108 257 1.1E-56 T 06-07-2017 IPR024456 Integrase catalytic domain, putative AM402_RS17465 6c5fabbc14accf6994a0cfae0321a7dc 302 Pfam PF12834 Phage integrase, N-terminal 7 95 2.3E-33 T 06-07-2017 IPR024457 Putative integrase, N-terminal AM402_RS17465 6c5fabbc14accf6994a0cfae0321a7dc 302 Gene3D G3DSA:1.10.150.130 18 95 3.8E-5 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 42.252 T 06-07-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 25.36 T 06-07-2017 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 9.1E-177 T 06-07-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 06-07-2017 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 177 2.7E-40 T 06-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 2.2E-105 T 06-07-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 3.8E-44 T 06-07-2017 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 SUPERFAMILY SSF143243 24 228 4.58E-60 T 06-07-2017 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 158 4.0E-21 T 06-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 137 158 - T 06-07-2017 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 Gene3D G3DSA:1.10.645.10 441 581 5.8E-13 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 Gene3D G3DSA:1.10.645.10 215 440 7.1E-36 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 SUPERFAMILY SSF56762 224 598 5.23E-123 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09125 263e6cfc3af950ca9fec3724b2833063 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.183 T 06-07-2017 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 AM402_RS15285 87f904d63df5b7cb330195ceb09b3cad 455 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 8 449 2.0E-153 T 06-07-2017 IPR010263 Type VI secretion protein, VC_A0114 AM402_RS15285 87f904d63df5b7cb330195ceb09b3cad 455 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 22 448 2.7E-149 T 06-07-2017 IPR010263 Type VI secretion protein, VC_A0114 AM402_RS02980 4a428d4eec18b42005bdab80041abd6a 299 Pfam PF02219 Methylenetetrahydrofolate reductase 18 291 4.4E-109 T 06-07-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AM402_RS02980 4a428d4eec18b42005bdab80041abd6a 299 Gene3D G3DSA:3.20.20.220 13 295 2.1E-109 T 06-07-2017 IPR029041 FAD-linked oxidoreductase-like AM402_RS02980 4a428d4eec18b42005bdab80041abd6a 299 SUPERFAMILY SSF51730 22 294 1.86E-97 T 06-07-2017 IPR029041 FAD-linked oxidoreductase-like AM402_RS02980 4a428d4eec18b42005bdab80041abd6a 299 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.2E-105 T 06-07-2017 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.2E-39 T 06-07-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 Gene3D G3DSA:3.10.150.10 122 249 4.0E-38 T 06-07-2017 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 SMART SM00480 17 363 1.7E-163 T 06-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 Gene3D G3DSA:3.10.150.10 250 367 1.4E-38 T 06-07-2017 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 PIRSF PIRSF000804 1 367 4.0E-118 T 06-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 SUPERFAMILY SSF55979 246 367 5.07E-38 T 06-07-2017 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 SUPERFAMILY SSF55979 1 118 7.18E-27 T 06-07-2017 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 Gene3D G3DSA:3.10.150.10 1 121 5.7E-32 T 06-07-2017 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 2.8E-115 T 06-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 SUPERFAMILY SSF55979 125 245 2.57E-29 T 06-07-2017 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 244 2.5E-38 T 06-07-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS01890 00abd0e1272957074fc571b370d71688 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 366 3.0E-46 T 06-07-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 SUPERFAMILY SSF52922 703 886 1.15E-62 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 887 0.0 T 06-07-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 SUPERFAMILY SSF52518 475 702 2.24E-99 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 PIRSF PIRSF000156 1 888 0.0 T 06-07-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 298 1.5E-8 T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 362 428 8.4E-6 T 06-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 Gene3D G3DSA:3.40.50.920 708 886 9.6E-76 T 06-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 SUPERFAMILY SSF52518 59 468 2.42E-147 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 Gene3D G3DSA:3.40.50.970 59 469 1.6E-159 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS07560 5c0edbc00320b7a5ecd2d2eb7fca784e 888 Gene3D G3DSA:3.40.50.970 474 706 1.5E-120 T 06-07-2017 IPR029061 Thiamin diphosphate-binding fold AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 Pfam PF01612 3'-5' exonuclease 3 167 5.5E-38 T 06-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 TIGRFAM TIGR01388 rnd: ribonuclease D 6 367 1.1E-135 T 06-07-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 Gene3D G3DSA:3.30.420.10 2 185 5.3E-13 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 Hamap MF_01899 Ribonuclease D [rnd]. 3 369 44.011 T 06-07-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 SUPERFAMILY SSF53098 2 210 1.84E-65 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 SMART SM00341 210 289 3.0E-15 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 SUPERFAMILY SSF47819 297 370 1.26E-15 T 06-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 SMART SM00474 3 171 2.2E-38 T 06-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 SUPERFAMILY SSF47819 194 299 2.43E-28 T 06-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM402_RS12945 b06aeeebe4d1654b6a01f10111c70fe5 372 Pfam PF00570 HRDC domain 213 277 8.7E-15 T 06-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 11 605 3.0E-290 T 06-07-2017 IPR006298 GTP-binding protein TypA GO:0005525 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 50 65 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 Gene3D G3DSA:2.40.30.10 212 309 4.9E-24 T 06-07-2017 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 PRINTS PR00315 GTP-binding elongation factor signature 57 65 3.3E-13 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 PRINTS PR00315 GTP-binding elongation factor signature 77 87 3.3E-13 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 PRINTS PR00315 GTP-binding elongation factor signature 13 26 3.3E-13 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 PRINTS PR00315 GTP-binding elongation factor signature 129 138 3.3E-13 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 Gene3D G3DSA:3.40.50.300 9 211 4.9E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 Pfam PF03144 Elongation factor Tu domain 2 225 295 3.0E-10 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 SUPERFAMILY SSF50447 157 305 5.41E-32 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.1E-56 T 06-07-2017 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 SUPERFAMILY SSF54980 308 393 2.59E-15 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 Gene3D G3DSA:3.30.70.240 406 484 3.0E-32 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 140 3.5E-24 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 SUPERFAMILY SSF54980 404 518 5.76E-28 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 SUPERFAMILY SSF52540 7 213 8.2E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 Gene3D G3DSA:3.30.70.870 310 405 4.5E-38 T 06-07-2017 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 Gene3D G3DSA:2.40.50.250 489 583 8.6E-40 T 06-07-2017 AM402_RS03235 42810353410150ca5e2e24cc0fc9a740 616 Pfam PF00679 Elongation factor G C-terminus 403 482 5.5E-23 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 3.2E-73 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 PRINTS PR00174 LacY proton/sugar symporter family signature 256 277 3.2E-73 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 3.2E-73 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 PRINTS PR00174 LacY proton/sugar symporter family signature 211 239 3.2E-73 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 3.2E-73 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 PRINTS PR00174 LacY proton/sugar symporter family signature 311 330 3.2E-73 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 PRINTS PR00174 LacY proton/sugar symporter family signature 342 362 3.2E-73 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 PRINTS PR00174 LacY proton/sugar symporter family signature 280 306 3.2E-73 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 SUPERFAMILY SSF103473 1 398 1.06E-42 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 Gene3D G3DSA:1.20.1250.20 208 403 2.5E-39 T 06-07-2017 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 Gene3D G3DSA:1.20.1250.20 8 190 1.6E-31 T 06-07-2017 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 Pfam PF01306 LacY proton/sugar symporter 7 400 2.9E-130 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS14450 b46e7d65f57b1c196ed1dbca5e5c75df 420 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 7 396 4.5E-131 T 06-07-2017 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-22 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 Pfam PF03466 LysR substrate binding domain 88 293 4.3E-35 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 Gene3D G3DSA:3.40.190.10 81 199 2.5E-22 T 06-07-2017 AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 Gene3D G3DSA:1.10.10.10 1 80 2.8E-27 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 SUPERFAMILY SSF46785 1 111 1.12E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 Gene3D G3DSA:3.40.190.10 200 251 3.3E-9 T 06-07-2017 AM402_RS00725 a1b531858828702142ecb86b54ac1274 295 SUPERFAMILY SSF53850 89 294 1.52E-31 T 06-07-2017 AM402_RS12070 4383369ee5809d19cd17ce2704cc28ba 629 SUPERFAMILY SSF53474 227 415 6.27E-26 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12070 4383369ee5809d19cd17ce2704cc28ba 629 Gene3D G3DSA:3.40.50.1820 467 476 8.7E-38 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12070 4383369ee5809d19cd17ce2704cc28ba 629 Gene3D G3DSA:3.40.50.1820 167 193 8.7E-38 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12070 4383369ee5809d19cd17ce2704cc28ba 629 Gene3D G3DSA:3.40.50.1820 226 419 8.7E-38 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12070 4383369ee5809d19cd17ce2704cc28ba 629 Pfam PF01764 Lipase (class 3) 272 415 1.3E-19 T 06-07-2017 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AM402_RS17060 a28ecd2b201dbf4a9820fb64ca509d7d 364 PIRSF PIRSF001361 1 356 5.9E-162 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM402_RS17060 a28ecd2b201dbf4a9820fb64ca509d7d 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 350 2.4E-163 T 06-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM402_RS17060 a28ecd2b201dbf4a9820fb64ca509d7d 364 Gene3D G3DSA:3.20.20.70 13 351 1.9E-151 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS17060 a28ecd2b201dbf4a9820fb64ca509d7d 364 SUPERFAMILY SSF51569 11 348 2.2E-135 T 06-07-2017 AM402_RS17060 a28ecd2b201dbf4a9820fb64ca509d7d 364 Pfam PF00793 DAHP synthetase I family 47 342 7.1E-101 T 06-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM402_RS00260 6b055f4c4898299e8210e6a14175f630 430 SUPERFAMILY SSF51182 33 162 9.79E-12 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS00260 6b055f4c4898299e8210e6a14175f630 430 Gene3D G3DSA:2.60.120.10 278 341 8.8E-8 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS00260 6b055f4c4898299e8210e6a14175f630 430 Gene3D G3DSA:2.60.120.10 77 157 6.4E-11 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS00260 6b055f4c4898299e8210e6a14175f630 430 SUPERFAMILY SSF51182 290 373 1.48E-7 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS00260 6b055f4c4898299e8210e6a14175f630 430 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 43 123 7.0E-5 T 06-07-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM402_RS00260 6b055f4c4898299e8210e6a14175f630 430 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 277 342 1.2E-4 T 06-07-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM402_RS00260 6b055f4c4898299e8210e6a14175f630 430 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 77 124 2.7E-7 T 06-07-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 SUPERFAMILY SSF51735 3 231 8.34E-62 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.3E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.3E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.3E-9 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 Pfam PF00106 short chain dehydrogenase 2 184 3.9E-52 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 Gene3D G3DSA:3.40.50.720 2 232 2.1E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.5E-21 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.5E-21 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.5E-21 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.5E-21 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.5E-21 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS12260 89e13614a37b4af11699e4a88bdb4451 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.5E-21 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS15360 fb3d7d4489e0c7d1a4c3c7ca0156a6b1 1485 Pfam PF04310 MukB N-terminal 2 227 5.3E-119 T 06-07-2017 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM402_RS15360 fb3d7d4489e0c7d1a4c3c7ca0156a6b1 1485 SUPERFAMILY SSF52540 1283 1434 2.6E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15360 fb3d7d4489e0c7d1a4c3c7ca0156a6b1 1485 SUPERFAMILY SSF52540 21 55 2.6E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15360 fb3d7d4489e0c7d1a4c3c7ca0156a6b1 1485 Gene3D G3DSA:3.40.1140.10 1 226 2.1E-46 T 06-07-2017 AM402_RS15360 fb3d7d4489e0c7d1a4c3c7ca0156a6b1 1485 Pfam PF16330 MukB hinge domain 646 810 5.0E-76 T 06-07-2017 IPR032520 MukB, hinge domain AM402_RS15360 fb3d7d4489e0c7d1a4c3c7ca0156a6b1 1485 PIRSF PIRSF005246 1 1485 0.0 T 06-07-2017 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AM402_RS15360 fb3d7d4489e0c7d1a4c3c7ca0156a6b1 1485 SUPERFAMILY SSF52540 22 224 5.21E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15360 fb3d7d4489e0c7d1a4c3c7ca0156a6b1 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 6.3E-15 T 06-07-2017 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 Gene3D G3DSA:4.10.80.40 556 588 4.9E-22 T 06-07-2017 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 06-07-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.6E-277 T 06-07-2017 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.1E-242 T 06-07-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 Gene3D G3DSA:1.20.58.100 446 555 8.2E-38 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 Pfam PF00890 FAD binding domain 9 405 7.2E-119 T 06-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 PIRSF PIRSF000171 1 580 2.1E-48 T 06-07-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 Gene3D G3DSA:3.50.50.60 6 242 1.4E-119 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 Gene3D G3DSA:3.50.50.60 351 425 1.4E-119 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 SUPERFAMILY SSF46977 452 588 2.35E-46 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 3.1E-36 T 06-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 SUPERFAMILY SSF56425 236 356 3.29E-42 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 SUPERFAMILY SSF51905 5 259 7.87E-75 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 SUPERFAMILY SSF51905 359 439 7.87E-75 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS16185 b76d35b50ecbbdf76c915de0bad84403 588 Gene3D G3DSA:3.90.700.10 243 349 1.9E-40 T 06-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16205 317ca62391b8c61b10f58eb7b1dd9a22 253 SUPERFAMILY SSF51182 30 159 2.67E-10 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS16205 317ca62391b8c61b10f58eb7b1dd9a22 253 Pfam PF02311 AraC-like ligand binding domain 19 112 1.7E-4 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM402_RS16205 317ca62391b8c61b10f58eb7b1dd9a22 253 Gene3D G3DSA:2.60.120.10 29 84 2.5E-6 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS16205 317ca62391b8c61b10f58eb7b1dd9a22 253 SMART SM00342 169 251 1.3E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS16205 317ca62391b8c61b10f58eb7b1dd9a22 253 Gene3D G3DSA:1.10.10.60 169 205 9.7E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS16205 317ca62391b8c61b10f58eb7b1dd9a22 253 SUPERFAMILY SSF46689 205 252 3.4E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS16205 317ca62391b8c61b10f58eb7b1dd9a22 253 Gene3D G3DSA:1.10.10.60 206 251 7.2E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS16205 317ca62391b8c61b10f58eb7b1dd9a22 253 Pfam PF12833 Helix-turn-helix domain 175 252 8.8E-19 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS09420 3d27c07ef59ecb7af7ceabd8c12a3ab0 205 Pfam PF13247 4Fe-4S dicluster domain 59 154 3.2E-29 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS09420 3d27c07ef59ecb7af7ceabd8c12a3ab0 205 Gene3D G3DSA:3.30.70.20 72 103 2.9E-11 T 06-07-2017 AM402_RS09420 3d27c07ef59ecb7af7ceabd8c12a3ab0 205 SUPERFAMILY SSF54862 1 188 1.36E-61 T 06-07-2017 AM402_RS09420 3d27c07ef59ecb7af7ceabd8c12a3ab0 205 Gene3D G3DSA:3.30.70.20 104 139 6.0E-14 T 06-07-2017 AM402_RS09420 3d27c07ef59ecb7af7ceabd8c12a3ab0 205 Gene3D G3DSA:3.30.70.20 3 71 9.9E-30 T 06-07-2017 AM402_RS09420 3d27c07ef59ecb7af7ceabd8c12a3ab0 205 Gene3D G3DSA:3.30.70.20 140 186 9.9E-30 T 06-07-2017 AM402_RS09420 3d27c07ef59ecb7af7ceabd8c12a3ab0 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 6.2E-78 T 06-07-2017 IPR014297 Dimethylsulphoxide reductase, chain B AM402_RS09420 3d27c07ef59ecb7af7ceabd8c12a3ab0 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 Gene3D G3DSA:1.10.10.10 126 206 1.5E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 SMART SM00448 4 120 2.2E-15 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 SUPERFAMILY SSF52172 3 136 8.54E-22 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 2.5E-18 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.941 T 06-07-2017 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 Gene3D G3DSA:3.40.50.2300 2 125 8.0E-22 T 06-07-2017 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 SUPERFAMILY SSF46894 145 206 2.18E-16 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 Pfam PF00072 Response regulator receiver domain 6 120 7.6E-25 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09275 f7c5fb8bc172ca162a3b84a33677aba2 218 SMART SM00421 148 205 2.0E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS14775 459aea9684d26d814d0b655b803e7190 367 Pfam PF06114 Domain of unknown function (DUF955) 163 279 5.0E-13 T 06-07-2017 IPR010359 HTH domain, IrrE-type AM402_RS14775 459aea9684d26d814d0b655b803e7190 367 SUPERFAMILY SSF47413 12 72 8.73E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14775 459aea9684d26d814d0b655b803e7190 367 SMART SM00530 14 68 1.5E-9 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS14775 459aea9684d26d814d0b655b803e7190 367 Pfam PF01381 Helix-turn-helix 15 63 8.0E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS14775 459aea9684d26d814d0b655b803e7190 367 Gene3D G3DSA:1.10.260.40 12 80 2.5E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS19885 885f4dd59f5c9a3a3f6769f9d9dcb763 323 PIRSF PIRSF006621 1 322 3.8E-102 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS19885 885f4dd59f5c9a3a3f6769f9d9dcb763 323 SUPERFAMILY SSF51395 11 319 3.11E-88 T 06-07-2017 AM402_RS19885 885f4dd59f5c9a3a3f6769f9d9dcb763 323 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 06-07-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS19885 885f4dd59f5c9a3a3f6769f9d9dcb763 323 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 8.5E-115 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS19885 885f4dd59f5c9a3a3f6769f9d9dcb763 323 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.182 T 06-07-2017 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AM402_RS19885 885f4dd59f5c9a3a3f6769f9d9dcb763 323 Gene3D G3DSA:3.20.20.70 7 244 6.8E-82 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS19885 885f4dd59f5c9a3a3f6769f9d9dcb763 323 Gene3D G3DSA:1.10.1200.80 253 320 5.6E-18 T 06-07-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AM402_RS19885 885f4dd59f5c9a3a3f6769f9d9dcb763 323 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 7.7E-137 T 06-07-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AM402_RS03005 2d3ee9bf238ffd3859e93c1ea015e1cb 108 Pfam PF00581 Rhodanese-like domain 18 98 2.1E-13 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS03005 2d3ee9bf238ffd3859e93c1ea015e1cb 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 32.345 T 06-07-2017 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM402_RS03005 2d3ee9bf238ffd3859e93c1ea015e1cb 108 SMART SM00450 7 102 2.5E-20 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS03005 2d3ee9bf238ffd3859e93c1ea015e1cb 108 SUPERFAMILY SSF52821 1 102 5.37E-27 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS03005 2d3ee9bf238ffd3859e93c1ea015e1cb 108 Gene3D G3DSA:3.40.250.10 2 100 6.4E-27 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS09850 837a30bfa0da66caff76245634af8e79 132 Pfam PF02561 Flagellar protein FliS 10 125 2.9E-37 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AM402_RS09850 837a30bfa0da66caff76245634af8e79 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 1.0E-34 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AM402_RS09850 837a30bfa0da66caff76245634af8e79 132 Gene3D G3DSA:1.20.120.340 10 128 9.3E-42 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AM402_RS09850 837a30bfa0da66caff76245634af8e79 132 SUPERFAMILY SSF101116 10 130 1.96E-38 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AM402_RS09850 837a30bfa0da66caff76245634af8e79 132 PIRSF PIRSF039090 1 131 9.0E-42 T 06-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AM402_RS02215 aea97ddcc2c587f9c60ab8b377acb6ad 262 Pfam PF13427 Domain of unknown function (DUF4111) 152 253 2.0E-33 T 06-07-2017 IPR025184 Domain of unknown function DUF4111 AM402_RS02215 aea97ddcc2c587f9c60ab8b377acb6ad 262 Pfam PF01909 Nucleotidyltransferase domain 28 98 1.8E-5 T 06-07-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM402_RS02215 aea97ddcc2c587f9c60ab8b377acb6ad 262 Gene3D G3DSA:3.30.460.10 4 106 1.5E-18 T 06-07-2017 AM402_RS02215 aea97ddcc2c587f9c60ab8b377acb6ad 262 SUPERFAMILY SSF81301 7 102 9.81E-13 T 06-07-2017 AM402_RS02215 aea97ddcc2c587f9c60ab8b377acb6ad 262 PIRSF PIRSF000819 8 262 1.8E-53 T 06-07-2017 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 AM402_RS16740 a760140aa7c43fad87ba50a2b143195a 155 Pfam PF02130 Uncharacterized protein family UPF0054 22 144 8.1E-41 T 06-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM402_RS16740 a760140aa7c43fad87ba50a2b143195a 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 145 1.2E-38 T 06-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM402_RS16740 a760140aa7c43fad87ba50a2b143195a 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 06-07-2017 IPR020549 Endoribonuclease YbeY, conserved site AM402_RS16740 a760140aa7c43fad87ba50a2b143195a 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 25.28 T 06-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM402_RS16740 a760140aa7c43fad87ba50a2b143195a 155 Gene3D G3DSA:3.40.390.30 11 153 1.8E-52 T 06-07-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AM402_RS16740 a760140aa7c43fad87ba50a2b143195a 155 SUPERFAMILY SSF55486 3 151 3.17E-51 T 06-07-2017 AM402_RS12115 617c580d25370e551c5cfb6746cadabc 271 Pfam PF03180 NLPA lipoprotein 33 271 1.8E-83 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS12115 617c580d25370e551c5cfb6746cadabc 271 PIRSF PIRSF002854 1 271 4.9E-88 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS12115 617c580d25370e551c5cfb6746cadabc 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 3.4E-127 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS12115 617c580d25370e551c5cfb6746cadabc 271 Gene3D G3DSA:3.40.190.10 33 160 2.9E-49 T 06-07-2017 AM402_RS12115 617c580d25370e551c5cfb6746cadabc 271 SUPERFAMILY SSF53850 33 271 1.68E-70 T 06-07-2017 AM402_RS15740 bf62597b721fe9e2f88654989b1dcd63 370 SUPERFAMILY SSF52540 109 355 3.13E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15740 bf62597b721fe9e2f88654989b1dcd63 370 Gene3D G3DSA:3.40.50.300 98 349 1.9E-103 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15740 bf62597b721fe9e2f88654989b1dcd63 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 1.1E-99 T 06-07-2017 IPR019591 Mrp/NBP35 ATP-binding protein AM402_RS15740 bf62597b721fe9e2f88654989b1dcd63 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 06-07-2017 IPR000808 Mrp, conserved site GO:0005524 AM402_RS15740 bf62597b721fe9e2f88654989b1dcd63 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 36.896 T 06-07-2017 IPR019591 Mrp/NBP35 ATP-binding protein AM402_RS06620 e0bd1c80b05d9d13daf8eca531cc24f2 97 SUPERFAMILY SSF47413 5 74 3.49E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06620 e0bd1c80b05d9d13daf8eca531cc24f2 97 Gene3D G3DSA:1.10.260.40 10 85 2.0E-20 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06620 e0bd1c80b05d9d13daf8eca531cc24f2 97 SMART SM00530 14 69 1.3E-11 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS06620 e0bd1c80b05d9d13daf8eca531cc24f2 97 Pfam PF01381 Helix-turn-helix 17 69 3.7E-13 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 155 3.8E-35 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 108 125 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 Gene3D G3DSA:2.60.40.360 31 155 3.6E-33 T 06-07-2017 IPR008962 PapD-like AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 233 1.1E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 Gene3D G3DSA:2.60.40.1070 161 234 6.4E-17 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 SUPERFAMILY SSF49354 26 154 2.2E-32 T 06-07-2017 IPR008962 PapD-like AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 PRINTS PR00969 Pili chaperone signature 31 40 1.7E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 PRINTS PR00969 Pili chaperone signature 171 186 1.7E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 PRINTS PR00969 Pili chaperone signature 136 151 1.7E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 PRINTS PR00969 Pili chaperone signature 80 101 1.7E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 PRINTS PR00969 Pili chaperone signature 109 126 1.7E-26 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS08010 e435be7f3d203fb42864e3e07a5743d4 242 SUPERFAMILY SSF49584 148 237 1.96E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS11655 9785b8ed7c3933e52ce4deba8e459d4c 264 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 15 104 1.7E-12 T 06-07-2017 IPR014054 Bacteriophage regulatory protein, Rha family AM402_RS11655 9785b8ed7c3933e52ce4deba8e459d4c 264 Pfam PF03374 Phage antirepressor protein KilAC domain 154 239 2.5E-6 T 06-07-2017 IPR005039 Antirepressor protein, C-terminal GO:0003677 AM402_RS11680 ce95c0a139bec170642668b332cc7f3a 232 Pfam PF05100 Phage minor tail protein L 30 231 1.2E-75 T 06-07-2017 IPR006487 Bacteriophage lambda, GpL, minor tail AM402_RS11680 ce95c0a139bec170642668b332cc7f3a 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 13 231 5.0E-73 T 06-07-2017 IPR006487 Bacteriophage lambda, GpL, minor tail AM402_RS16375 ce95c0a139bec170642668b332cc7f3a 232 Pfam PF05100 Phage minor tail protein L 30 231 1.2E-75 T 06-07-2017 IPR006487 Bacteriophage lambda, GpL, minor tail AM402_RS16375 ce95c0a139bec170642668b332cc7f3a 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 13 231 5.0E-73 T 06-07-2017 IPR006487 Bacteriophage lambda, GpL, minor tail AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 368 8.2E-23 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 SUPERFAMILY SSF53686 1 427 1.96E-134 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 Pfam PF14821 Threonine synthase N terminus 8 80 9.2E-14 T 06-07-2017 IPR029144 Threonine synthase, N-terminal AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 06-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 TIGRFAM TIGR00260 thrC: threonine synthase 54 397 2.2E-117 T 06-07-2017 IPR004450 Threonine synthase-like AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 Gene3D G3DSA:3.90.1380.10 1 84 8.4E-22 T 06-07-2017 IPR029144 Threonine synthase, N-terminal AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 Gene3D G3DSA:3.40.50.1100 106 194 1.0E-11 T 06-07-2017 AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 Gene3D G3DSA:3.40.50.1100 195 318 6.1E-52 T 06-07-2017 AM402_RS19395 3535df56c7d713556471f73ac2ebb2ac 430 Gene3D G3DSA:3.40.50.1100 325 401 1.7E-16 T 06-07-2017 AM402_RS13815 eb61b729b9778b96009ab2255596c5b8 109 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 7 105 4.0E-15 T 06-07-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor AM402_RS13815 eb61b729b9778b96009ab2255596c5b8 109 Pfam PF05521 Phage head-tail joining protein 7 102 2.0E-25 T 06-07-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor AM402_RS13345 50a04c6a161f8ee1b02414ade97c5580 326 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 62.651 T 06-07-2017 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 AM402_RS13345 50a04c6a161f8ee1b02414ade97c5580 326 Pfam PF00535 Glycosyl transferase family 2 11 170 6.1E-36 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM402_RS13345 50a04c6a161f8ee1b02414ade97c5580 326 Gene3D G3DSA:3.90.550.10 8 147 5.5E-30 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS13345 50a04c6a161f8ee1b02414ade97c5580 326 SUPERFAMILY SSF53448 8 233 1.65E-42 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS08765 50747440d423430c480a8b7379685c9d 146 SUPERFAMILY SSF46785 19 137 1.01E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS08765 50747440d423430c480a8b7379685c9d 146 Pfam PF12802 MarR family 32 86 1.0E-8 T 06-07-2017 AM402_RS08765 50747440d423430c480a8b7379685c9d 146 Gene3D G3DSA:1.10.10.10 21 136 6.0E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS08765 50747440d423430c480a8b7379685c9d 146 SMART SM00347 22 122 8.8E-15 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS08765 50747440d423430c480a8b7379685c9d 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 3.1E-10 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS08765 50747440d423430c480a8b7379685c9d 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 3.1E-10 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS08765 50747440d423430c480a8b7379685c9d 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 3.1E-10 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS08765 50747440d423430c480a8b7379685c9d 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 3.1E-10 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS12995 10daf5eb7343a8642af9782a7954bc7b 280 Gene3D G3DSA:3.40.50.10490 95 270 1.8E-37 T 06-07-2017 AM402_RS12995 10daf5eb7343a8642af9782a7954bc7b 280 SUPERFAMILY SSF53697 93 276 2.7E-40 T 06-07-2017 AM402_RS12995 10daf5eb7343a8642af9782a7954bc7b 280 Pfam PF01380 SIS domain 125 252 3.3E-22 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS12995 10daf5eb7343a8642af9782a7954bc7b 280 SUPERFAMILY SSF46689 1 80 8.24E-19 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12995 10daf5eb7343a8642af9782a7954bc7b 280 Gene3D G3DSA:1.10.10.10 1 80 1.7E-28 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12995 10daf5eb7343a8642af9782a7954bc7b 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 5.8E-26 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM402_RS09260 918d0a3300802243cbd917498e3e8e8c 245 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 5.2E-90 T 06-07-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM402_RS09260 918d0a3300802243cbd917498e3e8e8c 245 Pfam PF13489 Methyltransferase domain 57 206 4.0E-24 T 06-07-2017 AM402_RS09260 918d0a3300802243cbd917498e3e8e8c 245 SUPERFAMILY SSF53335 18 237 1.33E-46 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS09260 918d0a3300802243cbd917498e3e8e8c 245 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.807 T 06-07-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM402_RS09260 918d0a3300802243cbd917498e3e8e8c 245 Gene3D G3DSA:3.40.50.150 28 223 1.0E-44 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.9E-17 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.9E-17 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.9E-17 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 SMART SM00870 5 323 3.1E-133 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 PIRSF PIRSF001220 1 334 5.1E-94 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 PIRSF PIRSF500176 2 332 7.6E-110 T 06-07-2017 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 SUPERFAMILY SSF53774 3 335 6.28E-111 T 06-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 Pfam PF00710 Asparaginase, N-terminal 6 189 5.4E-63 T 06-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 06-07-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 3.7E-118 T 06-07-2017 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 06-07-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 Gene3D G3DSA:3.40.50.1170 5 202 1.4E-75 T 06-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM402_RS10815 f984a1bf815624ab0fcbc0c214a7f2bd 340 Gene3D G3DSA:3.40.50.40 211 336 1.3E-50 T 06-07-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AM402_RS18015 c45820be57b3b366c6e04a355f26bdd5 274 SUPERFAMILY SSF46894 25 99 5.67E-7 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS18015 c45820be57b3b366c6e04a355f26bdd5 274 Gene3D G3DSA:1.10.10.10 42 101 7.0E-4 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02590 eb32d3ff3c78cfe9402112241ae085d3 680 Gene3D G3DSA:3.40.390.10 361 504 4.1E-59 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS02590 eb32d3ff3c78cfe9402112241ae085d3 680 Pfam PF01432 Peptidase family M3 222 677 3.5E-169 T 06-07-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AM402_RS02590 eb32d3ff3c78cfe9402112241ae085d3 680 Gene3D G3DSA:1.20.1050.40 10 138 1.3E-25 T 06-07-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AM402_RS02590 eb32d3ff3c78cfe9402112241ae085d3 680 Gene3D G3DSA:1.10.1370.10 505 678 2.4E-146 T 06-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AM402_RS02590 eb32d3ff3c78cfe9402112241ae085d3 680 Gene3D G3DSA:1.10.1370.10 140 349 2.4E-146 T 06-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AM402_RS02590 eb32d3ff3c78cfe9402112241ae085d3 680 SUPERFAMILY SSF55486 1 677 2.11E-211 T 06-07-2017 AM402_RS04450 32e3934f30d4cff5f9fd932a4e29119c 1644 SUPERFAMILY SSF52540 1275 1437 4.0E-14 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04450 32e3934f30d4cff5f9fd932a4e29119c 1644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 1292 1372 7.7E-5 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS04450 32e3934f30d4cff5f9fd932a4e29119c 1644 Gene3D G3DSA:3.40.50.300 1281 1433 9.9E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04450 32e3934f30d4cff5f9fd932a4e29119c 1644 Pfam PF12458 ATPase involved in DNA repair 38 485 7.1E-200 T 06-07-2017 IPR020958 DUF3686 AM402_RS08205 ed12c990fc9059a798eb3d73fddf51ad 498 SUPERFAMILY SSF51905 5 68 2.16E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS08205 ed12c990fc9059a798eb3d73fddf51ad 498 SUPERFAMILY SSF51905 103 330 2.16E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS08205 ed12c990fc9059a798eb3d73fddf51ad 498 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 9 493 4.7E-207 T 06-07-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM402_RS08205 ed12c990fc9059a798eb3d73fddf51ad 498 Gene3D G3DSA:3.50.50.60 150 332 3.9E-21 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS08205 ed12c990fc9059a798eb3d73fddf51ad 498 Gene3D G3DSA:3.50.50.60 7 75 3.9E-21 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS08205 ed12c990fc9059a798eb3d73fddf51ad 498 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 5 495 48.755 T 06-07-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM402_RS08205 ed12c990fc9059a798eb3d73fddf51ad 498 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 8 495 9.2E-233 T 06-07-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM402_RS05610 77c9b909f9edca681db11d52b17e37b3 238 Gene3D G3DSA:3.40.50.1580 10 233 1.3E-85 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS05610 77c9b909f9edca681db11d52b17e37b3 238 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.946 T 06-07-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM402_RS05610 77c9b909f9edca681db11d52b17e37b3 238 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 3.1E-122 T 06-07-2017 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AM402_RS05610 77c9b909f9edca681db11d52b17e37b3 238 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 06-07-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS05610 77c9b909f9edca681db11d52b17e37b3 238 Pfam PF01048 Phosphorylase superfamily 15 221 1.7E-42 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS05610 77c9b909f9edca681db11d52b17e37b3 238 SUPERFAMILY SSF53167 3 234 4.45E-94 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS00745 899b15e78c5a5c339af2bf2b88b6cb81 92 Gene3D G3DSA:3.30.70.260 1 76 1.9E-11 T 06-07-2017 AM402_RS00745 899b15e78c5a5c339af2bf2b88b6cb81 92 SUPERFAMILY SSF55021 3 74 4.16E-11 T 06-07-2017 AM402_RS00745 899b15e78c5a5c339af2bf2b88b6cb81 92 Pfam PF13710 ACT domain 13 71 1.4E-25 T 06-07-2017 AM402_RS17825 7306f9a48400a8c2787fc488ef456c30 128 Pfam PF11990 Protein of unknown function (DUF3487) 3 113 2.1E-38 T 06-07-2017 IPR021877 Protein of unknown function DUF3487 AM402_RS17825 7306f9a48400a8c2787fc488ef456c30 128 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 113 4.3E-37 T 06-07-2017 IPR021877 Protein of unknown function DUF3487 AM402_RS19490 617e705520111eddc887e3d61cd6c8b7 138 Pfam PF07681 DoxX 17 96 4.7E-19 T 06-07-2017 IPR032808 DoxX family AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 Pfam PF01476 LysM domain 400 439 1.2E-7 T 06-07-2017 IPR018392 LysM domain AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 Pfam PF01476 LysM domain 336 378 9.4E-12 T 06-07-2017 IPR018392 LysM domain AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 112 140 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 SUPERFAMILY SSF54106 397 441 1.19E-9 T 06-07-2017 IPR018392 LysM domain AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 SUPERFAMILY SSF53955 90 233 2.67E-40 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 Pfam PF01464 Transglycosylase SLT domain 94 203 1.5E-26 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 Gene3D G3DSA:1.10.530.10 88 235 2.1E-46 T 06-07-2017 AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 Gene3D G3DSA:3.10.350.10 397 441 1.3E-13 T 06-07-2017 IPR018392 LysM domain AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 Gene3D G3DSA:3.10.350.10 335 378 4.0E-17 T 06-07-2017 IPR018392 LysM domain AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 SUPERFAMILY SSF54106 335 378 6.93E-11 T 06-07-2017 IPR018392 LysM domain AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 SMART SM00257 399 441 5.2E-10 T 06-07-2017 IPR018392 LysM domain AM402_RS18385 b5c7b181305a85493c9b1c2613e1428d 444 SMART SM00257 335 379 4.0E-14 T 06-07-2017 IPR018392 LysM domain AM402_RS12915 efec5c7d96c6582e103be21f809e5451 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 209 6.9E-52 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM402_RS12915 efec5c7d96c6582e103be21f809e5451 218 SUPERFAMILY SSF56529 12 211 2.35E-66 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM402_RS12915 efec5c7d96c6582e103be21f809e5451 218 Gene3D G3DSA:3.90.850.10 14 217 3.1E-74 T 06-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 Pfam PF00037 4Fe-4S binding domain 77 98 5.7E-8 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 Gene3D G3DSA:3.30.70.20 54 87 1.4E-16 T 06-07-2017 AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 Gene3D G3DSA:3.30.70.20 144 159 3.2E-12 T 06-07-2017 AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 Gene3D G3DSA:3.30.70.20 88 111 3.2E-12 T 06-07-2017 AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 SUPERFAMILY SSF54862 140 185 2.65E-41 T 06-07-2017 AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 SUPERFAMILY SSF54862 1 101 2.65E-41 T 06-07-2017 AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 Pfam PF12798 4Fe-4S binding domain 147 167 0.0085 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 Gene3D G3DSA:3.30.70.20 160 184 1.5E-21 T 06-07-2017 AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 Gene3D G3DSA:3.30.70.20 4 53 1.5E-21 T 06-07-2017 AM402_RS05030 bc3c961c719aaa1a9f60b00ab8e05ffa 206 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS11350 e523256ce09924a07a70874a37608e06 111 Gene3D G3DSA:3.20.20.70 24 52 3.6E-4 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS11965 4d5772637f457ba8bdce35a4bb0fb11b 213 SUPERFAMILY SSF56925 23 213 1.18E-30 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS11965 4d5772637f457ba8bdce35a4bb0fb11b 213 Pfam PF03922 OmpW family 23 213 1.8E-63 T 06-07-2017 IPR005618 Outer membrane protein, OmpW GO:0019867 AM402_RS11965 4d5772637f457ba8bdce35a4bb0fb11b 213 Gene3D G3DSA:2.40.160.20 22 213 5.3E-70 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS11965 4d5772637f457ba8bdce35a4bb0fb11b 213 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 205 213 - T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS07185 e15519822c766d3b50eb8e0b89540e82 519 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 0.0013 T 06-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM402_RS07185 e15519822c766d3b50eb8e0b89540e82 519 SUPERFAMILY SSF53649 44 493 7.74E-96 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS07185 e15519822c766d3b50eb8e0b89540e82 519 Gene3D G3DSA:3.30.1120.10 423 503 2.3E-19 T 06-07-2017 AM402_RS07185 e15519822c766d3b50eb8e0b89540e82 519 Gene3D G3DSA:3.40.720.10 44 404 4.9E-84 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS07185 e15519822c766d3b50eb8e0b89540e82 519 Pfam PF00884 Sulfatase 44 389 1.2E-55 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 34 424 8.8E-105 T 06-07-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 Pfam PF08245 Mur ligase middle domain 55 221 2.9E-13 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 PIRSF PIRSF001563 7 430 1.3E-107 T 06-07-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 Gene3D G3DSA:3.40.1190.10 13 295 1.9E-90 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 Gene3D G3DSA:3.90.190.20 296 426 5.9E-45 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 SUPERFAMILY SSF53623 15 292 6.11E-83 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 53 76 - T 06-07-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 SUPERFAMILY SSF53244 294 424 5.23E-33 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS08985 257dfd8ec3e917b655d98e8f6b305349 432 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 145 160 - T 06-07-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM402_RS02535 3d614b49c5ee362d0a37a100d813a908 294 SUPERFAMILY SSF64397 5 237 3.53E-73 T 06-07-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM402_RS02535 3d614b49c5ee362d0a37a100d813a908 294 Gene3D G3DSA:3.90.1280.10 231 285 4.0E-22 T 06-07-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM402_RS02535 3d614b49c5ee362d0a37a100d813a908 294 SUPERFAMILY SSF118352 229 285 1.7E-18 T 06-07-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM402_RS02535 3d614b49c5ee362d0a37a100d813a908 294 Pfam PF01430 Hsp33 protein 5 278 3.0E-86 T 06-07-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM402_RS02535 3d614b49c5ee362d0a37a100d813a908 294 Gene3D G3DSA:1.10.287.480 184 230 6.6E-22 T 06-07-2017 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AM402_RS02535 3d614b49c5ee362d0a37a100d813a908 294 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 289 31.897 T 06-07-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM402_RS02535 3d614b49c5ee362d0a37a100d813a908 294 Gene3D G3DSA:3.55.30.10 2 176 3.2E-65 T 06-07-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM402_RS02535 3d614b49c5ee362d0a37a100d813a908 294 PIRSF PIRSF005261 1 289 5.2E-74 T 06-07-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM402_RS20600 d60ffb1c6f16abfb145ba79e6d41afe2 146 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 95 2.4E-5 T 06-07-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS20600 d60ffb1c6f16abfb145ba79e6d41afe2 146 SUPERFAMILY SSF50475 7 139 1.01E-16 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS20600 d60ffb1c6f16abfb145ba79e6d41afe2 146 PIRSF PIRSF009554 3 146 2.1E-50 T 06-07-2017 IPR011194 Uncharacterised protein family UPF0306 AM402_RS20600 d60ffb1c6f16abfb145ba79e6d41afe2 146 Gene3D G3DSA:2.30.110.10 4 139 4.7E-10 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS14820 9fd7799b673a80bac8024f545bd79c9e 151 Gene3D G3DSA:1.10.3600.10 1 130 3.9E-38 T 06-07-2017 IPR009364 Putative bacterial toxin ydaT AM402_RS14820 9fd7799b673a80bac8024f545bd79c9e 151 Pfam PF06254 Putative bacterial toxin ydaT 58 139 2.8E-22 T 06-07-2017 IPR009364 Putative bacterial toxin ydaT AM402_RS02545 19de4aef15e95bd86c631f3be85f4a64 233 PIRSF PIRSF006232 1 231 5.4E-57 T 06-07-2017 IPR012093 Pirin AM402_RS02545 19de4aef15e95bd86c631f3be85f4a64 233 Pfam PF02678 Pirin 7 119 8.9E-36 T 06-07-2017 IPR003829 Pirin, N-terminal domain AM402_RS02545 19de4aef15e95bd86c631f3be85f4a64 233 Gene3D G3DSA:2.60.120.10 4 231 1.4E-69 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS02545 19de4aef15e95bd86c631f3be85f4a64 233 SUPERFAMILY SSF51182 1 230 2.39E-79 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SMART SM00671 41 76 9.5E-13 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SMART SM00671 77 112 5.9E-8 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SMART SM00671 149 184 1.0E-12 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SMART SM00671 185 220 2.8E-11 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SMART SM00671 221 256 1.5E-11 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SMART SM00671 113 148 2.0E-10 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SMART SM00671 257 292 1.1E-5 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Pfam PF08238 Sel1 repeat 41 76 3.3E-10 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Pfam PF08238 Sel1 repeat 77 111 1.1E-6 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Pfam PF08238 Sel1 repeat 149 184 4.5E-11 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Pfam PF08238 Sel1 repeat 259 291 8.3E-5 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Pfam PF08238 Sel1 repeat 185 220 6.8E-11 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Pfam PF08238 Sel1 repeat 222 256 1.8E-10 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Pfam PF08238 Sel1 repeat 113 148 6.1E-10 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SUPERFAMILY SSF81901 30 159 3.14E-35 T 06-07-2017 AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Gene3D G3DSA:1.25.40.10 180 264 8.2E-35 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Gene3D G3DSA:1.25.40.10 109 179 1.2E-32 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 Gene3D G3DSA:1.25.40.10 28 108 3.2E-28 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS19375 f15237ee3fb03fb919641ccff699810a 327 SUPERFAMILY SSF81901 142 298 6.89E-45 T 06-07-2017 AM402_RS15780 2c09f3922fd2f68c17d278a85ea8fcf2 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 39 219 1.8E-85 T 06-07-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AM402_RS15780 2c09f3922fd2f68c17d278a85ea8fcf2 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 35 218 34.256 T 06-07-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AM402_RS15780 2c09f3922fd2f68c17d278a85ea8fcf2 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 145 155 - T 06-07-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AM402_RS15780 2c09f3922fd2f68c17d278a85ea8fcf2 220 SUPERFAMILY SSF55620 6 218 2.67E-74 T 06-07-2017 AM402_RS15780 2c09f3922fd2f68c17d278a85ea8fcf2 220 Gene3D G3DSA:3.30.1130.10 91 218 1.5E-51 T 06-07-2017 AM402_RS15780 2c09f3922fd2f68c17d278a85ea8fcf2 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 97 113 - T 06-07-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AM402_RS15780 2c09f3922fd2f68c17d278a85ea8fcf2 220 Gene3D G3DSA:1.10.286.10 5 85 9.7E-31 T 06-07-2017 AM402_RS15780 2c09f3922fd2f68c17d278a85ea8fcf2 220 Pfam PF01227 GTP cyclohydrolase I 39 217 3.0E-63 T 06-07-2017 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AM402_RS16780 d15f0c92ed5b56fc367158316e89497c 297 Gene3D G3DSA:3.40.190.10 122 228 4.5E-31 T 06-07-2017 AM402_RS16780 d15f0c92ed5b56fc367158316e89497c 297 Gene3D G3DSA:3.40.190.10 229 270 3.6E-27 T 06-07-2017 AM402_RS16780 d15f0c92ed5b56fc367158316e89497c 297 Gene3D G3DSA:3.40.190.10 34 121 3.6E-27 T 06-07-2017 AM402_RS16780 d15f0c92ed5b56fc367158316e89497c 297 SMART SM00062 36 268 1.3E-62 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM402_RS16780 d15f0c92ed5b56fc367158316e89497c 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 266 1.9E-46 T 06-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM402_RS16780 d15f0c92ed5b56fc367158316e89497c 297 SUPERFAMILY SSF53850 3 268 3.17E-60 T 06-07-2017 AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 Gene3D G3DSA:3.40.50.720 1 139 7.6E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 299 1.4E-53 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 SUPERFAMILY SSF51735 104 300 2.98E-54 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 06-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 SUPERFAMILY SSF52283 2 137 2.27E-42 T 06-07-2017 AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 330 3.5E-33 T 06-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 Gene3D G3DSA:3.40.50.720 140 306 2.2E-42 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS12875 e8e0b7e1ebe11a265ed9d1708fa648d1 332 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM402_RS09710 00c44f9c94a6cff9483b6ca78fd5e882 406 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 328 405 4.5E-22 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM402_RS09710 00c44f9c94a6cff9483b6ca78fd5e882 406 Pfam PF07559 Flagellar basal body protein FlaE 176 287 7.7E-20 T 06-07-2017 IPR011491 Flagellar hook protein FlgE AM402_RS09710 00c44f9c94a6cff9483b6ca78fd5e882 406 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site AM402_RS09710 00c44f9c94a6cff9483b6ca78fd5e882 406 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 388 5.9E-99 T 06-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM402_RS09710 00c44f9c94a6cff9483b6ca78fd5e882 406 Pfam PF00460 Flagella basal body rod protein 4 33 5.0E-10 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM402_RS09710 00c44f9c94a6cff9483b6ca78fd5e882 406 SUPERFAMILY SSF117143 72 367 4.71E-81 T 06-07-2017 AM402_RS09780 24b2081e80dc2687c5a58459e828c88e 160 Pfam PF03748 Flagellar basal body-associated protein FliL 58 158 3.4E-20 T 06-07-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AM402_RS20375 bd6939afbf5462e2a14bcd73ab4711fb 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 2.3E-73 T 06-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM402_RS20375 bd6939afbf5462e2a14bcd73ab4711fb 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 9.5E-192 T 06-07-2017 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 Pfam PF00535 Glycosyl transferase family 2 276 446 6.7E-38 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 Pfam PF07238 PilZ domain 694 791 2.1E-10 T 06-07-2017 IPR009875 PilZ domain GO:0035438 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 SUPERFAMILY SSF141371 693 782 5.49E-13 T 06-07-2017 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 Gene3D G3DSA:3.90.550.10 273 506 9.7E-26 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 Gene3D G3DSA:2.40.10.220 693 781 3.0E-9 T 06-07-2017 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 Pfam PF03552 Cellulose synthase 451 574 1.5E-11 T 06-07-2017 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 150 831 8.6E-269 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 SUPERFAMILY SSF53448 272 555 6.75E-55 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 1.1E-51 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 1.1E-51 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 1.1E-51 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 1.1E-51 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 1.1E-51 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 1.1E-51 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 1.1E-51 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS07300 cda93282eddd3f4a16da4f3795590ae8 865 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 1.1E-51 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS06925 466106a8baf57bb458dcadaf8f1152e2 57 Pfam PF13973 Domain of unknown function (DUF4222) 2 53 2.0E-18 T 06-07-2017 IPR025317 Protein of unknown function DUF4222 AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 Pfam PF00005 ABC transporter 18 184 1.9E-19 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 Pfam PF00005 ABC transporter 337 468 1.4E-23 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 Gene3D G3DSA:3.40.50.300 318 529 4.0E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 SUPERFAMILY SSF52540 295 527 7.48E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 SMART SM00382 26 228 2.3E-10 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 SMART SM00382 345 513 2.9E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 Gene3D G3DSA:3.40.50.300 5 100 1.7E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 Gene3D G3DSA:3.40.50.300 132 280 1.7E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 SUPERFAMILY SSF52540 6 237 4.1E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12435 01d7f1a71440701beb4101a0e29ba66c 532 Pfam PF12848 ABC transporter 224 309 3.8E-19 T 06-07-2017 IPR032781 ABC-transporter extension domain AM402_RS21955 6a20c14beb7e69974ea9b41796786e38 336 Gene3D G3DSA:1.10.443.10 149 328 1.3E-40 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS21955 6a20c14beb7e69974ea9b41796786e38 336 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 54 115 5.7E-6 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS21955 6a20c14beb7e69974ea9b41796786e38 336 Gene3D G3DSA:1.10.150.130 51 116 1.9E-4 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS21955 6a20c14beb7e69974ea9b41796786e38 336 Pfam PF00589 Phage integrase family 151 319 3.9E-29 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS21955 6a20c14beb7e69974ea9b41796786e38 336 SUPERFAMILY SSF56349 149 332 2.56E-45 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS03935 b9042add1309935ae9f3f6d94a52bfd8 344 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 21 343 52.148 T 06-07-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM402_RS03935 b9042add1309935ae9f3f6d94a52bfd8 344 SUPERFAMILY SSF51395 26 323 8.55E-73 T 06-07-2017 AM402_RS03935 b9042add1309935ae9f3f6d94a52bfd8 344 PIRSF PIRSF006621 16 343 9.4E-74 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS03935 b9042add1309935ae9f3f6d94a52bfd8 344 Pfam PF01207 Dihydrouridine synthase (Dus) 30 338 2.1E-96 T 06-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS03935 b9042add1309935ae9f3f6d94a52bfd8 344 Gene3D G3DSA:3.20.20.70 26 268 2.7E-76 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS03935 b9042add1309935ae9f3f6d94a52bfd8 344 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 26 342 5.7E-165 T 06-07-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM402_RS03935 b9042add1309935ae9f3f6d94a52bfd8 344 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 108 126 - T 06-07-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM402_RS10630 78893f2079d1b030349ef907b71bb9ff 161 Pfam PF16103 Domain of unknown function (DUF4822) 45 158 1.2E-22 T 06-07-2017 IPR032247 Domain of unknown function DUF4822 AM402_RS13605 0696e67f469b31e94a319f3293592c3e 93 ProDom PD065628 PM0975 PRECURSOR HI0310 SIGNAL 24 90 0.004 T 06-07-2017 IPR020493 Uncharacterised protein family HI0310 AM402_RS19350 c6628a3d33c289fa5b98542514ef8b7d 305 SUPERFAMILY SSF53850 92 289 3.1E-25 T 06-07-2017 AM402_RS19350 c6628a3d33c289fa5b98542514ef8b7d 305 Gene3D G3DSA:1.10.10.10 6 85 3.5E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19350 c6628a3d33c289fa5b98542514ef8b7d 305 Pfam PF03466 LysR substrate binding domain 98 287 1.3E-11 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS19350 c6628a3d33c289fa5b98542514ef8b7d 305 Gene3D G3DSA:3.40.190.10 99 229 2.0E-9 T 06-07-2017 AM402_RS19350 c6628a3d33c289fa5b98542514ef8b7d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.9E-17 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS19350 c6628a3d33c289fa5b98542514ef8b7d 305 SUPERFAMILY SSF46785 2 87 3.97E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06505 10b1c97e0f5de512605af6b519ffd295 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 205 6.2E-69 T 06-07-2017 AM402_RS06505 10b1c97e0f5de512605af6b519ffd295 208 SUPERFAMILY SSF53335 12 204 9.86E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS06505 10b1c97e0f5de512605af6b519ffd295 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 06-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM402_RS06505 10b1c97e0f5de512605af6b519ffd295 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 4 208 36.901 T 06-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM402_RS06505 10b1c97e0f5de512605af6b519ffd295 208 Gene3D G3DSA:3.40.50.150 12 205 3.3E-61 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS06505 10b1c97e0f5de512605af6b519ffd295 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 7.8E-79 T 06-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM402_RS15460 e14f94d088b70681bfc334080eb185d4 284 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 15 278 2.5E-122 T 06-07-2017 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AM402_RS15460 e14f94d088b70681bfc334080eb185d4 284 Gene3D G3DSA:1.20.1080.10 30 280 6.3E-88 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM402_RS15460 e14f94d088b70681bfc334080eb185d4 284 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 06-07-2017 IPR024002 Formate/nitrite transporter, conserved site AM402_RS15460 e14f94d088b70681bfc334080eb185d4 284 Pfam PF01226 Formate/nitrite transporter 16 276 7.3E-76 T 06-07-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM402_RS15460 e14f94d088b70681bfc334080eb185d4 284 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 5.5E-90 T 06-07-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM402_RS15460 e14f94d088b70681bfc334080eb185d4 284 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 06-07-2017 IPR024002 Formate/nitrite transporter, conserved site AM402_RS09510 0d7febee10b90a8b10e5d51951ee0b27 313 PIRSF PIRSF026649 2 306 2.0E-96 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM402_RS09510 0d7febee10b90a8b10e5d51951ee0b27 313 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 4.0E-143 T 06-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM402_RS09510 0d7febee10b90a8b10e5d51951ee0b27 313 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 5.6E-101 T 06-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM402_RS09510 0d7febee10b90a8b10e5d51951ee0b27 313 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 51.616 T 06-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 392 5.0E-127 T 06-07-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 Gene3D G3DSA:3.50.50.60 280 317 9.2E-45 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 Gene3D G3DSA:3.50.50.60 2 181 9.2E-45 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 SUPERFAMILY SSF51905 4 178 3.46E-59 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 SUPERFAMILY SSF51905 269 384 3.46E-59 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 2.3E-18 T 06-07-2017 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 2.3E-18 T 06-07-2017 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.3E-18 T 06-07-2017 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.3E-18 T 06-07-2017 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 Pfam PF01494 FAD binding domain 4 315 4.7E-24 T 06-07-2017 IPR002938 FAD-binding domain GO:0071949 AM402_RS07680 433710f76eb3e1ae09739f0719fdbfa2 411 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 06-07-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM402_RS07960 b4434fbc23b98dc8c327d0fc0819818c 119 Pfam PF13698 Domain of unknown function (DUF4156) 19 117 5.3E-32 T 06-07-2017 IPR025294 Protein of unknown function DUF4156 AM402_RS06730 af39a211c921ad86009d383d431c738b 399 SUPERFAMILY SSF51246 320 388 9.1E-15 T 06-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM402_RS06730 af39a211c921ad86009d383d431c738b 399 Gene3D G3DSA:3.30.1490.20 125 198 5.3E-24 T 06-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM402_RS06730 af39a211c921ad86009d383d431c738b 399 Pfam PF02222 ATP-grasp domain 123 295 1.8E-56 T 06-07-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM402_RS06730 af39a211c921ad86009d383d431c738b 399 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 50.017 T 06-07-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM402_RS06730 af39a211c921ad86009d383d431c738b 399 Gene3D G3DSA:3.30.470.20 199 388 3.1E-63 T 06-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AM402_RS06730 af39a211c921ad86009d383d431c738b 399 Gene3D G3DSA:3.40.50.20 5 120 1.2E-40 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS06730 af39a211c921ad86009d383d431c738b 399 SUPERFAMILY SSF52440 3 112 1.31E-34 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS06730 af39a211c921ad86009d383d431c738b 399 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 388 9.4E-178 T 06-07-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM402_RS06730 af39a211c921ad86009d383d431c738b 399 SUPERFAMILY SSF56059 113 314 1.15E-54 T 06-07-2017 AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 SMART SM00279 161 196 1.9E-8 T 06-07-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 SUPERFAMILY SSF88723 3 158 5.23E-40 T 06-07-2017 IPR029060 PIN domain-like AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 159 248 1.3E-24 T 06-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 155 3.9E-32 T 06-07-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 Hamap MF_01192 Flap endonuclease Xni [xni]. 1 249 42.6 T 06-07-2017 IPR022895 Flap endonuclease Xni GO:0048256 AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 Gene3D G3DSA:1.10.150.20 174 234 3.1E-22 T 06-07-2017 AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 SUPERFAMILY SSF47807 158 248 5.08E-23 T 06-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 SMART SM00475 2 249 5.2E-87 T 06-07-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM402_RS06180 9d118f67f1e9405ae640cf24ffed44d7 249 Gene3D G3DSA:3.40.50.1010 3 173 1.5E-49 T 06-07-2017 IPR029060 PIN domain-like AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 Hamap MF_00625 Selenide, water dikinase [selD]. 4 346 46.335 T 06-07-2017 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 PIRSF PIRSF036407 1 346 1.8E-119 T 06-07-2017 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 312 3.1E-137 T 06-07-2017 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 339 3.3E-29 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 Gene3D G3DSA:3.30.1330.10 28 161 3.4E-32 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 SUPERFAMILY SSF56042 163 337 3.29E-51 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 SUPERFAMILY SSF55326 6 158 1.3E-40 T 06-07-2017 AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 156 8.3E-20 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS10830 ca84dc7f6725afd984b62219116e2644 347 Gene3D G3DSA:3.90.650.10 175 343 1.9E-19 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS19435 5e8898202f330104ad44cb47dd84dc5f 103 Hamap MF_00475 Trp operon repressor [trpR]. 10 103 23.751 T 06-07-2017 IPR013335 Trp repressor, bacterial GO:0006355 AM402_RS19435 5e8898202f330104ad44cb47dd84dc5f 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 9 99 4.3E-32 T 06-07-2017 IPR013335 Trp repressor, bacterial GO:0006355 AM402_RS19435 5e8898202f330104ad44cb47dd84dc5f 103 PIRSF PIRSF003196 5 103 4.7E-38 T 06-07-2017 IPR013335 Trp repressor, bacterial GO:0006355 AM402_RS19435 5e8898202f330104ad44cb47dd84dc5f 103 Gene3D G3DSA:1.10.1270.10 5 100 4.4E-40 T 06-07-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AM402_RS19435 5e8898202f330104ad44cb47dd84dc5f 103 Pfam PF01371 Trp repressor protein 12 98 1.6E-27 T 06-07-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AM402_RS19435 5e8898202f330104ad44cb47dd84dc5f 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 5 96 1.0E-31 T 06-07-2017 IPR013335 Trp repressor, bacterial GO:0006355 AM402_RS19435 5e8898202f330104ad44cb47dd84dc5f 103 SUPERFAMILY SSF48295 4 98 9.94E-28 T 06-07-2017 IPR010921 Trp repressor/replication initiator GO:0043565 AM402_RS12630 1dc1a0ecd5ba31ebcbd7977907f69ff5 197 PIRSF PIRSF001296 1 191 1.5E-70 T 06-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM402_RS12630 1dc1a0ecd5ba31ebcbd7977907f69ff5 197 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 7.0E-66 T 06-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM402_RS12630 1dc1a0ecd5ba31ebcbd7977907f69ff5 197 Pfam PF02669 K+-transporting ATPase, c chain 5 186 6.5E-65 T 06-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM402_RS12630 1dc1a0ecd5ba31ebcbd7977907f69ff5 197 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 187 31.468 T 06-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM402_RS02740 9a8fb8ebc703884495ea9133d86e8b69 438 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 10 31 5.7E-11 T 06-07-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AM402_RS02740 9a8fb8ebc703884495ea9133d86e8b69 438 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 39 58 5.7E-11 T 06-07-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AM402_RS02740 9a8fb8ebc703884495ea9133d86e8b69 438 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 5.7E-11 T 06-07-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AM402_RS02740 9a8fb8ebc703884495ea9133d86e8b69 438 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 417 437 5.7E-11 T 06-07-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AM402_RS02740 9a8fb8ebc703884495ea9133d86e8b69 438 SUPERFAMILY SSF161070 4 437 9.15E-121 T 06-07-2017 AM402_RS02740 9a8fb8ebc703884495ea9133d86e8b69 438 Pfam PF00209 Sodium:neurotransmitter symporter family 140 436 2.3E-33 T 06-07-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AM402_RS02740 9a8fb8ebc703884495ea9133d86e8b69 438 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 5.9E-20 T 06-07-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AM402_RS00055 3045e51ef992a4857992f856b7b71e35 567 Gene3D G3DSA:3.30.450.40 256 357 1.9E-4 T 06-07-2017 IPR029016 GAF domain-like AM402_RS00055 3045e51ef992a4857992f856b7b71e35 567 SMART SM00065 192 365 0.001 T 06-07-2017 IPR003018 GAF domain GO:0005515 AM402_RS00055 3045e51ef992a4857992f856b7b71e35 567 SUPERFAMILY SSF55781 232 355 9.16E-8 T 06-07-2017 IPR029016 GAF domain-like AM402_RS00055 3045e51ef992a4857992f856b7b71e35 567 SUPERFAMILY SSF55874 424 559 3.83E-12 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS00055 3045e51ef992a4857992f856b7b71e35 567 Pfam PF06580 Histidine kinase 371 447 3.1E-24 T 06-07-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AM402_RS00055 3045e51ef992a4857992f856b7b71e35 567 Gene3D G3DSA:3.30.565.10 423 561 2.0E-11 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS00055 3045e51ef992a4857992f856b7b71e35 567 Pfam PF07694 5TMR of 5TMR-LYT 27 196 1.1E-60 T 06-07-2017 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AM402_RS15615 37654aa9e5c9e9657796005080e8b73e 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 06-07-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM402_RS15615 37654aa9e5c9e9657796005080e8b73e 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 5.7E-50 T 06-07-2017 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AM402_RS15615 37654aa9e5c9e9657796005080e8b73e 87 PRINTS PR00160 Glutaredoxin signature 66 79 9.1E-13 T 06-07-2017 IPR014025 Glutaredoxin subgroup AM402_RS15615 37654aa9e5c9e9657796005080e8b73e 87 PRINTS PR00160 Glutaredoxin signature 52 65 9.1E-13 T 06-07-2017 IPR014025 Glutaredoxin subgroup AM402_RS15615 37654aa9e5c9e9657796005080e8b73e 87 PRINTS PR00160 Glutaredoxin signature 3 21 9.1E-13 T 06-07-2017 IPR014025 Glutaredoxin subgroup AM402_RS15615 37654aa9e5c9e9657796005080e8b73e 87 Gene3D G3DSA:3.40.30.10 2 81 7.4E-27 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS15615 37654aa9e5c9e9657796005080e8b73e 87 SUPERFAMILY SSF52833 3 81 3.07E-21 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS15615 37654aa9e5c9e9657796005080e8b73e 87 Pfam PF00462 Glutaredoxin 3 69 1.5E-17 T 06-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 Pfam PF01270 Glycosyl hydrolases family 8 27 339 5.3E-98 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 PRINTS PR00735 Glycosyl hydrolase family 8 signature 61 74 9.5E-28 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 PRINTS PR00735 Glycosyl hydrolase family 8 signature 119 137 9.5E-28 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 PRINTS PR00735 Glycosyl hydrolase family 8 signature 248 257 9.5E-28 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 PRINTS PR00735 Glycosyl hydrolase family 8 signature 223 234 9.5E-28 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 PRINTS PR00735 Glycosyl hydrolase family 8 signature 183 200 9.5E-28 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 PRINTS PR00735 Glycosyl hydrolase family 8 signature 326 340 9.5E-28 T 06-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 Gene3D G3DSA:1.50.10.10 6 340 7.7E-82 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 119 137 - T 06-07-2017 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AM402_RS02035 2b90153ebc12636be2111275089233d3 345 SUPERFAMILY SSF48208 34 341 1.49E-85 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM402_RS18575 0d302d4673946c092639db473602e7d9 307 Pfam PF09375 Imelysin 64 288 8.0E-8 T 06-07-2017 AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1222 1245 1.1E-5 T 06-07-2017 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 SUPERFAMILY SSF48239 1220 1475 2.69E-40 T 06-07-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 Gene3D G3DSA:1.50.10.20 1219 1470 9.2E-34 T 06-07-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 PIRSF PIRSF038980 12 1696 0.0 T 06-07-2017 IPR026284 Alpha-2-macroglobulin domain protein, bacteria AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 Pfam PF00207 Alpha-2-macroglobulin family 1018 1097 6.1E-6 T 06-07-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 798 946 1.1E-13 T 06-07-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 327 419 9.9E-20 T 06-07-2017 IPR021868 Alpha-2-macroglobulin MG1 domain AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 Pfam PF01835 MG2 domain 425 516 1.2E-14 T 06-07-2017 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 SMART SM01360 1011 1100 5.6E-16 T 06-07-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 AM402_RS08610 abcadf5907c52be58fa9bf8691c096bb 1696 SMART SM01359 797 946 5.2E-35 T 06-07-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM402_RS11475 463ef39dc741770ff5e1eec9b0762cb6 458 SMART SM00382 200 401 6.0E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS11475 463ef39dc741770ff5e1eec9b0762cb6 458 SUPERFAMILY SSF52540 279 438 3.22E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11475 463ef39dc741770ff5e1eec9b0762cb6 458 SUPERFAMILY SSF52540 185 252 3.22E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11475 463ef39dc741770ff5e1eec9b0762cb6 458 Pfam PF03796 DnaB-like helicase C terminal domain 186 432 2.8E-78 T 06-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM402_RS11475 463ef39dc741770ff5e1eec9b0762cb6 458 Pfam PF00772 DnaB-like helicase N terminal domain 8 109 6.2E-20 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS11475 463ef39dc741770ff5e1eec9b0762cb6 458 Gene3D G3DSA:3.40.50.300 184 430 2.9E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11475 463ef39dc741770ff5e1eec9b0762cb6 458 SUPERFAMILY SSF48024 7 115 6.41E-20 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS11475 463ef39dc741770ff5e1eec9b0762cb6 458 Gene3D G3DSA:1.10.860.10 8 109 5.2E-22 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM402_RS04150 229477647b98bf2131d39e705a2bd5bb 571 Pfam PF00263 Bacterial type II and III secretion system protein 374 536 3.3E-35 T 06-07-2017 IPR004846 Type II/III secretion system GO:0009306 AM402_RS04150 229477647b98bf2131d39e705a2bd5bb 571 Pfam PF03958 Bacterial type II/III secretion system short domain 201 320 1.4E-8 T 06-07-2017 IPR005644 NolW-like AM402_RS04150 229477647b98bf2131d39e705a2bd5bb 571 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 213 230 1.1E-34 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM402_RS04150 229477647b98bf2131d39e705a2bd5bb 571 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 421 436 1.1E-34 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM402_RS04150 229477647b98bf2131d39e705a2bd5bb 571 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 515 534 1.1E-34 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM402_RS04150 229477647b98bf2131d39e705a2bd5bb 571 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 322 342 1.1E-34 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM402_RS04150 229477647b98bf2131d39e705a2bd5bb 571 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 387 406 1.1E-34 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM402_RS04150 229477647b98bf2131d39e705a2bd5bb 571 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 41 537 1.6E-124 T 06-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM402_RS18695 dd8387f293f93b486ec84d1fb8025795 446 PIRSF PIRSF006603 3 446 1.8E-74 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM402_RS18695 dd8387f293f93b486ec84d1fb8025795 446 Pfam PF01554 MatE 17 176 1.1E-28 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM402_RS18695 dd8387f293f93b486ec84d1fb8025795 446 Pfam PF01554 MatE 242 402 2.2E-24 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM402_RS18695 dd8387f293f93b486ec84d1fb8025795 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 2.3E-60 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM402_RS08895 d0476ff94ffb79fda41a1038be3162ba 180 SMART SM00463 95 173 1.2E-17 T 06-07-2017 IPR002625 Smr domain AM402_RS08895 d0476ff94ffb79fda41a1038be3162ba 180 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 39.036 T 06-07-2017 IPR022990 Uncharacterised protein family UPF0115 AM402_RS08895 d0476ff94ffb79fda41a1038be3162ba 180 Pfam PF01713 Smr domain 98 170 9.3E-15 T 06-07-2017 IPR002625 Smr domain AM402_RS08895 d0476ff94ffb79fda41a1038be3162ba 180 SUPERFAMILY SSF160443 96 150 8.11E-8 T 06-07-2017 IPR002625 Smr domain AM402_RS03750 02741f9dd7359e21f71c6efcf220656f 90 Gene3D G3DSA:4.10.520.10 1 90 9.4E-39 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS03750 02741f9dd7359e21f71c6efcf220656f 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM402_RS03750 02741f9dd7359e21f71c6efcf220656f 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.8E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS03750 02741f9dd7359e21f71c6efcf220656f 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.8E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS03750 02741f9dd7359e21f71c6efcf220656f 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.8E-20 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS03750 02741f9dd7359e21f71c6efcf220656f 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.5E-35 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS03750 02741f9dd7359e21f71c6efcf220656f 90 SUPERFAMILY SSF47729 1 90 1.91E-33 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS03750 02741f9dd7359e21f71c6efcf220656f 90 SMART SM00411 1 90 2.6E-45 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS18285 21b671a3af4e36eff235b0f0dd298842 375 Gene3D G3DSA:3.40.50.1980 184 339 8.1E-26 T 06-07-2017 AM402_RS18285 21b671a3af4e36eff235b0f0dd298842 375 Gene3D G3DSA:3.40.50.1980 40 179 1.1E-13 T 06-07-2017 AM402_RS18285 21b671a3af4e36eff235b0f0dd298842 375 SUPERFAMILY SSF53807 26 341 2.43E-44 T 06-07-2017 AM402_RS18285 21b671a3af4e36eff235b0f0dd298842 375 Pfam PF01497 Periplasmic binding protein 90 284 2.6E-18 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM402_RS03475 1f83083d1eab989b130d5e0b089cdd56 207 SUPERFAMILY SSF52833 21 203 6.28E-41 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS03475 1f83083d1eab989b130d5e0b089cdd56 207 PIRSF PIRSF001488 1 207 6.3E-77 T 06-07-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AM402_RS03475 1f83083d1eab989b130d5e0b089cdd56 207 Pfam PF01323 DSBA-like thioredoxin domain 40 195 7.7E-25 T 06-07-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM402_RS03475 1f83083d1eab989b130d5e0b089cdd56 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AM402_RS03475 1f83083d1eab989b130d5e0b089cdd56 207 Gene3D G3DSA:3.40.30.10 24 206 9.6E-59 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS08295 8f34decb3fda1a49b2dac48a8dbe34af 558 SMART SM00382 101 473 9.4E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS08295 8f34decb3fda1a49b2dac48a8dbe34af 558 Gene3D G3DSA:3.40.50.300 208 466 3.7E-28 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08295 8f34decb3fda1a49b2dac48a8dbe34af 558 Gene3D G3DSA:3.40.50.300 82 160 3.7E-28 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08295 8f34decb3fda1a49b2dac48a8dbe34af 558 Pfam PF13175 AAA ATPase domain 90 449 1.1E-28 T 06-07-2017 AM402_RS08295 8f34decb3fda1a49b2dac48a8dbe34af 558 SUPERFAMILY SSF52540 81 201 1.39E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08295 8f34decb3fda1a49b2dac48a8dbe34af 558 SUPERFAMILY SSF52540 303 461 1.39E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15820 39f34be16cedb44ec0b46b75d7e7d47f 168 Gene3D G3DSA:1.20.1260.10 2 167 2.4E-52 T 06-07-2017 IPR012347 Ferritin-related AM402_RS15820 39f34be16cedb44ec0b46b75d7e7d47f 168 Pfam PF00210 Ferritin-like domain 30 167 5.7E-25 T 06-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM402_RS15820 39f34be16cedb44ec0b46b75d7e7d47f 168 SUPERFAMILY SSF47240 12 167 1.8E-49 T 06-07-2017 IPR009078 Ferritin-like superfamily AM402_RS15820 39f34be16cedb44ec0b46b75d7e7d47f 168 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 8.3E-13 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM402_RS15820 39f34be16cedb44ec0b46b75d7e7d47f 168 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 8.3E-13 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM402_RS15820 39f34be16cedb44ec0b46b75d7e7d47f 168 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 8.3E-13 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM402_RS15820 39f34be16cedb44ec0b46b75d7e7d47f 168 PIRSF PIRSF005900 8 168 6.6E-44 T 06-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM402_RS15820 39f34be16cedb44ec0b46b75d7e7d47f 168 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 06-07-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM402_RS15845 84d25109afdb9a903cbb65b7a87eed2a 391 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS15845 84d25109afdb9a903cbb65b7a87eed2a 391 PIRSF PIRSF001434 1 390 4.0E-117 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS15845 84d25109afdb9a903cbb65b7a87eed2a 391 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 386 3.0E-101 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS15845 84d25109afdb9a903cbb65b7a87eed2a 391 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 388 8.8E-116 T 06-07-2017 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AM402_RS15845 84d25109afdb9a903cbb65b7a87eed2a 391 Gene3D G3DSA:3.40.640.10 6 255 8.5E-68 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS15845 84d25109afdb9a903cbb65b7a87eed2a 391 SUPERFAMILY SSF53383 26 387 7.16E-88 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS15845 84d25109afdb9a903cbb65b7a87eed2a 391 Gene3D G3DSA:3.90.1150.10 256 389 1.7E-37 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS20835 95e0d31e763770fadeed561757a3f204 322 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 223 315 7.1E-20 T 06-07-2017 IPR013615 CbbQ/NirQ/NorQ, C-terminal AM402_RS20835 95e0d31e763770fadeed561757a3f204 322 SUPERFAMILY SSF52540 35 289 3.58E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20835 95e0d31e763770fadeed561757a3f204 322 Gene3D G3DSA:3.40.50.300 35 239 6.2E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20835 95e0d31e763770fadeed561757a3f204 322 Pfam PF07728 AAA domain (dynein-related subfamily) 64 188 1.9E-16 T 06-07-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM402_RS14585 d5b253247ac13e90400e683993a9be54 577 Gene3D G3DSA:3.40.720.10 260 511 8.9E-19 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS14585 d5b253247ac13e90400e683993a9be54 577 SUPERFAMILY SSF53649 258 544 1.36E-33 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS14585 d5b253247ac13e90400e683993a9be54 577 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 1.0E-106 T 06-07-2017 IPR024588 Inner membrane protein YejM, N-terminal AM402_RS14585 d5b253247ac13e90400e683993a9be54 577 Pfam PF00884 Sulfatase 408 493 5.9E-9 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM402_RS16975 e4407fa2497b3da776dd6a48b3b8b69d 227 SMART SM01144 27 219 1.0E-68 T 06-07-2017 IPR005636 DTW AM402_RS16975 e4407fa2497b3da776dd6a48b3b8b69d 227 Pfam PF03942 DTW domain 29 214 6.8E-42 T 06-07-2017 IPR005636 DTW AM402_RS18100 5223c6aebbca56462f970976194ee41e 450 Gene3D G3DSA:1.20.1600.10 21 435 1.2E-67 T 06-07-2017 AM402_RS18100 5223c6aebbca56462f970976194ee41e 450 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 449 2.6E-84 T 06-07-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AM402_RS18100 5223c6aebbca56462f970976194ee41e 450 Pfam PF02321 Outer membrane efflux protein 25 222 2.9E-20 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM402_RS18100 5223c6aebbca56462f970976194ee41e 450 Pfam PF02321 Outer membrane efflux protein 250 435 3.2E-35 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM402_RS18100 5223c6aebbca56462f970976194ee41e 450 SUPERFAMILY SSF56954 1 437 2.35E-79 T 06-07-2017 AM402_RS04665 072f58b380aac8ebda0331ab13c7c2f5 588 Pfam PF00005 ABC transporter 354 503 3.3E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS04665 072f58b380aac8ebda0331ab13c7c2f5 588 Pfam PF00664 ABC transporter transmembrane region 24 294 3.2E-23 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS04665 072f58b380aac8ebda0331ab13c7c2f5 588 SUPERFAMILY SSF90123 19 320 1.31E-51 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS04665 072f58b380aac8ebda0331ab13c7c2f5 588 SUPERFAMILY SSF52540 328 571 2.37E-83 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04665 072f58b380aac8ebda0331ab13c7c2f5 588 Gene3D G3DSA:1.20.1560.10 20 319 2.2E-44 T 06-07-2017 AM402_RS04665 072f58b380aac8ebda0331ab13c7c2f5 588 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS04665 072f58b380aac8ebda0331ab13c7c2f5 588 Gene3D G3DSA:3.40.50.300 339 575 6.0E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04665 072f58b380aac8ebda0331ab13c7c2f5 588 SMART SM00382 363 549 2.3E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS20535 7a400cbe92bd113120dd891b7334a2d0 289 SUPERFAMILY SSF51182 8 288 1.63E-75 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS20535 7a400cbe92bd113120dd891b7334a2d0 289 PIRSF PIRSF006232 2 289 8.1E-83 T 06-07-2017 IPR012093 Pirin AM402_RS20535 7a400cbe92bd113120dd891b7334a2d0 289 Pfam PF02678 Pirin 22 129 1.9E-31 T 06-07-2017 IPR003829 Pirin, N-terminal domain AM402_RS20535 7a400cbe92bd113120dd891b7334a2d0 289 Pfam PF05726 Pirin C-terminal cupin domain 185 286 1.5E-26 T 06-07-2017 IPR008778 Pirin, C-terminal domain AM402_RS20535 7a400cbe92bd113120dd891b7334a2d0 289 Gene3D G3DSA:2.60.120.10 6 259 3.2E-74 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS07860 98aa359a6d9e62c8ee21bac354db1d41 143 SUPERFAMILY SSF55166 4 141 3.06E-11 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 AM402_RS07860 98aa359a6d9e62c8ee21bac354db1d41 143 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 57 141 1.3E-5 T 06-07-2017 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 409 455 1.4E-5 T 06-07-2017 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 Pfam PF08548 Peptidase M10 serralysin C terminal 258 491 8.0E-79 T 06-07-2017 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 PIRSF PIRSF001205 5 491 2.4E-198 T 06-07-2017 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 Gene3D G3DSA:2.150.10.10 264 453 4.0E-28 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 SMART SM00235 48 242 2.1E-33 T 06-07-2017 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 SUPERFAMILY SSF55486 11 256 8.81E-66 T 06-07-2017 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 SUPERFAMILY SSF51120 259 488 7.72E-39 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 PRINTS PR00313 NodO calcium binding signature 379 387 1.1E-10 T 06-07-2017 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 PRINTS PR00313 NodO calcium binding signature 340 351 1.1E-10 T 06-07-2017 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 PRINTS PR00313 NodO calcium binding signature 388 397 1.1E-10 T 06-07-2017 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 PRINTS PR00313 NodO calcium binding signature 361 369 1.1E-10 T 06-07-2017 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 Gene3D G3DSA:3.40.390.10 34 260 1.3E-42 T 06-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM402_RS18085 6a0c8af8a46d024c5b461bd6d3c5cfa9 491 Pfam PF00413 Matrixin 88 199 1.9E-7 T 06-07-2017 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AM402_RS15890 b51290a2577d053fb1939b348e607da6 328 Gene3D G3DSA:2.40.50.100 43 76 4.2E-15 T 06-07-2017 AM402_RS15890 b51290a2577d053fb1939b348e607da6 328 Gene3D G3DSA:2.40.50.100 203 234 4.2E-15 T 06-07-2017 AM402_RS15890 b51290a2577d053fb1939b348e607da6 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 318 1.5E-14 T 06-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM402_RS15890 b51290a2577d053fb1939b348e607da6 328 SUPERFAMILY SSF111369 172 291 5.23E-14 T 06-07-2017 AM402_RS15890 b51290a2577d053fb1939b348e607da6 328 SUPERFAMILY SSF111369 41 112 8.37E-7 T 06-07-2017 AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 499 2.7E-107 T 06-07-2017 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 Gene3D G3DSA:1.20.1250.20 336 497 3.6E-4 T 06-07-2017 AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 Gene3D G3DSA:1.20.1250.20 258 289 3.6E-4 T 06-07-2017 AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 Gene3D G3DSA:1.20.1250.20 24 207 5.1E-19 T 06-07-2017 AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 SUPERFAMILY SSF103473 334 497 1.83E-9 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 Pfam PF00854 POT family 91 459 2.1E-63 T 06-07-2017 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 SUPERFAMILY SSF103473 10 311 1.2E-27 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM402_RS09500 2a62c881015419a6a755c3c1af9dc309 511 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 78 102 - T 06-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AM402_RS03435 75338c076ef483b7e3976936d4468473 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS03435 75338c076ef483b7e3976936d4468473 280 Gene3D G3DSA:3.40.50.150 1 280 9.2E-118 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS03435 75338c076ef483b7e3976936d4468473 280 SUPERFAMILY SSF53335 9 279 4.57E-97 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS03435 75338c076ef483b7e3976936d4468473 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS03435 75338c076ef483b7e3976936d4468473 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 2.8E-109 T 06-07-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM402_RS03435 75338c076ef483b7e3976936d4468473 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.444 T 06-07-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM402_RS17810 b72fb4f3f1879c122c513510b237bbdd 471 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 5 461 2.2E-161 T 06-07-2017 IPR021207 Integrating conjugative element protein, PFL4705 AM402_RS03405 a30cbd1b56f2b5ac5b636fdf5deb2e17 564 Pfam PF05860 haemagglutination activity domain 32 140 1.5E-21 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS03405 a30cbd1b56f2b5ac5b636fdf5deb2e17 564 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 65 128 2.9E-16 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS03405 a30cbd1b56f2b5ac5b636fdf5deb2e17 564 SMART SM00912 23 147 1.5E-6 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS03405 a30cbd1b56f2b5ac5b636fdf5deb2e17 564 Gene3D G3DSA:2.160.20.10 36 264 2.9E-45 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS03405 a30cbd1b56f2b5ac5b636fdf5deb2e17 564 Gene3D G3DSA:2.160.20.10 378 400 2.9E-45 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS03405 a30cbd1b56f2b5ac5b636fdf5deb2e17 564 SUPERFAMILY SSF51126 40 216 4.08E-21 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS00895 fd55241d40001ae4e6726e07d44566b2 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.264 T 06-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00895 fd55241d40001ae4e6726e07d44566b2 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 06-07-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00895 fd55241d40001ae4e6726e07d44566b2 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.3E-33 T 06-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00895 fd55241d40001ae4e6726e07d44566b2 118 Gene3D G3DSA:4.10.910.10 72 118 7.5E-26 T 06-07-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00895 fd55241d40001ae4e6726e07d44566b2 118 Gene3D G3DSA:1.10.8.50 2 71 1.0E-29 T 06-07-2017 AM402_RS00895 fd55241d40001ae4e6726e07d44566b2 118 PIRSF PIRSF002134 1 118 4.1E-42 T 06-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00895 fd55241d40001ae4e6726e07d44566b2 118 SUPERFAMILY SSF46946 2 114 3.77E-46 T 06-07-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM402_RS00895 fd55241d40001ae4e6726e07d44566b2 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.2E-53 T 06-07-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS20005 2b2f6de894a07f8223efcb865187be00 208 Pfam PF07947 YhhN-like protein 26 205 5.4E-29 T 06-07-2017 IPR012506 YhhN-like GO:0016021 AM402_RS20320 6a0947bb1e5c0d59dbe500f76ef10dbb 213 SUPERFAMILY SSF55718 20 125 1.44E-8 T 06-07-2017 IPR003033 SCP2 sterol-binding domain AM402_RS20320 6a0947bb1e5c0d59dbe500f76ef10dbb 213 Pfam PF02036 SCP-2 sterol transfer family 27 125 2.2E-19 T 06-07-2017 IPR003033 SCP2 sterol-binding domain AM402_RS08430 c2e645a6ec1851abc4cb1fa34a6ef3f6 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 3.0E-103 T 06-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM402_RS08430 c2e645a6ec1851abc4cb1fa34a6ef3f6 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.139 T 06-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM402_RS08430 c2e645a6ec1851abc4cb1fa34a6ef3f6 243 Gene3D G3DSA:3.20.20.70 3 242 1.6E-112 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS08430 c2e645a6ec1851abc4cb1fa34a6ef3f6 243 SUPERFAMILY SSF63892 4 242 3.92E-102 T 06-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM402_RS08430 c2e645a6ec1851abc4cb1fa34a6ef3f6 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.9E-105 T 06-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM402_RS09920 42f499fef29a05f7ab1e6624f31a40ba 144 PRINTS PR01438 Universal stress protein signature 2 20 1.9E-8 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS09920 42f499fef29a05f7ab1e6624f31a40ba 144 PRINTS PR01438 Universal stress protein signature 105 117 1.9E-8 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS09920 42f499fef29a05f7ab1e6624f31a40ba 144 PRINTS PR01438 Universal stress protein signature 122 144 1.9E-8 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS09920 42f499fef29a05f7ab1e6624f31a40ba 144 Pfam PF00582 Universal stress protein family 1 144 4.1E-19 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS09920 42f499fef29a05f7ab1e6624f31a40ba 144 SUPERFAMILY SSF52402 2 144 1.42E-23 T 06-07-2017 AM402_RS09920 42f499fef29a05f7ab1e6624f31a40ba 144 Gene3D G3DSA:3.40.50.620 2 144 2.0E-28 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS19695 52e9b213ebb4e7ec9670ada081cf56e8 420 SUPERFAMILY SSF55205 1 417 4.91E-146 T 06-07-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM402_RS19695 52e9b213ebb4e7ec9670ada081cf56e8 420 Gene3D G3DSA:3.65.10.10 21 218 6.7E-69 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AM402_RS19695 52e9b213ebb4e7ec9670ada081cf56e8 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 6.4E-126 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AM402_RS19695 52e9b213ebb4e7ec9670ada081cf56e8 420 Gene3D G3DSA:3.65.10.10 219 415 3.2E-62 T 06-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AM402_RS19695 52e9b213ebb4e7ec9670ada081cf56e8 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 46.719 T 06-07-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS19695 52e9b213ebb4e7ec9670ada081cf56e8 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 5.0E-185 T 06-07-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 8.5E-217 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 7.0E-121 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 7.0E-121 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 7.0E-121 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 7.0E-121 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 7.0E-121 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 7.0E-121 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 7.0E-121 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 7.0E-121 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS07045 72b749e308e3e8c6451eb51569d98db5 429 Pfam PF02040 Arsenical pump membrane protein 4 423 2.0E-163 T 06-07-2017 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM402_RS01610 4892bcda2b91651184b186f48ce42896 367 SUPERFAMILY SSF53756 3 366 1.26E-46 T 06-07-2017 AM402_RS01610 4892bcda2b91651184b186f48ce42896 367 Gene3D G3DSA:3.40.50.2000 180 287 1.2E-15 T 06-07-2017 AM402_RS01610 4892bcda2b91651184b186f48ce42896 367 Pfam PF13439 Glycosyltransferase Family 4 14 164 6.5E-9 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM402_RS01610 4892bcda2b91651184b186f48ce42896 367 Pfam PF00534 Glycosyl transferases group 1 176 331 8.9E-18 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS15695 f05e0f6a33e4f81bc295b3a05563d322 205 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 104 4.0E-21 T 06-07-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM402_RS15695 f05e0f6a33e4f81bc295b3a05563d322 205 SUPERFAMILY SSF101386 113 201 2.83E-24 T 06-07-2017 AM402_RS15695 f05e0f6a33e4f81bc295b3a05563d322 205 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 111 197 18.766 T 06-07-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM402_RS15695 f05e0f6a33e4f81bc295b3a05563d322 205 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 7 202 37.579 T 06-07-2017 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AM402_RS15695 f05e0f6a33e4f81bc295b3a05563d322 205 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 114 197 8.0E-30 T 06-07-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM402_RS15695 f05e0f6a33e4f81bc295b3a05563d322 205 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 115 201 4.3E-16 T 06-07-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AM402_RS15695 f05e0f6a33e4f81bc295b3a05563d322 205 SUPERFAMILY SSF141734 6 117 2.48E-44 T 06-07-2017 AM402_RS15695 f05e0f6a33e4f81bc295b3a05563d322 205 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 104 2.2E-30 T 06-07-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM402_RS18640 147a74c7f2f378f2b162da057c720228 180 Pfam PF00156 Phosphoribosyl transferase domain 13 162 3.3E-24 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM402_RS18640 147a74c7f2f378f2b162da057c720228 180 SUPERFAMILY SSF53271 2 175 2.49E-53 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS18640 147a74c7f2f378f2b162da057c720228 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 175 2.3E-73 T 06-07-2017 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AM402_RS18640 147a74c7f2f378f2b162da057c720228 180 Gene3D G3DSA:3.40.50.2020 2 175 3.3E-76 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS12595 35432b84563861e75c2de7204b2f50dc 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0021 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS12595 35432b84563861e75c2de7204b2f50dc 205 SUPERFAMILY SSF54862 3 198 1.26E-68 T 06-07-2017 AM402_RS12595 35432b84563861e75c2de7204b2f50dc 205 Pfam PF13247 4Fe-4S dicluster domain 59 152 3.8E-27 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS12595 35432b84563861e75c2de7204b2f50dc 205 Gene3D G3DSA:3.30.70.20 75 125 1.0E-26 T 06-07-2017 AM402_RS12595 35432b84563861e75c2de7204b2f50dc 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS12595 35432b84563861e75c2de7204b2f50dc 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 3.3E-77 T 06-07-2017 IPR014297 Dimethylsulphoxide reductase, chain B AM402_RS12595 35432b84563861e75c2de7204b2f50dc 205 Gene3D G3DSA:3.30.70.20 4 74 2.9E-31 T 06-07-2017 AM402_RS12595 35432b84563861e75c2de7204b2f50dc 205 Gene3D G3DSA:3.30.70.20 126 187 2.9E-31 T 06-07-2017 AM402_RS00830 63a1484818e91250f8becfd68444b772 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 105 143 1.3E-13 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS00830 63a1484818e91250f8becfd68444b772 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 50 8.7E-15 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS00830 63a1484818e91250f8becfd68444b772 185 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 63 99 9.8E-15 T 06-07-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM402_RS00830 63a1484818e91250f8becfd68444b772 185 SUPERFAMILY SSF57783 61 102 6.97E-12 T 06-07-2017 AM402_RS00830 63a1484818e91250f8becfd68444b772 185 SUPERFAMILY SSF57783 12 50 2.89E-12 T 06-07-2017 AM402_RS00830 63a1484818e91250f8becfd68444b772 185 Gene3D G3DSA:3.30.65.10 61 97 1.3E-12 T 06-07-2017 AM402_RS00830 63a1484818e91250f8becfd68444b772 185 Gene3D G3DSA:3.30.65.10 103 136 1.5E-6 T 06-07-2017 AM402_RS00830 63a1484818e91250f8becfd68444b772 185 Gene3D G3DSA:3.30.65.10 13 49 3.0E-13 T 06-07-2017 AM402_RS05025 059616dc186992729fec3a9381970a2b 158 Gene3D G3DSA:3.40.1400.10 1 133 4.5E-37 T 06-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM402_RS05025 059616dc186992729fec3a9381970a2b 158 Pfam PF02502 Ribose/Galactose Isomerase 6 132 3.2E-33 T 06-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM402_RS05025 059616dc186992729fec3a9381970a2b 158 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 132 2.5E-27 T 06-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM402_RS05025 059616dc186992729fec3a9381970a2b 158 PIRSF PIRSF005384 4 143 4.2E-34 T 06-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM402_RS05025 059616dc186992729fec3a9381970a2b 158 SUPERFAMILY SSF89623 5 135 1.44E-33 T 06-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM402_RS12795 51637bc76c8eef2b1c2cde50846de5c5 332 Pfam PF00419 Fimbrial protein 193 332 2.7E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS12795 51637bc76c8eef2b1c2cde50846de5c5 332 Gene3D G3DSA:2.60.40.1090 200 332 2.4E-15 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS12795 51637bc76c8eef2b1c2cde50846de5c5 332 SUPERFAMILY SSF49401 201 332 1.09E-13 T 06-07-2017 IPR008966 Adhesion domain AM402_RS01680 71861a928f344ea177190059e595ec10 321 Pfam PF04748 Divergent polysaccharide deacetylase 35 244 1.1E-78 T 06-07-2017 IPR006837 Divergent polysaccharide deacetylase AM402_RS01680 71861a928f344ea177190059e595ec10 321 Gene3D G3DSA:3.20.20.370 21 249 2.4E-102 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM402_RS01680 71861a928f344ea177190059e595ec10 321 SUPERFAMILY SSF88713 32 245 9.56E-73 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM402_RS13090 bd638bb7416f0cbf9ad48c5792974f7e 184 SUPERFAMILY SSF54593 4 183 6.75E-62 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM402_RS13090 bd638bb7416f0cbf9ad48c5792974f7e 184 Gene3D G3DSA:3.10.180.10 8 183 2.7E-67 T 06-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM402_RS13090 bd638bb7416f0cbf9ad48c5792974f7e 184 Pfam PF06185 YecM protein 11 183 2.6E-67 T 06-07-2017 IPR010393 Protein of unknown function DUF991 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 Pfam PF07687 Peptidase dimerisation domain 178 289 3.6E-24 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 SUPERFAMILY SSF55031 181 296 1.02E-22 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 Gene3D G3DSA:3.40.630.10 7 189 5.5E-63 T 06-07-2017 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 Gene3D G3DSA:3.40.630.10 323 381 5.5E-63 T 06-07-2017 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 Pfam PF01546 Peptidase family M20/M25/M40 76 379 1.5E-35 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 63.979 T 06-07-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 Gene3D G3DSA:3.30.70.360 190 290 3.5E-27 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 SUPERFAMILY SSF53187 305 381 4.0E-60 T 06-07-2017 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 SUPERFAMILY SSF53187 3 180 4.0E-60 T 06-07-2017 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 6.3E-151 T 06-07-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM402_RS01155 9f8a459793245e9dbf93bdbaf4b29bfa 387 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 06-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM402_RS08450 74cb15a93e60bf9a76e3d448be90ab06 182 Pfam PF00419 Fimbrial protein 33 182 9.3E-17 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08450 74cb15a93e60bf9a76e3d448be90ab06 182 Gene3D G3DSA:2.60.40.1090 29 182 2.1E-36 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08450 74cb15a93e60bf9a76e3d448be90ab06 182 SUPERFAMILY SSF49401 31 182 7.95E-32 T 06-07-2017 IPR008966 Adhesion domain AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 Pfam PF09278 MerR, DNA binding 51 113 3.8E-18 T 06-07-2017 IPR015358 Transcription regulator MerR, DNA binding AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 SUPERFAMILY SSF46955 8 129 4.4E-29 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 Gene3D G3DSA:1.10.1660.10 7 62 2.1E-23 T 06-07-2017 AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 SMART SM00422 8 77 2.6E-28 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 2.0E-25 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 2.0E-25 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 2.0E-25 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 Gene3D G3DSA:1.10.1660.10 63 136 1.3E-26 T 06-07-2017 AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 3.6E-55 T 06-07-2017 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 AM402_RS21805 8cddeb3394d125256d9a19c0b17af202 144 Pfam PF00376 MerR family regulatory protein 9 46 8.8E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS00825 778aeeccd4333eb9a3b337c3771af76f 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 6 187 41.133 T 06-07-2017 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AM402_RS00825 778aeeccd4333eb9a3b337c3771af76f 189 SUPERFAMILY SSF55821 8 186 2.38E-54 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AM402_RS00825 778aeeccd4333eb9a3b337c3771af76f 189 Pfam PF01300 Telomere recombination 14 187 1.1E-42 T 06-07-2017 IPR006070 YrdC-like domain GO:0003725 AM402_RS00825 778aeeccd4333eb9a3b337c3771af76f 189 Gene3D G3DSA:3.90.870.10 10 189 9.7E-55 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AM402_RS16075 d5bc48522e159e7c92cfa9daf42328db 296 Gene3D G3DSA:1.20.120.330 157 255 2.3E-10 T 06-07-2017 AM402_RS16075 d5bc48522e159e7c92cfa9daf42328db 296 SUPERFAMILY SSF81301 1 136 5.72E-29 T 06-07-2017 AM402_RS16075 d5bc48522e159e7c92cfa9daf42328db 296 Pfam PF04439 Streptomycin adenylyltransferase 5 256 1.8E-42 T 06-07-2017 IPR007530 Aminoglycoside 6-adenylyltransferase AM402_RS16075 d5bc48522e159e7c92cfa9daf42328db 296 SUPERFAMILY SSF81631 146 254 5.02E-24 T 06-07-2017 AM402_RS16075 d5bc48522e159e7c92cfa9daf42328db 296 Gene3D G3DSA:3.30.460.10 10 156 6.1E-27 T 06-07-2017 AM402_RS06300 dd356ade138aceef502a16dd2a5ae467 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 7 145 7.0E-61 T 06-07-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS06300 dd356ade138aceef502a16dd2a5ae467 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 7 148 37.837 T 06-07-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS06300 dd356ade138aceef502a16dd2a5ae467 150 Pfam PF07977 FabA-like domain 16 141 7.0E-40 T 06-07-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS06300 dd356ade138aceef502a16dd2a5ae467 150 SUPERFAMILY SSF54637 6 146 1.42E-50 T 06-07-2017 IPR029069 HotDog domain AM402_RS06300 dd356ade138aceef502a16dd2a5ae467 150 Gene3D G3DSA:3.10.129.10 4 147 6.2E-59 T 06-07-2017 IPR029069 HotDog domain AM402_RS11925 30dad0d11c892914562bff3894c31dc8 109 Pfam PF04269 Protein of unknown function, DUF440 9 108 4.2E-40 T 06-07-2017 IPR007376 dsDNA mimic, putative AM402_RS11925 30dad0d11c892914562bff3894c31dc8 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 9 109 2.0E-24 T 06-07-2017 IPR007376 dsDNA mimic, putative AM402_RS11925 30dad0d11c892914562bff3894c31dc8 109 PIRSF PIRSF004916 1 109 6.3E-37 T 06-07-2017 IPR007376 dsDNA mimic, putative AM402_RS11925 30dad0d11c892914562bff3894c31dc8 109 SUPERFAMILY SSF102816 3 108 1.31E-34 T 06-07-2017 IPR007376 dsDNA mimic, putative AM402_RS11925 30dad0d11c892914562bff3894c31dc8 109 Gene3D G3DSA:3.10.450.140 10 108 4.0E-37 T 06-07-2017 IPR007376 dsDNA mimic, putative AM402_RS15340 d0b399e6f8afe1263a40f12655fed16f 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 2.7E-59 T 06-07-2017 IPR010275 Protein of unknown function DUF882 AM402_RS15340 d0b399e6f8afe1263a40f12655fed16f 182 Gene3D G3DSA:3.30.1380.10 56 182 4.9E-27 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 AM402_RS15340 d0b399e6f8afe1263a40f12655fed16f 182 SUPERFAMILY SSF55166 67 182 4.19E-30 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 AM402_RS19825 c3a0b9aece15c36c9eeb17762e7af209 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.7E-176 T 06-07-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM402_RS19825 c3a0b9aece15c36c9eeb17762e7af209 489 Gene3D G3DSA:2.40.50.140 30 128 1.5E-33 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS19825 c3a0b9aece15c36c9eeb17762e7af209 489 SMART SM00316 37 122 2.8E-8 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS19825 c3a0b9aece15c36c9eeb17762e7af209 489 Pfam PF00575 S1 RNA binding domain 38 109 3.0E-5 T 06-07-2017 IPR003029 S1 domain GO:0003676 AM402_RS19825 c3a0b9aece15c36c9eeb17762e7af209 489 SUPERFAMILY SSF50249 39 128 4.34E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS19825 c3a0b9aece15c36c9eeb17762e7af209 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.8E-104 T 06-07-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM402_RS09330 a46bd46a4f021af028f210501d24e02f 149 Pfam PF03245 Bacteriophage Rz lysis protein 30 147 5.4E-18 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 AM402_RS00670 b93a37d9a29b0631d7c67b05db9bd682 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 64.903 T 06-07-2017 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 AM402_RS00670 b93a37d9a29b0631d7c67b05db9bd682 376 SUPERFAMILY SSF53756 2 371 2.51E-139 T 06-07-2017 AM402_RS00670 b93a37d9a29b0631d7c67b05db9bd682 376 Gene3D G3DSA:3.40.50.2000 2 210 1.1E-87 T 06-07-2017 AM402_RS00670 b93a37d9a29b0631d7c67b05db9bd682 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 2.9E-125 T 06-07-2017 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AM402_RS00670 b93a37d9a29b0631d7c67b05db9bd682 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 2.1E-170 T 06-07-2017 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 AM402_RS00670 b93a37d9a29b0631d7c67b05db9bd682 376 Gene3D G3DSA:3.40.50.2000 211 371 2.0E-66 T 06-07-2017 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 SUPERFAMILY SSF81336 98 268 1.02E-48 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 269 4.7E-42 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 Gene3D G3DSA:1.20.120.220 99 274 6.1E-58 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 06-07-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 Pfam PF00119 ATP synthase A chain 50 268 3.7E-55 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 21 274 15.622 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 1.1E-14 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 1.1E-14 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AM402_RS02315 286effb605e460f5765a3236c1c8959c 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 1.1E-14 T 06-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AM402_RS09105 225704f77109b0198eaf5d719151231f 305 Gene3D G3DSA:3.40.190.10 197 245 9.2E-9 T 06-07-2017 AM402_RS09105 225704f77109b0198eaf5d719151231f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS09105 225704f77109b0198eaf5d719151231f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS09105 225704f77109b0198eaf5d719151231f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS09105 225704f77109b0198eaf5d719151231f 305 SUPERFAMILY SSF46785 9 119 6.75E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09105 225704f77109b0198eaf5d719151231f 305 Gene3D G3DSA:1.10.10.10 9 91 2.7E-26 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09105 225704f77109b0198eaf5d719151231f 305 SUPERFAMILY SSF53850 96 285 1.09E-25 T 06-07-2017 AM402_RS09105 225704f77109b0198eaf5d719151231f 305 Gene3D G3DSA:3.40.190.10 97 196 6.8E-15 T 06-07-2017 AM402_RS09105 225704f77109b0198eaf5d719151231f 305 Pfam PF03466 LysR substrate binding domain 97 282 1.0E-25 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS09105 225704f77109b0198eaf5d719151231f 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 8.0E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS07710 af762a00e306211f9346d7aa28360c04 91 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 1.0E-24 T 06-07-2017 IPR005631 Flavinator of succinate dehydrogenase AM402_RS07710 af762a00e306211f9346d7aa28360c04 91 SUPERFAMILY SSF109910 2 78 8.11E-26 T 06-07-2017 IPR005631 Flavinator of succinate dehydrogenase AM402_RS07710 af762a00e306211f9346d7aa28360c04 91 Gene3D G3DSA:1.10.150.250 4 83 1.6E-29 T 06-07-2017 IPR005631 Flavinator of succinate dehydrogenase AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 Gene3D G3DSA:3.40.190.10 209 256 1.5E-6 T 06-07-2017 AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 Gene3D G3DSA:1.10.10.10 3 87 1.0E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 Gene3D G3DSA:3.40.190.10 106 190 2.9E-6 T 06-07-2017 AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.8E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 SUPERFAMILY SSF53850 106 293 1.99E-17 T 06-07-2017 AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 Pfam PF03466 LysR substrate binding domain 90 291 5.6E-16 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 SUPERFAMILY SSF46785 3 87 9.35E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS06680 6289bad52aa0e3df8f2eddab9c1a218c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS19670 3e0466547c8726b941ea3ffb64a609eb 372 Gene3D G3DSA:3.40.50.300 64 181 9.5E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19670 3e0466547c8726b941ea3ffb64a609eb 372 SUPERFAMILY SSF52540 64 205 7.72E-14 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19670 3e0466547c8726b941ea3ffb64a609eb 372 Pfam PF03969 AFG1-like ATPase 5 367 2.3E-148 T 06-07-2017 IPR005654 ATPase, AFG1-like GO:0005524 AM402_RS19670 3e0466547c8726b941ea3ffb64a609eb 372 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 372 52.332 T 06-07-2017 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AM402_RS10675 1b9b0c9e02a4f9d77032507ab2b13f47 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 06-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM402_RS10675 1b9b0c9e02a4f9d77032507ab2b13f47 182 PIRSF PIRSF000847 1 182 3.1E-45 T 06-07-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 AM402_RS10675 1b9b0c9e02a4f9d77032507ab2b13f47 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 3.5E-17 T 06-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM402_RS10675 1b9b0c9e02a4f9d77032507ab2b13f47 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 2.3E-60 T 06-07-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1363 1443 2.8E-27 T 06-07-2017 IPR022385 Rhs repeat-associated core GO:0097264 AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 PRINTS PR00394 RHS protein signature 1388 1408 8.0E-13 T 06-07-2017 IPR001826 RHS protein AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 PRINTS PR00394 RHS protein signature 1411 1430 8.0E-13 T 06-07-2017 IPR001826 RHS protein AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 PRINTS PR00394 RHS protein signature 1330 1350 8.0E-13 T 06-07-2017 IPR001826 RHS protein AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 Pfam PF05593 RHS Repeat 672 702 2.9E-6 T 06-07-2017 IPR031325 RHS repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 Pfam PF05593 RHS Repeat 732 768 1.3E-4 T 06-07-2017 IPR031325 RHS repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 Pfam PF05593 RHS Repeat 817 850 7.5E-5 T 06-07-2017 IPR031325 RHS repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 Pfam PF05593 RHS Repeat 774 811 2.5E-8 T 06-07-2017 IPR031325 RHS repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 732 772 8.8E-5 T 06-07-2017 IPR006530 YD repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 689 731 2.2E-5 T 06-07-2017 IPR006530 YD repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 879 919 1.1E-7 T 06-07-2017 IPR006530 YD repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 774 815 5.7E-6 T 06-07-2017 IPR006530 YD repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 818 851 2.7E-5 T 06-07-2017 IPR006530 YD repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 647 688 3.5E-5 T 06-07-2017 IPR006530 YD repeat AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 1449 1547 3.5E-19 T 06-07-2017 IPR032871 AHH domain-containing protein AM402_RS15230 29585f139f7f33c1428e187928cb37f4 1566 Pfam PF03527 RHS protein 1336 1372 1.6E-13 T 06-07-2017 IPR001826 RHS protein AM402_RS15385 51721c1d8665881368a5d3dae93c6f66 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 239 3.1E-116 T 06-07-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM402_RS15385 51721c1d8665881368a5d3dae93c6f66 253 SUPERFAMILY SSF53448 1 245 1.82E-62 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS15385 51721c1d8665881368a5d3dae93c6f66 253 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 247 42.7 T 06-07-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM402_RS15385 51721c1d8665881368a5d3dae93c6f66 253 Pfam PF02348 Cytidylyltransferase 4 220 1.4E-64 T 06-07-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AM402_RS15385 51721c1d8665881368a5d3dae93c6f66 253 Gene3D G3DSA:3.90.550.10 2 248 1.0E-79 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS19385 09840541a22b5d1c2b87c2b7a609d24d 261 Pfam PF03883 Protein of unknown function (DUF328) 1 244 2.1E-90 T 06-07-2017 IPR005583 Peroxide stress protein YaaA AM402_RS19385 09840541a22b5d1c2b87c2b7a609d24d 261 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 256 36.382 T 06-07-2017 IPR005583 Peroxide stress protein YaaA AM402_RS19960 a1bfcdcefceec06c39ffb5f2a1cc4e06 138 Pfam PF12568 Acetyltransferase (GNAT) domain 2 128 1.6E-45 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS19960 a1bfcdcefceec06c39ffb5f2a1cc4e06 138 SUPERFAMILY SSF55729 17 123 3.54E-10 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS19960 a1bfcdcefceec06c39ffb5f2a1cc4e06 138 Gene3D G3DSA:3.40.630.30 39 124 9.1E-9 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 SUPERFAMILY SSF56672 3 238 1.78E-72 T 06-07-2017 AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 Pfam PF11798 IMS family HHH motif 170 201 4.4E-6 T 06-07-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 352 2.5E-11 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 Pfam PF00817 impB/mucB/samB family 7 152 5.7E-36 T 06-07-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 Gene3D G3DSA:1.10.150.20 169 241 6.3E-22 T 06-07-2017 AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 Gene3D G3DSA:3.30.1490.100 246 352 2.4E-6 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 Pfam PF13438 Domain of unknown function (DUF4113) 372 421 2.2E-22 T 06-07-2017 IPR025188 Domain of unknown function DUF4113 AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 SUPERFAMILY SSF100879 245 348 1.14E-6 T 06-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM402_RS05245 db4c016077135e7be791ed4fb7c04b72 422 Gene3D G3DSA:3.30.70.270 71 158 6.5E-24 T 06-07-2017 AM402_RS00090 bb7c623cd72003d785380db1ebfee354 320 Pfam PF01261 Xylose isomerase-like TIM barrel 27 217 1.1E-20 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS00090 bb7c623cd72003d785380db1ebfee354 320 Gene3D G3DSA:3.20.20.150 1 240 2.8E-40 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS00090 bb7c623cd72003d785380db1ebfee354 320 SUPERFAMILY SSF51658 18 240 3.04E-32 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS16660 caee8ebe4727064a82e0e33b455a3acd 268 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 06-07-2017 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM402_RS16660 caee8ebe4727064a82e0e33b455a3acd 268 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 6.5E-21 T 06-07-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AM402_RS16660 caee8ebe4727064a82e0e33b455a3acd 268 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.223 T 06-07-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM402_RS16660 caee8ebe4727064a82e0e33b455a3acd 268 Gene3D G3DSA:3.40.50.1360 1 264 4.2E-110 T 06-07-2017 AM402_RS16660 caee8ebe4727064a82e0e33b455a3acd 268 SUPERFAMILY SSF100950 1 263 1.26E-102 T 06-07-2017 AM402_RS16660 caee8ebe4727064a82e0e33b455a3acd 268 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 6.9E-132 T 06-07-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 AM402_RS19120 02c1fe10fa124ca786e547249c365334 157 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 5.2E-21 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS19120 02c1fe10fa124ca786e547249c365334 157 Gene3D G3DSA:2.30.110.20 1 152 3.7E-23 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS19120 02c1fe10fa124ca786e547249c365334 157 SUPERFAMILY SSF141452 2 153 2.88E-33 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS19120 02c1fe10fa124ca786e547249c365334 157 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 1.1E-51 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS02570 23ebf0c1edca571df26db117b04c1ab7 144 Gene3D G3DSA:3.40.50.620 3 140 4.2E-32 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS02570 23ebf0c1edca571df26db117b04c1ab7 144 PIRSF PIRSF006276 1 141 1.6E-53 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS02570 23ebf0c1edca571df26db117b04c1ab7 144 Pfam PF00582 Universal stress protein family 3 138 8.8E-21 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS02570 23ebf0c1edca571df26db117b04c1ab7 144 SUPERFAMILY SSF52402 3 139 9.21E-32 T 06-07-2017 AM402_RS13645 f5824a0bef68465b579fe826398972ac 104 Gene3D G3DSA:1.10.260.40 4 71 2.0E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS13645 f5824a0bef68465b579fe826398972ac 104 Pfam PF12844 Helix-turn-helix domain 11 71 1.1E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS13645 f5824a0bef68465b579fe826398972ac 104 SMART SM00530 11 66 3.7E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS13645 f5824a0bef68465b579fe826398972ac 104 SUPERFAMILY SSF47413 1 68 1.69E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS05310 31a2676aabc059c0e7e06dada01a693f 716 SUPERFAMILY SSF109604 190 252 5.1E-7 T 06-07-2017 AM402_RS05310 31a2676aabc059c0e7e06dada01a693f 716 SUPERFAMILY SSF109604 96 153 5.1E-7 T 06-07-2017 AM402_RS05310 31a2676aabc059c0e7e06dada01a693f 716 Gene3D G3DSA:1.10.3210.10 89 252 6.2E-5 T 06-07-2017 IPR006674 HD domain AM402_RS05310 31a2676aabc059c0e7e06dada01a693f 716 Pfam PF07514 Putative helicase 32 353 3.7E-124 T 06-07-2017 IPR011119 Uncharacterised domain, helicase/relaxase, putative AM402_RS21745 c7ee353e0e66d3c4c2f374ff5b22381b 346 TIGRFAM TIGR02740 TraF-like: TraF-like protein 34 285 2.9E-78 T 06-07-2017 IPR014111 Type IV conjugative transfer system protein TraF AM402_RS21745 c7ee353e0e66d3c4c2f374ff5b22381b 346 Pfam PF13728 F plasmid transfer operon protein 47 276 2.1E-73 T 06-07-2017 AM402_RS09450 be86c73eb97625fce6234423bd2a279d 220 Pfam PF03591 AzlC protein 20 153 1.6E-28 T 06-07-2017 IPR011606 Branched-chain amino acid transport, permease AM402_RS18850 6b0adaf4ca1774febb311a7521387356 625 Pfam PF13624 SurA N-terminal domain 1 166 6.0E-48 T 06-07-2017 AM402_RS18850 6b0adaf4ca1774febb311a7521387356 625 SUPERFAMILY SSF54534 225 357 1.44E-20 T 06-07-2017 AM402_RS18850 6b0adaf4ca1774febb311a7521387356 625 Pfam PF13145 PPIC-type PPIASE domain 249 370 1.7E-21 T 06-07-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM402_RS18850 6b0adaf4ca1774febb311a7521387356 625 Gene3D G3DSA:3.10.50.40 224 381 1.6E-24 T 06-07-2017 AM402_RS18850 6b0adaf4ca1774febb311a7521387356 625 SUPERFAMILY SSF109998 42 169 4.71E-33 T 06-07-2017 IPR027304 Trigger factor/SurA domain AM402_RS18850 6b0adaf4ca1774febb311a7521387356 625 SUPERFAMILY SSF109998 203 246 4.71E-33 T 06-07-2017 IPR027304 Trigger factor/SurA domain AM402_RS00325 e3e884379b219bfaf782bff3c53ae590 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00325 e3e884379b219bfaf782bff3c53ae590 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.598 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00325 e3e884379b219bfaf782bff3c53ae590 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.002 T 06-07-2017 AM402_RS00325 e3e884379b219bfaf782bff3c53ae590 41 SUPERFAMILY SSF57840 1 41 4.97E-14 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00325 e3e884379b219bfaf782bff3c53ae590 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.4E-8 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00325 e3e884379b219bfaf782bff3c53ae590 41 Pfam PF00444 Ribosomal protein L36 1 41 4.5E-18 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS12935 8b58b86a628865de35f5e1f01b3ee38b 270 Gene3D G3DSA:3.40.50.300 1 248 1.5E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12935 8b58b86a628865de35f5e1f01b3ee38b 270 PIRSF PIRSF003092 1 270 7.4E-98 T 06-07-2017 IPR025501 ATP binding protein MinD AM402_RS12935 8b58b86a628865de35f5e1f01b3ee38b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 2.5E-111 T 06-07-2017 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AM402_RS12935 8b58b86a628865de35f5e1f01b3ee38b 270 SUPERFAMILY SSF52540 1 268 7.54E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS12935 8b58b86a628865de35f5e1f01b3ee38b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 6.5E-28 T 06-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM402_RS03600 8a293eade638432d4c5a0261782fb1ed 249 Gene3D G3DSA:1.10.287.460 32 131 4.3E-39 T 06-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM402_RS03600 8a293eade638432d4c5a0261782fb1ed 249 Gene3D G3DSA:3.10.50.40 132 246 2.8E-41 T 06-07-2017 AM402_RS03600 8a293eade638432d4c5a0261782fb1ed 249 SUPERFAMILY SSF54534 39 246 1.47E-57 T 06-07-2017 AM402_RS03600 8a293eade638432d4c5a0261782fb1ed 249 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 243 4.8E-27 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AM402_RS03600 8a293eade638432d4c5a0261782fb1ed 249 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 35 149 2.6E-35 T 06-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM402_RS02690 ee9b5163a3c967983f932bec0bdce703 407 Pfam PF13503 Domain of unknown function (DUF4123) 128 253 9.9E-16 T 06-07-2017 IPR025391 Domain of unknown function DUF4123 AM402_RS04530 c4eeb51dedb57cbfa941397199d0f237 234 Pfam PF08900 Domain of unknown function (DUF1845) 12 233 2.8E-75 T 06-07-2017 IPR014996 Integrating conjugative element protein, PFL4669 AM402_RS04530 c4eeb51dedb57cbfa941397199d0f237 234 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 14 233 1.1E-56 T 06-07-2017 IPR014996 Integrating conjugative element protein, PFL4669 AM402_RS18245 a21a2b4992b047dca2bc0125afce7703 172 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 163 2.7E-70 T 06-07-2017 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 AM402_RS18245 a21a2b4992b047dca2bc0125afce7703 172 SUPERFAMILY SSF50475 11 164 5.67E-45 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS18245 a21a2b4992b047dca2bc0125afce7703 172 Pfam PF01613 Flavin reductase like domain 15 164 1.1E-27 T 06-07-2017 IPR002563 Flavin reductase like domain GO:0010181 AM402_RS18245 a21a2b4992b047dca2bc0125afce7703 172 Gene3D G3DSA:2.30.110.10 11 166 1.3E-46 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS18245 a21a2b4992b047dca2bc0125afce7703 172 SMART SM00903 15 162 1.4E-42 T 06-07-2017 IPR002563 Flavin reductase like domain GO:0010181 AM402_RS20775 51edf7cdc0ac3f61531124bbf12ab022 340 SUPERFAMILY SSF46689 12 86 1.43E-6 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS20775 51edf7cdc0ac3f61531124bbf12ab022 340 SUPERFAMILY SSF53098 118 290 2.5E-15 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS20775 51edf7cdc0ac3f61531124bbf12ab022 340 Pfam PF00665 Integrase core domain 118 243 9.5E-26 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS20775 51edf7cdc0ac3f61531124bbf12ab022 340 Pfam PF02796 Helix-turn-helix domain of resolvase 9 40 1.1E-8 T 06-07-2017 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM402_RS20775 51edf7cdc0ac3f61531124bbf12ab022 340 Gene3D G3DSA:1.10.10.60 9 39 5.4E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS20775 51edf7cdc0ac3f61531124bbf12ab022 340 Gene3D G3DSA:3.30.420.10 118 288 3.8E-11 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 Gene3D G3DSA:3.90.79.10 230 345 2.8E-21 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 277 2.1E-127 T 06-07-2017 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 SMART SM00525 192 212 5.8E-5 T 06-07-2017 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 SUPERFAMILY SSF55811 221 345 1.19E-23 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 Gene3D G3DSA:1.10.340.30 23 123 1.6E-45 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 SUPERFAMILY SSF48150 4 226 2.2E-79 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 06-07-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 SMART SM00478 40 191 2.8E-55 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 Pfam PF00633 Helix-hairpin-helix motif 100 128 8.5E-9 T 06-07-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 Gene3D G3DSA:1.10.1670.10 124 225 2.0E-40 T 06-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 169 4.7E-23 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 Pfam PF14815 NUDIX domain 234 343 1.1E-20 T 06-07-2017 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM402_RS17385 996689ad9e9dde1cce43d7fb2bb1e304 346 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 06-07-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM402_RS06200 77d17c57a071b5fda49c45928ee82e8b 107 Pfam PF04287 tRNA pseudouridine synthase C 8 104 1.4E-34 T 06-07-2017 IPR023376 YqcC-like domain AM402_RS06200 77d17c57a071b5fda49c45928ee82e8b 107 PIRSF PIRSF006257 1 107 3.6E-38 T 06-07-2017 IPR007384 Protein of unknown function UCP006257 AM402_RS06200 77d17c57a071b5fda49c45928ee82e8b 107 Gene3D G3DSA:1.20.1440.40 1 106 9.0E-38 T 06-07-2017 IPR023376 YqcC-like domain AM402_RS06200 77d17c57a071b5fda49c45928ee82e8b 107 SUPERFAMILY SSF158452 1 106 1.02E-37 T 06-07-2017 IPR023376 YqcC-like domain AM402_RS20895 e617a08db7d06e5093fd9cc0fe872306 235 SUPERFAMILY SSF54423 30 78 5.1E-10 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM402_RS20895 e617a08db7d06e5093fd9cc0fe872306 235 Gene3D G3DSA:3.10.450.70 33 80 7.9E-15 T 06-07-2017 IPR009094 Disulphide bond isomerase, DsbC, N-terminal AM402_RS20895 e617a08db7d06e5093fd9cc0fe872306 235 Gene3D G3DSA:3.40.30.10 110 233 4.3E-18 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS20895 e617a08db7d06e5093fd9cc0fe872306 235 SUPERFAMILY SSF52833 99 233 1.26E-15 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS20895 e617a08db7d06e5093fd9cc0fe872306 235 Pfam PF10411 Disulfide bond isomerase protein N-terminus 24 76 2.9E-12 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM402_RS20895 e617a08db7d06e5093fd9cc0fe872306 235 Pfam PF13098 Thioredoxin-like domain 110 218 2.9E-11 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS14165 fa5c2f9d995b8e62fc7bdf7198d3f4c5 127 Pfam PF05866 Endodeoxyribonuclease RusA 9 116 1.3E-19 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS14165 fa5c2f9d995b8e62fc7bdf7198d3f4c5 127 SUPERFAMILY SSF103084 3 117 4.58E-26 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS14165 fa5c2f9d995b8e62fc7bdf7198d3f4c5 127 PIRSF PIRSF001007 1 123 8.4E-42 T 06-07-2017 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 AM402_RS14165 fa5c2f9d995b8e62fc7bdf7198d3f4c5 127 Gene3D G3DSA:3.30.1330.70 3 120 1.1E-34 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS00270 1edc5e2b2e31b446888a91715a797bc1 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.3E-23 T 06-07-2017 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AM402_RS00270 1edc5e2b2e31b446888a91715a797bc1 115 SUPERFAMILY SSF110857 1 114 3.53E-32 T 06-07-2017 IPR013024 Butirosin biosynthesis, BtrG-like AM402_RS00270 1edc5e2b2e31b446888a91715a797bc1 115 Gene3D G3DSA:3.10.490.10 1 114 5.8E-39 T 06-07-2017 IPR013024 Butirosin biosynthesis, BtrG-like AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 Pfam PF13437 HlyD family secretion protein 262 359 1.6E-15 T 06-07-2017 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 SUPERFAMILY SSF111369 90 140 2.22E-5 T 06-07-2017 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 207 419 1.2E-63 T 06-07-2017 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 112 1.1E-40 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 1.1E-40 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 331 354 1.1E-40 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 274 295 1.1E-40 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 384 399 1.1E-40 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 399 419 1.1E-40 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 50 73 1.1E-40 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 Pfam PF13533 Biotin-lipoyl like 89 128 2.1E-7 T 06-07-2017 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 ProSitePatterns PS00543 HlyD family secretion proteins signature. 384 406 - T 06-07-2017 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 Gene3D G3DSA:2.40.50.100 259 293 6.8E-15 T 06-07-2017 AM402_RS17925 0cfb741ca628f4e97cb37ae0a4e3595c 419 Gene3D G3DSA:2.40.50.100 84 114 6.8E-15 T 06-07-2017 AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 SUPERFAMILY SSF52540 230 378 9.55E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 SUPERFAMILY SSF52540 666 691 9.55E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 SUPERFAMILY SSF52540 13 127 9.55E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 SUPERFAMILY SSF52540 433 628 9.55E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 Gene3D G3DSA:3.40.50.300 223 313 1.3E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 Gene3D G3DSA:3.40.50.300 27 141 1.3E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 Gene3D G3DSA:3.40.50.300 499 553 1.8E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 Gene3D G3DSA:3.40.50.300 597 631 1.8E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 Gene3D G3DSA:3.40.50.300 667 695 1.8E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10530 570684dde9dca26a0f1996ec018c89fd 710 Pfam PF00580 UvrD/REP helicase N-terminal domain 30 312 2.6E-17 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AM402_RS06860 73fe557b0840f189306bf1627c1772b4 240 Pfam PF00149 Calcineurin-like phosphoesterase 4 199 2.1E-11 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AM402_RS06860 73fe557b0840f189306bf1627c1772b4 240 Gene3D G3DSA:3.60.21.10 173 204 3.2E-21 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS06860 73fe557b0840f189306bf1627c1772b4 240 Gene3D G3DSA:3.60.21.10 3 125 3.2E-21 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS06860 73fe557b0840f189306bf1627c1772b4 240 SUPERFAMILY SSF56300 151 219 5.97E-31 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS06860 73fe557b0840f189306bf1627c1772b4 240 SUPERFAMILY SSF56300 1 123 5.97E-31 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS06860 73fe557b0840f189306bf1627c1772b4 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 126.404 T 06-07-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM402_RS06860 73fe557b0840f189306bf1627c1772b4 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.1E-104 T 06-07-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM402_RS13665 d3073ecb1e926b2eafefdb6fcf54e5a7 282 SUPERFAMILY SSF51735 2 245 1.6E-59 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS13665 d3073ecb1e926b2eafefdb6fcf54e5a7 282 Gene3D G3DSA:3.40.50.720 2 217 2.2E-42 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS13665 d3073ecb1e926b2eafefdb6fcf54e5a7 282 Pfam PF05368 NmrA-like family 2 220 3.5E-23 T 06-07-2017 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 Gene3D G3DSA:3.20.80.10 140 303 2.9E-38 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 SMART SM00871 141 304 6.3E-4 T 06-07-2017 IPR010499 Bacterial transcription activator, effector binding AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 Gene3D G3DSA:1.10.10.60 19 72 3.7E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 SUPERFAMILY SSF55136 139 303 9.94E-20 T 06-07-2017 IPR011256 Regulatory factor, effector binding domain AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 SMART SM00342 36 119 1.4E-31 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 103 119 8.1E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 103 8.1E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 73 115 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 Pfam PF12833 Helix-turn-helix domain 43 120 8.9E-22 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 SUPERFAMILY SSF46689 72 120 2.28E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 Gene3D G3DSA:1.10.10.60 73 122 9.2E-22 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 Pfam PF14526 Integron-associated effector binding protein 165 303 2.2E-12 T 06-07-2017 IPR029441 Integron-associated effector binding protein AM402_RS12890 04c240e9805dad686de3c431bd75fae0 304 SUPERFAMILY SSF46689 20 70 9.86E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS05005 c056ed1347a26cc5c163443bc33f338f 847 Pfam PF13954 PapC N-terminal domain 29 172 1.4E-35 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS05005 c056ed1347a26cc5c163443bc33f338f 847 SUPERFAMILY SSF141729 28 147 3.53E-24 T 06-07-2017 AM402_RS05005 c056ed1347a26cc5c163443bc33f338f 847 Pfam PF00577 Outer membrane usher protein 191 750 6.2E-167 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS05005 c056ed1347a26cc5c163443bc33f338f 847 Pfam PF13953 PapC C-terminal domain 760 826 2.1E-13 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS14085 cff999d8d85fd507f2999252368de719 156 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 37 151 1.1E-33 T 06-07-2017 IPR006448 Putative phage terminase, small subunit, P27 family AM402_RS14085 cff999d8d85fd507f2999252368de719 156 Pfam PF05119 Phage terminase, small subunit 46 143 2.8E-26 T 06-07-2017 IPR006448 Putative phage terminase, small subunit, P27 family AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 Hamap MF_00740 Phosphopentomutase [deoB]. 1 408 55.726 T 06-07-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 Gene3D G3DSA:3.30.70.1250 115 236 9.6E-54 T 06-07-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 SUPERFAMILY SSF143856 118 236 1.57E-50 T 06-07-2017 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 SUPERFAMILY SSF53649 237 407 7.59E-70 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 SUPERFAMILY SSF53649 1 115 7.59E-70 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 PIRSF PIRSF001491 1 408 1.2E-166 T 06-07-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 406 4.3E-191 T 06-07-2017 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 Pfam PF01676 Metalloenzyme superfamily 2 399 1.1E-43 T 06-07-2017 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 Gene3D G3DSA:3.40.720.10 1 114 3.0E-72 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS05605 6c8885f1a03e523fdf94d4105c42cdde 408 Gene3D G3DSA:3.40.720.10 241 406 3.0E-72 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS19800 9de156a7a0faa660eb360f13fa798756 93 Gene3D G3DSA:3.30.370.10 1 83 4.4E-24 T 06-07-2017 IPR000468 Barstar (barnase inhibitor) AM402_RS19800 9de156a7a0faa660eb360f13fa798756 93 Pfam PF01337 Barstar (barnase inhibitor) 7 77 5.4E-14 T 06-07-2017 IPR000468 Barstar (barnase inhibitor) AM402_RS19800 9de156a7a0faa660eb360f13fa798756 93 SUPERFAMILY SSF52038 1 85 6.93E-24 T 06-07-2017 IPR000468 Barstar (barnase inhibitor) AM402_RS11355 cae76cd3b8927621f3751af91278c064 188 SUPERFAMILY SSF46689 20 76 7.7E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS11355 cae76cd3b8927621f3751af91278c064 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 66 4.0E-5 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS11355 cae76cd3b8927621f3751af91278c064 188 Gene3D G3DSA:1.10.357.10 10 155 3.2E-22 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS17960 52459e90a90b51a83b4b079eff0eafa0 263 Gene3D G3DSA:1.10.10.60 207 253 1.3E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17960 52459e90a90b51a83b4b079eff0eafa0 263 SUPERFAMILY SSF46689 207 254 6.27E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17960 52459e90a90b51a83b4b079eff0eafa0 263 Pfam PF12833 Helix-turn-helix domain 180 252 3.2E-13 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS17960 52459e90a90b51a83b4b079eff0eafa0 263 SMART SM00342 172 254 3.9E-24 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS17960 52459e90a90b51a83b4b079eff0eafa0 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 250 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS04805 236c21c169c64e1ad231445266b66859 691 SUPERFAMILY SSF54523 515 523 9.26E-23 T 06-07-2017 AM402_RS04805 236c21c169c64e1ad231445266b66859 691 SUPERFAMILY SSF54523 602 691 9.26E-23 T 06-07-2017 AM402_RS04805 236c21c169c64e1ad231445266b66859 691 Pfam PF05658 Head domain of trimeric autotransporter adhesin 475 498 6.0E-5 T 06-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM402_RS04805 236c21c169c64e1ad231445266b66859 691 Gene3D G3DSA:2.150.10.10 432 526 2.6E-34 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS04805 236c21c169c64e1ad231445266b66859 691 Gene3D G3DSA:2.150.10.10 17 67 2.6E-34 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS04805 236c21c169c64e1ad231445266b66859 691 Pfam PF03895 YadA-like C-terminal region 615 691 4.1E-16 T 06-07-2017 IPR005594 YadA-like, C-terminal AM402_RS04805 236c21c169c64e1ad231445266b66859 691 Gene3D G3DSA:3.30.1300.30 602 691 4.0E-23 T 06-07-2017 AM402_RS04805 236c21c169c64e1ad231445266b66859 691 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 506 523 2.7E-6 T 06-07-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM402_RS04805 236c21c169c64e1ad231445266b66859 691 SUPERFAMILY SSF101967 444 525 3.79E-19 T 06-07-2017 AM402_RS03835 6f30817abc349f63ea064b5c96934d99 278 SUPERFAMILY SSF55781 98 274 1.63E-47 T 06-07-2017 IPR029016 GAF domain-like AM402_RS03835 6f30817abc349f63ea064b5c96934d99 278 Gene3D G3DSA:1.10.10.10 15 88 4.1E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS03835 6f30817abc349f63ea064b5c96934d99 278 SUPERFAMILY SSF46785 27 99 1.55E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS03835 6f30817abc349f63ea064b5c96934d99 278 Pfam PF09339 IclR helix-turn-helix domain 29 79 4.3E-18 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM402_RS03835 6f30817abc349f63ea064b5c96934d99 278 Pfam PF01614 Bacterial transcriptional regulator 148 271 3.7E-38 T 06-07-2017 IPR014757 Transcription regulator IclR, C-terminal AM402_RS03835 6f30817abc349f63ea064b5c96934d99 278 Gene3D G3DSA:3.30.450.40 95 275 9.7E-55 T 06-07-2017 IPR029016 GAF domain-like AM402_RS03835 6f30817abc349f63ea064b5c96934d99 278 SMART SM00346 27 117 9.3E-32 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM402_RS13065 2490c5f7dd2f01d449178f23033eacc8 249 PIRSF PIRSF006325 6 248 3.9E-126 T 06-07-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM402_RS13065 2490c5f7dd2f01d449178f23033eacc8 249 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 8 247 42.472 T 06-07-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM402_RS13065 2490c5f7dd2f01d449178f23033eacc8 249 Gene3D G3DSA:3.40.50.150 24 247 1.3E-63 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS13065 2490c5f7dd2f01d449178f23033eacc8 249 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 9 247 1.2E-122 T 06-07-2017 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM402_RS13065 2490c5f7dd2f01d449178f23033eacc8 249 Pfam PF13649 Methyltransferase domain 65 163 1.6E-13 T 06-07-2017 AM402_RS13065 2490c5f7dd2f01d449178f23033eacc8 249 SUPERFAMILY SSF53335 24 247 9.97E-40 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS03455 b4adc46e9cdcb6330d394a90034f7a47 172 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 1.6E-48 T 06-07-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AM402_RS03455 b4adc46e9cdcb6330d394a90034f7a47 172 Gene3D G3DSA:3.40.50.300 5 168 2.5E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03455 b4adc46e9cdcb6330d394a90034f7a47 172 SUPERFAMILY SSF52540 7 168 2.85E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03455 b4adc46e9cdcb6330d394a90034f7a47 172 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 1.3E-49 T 06-07-2017 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AM402_RS11760 697e9c0531a4188b8880e2a5af3fb3af 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 3.2E-18 T 06-07-2017 IPR010710 Protein of unknown function DUF1289 AM402_RS03700 a990ac079016ab1407d6ae6013194a71 259 Hamap MF_00443 Thiazole synthase [thiG]. 1 257 42.492 T 06-07-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM402_RS03700 a990ac079016ab1407d6ae6013194a71 259 SUPERFAMILY SSF110399 1 235 4.19E-85 T 06-07-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM402_RS03700 a990ac079016ab1407d6ae6013194a71 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 251 1.1E-106 T 06-07-2017 AM402_RS03700 a990ac079016ab1407d6ae6013194a71 259 Gene3D G3DSA:3.20.20.70 1 255 8.4E-63 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS14735 44609c2215147969ba92ff1223dbd3f1 153 Pfam PF03245 Bacteriophage Rz lysis protein 31 151 2.8E-22 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 AM402_RS11555 44609c2215147969ba92ff1223dbd3f1 153 Pfam PF03245 Bacteriophage Rz lysis protein 31 151 2.8E-22 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 AM402_RS21260 40ee4b1c01eb8256b50dae857e674e58 192 Gene3D G3DSA:2.10.109.10 54 114 1.3E-7 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS21260 40ee4b1c01eb8256b50dae857e674e58 192 Gene3D G3DSA:2.10.109.10 152 188 1.3E-7 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS21260 40ee4b1c01eb8256b50dae857e674e58 192 SUPERFAMILY SSF51306 49 189 3.92E-15 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS21260 40ee4b1c01eb8256b50dae857e674e58 192 Pfam PF10502 Signal peptidase, peptidase S26 48 189 7.3E-24 T 06-07-2017 IPR019533 Peptidase S26 AM402_RS16050 88bdfad4252dd9ccd97b3da5ae82f0b5 519 Pfam PF08479 POTRA domain, ShlB-type 39 114 3.8E-21 T 06-07-2017 IPR013686 Polypeptide-transport-associated, ShlB-type AM402_RS16050 88bdfad4252dd9ccd97b3da5ae82f0b5 519 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 131 447 6.5E-30 T 06-07-2017 IPR005565 Haemolysin activator HlyB AM402_RS16050 88bdfad4252dd9ccd97b3da5ae82f0b5 519 Gene3D G3DSA:2.40.160.50 143 517 1.5E-77 T 06-07-2017 AM402_RS16050 88bdfad4252dd9ccd97b3da5ae82f0b5 519 PIRSF PIRSF029745 24 519 2.8E-101 T 06-07-2017 IPR027282 Two partner secretion pathway transporter GO:0015031 AM402_RS16050 88bdfad4252dd9ccd97b3da5ae82f0b5 519 Gene3D G3DSA:3.10.20.310 37 114 6.8E-23 T 06-07-2017 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 06-07-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 SUPERFAMILY SSF56300 27 363 4.01E-99 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 06-07-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 SUPERFAMILY SSF55816 365 542 6.28E-47 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 Gene3D G3DSA:3.90.780.10 366 542 5.0E-49 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 Gene3D G3DSA:3.60.21.10 28 363 6.1E-102 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 511 5.4E-30 T 06-07-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 5.2E-19 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 PRINTS PR01607 Apyrase family signature 285 305 7.3E-57 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 PRINTS PR01607 Apyrase family signature 419 442 7.3E-57 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 PRINTS PR01607 Apyrase family signature 487 506 7.3E-57 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 PRINTS PR01607 Apyrase family signature 238 261 7.3E-57 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 PRINTS PR01607 Apyrase family signature 32 50 7.3E-57 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS06775 a8ca0e61b0eea1107ff824bcb85afa42 554 PRINTS PR01607 Apyrase family signature 207 224 7.3E-57 T 06-07-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 AM402_RS19035 e865e67d3b4a4fce418abfa1588d55e6 149 Pfam PF03477 ATP cone domain 50 136 2.4E-17 T 06-07-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM402_RS19035 e865e67d3b4a4fce418abfa1588d55e6 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.4E-76 T 06-07-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM402_RS19035 e865e67d3b4a4fce418abfa1588d55e6 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.948 T 06-07-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM402_RS14455 6f918665d41c473a6389a4ee230b6c1c 476 PIRSF PIRSF000977 2 476 1.9E-201 T 06-07-2017 IPR023607 Exodeoxyribonuclease I GO:0004529 AM402_RS14455 6f918665d41c473a6389a4ee230b6c1c 476 Pfam PF00929 Exonuclease 12 191 6.3E-28 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS14455 6f918665d41c473a6389a4ee230b6c1c 476 Pfam PF08411 Exonuclease C-terminal 211 472 2.0E-106 T 06-07-2017 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 AM402_RS14455 6f918665d41c473a6389a4ee230b6c1c 476 SUPERFAMILY SSF53098 9 474 3.24E-136 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS14455 6f918665d41c473a6389a4ee230b6c1c 476 SMART SM00479 9 202 0.0033 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS14455 6f918665d41c473a6389a4ee230b6c1c 476 Gene3D G3DSA:3.30.420.10 4 199 1.4E-84 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS11825 2b4ed37445395bab7ad6c038ae5d2605 563 PIRSF PIRSF002741 2 549 1.1E-95 T 06-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM402_RS11825 2b4ed37445395bab7ad6c038ae5d2605 563 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 465 2.1E-89 T 06-07-2017 IPR000914 Solute-binding protein family 5 domain AM402_RS11825 2b4ed37445395bab7ad6c038ae5d2605 563 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 92 114 - T 06-07-2017 IPR023765 Solute-binding protein family 5, conserved site AM402_RS11825 2b4ed37445395bab7ad6c038ae5d2605 563 SUPERFAMILY SSF53850 44 545 3.08E-137 T 06-07-2017 AM402_RS11825 2b4ed37445395bab7ad6c038ae5d2605 563 Gene3D G3DSA:3.40.190.10 163 316 1.4E-42 T 06-07-2017 AM402_RS11825 2b4ed37445395bab7ad6c038ae5d2605 563 Gene3D G3DSA:3.10.105.10 317 517 1.9E-58 T 06-07-2017 AM402_RS15885 f53b34c2e8149b83397075c70ce1a105 232 Gene3D G3DSA:1.10.10.60 6 55 5.4E-19 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS15885 f53b34c2e8149b83397075c70ce1a105 232 Gene3D G3DSA:1.10.357.10 56 224 9.6E-56 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS15885 f53b34c2e8149b83397075c70ce1a105 232 SUPERFAMILY SSF48498 102 223 1.53E-27 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS15885 f53b34c2e8149b83397075c70ce1a105 232 Pfam PF09209 Domain of unknown function (DUF1956) 103 222 1.7E-27 T 06-07-2017 IPR015292 Transcription regulator YbiH, C-terminal AM402_RS15885 f53b34c2e8149b83397075c70ce1a105 232 SUPERFAMILY SSF46689 7 88 1.33E-17 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS15885 f53b34c2e8149b83397075c70ce1a105 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 7.9E-13 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS04275 03f906885498889274e7b21e5a06acc1 308 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 62 197 1.3E-17 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS04275 03f906885498889274e7b21e5a06acc1 308 Gene3D G3DSA:1.10.287.950 18 195 2.2E-24 T 06-07-2017 AM402_RS04275 03f906885498889274e7b21e5a06acc1 308 SUPERFAMILY SSF58104 16 197 2.75E-24 T 06-07-2017 AM402_RS04275 03f906885498889274e7b21e5a06acc1 308 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 91 118 8.2E-8 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS04275 03f906885498889274e7b21e5a06acc1 308 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 120 149 8.2E-8 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS04275 03f906885498889274e7b21e5a06acc1 308 Pfam PF13682 Chemoreceptor zinc-binding domain 210 273 1.1E-14 T 06-07-2017 IPR025991 Chemoreceptor zinc-binding domain AM402_RS04495 e846a8fa49040f2cf19ae7de46be3d82 549 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 29 292 2.3E-103 T 06-07-2017 IPR022304 Integrating conjugative element, PFGI-1, ParB AM402_RS04495 e846a8fa49040f2cf19ae7de46be3d82 549 Gene3D G3DSA:3.90.1530.10 39 103 4.5E-6 T 06-07-2017 AM402_RS04495 e846a8fa49040f2cf19ae7de46be3d82 549 SUPERFAMILY SSF110849 37 138 3.4E-8 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 TIGRFAM TIGR00235 udk: uridine kinase 6 211 1.6E-92 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 5.0E-45 T 06-07-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 Gene3D G3DSA:3.40.50.300 5 205 1.5E-69 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 39.634 T 06-07-2017 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 SUPERFAMILY SSF52540 8 205 3.84E-50 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 PRINTS PR00988 Uridine kinase signature 8 25 3.2E-37 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 PRINTS PR00988 Uridine kinase signature 42 53 3.2E-37 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 PRINTS PR00988 Uridine kinase signature 157 168 3.2E-37 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 PRINTS PR00988 Uridine kinase signature 143 153 3.2E-37 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 PRINTS PR00988 Uridine kinase signature 87 102 3.2E-37 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM402_RS15735 dbd5fd9ed921762962a1ef8e48f03889 213 PRINTS PR00988 Uridine kinase signature 179 192 3.2E-37 T 06-07-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AM402_RS17675 00d85bdaf569147a2d202c6361e191ec 155 Pfam PF12101 Protein of unknown function (DUF3577) 8 137 3.8E-55 T 06-07-2017 IPR021960 Protein of unknown function DUF3577 AM402_RS00430 5000da7ecb2ab5402c05141d420f633c 108 SUPERFAMILY SSF143011 3 97 2.59E-6 T 06-07-2017 AM402_RS00430 5000da7ecb2ab5402c05141d420f633c 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 97 2.8E-14 T 06-07-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM402_RS09590 48049e284e75e44acb1ba5b801db40d0 232 Pfam PF02308 MgtC family 10 129 3.8E-39 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS09590 48049e284e75e44acb1ba5b801db40d0 232 PRINTS PR01837 MgtC/SapB protein signature 13 32 4.3E-47 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS09590 48049e284e75e44acb1ba5b801db40d0 232 PRINTS PR01837 MgtC/SapB protein signature 32 50 4.3E-47 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS09590 48049e284e75e44acb1ba5b801db40d0 232 PRINTS PR01837 MgtC/SapB protein signature 57 79 4.3E-47 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS09590 48049e284e75e44acb1ba5b801db40d0 232 PRINTS PR01837 MgtC/SapB protein signature 84 108 4.3E-47 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS18175 fe3e3a2e8cdd8675126542f31c2d7832 106 SMART SM00530 18 73 3.2E-16 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS18175 fe3e3a2e8cdd8675126542f31c2d7832 106 Pfam PF01381 Helix-turn-helix 19 73 1.0E-14 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS18175 fe3e3a2e8cdd8675126542f31c2d7832 106 SUPERFAMILY SSF47413 7 79 8.85E-22 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18175 fe3e3a2e8cdd8675126542f31c2d7832 106 Gene3D G3DSA:1.10.260.40 15 76 1.5E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS01725 9a96e60d8f47b4ecd21b3011d905513a 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 322 2.7E-50 T 06-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM402_RS01725 9a96e60d8f47b4ecd21b3011d905513a 355 SUPERFAMILY SSF53756 10 354 2.67E-85 T 06-07-2017 AM402_RS01725 9a96e60d8f47b4ecd21b3011d905513a 355 Gene3D G3DSA:3.40.50.2000 9 164 4.4E-44 T 06-07-2017 AM402_RS01725 9a96e60d8f47b4ecd21b3011d905513a 355 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 10 355 3.9E-139 T 06-07-2017 IPR011916 Lipopolysaccharide heptosyltransferase III, putative AM402_RS01725 9a96e60d8f47b4ecd21b3011d905513a 355 Gene3D G3DSA:3.40.50.2000 177 354 1.6E-49 T 06-07-2017 AM402_RS01950 6ccf360056262cbc5ae90a17a6ceeaed 267 SUPERFAMILY SSF74653 173 267 2.49E-20 T 06-07-2017 AM402_RS01950 6ccf360056262cbc5ae90a17a6ceeaed 267 Gene3D G3DSA:3.30.1150.10 165 267 4.2E-23 T 06-07-2017 AM402_RS01950 6ccf360056262cbc5ae90a17a6ceeaed 267 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 192 267 9.4E-18 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS01950 6ccf360056262cbc5ae90a17a6ceeaed 267 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 191 263 9.9E-15 T 06-07-2017 IPR006260 TonB, C-terminal GO:0006810 AM402_RS07195 d67844dda4297e3f2b2d1fc38c694edf 251 Pfam PF05658 Head domain of trimeric autotransporter adhesin 63 87 1.3E-4 T 06-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AM402_RS07195 d67844dda4297e3f2b2d1fc38c694edf 251 SUPERFAMILY SSF54523 162 251 3.77E-13 T 06-07-2017 AM402_RS07195 d67844dda4297e3f2b2d1fc38c694edf 251 SUPERFAMILY SSF54523 106 114 3.77E-13 T 06-07-2017 AM402_RS07195 d67844dda4297e3f2b2d1fc38c694edf 251 Gene3D G3DSA:3.30.1300.30 162 251 4.2E-16 T 06-07-2017 AM402_RS07195 d67844dda4297e3f2b2d1fc38c694edf 251 Gene3D G3DSA:2.150.10.10 40 117 6.0E-18 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS07195 d67844dda4297e3f2b2d1fc38c694edf 251 Pfam PF03895 YadA-like C-terminal region 175 251 2.6E-11 T 06-07-2017 IPR005594 YadA-like, C-terminal AM402_RS07195 d67844dda4297e3f2b2d1fc38c694edf 251 SUPERFAMILY SSF101967 41 117 2.35E-13 T 06-07-2017 AM402_RS11905 f66b13d201f32da6e43aa1870babfa1f 222 PIRSF PIRSF006324 14 222 4.6E-52 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS11905 f66b13d201f32da6e43aa1870babfa1f 222 Pfam PF01810 LysE type translocator 29 219 1.6E-46 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS15990 5eef4cb08d3f5e59c226920bdaf1a683 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 222 9.0E-24 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS15990 5eef4cb08d3f5e59c226920bdaf1a683 230 Gene3D G3DSA:1.10.3720.10 7 225 1.1E-46 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS15990 5eef4cb08d3f5e59c226920bdaf1a683 230 SUPERFAMILY SSF161098 5 219 1.28E-52 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS15990 5eef4cb08d3f5e59c226920bdaf1a683 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 220 9.5E-77 T 06-07-2017 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AM402_RS04405 ea6c366d935e675f9a1b4043edc1812a 413 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 44 400 2.5E-81 T 06-07-2017 IPR010327 FldB/FldC dehydratase alpha/beta subunit AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 SMART SM00382 31 236 2.6E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 SMART SM00382 348 522 1.2E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 Pfam PF12848 ABC transporter 230 306 9.4E-13 T 06-07-2017 IPR032781 ABC-transporter extension domain AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 7.5E-296 T 06-07-2017 IPR022374 ABC transporter, ATP-binding protein, ChvD AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 SUPERFAMILY SSF52540 16 243 1.17E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 Gene3D G3DSA:3.40.50.300 322 535 1.5E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 Pfam PF00005 ABC transporter 22 191 3.7E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 Pfam PF00005 ABC transporter 340 473 9.5E-24 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 SUPERFAMILY SSF52540 304 526 1.4E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 Gene3D G3DSA:3.40.50.300 141 285 2.1E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19445 a41d424c33b43bc83d070622740b6eda 555 Gene3D G3DSA:3.40.50.300 15 106 2.1E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16270 aab5e136d6a2ebdc327b8d703a41785e 183 SUPERFAMILY SSF47598 1 35 1.4E-13 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AM402_RS16270 aab5e136d6a2ebdc327b8d703a41785e 183 PIRSF PIRSF019401 1 183 3.2E-51 T 06-07-2017 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 AM402_RS16270 aab5e136d6a2ebdc327b8d703a41785e 183 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 183 40.448 T 06-07-2017 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 AM402_RS16270 aab5e136d6a2ebdc327b8d703a41785e 183 Gene3D G3DSA:1.10.1220.10 1 40 2.0E-25 T 06-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM402_RS16270 aab5e136d6a2ebdc327b8d703a41785e 183 SUPERFAMILY SSF82808 68 183 2.22E-45 T 06-07-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM402_RS16270 aab5e136d6a2ebdc327b8d703a41785e 183 Pfam PF03925 SeqA protein C-terminal domain 73 181 3.3E-47 T 06-07-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM402_RS16270 aab5e136d6a2ebdc327b8d703a41785e 183 Gene3D G3DSA:1.20.1380.10 70 183 1.7E-49 T 06-07-2017 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AM402_RS06185 5e933b0e3fe9dc61ef7f867e71295587 455 Pfam PF03641 Possible lysine decarboxylase 190 329 4.0E-33 T 06-07-2017 IPR031100 LOG family AM402_RS06185 5e933b0e3fe9dc61ef7f867e71295587 455 Gene3D G3DSA:3.40.50.450 125 453 3.5E-122 T 06-07-2017 AM402_RS06185 5e933b0e3fe9dc61ef7f867e71295587 455 SUPERFAMILY SSF102405 121 330 1.34E-41 T 06-07-2017 AM402_RS06185 5e933b0e3fe9dc61ef7f867e71295587 455 Pfam PF11892 Domain of unknown function (DUF3412) 333 454 3.8E-55 T 06-07-2017 IPR021826 Protein of unknown function DUF3412 AM402_RS06185 5e933b0e3fe9dc61ef7f867e71295587 455 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 9.2E-47 T 06-07-2017 IPR027820 Domain of unknown function DUF4478 AM402_RS06185 5e933b0e3fe9dc61ef7f867e71295587 455 Gene3D G3DSA:3.30.1850.10 2 112 2.8E-54 T 06-07-2017 IPR027820 Domain of unknown function DUF4478 AM402_RS15330 8089d9cb9b5acbe313f2468fa85cad3d 157 Gene3D G3DSA:2.30.110.20 1 152 5.1E-24 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS15330 8089d9cb9b5acbe313f2468fa85cad3d 157 Pfam PF05638 Type VI secretion system effector, Hcp 18 143 6.3E-25 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS15330 8089d9cb9b5acbe313f2468fa85cad3d 157 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 1.8E-60 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS15330 8089d9cb9b5acbe313f2468fa85cad3d 157 SUPERFAMILY SSF141452 2 155 1.07E-36 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS11405 58f3b62e80cb78c9ef2346143d119211 267 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 4 242 1.6E-102 T 06-07-2017 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 AM402_RS11405 58f3b62e80cb78c9ef2346143d119211 267 Pfam PF03837 RecT family 53 248 5.8E-55 T 06-07-2017 IPR018330 RecT family GO:0003677|GO:0006259 AM402_RS08435 52de700f5b7469d19b05d559062001e4 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 25.339 T 06-07-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM402_RS08435 52de700f5b7469d19b05d559062001e4 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 1.5E-34 T 06-07-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM402_RS08435 52de700f5b7469d19b05d559062001e4 126 SUPERFAMILY SSF56214 3 125 3.4E-29 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS08435 52de700f5b7469d19b05d559062001e4 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 1.0E-23 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS08435 52de700f5b7469d19b05d559062001e4 126 Gene3D G3DSA:3.90.470.20 1 125 3.6E-40 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS08435 52de700f5b7469d19b05d559062001e4 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 27 126 3.0E-27 T 06-07-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM402_RS08435 52de700f5b7469d19b05d559062001e4 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 4.7E-50 T 06-07-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 Gene3D G3DSA:3.30.230.40 167 253 7.4E-38 T 06-07-2017 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 06-07-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 06-07-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.149 T 06-07-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 Gene3D G3DSA:3.40.50.1000 1 160 2.9E-41 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 Gene3D G3DSA:3.30.230.40 257 355 1.6E-31 T 06-07-2017 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 SUPERFAMILY SSF56784 1 150 7.62E-37 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 Pfam PF08645 Polynucleotide kinase 3 phosphatase 4 130 1.0E-5 T 06-07-2017 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 SUPERFAMILY SSF54211 167 251 7.71E-32 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 144 1.4E-46 T 06-07-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 145 2.9E-25 T 06-07-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 54.76 T 06-07-2017 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 4.4E-64 T 06-07-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 SUPERFAMILY SSF54211 252 342 3.29E-31 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS15675 da871e7cf9a4aedab4fed0f34dfd6309 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 2.1E-78 T 06-07-2017 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AM402_RS16890 d09e56a9d14625af6d31be8abc8aaaf4 74 SUPERFAMILY SSF52833 1 72 2.97E-17 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS16890 d09e56a9d14625af6d31be8abc8aaaf4 74 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 8.5E-28 T 06-07-2017 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 AM402_RS16890 d09e56a9d14625af6d31be8abc8aaaf4 74 Gene3D G3DSA:3.40.30.10 1 73 3.9E-25 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS16890 d09e56a9d14625af6d31be8abc8aaaf4 74 Pfam PF00462 Glutaredoxin 3 61 1.9E-13 T 06-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 SUPERFAMILY SSF49354 50 184 6.28E-24 T 06-07-2017 IPR008962 PapD-like AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 PRINTS PR00969 Pili chaperone signature 105 126 6.5E-10 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 PRINTS PR00969 Pili chaperone signature 166 181 6.5E-10 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 PRINTS PR00969 Pili chaperone signature 202 217 6.5E-10 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 SUPERFAMILY SSF49584 179 260 3.14E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 207 257 1.0E-6 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 Gene3D G3DSA:2.60.40.360 56 182 2.5E-25 T 06-07-2017 IPR008962 PapD-like AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 58 184 3.7E-21 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS05000 c080733b54109b694116255e1ff7ec51 271 Gene3D G3DSA:2.60.40.1070 191 258 1.3E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS06410 5f0e1a4f5dad15dceaa8266c2649974d 261 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 50 253 1.4E-9 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS06410 5f0e1a4f5dad15dceaa8266c2649974d 261 Gene3D G3DSA:3.60.10.10 42 197 1.6E-9 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS06410 5f0e1a4f5dad15dceaa8266c2649974d 261 SUPERFAMILY SSF56219 45 261 2.09E-25 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS16045 dd0a745f6ff04a9e74f159147eac9550 1802 SUPERFAMILY SSF51126 41 316 2.39E-62 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS16045 dd0a745f6ff04a9e74f159147eac9550 1802 Pfam PF05860 haemagglutination activity domain 39 163 2.2E-31 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS16045 dd0a745f6ff04a9e74f159147eac9550 1802 Pfam PF04830 Possible hemagglutinin (DUF637) 1242 1411 5.2E-50 T 06-07-2017 IPR006915 Domain of unknown function DUF637, haemagglutinin putative AM402_RS16045 dd0a745f6ff04a9e74f159147eac9550 1802 SMART SM00912 46 166 2.9E-40 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS16045 dd0a745f6ff04a9e74f159147eac9550 1802 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 64 161 2.2E-20 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS16045 dd0a745f6ff04a9e74f159147eac9550 1802 Gene3D G3DSA:2.160.20.10 36 325 2.0E-89 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 Gene3D G3DSA:3.40.50.300 20 190 8.3E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 SUPERFAMILY SSF52540 22 188 6.36E-34 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 Pfam PF01202 Shikimate kinase 31 188 2.3E-55 T 06-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 PRINTS PR01100 Shikimate kinase family signature 95 104 7.5E-29 T 06-07-2017 AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 PRINTS PR01100 Shikimate kinase family signature 116 133 7.5E-29 T 06-07-2017 AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 PRINTS PR01100 Shikimate kinase family signature 25 40 7.5E-29 T 06-07-2017 AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 PRINTS PR01100 Shikimate kinase family signature 77 85 7.5E-29 T 06-07-2017 AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 PRINTS PR01100 Shikimate kinase family signature 49 62 7.5E-29 T 06-07-2017 AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 Hamap MF_00109 Shikimate kinase [aroK]. 22 189 29.109 T 06-07-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM402_RS02485 64ff81cab9f95275965129162f43f78e 191 ProSitePatterns PS01128 Shikimate kinase signature. 78 103 - T 06-07-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM402_RS03350 b5e32ede50f1fda27ca0b52fabc3469e 427 Gene3D G3DSA:3.40.640.10 68 277 9.8E-41 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS03350 b5e32ede50f1fda27ca0b52fabc3469e 427 SUPERFAMILY SSF53383 31 422 6.05E-60 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS03350 b5e32ede50f1fda27ca0b52fabc3469e 427 Gene3D G3DSA:3.90.1150.10 278 420 1.2E-18 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS03350 b5e32ede50f1fda27ca0b52fabc3469e 427 Pfam PF00155 Aminotransferase class I and II 178 384 5.1E-22 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 145 5.3E-67 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 Gene3D G3DSA:3.10.420.10 2 151 3.7E-65 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 SUPERFAMILY SSF54611 2 141 3.92E-54 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.691 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 2.5E-41 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 2.5E-41 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 2.5E-41 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 2.5E-41 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS01655 4397d45fab340df645fa3de5e5e9aa1b 157 Pfam PF02556 Preprotein translocase subunit SecB 4 144 7.6E-59 T 06-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM402_RS07340 f2dae1647b12781cbc7711537c112ab6 113 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 12 104 4.8E-31 T 06-07-2017 IPR014056 Addiction module killer protein, predicted AM402_RS07340 f2dae1647b12781cbc7711537c112ab6 113 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 28 98 2.1E-5 T 06-07-2017 IPR009241 Toxin HigB-like AM402_RS07340 f2dae1647b12781cbc7711537c112ab6 113 PIRSF PIRSF028744 2 110 5.0E-33 T 06-07-2017 IPR014056 Addiction module killer protein, predicted AM402_RS13130 d2b5ce83b0871cd33a9652b29c192e0b 202 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 99 189 9.7E-23 T 06-07-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM402_RS13130 d2b5ce83b0871cd33a9652b29c192e0b 202 Gene3D G3DSA:2.60.120.620 139 185 8.0E-4 T 06-07-2017 AM402_RS13130 d2b5ce83b0871cd33a9652b29c192e0b 202 SMART SM00702 13 189 1.1E-37 T 06-07-2017 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AM402_RS20965 0c403a1eae4a8602e3fdc4dfc391ce29 621 Pfam PF12696 TraM recognition site of TraD and TraG 471 598 1.0E-12 T 06-07-2017 IPR032689 TraD/TraG, TraM recognition site AM402_RS20965 0c403a1eae4a8602e3fdc4dfc391ce29 621 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 10 619 2.4E-225 T 06-07-2017 IPR022458 Conjugative coupling factor TraG/TraD AM402_RS20965 0c403a1eae4a8602e3fdc4dfc391ce29 621 SUPERFAMILY SSF52540 146 326 1.67E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20965 0c403a1eae4a8602e3fdc4dfc391ce29 621 SUPERFAMILY SSF52540 373 611 1.67E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20965 0c403a1eae4a8602e3fdc4dfc391ce29 621 Gene3D G3DSA:3.40.50.300 419 620 2.4E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20965 0c403a1eae4a8602e3fdc4dfc391ce29 621 Gene3D G3DSA:3.40.50.300 141 245 2.4E-49 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20965 0c403a1eae4a8602e3fdc4dfc391ce29 621 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 170 297 1.6E-8 T 06-07-2017 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AM402_RS02025 73944e525063f8c357172664ae134cd3 620 Pfam PF00009 Elongation factor Tu GTP binding domain 3 164 4.0E-29 T 06-07-2017 AM402_RS02025 73944e525063f8c357172664ae134cd3 620 Gene3D G3DSA:1.10.10.10 425 489 6.0E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02025 73944e525063f8c357172664ae134cd3 620 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 616 9.9E-200 T 06-07-2017 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM402_RS02025 73944e525063f8c357172664ae134cd3 620 SUPERFAMILY SSF50447 178 297 3.53E-22 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS02025 73944e525063f8c357172664ae134cd3 620 Gene3D G3DSA:2.40.30.10 176 298 2.0E-27 T 06-07-2017 AM402_RS02025 73944e525063f8c357172664ae134cd3 620 SUPERFAMILY SSF50465 277 357 1.19E-8 T 06-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM402_RS02025 73944e525063f8c357172664ae134cd3 620 Pfam PF09106 Elongation factor SelB, winged helix 432 488 2.8E-17 T 06-07-2017 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM402_RS02025 73944e525063f8c357172664ae134cd3 620 SUPERFAMILY SSF46785 563 616 2.53E-13 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02025 73944e525063f8c357172664ae134cd3 620 Gene3D G3DSA:1.10.10.10 558 616 1.4E-23 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02025 73944e525063f8c357172664ae134cd3 620 SUPERFAMILY SSF46785 426 491 2.2E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02025 73944e525063f8c357172664ae134cd3 620 SUPERFAMILY SSF52540 2 192 3.73E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02025 73944e525063f8c357172664ae134cd3 620 Pfam PF09107 Elongation factor SelB, winged helix 571 614 5.4E-19 T 06-07-2017 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM402_RS02025 73944e525063f8c357172664ae134cd3 620 Gene3D G3DSA:3.40.50.300 3 166 1.5E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06865 d0585c60dc217419e178c809678b2869 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 06-07-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM402_RS06865 d0585c60dc217419e178c809678b2869 164 SUPERFAMILY SSF50891 1 162 3.94E-59 T 06-07-2017 IPR029000 Cyclophilin-like domain AM402_RS06865 d0585c60dc217419e178c809678b2869 164 PIRSF PIRSF001467 1 164 2.0E-28 T 06-07-2017 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AM402_RS06865 d0585c60dc217419e178c809678b2869 164 Gene3D G3DSA:2.40.100.10 2 162 4.3E-56 T 06-07-2017 IPR029000 Cyclophilin-like domain AM402_RS06865 d0585c60dc217419e178c809678b2869 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 2.6E-48 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM402_RS06865 d0585c60dc217419e178c809678b2869 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 3.8E-12 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM402_RS06865 d0585c60dc217419e178c809678b2869 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 3.8E-12 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM402_RS06865 d0585c60dc217419e178c809678b2869 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 3.8E-12 T 06-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM402_RS10095 585f01ab6a904bba5a85e696fb8f0216 457 SUPERFAMILY SSF103473 1 432 7.19E-56 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS10095 585f01ab6a904bba5a85e696fb8f0216 457 Gene3D G3DSA:1.20.1250.20 25 229 3.1E-22 T 06-07-2017 AM402_RS10095 585f01ab6a904bba5a85e696fb8f0216 457 Gene3D G3DSA:1.20.1250.20 257 431 3.4E-8 T 06-07-2017 AM402_RS10095 585f01ab6a904bba5a85e696fb8f0216 457 Pfam PF07690 Major Facilitator Superfamily 71 333 4.2E-22 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS19020 9eaa4eb3e6e59d8245480f531fd856c0 137 SUPERFAMILY SSF48013 3 135 1.96E-43 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM402_RS19020 9eaa4eb3e6e59d8245480f531fd856c0 137 Gene3D G3DSA:1.10.940.10 3 135 2.5E-46 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM402_RS19020 9eaa4eb3e6e59d8245480f531fd856c0 137 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 5.9E-46 T 06-07-2017 IPR011605 NusB antitermination factor GO:0006353 AM402_RS19020 9eaa4eb3e6e59d8245480f531fd856c0 137 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 24.198 T 06-07-2017 IPR011605 NusB antitermination factor GO:0006353 AM402_RS19020 9eaa4eb3e6e59d8245480f531fd856c0 137 Pfam PF01029 NusB family 7 131 1.1E-35 T 06-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM402_RS07590 1293f15f979545695955bd2291f3e5e1 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 8.0E-46 T 06-07-2017 IPR008249 Uncharacterised protein family UPF0231 AM402_RS07590 1293f15f979545695955bd2291f3e5e1 123 PIRSF PIRSF006287 1 120 7.7E-49 T 06-07-2017 IPR008249 Uncharacterised protein family UPF0231 AM402_RS07590 1293f15f979545695955bd2291f3e5e1 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.515 T 06-07-2017 IPR008249 Uncharacterised protein family UPF0231 AM402_RS07590 1293f15f979545695955bd2291f3e5e1 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 5.0E-41 T 06-07-2017 IPR008249 Uncharacterised protein family UPF0231 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 SUPERFAMILY SSF54919 1 140 6.15E-60 T 06-07-2017 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 SMART SM00562 3 140 5.7E-87 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 06-07-2017 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 Gene3D G3DSA:3.30.70.141 1 139 1.5E-60 T 06-07-2017 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.7E-57 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.56 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 9.4E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 9.4E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 9.4E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 9.4E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS08620 2366c77f9a44ead30c3d390154ac4e56 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 9.4E-39 T 06-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS15565 e68be5dc1660c7b1b4f4a575ce232560 557 SUPERFAMILY SSF52540 1 200 3.33E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15565 e68be5dc1660c7b1b4f4a575ce232560 557 SUPERFAMILY SSF52540 258 336 3.33E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15565 e68be5dc1660c7b1b4f4a575ce232560 557 Pfam PF11398 Protein of unknown function (DUF2813) 1 380 8.2E-132 T 06-07-2017 IPR022602 Protein of unknown function DUF2813 AM402_RS15565 e68be5dc1660c7b1b4f4a575ce232560 557 Gene3D G3DSA:3.40.50.300 1 349 9.5E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03695 0b57943175f81d678871cb5744937ecf 372 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 5.8E-23 T 06-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM402_RS03695 0b57943175f81d678871cb5744937ecf 372 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 1.5E-163 T 06-07-2017 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AM402_RS03695 0b57943175f81d678871cb5744937ecf 372 SMART SM00876 258 361 2.1E-33 T 06-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM402_RS03695 0b57943175f81d678871cb5744937ecf 372 Gene3D G3DSA:3.20.20.70 36 362 1.0E-44 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS03695 0b57943175f81d678871cb5744937ecf 372 SUPERFAMILY SSF102114 35 363 2.22E-52 T 06-07-2017 AM402_RS09040 88be918262f629f45176d16321b45f61 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 4.2E-148 T 06-07-2017 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AM402_RS04395 a6b1feb99dd2772c92e7a63327adb467 411 Gene3D G3DSA:3.30.1540.10 243 314 5.5E-11 T 06-07-2017 AM402_RS04395 a6b1feb99dd2772c92e7a63327adb467 411 Gene3D G3DSA:3.40.50.10540 3 222 1.3E-86 T 06-07-2017 IPR023606 CoA-transferase family III domain AM402_RS04395 a6b1feb99dd2772c92e7a63327adb467 411 Gene3D G3DSA:3.40.50.10540 315 406 1.3E-86 T 06-07-2017 IPR023606 CoA-transferase family III domain AM402_RS04395 a6b1feb99dd2772c92e7a63327adb467 411 Pfam PF02515 CoA-transferase family III 7 383 2.0E-85 T 06-07-2017 IPR003673 CoA-transferase family III GO:0003824 AM402_RS04395 a6b1feb99dd2772c92e7a63327adb467 411 SUPERFAMILY SSF89796 3 406 8.63E-99 T 06-07-2017 IPR023606 CoA-transferase family III domain AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 06-07-2017 IPR019844 Cold-shock conserved site AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 7.0E-32 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 PIRSF PIRSF002599 1 70 4.8E-25 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 SMART SM00357 6 70 1.6E-29 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 Gene3D G3DSA:2.40.50.140 5 68 7.5E-31 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 PRINTS PR00050 Cold shock protein signature 43 61 6.7E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 PRINTS PR00050 Cold shock protein signature 7 22 6.7E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 PRINTS PR00050 Cold shock protein signature 28 37 6.7E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS13890 cca7e8c7f4dd8342f41878a33052768c 70 SUPERFAMILY SSF50249 3 69 3.64E-25 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS18515 ad235ec12d1a6e4500503990e63bf39b 445 PIRSF PIRSF002808 2 432 2.4E-118 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM402_RS18515 ad235ec12d1a6e4500503990e63bf39b 445 Gene3D G3DSA:1.20.1250.20 13 200 1.6E-50 T 06-07-2017 AM402_RS18515 ad235ec12d1a6e4500503990e63bf39b 445 Gene3D G3DSA:1.20.1250.20 232 428 2.5E-35 T 06-07-2017 AM402_RS18515 ad235ec12d1a6e4500503990e63bf39b 445 Pfam PF07690 Major Facilitator Superfamily 25 385 4.1E-46 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS18515 ad235ec12d1a6e4500503990e63bf39b 445 SUPERFAMILY SSF103473 12 420 5.49E-75 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS03970 9c8b0c74999882c810813d8d1fde7418 357 Pfam PF00419 Fimbrial protein 209 357 3.0E-11 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS03970 9c8b0c74999882c810813d8d1fde7418 357 SUPERFAMILY SSF49401 215 357 3.18E-17 T 06-07-2017 IPR008966 Adhesion domain AM402_RS03970 9c8b0c74999882c810813d8d1fde7418 357 Gene3D G3DSA:2.60.40.1090 214 357 6.8E-22 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 Gene3D G3DSA:3.40.50.980 9 184 2.1E-40 T 06-07-2017 AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 06-07-2017 IPR020845 AMP-binding, conserved site AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 Gene3D G3DSA:3.30.300.30 424 518 5.5E-28 T 06-07-2017 AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 436 511 5.7E-18 T 06-07-2017 IPR025110 AMP-binding enzyme C-terminal domain AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 Gene3D G3DSA:3.40.50.980 185 344 5.4E-33 T 06-07-2017 AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 SUPERFAMILY SSF56801 8 518 3.66E-137 T 06-07-2017 AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 Hamap MF_01524 Probable crotonobetaine/carnitine-CoA ligase [caiC]. 1 518 86.92 T 06-07-2017 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC GO:0009437|GO:0016878|GO:0051108|GO:0051109 AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 Pfam PF00501 AMP-binding enzyme 17 427 1.1E-91 T 06-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM402_RS04345 f42f737a76c3291365699ce0194ec10b 518 Gene3D G3DSA:2.30.38.10 345 418 3.2E-24 T 06-07-2017 AM402_RS03740 3f55828e218e3b2f5f4162fc9e5c3a9b 222 Pfam PF04493 Endonuclease V 15 205 7.6E-74 T 06-07-2017 IPR007581 Endonuclease V GO:0004519|GO:0006281 AM402_RS03740 3f55828e218e3b2f5f4162fc9e5c3a9b 222 Hamap MF_00801 Endonuclease V [nfi]. 3 215 33.436 T 06-07-2017 IPR007581 Endonuclease V GO:0004519|GO:0006281 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 SUPERFAMILY SSF52374 13 338 1.25E-98 T 06-07-2017 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 Gene3D G3DSA:3.40.50.620 12 213 4.5E-89 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 11 338 3.9E-116 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 29 - T 06-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 203 213 2.7E-29 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 2.7E-29 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 24 40 2.7E-29 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 2.7E-29 T 06-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 Gene3D G3DSA:1.10.240.10 214 332 5.6E-20 T 06-07-2017 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 11 339 41.982 T 06-07-2017 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AM402_RS02455 00c423a1a6acd311b256a0a944d414c2 342 Pfam PF00579 tRNA synthetases class I (W and Y) 9 293 2.1E-86 T 06-07-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS11805 96d4a151ed37d8187187a20cfa5f3930 269 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS11805 96d4a151ed37d8187187a20cfa5f3930 269 SMART SM00382 39 228 1.7E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS11805 96d4a151ed37d8187187a20cfa5f3930 269 Gene3D G3DSA:3.40.50.300 4 252 2.8E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11805 96d4a151ed37d8187187a20cfa5f3930 269 Pfam PF00005 ABC transporter 31 178 1.4E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS11805 96d4a151ed37d8187187a20cfa5f3930 269 SUPERFAMILY SSF52540 5 251 6.02E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15300 cc7e3cc0c30ceac98ddc43ff8a3ecafa 262 Gene3D G3DSA:1.10.10.60 207 261 2.0E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS15300 cc7e3cc0c30ceac98ddc43ff8a3ecafa 262 SUPERFAMILY SSF46689 208 262 8.96E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.2E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.2E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.2E-19 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 SUPERFAMILY SSF47729 1 91 1.05E-30 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 06-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 SMART SM00411 1 91 2.3E-42 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.7E-30 T 06-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.253 T 06-07-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 Gene3D G3DSA:4.10.520.10 1 91 3.2E-34 T 06-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM402_RS15415 2349c5aa744306640071c53c695c9d21 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 5.5E-51 T 06-07-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM402_RS14070 1a42c12544c7489af31d4cf822f1e9ef 283 Pfam PF00574 Clp protease 71 204 1.5E-28 T 06-07-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM402_RS14070 1a42c12544c7489af31d4cf822f1e9ef 283 Gene3D G3DSA:3.90.226.10 38 205 3.9E-40 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS14070 1a42c12544c7489af31d4cf822f1e9ef 283 SUPERFAMILY SSF52096 38 204 1.24E-43 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS14070 1a42c12544c7489af31d4cf822f1e9ef 283 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 6.9E-12 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS14070 1a42c12544c7489af31d4cf822f1e9ef 283 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 6.9E-12 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS14070 1a42c12544c7489af31d4cf822f1e9ef 283 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 6.9E-12 T 06-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM402_RS18210 09352d1426d9f662871a6222853056a0 175 Gene3D G3DSA:2.60.40.1090 29 175 1.7E-43 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18210 09352d1426d9f662871a6222853056a0 175 SUPERFAMILY SSF49401 30 175 2.49E-35 T 06-07-2017 IPR008966 Adhesion domain AM402_RS18210 09352d1426d9f662871a6222853056a0 175 Pfam PF00419 Fimbrial protein 32 175 8.0E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04020 f301302f72952fb81567006e47621b66 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 06-07-2017 IPR020808 Bacterial microcompartments protein, conserved site AM402_RS04020 f301302f72952fb81567006e47621b66 92 SMART SM00877 3 79 5.8E-36 T 06-07-2017 IPR000249 Microcompartment protein, bacteria AM402_RS04020 f301302f72952fb81567006e47621b66 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 45 3.0E-17 T 06-07-2017 AM402_RS04020 f301302f72952fb81567006e47621b66 92 SUPERFAMILY SSF143414 3 88 8.5E-31 T 06-07-2017 AM402_RS04020 f301302f72952fb81567006e47621b66 92 Pfam PF00936 BMC domain 4 79 1.3E-28 T 06-07-2017 IPR000249 Microcompartment protein, bacteria AM402_RS20155 22b08e3b6ac7a49645d9e09237faf5ae 242 Pfam PF02613 Nitrate reductase delta subunit 41 150 9.3E-11 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone AM402_RS20155 22b08e3b6ac7a49645d9e09237faf5ae 242 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 162 1.1E-45 T 06-07-2017 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AM402_RS20155 22b08e3b6ac7a49645d9e09237faf5ae 242 SUPERFAMILY SSF89155 2 165 5.89E-33 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone AM402_RS08145 370f8f6af25a42db924fdcf7ce83582e 217 Pfam PF06940 Domain of unknown function (DUF1287) 60 217 1.2E-63 T 06-07-2017 IPR009706 Protein of unknown function DUF1287 AM402_RS08145 370f8f6af25a42db924fdcf7ce83582e 217 PIRSF PIRSF011444 18 217 6.1E-70 T 06-07-2017 IPR009706 Protein of unknown function DUF1287 AM402_RS08145 370f8f6af25a42db924fdcf7ce83582e 217 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 62 217 2.0E-50 T 06-07-2017 IPR009706 Protein of unknown function DUF1287 AM402_RS20495 4da70df957ef47538b036083d5d9b395 424 Pfam PF00144 Beta-lactamase 82 402 6.6E-53 T 06-07-2017 IPR001466 Beta-lactamase-related AM402_RS20495 4da70df957ef47538b036083d5d9b395 424 Gene3D G3DSA:3.40.710.10 76 411 1.0E-63 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS20495 4da70df957ef47538b036083d5d9b395 424 SUPERFAMILY SSF56601 78 399 4.31E-62 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS12380 ba0b37196ba06c3ce462c86f2bf1ba30 491 SUPERFAMILY SSF56954 3 480 3.92E-69 T 06-07-2017 AM402_RS12380 ba0b37196ba06c3ce462c86f2bf1ba30 491 PIRSF PIRSF001892 11 486 7.3E-121 T 06-07-2017 IPR028351 Cyclolysin transport protein CyaE GO:0005215 AM402_RS12380 ba0b37196ba06c3ce462c86f2bf1ba30 491 Gene3D G3DSA:1.20.1600.10 67 480 3.8E-64 T 06-07-2017 AM402_RS12380 ba0b37196ba06c3ce462c86f2bf1ba30 491 Pfam PF02321 Outer membrane efflux protein 290 478 4.0E-24 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM402_RS12380 ba0b37196ba06c3ce462c86f2bf1ba30 491 Pfam PF02321 Outer membrane efflux protein 70 263 6.8E-25 T 06-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 40 454 1.6E-104 T 06-07-2017 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 Pfam PF13437 HlyD family secretion protein 306 411 5.8E-18 T 06-07-2017 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 433 453 2.8E-50 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 351 375 2.8E-50 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 339 2.8E-50 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 418 433 2.8E-50 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 91 111 2.8E-50 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 375 398 2.8E-50 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 49 72 2.8E-50 T 06-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 Gene3D G3DSA:2.40.50.100 90 113 1.1E-11 T 06-07-2017 AM402_RS07640 7a5f9ffffc369e96c019d251ac330047 454 Gene3D G3DSA:2.40.50.100 303 337 1.1E-11 T 06-07-2017 AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 SUPERFAMILY SSF53271 66 303 9.42E-67 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 1.6E-49 T 06-07-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 2.6E-126 T 06-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 06-07-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 Gene3D G3DSA:3.40.50.2020 157 284 2.8E-53 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 311 49.582 T 06-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 SMART SM01400 1 118 1.7E-76 T 06-07-2017 AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 5.2E-30 T 06-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM402_RS13200 c7123fbc12dc7c67ad9a584852ef3206 312 Gene3D G3DSA:3.40.50.2020 1 156 1.0E-71 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS03385 df2d1c89056377f459812575a30588c4 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 2.8E-46 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03385 df2d1c89056377f459812575a30588c4 339 Gene3D G3DSA:1.10.3720.10 196 332 1.4E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03385 df2d1c89056377f459812575a30588c4 339 Gene3D G3DSA:1.10.3720.10 87 160 1.4E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03385 df2d1c89056377f459812575a30588c4 339 SUPERFAMILY SSF161098 89 160 5.23E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03385 df2d1c89056377f459812575a30588c4 339 SUPERFAMILY SSF161098 200 322 5.23E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS11780 031bb018e992ad31eb322c9568889a3c 217 SUPERFAMILY SSF50475 20 217 2.81E-66 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS11780 031bb018e992ad31eb322c9568889a3c 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 06-07-2017 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS11780 031bb018e992ad31eb322c9568889a3c 217 Gene3D G3DSA:2.30.110.10 15 217 2.8E-81 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS11780 031bb018e992ad31eb322c9568889a3c 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 217 4.1E-91 T 06-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS11780 031bb018e992ad31eb322c9568889a3c 217 PIRSF PIRSF000190 1 217 6.5E-82 T 06-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS11780 031bb018e992ad31eb322c9568889a3c 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 38 122 2.9E-24 T 06-07-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS11780 031bb018e992ad31eb322c9568889a3c 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 7.9E-20 T 06-07-2017 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS11780 031bb018e992ad31eb322c9568889a3c 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 37.46 T 06-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS21235 779c1d47d871f6d3aef1ff94f5d22d23 833 Gene3D G3DSA:3.40.50.300 562 614 3.6E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21235 779c1d47d871f6d3aef1ff94f5d22d23 833 Gene3D G3DSA:3.40.50.300 653 723 3.6E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21235 779c1d47d871f6d3aef1ff94f5d22d23 833 Gene3D G3DSA:3.40.50.300 453 526 3.6E-9 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21235 779c1d47d871f6d3aef1ff94f5d22d23 833 SUPERFAMILY SSF52540 413 764 2.62E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21235 779c1d47d871f6d3aef1ff94f5d22d23 833 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 186 399 1.4E-27 T 06-07-2017 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AM402_RS20540 c021298e49242e0b4c95290256d42e58 143 Gene3D G3DSA:3.30.70.970 4 125 1.1E-51 T 06-07-2017 IPR009671 Regulator of ribonuclease activity B domain AM402_RS20540 c021298e49242e0b4c95290256d42e58 143 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.653 T 06-07-2017 IPR016716 Regulator of ribonuclease activity B AM402_RS20540 c021298e49242e0b4c95290256d42e58 143 Pfam PF06877 Regulator of ribonuclease activity B 12 113 3.0E-32 T 06-07-2017 IPR009671 Regulator of ribonuclease activity B domain AM402_RS20540 c021298e49242e0b4c95290256d42e58 143 PIRSF PIRSF018193 1 141 4.8E-62 T 06-07-2017 IPR016716 Regulator of ribonuclease activity B AM402_RS20540 c021298e49242e0b4c95290256d42e58 143 SUPERFAMILY SSF89946 4 123 2.35E-39 T 06-07-2017 IPR009671 Regulator of ribonuclease activity B domain AM402_RS08285 913cdba1a2b192cc588ff2ca046e7967 478 SUPERFAMILY SSF52540 108 388 6.88E-25 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08285 913cdba1a2b192cc588ff2ca046e7967 478 Pfam PF09397 Ftsk gamma domain 413 473 6.1E-25 T 06-07-2017 IPR018541 FtsK gamma domain AM402_RS08285 913cdba1a2b192cc588ff2ca046e7967 478 SUPERFAMILY SSF46785 412 474 6.35E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS08285 913cdba1a2b192cc588ff2ca046e7967 478 SMART SM00843 411 476 1.9E-29 T 06-07-2017 IPR018541 FtsK gamma domain AM402_RS08285 913cdba1a2b192cc588ff2ca046e7967 478 Gene3D G3DSA:3.40.50.300 80 381 7.3E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08285 913cdba1a2b192cc588ff2ca046e7967 478 Pfam PF01580 FtsK/SpoIIIE family 119 342 6.3E-37 T 06-07-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AM402_RS07115 ac2de149a3c6c04ecd297f1a8c0a7bca 164 SUPERFAMILY SSF52728 5 161 7.98E-47 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM402_RS07115 ac2de149a3c6c04ecd297f1a8c0a7bca 164 Pfam PF03830 PTS system sorbose subfamily IIB component 6 154 6.2E-47 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM402_RS07115 ac2de149a3c6c04ecd297f1a8c0a7bca 164 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 154 3.7E-51 T 06-07-2017 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AM402_RS07115 ac2de149a3c6c04ecd297f1a8c0a7bca 164 Gene3D G3DSA:3.40.35.10 5 161 4.2E-53 T 06-07-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 157 216 7.5E-10 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 Gene3D G3DSA:2.60.40.1070 152 220 1.2E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 Gene3D G3DSA:2.60.40.360 24 138 3.2E-35 T 06-07-2017 IPR008962 PapD-like AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 SUPERFAMILY SSF49354 19 136 1.15E-35 T 06-07-2017 IPR008962 PapD-like AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 PRINTS PR00969 Pili chaperone signature 67 88 3.0E-22 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 PRINTS PR00969 Pili chaperone signature 24 33 3.0E-22 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 PRINTS PR00969 Pili chaperone signature 120 135 3.0E-22 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 PRINTS PR00969 Pili chaperone signature 95 112 3.0E-22 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 94 111 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 SUPERFAMILY SSF49584 149 218 4.71E-13 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS13250 10dd23ed3f6fb3cc67ed34a24d59284c 222 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 138 1.2E-30 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS05250 2a715b44da995d12e37c2b8250dbd535 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 59 69 3.9E-9 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM402_RS05250 2a715b44da995d12e37c2b8250dbd535 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 70 81 3.9E-9 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM402_RS05250 2a715b44da995d12e37c2b8250dbd535 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 98 110 3.9E-9 T 06-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM402_RS05250 2a715b44da995d12e37c2b8250dbd535 149 Gene3D G3DSA:2.10.109.10 32 146 7.2E-48 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS05250 2a715b44da995d12e37c2b8250dbd535 149 Pfam PF00717 Peptidase S24-like 62 128 6.0E-14 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS05250 2a715b44da995d12e37c2b8250dbd535 149 SUPERFAMILY SSF51306 21 143 1.05E-34 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS19555 d403d91764149fc2582ec918343b22a5 125 Pfam PF02021 Uncharacterised protein family UPF0102 14 105 4.0E-26 T 06-07-2017 IPR003509 Uncharacterised protein family UPF0102 AM402_RS19555 d403d91764149fc2582ec918343b22a5 125 SUPERFAMILY SSF52980 8 114 6.33E-20 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM402_RS19555 d403d91764149fc2582ec918343b22a5 125 Gene3D G3DSA:3.40.1350.10 13 121 1.5E-33 T 06-07-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 AM402_RS19555 d403d91764149fc2582ec918343b22a5 125 Hamap MF_00048 UPF0102 protein YraN [yraN]. 7 119 21.56 T 06-07-2017 IPR003509 Uncharacterised protein family UPF0102 AM402_RS19555 d403d91764149fc2582ec918343b22a5 125 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 10 119 1.9E-36 T 06-07-2017 IPR003509 Uncharacterised protein family UPF0102 AM402_RS05100 217f86eefca77090c95510eb961c9d21 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 260 9.3E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS05100 217f86eefca77090c95510eb961c9d21 270 Gene3D G3DSA:1.10.3720.10 64 262 2.0E-22 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS05100 217f86eefca77090c95510eb961c9d21 270 SUPERFAMILY SSF161098 65 255 4.45E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS04330 f4a6cd9456d420d2b2c01e1a1784a3c6 130 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 1 130 1.0E-72 T 06-07-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 AM402_RS04330 f4a6cd9456d420d2b2c01e1a1784a3c6 130 Pfam PF07180 Protein of unknown function (DUF1401) 8 64 2.6E-8 T 06-07-2017 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 AM402_RS03705 0c3d5840ae1c0279b64cb10e34775cac 66 SUPERFAMILY SSF54285 1 66 9.45E-16 T 06-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM402_RS03705 0c3d5840ae1c0279b64cb10e34775cac 66 Gene3D G3DSA:3.10.20.30 1 66 1.6E-21 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS03705 0c3d5840ae1c0279b64cb10e34775cac 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.6E-18 T 06-07-2017 IPR010035 ThiS, thiamine-biosynthesis AM402_RS03705 0c3d5840ae1c0279b64cb10e34775cac 66 Pfam PF02597 ThiS family 8 66 3.5E-11 T 06-07-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 SMART SM00434 11 500 3.8E-294 T 06-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 842 24.662 T 06-07-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Gene3D G3DSA:3.90.199.10 34 216 1.6E-84 T 06-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 689 5.7E-9 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 794 840 5.7E-13 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 790 4.0E-13 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 638 9.8E-12 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 541 585 1.7E-9 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 695 738 1.1E-12 T 06-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 SUPERFAMILY SSF101904 534 851 3.79E-112 T 06-07-2017 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 SUPERFAMILY SSF56719 30 522 7.85E-183 T 06-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Gene3D G3DSA:3.30.1360.40 236 333 9.9E-39 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 3.7E-152 T 06-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Gene3D G3DSA:1.10.268.10 363 498 3.2E-48 T 06-07-2017 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 Gene3D G3DSA:2.120.10.90 532 841 4.5E-142 T 06-07-2017 AM402_RS09265 06b95fb23bf7bd9e2043d00b17ff1cc5 877 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 841 0.0 T 06-07-2017 AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 SUPERFAMILY SSF51735 29 209 1.97E-56 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 Gene3D G3DSA:1.10.1040.10 362 481 2.7E-16 T 06-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 Gene3D G3DSA:3.40.50.720 1 201 3.6E-74 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 485 39.086 T 06-07-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 9.2E-131 T 06-07-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 1.3E-27 T 06-07-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 482 1.2E-23 T 06-07-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 SUPERFAMILY SSF48179 348 484 9.69E-42 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.5E-57 T 06-07-2017 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM402_RS00720 c9c7b605da7293ff5c0d7b8adcf24014 491 SUPERFAMILY SSF48179 210 368 3.57E-41 T 06-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM402_RS01910 2a2e391198914a0fadb41a948799857f 86 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 82 7.6E-33 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AM402_RS01910 2a2e391198914a0fadb41a948799857f 86 SMART SM01234 8 75 3.1E-44 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AM402_RS01910 2a2e391198914a0fadb41a948799857f 86 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 1.0E-25 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AM402_RS01910 2a2e391198914a0fadb41a948799857f 86 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.418 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AM402_RS01910 2a2e391198914a0fadb41a948799857f 86 Pfam PF01809 Haemolytic domain 10 75 1.3E-29 T 06-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 PIRSF PIRSF000446 12 311 1.5E-61 T 06-07-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 Gene3D G3DSA:3.30.70.250 137 205 2.4E-4 T 06-07-2017 AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 SUPERFAMILY SSF52151 207 298 1.46E-49 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 SUPERFAMILY SSF52151 16 138 1.46E-49 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 Pfam PF00698 Acyl transferase domain 18 284 2.1E-24 T 06-07-2017 IPR014043 Acyl transferase AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 SUPERFAMILY SSF55048 139 205 8.63E-7 T 06-07-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 Gene3D G3DSA:3.40.366.10 206 299 1.2E-47 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 Gene3D G3DSA:3.40.366.10 9 132 1.2E-47 T 06-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AM402_RS03130 e6718bb6df9e42e6537aa6b701dbfce6 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 17 304 6.2E-12 T 06-07-2017 IPR020801 Polyketide synthase, acyl transferase domain AM402_RS02305 ebac6e93719a9366269cf192f2e45b4e 156 SUPERFAMILY SSF81573 63 121 2.09E-14 T 06-07-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM402_RS02305 ebac6e93719a9366269cf192f2e45b4e 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.422 T 06-07-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM402_RS02305 ebac6e93719a9366269cf192f2e45b4e 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 6.8E-57 T 06-07-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 AM402_RS02305 ebac6e93719a9366269cf192f2e45b4e 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.7E-37 T 06-07-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM402_RS02305 ebac6e93719a9366269cf192f2e45b4e 156 Gene3D G3DSA:1.20.5.620 63 122 1.1E-22 T 06-07-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 Pfam PF00271 Helicase conserved C-terminal domain 523 590 7.3E-6 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 Gene3D G3DSA:3.40.50.300 197 382 3.7E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 733 24.991 T 06-07-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 Pfam PF00270 DEAD/DEAH box helicase 223 363 7.8E-13 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 1.0E-198 T 06-07-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 Gene3D G3DSA:3.40.50.300 457 633 2.0E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 SMART SM00487 196 396 1.5E-11 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 SUPERFAMILY SSF52540 218 441 1.1E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 SUPERFAMILY SSF52540 504 602 1.1E-39 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01230 3baac0b41eb15512d76e507ae0ef9fdf 733 SMART SM00490 493 590 5.4E-9 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS02795 4fcc2cf6cdb98b07486db8ade5ba4198 415 Gene3D G3DSA:1.20.1250.20 198 407 3.4E-23 T 06-07-2017 AM402_RS02795 4fcc2cf6cdb98b07486db8ade5ba4198 415 Gene3D G3DSA:1.20.1250.20 9 184 1.4E-7 T 06-07-2017 AM402_RS02795 4fcc2cf6cdb98b07486db8ade5ba4198 415 Pfam PF03825 Nucleoside H+ symporter 3 395 4.8E-81 T 06-07-2017 AM402_RS02795 4fcc2cf6cdb98b07486db8ade5ba4198 415 SUPERFAMILY SSF103473 8 403 1.7E-29 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS20345 6bbb9cc885631e0087fd5f16e17ad5ef 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 06-07-2017 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM402_RS20345 6bbb9cc885631e0087fd5f16e17ad5ef 252 Pfam PF01048 Phosphorylase superfamily 19 228 3.9E-38 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS20345 6bbb9cc885631e0087fd5f16e17ad5ef 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 251 8.4E-119 T 06-07-2017 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3 AM402_RS20345 6bbb9cc885631e0087fd5f16e17ad5ef 252 SUPERFAMILY SSF53167 4 248 1.31E-72 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS20345 6bbb9cc885631e0087fd5f16e17ad5ef 252 Gene3D G3DSA:3.40.50.1580 4 250 2.1E-82 T 06-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM402_RS16155 a18fd8e017e69d1611f8579c39851a4c 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 500 3.7E-174 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AM402_RS16155 a18fd8e017e69d1611f8579c39851a4c 522 PIRSF PIRSF006446 1 522 8.3E-141 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AM402_RS06345 0dc6659ac3a24880a02db2427d2d40cc 226 Pfam PF17185 NlpE C-terminal OB domain 131 219 1.7E-29 T 06-07-2017 IPR033450 NlpE, C-terminal OB domain AM402_RS06345 0dc6659ac3a24880a02db2427d2d40cc 226 Pfam PF04170 NlpE N-terminal domain 38 122 2.2E-24 T 06-07-2017 IPR007298 Copper resistance lipoprotein NlpE AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 SUPERFAMILY SSF55874 6 215 2.62E-67 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 SMART SM00387 29 186 8.1E-11 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 PIRSF PIRSF002583 1 627 2.9E-223 T 06-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 624 32.755 T 06-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 SUPERFAMILY SSF54211 230 485 1.82E-100 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 06-07-2017 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 PRINTS PR00775 90kDa heat shock protein signature 192 210 5.6E-66 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 PRINTS PR00775 90kDa heat shock protein signature 28 50 5.6E-66 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 PRINTS PR00775 90kDa heat shock protein signature 174 191 5.6E-66 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 PRINTS PR00775 90kDa heat shock protein signature 7 27 5.6E-66 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 PRINTS PR00775 90kDa heat shock protein signature 95 112 5.6E-66 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 PRINTS PR00775 90kDa heat shock protein signature 77 94 5.6E-66 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 PRINTS PR00775 90kDa heat shock protein signature 122 144 5.6E-66 T 06-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 Pfam PF00183 Hsp90 protein 213 626 4.5E-127 T 06-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 SUPERFAMILY SSF110942 511 624 8.37E-35 T 06-07-2017 AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 4.8E-16 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS06735 bc104f0366ace9d12d6c464ec798d70d 627 Gene3D G3DSA:3.30.565.10 7 238 7.6E-85 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS06960 b9072ba8d3450f11b063d0b3adc1725e 915 SMART SM00778 32 68 4.9E-14 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM402_RS06960 b9072ba8d3450f11b063d0b3adc1725e 915 Pfam PF06048 Domain of unknown function (DUF927) 359 638 2.9E-47 T 06-07-2017 IPR009270 Domain of unknown function DUF927 AM402_RS06960 b9072ba8d3450f11b063d0b3adc1725e 915 SMART SM00493 215 295 0.0048 T 06-07-2017 IPR006171 Toprim domain AM402_RS06960 b9072ba8d3450f11b063d0b3adc1725e 915 SUPERFAMILY SSF57783 13 94 4.08E-11 T 06-07-2017 AM402_RS06960 b9072ba8d3450f11b063d0b3adc1725e 915 Pfam PF13362 Toprim domain 216 314 7.5E-12 T 06-07-2017 IPR006171 Toprim domain AM402_RS06960 b9072ba8d3450f11b063d0b3adc1725e 915 Pfam PF08273 Zinc-binding domain of primase-helicase 34 68 2.3E-13 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM402_RS06960 b9072ba8d3450f11b063d0b3adc1725e 915 Gene3D G3DSA:3.90.580.10 33 94 7.6E-7 T 06-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM402_RS08135 b29eca2fd400fcdb6d46c175d8a1ac39 285 Pfam PF00756 Putative esterase 47 215 1.2E-13 T 06-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 AM402_RS08135 b29eca2fd400fcdb6d46c175d8a1ac39 285 SUPERFAMILY SSF53474 40 281 7.32E-42 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS08135 b29eca2fd400fcdb6d46c175d8a1ac39 285 Gene3D G3DSA:3.40.50.1820 41 282 4.0E-52 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS01335 93263736885d418664699471a97d0452 123 SUPERFAMILY SSF53756 3 115 2.9E-9 T 06-07-2017 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 SUPERFAMILY SSF53150 117 270 1.2E-43 T 06-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Pfam PF05192 MutS domain III 273 560 1.5E-39 T 06-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.496 T 06-07-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Pfam PF00488 MutS domain V 611 798 2.0E-87 T 06-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 SMART SM00534 608 795 3.2E-121 T 06-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 SUPERFAMILY SSF55271 6 118 6.41E-43 T 06-07-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Gene3D G3DSA:3.30.420.110 129 259 1.0E-42 T 06-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 06-07-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Pfam PF05188 MutS domain II 131 257 5.3E-33 T 06-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Gene3D G3DSA:3.40.50.300 568 798 1.1E-82 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 PIRSF PIRSF037677 2 840 1.3E-155 T 06-07-2017 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 SUPERFAMILY SSF52540 568 798 1.22E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 SMART SM00533 287 592 2.6E-103 T 06-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 689 705 - T 06-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Pfam PF01624 MutS domain I 11 122 5.3E-43 T 06-07-2017 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 SUPERFAMILY SSF48334 271 567 3.27E-89 T 06-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Gene3D G3DSA:1.10.1420.10 319 478 1.3E-53 T 06-07-2017 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Pfam PF05190 MutS family domain IV 429 518 1.0E-28 T 06-07-2017 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AM402_RS06520 0d6c4e05779c734485bc11bd92257a53 854 Gene3D G3DSA:3.40.1170.10 4 123 1.1E-52 T 06-07-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AM402_RS12185 a4f340a2e295532dc989e69cc4e636ea 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.3E-90 T 06-07-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AM402_RS12185 a4f340a2e295532dc989e69cc4e636ea 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 5.7E-62 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM402_RS12185 a4f340a2e295532dc989e69cc4e636ea 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.541 T 06-07-2017 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AM402_RS12185 a4f340a2e295532dc989e69cc4e636ea 193 PIRSF PIRSF006102 1 193 4.2E-61 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 152 2.0E-44 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 SUPERFAMILY SSF46785 3 76 3.17E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 SUPERFAMILY SSF55252 82 151 3.66E-18 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 Gene3D G3DSA:3.30.1360.40 80 154 5.1E-25 T 06-07-2017 IPR024946 Arginine repressor C-terminal-like domain AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 1.0E-24 T 06-07-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 2.3E-21 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 Gene3D G3DSA:1.10.10.10 2 77 1.4E-34 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.7E-23 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.7E-23 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.7E-23 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.7E-23 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 2.0E-23 T 06-07-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AM402_RS00235 2f397fb30c6b94b1e33dda8cd807245d 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.352 T 06-07-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 AM402_RS10270 21f17fd90dd8d8d8696a6d994e9943c9 749 Pfam PF00593 TonB dependent receptor 463 746 3.5E-24 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS10270 21f17fd90dd8d8d8696a6d994e9943c9 749 Gene3D G3DSA:2.170.130.10 65 168 6.7E-26 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS10270 21f17fd90dd8d8d8696a6d994e9943c9 749 Gene3D G3DSA:2.40.170.20 169 749 4.0E-47 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS10270 21f17fd90dd8d8d8696a6d994e9943c9 749 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 732 749 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site AM402_RS10270 21f17fd90dd8d8d8696a6d994e9943c9 749 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 163 7.4E-8 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS10270 21f17fd90dd8d8d8696a6d994e9943c9 749 SUPERFAMILY SSF56935 568 749 2.2E-59 T 06-07-2017 AM402_RS10270 21f17fd90dd8d8d8696a6d994e9943c9 749 SUPERFAMILY SSF56935 66 539 2.2E-59 T 06-07-2017 AM402_RS21800 fcbced2eee7f34a4aa33fbc2beb14e1b 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 6.4E-20 T 06-07-2017 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AM402_RS21800 fcbced2eee7f34a4aa33fbc2beb14e1b 334 Pfam PF01548 Transposase 7 146 5.2E-19 T 06-07-2017 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AM402_RS02265 89a637fe38403930f6a608828b9afcaf 273 Pfam PF08722 TnsA endonuclease N terminal 75 165 1.5E-27 T 06-07-2017 IPR014833 TnsA endonuclease, N-terminal AM402_RS02265 89a637fe38403930f6a608828b9afcaf 273 Pfam PF08721 TnsA endonuclease C terminal 167 245 2.4E-13 T 06-07-2017 IPR014832 TnsA endonuclease C-terminal AM402_RS02265 89a637fe38403930f6a608828b9afcaf 273 SUPERFAMILY SSF46785 169 267 1.6E-41 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02265 89a637fe38403930f6a608828b9afcaf 273 Gene3D G3DSA:1.10.10.10 170 267 1.1E-33 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02265 89a637fe38403930f6a608828b9afcaf 273 Gene3D G3DSA:3.40.1350.10 8 168 3.4E-70 T 06-07-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 AM402_RS02265 89a637fe38403930f6a608828b9afcaf 273 SUPERFAMILY SSF52980 9 168 2.14E-68 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM402_RS16640 7fdb9df01de2701750de950d50fe2ec7 112 Pfam PF10765 Protein of unknown function (DUF2591) 3 106 5.8E-27 T 06-07-2017 IPR019701 Bacteriophage P22, NinX AM402_RS11365 9774fba0e396aeb7f46bcea2827ac1f1 331 SUPERFAMILY SSF54171 12 56 2.48E-12 T 06-07-2017 IPR016177 DNA-binding domain GO:0003677 AM402_RS11365 9774fba0e396aeb7f46bcea2827ac1f1 331 Gene3D G3DSA:1.10.443.10 173 326 3.5E-28 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS11365 9774fba0e396aeb7f46bcea2827ac1f1 331 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 1 64 7.2E-13 T 06-07-2017 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 AM402_RS11365 9774fba0e396aeb7f46bcea2827ac1f1 331 Pfam PF00589 Phage integrase family 176 323 6.8E-18 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS11365 9774fba0e396aeb7f46bcea2827ac1f1 331 SUPERFAMILY SSF56349 71 325 7.06E-48 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS11365 9774fba0e396aeb7f46bcea2827ac1f1 331 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 72 126 6.0E-5 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS11365 9774fba0e396aeb7f46bcea2827ac1f1 331 Gene3D G3DSA:3.30.160.60 1 58 3.7E-20 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AM402_RS11365 9774fba0e396aeb7f46bcea2827ac1f1 331 Gene3D G3DSA:1.10.150.130 72 169 6.1E-27 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS12280 e5471efb10814a677ac0460a5d7f4723 169 Pfam PF13527 Acetyltransferase (GNAT) domain 13 124 2.8E-14 T 06-07-2017 AM402_RS12280 e5471efb10814a677ac0460a5d7f4723 169 Gene3D G3DSA:3.40.630.30 9 129 9.5E-18 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS12280 e5471efb10814a677ac0460a5d7f4723 169 SUPERFAMILY SSF55729 16 134 1.15E-21 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 SUPERFAMILY SSF51905 107 271 2.85E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 SUPERFAMILY SSF51905 1 54 2.85E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 SUPERFAMILY SSF51905 359 422 2.85E-52 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 SUPERFAMILY SSF54373 269 359 1.83E-14 T 06-07-2017 AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 Gene3D G3DSA:3.30.9.10 270 314 1.7E-12 T 06-07-2017 AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 Gene3D G3DSA:3.30.9.10 135 193 1.7E-12 T 06-07-2017 AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 Gene3D G3DSA:3.40.50.720 347 415 2.5E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 Gene3D G3DSA:3.40.50.720 194 269 2.5E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 Gene3D G3DSA:3.40.50.720 1 96 2.5E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 48.669 T 06-07-2017 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AM402_RS10770 bc93bacd60c8312b70fcae2da68d6875 434 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.5E-66 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM402_RS04830 4dd532e19223ee640e82f18a932926c0 504 Pfam PF07916 TraG-like protein, N-terminal region 8 483 2.3E-101 T 06-07-2017 IPR012931 TraG-like, N-terminal AM402_RS13115 db52733895a3dd95857920387c033b75 400 Gene3D G3DSA:1.20.1250.20 207 386 4.6E-17 T 06-07-2017 AM402_RS13115 db52733895a3dd95857920387c033b75 400 Gene3D G3DSA:1.20.1250.20 17 188 1.9E-24 T 06-07-2017 AM402_RS13115 db52733895a3dd95857920387c033b75 400 Pfam PF07690 Major Facilitator Superfamily 20 232 2.6E-22 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS13115 db52733895a3dd95857920387c033b75 400 SUPERFAMILY SSF103473 14 392 1.16E-50 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS13115 db52733895a3dd95857920387c033b75 400 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 400 39.952 T 06-07-2017 IPR022855 Multidrug resistance protein MdtH AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 Gene3D G3DSA:3.30.70.1430 49 150 6.3E-29 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1036 35.533 T 06-07-2017 IPR022831 Multidrug resistance protein MdtB AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82693 49 142 4.19E-23 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 Gene3D G3DSA:3.30.2090.10 719 800 2.9E-14 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 Gene3D G3DSA:3.30.2090.10 192 273 4.7E-17 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82866 826 1023 1.83E-44 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82714 719 800 1.96E-13 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 6.7E-81 T 06-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 Gene3D G3DSA:1.20.1640.10 294 509 4.7E-57 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82693 802 851 3.92E-8 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82693 676 715 3.92E-8 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 Gene3D G3DSA:1.10.3850.10 807 1024 4.6E-55 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82866 299 499 1.44E-46 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82714 192 274 1.09E-15 T 06-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82693 565 661 1.22E-14 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 Gene3D G3DSA:3.30.70.1430 568 656 2.0E-9 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82693 146 191 3.14E-20 T 06-07-2017 AM402_RS10060 aebcc0ee4921ede288759a4a14ece7c0 1043 SUPERFAMILY SSF82693 277 333 3.14E-20 T 06-07-2017 AM402_RS15835 e05a2350a436799115296a72b6d67400 459 SUPERFAMILY SSF103378 1 447 2.09E-111 T 06-07-2017 IPR005656 MmgE/PrpD GO:0016829 AM402_RS15835 e05a2350a436799115296a72b6d67400 459 Gene3D G3DSA:3.30.1330.120 268 411 9.9E-21 T 06-07-2017 AM402_RS15835 e05a2350a436799115296a72b6d67400 459 Pfam PF03972 MmgE/PrpD family 5 440 3.6E-115 T 06-07-2017 IPR005656 MmgE/PrpD GO:0016829 AM402_RS05150 e9836d4d90b7e709b9bd780e66168ce1 379 SUPERFAMILY SSF48452 81 169 7.59E-10 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS05150 e9836d4d90b7e709b9bd780e66168ce1 379 Pfam PF02698 DUF218 domain 208 333 8.5E-22 T 06-07-2017 IPR003848 Domain of unknown function DUF218 AM402_RS05150 e9836d4d90b7e709b9bd780e66168ce1 379 Gene3D G3DSA:3.40.50.620 201 323 9.7E-20 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS05150 e9836d4d90b7e709b9bd780e66168ce1 379 Gene3D G3DSA:1.25.40.10 88 173 9.9E-10 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS06855 0b348d5dbf3a2621352a47807e4949f5 173 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 14 168 5.9E-64 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM402_RS06855 0b348d5dbf3a2621352a47807e4949f5 173 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 14 167 31.221 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM402_RS06855 0b348d5dbf3a2621352a47807e4949f5 173 Gene3D G3DSA:3.40.50.7700 8 168 2.1E-73 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM402_RS06855 0b348d5dbf3a2621352a47807e4949f5 173 Pfam PF00731 AIR carboxylase 14 161 8.0E-62 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM402_RS06855 0b348d5dbf3a2621352a47807e4949f5 173 SMART SM01001 12 163 2.0E-99 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM402_RS06855 0b348d5dbf3a2621352a47807e4949f5 173 SUPERFAMILY SSF52255 13 170 6.15E-65 T 06-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM402_RS06855 0b348d5dbf3a2621352a47807e4949f5 173 PIRSF PIRSF001338 9 172 7.5E-66 T 06-07-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AM402_RS08040 d7ffa7a4f44c37d8b4dee85f081ee342 286 Pfam PF16806 Antiactivator protein ExsD 49 284 3.3E-94 T 06-07-2017 IPR031835 Antiactivator protein ExsD AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 SUPERFAMILY SSF50447 262 393 4.01E-27 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 SUPERFAMILY SSF54980 393 468 9.35E-17 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 06-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 Gene3D G3DSA:2.40.30.10 293 394 4.8E-23 T 06-07-2017 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 Gene3D G3DSA:3.30.70.870 395 464 8.9E-13 T 06-07-2017 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 SUPERFAMILY SSF52540 9 277 2.38E-83 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 4.1E-9 T 06-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 153 8.5E-18 T 06-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.76 T 06-07-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 7.3E-46 T 06-07-2017 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 06-07-2017 IPR031157 Tr-type G domain, conserved site AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 Gene3D G3DSA:3.40.50.300 9 283 2.0E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 0.0 T 06-07-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AM402_RS05570 c746d61ca1c571f0370bc9208896f425 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.5E-46 T 06-07-2017 IPR032090 Peptide chain release factor 3, C-terminal AM402_RS09530 2244b494289042a0eb7087e69e2ff8b0 342 Pfam PF03916 Polysulphide reductase, NrfD 15 292 2.0E-22 T 06-07-2017 IPR005614 NrfD family AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 3.5E-38 T 06-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 4.8E-30 T 06-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.826 T 06-07-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 Gene3D G3DSA:3.10.20.80 11 86 4.1E-35 T 06-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 SUPERFAMILY SSF54364 13 86 1.83E-28 T 06-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 3.8E-75 T 06-07-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 Gene3D G3DSA:3.30.110.10 87 179 1.7E-40 T 06-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 SUPERFAMILY SSF55200 90 179 5.1E-35 T 06-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM402_RS13390 5c775782add8534ee3b795c9b238dc57 179 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 06-07-2017 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AM402_RS19570 0d41f2c6690135e291a88c328d7bf412 205 SUPERFAMILY SSF52540 4 199 1.2E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19570 0d41f2c6690135e291a88c328d7bf412 205 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 179 5.2E-41 T 06-07-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM402_RS19570 0d41f2c6690135e291a88c328d7bf412 205 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 200 4.8E-104 T 06-07-2017 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AM402_RS19570 0d41f2c6690135e291a88c328d7bf412 205 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 204 47.063 T 06-07-2017 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AM402_RS19570 0d41f2c6690135e291a88c328d7bf412 205 PIRSF PIRSF005624 2 205 2.5E-51 T 06-07-2017 AM402_RS19570 0d41f2c6690135e291a88c328d7bf412 205 Gene3D G3DSA:3.40.50.300 7 195 6.6E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14365 520bdd48a2f619048bd19710a04a6b92 328 SUPERFAMILY SSF48019 209 324 7.65E-28 T 06-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM402_RS14365 520bdd48a2f619048bd19710a04a6b92 328 Gene3D G3DSA:1.20.272.10 208 324 2.9E-36 T 06-07-2017 AM402_RS14365 520bdd48a2f619048bd19710a04a6b92 328 Pfam PF13177 DNA polymerase III, delta subunit 8 166 2.6E-44 T 06-07-2017 AM402_RS14365 520bdd48a2f619048bd19710a04a6b92 328 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 320 2.2E-35 T 06-07-2017 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS14365 520bdd48a2f619048bd19710a04a6b92 328 Gene3D G3DSA:3.40.50.300 4 166 3.2E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14365 520bdd48a2f619048bd19710a04a6b92 328 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 199 5.9E-59 T 06-07-2017 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS14365 520bdd48a2f619048bd19710a04a6b92 328 SUPERFAMILY SSF52540 1 207 1.87E-44 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 Gene3D G3DSA:1.10.1020.10 59 161 3.1E-29 T 06-07-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 4 268 1.3E-71 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 Gene3D G3DSA:3.40.50.150 165 270 1.3E-41 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 Gene3D G3DSA:3.40.50.150 3 58 1.3E-41 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 254 1.2E-55 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 SUPERFAMILY SSF53335 4 268 1.56E-56 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 PIRSF PIRSF000398 1 274 1.4E-58 T 06-07-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 180 192 4.0E-15 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 30 44 4.0E-15 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 4.0E-15 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS07800 c252159f4dea981ff1de1144884dc9d1 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 4.0E-15 T 06-07-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AM402_RS20825 66ee54422dc4e77c46e15b84ac6484a2 176 SUPERFAMILY SSF50249 5 167 8.57E-57 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS20825 66ee54422dc4e77c46e15b84ac6484a2 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 167 9.8E-51 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS20825 66ee54422dc4e77c46e15b84ac6484a2 176 Pfam PF00436 Single-strand binding protein family 6 110 1.0E-38 T 06-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM402_RS20825 66ee54422dc4e77c46e15b84ac6484a2 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 114 34.854 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS20825 66ee54422dc4e77c46e15b84ac6484a2 176 Gene3D G3DSA:2.40.50.140 3 167 2.0E-55 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS12425 d63c984a650a87fa59ec1bd6d3967f2e 466 SUPERFAMILY SSF51338 26 83 1.64E-35 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS12425 d63c984a650a87fa59ec1bd6d3967f2e 466 SUPERFAMILY SSF51338 380 454 1.64E-35 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS12425 d63c984a650a87fa59ec1bd6d3967f2e 466 Gene3D G3DSA:2.30.40.10 22 85 7.3E-21 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS12425 d63c984a650a87fa59ec1bd6d3967f2e 466 Gene3D G3DSA:2.30.40.10 390 432 7.3E-21 T 06-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM402_RS12425 d63c984a650a87fa59ec1bd6d3967f2e 466 SUPERFAMILY SSF51556 83 381 2.37E-81 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS12425 d63c984a650a87fa59ec1bd6d3967f2e 466 Pfam PF01979 Amidohydrolase family 80 428 7.9E-62 T 06-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AM402_RS12425 d63c984a650a87fa59ec1bd6d3967f2e 466 Gene3D G3DSA:3.20.20.140 86 389 8.4E-88 T 06-07-2017 AM402_RS08085 4f86926ccf4151c973f9f784fe8131e2 145 PRINTS PR01438 Universal stress protein signature 106 118 5.6E-11 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS08085 4f86926ccf4151c973f9f784fe8131e2 145 PRINTS PR01438 Universal stress protein signature 123 145 5.6E-11 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS08085 4f86926ccf4151c973f9f784fe8131e2 145 PRINTS PR01438 Universal stress protein signature 2 20 5.6E-11 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS08085 4f86926ccf4151c973f9f784fe8131e2 145 Gene3D G3DSA:3.40.50.620 1 145 5.2E-26 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS08085 4f86926ccf4151c973f9f784fe8131e2 145 SUPERFAMILY SSF52402 1 145 1.51E-23 T 06-07-2017 AM402_RS08085 4f86926ccf4151c973f9f784fe8131e2 145 Pfam PF00582 Universal stress protein family 1 145 8.6E-23 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS19220 d6b57092dcd245d8122623cbf3b60bb3 88 Pfam PF01455 HupF/HypC family 1 72 7.7E-24 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS19220 d6b57092dcd245d8122623cbf3b60bb3 88 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 77 2.3E-22 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS19220 d6b57092dcd245d8122623cbf3b60bb3 88 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 5.6E-20 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS19220 d6b57092dcd245d8122623cbf3b60bb3 88 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 5.6E-20 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS19220 d6b57092dcd245d8122623cbf3b60bb3 88 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 5.6E-20 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS19220 d6b57092dcd245d8122623cbf3b60bb3 88 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 5.6E-20 T 06-07-2017 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AM402_RS19220 d6b57092dcd245d8122623cbf3b60bb3 88 SUPERFAMILY SSF159127 1 81 3.66E-22 T 06-07-2017 AM402_RS19220 d6b57092dcd245d8122623cbf3b60bb3 88 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 06-07-2017 IPR019812 Hydrogenase assembly chaperone, conserved site AM402_RS10130 3590953617766f0e20c4d585c2ee3e93 346 Gene3D G3DSA:3.90.650.10 171 344 1.9E-68 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS10130 3590953617766f0e20c4d585c2ee3e93 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 164 2.0E-16 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS10130 3590953617766f0e20c4d585c2ee3e93 346 SUPERFAMILY SSF56042 171 339 2.54E-62 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS10130 3590953617766f0e20c4d585c2ee3e93 346 SUPERFAMILY SSF55326 7 170 1.79E-54 T 06-07-2017 AM402_RS10130 3590953617766f0e20c4d585c2ee3e93 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 47.415 T 06-07-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS10130 3590953617766f0e20c4d585c2ee3e93 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 342 1.5E-34 T 06-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AM402_RS10130 3590953617766f0e20c4d585c2ee3e93 346 Gene3D G3DSA:3.30.1330.10 22 170 2.3E-64 T 06-07-2017 IPR016188 PurM-like, N-terminal domain AM402_RS10130 3590953617766f0e20c4d585c2ee3e93 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 3.3E-149 T 06-07-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM402_RS03075 6d6ede54fe91b48fbf88ea71018cad95 122 SUPERFAMILY SSF56214 1 121 6.28E-26 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS03075 6d6ede54fe91b48fbf88ea71018cad95 122 Gene3D G3DSA:3.90.470.20 1 121 4.0E-30 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS03075 6d6ede54fe91b48fbf88ea71018cad95 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 122 18.924 T 06-07-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM402_RS03075 6d6ede54fe91b48fbf88ea71018cad95 122 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 120 2.6E-23 T 06-07-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM402_RS03075 6d6ede54fe91b48fbf88ea71018cad95 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 6 89 6.0E-16 T 06-07-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM402_RS03075 6d6ede54fe91b48fbf88ea71018cad95 122 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 120 2.7E-24 T 06-07-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AM402_RS03075 6d6ede54fe91b48fbf88ea71018cad95 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 2 119 5.8E-19 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS08950 c9b5b6647d1a3f89be3f77db86dd0c16 306 SUPERFAMILY SSF103481 42 139 7.06E-13 T 06-07-2017 AM402_RS08950 c9b5b6647d1a3f89be3f77db86dd0c16 306 Pfam PF00892 EamA-like transporter family 2 136 1.1E-22 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS08950 c9b5b6647d1a3f89be3f77db86dd0c16 306 Pfam PF00892 EamA-like transporter family 151 282 1.3E-17 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS08950 c9b5b6647d1a3f89be3f77db86dd0c16 306 SUPERFAMILY SSF103481 212 283 1.07E-9 T 06-07-2017 AM402_RS06755 7efee5b265df6579b83330a3e88cac82 436 Gene3D G3DSA:3.30.1110.10 47 97 3.3E-6 T 06-07-2017 AM402_RS06755 7efee5b265df6579b83330a3e88cac82 436 Pfam PF00294 pfkB family carbohydrate kinase 140 296 1.5E-9 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS06755 7efee5b265df6579b83330a3e88cac82 436 Gene3D G3DSA:3.40.1190.20 339 436 9.5E-48 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS06755 7efee5b265df6579b83330a3e88cac82 436 Gene3D G3DSA:3.40.1190.20 98 300 9.5E-48 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS06755 7efee5b265df6579b83330a3e88cac82 436 SUPERFAMILY SSF53613 38 307 4.09E-45 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS06755 7efee5b265df6579b83330a3e88cac82 436 SUPERFAMILY SSF53613 340 418 4.09E-45 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS06755 7efee5b265df6579b83330a3e88cac82 436 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 354 367 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS21560 45d0c9134e0a112a1ccf187b38b040d1 97 Gene3D G3DSA:1.10.10.10 3 95 3.2E-4 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS15040 78cba1f9c1f989f65fa49ee79f2e80c7 580 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 429 531 4.4E-9 T 06-07-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AM402_RS15040 78cba1f9c1f989f65fa49ee79f2e80c7 580 Gene3D G3DSA:3.30.230.10 336 535 4.7E-32 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS15040 78cba1f9c1f989f65fa49ee79f2e80c7 580 SUPERFAMILY SSF54211 343 534 2.58E-34 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS15040 78cba1f9c1f989f65fa49ee79f2e80c7 580 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 426 445 3.4E-8 T 06-07-2017 AM402_RS15040 78cba1f9c1f989f65fa49ee79f2e80c7 580 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 456 475 3.4E-8 T 06-07-2017 AM402_RS15040 78cba1f9c1f989f65fa49ee79f2e80c7 580 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 486 504 3.4E-8 T 06-07-2017 AM402_RS15040 78cba1f9c1f989f65fa49ee79f2e80c7 580 Pfam PF13654 AAA domain 128 314 8.6E-23 T 06-07-2017 AM402_RS12480 ce3fe7c923cabb78250619469b087bea 427 Gene3D G3DSA:3.90.1150.10 290 427 1.7E-40 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS12480 ce3fe7c923cabb78250619469b087bea 427 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 233 247 - T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS12480 ce3fe7c923cabb78250619469b087bea 427 SUPERFAMILY SSF53383 71 425 5.49E-88 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS12480 ce3fe7c923cabb78250619469b087bea 427 PIRSF PIRSF001434 5 427 5.3E-116 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS12480 ce3fe7c923cabb78250619469b087bea 427 Gene3D G3DSA:3.40.640.10 18 289 2.3E-74 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS12480 ce3fe7c923cabb78250619469b087bea 427 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 424 1.7E-99 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS07900 4d5969191ece6fa9e7477e17eaf6ada3 203 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 5 141 1.1E-58 T 06-07-2017 IPR006521 Tail protein I AM402_RS07900 4d5969191ece6fa9e7477e17eaf6ada3 203 Pfam PF09684 Phage tail protein (Tail_P2_I) 5 140 5.3E-51 T 06-07-2017 IPR006521 Tail protein I AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 Gene3D G3DSA:3.30.1340.10 5 89 9.1E-26 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 Pfam PF00381 PTS HPr component phosphorylation site 5 84 2.2E-22 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 SUPERFAMILY SSF55594 4 90 1.44E-24 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 06-07-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 06-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 4.7E-9 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 4.7E-9 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 4.7E-9 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS19780 ab44e665baeaad0366a32c0cfd269aaa 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 5 84 5.4E-21 T 06-07-2017 IPR000032 Phosphocarrier protein HPr-like AM402_RS06260 dfe24216685d66492d25bb21be334a9c 185 SUPERFAMILY SSF55194 2 184 2.75E-72 T 06-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM402_RS06260 dfe24216685d66492d25bb21be334a9c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.0E-78 T 06-07-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM402_RS06260 dfe24216685d66492d25bb21be334a9c 185 Gene3D G3DSA:1.10.132.20 67 184 7.5E-45 T 06-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM402_RS06260 dfe24216685d66492d25bb21be334a9c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.963 T 06-07-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM402_RS06260 dfe24216685d66492d25bb21be334a9c 185 Pfam PF01765 Ribosome recycling factor 20 183 1.2E-62 T 06-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM402_RS01375 98abce0ef4e97eb1c95abda6754759d1 115 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 24 103 9.2E-9 T 06-07-2017 IPR019289 Bacteriophage tail protein Gp41, putative AM402_RS14555 00c8392ac5cf150968a44f990ef8c5e2 394 Pfam PF07690 Major Facilitator Superfamily 16 358 1.8E-49 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS14555 00c8392ac5cf150968a44f990ef8c5e2 394 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 386 5.8E-135 T 06-07-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM402_RS14555 00c8392ac5cf150968a44f990ef8c5e2 394 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 53 188 7.3E-39 T 06-07-2017 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 AM402_RS14555 00c8392ac5cf150968a44f990ef8c5e2 394 SUPERFAMILY SSF103473 6 393 4.45E-68 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS14555 00c8392ac5cf150968a44f990ef8c5e2 394 Gene3D G3DSA:1.20.1250.20 209 393 3.5E-11 T 06-07-2017 AM402_RS14555 00c8392ac5cf150968a44f990ef8c5e2 394 Gene3D G3DSA:1.20.1250.20 12 194 3.1E-33 T 06-07-2017 AM402_RS18835 fde0960016a3edc3ccc39260e57328b2 232 SUPERFAMILY SSF52402 1 215 1.21E-68 T 06-07-2017 AM402_RS18835 fde0960016a3edc3ccc39260e57328b2 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 207 4.4E-86 T 06-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM402_RS18835 fde0960016a3edc3ccc39260e57328b2 232 Gene3D G3DSA:3.40.50.620 1 218 9.7E-85 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS18835 fde0960016a3edc3ccc39260e57328b2 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 52.013 T 06-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM402_RS18835 fde0960016a3edc3ccc39260e57328b2 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 3.0E-84 T 06-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM402_RS18835 fde0960016a3edc3ccc39260e57328b2 232 PIRSF PIRSF006293 1 226 6.0E-86 T 06-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM402_RS19240 0c7fe52f616f741b2440c4605b5ecef3 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 06-07-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 AM402_RS19240 0c7fe52f616f741b2440c4605b5ecef3 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 4.0E-204 T 06-07-2017 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 AM402_RS19240 0c7fe52f616f741b2440c4605b5ecef3 567 SUPERFAMILY SSF56762 1 552 2.75E-162 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS19240 0c7fe52f616f741b2440c4605b5ecef3 567 Gene3D G3DSA:1.10.645.10 1 552 4.8E-202 T 06-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS19240 0c7fe52f616f741b2440c4605b5ecef3 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 06-07-2017 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 AM402_RS14545 4f44e0ad7010d05e659758d723ef1dd9 204 Pfam PF00877 NlpC/P60 family 80 184 3.8E-31 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS14545 4f44e0ad7010d05e659758d723ef1dd9 204 SUPERFAMILY SSF54001 68 187 2.94E-40 T 06-07-2017 AM402_RS14545 4f44e0ad7010d05e659758d723ef1dd9 204 Gene3D G3DSA:3.90.1720.10 69 189 1.4E-42 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS18310 bb326f977a36175c50596b80861fb53a 703 Pfam PF00593 TonB dependent receptor 467 701 2.9E-26 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS18310 bb326f977a36175c50596b80861fb53a 703 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 703 4.0E-98 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM402_RS18310 bb326f977a36175c50596b80861fb53a 703 Gene3D G3DSA:2.40.170.20 176 703 1.4E-95 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS18310 bb326f977a36175c50596b80861fb53a 703 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 158 4.7E-12 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS18310 bb326f977a36175c50596b80861fb53a 703 Gene3D G3DSA:2.170.130.10 51 171 4.0E-25 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS18310 bb326f977a36175c50596b80861fb53a 703 SUPERFAMILY SSF56935 24 703 1.14E-98 T 06-07-2017 AM402_RS18310 bb326f977a36175c50596b80861fb53a 703 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 686 703 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 Pfam PF03466 LysR substrate binding domain 87 288 2.2E-51 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 Gene3D G3DSA:3.40.190.10 174 259 1.6E-21 T 06-07-2017 AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 SUPERFAMILY SSF53850 89 289 4.13E-47 T 06-07-2017 AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.8E-17 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 Gene3D G3DSA:3.40.190.10 88 173 2.7E-18 T 06-07-2017 AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.1E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.1E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.1E-7 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 Gene3D G3DSA:1.10.10.10 2 82 5.1E-22 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14500 7438347990d05d56adf9dca71f2d6f62 296 SUPERFAMILY SSF46785 1 109 3.81E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 Gene3D G3DSA:3.50.50.60 4 117 4.6E-18 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 339 9.0E-63 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 SUPERFAMILY SSF51905 226 353 6.48E-29 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 SUPERFAMILY SSF51905 4 117 6.48E-29 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.1E-13 T 06-07-2017 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 4.1E-13 T 06-07-2017 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 4.1E-13 T 06-07-2017 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 4.1E-13 T 06-07-2017 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 Gene3D G3DSA:3.50.50.60 118 347 1.9E-33 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 2.8E-8 T 06-07-2017 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.8E-8 T 06-07-2017 AM402_RS14325 29e151329d7ca90187f1530a7c4890a9 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 2.8E-8 T 06-07-2017 AM402_RS04030 49ce3556a0d350216ad13a800bb74e63 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 06-07-2017 IPR020808 Bacterial microcompartments protein, conserved site AM402_RS04030 49ce3556a0d350216ad13a800bb74e63 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 49 9.0E-20 T 06-07-2017 AM402_RS04030 49ce3556a0d350216ad13a800bb74e63 92 SUPERFAMILY SSF143414 3 87 4.32E-31 T 06-07-2017 AM402_RS04030 49ce3556a0d350216ad13a800bb74e63 92 Pfam PF00936 BMC domain 4 79 3.0E-28 T 06-07-2017 IPR000249 Microcompartment protein, bacteria AM402_RS04030 49ce3556a0d350216ad13a800bb74e63 92 SMART SM00877 3 79 6.2E-35 T 06-07-2017 IPR000249 Microcompartment protein, bacteria AM402_RS12550 1bdd7f7992ae45be5711a651b0f4677f 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 308 1.3E-73 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS12550 1bdd7f7992ae45be5711a651b0f4677f 323 SUPERFAMILY SSF53686 8 316 7.6E-97 T 06-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM402_RS12550 1bdd7f7992ae45be5711a651b0f4677f 323 Gene3D G3DSA:3.40.50.1100 75 322 7.6E-71 T 06-07-2017 AM402_RS05695 fb19b2ba577fd6c7b293af77079e2555 338 Pfam PF01145 SPFH domain / Band 7 family 18 185 1.5E-9 T 06-07-2017 IPR001107 Band 7 domain AM402_RS05695 fb19b2ba577fd6c7b293af77079e2555 338 SUPERFAMILY SSF117892 56 181 1.57E-8 T 06-07-2017 IPR001107 Band 7 domain AM402_RS16285 8a849959e0482a298e049feecad80046 175 Gene3D G3DSA:3.40.50.360 1 168 1.2E-63 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS16285 8a849959e0482a298e049feecad80046 175 SUPERFAMILY SSF52218 4 170 2.3E-53 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS16285 8a849959e0482a298e049feecad80046 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 4.5E-76 T 06-07-2017 IPR010086 Flavodoxin, long chain GO:0010181 AM402_RS16285 8a849959e0482a298e049feecad80046 175 Pfam PF00258 Flavodoxin 6 160 7.6E-33 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM402_RS16285 8a849959e0482a298e049feecad80046 175 PIRSF PIRSF038996 1 172 3.3E-70 T 06-07-2017 IPR010086 Flavodoxin, long chain GO:0010181 AM402_RS16285 8a849959e0482a298e049feecad80046 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 06-07-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM402_RS05015 e2cb50a7ff3d17bb573cedcabd43094c 342 Pfam PF04055 Radical SAM superfamily 118 233 1.8E-8 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS05015 e2cb50a7ff3d17bb573cedcabd43094c 342 PIRSF PIRSF004911 1 341 8.0E-120 T 06-07-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AM402_RS05015 e2cb50a7ff3d17bb573cedcabd43094c 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 8.3E-133 T 06-07-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AM402_RS05015 e2cb50a7ff3d17bb573cedcabd43094c 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 334 3.6E-160 T 06-07-2017 IPR022462 Lysine-2,3-aminomutase-like AM402_RS05015 e2cb50a7ff3d17bb573cedcabd43094c 342 Gene3D G3DSA:3.20.20.70 105 318 6.9E-18 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS05015 e2cb50a7ff3d17bb573cedcabd43094c 342 SUPERFAMILY SSF102114 102 322 3.4E-28 T 06-07-2017 AM402_RS05015 e2cb50a7ff3d17bb573cedcabd43094c 342 Pfam PF13353 4Fe-4S single cluster domain 111 179 1.7E-7 T 06-07-2017 AM402_RS16710 52b9ba33715c9e02defc390a0d53d86a 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 8.9E-21 T 06-07-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AM402_RS00500 1af7caf04367f7c1991d90f030cf381d 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 5.0E-11 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS00500 1af7caf04367f7c1991d90f030cf381d 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 1.3E-23 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS00500 1af7caf04367f7c1991d90f030cf381d 402 Pfam PF01385 Probable transposase 163 275 5.6E-29 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS00500 1af7caf04367f7c1991d90f030cf381d 402 Pfam PF12323 Helix-turn-helix domain 1 48 8.3E-16 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS05370 4f010451ee6fc69b7f7a41c635c6e013 263 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 1 97 1.5E-34 T 06-07-2017 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain AM402_RS05370 4f010451ee6fc69b7f7a41c635c6e013 263 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 99 250 9.4E-54 T 06-07-2017 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 252 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 SMART SM00342 174 256 1.2E-22 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.0E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.0E-5 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 SUPERFAMILY SSF51182 25 190 2.37E-11 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 Gene3D G3DSA:1.10.10.60 211 257 1.9E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 Gene3D G3DSA:1.10.10.60 154 210 5.2E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 SUPERFAMILY SSF46689 210 257 1.79E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 Gene3D G3DSA:2.60.120.10 5 91 2.2E-12 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 Pfam PF07883 Cupin domain 31 90 1.8E-6 T 06-07-2017 IPR013096 Cupin 2, conserved barrel AM402_RS08955 3d8405cf2430eacc614b937ca791b6e3 261 Pfam PF12833 Helix-turn-helix domain 180 257 4.8E-23 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS11320 23af6e5c375efb25b7159bc7ae8f9b7c 384 Gene3D G3DSA:3.40.50.150 117 371 1.5E-92 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS11320 23af6e5c375efb25b7159bc7ae8f9b7c 384 SUPERFAMILY SSF53335 118 371 2.25E-76 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS11320 23af6e5c375efb25b7159bc7ae8f9b7c 384 PIRSF PIRSF003085 3 379 8.0E-124 T 06-07-2017 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AM402_RS11320 23af6e5c375efb25b7159bc7ae8f9b7c 384 Pfam PF02353 Mycolic acid cyclopropane synthetase 110 369 3.3E-99 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS10725 7d153c6ff91da35a13da1e74cff4cebb 408 Gene3D G3DSA:1.20.1250.20 215 394 1.0E-12 T 06-07-2017 AM402_RS10725 7d153c6ff91da35a13da1e74cff4cebb 408 SUPERFAMILY SSF103473 11 393 2.62E-54 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS10725 7d153c6ff91da35a13da1e74cff4cebb 408 Gene3D G3DSA:1.20.1250.20 15 201 9.6E-26 T 06-07-2017 AM402_RS10725 7d153c6ff91da35a13da1e74cff4cebb 408 Pfam PF07690 Major Facilitator Superfamily 25 334 1.9E-32 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS05925 c494964e3f9b19a7a16b4c39b60b74da 387 SUPERFAMILY SSF56059 2 168 1.09E-91 T 06-07-2017 AM402_RS05925 c494964e3f9b19a7a16b4c39b60b74da 387 SUPERFAMILY SSF56059 266 384 1.09E-91 T 06-07-2017 AM402_RS05925 c494964e3f9b19a7a16b4c39b60b74da 387 SUPERFAMILY SSF52440 174 279 7.77E-39 T 06-07-2017 IPR016185 Pre-ATP-grasp domain AM402_RS05925 c494964e3f9b19a7a16b4c39b60b74da 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 385 1.3E-164 T 06-07-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AM402_RS15145 9c8db7614907a67a9df54724090a936e 239 Gene3D G3DSA:1.20.5.950 103 138 3.3E-4 T 06-07-2017 AM402_RS15350 c9de38fccdbc903415b55cf2452dded9 237 SUPERFAMILY SSF56784 31 237 7.33E-70 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15350 c9de38fccdbc903415b55cf2452dded9 237 Gene3D G3DSA:3.40.50.1000 32 236 1.2E-71 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15350 c9de38fccdbc903415b55cf2452dded9 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 43 220 1.2E-34 T 06-07-2017 IPR005519 Acid phosphatase, class B-like AM402_RS15350 c9de38fccdbc903415b55cf2452dded9 237 PIRSF PIRSF017818 1 237 4.9E-116 T 06-07-2017 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AM402_RS15350 c9de38fccdbc903415b55cf2452dded9 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 1.1E-99 T 06-07-2017 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AM402_RS05420 5bd3ac44b20e2d17821dbb399657af5f 258 Pfam PF13483 Beta-lactamase superfamily domain 3 220 3.3E-10 T 06-07-2017 AM402_RS05420 5bd3ac44b20e2d17821dbb399657af5f 258 SUPERFAMILY SSF56281 1 258 1.57E-18 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS05420 5bd3ac44b20e2d17821dbb399657af5f 258 Gene3D G3DSA:3.60.15.10 1 258 7.0E-28 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS08380 bf2a34636c3381b19437e4b33c85c86b 252 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 14 252 55.376 T 06-07-2017 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 AM402_RS08380 bf2a34636c3381b19437e4b33c85c86b 252 Gene3D G3DSA:3.40.50.150 35 244 1.1E-44 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS08380 bf2a34636c3381b19437e4b33c85c86b 252 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS08380 bf2a34636c3381b19437e4b33c85c86b 252 SUPERFAMILY SSF53335 15 193 3.16E-30 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS08380 bf2a34636c3381b19437e4b33c85c86b 252 Pfam PF05175 Methyltransferase small domain 47 132 2.3E-16 T 06-07-2017 IPR007848 Methyltransferase small domain GO:0008168 AM402_RS00475 1107fda6d2e4fae111c294dcb7c8bb88 173 SUPERFAMILY SSF49401 28 173 3.58E-34 T 06-07-2017 IPR008966 Adhesion domain AM402_RS00475 1107fda6d2e4fae111c294dcb7c8bb88 173 Gene3D G3DSA:2.60.40.1090 27 173 1.9E-38 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00475 1107fda6d2e4fae111c294dcb7c8bb88 173 Pfam PF00419 Fimbrial protein 29 173 4.6E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 4.2E-12 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 Gene3D G3DSA:1.10.1060.10 516 619 1.7E-15 T 06-07-2017 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 Gene3D G3DSA:1.10.1060.10 656 707 1.7E-15 T 06-07-2017 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 SUPERFAMILY SSF56176 245 282 6.91E-52 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 SUPERFAMILY SSF56176 15 192 6.91E-52 T 06-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 Gene3D G3DSA:3.30.465.10 110 282 1.4E-41 T 06-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 Gene3D G3DSA:3.30.43.10 1 109 1.0E-26 T 06-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 5.8E-65 T 06-07-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 SUPERFAMILY SSF46548 655 692 9.24E-9 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 SUPERFAMILY SSF46548 516 622 9.24E-9 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 Pfam PF01565 FAD binding domain 52 192 1.7E-35 T 06-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM402_RS11225 e7d7912c6e34190fc696c6e47fe507c5 1018 SUPERFAMILY SSF55103 257 543 1.8E-54 T 06-07-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM402_RS15795 c28e5fbc2b8cc5a7446d172e8a3d2d0e 255 Pfam PF00899 ThiF family 13 245 4.9E-63 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM402_RS15795 c28e5fbc2b8cc5a7446d172e8a3d2d0e 255 Gene3D G3DSA:3.40.50.720 4 249 1.8E-77 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15795 c28e5fbc2b8cc5a7446d172e8a3d2d0e 255 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 1.0E-126 T 06-07-2017 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AM402_RS15795 c28e5fbc2b8cc5a7446d172e8a3d2d0e 255 SUPERFAMILY SSF69572 4 248 3.92E-88 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM402_RS03105 ef09c040e52308b0631e0c1ac0afb22c 405 Gene3D G3DSA:3.40.47.10 259 372 1.0E-13 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03105 ef09c040e52308b0631e0c1ac0afb22c 405 Gene3D G3DSA:3.40.47.10 2 237 2.7E-15 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03105 ef09c040e52308b0631e0c1ac0afb22c 405 SUPERFAMILY SSF53901 2 234 1.06E-14 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03105 ef09c040e52308b0631e0c1ac0afb22c 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 70 234 4.5E-9 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AM402_RS03105 ef09c040e52308b0631e0c1ac0afb22c 405 SUPERFAMILY SSF53901 209 398 2.5E-22 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03105 ef09c040e52308b0631e0c1ac0afb22c 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 355 7.3E-12 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal AM402_RS09540 76ed6bc6760a695ccc242fa4d1873018 200 SUPERFAMILY SSF52172 2 55 3.89E-5 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS09540 76ed6bc6760a695ccc242fa4d1873018 200 SMART SM00421 134 191 2.0E-5 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09540 76ed6bc6760a695ccc242fa4d1873018 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 187 1.3E-12 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS09540 76ed6bc6760a695ccc242fa4d1873018 200 Gene3D G3DSA:1.10.10.10 138 190 2.0E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS09540 76ed6bc6760a695ccc242fa4d1873018 200 SUPERFAMILY SSF46894 129 195 5.44E-13 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS09540 76ed6bc6760a695ccc242fa4d1873018 200 Gene3D G3DSA:3.40.50.2300 2 54 3.4E-4 T 06-07-2017 AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 SUPERFAMILY SSF52540 190 506 5.3E-47 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 393 5.8E-84 T 06-07-2017 IPR000523 Magnesium chelatase ChlI domain AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 SMART SM00382 212 392 1.0E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 SUPERFAMILY SSF54211 9 168 8.34E-26 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 136 1.4E-41 T 06-07-2017 AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 Gene3D G3DSA:3.40.50.300 191 388 1.7E-46 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 Gene3D G3DSA:3.30.230.10 5 167 1.2E-23 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 495 6.8E-29 T 06-07-2017 IPR025158 Mg chelatase-related protein, C-terminal domain AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 291 305 8.2E-6 T 06-07-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 319 332 8.2E-6 T 06-07-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 211 226 8.2E-6 T 06-07-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AM402_RS00760 38c4f125742df67c9bd020cd78552457 510 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 495 7.5E-203 T 06-07-2017 IPR004482 Mg chelatase-related protein AM402_RS15320 7001a4828bdf6cad3daf8f1460a94ae3 451 Pfam PF12486 Type VI secretion system, EvfB, or VasL 284 430 3.6E-54 T 06-07-2017 IPR021069 ImpA, C-terminal AM402_RS15320 7001a4828bdf6cad3daf8f1460a94ae3 451 Pfam PF06812 ImpA, N-terminal, type VI secretion system 15 115 8.3E-19 T 06-07-2017 IPR010657 ImpA, N-terminal AM402_RS17635 6d7f1234833890c7e93c932fbf079205 715 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 653 1.2E-263 T 06-07-2017 IPR022458 Conjugative coupling factor TraG/TraD AM402_RS17635 6d7f1234833890c7e93c932fbf079205 715 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 653 0.0 T 06-07-2017 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 AM402_RS17635 6d7f1234833890c7e93c932fbf079205 715 Pfam PF12696 TraM recognition site of TraD and TraG 504 633 7.4E-12 T 06-07-2017 IPR032689 TraD/TraG, TraM recognition site AM402_RS17635 6d7f1234833890c7e93c932fbf079205 715 SUPERFAMILY SSF52540 143 343 1.36E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17635 6d7f1234833890c7e93c932fbf079205 715 SUPERFAMILY SSF52540 395 651 1.36E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17635 6d7f1234833890c7e93c932fbf079205 715 Gene3D G3DSA:3.40.50.300 158 259 1.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17635 6d7f1234833890c7e93c932fbf079205 715 Gene3D G3DSA:3.40.50.300 441 657 1.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04040 da283e445ec0756e759f71595b1f25c5 87 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 57 4.0E-5 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM402_RS04040 da283e445ec0756e759f71595b1f25c5 87 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 62 2.8E-17 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM402_RS04040 da283e445ec0756e759f71595b1f25c5 87 SUPERFAMILY SSF159133 1 85 3.14E-18 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM402_RS04040 da283e445ec0756e759f71595b1f25c5 87 Gene3D G3DSA:2.40.50.220 1 85 1.8E-20 T 06-07-2017 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml AM402_RS18540 a8e377ce81f4d6db4617c8ebf3246b6d 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 12 445 1.6E-159 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM402_RS18540 a8e377ce81f4d6db4617c8ebf3246b6d 445 Pfam PF02447 GntP family permease 8 444 3.4E-153 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM402_RS18540 a8e377ce81f4d6db4617c8ebf3246b6d 445 PIRSF PIRSF002746 3 445 5.7E-139 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM402_RS10905 6b3b11c1b745ea6226ac400bb3f1633b 278 SUPERFAMILY SSF52540 6 237 2.43E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10905 6b3b11c1b745ea6226ac400bb3f1633b 278 SMART SM00382 30 227 5.6E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS10905 6b3b11c1b745ea6226ac400bb3f1633b 278 Gene3D G3DSA:3.40.50.300 5 248 2.0E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10905 6b3b11c1b745ea6226ac400bb3f1633b 278 Pfam PF00005 ABC transporter 23 178 6.5E-23 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS05930 8c4a60298286687f642df78cc16b254f 242 Pfam PF06693 Protein of unknown function (DUF1190) 43 219 7.1E-54 T 06-07-2017 IPR009576 Biofilm formation YgiB AM402_RS07665 5fee28059bdc13a93c36627197b0af69 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 174 1.3E-35 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 AM402_RS07665 5fee28059bdc13a93c36627197b0af69 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 17 163 2.5E-11 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 AM402_RS07665 5fee28059bdc13a93c36627197b0af69 194 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 188 30.087 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 AM402_RS07665 5fee28059bdc13a93c36627197b0af69 194 SUPERFAMILY SSF101327 7 174 8.24E-46 T 06-07-2017 IPR011978 Uncharacterised protein family UPF0149 AM402_RS05185 0eadbb653955a75b0e2f2d1707d91a2e 141 Gene3D G3DSA:2.10.270.10 23 135 9.2E-9 T 06-07-2017 AM402_RS05185 0eadbb653955a75b0e2f2d1707d91a2e 141 SUPERFAMILY SSF69360 11 135 3.04E-10 T 06-07-2017 AM402_RS17245 3b2db5b427eeca7170d6803b2b06f1df 261 PIRSF PIRSF009437 2 260 5.1E-95 T 06-07-2017 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM402_RS17245 3b2db5b427eeca7170d6803b2b06f1df 261 Pfam PF04205 FMN-binding domain 148 242 1.5E-13 T 06-07-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 AM402_RS17245 3b2db5b427eeca7170d6803b2b06f1df 261 SMART SM00900 148 245 2.8E-26 T 06-07-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 AM402_RS17245 3b2db5b427eeca7170d6803b2b06f1df 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 8 257 35.076 T 06-07-2017 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM402_RS17245 3b2db5b427eeca7170d6803b2b06f1df 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 7 253 2.9E-87 T 06-07-2017 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM402_RS12735 0a94e01ab0ec804052eb186ab78117ca 290 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 257 4.2E-19 T 06-07-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 Pfam PF12833 Helix-turn-helix domain 30 108 4.3E-24 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 SMART SM00342 24 107 6.9E-28 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 Gene3D G3DSA:1.10.10.60 3 60 1.3E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 Gene3D G3DSA:1.10.10.60 61 111 5.7E-20 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 06-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 SUPERFAMILY SSF46689 10 59 8.33E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 SUPERFAMILY SSF46689 60 110 1.39E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 2.0E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS10000 71e5f12ff71edf68075e867b128f8f18 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 2.0E-7 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS18710 e3a7cf1a4dabcddadbbe39f7a1372a05 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 59 444 1.4E-112 T 06-07-2017 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AM402_RS18710 e3a7cf1a4dabcddadbbe39f7a1372a05 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 5 453 2.8E-84 T 06-07-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM402_RS06275 eb28d7b43e5ec3dc4178676eced9a3a6 287 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 06-07-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 AM402_RS06275 eb28d7b43e5ec3dc4178676eced9a3a6 287 Pfam PF01148 Cytidylyltransferase family 4 278 1.0E-63 T 06-07-2017 AM402_RS07660 edbf4dec9ad057673f9345d81ffb8e7e 109 SUPERFAMILY SSF102829 6 95 3.79E-22 T 06-07-2017 IPR007838 Cell division protein ZapA-like AM402_RS07660 edbf4dec9ad057673f9345d81ffb8e7e 109 Pfam PF05164 Cell division protein ZapA 6 90 9.1E-17 T 06-07-2017 IPR007838 Cell division protein ZapA-like AM402_RS00175 8daed2459aed9f4f0a62d34feba3d62c 209 PIRSF PIRSF005461 1 209 1.6E-83 T 06-07-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AM402_RS00175 8daed2459aed9f4f0a62d34feba3d62c 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 28.677 T 06-07-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AM402_RS00175 8daed2459aed9f4f0a62d34feba3d62c 209 Gene3D G3DSA:3.40.50.150 1 208 1.4E-74 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS00175 8daed2459aed9f4f0a62d34feba3d62c 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 9.8E-60 T 06-07-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM402_RS00175 8daed2459aed9f4f0a62d34feba3d62c 209 SUPERFAMILY SSF53335 30 207 2.92E-45 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS00175 8daed2459aed9f4f0a62d34feba3d62c 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 2.5E-94 T 06-07-2017 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 AM402_RS21725 f532f76f7108edd0cf1bd9d6ca174a0f 90 Pfam PF13693 Winged helix-turn-helix DNA-binding 19 83 9.1E-16 T 06-07-2017 AM402_RS21725 f532f76f7108edd0cf1bd9d6ca174a0f 90 Gene3D G3DSA:1.10.260.40 12 79 1.3E-22 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS21725 f532f76f7108edd0cf1bd9d6ca174a0f 90 SUPERFAMILY SSF47413 11 78 1.01E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 448 1.6E-124 T 06-07-2017 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 Gene3D G3DSA:3.60.120.10 27 456 1.8E-149 T 06-07-2017 IPR005801 ADC synthase GO:0009058 AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 PRINTS PR00095 Anthranilate synthase component I signature 404 418 6.2E-16 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 PRINTS PR00095 Anthranilate synthase component I signature 389 403 6.2E-16 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 PRINTS PR00095 Anthranilate synthase component I signature 309 322 6.2E-16 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 PRINTS PR00095 Anthranilate synthase component I signature 295 308 6.2E-16 T 06-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 SUPERFAMILY SSF56322 6 455 2.49E-142 T 06-07-2017 IPR005801 ADC synthase GO:0009058 AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 Pfam PF00425 chorismate binding enzyme 194 447 2.0E-93 T 06-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal AM402_RS09960 c08cbd05e738d0854c422beb87671504 464 Pfam PF04715 Anthranilate synthase component I, N terminal region 18 154 9.1E-25 T 06-07-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS09400 cab75ffc7588a48771676c44b5c2793b 117 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 4 117 6.0E-19 T 06-07-2017 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly AM402_RS01205 4082c5642b6a2778600cd92f15c06041 172 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.0E-33 T 06-07-2017 IPR005134 Uncharacterised protein family UPF0114 AM402_RS01205 4082c5642b6a2778600cd92f15c06041 172 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 166 79.923 T 06-07-2017 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 AM402_RS01205 4082c5642b6a2778600cd92f15c06041 172 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 164 1.2E-66 T 06-07-2017 IPR020761 Uncharacterised protein family UPF0114, bacteria AM402_RS05730 f7736e681028a0db5fc16f4f4e57af78 381 Gene3D G3DSA:3.40.50.2020 66 122 3.3E-5 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS05730 f7736e681028a0db5fc16f4f4e57af78 381 PIRSF PIRSF020967 1 381 3.2E-181 T 06-07-2017 IPR011214 Uncharacterised conserved protein UCP020967 AM402_RS05730 f7736e681028a0db5fc16f4f4e57af78 381 SUPERFAMILY SSF53271 32 212 5.25E-15 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS05730 f7736e681028a0db5fc16f4f4e57af78 381 Pfam PF12500 TRSP domain C terminus to PRTase_2 273 364 1.3E-22 T 06-07-2017 IPR022537 TRSP domain AM402_RS05730 f7736e681028a0db5fc16f4f4e57af78 381 Pfam PF15609 Phosphoribosyl transferase 33 221 1.8E-64 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS05730 f7736e681028a0db5fc16f4f4e57af78 381 Gene3D G3DSA:3.40.50.2020 151 212 1.9E-4 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 Gene3D G3DSA:2.40.50.140 1 123 1.0E-64 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.67 T 06-07-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 Pfam PF00164 Ribosomal protein S12/S23 6 123 8.5E-43 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.0E-70 T 06-07-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.6E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.6E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.6E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.6E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.6E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.6E-60 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 PIRSF PIRSF002133 1 124 1.5E-53 T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 06-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03630 68d9df16029cc9cdc795b51001dcfdbd 124 SUPERFAMILY SSF50249 3 123 1.8E-51 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 Gene3D G3DSA:3.40.50.300 3 222 8.6E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 Gene3D G3DSA:3.40.1390.20 224 364 5.2E-31 T 06-07-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 SUPERFAMILY SSF53659 391 708 4.52E-95 T 06-07-2017 AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 SUPERFAMILY SSF52540 3 239 5.84E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 SUPERFAMILY SSF75138 228 352 2.22E-25 T 06-07-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 PIRSF PIRSF006107 1 713 0.0 T 06-07-2017 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 Pfam PF13500 AAA domain 3 228 9.2E-48 T 06-07-2017 AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 Gene3D G3DSA:3.40.50.10750 523 681 5.8E-68 T 06-07-2017 AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 Pfam PF07085 DRTGG domain 232 343 2.6E-28 T 06-07-2017 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 705 2.5E-127 T 06-07-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM402_RS09065 3c0a22fcec869d293fe933e3c88f0ec9 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 705 2.5E-136 T 06-07-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM402_RS04655 0ba37c2f1f278eb97634298e238613be 249 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 117 223 5.4E-16 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS04655 0ba37c2f1f278eb97634298e238613be 249 SUPERFAMILY SSF56214 117 237 2.49E-23 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS04655 0ba37c2f1f278eb97634298e238613be 249 Gene3D G3DSA:3.90.470.20 13 129 1.4E-28 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS04655 0ba37c2f1f278eb97634298e238613be 249 Gene3D G3DSA:3.90.470.20 130 197 4.3E-17 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS04655 0ba37c2f1f278eb97634298e238613be 249 SUPERFAMILY SSF56214 12 109 3.24E-24 T 06-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM402_RS09650 b6d9b3495ca96273ff7771c4b56f5edb 218 Gene3D G3DSA:1.20.5.590 5 35 3.1E-14 T 06-07-2017 AM402_RS09650 b6d9b3495ca96273ff7771c4b56f5edb 218 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 218 9.1E-78 T 06-07-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AM402_RS09650 b6d9b3495ca96273ff7771c4b56f5edb 218 SUPERFAMILY SSF75708 13 217 9.81E-66 T 06-07-2017 AM402_RS09650 b6d9b3495ca96273ff7771c4b56f5edb 218 Gene3D G3DSA:1.10.287.500 36 169 1.3E-54 T 06-07-2017 AM402_RS09650 b6d9b3495ca96273ff7771c4b56f5edb 218 PIRSF PIRSF002884 6 218 3.7E-82 T 06-07-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AM402_RS17070 fa6c806bc17f930327814daf3033829b 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 118.721 T 06-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM402_RS17070 fa6c806bc17f930327814daf3033829b 250 Gene3D G3DSA:1.10.1270.20 161 246 9.1E-36 T 06-07-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM402_RS17070 fa6c806bc17f930327814daf3033829b 250 SUPERFAMILY SSF75217 1 244 9.81E-103 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases AM402_RS17070 fa6c806bc17f930327814daf3033829b 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.6E-71 T 06-07-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM402_RS17070 fa6c806bc17f930327814daf3033829b 250 PIRSF PIRSF000386 1 250 3.8E-103 T 06-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM402_RS17070 fa6c806bc17f930327814daf3033829b 250 Gene3D G3DSA:3.40.1280.10 1 160 1.7E-68 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM402_RS17070 fa6c806bc17f930327814daf3033829b 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 9.9E-109 T 06-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM402_RS06695 e482bd186397a7b6c0652b11ecb044c9 226 SMART SM00563 41 176 1.1E-11 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM402_RS06695 e482bd186397a7b6c0652b11ecb044c9 226 Gene3D G3DSA:3.40.1130.10 34 210 1.4E-16 T 06-07-2017 AM402_RS06695 e482bd186397a7b6c0652b11ecb044c9 226 SUPERFAMILY SSF69593 14 216 3.79E-30 T 06-07-2017 AM402_RS06695 e482bd186397a7b6c0652b11ecb044c9 226 Pfam PF01553 Acyltransferase 30 172 2.4E-13 T 06-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM402_RS16765 0307054d331deea5e3d3e5a7b31e19b1 243 ProSitePatterns PS00194 Thioredoxin family active site. 95 113 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AM402_RS16765 0307054d331deea5e3d3e5a7b31e19b1 243 Pfam PF13462 Thioredoxin 83 235 3.0E-23 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS16765 0307054d331deea5e3d3e5a7b31e19b1 243 SUPERFAMILY SSF52833 72 235 5.9E-38 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS16765 0307054d331deea5e3d3e5a7b31e19b1 243 Gene3D G3DSA:3.40.30.10 73 239 2.9E-37 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS20260 aabe106d3a4658ac4f426159808c299c 206 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 6.0E-26 T 06-07-2017 IPR001498 Impact, N-terminal AM402_RS20260 aabe106d3a4658ac4f426159808c299c 206 SUPERFAMILY SSF54211 2 131 2.77E-42 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS20260 aabe106d3a4658ac4f426159808c299c 206 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 06-07-2017 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AM402_RS20260 aabe106d3a4658ac4f426159808c299c 206 SUPERFAMILY SSF54980 137 202 1.64E-13 T 06-07-2017 IPR009022 Elongation factor G, III-V domain AM402_RS20260 aabe106d3a4658ac4f426159808c299c 206 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 3.3E-13 T 06-07-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AM402_RS20260 aabe106d3a4658ac4f426159808c299c 206 Gene3D G3DSA:3.30.70.240 135 203 5.7E-21 T 06-07-2017 IPR000640 Translation elongation factor EFG, V domain AM402_RS20260 aabe106d3a4658ac4f426159808c299c 206 Gene3D G3DSA:3.30.230.30 4 130 7.8E-43 T 06-07-2017 IPR001498 Impact, N-terminal AM402_RS20260 aabe106d3a4658ac4f426159808c299c 206 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 201 1.2E-73 T 06-07-2017 IPR015796 Impact family, bacterial/archaeal AM402_RS03170 9fa2a3786948e439b063515a40f0346e 319 SUPERFAMILY SSF161098 29 304 1.03E-33 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03170 9fa2a3786948e439b063515a40f0346e 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 307 4.1E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03170 9fa2a3786948e439b063515a40f0346e 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 9.6E-96 T 06-07-2017 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AM402_RS03170 9fa2a3786948e439b063515a40f0346e 319 Gene3D G3DSA:1.10.3720.10 25 316 8.1E-38 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS19230 bdcd56c6bd1ea8bad79b9f5797a702f8 164 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 19 159 7.8E-53 T 06-07-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AM402_RS19230 bdcd56c6bd1ea8bad79b9f5797a702f8 164 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 19 158 1.0E-38 T 06-07-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AM402_RS19230 bdcd56c6bd1ea8bad79b9f5797a702f8 164 Pfam PF11939 Protein of unknown function (DUF3457) 16 160 3.2E-45 T 06-07-2017 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE AM402_RS03915 7d0a59984dc3df2e929e4bb894d695b0 397 Gene3D G3DSA:3.40.640.10 47 316 1.4E-100 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS03915 7d0a59984dc3df2e929e4bb894d695b0 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.3E-80 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS03915 7d0a59984dc3df2e929e4bb894d695b0 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 06-07-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM402_RS03915 7d0a59984dc3df2e929e4bb894d695b0 397 SUPERFAMILY SSF53383 2 390 7.6E-114 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS03915 7d0a59984dc3df2e929e4bb894d695b0 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.6E-32 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM402_RS03915 7d0a59984dc3df2e929e4bb894d695b0 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.6E-32 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM402_RS03915 7d0a59984dc3df2e929e4bb894d695b0 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.6E-32 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM402_RS03915 7d0a59984dc3df2e929e4bb894d695b0 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.6E-32 T 06-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM402_RS00030 768b56792463073282e604a5e86109a8 232 PRINTS PR00969 Pili chaperone signature 30 39 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00030 768b56792463073282e604a5e86109a8 232 PRINTS PR00969 Pili chaperone signature 129 144 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00030 768b56792463073282e604a5e86109a8 232 PRINTS PR00969 Pili chaperone signature 164 179 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00030 768b56792463073282e604a5e86109a8 232 PRINTS PR00969 Pili chaperone signature 103 120 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00030 768b56792463073282e604a5e86109a8 232 PRINTS PR00969 Pili chaperone signature 74 95 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS00030 768b56792463073282e604a5e86109a8 232 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 147 2.6E-37 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS00030 768b56792463073282e604a5e86109a8 232 Gene3D G3DSA:2.60.40.360 30 145 2.1E-42 T 06-07-2017 IPR008962 PapD-like AM402_RS00030 768b56792463073282e604a5e86109a8 232 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 102 119 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS00030 768b56792463073282e604a5e86109a8 232 SUPERFAMILY SSF49354 30 147 2.88E-37 T 06-07-2017 IPR008962 PapD-like AM402_RS00030 768b56792463073282e604a5e86109a8 232 SUPERFAMILY SSF49584 142 227 3.01E-24 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS00030 768b56792463073282e604a5e86109a8 232 Gene3D G3DSA:2.60.40.1070 150 227 1.1E-27 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS00030 768b56792463073282e604a5e86109a8 232 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 224 4.1E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS06225 86806b7ad6aeed08efe84690ab2d128e 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 6.8E-56 T 06-07-2017 IPR020911 Uncharacterised protein family UPF0325 AM402_RS06225 86806b7ad6aeed08efe84690ab2d128e 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 31.088 T 06-07-2017 IPR020911 Uncharacterised protein family UPF0325 AM402_RS06225 86806b7ad6aeed08efe84690ab2d128e 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 8.0E-60 T 06-07-2017 IPR020911 Uncharacterised protein family UPF0325 AM402_RS09785 9d15511627926a73b4616d94be47cca6 470 PRINTS PR01007 Flagellar hook-length control protein signature 366 381 2.8E-6 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM402_RS09785 9d15511627926a73b4616d94be47cca6 470 PRINTS PR01007 Flagellar hook-length control protein signature 30 43 2.8E-6 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM402_RS09785 9d15511627926a73b4616d94be47cca6 470 PRINTS PR01007 Flagellar hook-length control protein signature 381 404 2.8E-6 T 06-07-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 AM402_RS09785 9d15511627926a73b4616d94be47cca6 470 Pfam PF02120 Flagellar hook-length control protein FliK 333 412 1.4E-21 T 06-07-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal AM402_RS17200 d95990e98cf23beb872cc37b7263ea4a 720 Gene3D G3DSA:2.170.130.10 28 179 8.6E-34 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS17200 d95990e98cf23beb872cc37b7263ea4a 720 SUPERFAMILY SSF56935 32 720 3.21E-124 T 06-07-2017 AM402_RS17200 d95990e98cf23beb872cc37b7263ea4a 720 Pfam PF00593 TonB dependent receptor 479 719 2.9E-26 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS17200 d95990e98cf23beb872cc37b7263ea4a 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 719 4.4E-122 T 06-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM402_RS17200 d95990e98cf23beb872cc37b7263ea4a 720 Gene3D G3DSA:2.40.170.20 184 720 1.2E-144 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS17200 d95990e98cf23beb872cc37b7263ea4a 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 168 1.3E-21 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS15370 0e2b1ff1e04c69923be93e10a026a660 440 Pfam PF03882 MukF winged-helix domain 3 117 1.9E-55 T 06-07-2017 IPR033439 Chromosome partition protein MukF, winged-helix domain AM402_RS15370 0e2b1ff1e04c69923be93e10a026a660 440 Gene3D G3DSA:1.10.10.10 24 118 1.4E-46 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS15370 0e2b1ff1e04c69923be93e10a026a660 440 Pfam PF17193 MukF C-terminal domain 283 440 4.2E-75 T 06-07-2017 IPR033441 Chromosome partition protein MukF, C-terminal domain AM402_RS15370 0e2b1ff1e04c69923be93e10a026a660 440 Pfam PF17192 MukF middle domain 121 281 1.4E-81 T 06-07-2017 IPR033440 Chromosome partition protein MukF, middle domain AM402_RS15370 0e2b1ff1e04c69923be93e10a026a660 440 SUPERFAMILY SSF46785 8 118 8.3E-48 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS15370 0e2b1ff1e04c69923be93e10a026a660 440 SUPERFAMILY SSF140570 119 281 3.79E-73 T 06-07-2017 IPR033440 Chromosome partition protein MukF, middle domain AM402_RS08530 6d69dc34300d413d4103fe22a84c0d5b 417 Gene3D G3DSA:3.40.640.10 37 285 3.3E-107 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS08530 6d69dc34300d413d4103fe22a84c0d5b 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.115 T 06-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM402_RS08530 6d69dc34300d413d4103fe22a84c0d5b 417 PIRSF PIRSF000412 1 417 3.2E-172 T 06-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM402_RS08530 6d69dc34300d413d4103fe22a84c0d5b 417 Gene3D G3DSA:3.90.1150.10 286 416 6.8E-56 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS08530 6d69dc34300d413d4103fe22a84c0d5b 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 2.4E-186 T 06-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM402_RS08530 6d69dc34300d413d4103fe22a84c0d5b 417 SUPERFAMILY SSF53383 6 416 7.29E-184 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS08530 6d69dc34300d413d4103fe22a84c0d5b 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 06-07-2017 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM402_RS11515 2ef493ba11c4ba6a00ca646335440d1a 213 Gene3D G3DSA:1.10.10.60 10 62 3.9E-4 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS11515 2ef493ba11c4ba6a00ca646335440d1a 213 Pfam PF05766 Bacteriophage Lambda NinG protein 2 207 3.1E-60 T 06-07-2017 IPR008713 Bacteriophage lambda NinG AM402_RS04465 ea9ed93a1af26129e6dcc29dc35bb31f 198 SUPERFAMILY SSF140478 27 183 5.75E-47 T 06-07-2017 IPR023353 LemA-like domain AM402_RS04465 ea9ed93a1af26129e6dcc29dc35bb31f 198 Pfam PF04011 LemA family 10 195 1.3E-57 T 06-07-2017 IPR007156 LemA AM402_RS04465 ea9ed93a1af26129e6dcc29dc35bb31f 198 Gene3D G3DSA:1.20.1440.20 15 194 1.3E-54 T 06-07-2017 IPR023353 LemA-like domain AM402_RS00210 d4f5c77753f7ea8888c704588ab87a32 323 SUPERFAMILY SSF48576 5 322 3.6E-99 T 06-07-2017 IPR008949 Isoprenoid synthase domain AM402_RS00210 d4f5c77753f7ea8888c704588ab87a32 323 Gene3D G3DSA:1.10.600.10 4 322 5.2E-101 T 06-07-2017 IPR008949 Isoprenoid synthase domain AM402_RS00210 d4f5c77753f7ea8888c704588ab87a32 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AM402_RS00210 d4f5c77753f7ea8888c704588ab87a32 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AM402_RS00210 d4f5c77753f7ea8888c704588ab87a32 323 Pfam PF00348 Polyprenyl synthetase 31 263 6.2E-74 T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AM402_RS01265 6a8836056395b7a7df7445c54374a002 80 Pfam PF06005 Protein of unknown function (DUF904) 1 77 2.9E-27 T 06-07-2017 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 AM402_RS01265 6a8836056395b7a7df7445c54374a002 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.112 T 06-07-2017 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 AM402_RS08065 e5f555f294bcaebdba3c97ed6d6cd7ad 85 Pfam PF06183 DinI-like family 21 80 2.8E-18 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like AM402_RS08065 e5f555f294bcaebdba3c97ed6d6cd7ad 85 Gene3D G3DSA:3.30.910.10 5 81 8.1E-23 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like AM402_RS08065 e5f555f294bcaebdba3c97ed6d6cd7ad 85 SUPERFAMILY SSF54857 5 81 7.06E-18 T 06-07-2017 IPR010391 DNA damage-inducible protein DinI-like AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 4.3E-121 T 06-07-2017 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.4E-20 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 160.164 T 06-07-2017 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 SUPERFAMILY SSF46785 11 88 3.45E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 Gene3D G3DSA:1.10.10.10 8 76 4.3E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 Gene3D G3DSA:1.20.120.530 80 236 1.6E-62 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 SMART SM00345 12 71 1.2E-22 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 SUPERFAMILY SSF48008 79 229 1.57E-63 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS10750 e348e3f2a1780f3516c8756a21b3269a 239 Pfam PF07840 FadR C-terminal domain 72 234 2.8E-72 T 06-07-2017 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AM402_RS15600 feff1cd065bc37f32dfd1290c6ed5ef5 377 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 373 3.6E-190 T 06-07-2017 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AM402_RS15600 feff1cd065bc37f32dfd1290c6ed5ef5 377 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 06-07-2017 IPR030390 RNA methyltransferase TrmA, active site AM402_RS15600 feff1cd065bc37f32dfd1290c6ed5ef5 377 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 83.169 T 06-07-2017 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 AM402_RS15600 feff1cd065bc37f32dfd1290c6ed5ef5 377 SUPERFAMILY SSF53335 8 372 3.29E-52 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15600 feff1cd065bc37f32dfd1290c6ed5ef5 377 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 06-07-2017 IPR030391 RNA methyltransferase TrmA, conserved site AM402_RS15600 feff1cd065bc37f32dfd1290c6ed5ef5 377 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 8 367 1.1E-58 T 06-07-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM402_RS15600 feff1cd065bc37f32dfd1290c6ed5ef5 377 Gene3D G3DSA:3.40.50.150 180 372 6.5E-49 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15600 feff1cd065bc37f32dfd1290c6ed5ef5 377 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 372 3.3E-17 T 06-07-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 PRINTS PR00175 Sodium/alanine symporter signature 350 372 3.3E-58 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 PRINTS PR00175 Sodium/alanine symporter signature 87 109 3.3E-58 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.3E-58 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.3E-58 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.3E-58 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 PRINTS PR00175 Sodium/alanine symporter signature 411 431 3.3E-58 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 6.1E-161 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS09980 478470e7f54efceb2972cdbb500b3a2d 489 Pfam PF01235 Sodium:alanine symporter family 48 450 7.3E-159 T 06-07-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM402_RS15185 f3be200643c4db2fd26079911f0689e3 128 Pfam PF11429 Colicin D 36 118 1.2E-24 T 06-07-2017 IPR024440 Colicin D C-terminal GO:0004540 AM402_RS15185 f3be200643c4db2fd26079911f0689e3 128 SUPERFAMILY SSF102824 32 122 1.65E-29 T 06-07-2017 AM402_RS03975 7f8c4afc2cbeaa9901cc3554e9361a01 172 SUPERFAMILY SSF49401 25 172 7.46E-36 T 06-07-2017 IPR008966 Adhesion domain AM402_RS03975 7f8c4afc2cbeaa9901cc3554e9361a01 172 Gene3D G3DSA:2.60.40.1090 25 172 1.2E-40 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS03975 7f8c4afc2cbeaa9901cc3554e9361a01 172 Pfam PF00419 Fimbrial protein 26 172 8.0E-20 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS10580 84a8d8cbe5855a887cc4a10fe45ff5d3 251 PIRSF PIRSF004846 3 247 1.4E-44 T 06-07-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AM402_RS10580 84a8d8cbe5855a887cc4a10fe45ff5d3 251 Gene3D G3DSA:3.40.190.10 24 112 2.5E-16 T 06-07-2017 AM402_RS10580 84a8d8cbe5855a887cc4a10fe45ff5d3 251 Gene3D G3DSA:3.40.190.10 206 245 2.5E-16 T 06-07-2017 AM402_RS10580 84a8d8cbe5855a887cc4a10fe45ff5d3 251 Gene3D G3DSA:3.40.190.10 113 205 7.6E-10 T 06-07-2017 AM402_RS10580 84a8d8cbe5855a887cc4a10fe45ff5d3 251 Pfam PF13531 Bacterial extracellular solute-binding protein 25 244 2.1E-41 T 06-07-2017 AM402_RS10580 84a8d8cbe5855a887cc4a10fe45ff5d3 251 SUPERFAMILY SSF53850 24 246 3.55E-45 T 06-07-2017 AM402_RS10580 84a8d8cbe5855a887cc4a10fe45ff5d3 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 243 1.8E-25 T 06-07-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 SUPERFAMILY SSF52540 84 363 9.82E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.3E-45 T 06-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 SMART SM00487 28 234 1.3E-50 T 06-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 06-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 SMART SM00490 270 351 4.1E-32 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 Pfam PF00271 Helicase conserved C-terminal domain 243 351 8.7E-30 T 06-07-2017 IPR001650 Helicase, C-terminal AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 Gene3D G3DSA:3.40.50.300 222 380 1.1E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 49.811 T 06-07-2017 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AM402_RS00695 10dafcdba77ff5821eb1d85e7503ccd5 432 Gene3D G3DSA:3.40.50.300 8 221 5.7E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10805 8362bb31226285198b082f999b95dba7 93 Pfam PF07023 Protein of unknown function (DUF1315) 5 82 2.3E-27 T 06-07-2017 IPR009749 Protein of unknown function DUF1315 AM402_RS13420 8b2abebdfd2fc0c23bdb1ecbe72f0c95 244 Pfam PF01914 MarC family integral membrane protein 8 219 2.8E-58 T 06-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM402_RS13420 8b2abebdfd2fc0c23bdb1ecbe72f0c95 244 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 13 215 4.7E-34 T 06-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM402_RS02355 0af097988ff905a05a75ea69bea1212a 499 SMART SM00382 34 183 3.1E-4 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS02355 0af097988ff905a05a75ea69bea1212a 499 Pfam PF07728 AAA domain (dynein-related subfamily) 37 167 1.1E-24 T 06-07-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM402_RS02355 0af097988ff905a05a75ea69bea1212a 499 Gene3D G3DSA:3.40.50.300 21 179 3.5E-17 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02355 0af097988ff905a05a75ea69bea1212a 499 SUPERFAMILY SSF52540 10 278 2.35E-18 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02355 0af097988ff905a05a75ea69bea1212a 499 Pfam PF12592 Protein of unknown function (DUF3763) 442 495 8.8E-19 T 06-07-2017 IPR022547 ATPase, RavA, C-terminal GO:0016820 AM402_RS11245 10d085883a0645c3507d78c607a71ac5 498 SUPERFAMILY SSF101960 42 86 1.18E-138 T 06-07-2017 AM402_RS11245 10d085883a0645c3507d78c607a71ac5 498 SUPERFAMILY SSF101960 128 495 1.18E-138 T 06-07-2017 AM402_RS11245 10d085883a0645c3507d78c607a71ac5 498 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 20 489 1.3E-197 T 06-07-2017 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AM402_RS11245 10d085883a0645c3507d78c607a71ac5 498 Pfam PF01458 Uncharacterized protein family (UPF0051) 237 469 1.6E-71 T 06-07-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AM402_RS13680 19bb76a662b4f519bf41d6e67a160dd1 152 Gene3D G3DSA:2.60.40.790 15 147 2.6E-20 T 06-07-2017 IPR008978 HSP20-like chaperone AM402_RS13680 19bb76a662b4f519bf41d6e67a160dd1 152 Pfam PF00011 Hsp20/alpha crystallin family 51 146 1.1E-16 T 06-07-2017 IPR002068 Alpha crystallin/Hsp20 domain AM402_RS13680 19bb76a662b4f519bf41d6e67a160dd1 152 SUPERFAMILY SSF49764 50 146 9.42E-20 T 06-07-2017 IPR008978 HSP20-like chaperone AM402_RS03870 e73e998d055b00122d0947d2e8da6ee6 284 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 63 85 - T 06-07-2017 IPR030470 UbiA prenyltransferase conserved site AM402_RS03870 e73e998d055b00122d0947d2e8da6ee6 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 6 283 9.8E-113 T 06-07-2017 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM402_RS03870 e73e998d055b00122d0947d2e8da6ee6 284 Pfam PF01040 UbiA prenyltransferase family 24 267 7.0E-66 T 06-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AM402_RS03870 e73e998d055b00122d0947d2e8da6ee6 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.969 T 06-07-2017 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM402_RS16820 c27bd06e1478f9d1a35150c3034303c7 251 Pfam PF08349 Protein of unknown function (DUF1722) 124 241 3.9E-40 T 06-07-2017 IPR013560 Domain of unknown function DUF1722 AM402_RS14375 96fe242b6e7e4e565777dc9266691746 340 Pfam PF02618 YceG-like family 46 332 1.5E-83 T 06-07-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like AM402_RS14375 96fe242b6e7e4e565777dc9266691746 340 Gene3D G3DSA:3.30.160.60 307 338 1.5E-19 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AM402_RS14375 96fe242b6e7e4e565777dc9266691746 340 Gene3D G3DSA:3.30.160.60 75 112 3.9E-20 T 06-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AM402_RS14375 96fe242b6e7e4e565777dc9266691746 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 11 336 1.9E-109 T 06-07-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like AM402_RS20585 e11b4dbe0fe1290038bca1e88d3738eb 154 Gene3D G3DSA:3.20.20.70 24 129 6.9E-9 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS20585 e11b4dbe0fe1290038bca1e88d3738eb 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 06-07-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM402_RS20585 e11b4dbe0fe1290038bca1e88d3738eb 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.7E-53 T 06-07-2017 AM402_RS20585 e11b4dbe0fe1290038bca1e88d3738eb 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 154 1.1E-63 T 06-07-2017 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AM402_RS20585 e11b4dbe0fe1290038bca1e88d3738eb 154 SUPERFAMILY SSF102114 24 125 2.62E-7 T 06-07-2017 AM402_RS20585 e11b4dbe0fe1290038bca1e88d3738eb 154 PIRSF PIRSF000368 1 154 1.3E-59 T 06-07-2017 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AM402_RS16290 5f6e735fb5e24a6ebdf08bb2a0811e3d 148 Pfam PF01475 Ferric uptake regulator family 11 130 1.8E-46 T 06-07-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM402_RS16290 5f6e735fb5e24a6ebdf08bb2a0811e3d 148 Gene3D G3DSA:1.10.10.10 2 82 2.2E-30 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16290 5f6e735fb5e24a6ebdf08bb2a0811e3d 148 SUPERFAMILY SSF46785 5 134 9.79E-44 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02420 6c512ea916279da95b73a0c1fbd26134 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 467 3.8E-63 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS02420 6c512ea916279da95b73a0c1fbd26134 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM402_RS02420 6c512ea916279da95b73a0c1fbd26134 551 Pfam PF00474 Sodium:solute symporter family 64 470 7.1E-124 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS11010 5cb86b5fe7403f3fca4ebd9598388723 680 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 505 2.6E-172 T 06-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM402_RS11010 5cb86b5fe7403f3fca4ebd9598388723 680 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 06-07-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM402_RS11010 5cb86b5fe7403f3fca4ebd9598388723 680 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 503 2.6E-173 T 06-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.3E-58 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.3E-58 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.3E-58 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.3E-58 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.3E-58 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.3E-58 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.8E-36 T 06-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.8E-36 T 06-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.8E-36 T 06-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.8E-36 T 06-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 06-07-2017 IPR020583 Inositol monophosphatase, metal-binding site AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 Gene3D G3DSA:3.40.190.80 152 259 1.2E-38 T 06-07-2017 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 Pfam PF00459 Inositol monophosphatase family 2 260 3.1E-72 T 06-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 Gene3D G3DSA:3.30.540.10 2 151 3.9E-53 T 06-07-2017 AM402_RS08550 70b9e7efcc60a8c3f03f729a3bd697b9 267 SUPERFAMILY SSF56655 1 258 4.19E-86 T 06-07-2017 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-6 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 Gene3D G3DSA:1.10.10.10 3 59 3.2E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 Pfam PF00294 pfkB family carbohydrate kinase 96 384 4.0E-47 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 SUPERFAMILY SSF46785 4 57 7.72E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 SMART SM00420 6 58 2.5E-17 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 PRINTS PR00990 Ribokinase signature 311 322 6.5E-16 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 PRINTS PR00990 Ribokinase signature 199 212 6.5E-16 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 PRINTS PR00990 Ribokinase signature 99 120 6.5E-16 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 PRINTS PR00990 Ribokinase signature 126 145 6.5E-16 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 PRINTS PR00990 Ribokinase signature 267 282 6.5E-16 T 06-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 SUPERFAMILY SSF53613 96 395 2.96E-56 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.3E-16 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS12585 2e56ec34b0930634df830e68db7a78e4 414 Gene3D G3DSA:3.40.1190.20 96 396 9.9E-60 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS00225 696f5b4f7d31a1813bb867d8959d45cc 88 Gene3D G3DSA:1.10.260.40 2 72 6.5E-41 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS00225 696f5b4f7d31a1813bb867d8959d45cc 88 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 2.4E-39 T 06-07-2017 AM402_RS00225 696f5b4f7d31a1813bb867d8959d45cc 88 SUPERFAMILY SSF47413 2 72 8.44E-31 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS19510 68f55133f1d11f76fabc10eff93c421f 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 8 101 2.9E-31 T 06-07-2017 IPR010279 Protein of unknown function DUF883, ElaB AM402_RS21125 5cea198641560a1e917062520159ea0c 404 SUPERFAMILY SSF103473 8 394 3.01E-49 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS21125 5cea198641560a1e917062520159ea0c 404 Gene3D G3DSA:1.20.1250.20 208 394 7.9E-5 T 06-07-2017 AM402_RS21125 5cea198641560a1e917062520159ea0c 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 390 1.2E-94 T 06-07-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM402_RS21125 5cea198641560a1e917062520159ea0c 404 Gene3D G3DSA:1.20.1250.20 24 194 1.8E-23 T 06-07-2017 AM402_RS21125 5cea198641560a1e917062520159ea0c 404 Pfam PF07690 Major Facilitator Superfamily 24 355 6.6E-34 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS19270 d936a5f1d4eebe963b41b2b5aeb72082 397 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 393 1.7E-153 T 06-07-2017 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AM402_RS19270 d936a5f1d4eebe963b41b2b5aeb72082 397 SUPERFAMILY SSF53383 29 392 8.01E-89 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS19270 d936a5f1d4eebe963b41b2b5aeb72082 397 Gene3D G3DSA:3.40.640.10 6 258 1.8E-73 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS19270 d936a5f1d4eebe963b41b2b5aeb72082 397 PIRSF PIRSF001434 1 396 2.9E-118 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS19270 d936a5f1d4eebe963b41b2b5aeb72082 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS19270 d936a5f1d4eebe963b41b2b5aeb72082 397 Gene3D G3DSA:3.90.1150.10 259 394 2.2E-38 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS19270 d936a5f1d4eebe963b41b2b5aeb72082 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 392 5.0E-112 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 SMART SM01230 102 379 1.6E-144 T 06-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 Gene3D G3DSA:3.30.590.10 106 455 3.6E-136 T 06-07-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 Gene3D G3DSA:3.10.20.70 4 105 5.6E-40 T 06-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 SUPERFAMILY SSF54368 3 100 1.06E-36 T 06-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 SUPERFAMILY SSF55931 102 468 1.77E-134 T 06-07-2017 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 06-07-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 06-07-2017 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 06-07-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.2E-135 T 06-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.3E-210 T 06-07-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM402_RS03230 80cd461bbd1c9aad98612ca563ea6862 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.5E-31 T 06-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM402_RS18125 3cfdaee8076f44333c575eaaf2bce152 107 SMART SM00530 19 74 1.3E-14 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS18125 3cfdaee8076f44333c575eaaf2bce152 107 Gene3D G3DSA:1.10.260.40 16 90 8.8E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18125 3cfdaee8076f44333c575eaaf2bce152 107 Pfam PF01381 Helix-turn-helix 20 74 1.2E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS18125 3cfdaee8076f44333c575eaaf2bce152 107 SUPERFAMILY SSF47413 8 79 5.38E-21 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18930 d52c8824594aa9339daa86a11d0c03fc 456 Pfam PF07690 Major Facilitator Superfamily 20 354 2.1E-45 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS18930 d52c8824594aa9339daa86a11d0c03fc 456 SUPERFAMILY SSF103473 1 391 1.27E-66 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS18930 d52c8824594aa9339daa86a11d0c03fc 456 Gene3D G3DSA:1.20.1250.20 11 196 5.7E-35 T 06-07-2017 AM402_RS18930 d52c8824594aa9339daa86a11d0c03fc 456 Gene3D G3DSA:1.20.1250.20 213 393 2.8E-28 T 06-07-2017 AM402_RS11560 b3196e685e50db146735cffa6a3efc72 263 SMART SM01040 80 178 1.8E-8 T 06-07-2017 IPR003497 BRO N-terminal domain AM402_RS11560 b3196e685e50db146735cffa6a3efc72 263 Pfam PF02498 BRO family, N-terminal domain 87 173 1.9E-5 T 06-07-2017 IPR003497 BRO N-terminal domain AM402_RS16500 b3196e685e50db146735cffa6a3efc72 263 SMART SM01040 80 178 1.8E-8 T 06-07-2017 IPR003497 BRO N-terminal domain AM402_RS16500 b3196e685e50db146735cffa6a3efc72 263 Pfam PF02498 BRO family, N-terminal domain 87 173 1.9E-5 T 06-07-2017 IPR003497 BRO N-terminal domain AM402_RS19990 16a4fa419312d6089f978540921b88f0 194 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 4.2E-69 T 06-07-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS19990 16a4fa419312d6089f978540921b88f0 194 PIRSF PIRSF004553 12 192 1.6E-56 T 06-07-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM402_RS19990 16a4fa419312d6089f978540921b88f0 194 SUPERFAMILY SSF53335 12 190 1.69E-55 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS19990 16a4fa419312d6089f978540921b88f0 194 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS19990 16a4fa419312d6089f978540921b88f0 194 Gene3D G3DSA:3.40.50.150 8 190 1.4E-66 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS19990 16a4fa419312d6089f978540921b88f0 194 Pfam PF03602 Conserved hypothetical protein 95 13 188 1.0E-62 T 06-07-2017 AM402_RS03530 72a53ca9d451db29a6688d8dede4f350 73 Gene3D G3DSA:1.10.10.610 1 71 7.7E-37 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 AM402_RS03530 72a53ca9d451db29a6688d8dede4f350 73 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 66 3.0E-26 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 AM402_RS03530 72a53ca9d451db29a6688d8dede4f350 73 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.578 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 AM402_RS03530 72a53ca9d451db29a6688d8dede4f350 73 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 1.1E-34 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 AM402_RS03530 72a53ca9d451db29a6688d8dede4f350 73 SUPERFAMILY SSF118001 1 71 1.44E-28 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 AM402_RS03530 72a53ca9d451db29a6688d8dede4f350 73 PIRSF PIRSF006169 1 73 6.0E-37 T 06-07-2017 IPR010648 Uncharacterised protein family UPF0270 AM402_RS04145 7a130fda61347341666c3b154459820b 251 SMART SM00342 157 240 4.1E-14 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS04145 7a130fda61347341666c3b154459820b 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 9.3E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS04145 7a130fda61347341666c3b154459820b 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 9.3E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS04145 7a130fda61347341666c3b154459820b 251 SUPERFAMILY SSF46689 203 241 1.25E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS04145 7a130fda61347341666c3b154459820b 251 Gene3D G3DSA:1.10.10.60 194 241 1.1E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS04145 7a130fda61347341666c3b154459820b 251 Pfam PF12833 Helix-turn-helix domain 165 241 6.6E-14 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS15690 575fb82f1b3e0187aec76b67b803bd18 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 6.6E-112 T 06-07-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM402_RS15690 575fb82f1b3e0187aec76b67b803bd18 257 SUPERFAMILY SSF51366 1 256 2.83E-72 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM402_RS15690 575fb82f1b3e0187aec76b67b803bd18 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.909 T 06-07-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM402_RS15690 575fb82f1b3e0187aec76b67b803bd18 257 Pfam PF00977 Histidine biosynthesis protein 5 239 5.2E-75 T 06-07-2017 IPR006062 Histidine biosynthesis GO:0000105 AM402_RS15690 575fb82f1b3e0187aec76b67b803bd18 257 Gene3D G3DSA:3.20.20.70 4 257 2.6E-86 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS15325 1a95c9cef3c42ae9f6f01b4847a0bb46 578 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 561 2.2E-60 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like AM402_RS02085 01f15cb34085310e8fab7ecf7fa45b1a 134 Pfam PF04076 Bacterial OB fold (BOF) protein 36 130 2.6E-34 T 06-07-2017 IPR005220 Bacterial OB-fold AM402_RS02085 01f15cb34085310e8fab7ecf7fa45b1a 134 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 19 131 3.9E-37 T 06-07-2017 IPR016052 Bacteriophage 933W, L0136 AM402_RS02085 01f15cb34085310e8fab7ecf7fa45b1a 134 Gene3D G3DSA:2.40.50.200 34 134 3.8E-40 T 06-07-2017 IPR005220 Bacterial OB-fold AM402_RS02085 01f15cb34085310e8fab7ecf7fa45b1a 134 SUPERFAMILY SSF101756 35 132 7.72E-33 T 06-07-2017 IPR005220 Bacterial OB-fold AM402_RS06025 f70d34c2118fdddf8428e4bebb595a5c 217 SUPERFAMILY SSF55120 7 213 4.16E-64 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06025 f70d34c2118fdddf8428e4bebb595a5c 217 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 59 73 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06025 f70d34c2118fdddf8428e4bebb595a5c 217 Pfam PF00849 RNA pseudouridylate synthase 21 167 2.9E-30 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06025 f70d34c2118fdddf8428e4bebb595a5c 217 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 211 2.3E-59 T 06-07-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS15655 88350501882fe97866bd7590f7b2445f 273 SUPERFAMILY SSF51735 1 265 1.52E-24 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15655 88350501882fe97866bd7590f7b2445f 273 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 203 2.0E-5 T 06-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AM402_RS15655 88350501882fe97866bd7590f7b2445f 273 Gene3D G3DSA:3.40.50.720 1 81 5.1E-10 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15655 88350501882fe97866bd7590f7b2445f 273 Gene3D G3DSA:3.40.50.720 88 217 1.0E-9 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS05525 40c511dbfad5bbd4c842ee41b3c40928 1189 Pfam PF07916 TraG-like protein, N-terminal region 3 456 6.1E-106 T 06-07-2017 IPR012931 TraG-like, N-terminal AM402_RS13470 8470330c892be37380432db6027be751 463 SUPERFAMILY SSF118215 29 441 1.96E-97 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS13470 8470330c892be37380432db6027be751 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 3.1E-103 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS13470 8470330c892be37380432db6027be751 463 Gene3D G3DSA:1.10.3860.10 24 449 2.0E-102 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS13470 8470330c892be37380432db6027be751 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.6E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS13470 8470330c892be37380432db6027be751 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.6E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS13470 8470330c892be37380432db6027be751 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.6E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS13470 8470330c892be37380432db6027be751 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 2.6E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS13470 8470330c892be37380432db6027be751 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 2.6E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS13470 8470330c892be37380432db6027be751 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 2.6E-27 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS06080 861123f267aed5fe68fcbd8f84afd61b 159 Gene3D G3DSA:3.30.700.10 15 53 2.4E-4 T 06-07-2017 AM402_RS06080 861123f267aed5fe68fcbd8f84afd61b 159 SUPERFAMILY SSF54523 15 75 8.63E-8 T 06-07-2017 AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 Pfam PF07687 Peptidase dimerisation domain 178 275 1.6E-20 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 PIRSF PIRSF037238 1 376 1.6E-133 T 06-07-2017 IPR017150 Peptidase M20, glutamate carboxypeptidase AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 Pfam PF01546 Peptidase family M20/M25/M40 76 373 1.9E-28 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 SUPERFAMILY SSF55031 180 292 1.31E-20 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 Gene3D G3DSA:3.40.630.10 3 180 9.1E-57 T 06-07-2017 AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 Gene3D G3DSA:3.40.630.10 290 376 9.1E-57 T 06-07-2017 AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 Gene3D G3DSA:3.30.70.360 181 283 4.3E-24 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 SUPERFAMILY SSF53187 301 375 1.91E-53 T 06-07-2017 AM402_RS02150 4fd0071b078a459b9cd17699c585cc60 377 SUPERFAMILY SSF53187 4 189 1.91E-53 T 06-07-2017 AM402_RS04750 ca4f37d1fce63210e8323555ded27130 202 Pfam PF11140 Protein of unknown function (DUF2913) 12 175 2.8E-26 T 06-07-2017 IPR021316 Protein of unknown function DUF2913 AM402_RS21335 2276478c40b34c7a6e7727d1f377ee7a 271 Pfam PF01636 Phosphotransferase enzyme family 89 256 1.7E-26 T 06-07-2017 IPR002575 Aminoglycoside phosphotransferase AM402_RS21335 2276478c40b34c7a6e7727d1f377ee7a 271 Gene3D G3DSA:3.90.1200.10 100 271 1.3E-49 T 06-07-2017 AM402_RS21335 2276478c40b34c7a6e7727d1f377ee7a 271 Gene3D G3DSA:3.30.200.20 10 99 1.5E-39 T 06-07-2017 AM402_RS21335 2276478c40b34c7a6e7727d1f377ee7a 271 SUPERFAMILY SSF56112 17 270 5.54E-52 T 06-07-2017 IPR011009 Protein kinase-like domain AM402_RS21335 2276478c40b34c7a6e7727d1f377ee7a 271 PIRSF PIRSF000706 6 271 7.9E-99 T 06-07-2017 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 AM402_RS05065 24d8cd2cfb92fe182a395be198178c9f 184 SUPERFAMILY SSF54862 18 119 1.38E-22 T 06-07-2017 AM402_RS05065 24d8cd2cfb92fe182a395be198178c9f 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS05065 24d8cd2cfb92fe182a395be198178c9f 184 Gene3D G3DSA:3.30.70.20 84 120 6.6E-6 T 06-07-2017 AM402_RS05065 24d8cd2cfb92fe182a395be198178c9f 184 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.5E-12 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS05065 24d8cd2cfb92fe182a395be198178c9f 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS05065 24d8cd2cfb92fe182a395be198178c9f 184 Gene3D G3DSA:3.30.70.20 5 83 7.2E-20 T 06-07-2017 AM402_RS13260 3df34da2d153cb6c04b610b9afaace43 172 Pfam PF00419 Fimbrial protein 28 171 2.5E-7 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS13260 3df34da2d153cb6c04b610b9afaace43 172 Gene3D G3DSA:2.60.40.1090 24 172 1.2E-13 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS13260 3df34da2d153cb6c04b610b9afaace43 172 SUPERFAMILY SSF49401 25 172 1.14E-13 T 06-07-2017 IPR008966 Adhesion domain AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Gene3D G3DSA:1.25.40.10 309 408 1.4E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Gene3D G3DSA:1.25.40.10 32 51 1.4E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Pfam PF08238 Sel1 repeat 98 132 2.1 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Pfam PF08238 Sel1 repeat 810 832 0.38 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Pfam PF08238 Sel1 repeat 443 470 150.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Pfam PF08238 Sel1 repeat 321 352 57.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Pfam PF08238 Sel1 repeat 60 93 0.0022 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SUPERFAMILY SSF81901 36 130 1.05E-14 T 06-07-2017 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SUPERFAMILY SSF81901 240 388 1.05E-14 T 06-07-2017 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SUPERFAMILY SSF81901 612 688 1.7E-5 T 06-07-2017 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SUPERFAMILY SSF81901 721 788 1.7E-5 T 06-07-2017 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SMART SM00671 321 349 190.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SMART SM00671 60 95 2.5E-5 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SMART SM00671 358 393 15.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SMART SM00671 652 688 160.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SMART SM00671 96 132 12.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SMART SM00671 801 837 55.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SUPERFAMILY SSF48452 32 66 3.68E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 SUPERFAMILY SSF48452 743 838 3.68E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Gene3D G3DSA:1.25.40.10 647 682 1.0E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Gene3D G3DSA:1.25.40.10 435 470 1.0E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08230 3a2459bbc209b2a270d8c92a0db5cb6f 952 Gene3D G3DSA:1.25.40.10 52 139 7.2E-18 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS17865 592a6e10be82a99d334899e9b1b53ca5 688 Gene3D G3DSA:3.40.50.300 164 259 5.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17865 592a6e10be82a99d334899e9b1b53ca5 688 Gene3D G3DSA:3.40.50.300 439 653 5.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17865 592a6e10be82a99d334899e9b1b53ca5 688 SUPERFAMILY SSF52540 393 653 1.36E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17865 592a6e10be82a99d334899e9b1b53ca5 688 SUPERFAMILY SSF52540 144 323 1.36E-53 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17865 592a6e10be82a99d334899e9b1b53ca5 688 Pfam PF01935 Domain of unknown function DUF87 174 225 4.9E-5 T 06-07-2017 IPR002789 Helicase HerA, central domain AM402_RS17865 592a6e10be82a99d334899e9b1b53ca5 688 Pfam PF12696 TraM recognition site of TraD and TraG 504 629 6.1E-11 T 06-07-2017 IPR032689 TraD/TraG, TraM recognition site AM402_RS17865 592a6e10be82a99d334899e9b1b53ca5 688 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 650 0.0 T 06-07-2017 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 AM402_RS17865 592a6e10be82a99d334899e9b1b53ca5 688 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 650 2.7E-262 T 06-07-2017 IPR022458 Conjugative coupling factor TraG/TraD AM402_RS17345 7d0bf2efc17c3124d8d5189de4220684 187 Pfam PF02325 YGGT family 109 172 2.8E-19 T 06-07-2017 IPR003425 CCB3/YggT GO:0016020 AM402_RS17345 7d0bf2efc17c3124d8d5189de4220684 187 Pfam PF02325 YGGT family 10 79 9.2E-20 T 06-07-2017 IPR003425 CCB3/YggT GO:0016020 AM402_RS10755 cc8f0b9b0715ec5e125d4c8904fc6747 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 3.4E-23 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS10755 cc8f0b9b0715ec5e125d4c8904fc6747 159 SUPERFAMILY SSF141452 4 157 1.1E-35 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS10755 cc8f0b9b0715ec5e125d4c8904fc6747 159 Gene3D G3DSA:2.30.110.20 4 151 2.5E-22 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS10755 cc8f0b9b0715ec5e125d4c8904fc6747 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 2 157 1.0E-59 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS09750 e744f7bcd23c77617b915de460339b3a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 7.5E-30 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS09750 e744f7bcd23c77617b915de460339b3a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 7.5E-30 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS09750 e744f7bcd23c77617b915de460339b3a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 7.5E-30 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS09750 e744f7bcd23c77617b915de460339b3a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 7.5E-30 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS09750 e744f7bcd23c77617b915de460339b3a 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 252 1.3E-71 T 06-07-2017 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AM402_RS09750 e744f7bcd23c77617b915de460339b3a 260 Pfam PF01311 Bacterial export proteins, family 1 15 245 3.3E-65 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS20340 5444a7091193d9e59e48e2ab7905f05d 260 Pfam PF13350 Tyrosine phosphatase family 13 260 1.1E-58 T 06-07-2017 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AM402_RS20340 5444a7091193d9e59e48e2ab7905f05d 260 SUPERFAMILY SSF52799 12 259 3.34E-49 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like AM402_RS20340 5444a7091193d9e59e48e2ab7905f05d 260 Gene3D G3DSA:3.90.190.10 16 191 3.9E-14 T 06-07-2017 IPR029021 Protein-tyrosine phosphatase-like AM402_RS04855 2f657732ee362f5463de237d7ac2084a 203 Gene3D G3DSA:3.40.50.1110 19 198 4.8E-16 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS04855 2f657732ee362f5463de237d7ac2084a 203 SUPERFAMILY SSF52266 19 199 9.33E-17 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS04855 2f657732ee362f5463de237d7ac2084a 203 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 24 187 5.1E-9 T 06-07-2017 IPR001087 GDSL lipase/esterase GO:0016788 AM402_RS11665 e5eeeca4f2e617fc2b68050cba4ae290 1111 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 142 216 6.4E-24 T 06-07-2017 IPR013491 Caudovirus, tape measure, N-terminal AM402_RS11665 e5eeeca4f2e617fc2b68050cba4ae290 1111 Pfam PF06120 Tail length tape measure protein 404 652 3.8E-13 T 06-07-2017 IPR009302 Tail length tape measure AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 06-07-2017 IPR019844 Cold-shock conserved site AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 PIRSF PIRSF002599 1 69 8.6E-26 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 SMART SM00357 5 69 1.3E-32 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.2E-32 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 SUPERFAMILY SSF50249 4 68 1.18E-25 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 PRINTS PR00050 Cold shock protein signature 6 21 1.2E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 PRINTS PR00050 Cold shock protein signature 42 60 1.2E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 PRINTS PR00050 Cold shock protein signature 27 36 1.2E-18 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS16880 607825dc236052d185d890651c4cfd6e 69 Gene3D G3DSA:2.40.50.140 5 67 8.8E-32 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS07735 4c72012643c07455644998e517c2f212 235 Pfam PF13098 Thioredoxin-like domain 104 230 5.2E-29 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS07735 4c72012643c07455644998e517c2f212 235 Gene3D G3DSA:3.10.450.70 22 81 2.1E-21 T 06-07-2017 IPR009094 Disulphide bond isomerase, DsbC, N-terminal AM402_RS07735 4c72012643c07455644998e517c2f212 235 SUPERFAMILY SSF52833 87 232 4.91E-30 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS07735 4c72012643c07455644998e517c2f212 235 Gene3D G3DSA:3.40.30.10 99 232 8.5E-36 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS07735 4c72012643c07455644998e517c2f212 235 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 6.9E-14 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM402_RS07735 4c72012643c07455644998e517c2f212 235 SUPERFAMILY SSF54423 24 81 2.09E-13 T 06-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM402_RS16595 17abebdcf055709e4c65f07000046759 165 Gene3D G3DSA:1.10.10.10 26 90 7.1E-7 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06340 ae50a56a6234e2bbdbf2ff5803d38e2c 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 82 5.0E-25 T 06-07-2017 IPR009778 Modulator of Rho-dependent transcription termination AM402_RS06340 ae50a56a6234e2bbdbf2ff5803d38e2c 86 SUPERFAMILY SSF101744 1 84 8.89E-27 T 06-07-2017 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AM402_RS18185 3c93a8fb406f25b54dbbd0f21b6afaf9 178 SUPERFAMILY SSF49401 25 178 2.39E-30 T 06-07-2017 IPR008966 Adhesion domain AM402_RS18185 3c93a8fb406f25b54dbbd0f21b6afaf9 178 Gene3D G3DSA:2.60.40.1090 25 177 1.7E-35 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18185 3c93a8fb406f25b54dbbd0f21b6afaf9 178 Pfam PF00419 Fimbrial protein 28 177 1.2E-14 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS01410 175f84184879fb526df65f31e600d287 208 Pfam PF04717 Type VI secretion system, phage-baseplate injector 4 114 1.1E-45 T 06-07-2017 IPR006531 Gp5 N-terminal AM402_RS01410 175f84184879fb526df65f31e600d287 208 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 7 206 4.4E-57 T 06-07-2017 IPR013046 Phage baseplate assembly protein V/Gp45 AM402_RS19180 f7bccc9f9001f01f18b92e37056e9cb5 258 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 175 186 - T 06-07-2017 IPR033130 Ribonuclease T2, His active site 2 AM402_RS19180 f7bccc9f9001f01f18b92e37056e9cb5 258 Pfam PF00445 Ribonuclease T2 family 72 205 1.1E-5 T 06-07-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AM402_RS19180 f7bccc9f9001f01f18b92e37056e9cb5 258 SUPERFAMILY SSF55895 67 255 3.53E-23 T 06-07-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AM402_RS19180 f7bccc9f9001f01f18b92e37056e9cb5 258 Gene3D G3DSA:3.90.730.10 65 256 4.1E-24 T 06-07-2017 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AM402_RS19195 b3a060260b49afbc2a279e85abe386e1 302 Pfam PF04381 Putative exonuclease, RdgC 2 300 3.0E-129 T 06-07-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 AM402_RS19195 b3a060260b49afbc2a279e85abe386e1 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 40.849 T 06-07-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 313 38.53 T 06-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 Gene3D G3DSA:1.10.150.170 113 217 1.9E-37 T 06-07-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 Pfam PF01795 MraW methylase family 5 312 1.2E-114 T 06-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 Gene3D G3DSA:3.40.50.150 218 314 5.7E-49 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 Gene3D G3DSA:3.40.50.150 8 111 5.7E-49 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 PIRSF PIRSF004486 2 314 1.3E-101 T 06-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 SUPERFAMILY SSF81799 115 215 2.88E-33 T 06-07-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 312 2.6E-125 T 06-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 SUPERFAMILY SSF53335 8 114 3.9E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS07405 da63a701151630e67da0f0de01f3d15d 315 SUPERFAMILY SSF53335 215 313 3.9E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS20145 6b356278d3ffefa2a14f2c7eb503c242 397 Gene3D G3DSA:3.20.20.70 36 392 1.1E-125 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS20145 6b356278d3ffefa2a14f2c7eb503c242 397 PIRSF PIRSF000138 18 394 9.6E-128 T 06-07-2017 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AM402_RS20145 6b356278d3ffefa2a14f2c7eb503c242 397 Pfam PF01070 FMN-dependent dehydrogenase 47 391 3.4E-113 T 06-07-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 AM402_RS20145 6b356278d3ffefa2a14f2c7eb503c242 397 SUPERFAMILY SSF51395 36 390 4.34E-92 T 06-07-2017 AM402_RS20145 6b356278d3ffefa2a14f2c7eb503c242 397 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 288 294 - T 06-07-2017 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AM402_RS17760 301b2291959e0fa0b4d3c279cb82248d 296 Pfam PF12834 Phage integrase, N-terminal 2 91 6.7E-36 T 06-07-2017 IPR024457 Putative integrase, N-terminal AM402_RS17760 301b2291959e0fa0b4d3c279cb82248d 296 SUPERFAMILY SSF56349 17 292 2.03E-12 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS17760 301b2291959e0fa0b4d3c279cb82248d 296 Gene3D G3DSA:1.10.443.10 128 279 5.0E-5 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS17760 301b2291959e0fa0b4d3c279cb82248d 296 Pfam PF12835 Integrase 104 251 2.6E-59 T 06-07-2017 IPR024456 Integrase catalytic domain, putative AM402_RS17760 301b2291959e0fa0b4d3c279cb82248d 296 Gene3D G3DSA:1.10.150.130 28 85 7.3E-4 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS07720 d46055f197047774efb90be0db52c276 135 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 21 133 3.0E-25 T 06-07-2017 IPR009883 Toxin CptA AM402_RS07720 d46055f197047774efb90be0db52c276 135 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 130 2.2E-51 T 06-07-2017 IPR009883 Toxin CptA AM402_RS01705 575b21888d77e7e59346fb5dcb706d6a 350 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 344 3.1E-161 T 06-07-2017 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 AM402_RS01705 575b21888d77e7e59346fb5dcb706d6a 350 SUPERFAMILY SSF53756 1 345 2.04E-95 T 06-07-2017 AM402_RS01705 575b21888d77e7e59346fb5dcb706d6a 350 Gene3D G3DSA:3.40.50.2000 170 345 2.6E-54 T 06-07-2017 AM402_RS01705 575b21888d77e7e59346fb5dcb706d6a 350 Gene3D G3DSA:3.40.50.2000 1 141 5.1E-54 T 06-07-2017 AM402_RS01705 575b21888d77e7e59346fb5dcb706d6a 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 325 3.5E-81 T 06-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM402_RS02245 e244c93982e849f920d1531f027ead36 538 PIRSF PIRSF004567 1 538 7.9E-218 T 06-07-2017 IPR016421 Transposition, TnsE AM402_RS01640 2c11ef16279f8962e4b89e37d5c76443 184 SUPERFAMILY SSF51161 32 172 6.79E-26 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS01640 2c11ef16279f8962e4b89e37d5c76443 184 Gene3D G3DSA:2.160.10.10 84 181 1.7E-17 T 06-07-2017 AM402_RS01640 2c11ef16279f8962e4b89e37d5c76443 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 163 1.5E-5 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS10235 a51fa942f76268b83b510693726b2dca 123 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 9 120 6.1E-33 T 06-07-2017 IPR006504 Transcriptional regulator Spx/MgsR AM402_RS10235 a51fa942f76268b83b510693726b2dca 123 Gene3D G3DSA:3.40.30.10 8 120 4.6E-40 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS10235 a51fa942f76268b83b510693726b2dca 123 SUPERFAMILY SSF52833 8 120 1.64E-30 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS10235 a51fa942f76268b83b510693726b2dca 123 Pfam PF03960 ArsC family 11 120 1.8E-16 T 06-07-2017 IPR006660 Arsenate reductase-like AM402_RS06790 26f98494c30c6cc13fd0e65e8f8522b5 506 Gene3D G3DSA:3.30.1300.30 416 506 4.8E-20 T 06-07-2017 AM402_RS06790 26f98494c30c6cc13fd0e65e8f8522b5 506 Pfam PF03895 YadA-like C-terminal region 430 506 1.0E-16 T 06-07-2017 IPR005594 YadA-like, C-terminal AM402_RS06790 26f98494c30c6cc13fd0e65e8f8522b5 506 SUPERFAMILY SSF54523 414 506 1.88E-17 T 06-07-2017 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 513 1.9E-53 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 SMART SM00091 8 74 0.0024 T 06-07-2017 IPR000014 PAS domain AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 SMART SM00283 267 514 5.9E-80 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 Pfam PF08447 PAS fold 30 112 2.1E-15 T 06-07-2017 IPR013655 PAS fold-3 GO:0005515 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 SUPERFAMILY SSF58104 242 513 7.06E-63 T 06-07-2017 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 Gene3D G3DSA:3.30.450.20 20 114 4.7E-24 T 06-07-2017 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 SMART SM00086 80 121 0.0058 T 06-07-2017 IPR001610 PAC motif AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 5.8E-46 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 5.8E-46 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 5.8E-46 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 5.8E-46 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 SUPERFAMILY SSF55785 21 114 3.32E-26 T 06-07-2017 IPR000014 PAS domain AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 Gene3D G3DSA:1.10.287.950 282 486 9.5E-56 T 06-07-2017 AM402_RS03555 b8d51bcfe869270b9c34f1f8c5d2ad9f 514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 125 7.2E-17 T 06-07-2017 IPR000014 PAS domain AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 SUPERFAMILY SSF52540 467 538 1.11E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 SUPERFAMILY SSF52540 214 431 1.11E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 SUPERFAMILY SSF52540 56 179 1.11E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 SUPERFAMILY SSF52540 596 670 1.11E-35 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 Gene3D G3DSA:3.40.50.300 585 671 1.9E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 Gene3D G3DSA:3.40.50.300 312 425 1.9E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 Gene3D G3DSA:3.40.50.300 224 311 1.2E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 Gene3D G3DSA:3.40.50.300 53 187 1.2E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 Pfam PF00580 UvrD/REP helicase N-terminal domain 223 308 7.5E-6 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AM402_RS17890 ff7f7b4db245fa10aabb55f23abaa9c8 706 Pfam PF13245 Part of AAA domain 63 130 3.4E-6 T 06-07-2017 AM402_RS15535 ec1219c0ac9633f570d5233ed0bdb7f1 72 SMART SM00316 4 72 2.7E-7 T 06-07-2017 IPR022967 RNA-binding domain, S1 AM402_RS15535 ec1219c0ac9633f570d5233ed0bdb7f1 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.121 T 06-07-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM402_RS15535 ec1219c0ac9633f570d5233ed0bdb7f1 72 Gene3D G3DSA:2.40.50.140 1 71 2.3E-38 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS15535 ec1219c0ac9633f570d5233ed0bdb7f1 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.6E-27 T 06-07-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AM402_RS15535 ec1219c0ac9633f570d5233ed0bdb7f1 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.1E-38 T 06-07-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM402_RS15535 ec1219c0ac9633f570d5233ed0bdb7f1 72 SUPERFAMILY SSF50249 1 70 1.05E-28 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS14800 7650f7e10470fa25f8877d5e862e9bc8 457 Gene3D G3DSA:1.10.860.10 2 96 5.6E-10 T 06-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM402_RS14800 7650f7e10470fa25f8877d5e862e9bc8 457 Pfam PF03796 DnaB-like helicase C terminal domain 174 422 4.7E-69 T 06-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM402_RS14800 7650f7e10470fa25f8877d5e862e9bc8 457 Pfam PF00772 DnaB-like helicase N terminal domain 2 96 5.2E-12 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS14800 7650f7e10470fa25f8877d5e862e9bc8 457 SUPERFAMILY SSF52540 173 421 1.75E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14800 7650f7e10470fa25f8877d5e862e9bc8 457 SUPERFAMILY SSF48024 2 105 3.01E-13 T 06-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM402_RS14800 7650f7e10470fa25f8877d5e862e9bc8 457 Gene3D G3DSA:3.40.50.300 161 421 8.3E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16885 6a0339d69a67cccda165127dc9694e41 157 SUPERFAMILY SSF46767 71 153 8.5E-31 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM402_RS16885 6a0339d69a67cccda165127dc9694e41 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 122 128 - T 06-07-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM402_RS16885 6a0339d69a67cccda165127dc9694e41 157 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 154 36.316 T 06-07-2017 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AM402_RS16885 6a0339d69a67cccda165127dc9694e41 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 151 1.9E-31 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM402_RS16885 6a0339d69a67cccda165127dc9694e41 157 Gene3D G3DSA:1.10.10.10 70 156 1.6E-33 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS16885 6a0339d69a67cccda165127dc9694e41 157 SUPERFAMILY SSF53155 1 76 3.92E-14 T 06-07-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM402_RS16885 6a0339d69a67cccda165127dc9694e41 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 153 6.9E-30 T 06-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM402_RS09935 3f0005ea8e017f4154fa040e564c235d 137 Pfam PF06146 Phosphate-starvation-inducible E 60 124 8.1E-14 T 06-07-2017 IPR020948 Phosphate-starvation-induced PsiE-like AM402_RS09935 3f0005ea8e017f4154fa040e564c235d 137 Hamap MF_01048 Protein PsiE [psiE]. 3 137 24.128 T 06-07-2017 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AM402_RS09935 3f0005ea8e017f4154fa040e564c235d 137 PIRSF PIRSF029598 1 137 3.7E-45 T 06-07-2017 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AM402_RS14810 6bef26d86f7ae5294698288815f2d23a 283 Gene3D G3DSA:1.10.10.10 37 76 2.1E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14810 6bef26d86f7ae5294698288815f2d23a 283 SUPERFAMILY SSF46785 30 76 8.0E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS14810 6bef26d86f7ae5294698288815f2d23a 283 Pfam PF13730 Helix-turn-helix domain 24 70 2.6E-8 T 06-07-2017 AM402_RS17220 7af3a25be0e648d44780436d9c8a2a7f 75 Pfam PF04400 Protein of unknown function (DUF539) 23 65 2.7E-23 T 06-07-2017 IPR007495 (Na+)-NQR maturation factor NqrM AM402_RS07825 bbb5b885156c76cc02130f0853bac6b7 584 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 8 64 2.1E-19 T 06-07-2017 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 AM402_RS07825 bbb5b885156c76cc02130f0853bac6b7 584 Pfam PF03237 Terminase-like family 158 567 1.8E-106 T 06-07-2017 IPR004921 Terminase, large subunit AM402_RS01465 bbb5b885156c76cc02130f0853bac6b7 584 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 8 64 2.1E-19 T 06-07-2017 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 AM402_RS01465 bbb5b885156c76cc02130f0853bac6b7 584 Pfam PF03237 Terminase-like family 158 567 1.8E-106 T 06-07-2017 IPR004921 Terminase, large subunit AM402_RS04060 35de9dc09830c240d9436c857d2ca592 168 Pfam PF00936 BMC domain 3 78 5.3E-24 T 06-07-2017 IPR000249 Microcompartment protein, bacteria AM402_RS04060 35de9dc09830c240d9436c857d2ca592 168 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 48 2.0E-14 T 06-07-2017 AM402_RS04060 35de9dc09830c240d9436c857d2ca592 168 SUPERFAMILY SSF143414 1 88 3.92E-25 T 06-07-2017 AM402_RS04060 35de9dc09830c240d9436c857d2ca592 168 SMART SM00877 2 78 2.0E-28 T 06-07-2017 IPR000249 Microcompartment protein, bacteria AM402_RS18190 2ff2065fc40175e85bc83347519d0dda 172 Gene3D G3DSA:2.60.40.1090 38 172 8.5E-4 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18190 2ff2065fc40175e85bc83347519d0dda 172 SUPERFAMILY SSF49401 46 172 1.54E-19 T 06-07-2017 IPR008966 Adhesion domain AM402_RS18190 2ff2065fc40175e85bc83347519d0dda 172 Pfam PF00419 Fimbrial protein 42 172 6.4E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS07460 dfe0f106f634e9db1b01f4cb0fbfcdfd 262 Pfam PF03799 Cell division protein FtsQ 131 244 4.4E-24 T 06-07-2017 IPR005548 Cell division protein FtsQ/DivIB AM402_RS07460 dfe0f106f634e9db1b01f4cb0fbfcdfd 262 Pfam PF08478 POTRA domain, FtsQ-type 57 126 2.5E-21 T 06-07-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type AM402_RS07460 dfe0f106f634e9db1b01f4cb0fbfcdfd 262 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 24.004 T 06-07-2017 IPR026579 Cell division protein FtsQ GO:0090529 AM402_RS05070 82f1cc7712c2bbf90e7f8ca3419e7549 260 Gene3D G3DSA:3.40.50.700 37 159 1.2E-25 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05070 82f1cc7712c2bbf90e7f8ca3419e7549 260 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 47 155 9.8E-22 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05070 82f1cc7712c2bbf90e7f8ca3419e7549 260 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 130 146 - T 06-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05070 82f1cc7712c2bbf90e7f8ca3419e7549 260 SUPERFAMILY SSF56770 35 168 2.35E-48 T 06-07-2017 AM402_RS14340 9f1a6b969c62a4428e919536227a2136 303 Pfam PF01636 Phosphotransferase enzyme family 37 232 7.8E-11 T 06-07-2017 IPR002575 Aminoglycoside phosphotransferase AM402_RS14340 9f1a6b969c62a4428e919536227a2136 303 SUPERFAMILY SSF56112 7 300 1.12E-29 T 06-07-2017 IPR011009 Protein kinase-like domain AM402_RS14340 9f1a6b969c62a4428e919536227a2136 303 Gene3D G3DSA:3.90.1200.10 78 284 3.3E-15 T 06-07-2017 AM402_RS03605 816f568bd4cbc4e5197c845a6bd90bc3 293 Pfam PF00892 EamA-like transporter family 16 137 4.8E-9 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS03605 816f568bd4cbc4e5197c845a6bd90bc3 293 Pfam PF00892 EamA-like transporter family 149 280 3.5E-14 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS03605 816f568bd4cbc4e5197c845a6bd90bc3 293 SUPERFAMILY SSF103481 42 140 2.75E-8 T 06-07-2017 AM402_RS03605 816f568bd4cbc4e5197c845a6bd90bc3 293 SUPERFAMILY SSF103481 190 283 1.1E-12 T 06-07-2017 AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 SUPERFAMILY SSF48557 2 458 2.21E-142 T 06-07-2017 IPR008948 L-Aspartase-like GO:0003824 AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 Pfam PF00206 Lyase 13 345 1.7E-111 T 06-07-2017 IPR022761 Fumarate lyase, N-terminal AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 Gene3D G3DSA:1.10.40.30 411 462 7.8E-20 T 06-07-2017 AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 06-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 Gene3D G3DSA:1.20.200.10 143 403 1.0E-86 T 06-07-2017 AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 Pfam PF10415 Fumarase C C-terminus 411 462 1.1E-17 T 06-07-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 5.1E-27 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 5.1E-27 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 5.1E-27 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 5.1E-27 T 06-07-2017 IPR000362 Fumarate lyase family AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 Gene3D G3DSA:1.10.275.10 4 142 1.6E-57 T 06-07-2017 IPR024083 Fumarase/histidase, N-terminal AM402_RS04940 0cda4f798efb9cd31e9210f396d51868 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 473 9.8E-261 T 06-07-2017 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AM402_RS03620 8d50b71cd7dfa0447e85fdb36e81c1dc 122 Pfam PF02635 DsrE/DsrF-like family 6 122 1.3E-21 T 06-07-2017 IPR003787 Sulphur relay, DsrE/F-like protein AM402_RS03620 8d50b71cd7dfa0447e85fdb36e81c1dc 122 Gene3D G3DSA:3.40.1260.10 4 122 6.8E-46 T 06-07-2017 IPR027396 DsrEFH-like AM402_RS03620 8d50b71cd7dfa0447e85fdb36e81c1dc 122 SUPERFAMILY SSF75169 4 122 2.75E-35 T 06-07-2017 IPR027396 DsrEFH-like AM402_RS03620 8d50b71cd7dfa0447e85fdb36e81c1dc 122 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 7 122 1.4E-45 T 06-07-2017 IPR017462 Sulphur relay, TusC/DsrF AM402_RS09130 73a559179758914fe98c6e38d2a8df16 181 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 38 180 7.9E-49 T 06-07-2017 AM402_RS09130 73a559179758914fe98c6e38d2a8df16 181 PIRSF PIRSF000216 11 181 3.5E-53 T 06-07-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09130 73a559179758914fe98c6e38d2a8df16 181 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 37 180 1.1E-51 T 06-07-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09130 73a559179758914fe98c6e38d2a8df16 181 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 138 156 - T 06-07-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09130 73a559179758914fe98c6e38d2a8df16 181 SUPERFAMILY SSF52833 30 180 2.46E-47 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS09130 73a559179758914fe98c6e38d2a8df16 181 Gene3D G3DSA:3.40.30.10 101 179 1.2E-9 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS21790 04b1bc7082dfc2da14c9fc654a0eb610 439 Pfam PF13751 Transposase DDE domain 364 436 4.5E-16 T 06-07-2017 IPR025668 Transposase DDE domain AM402_RS21790 04b1bc7082dfc2da14c9fc654a0eb610 439 Pfam PF05598 Transposase domain (DUF772) 55 124 2.8E-13 T 06-07-2017 IPR008490 Transposase InsH, N-terminal AM402_RS16420 5629acc9f9f0983e643f07522068c8fc 277 PRINTS PR01994 Antirepressor protein ANT signature 93 115 3.7E-34 T 06-07-2017 IPR018875 Antirepressor protein ANT, N-terminal AM402_RS16420 5629acc9f9f0983e643f07522068c8fc 277 PRINTS PR01994 Antirepressor protein ANT signature 26 47 3.7E-34 T 06-07-2017 IPR018875 Antirepressor protein ANT, N-terminal AM402_RS16420 5629acc9f9f0983e643f07522068c8fc 277 PRINTS PR01994 Antirepressor protein ANT signature 69 92 3.7E-34 T 06-07-2017 IPR018875 Antirepressor protein ANT, N-terminal AM402_RS16420 5629acc9f9f0983e643f07522068c8fc 277 Pfam PF10547 P22_AR N-terminal domain 8 117 2.4E-48 T 06-07-2017 IPR018875 Antirepressor protein ANT, N-terminal AM402_RS09240 33a614e689416dc3446a7d136c69614f 77 Gene3D G3DSA:2.30.30.100 21 77 5.7E-23 T 06-07-2017 AM402_RS09240 33a614e689416dc3446a7d136c69614f 77 SUPERFAMILY SSF50182 23 75 4.58E-12 T 06-07-2017 IPR010920 LSM domain AM402_RS09240 33a614e689416dc3446a7d136c69614f 77 Pfam PF06004 Bacterial protein of unknown function (DUF903) 26 74 1.7E-18 T 06-07-2017 IPR010305 Protein of unknown function DUF903 AM402_RS16845 7bf4d5b079dd6d38c58c4acd96021f31 317 Pfam PF03330 Lytic transglycolase 78 155 1.5E-10 T 06-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM402_RS16845 7bf4d5b079dd6d38c58c4acd96021f31 317 Gene3D G3DSA:3.30.70.1070 245 315 6.1E-16 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS16845 7bf4d5b079dd6d38c58c4acd96021f31 317 SUPERFAMILY SSF110997 246 315 2.22E-14 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS16845 7bf4d5b079dd6d38c58c4acd96021f31 317 Pfam PF05036 Sporulation related domain 245 315 1.1E-14 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS10325 ac71d4d1fac8eebab3efa0d8e7b137e1 85 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 10 57 3.3E-17 T 06-07-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) AM402_RS12430 3e88be8ec6d4e9d9e0b6132f7bbc6384 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 144 4.4E-49 T 06-07-2017 IPR003791 Protein of unknown function UPF0178 AM402_RS12430 3e88be8ec6d4e9d9e0b6132f7bbc6384 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.907 T 06-07-2017 IPR003791 Protein of unknown function UPF0178 AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 SUPERFAMILY SSF51306 78 321 6.28E-70 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 9.0E-25 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 9.0E-25 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 263 282 9.0E-25 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 Gene3D G3DSA:2.10.109.10 263 309 9.4E-55 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 Gene3D G3DSA:2.10.109.10 77 154 9.4E-55 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 259 303 3.5E-16 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 160 2.1E-25 T 06-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 Gene3D G3DSA:2.170.230.10 155 262 1.2E-23 T 06-07-2017 IPR019766 Peptidase S26A, all-beta subdomain AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 Pfam PF00717 Peptidase S24-like 86 158 2.0E-20 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 06-07-2017 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 Pfam PF10502 Signal peptidase, peptidase S26 259 301 8.6E-6 T 06-07-2017 IPR019533 Peptidase S26 AM402_RS08410 f01a0e5945c8bb7a292eefbdbc17f310 323 ProSitePatterns PS00761 Signal peptidases I signature 3. 268 281 - T 06-07-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AM402_RS10860 0e81a211940d04c3503b7d9cd6238cf8 163 SUPERFAMILY SSF103642 140 159 1.1E-7 T 06-07-2017 AM402_RS10860 0e81a211940d04c3503b7d9cd6238cf8 163 Gene3D G3DSA:3.10.450.50 7 159 3.9E-55 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS10860 0e81a211940d04c3503b7d9cd6238cf8 163 SUPERFAMILY SSF54427 31 137 6.75E-35 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS10860 0e81a211940d04c3503b7d9cd6238cf8 163 Pfam PF02810 SEC-C motif 9 25 1.2E-4 T 06-07-2017 IPR004027 SEC-C motif AM402_RS10860 0e81a211940d04c3503b7d9cd6238cf8 163 Pfam PF02810 SEC-C motif 142 159 1.6E-10 T 06-07-2017 IPR004027 SEC-C motif AM402_RS10860 0e81a211940d04c3503b7d9cd6238cf8 163 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 7 136 27.268 T 06-07-2017 IPR023006 Uncharacterised protein family UPF0225 AM402_RS18805 e36b6f406f066f3be843dda9fe028fe6 291 Gene3D G3DSA:3.10.129.10 124 285 9.2E-52 T 06-07-2017 IPR029069 HotDog domain AM402_RS18805 e36b6f406f066f3be843dda9fe028fe6 291 Gene3D G3DSA:3.10.129.10 5 116 2.0E-46 T 06-07-2017 IPR029069 HotDog domain AM402_RS18805 e36b6f406f066f3be843dda9fe028fe6 291 SUPERFAMILY SSF54637 116 285 1.14E-55 T 06-07-2017 IPR029069 HotDog domain AM402_RS18805 e36b6f406f066f3be843dda9fe028fe6 291 Pfam PF13622 Thioesterase-like superfamily 33 282 2.6E-56 T 06-07-2017 AM402_RS18805 e36b6f406f066f3be843dda9fe028fe6 291 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 13 283 2.7E-95 T 06-07-2017 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-75105 AM402_RS18805 e36b6f406f066f3be843dda9fe028fe6 291 SUPERFAMILY SSF54637 6 114 4.85E-39 T 06-07-2017 IPR029069 HotDog domain AM402_RS05995 f0b0fd2b7cb64a03f01309abbf07ae8a 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.081 T 06-07-2017 IPR023065 Uncharacterised protein family ApaG AM402_RS05995 f0b0fd2b7cb64a03f01309abbf07ae8a 125 Gene3D G3DSA:2.60.40.1470 4 124 1.5E-46 T 06-07-2017 IPR007474 ApaG domain AM402_RS05995 f0b0fd2b7cb64a03f01309abbf07ae8a 125 SUPERFAMILY SSF110069 3 125 8.24E-47 T 06-07-2017 IPR007474 ApaG domain AM402_RS05995 f0b0fd2b7cb64a03f01309abbf07ae8a 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 2.4E-34 T 06-07-2017 IPR007474 ApaG domain AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 Gene3D G3DSA:3.30.1120.10 408 419 4.3E-26 T 06-07-2017 AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 Gene3D G3DSA:3.30.1120.10 458 525 4.3E-26 T 06-07-2017 AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 Gene3D G3DSA:3.40.720.10 33 406 3.1E-95 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 ProSitePatterns PS00149 Sulfatases signature 2. 152 162 - T 06-07-2017 IPR024607 Sulfatase, conserved site AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 ProSitePatterns PS00523 Sulfatases signature 1. 107 119 - T 06-07-2017 IPR024607 Sulfatase, conserved site AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 SUPERFAMILY SSF53649 33 53 3.14E-107 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 SUPERFAMILY SSF53649 80 422 3.14E-107 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 SUPERFAMILY SSF53649 458 516 3.14E-107 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS07090 b8ce2610d2b24a3f73059ff50c4f79f7 536 Pfam PF00884 Sulfatase 35 385 1.5E-68 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM402_RS06495 521cdadd164b1093ebf9314a5a25604d 350 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 06-07-2017 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AM402_RS06495 521cdadd164b1093ebf9314a5a25604d 350 SUPERFAMILY SSF55120 4 338 2.59E-102 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06495 521cdadd164b1093ebf9314a5a25604d 350 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 28.451 T 06-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06495 521cdadd164b1093ebf9314a5a25604d 350 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 10 291 7.8E-73 T 06-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06495 521cdadd164b1093ebf9314a5a25604d 350 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 189 337 1.5E-17 T 06-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS06495 521cdadd164b1093ebf9314a5a25604d 350 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 10 168 4.3E-42 T 06-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 Pfam PF01343 Peptidase family S49 395 545 4.5E-44 T 06-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 Pfam PF01343 Peptidase family S49 140 292 7.8E-34 T 06-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 Gene3D G3DSA:3.90.226.10 472 557 6.7E-64 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 Gene3D G3DSA:3.90.226.10 30 176 1.5E-61 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 Gene3D G3DSA:3.90.226.10 219 315 1.5E-61 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 Gene3D G3DSA:3.90.226.10 324 435 6.7E-64 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 SUPERFAMILY SSF52096 471 533 1.57E-39 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 SUPERFAMILY SSF52096 322 443 1.57E-39 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 330 544 8.1E-50 T 06-07-2017 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 6.9E-203 T 06-07-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 SUPERFAMILY SSF52096 211 285 5.22E-22 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 SUPERFAMILY SSF52096 32 180 5.22E-22 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS10820 5ca9d33e0e2b2168640075e8d809d2fb 618 PIRSF PIRSF001217 8 618 1.3E-210 T 06-07-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AM402_RS08455 0a7924643beaf9377b80f067c24aab39 357 SUPERFAMILY SSF49401 217 355 6.96E-18 T 06-07-2017 IPR008966 Adhesion domain AM402_RS08455 0a7924643beaf9377b80f067c24aab39 357 Gene3D G3DSA:2.60.40.1090 223 352 2.4E-7 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08455 0a7924643beaf9377b80f067c24aab39 357 Pfam PF00419 Fimbrial protein 211 356 1.7E-22 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS09315 79b1cb24de234e2ea3abc6082e679b7a 271 Pfam PF03589 Antitermination protein 179 262 1.1E-23 T 06-07-2017 IPR003222 Antitermination protein GO:0003677|GO:0006355 AM402_RS09315 79b1cb24de234e2ea3abc6082e679b7a 271 Pfam PF03589 Antitermination protein 26 109 1.0E-11 T 06-07-2017 IPR003222 Antitermination protein GO:0003677|GO:0006355 AM402_RS09315 79b1cb24de234e2ea3abc6082e679b7a 271 SUPERFAMILY SSF57938 168 218 3.4E-6 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM402_RS10175 e7edc7adcf8fd3578da03d198631894a 156 PIRSF PIRSF000239 1 142 2.3E-21 T 06-07-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS10175 e7edc7adcf8fd3578da03d198631894a 156 SUPERFAMILY SSF52833 3 139 3.24E-49 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS10175 e7edc7adcf8fd3578da03d198631894a 156 Pfam PF00578 AhpC/TSA family 7 134 4.6E-41 T 06-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM402_RS10175 e7edc7adcf8fd3578da03d198631894a 156 Gene3D G3DSA:3.40.30.10 2 143 4.9E-50 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 Pfam PF02254 TrkA-N domain 235 350 8.4E-25 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 Pfam PF02254 TrkA-N domain 3 112 2.1E-29 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 Gene3D G3DSA:3.40.50.720 233 376 3.1E-36 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 Gene3D G3DSA:3.40.50.720 1 152 7.6E-50 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 SUPERFAMILY SSF116726 148 226 1.09E-9 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 SUPERFAMILY SSF51735 1 152 1.05E-35 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 Gene3D G3DSA:3.30.70.1450 391 437 5.5E-4 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.6E-35 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.6E-35 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.6E-35 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.6E-35 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.6E-35 T 06-07-2017 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 SUPERFAMILY SSF116726 390 450 3.92E-7 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 SUPERFAMILY SSF51735 232 376 3.29E-32 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 Pfam PF02080 TrkA-C domain 156 225 9.9E-11 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS00855 38d9e5c9bb087a319f07fd7e200a15d5 458 Pfam PF02080 TrkA-C domain 391 451 6.7E-10 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS03730 8198689d3b04954b680116cad1ee0dd2 261 Gene3D G3DSA:3.90.79.10 94 250 2.1E-40 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS03730 8198689d3b04954b680116cad1ee0dd2 261 Pfam PF00293 NUDIX domain 133 245 9.4E-16 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS03730 8198689d3b04954b680116cad1ee0dd2 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 2 259 41.63 T 06-07-2017 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AM402_RS03730 8198689d3b04954b680116cad1ee0dd2 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 94 125 2.8E-10 T 06-07-2017 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AM402_RS03730 8198689d3b04954b680116cad1ee0dd2 261 ProSitePatterns PS00893 Nudix box signature. 161 182 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM402_RS03730 8198689d3b04954b680116cad1ee0dd2 261 SUPERFAMILY SSF55811 80 243 1.68E-39 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS03730 8198689d3b04954b680116cad1ee0dd2 261 SUPERFAMILY SSF55811 5 97 5.88E-25 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS20300 f2159d9d7810ae604017b4f4c8d6053d 261 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 1.6E-74 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM402_RS20300 f2159d9d7810ae604017b4f4c8d6053d 261 ProSitePatterns PS01218 TatC family signature. 154 173 - T 06-07-2017 IPR019820 Sec-independent periplasmic protein translocase, conserved site AM402_RS20300 f2159d9d7810ae604017b4f4c8d6053d 261 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 243 17.944 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM402_RS20300 f2159d9d7810ae604017b4f4c8d6053d 261 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 4.6E-65 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM402_RS20300 f2159d9d7810ae604017b4f4c8d6053d 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 4.5E-50 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM402_RS20300 f2159d9d7810ae604017b4f4c8d6053d 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 4.5E-50 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM402_RS20300 f2159d9d7810ae604017b4f4c8d6053d 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 4.5E-50 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM402_RS20300 f2159d9d7810ae604017b4f4c8d6053d 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 4.5E-50 T 06-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 Pfam PF01568 Molydopterin dinucleotide binding domain 643 749 4.3E-15 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 Pfam PF00384 Molybdopterin oxidoreductase 114 490 3.3E-27 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 SUPERFAMILY SSF50692 640 755 6.56E-18 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 SUPERFAMILY SSF53706 52 626 1.31E-147 T 06-07-2017 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 Gene3D G3DSA:3.40.50.740 114 187 2.8E-51 T 06-07-2017 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 Gene3D G3DSA:3.40.50.740 395 625 2.8E-51 T 06-07-2017 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 Gene3D G3DSA:2.40.40.20 641 754 3.9E-12 T 06-07-2017 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 PIRSF PIRSF000144 1 760 0.0 T 06-07-2017 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 Gene3D G3DSA:3.40.228.10 188 394 2.0E-58 T 06-07-2017 AM402_RS05785 3ebcf99324c95aca78afce6cf7a892f0 761 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 18 753 6.5E-290 T 06-07-2017 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AM402_RS17705 e4215c245c4a6650462fdd854700abe0 196 Pfam PF11198 Protein of unknown function (DUF2857) 10 181 1.1E-58 T 06-07-2017 IPR021364 Protein of unknown function DUF2857 AM402_RS21315 850ed3636791f1d334ad056c66779d51 220 SUPERFAMILY SSF52540 1 199 2.76E-22 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21315 850ed3636791f1d334ad056c66779d51 220 PIRSF PIRSF009320 1 219 4.1E-33 T 06-07-2017 AM402_RS21315 850ed3636791f1d334ad056c66779d51 220 Gene3D G3DSA:3.40.50.300 1 218 2.1E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21315 850ed3636791f1d334ad056c66779d51 220 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 165 5.2E-13 T 06-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM402_RS15850 ac715ef0b2e9bc07f665505b6572e6d5 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 59 441 9.4E-108 T 06-07-2017 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AM402_RS15850 ac715ef0b2e9bc07f665505b6572e6d5 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 4 450 1.6E-77 T 06-07-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 SUPERFAMILY SSF52540 322 555 2.66E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 SUPERFAMILY SSF90123 12 318 8.89E-44 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 Pfam PF00664 ABC transporter transmembrane region 24 278 7.0E-10 T 06-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 Gene3D G3DSA:1.20.1560.10 11 316 2.0E-38 T 06-07-2017 AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 Pfam PF00005 ABC transporter 348 495 5.7E-29 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 15 557 8.8E-222 T 06-07-2017 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 SMART SM00382 357 561 2.2E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS18090 e934a27f61905cd6730cd5beba537307 579 Gene3D G3DSA:3.40.50.300 343 559 5.6E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09695 5a0868836ee2c50e33097e258cab4e68 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site AM402_RS09695 5a0868836ee2c50e33097e258cab4e68 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 5.9E-43 T 06-07-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AM402_RS09695 5a0868836ee2c50e33097e258cab4e68 137 PIRSF PIRSF002889 1 137 1.9E-43 T 06-07-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AM402_RS09695 5a0868836ee2c50e33097e258cab4e68 137 Pfam PF00460 Flagella basal body rod protein 11 39 5.6E-10 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM402_RS16965 33cced95745945025c19223d24b44ee4 367 SMART SM00967 130 205 6.5E-5 T 06-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AM402_RS16965 33cced95745945025c19223d24b44ee4 367 SUPERFAMILY SSF55315 128 200 1.65E-8 T 06-07-2017 IPR029064 50S ribosomal protein L30e-like AM402_RS16965 33cced95745945025c19223d24b44ee4 367 Gene3D G3DSA:3.40.1280.10 211 365 1.8E-42 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM402_RS16965 33cced95745945025c19223d24b44ee4 367 SUPERFAMILY SSF75217 209 366 1.24E-40 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases AM402_RS16965 33cced95745945025c19223d24b44ee4 367 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 131 201 9.7E-11 T 06-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AM402_RS16965 33cced95745945025c19223d24b44ee4 367 Gene3D G3DSA:3.30.1330.30 127 199 1.9E-7 T 06-07-2017 IPR029064 50S ribosomal protein L30e-like AM402_RS16965 33cced95745945025c19223d24b44ee4 367 PIRSF PIRSF006280 1 367 4.9E-146 T 06-07-2017 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 AM402_RS16965 33cced95745945025c19223d24b44ee4 367 Pfam PF00588 SpoU rRNA Methylase family 220 358 4.0E-31 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM402_RS14130 7e8b0c6a3ce5172c7d728125ffca893b 111 SUPERFAMILY SSF141488 28 101 3.92E-12 T 06-07-2017 IPR018660 C-type lysozyme, inhibitor AM402_RS14130 7e8b0c6a3ce5172c7d728125ffca893b 111 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 101 3.2E-12 T 06-07-2017 IPR018660 C-type lysozyme, inhibitor AM402_RS15755 3c9ebb758e737fbd57687174ffae5ca7 231 Pfam PF04172 LrgB-like family 12 224 1.6E-77 T 06-07-2017 IPR007300 CidB/LrgB family AM402_RS15755 3c9ebb758e737fbd57687174ffae5ca7 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 3 226 1.5E-94 T 06-07-2017 IPR005261 Conserved hypothetical protein CHP00659 AM402_RS06920 c1675e94f0be6589e8e19961141020d5 343 Pfam PF10554 Ash protein family 186 292 4.4E-30 T 06-07-2017 IPR018880 Bacteriophage P4, Ash protein AM402_RS00205 0ed6ee50e0783f2869e0b350def8b963 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 06-07-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00205 0ed6ee50e0783f2869e0b350def8b963 102 SUPERFAMILY SSF141091 1 101 3.66E-38 T 06-07-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00205 0ed6ee50e0783f2869e0b350def8b963 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 8.5E-40 T 06-07-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00205 0ed6ee50e0783f2869e0b350def8b963 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.429 T 06-07-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00205 0ed6ee50e0783f2869e0b350def8b963 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.8E-43 T 06-07-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS18395 015e790d876052f9ca7c1b8869b6e275 460 Pfam PF00939 Sodium:sulfate symporter transmembrane region 23 459 4.4E-58 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM402_RS18395 015e790d876052f9ca7c1b8869b6e275 460 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 42 459 5.3E-118 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM402_RS18395 015e790d876052f9ca7c1b8869b6e275 460 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 409 425 - T 06-07-2017 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 SUPERFAMILY SSF53041 2 138 1.96E-39 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 SMART SM00857 3 139 1.4E-45 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 06-07-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 Pfam PF02796 Helix-turn-helix domain of resolvase 141 181 8.9E-10 T 06-07-2017 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 06-07-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 SUPERFAMILY SSF46689 141 181 8.96E-9 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 Pfam PF00239 Resolvase, N terminal domain 4 138 9.5E-37 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 Gene3D G3DSA:1.10.10.60 139 182 2.9E-19 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17900 18bcc8093bed5e6f9d5d31a63d0d69c9 183 Gene3D G3DSA:3.40.50.1390 2 122 8.5E-38 T 06-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM402_RS10895 1e8d9475571538230f9bc30894c61918 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 205 2.0E-71 T 06-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM402_RS10895 1e8d9475571538230f9bc30894c61918 214 Pfam PF01914 MarC family integral membrane protein 9 209 9.1E-64 T 06-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM402_RS21140 938d9e8c0b57bb93394b1a2dd1a3cf9e 497 Pfam PF04986 Putative transposase 171 393 8.8E-58 T 06-07-2017 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 AM402_RS21140 938d9e8c0b57bb93394b1a2dd1a3cf9e 497 Pfam PF14319 Transposase zinc-binding domain 39 142 1.0E-25 T 06-07-2017 IPR026889 Transposase zinc-binding domain AM402_RS16735 e2e23cf65130b7df848e3adb1a7e56d6 353 Pfam PF02562 PhoH-like protein 124 327 9.5E-96 T 06-07-2017 IPR003714 PhoH-like protein GO:0005524 AM402_RS16735 e2e23cf65130b7df848e3adb1a7e56d6 353 Gene3D G3DSA:3.40.50.300 124 327 2.6E-88 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16735 e2e23cf65130b7df848e3adb1a7e56d6 353 SUPERFAMILY SSF52540 46 92 4.42E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16735 e2e23cf65130b7df848e3adb1a7e56d6 353 SUPERFAMILY SSF52540 123 299 4.42E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15470 2985a08770f8398cf82eb5201d893206 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.4E-107 T 06-07-2017 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 AM402_RS15470 2985a08770f8398cf82eb5201d893206 246 Gene3D G3DSA:3.80.30.10 69 246 8.4E-71 T 06-07-2017 AM402_RS15470 2985a08770f8398cf82eb5201d893206 246 Pfam PF13353 4Fe-4S single cluster domain 16 150 5.0E-19 T 06-07-2017 AM402_RS15470 2985a08770f8398cf82eb5201d893206 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 06-07-2017 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AM402_RS15470 2985a08770f8398cf82eb5201d893206 246 Pfam PF04055 Radical SAM superfamily 24 178 9.0E-33 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS15470 2985a08770f8398cf82eb5201d893206 246 SUPERFAMILY SSF102114 23 212 2.55E-24 T 06-07-2017 AM402_RS04165 97b265b53bfbd4466a9ad1a673d4fadc 137 Gene3D G3DSA:3.30.1460.10 1 132 3.4E-40 T 06-07-2017 AM402_RS04165 97b265b53bfbd4466a9ad1a673d4fadc 137 Pfam PF03519 Invasion protein B family 26 95 1.3E-15 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK AM402_RS04165 97b265b53bfbd4466a9ad1a673d4fadc 137 SUPERFAMILY SSF69635 1 130 7.61E-26 T 06-07-2017 AM402_RS04165 97b265b53bfbd4466a9ad1a673d4fadc 137 PRINTS PR01305 Invasion protein B family signature 113 125 8.4E-5 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK AM402_RS04165 97b265b53bfbd4466a9ad1a673d4fadc 137 PRINTS PR01305 Invasion protein B family signature 32 42 8.4E-5 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK AM402_RS04165 97b265b53bfbd4466a9ad1a673d4fadc 137 PRINTS PR01305 Invasion protein B family signature 42 56 8.4E-5 T 06-07-2017 IPR003065 Surface presentation of antigens protein SpaK AM402_RS03950 84d3a1fe0d838956b2ab66a80711b2fe 286 Gene3D G3DSA:1.10.3720.10 2 272 2.6E-47 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03950 84d3a1fe0d838956b2ab66a80711b2fe 286 SUPERFAMILY SSF161098 6 275 1.5E-52 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03950 84d3a1fe0d838956b2ab66a80711b2fe 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 284 1.9E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18490 50df3e7de3396ec681e984ebf2035a64 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 4.2E-111 T 06-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM402_RS18490 50df3e7de3396ec681e984ebf2035a64 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 1.0E-102 T 06-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM402_RS18490 50df3e7de3396ec681e984ebf2035a64 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 40.448 T 06-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM402_RS18490 50df3e7de3396ec681e984ebf2035a64 263 PIRSF PIRSF000388 1 263 3.2E-94 T 06-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM402_RS18490 50df3e7de3396ec681e984ebf2035a64 263 SUPERFAMILY SSF51621 4 262 2.55E-100 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS18490 50df3e7de3396ec681e984ebf2035a64 263 Gene3D G3DSA:3.20.20.60 1 262 3.4E-106 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS16255 4829b0fcd12ca7e1cd65514b1c8fe308 110 PIRSF PIRSF039032 1 110 1.3E-37 T 06-07-2017 IPR009387 Toxin HigB-2 AM402_RS16255 4829b0fcd12ca7e1cd65514b1c8fe308 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 47 106 1.4E-7 T 06-07-2017 IPR009387 Toxin HigB-2 AM402_RS00630 a17ad227b9b117d52174d68f7d1257a8 454 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 38.236 T 06-07-2017 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 AM402_RS00630 a17ad227b9b117d52174d68f7d1257a8 454 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 440 1.7E-256 T 06-07-2017 AM402_RS17075 3f419d9cdd7c4596651c6ae791083a7f 181 Gene3D G3DSA:2.30.30.240 105 181 5.4E-29 T 06-07-2017 AM402_RS17075 3f419d9cdd7c4596651c6ae791083a7f 181 SUPERFAMILY SSF50447 13 100 1.06E-24 T 06-07-2017 IPR009000 Translation protein, beta-barrel domain AM402_RS17075 3f419d9cdd7c4596651c6ae791083a7f 181 Pfam PF05239 PRC-barrel domain 103 176 1.8E-8 T 06-07-2017 IPR027275 PRC-barrel domain AM402_RS17075 3f419d9cdd7c4596651c6ae791083a7f 181 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 181 2.2E-56 T 06-07-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM402_RS17075 3f419d9cdd7c4596651c6ae791083a7f 181 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 181 24.378 T 06-07-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM402_RS17075 3f419d9cdd7c4596651c6ae791083a7f 181 SUPERFAMILY SSF50346 105 181 1.61E-18 T 06-07-2017 IPR011033 PRC-barrel-like AM402_RS17075 3f419d9cdd7c4596651c6ae791083a7f 181 Pfam PF01782 RimM N-terminal domain 16 96 5.3E-26 T 06-07-2017 IPR002676 RimM protein GO:0006364 AM402_RS17075 3f419d9cdd7c4596651c6ae791083a7f 181 Gene3D G3DSA:2.40.30.60 7 100 2.0E-34 T 06-07-2017 IPR002676 RimM protein GO:0006364 AM402_RS09685 2c91760494f6c677d50147c3c317ea4a 99 SUPERFAMILY SSF101498 12 91 1.29E-12 T 06-07-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM402_RS09685 2c91760494f6c677d50147c3c317ea4a 99 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 92 5.7E-18 T 06-07-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM402_RS09685 2c91760494f6c677d50147c3c317ea4a 99 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 89 5.4E-11 T 06-07-2017 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 SUPERFAMILY SSF53850 81 266 1.46E-12 T 06-07-2017 AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 Gene3D G3DSA:1.10.10.10 2 85 4.8E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 SUPERFAMILY SSF46785 2 85 6.54E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-9 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 Gene3D G3DSA:3.40.190.10 90 175 3.5E-7 T 06-07-2017 AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 Pfam PF03466 LysR substrate binding domain 86 266 1.0E-11 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS00770 1b602413f0a898acf0be690b48f5cd59 274 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-18 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS15580 897739b710236679d38929c836f0faba 242 Gene3D G3DSA:3.40.50.300 3 235 5.0E-74 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15580 897739b710236679d38929c836f0faba 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15580 897739b710236679d38929c836f0faba 242 Pfam PF00005 ABC transporter 19 170 2.1E-34 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15580 897739b710236679d38929c836f0faba 242 SMART SM00382 27 218 2.5E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS15580 897739b710236679d38929c836f0faba 242 PIRSF PIRSF039085 1 242 7.1E-87 T 06-07-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM402_RS15580 897739b710236679d38929c836f0faba 242 SUPERFAMILY SSF52540 3 233 5.32E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02950 8e6a45a5dc1103d13949d9f650013fe2 350 SUPERFAMILY SSF50939 215 346 2.8E-49 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM402_RS02950 8e6a45a5dc1103d13949d9f650013fe2 350 SUPERFAMILY SSF50939 19 182 2.8E-49 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM402_RS02950 8e6a45a5dc1103d13949d9f650013fe2 350 Gene3D G3DSA:2.120.10.10 16 346 2.2E-66 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM402_RS02950 8e6a45a5dc1103d13949d9f650013fe2 350 Pfam PF13088 BNR repeat-like domain 35 332 2.0E-73 T 06-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AM402_RS08245 546358cbfcff4f9a09b84d4cfea89a33 231 Pfam PF06551 Protein of unknown function (DUF1120) 27 108 1.8E-4 T 06-07-2017 IPR010546 Protein of unknown function DUF1120 AM402_RS12680 f21774c45b27666d213740d3835485ef 302 Pfam PF03547 Membrane transport protein 159 295 1.2E-8 T 06-07-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM402_RS21550 b890569f77e49ee18b69d01bd733409d 116 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 12 106 1.0E-24 T 06-07-2017 IPR009241 Toxin HigB-like AM402_RS14380 7dffe69d89aa98320b02993329510562 275 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 264 5.8E-103 T 06-07-2017 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AM402_RS14380 7dffe69d89aa98320b02993329510562 275 SUPERFAMILY SSF56752 1 260 1.01E-68 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM402_RS14380 7dffe69d89aa98320b02993329510562 275 Gene3D G3DSA:3.30.470.10 1 107 1.8E-32 T 06-07-2017 AM402_RS14380 7dffe69d89aa98320b02993329510562 275 Pfam PF01063 Amino-transferase class IV 24 248 2.0E-50 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM402_RS14380 7dffe69d89aa98320b02993329510562 275 Gene3D G3DSA:3.20.10.10 124 255 6.8E-39 T 06-07-2017 AM402_RS09060 1e44ffe79e9ded66fe3b1dba6a87b441 47 PRINTS PR00281 Hok/Gef cell toxic protein family signature 4 22 3.7E-7 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS09060 1e44ffe79e9ded66fe3b1dba6a87b441 47 PRINTS PR00281 Hok/Gef cell toxic protein family signature 24 46 3.7E-7 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS09060 1e44ffe79e9ded66fe3b1dba6a87b441 47 Pfam PF01848 Hok/gef family 5 45 4.8E-15 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS09060 1e44ffe79e9ded66fe3b1dba6a87b441 47 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 6 46 0.001 T 06-07-2017 IPR000021 Hok/gef cell toxic protein GO:0016020 AM402_RS12475 a7034598f150719334e5cc341f33792a 181 Gene3D G3DSA:3.40.630.30 3 179 1.5E-43 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS12475 a7034598f150719334e5cc341f33792a 181 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 1.9E-28 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS12475 a7034598f150719334e5cc341f33792a 181 SUPERFAMILY SSF55729 3 164 3.01E-36 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS06245 e231ec700da097a5712935a3285829c5 241 SUPERFAMILY SSF52313 6 234 2.09E-96 T 06-07-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain AM402_RS06245 e231ec700da097a5712935a3285829c5 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.671 T 06-07-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 Pfam PF00318 Ribosomal protein S2 9 224 6.0E-95 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 Gene3D G3DSA:1.10.287.610 100 152 1.6E-26 T 06-07-2017 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 3.0E-108 T 06-07-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 06-07-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 06-07-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 Gene3D G3DSA:3.40.50.10490 23 99 3.4E-68 T 06-07-2017 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 Gene3D G3DSA:3.40.50.10490 158 235 3.4E-68 T 06-07-2017 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.3E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.3E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.3E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.3E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.3E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS06245 e231ec700da097a5712935a3285829c5 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.3E-38 T 06-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS20265 9739f2e2084d750f37518b10977370f3 444 Pfam PF00557 Metallopeptidase family M24 169 431 1.4E-44 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS20265 9739f2e2084d750f37518b10977370f3 444 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 336 348 - T 06-07-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM402_RS20265 9739f2e2084d750f37518b10977370f3 444 Gene3D G3DSA:3.90.230.10 162 439 3.1E-53 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS20265 9739f2e2084d750f37518b10977370f3 444 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 444 56.362 T 06-07-2017 IPR022846 Xaa-Pro dipeptidase GO:0016795 AM402_RS20265 9739f2e2084d750f37518b10977370f3 444 SUPERFAMILY SSF55920 164 439 6.28E-56 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS17460 97bb58aa32eb668353b55374d7357433 203 SUPERFAMILY SSF52266 19 197 5.5E-18 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS17460 97bb58aa32eb668353b55374d7357433 203 Gene3D G3DSA:3.40.50.1110 19 196 1.6E-16 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS17460 97bb58aa32eb668353b55374d7357433 203 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 24 191 1.1E-9 T 06-07-2017 IPR001087 GDSL lipase/esterase GO:0016788 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 Pfam PF00072 Response regulator receiver domain 6 115 3.3E-23 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 Gene3D G3DSA:3.40.50.2300 3 147 4.9E-32 T 06-07-2017 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 198 4.0E-22 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 SMART SM00448 4 117 2.7E-26 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 9.0E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 9.0E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 9.0E-15 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 SMART SM00421 145 202 2.5E-21 T 06-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 SUPERFAMILY SSF46894 128 205 1.67E-20 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 Gene3D G3DSA:1.10.10.10 148 205 9.7E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS10245 ee647283847ab4abfc8b07e4f3466975 207 SUPERFAMILY SSF52172 3 133 3.98E-30 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS11000 e96984bce36998615ac150c550c9ad8c 185 Gene3D G3DSA:2.60.40.1090 40 184 1.5E-34 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS11000 e96984bce36998615ac150c550c9ad8c 185 SUPERFAMILY SSF49401 40 184 1.64E-34 T 06-07-2017 IPR008966 Adhesion domain AM402_RS11000 e96984bce36998615ac150c550c9ad8c 185 Pfam PF00419 Fimbrial protein 43 184 3.6E-16 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS11125 6b5c1896c9ef5f0b4016212a5e288d4e 261 Pfam PF02562 PhoH-like protein 55 259 5.4E-78 T 06-07-2017 IPR003714 PhoH-like protein GO:0005524 AM402_RS11125 6b5c1896c9ef5f0b4016212a5e288d4e 261 SUPERFAMILY SSF52540 54 236 1.28E-32 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11125 6b5c1896c9ef5f0b4016212a5e288d4e 261 Gene3D G3DSA:3.40.50.300 55 259 2.6E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07305 3d03ee0a0b1573816a8ddd520345c3ac 243 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 235 1.0E-88 T 06-07-2017 IPR017746 Cellulose synthase operon protein BcsQ AM402_RS07305 3d03ee0a0b1573816a8ddd520345c3ac 243 Gene3D G3DSA:3.40.50.300 4 236 2.0E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07305 3d03ee0a0b1573816a8ddd520345c3ac 243 SUPERFAMILY SSF52540 1 237 4.89E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11585 0f3c21ba815a5d910272c9d6832c8c71 354 Pfam PF04233 Phage Mu protein F like protein 165 258 4.3E-6 T 06-07-2017 IPR006528 Phage head morphogenesis domain AM402_RS11585 0f3c21ba815a5d910272c9d6832c8c71 354 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 181 262 4.4E-12 T 06-07-2017 IPR006528 Phage head morphogenesis domain AM402_RS20330 fe9f763eb4954d8200c3ac294c0adc44 446 Pfam PF02646 RmuC family 138 433 2.4E-103 T 06-07-2017 IPR003798 DNA recombination RmuC AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 103 120 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 PRINTS PR00969 Pili chaperone signature 127 142 2.0E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 PRINTS PR00969 Pili chaperone signature 28 37 2.0E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 PRINTS PR00969 Pili chaperone signature 74 95 2.0E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 PRINTS PR00969 Pili chaperone signature 166 181 2.0E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 PRINTS PR00969 Pili chaperone signature 104 121 2.0E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 Gene3D G3DSA:2.60.40.1070 154 244 4.5E-27 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 SUPERFAMILY SSF49354 28 146 2.38E-39 T 06-07-2017 IPR008962 PapD-like AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 145 5.5E-37 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 Gene3D G3DSA:2.60.40.360 28 145 1.2E-44 T 06-07-2017 IPR008962 PapD-like AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 232 1.6E-15 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS18200 a0a82d0802f5a9ac168835b9e6afd1e5 252 SUPERFAMILY SSF49584 154 244 2.49E-22 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS09150 6923a4f79f187361191f6756f5c554d3 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.796 T 06-07-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09150 6923a4f79f187361191f6756f5c554d3 180 SUPERFAMILY SSF54862 33 152 5.86E-28 T 06-07-2017 AM402_RS09150 6923a4f79f187361191f6756f5c554d3 180 Gene3D G3DSA:3.30.70.20 27 117 1.1E-18 T 06-07-2017 AM402_RS09150 6923a4f79f187361191f6756f5c554d3 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 1.5E-50 T 06-07-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09150 6923a4f79f187361191f6756f5c554d3 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS09150 6923a4f79f187361191f6756f5c554d3 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS09150 6923a4f79f187361191f6756f5c554d3 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 6.9E-12 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS21875 05389f29e3a25048256efde8c2757bd8 115 Pfam PF00893 Small Multidrug Resistance protein 3 94 6.9E-32 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 AM402_RS21875 05389f29e3a25048256efde8c2757bd8 115 SUPERFAMILY SSF103481 5 107 1.44E-19 T 06-07-2017 AM402_RS03995 31fbba05fe6a0a013498a5d5f9cae3a7 311 SUPERFAMILY SSF103481 49 142 2.35E-6 T 06-07-2017 AM402_RS03995 31fbba05fe6a0a013498a5d5f9cae3a7 311 SUPERFAMILY SSF103481 197 292 2.48E-5 T 06-07-2017 AM402_RS03995 31fbba05fe6a0a013498a5d5f9cae3a7 311 Pfam PF00892 EamA-like transporter family 7 139 3.3E-6 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS01320 0340b1e6ab5784032bb6cdda4ff64b9c 382 Gene3D G3DSA:3.40.50.2000 149 296 3.1E-17 T 06-07-2017 AM402_RS01320 0340b1e6ab5784032bb6cdda4ff64b9c 382 Pfam PF00534 Glycosyl transferases group 1 168 307 1.2E-25 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS01320 0340b1e6ab5784032bb6cdda4ff64b9c 382 SUPERFAMILY SSF53756 334 378 8.64E-42 T 06-07-2017 AM402_RS01320 0340b1e6ab5784032bb6cdda4ff64b9c 382 SUPERFAMILY SSF53756 3 299 8.64E-42 T 06-07-2017 AM402_RS01390 31d4bba2960dd698dcf23de4fdde5ff8 542 Pfam PF12571 Phage tail-collar fibre protein 1 149 2.2E-60 T 06-07-2017 IPR022225 Phage tail fibre protein AM402_RS10865 8924332042129c326cef339548bca3a2 339 SMART SM00448 8 121 1.4E-21 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS10865 8924332042129c326cef339548bca3a2 339 Gene3D G3DSA:3.40.50.2300 7 125 1.9E-25 T 06-07-2017 AM402_RS10865 8924332042129c326cef339548bca3a2 339 Hamap MF_00958 Regulator of RpoS [rssB]. 1 336 51.882 T 06-07-2017 IPR028616 Regulator of RpoS AM402_RS10865 8924332042129c326cef339548bca3a2 339 Pfam PF00072 Response regulator receiver domain 10 121 1.9E-21 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS10865 8924332042129c326cef339548bca3a2 339 SUPERFAMILY SSF52172 8 133 2.85E-26 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS05755 7ca9541a5cba241df53d2fe00a70a1b9 192 Gene3D G3DSA:2.60.60.30 19 184 1.5E-74 T 06-07-2017 AM402_RS05755 7ca9541a5cba241df53d2fe00a70a1b9 192 Pfam PF02342 TerD domain 1 187 9.2E-86 T 06-07-2017 IPR003325 TerD domain GO:0006950 AM402_RS11185 68f587d885c07250ff1a443c2fb588ca 363 SUPERFAMILY SSF144064 19 360 4.61E-123 T 06-07-2017 AM402_RS11185 68f587d885c07250ff1a443c2fb588ca 363 Gene3D G3DSA:3.40.1570.10 185 361 1.4E-8 T 06-07-2017 AM402_RS11185 68f587d885c07250ff1a443c2fb588ca 363 Gene3D G3DSA:3.40.1570.10 24 155 1.0E-4 T 06-07-2017 AM402_RS11185 68f587d885c07250ff1a443c2fb588ca 363 Pfam PF05171 Haemin-degrading HemS.ChuX domain 43 171 8.5E-42 T 06-07-2017 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM402_RS11185 68f587d885c07250ff1a443c2fb588ca 363 Pfam PF05171 Haemin-degrading HemS.ChuX domain 221 358 2.2E-37 T 06-07-2017 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM402_RS20310 c2f660830a323ff4c5c845f4ff16a98c 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 7.4E-21 T 06-07-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM402_RS20310 c2f660830a323ff4c5c845f4ff16a98c 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 24.059 T 06-07-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM402_RS20310 c2f660830a323ff4c5c845f4ff16a98c 88 Pfam PF02416 mttA/Hcf106 family 4 54 6.4E-13 T 06-07-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM402_RS09120 06df1bea44ef2966bdd2242e0a6e8b43 224 SUPERFAMILY SSF56770 43 189 3.01E-64 T 06-07-2017 AM402_RS09120 06df1bea44ef2966bdd2242e0a6e8b43 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 06-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09120 06df1bea44ef2966bdd2242e0a6e8b43 224 Gene3D G3DSA:3.40.50.700 51 178 2.2E-31 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09120 06df1bea44ef2966bdd2242e0a6e8b43 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 3.8E-22 T 06-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09120 06df1bea44ef2966bdd2242e0a6e8b43 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 182 1.1E-69 T 06-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09120 06df1bea44ef2966bdd2242e0a6e8b43 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 42.008 T 06-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS20475 996016e069a9852eb06b6ac7f6e11858 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 6.0E-24 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS20475 996016e069a9852eb06b6ac7f6e11858 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 5.0E-11 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS20475 996016e069a9852eb06b6ac7f6e11858 402 Pfam PF12323 Helix-turn-helix domain 1 48 8.3E-16 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS20475 996016e069a9852eb06b6ac7f6e11858 402 Pfam PF01385 Probable transposase 163 275 7.2E-29 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 SUPERFAMILY SSF63380 4 97 1.04E-18 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 Gene3D G3DSA:2.40.30.10 4 97 4.0E-25 T 06-07-2017 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 Gene3D G3DSA:3.40.50.80 100 231 2.4E-36 T 06-07-2017 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 SUPERFAMILY SSF52343 100 231 5.5E-34 T 06-07-2017 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 2.6E-21 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 2.8E-10 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 2.8E-10 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 2.8E-10 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AM402_RS20280 c34833c57dba6916e23a83cb9b01ca63 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 2.8E-10 T 06-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AM402_RS16260 da4fcfbf3b944b353a2bd202b246ba56 160 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 2.4E-27 T 06-07-2017 IPR009921 Domain of unknown function DUF1456 AM402_RS16260 da4fcfbf3b944b353a2bd202b246ba56 160 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 1.1E-25 T 06-07-2017 IPR009921 Domain of unknown function DUF1456 AM402_RS21910 e66dacad5bd95aa0ee351d4b90dbc0be 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 2.0E-27 T 06-07-2017 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM402_RS21910 e66dacad5bd95aa0ee351d4b90dbc0be 78 Pfam PF05052 MerE protein 1 75 1.7E-47 T 06-07-2017 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM402_RS01185 3c51a79564bb8bb34db2d565dc885cac 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 433 1.2E-142 T 06-07-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM402_RS01185 3c51a79564bb8bb34db2d565dc885cac 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 316 333 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM402_RS01185 3c51a79564bb8bb34db2d565dc885cac 500 Gene3D G3DSA:1.20.1250.20 23 230 7.1E-23 T 06-07-2017 AM402_RS01185 3c51a79564bb8bb34db2d565dc885cac 500 Gene3D G3DSA:1.20.1250.20 259 445 4.3E-27 T 06-07-2017 AM402_RS01185 3c51a79564bb8bb34db2d565dc885cac 500 SUPERFAMILY SSF103661 466 498 7.98E-11 T 06-07-2017 AM402_RS01185 3c51a79564bb8bb34db2d565dc885cac 500 Pfam PF00083 Sugar (and other) transporter 29 448 2.1E-64 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM402_RS01185 3c51a79564bb8bb34db2d565dc885cac 500 Pfam PF08946 Osmosensory transporter coiled coil 455 500 8.4E-23 T 06-07-2017 IPR015041 Osmosensory transporter coiled coil AM402_RS01185 3c51a79564bb8bb34db2d565dc885cac 500 SUPERFAMILY SSF103473 25 442 1.01E-69 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS02395 fa26c07faa6a870e6467afefdddf4f22 245 Pfam PF02754 Cysteine-rich domain 133 216 1.0E-13 T 06-07-2017 IPR004017 Cysteine-rich domain AM402_RS02395 fa26c07faa6a870e6467afefdddf4f22 245 Pfam PF02754 Cysteine-rich domain 3 85 3.2E-13 T 06-07-2017 IPR004017 Cysteine-rich domain AM402_RS07200 158c83b22f157c1a2dcac38e921b5ae6 274 Gene3D G3DSA:3.40.50.10490 120 271 6.5E-21 T 06-07-2017 AM402_RS07200 158c83b22f157c1a2dcac38e921b5ae6 274 Gene3D G3DSA:1.10.10.10 8 83 9.9E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07200 158c83b22f157c1a2dcac38e921b5ae6 274 Pfam PF01380 SIS domain 140 265 8.4E-16 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS07200 158c83b22f157c1a2dcac38e921b5ae6 274 SUPERFAMILY SSF53697 106 271 2.67E-22 T 06-07-2017 AM402_RS07200 158c83b22f157c1a2dcac38e921b5ae6 274 SUPERFAMILY SSF46689 9 84 7.35E-18 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS07200 158c83b22f157c1a2dcac38e921b5ae6 274 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 78 1.8E-12 T 06-07-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM402_RS02620 960a1946caf118023d52a5f32eb49aa6 227 SUPERFAMILY SSF49354 21 139 1.9E-6 T 06-07-2017 IPR008962 PapD-like AM402_RS18720 e920f3538c1c39f39ba5c40b7f4a5b14 325 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 317 1.3E-20 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM402_RS18720 e920f3538c1c39f39ba5c40b7f4a5b14 325 Gene3D G3DSA:3.40.50.300 2 201 3.3E-65 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18720 e920f3538c1c39f39ba5c40b7f4a5b14 325 Gene3D G3DSA:3.30.1220.10 217 317 6.1E-31 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM402_RS18720 e920f3538c1c39f39ba5c40b7f4a5b14 325 SMART SM00833 224 318 5.3E-12 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM402_RS18720 e920f3538c1c39f39ba5c40b7f4a5b14 325 SUPERFAMILY SSF52540 2 181 1.26E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18720 e920f3538c1c39f39ba5c40b7f4a5b14 325 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 181 5.8E-48 T 06-07-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM402_RS18720 e920f3538c1c39f39ba5c40b7f4a5b14 325 SUPERFAMILY SSF90002 224 317 1.31E-25 T 06-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM402_RS01460 69d6156a7d832e5dba8bddaf47be0ff9 269 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 269 1.3E-107 T 06-07-2017 IPR009228 Capsid scaffolding protein GpO GO:0019069 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 PIRSF PIRSF000723 1 300 2.5E-108 T 06-07-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 SUPERFAMILY SSF53633 1 298 1.57E-71 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 Gene3D G3DSA:3.40.1160.10 1 299 5.4E-93 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 1.1E-55 T 06-07-2017 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 1.1E-55 T 06-07-2017 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 PRINTS PR01469 Bacterial carbamate kinase signature 204 219 1.1E-55 T 06-07-2017 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 PRINTS PR01469 Bacterial carbamate kinase signature 72 90 1.1E-55 T 06-07-2017 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 1.1E-55 T 06-07-2017 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 1.1E-55 T 06-07-2017 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 PRINTS PR01469 Bacterial carbamate kinase signature 255 270 1.1E-55 T 06-07-2017 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 TIGRFAM TIGR00746 arcC: carbamate kinase 2 299 1.3E-114 T 06-07-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM402_RS06670 c29df13baf441bf2c1416b86b48d1726 301 Pfam PF00696 Amino acid kinase family 2 280 2.8E-28 T 06-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AM402_RS09390 660e09202624aed677b3599331eb2559 218 Pfam PF11041 Protein of unknown function (DUF2612) 13 194 4.2E-57 T 06-07-2017 IPR021283 Protein of unknown function DUF2612 AM402_RS01215 daf419d2b185e286a9470a79e7a4eefb 386 SUPERFAMILY SSF53383 7 382 2.29E-116 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS01215 daf419d2b185e286a9470a79e7a4eefb 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 9.3E-141 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS01215 daf419d2b185e286a9470a79e7a4eefb 386 Gene3D G3DSA:3.90.1150.10 250 383 4.0E-48 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS01215 daf419d2b185e286a9470a79e7a4eefb 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 1.5E-198 T 06-07-2017 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48 AM402_RS01215 daf419d2b185e286a9470a79e7a4eefb 386 PIRSF PIRSF001434 1 384 3.5E-132 T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS01215 daf419d2b185e286a9470a79e7a4eefb 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 06-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM402_RS01215 daf419d2b185e286a9470a79e7a4eefb 386 Gene3D G3DSA:3.40.640.10 5 246 4.4E-87 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS00555 aef037b5c82d312e9a2a7370148af7a5 236 Pfam PF04340 Protein of unknown function, DUF484 13 233 7.3E-65 T 06-07-2017 IPR007435 Protein of unknown function DUF484 AM402_RS04380 7b6aed79d0342ed6ed9607b3428b5718 95 Gene3D G3DSA:3.30.70.20 40 69 6.9E-6 T 06-07-2017 AM402_RS04380 7b6aed79d0342ed6ed9607b3428b5718 95 SUPERFAMILY SSF54862 40 93 2.65E-8 T 06-07-2017 AM402_RS04380 7b6aed79d0342ed6ed9607b3428b5718 95 PIRSF PIRSF036548 1 95 2.0E-37 T 06-07-2017 IPR012206 Ferredoxin-like, FixX GO:0005506 AM402_RS04380 7b6aed79d0342ed6ed9607b3428b5718 95 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 38 92 4.5E-5 T 06-07-2017 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 Reactome: R-HSA-611105 AM402_RS01945 dd2ff59a55c979d28c5b1c59ad445ee4 621 Pfam PF03945 delta endotoxin, N-terminal domain 37 233 5.0E-5 T 06-07-2017 IPR005639 Delta endotoxin, N-terminal GO:0009405 AM402_RS01945 dd2ff59a55c979d28c5b1c59ad445ee4 621 Gene3D G3DSA:1.20.190.10 26 247 4.5E-24 T 06-07-2017 IPR005639 Delta endotoxin, N-terminal GO:0009405 AM402_RS01945 dd2ff59a55c979d28c5b1c59ad445ee4 621 SUPERFAMILY SSF56849 31 248 1.23E-18 T 06-07-2017 IPR005639 Delta endotoxin, N-terminal GO:0009405 AM402_RS19895 bdee52828a318feecb400b61d0f6e468 111 Pfam PF06836 Protein of unknown function (DUF1240) 3 104 3.3E-22 T 06-07-2017 IPR010665 Protein of unknown function DUF1240 AM402_RS20070 bff4f9bf2e595c4a558522c444e7ea71 450 PIRSF PIRSF002808 5 450 2.0E-173 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM402_RS20070 bff4f9bf2e595c4a558522c444e7ea71 450 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 7.8E-258 T 06-07-2017 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AM402_RS20070 bff4f9bf2e595c4a558522c444e7ea71 450 Pfam PF07690 Major Facilitator Superfamily 34 400 8.5E-45 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS20070 bff4f9bf2e595c4a558522c444e7ea71 450 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 6.4E-164 T 06-07-2017 AM402_RS20070 bff4f9bf2e595c4a558522c444e7ea71 450 SUPERFAMILY SSF103473 12 443 4.97E-85 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS20070 bff4f9bf2e595c4a558522c444e7ea71 450 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 06-07-2017 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-3229133|Reactome: R-HSA-70153 AM402_RS20070 bff4f9bf2e595c4a558522c444e7ea71 450 Gene3D G3DSA:1.20.1250.20 243 446 1.1E-45 T 06-07-2017 AM402_RS20070 bff4f9bf2e595c4a558522c444e7ea71 450 Gene3D G3DSA:1.20.1250.20 21 224 1.2E-52 T 06-07-2017 AM402_RS08890 c584a023713cd25d58c87a68bf63a257 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 2.5E-44 T 06-07-2017 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 AM402_RS08890 c584a023713cd25d58c87a68bf63a257 161 SMART SM00855 2 115 3.9E-4 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AM402_RS08890 c584a023713cd25d58c87a68bf63a257 161 SUPERFAMILY SSF53254 2 141 1.83E-19 T 06-07-2017 IPR029033 Histidine phosphatase superfamily AM402_RS08890 c584a023713cd25d58c87a68bf63a257 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 79 2.8E-7 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AM402_RS08890 c584a023713cd25d58c87a68bf63a257 161 Gene3D G3DSA:3.40.50.1240 1 158 9.1E-38 T 06-07-2017 IPR029033 Histidine phosphatase superfamily AM402_RS10560 a6f4ba141ab81e1cb718cfae801e62f1 350 Pfam PF10127 Predicted nucleotidyltransferase 12 126 2.1E-19 T 06-07-2017 IPR018775 Nucleotidyltransferase, predicted AM402_RS10145 c916789695cc7152ede91bd7e776821b 401 SUPERFAMILY SSF50182 178 244 1.08E-8 T 06-07-2017 IPR010920 LSM domain AM402_RS10145 c916789695cc7152ede91bd7e776821b 401 Pfam PF00924 Mechanosensitive ion channel 135 384 5.0E-40 T 06-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM402_RS10145 c916789695cc7152ede91bd7e776821b 401 Gene3D G3DSA:2.30.30.60 198 244 1.7E-8 T 06-07-2017 AM402_RS19200 ff199b9c50baa4590137c15d8dfd8648 80 Pfam PF01206 Sulfurtransferase TusA 12 80 5.6E-19 T 06-07-2017 IPR001455 TusA-like domain AM402_RS19200 ff199b9c50baa4590137c15d8dfd8648 80 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 13 37 - T 06-07-2017 IPR001455 TusA-like domain AM402_RS19200 ff199b9c50baa4590137c15d8dfd8648 80 SUPERFAMILY SSF64307 6 80 4.71E-24 T 06-07-2017 IPR001455 TusA-like domain AM402_RS19200 ff199b9c50baa4590137c15d8dfd8648 80 Gene3D G3DSA:3.30.110.40 9 80 1.5E-32 T 06-07-2017 IPR001455 TusA-like domain AM402_RS17395 dc0fe13202deaa3392506a6b6a68c7ec 356 Pfam PF01464 Transglycosylase SLT domain 194 318 3.5E-34 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS17395 dc0fe13202deaa3392506a6b6a68c7ec 356 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 06-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM402_RS17395 dc0fe13202deaa3392506a6b6a68c7ec 356 SUPERFAMILY SSF53955 190 355 6.48E-38 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS17395 dc0fe13202deaa3392506a6b6a68c7ec 356 Pfam PF11873 Domain of unknown function (DUF3393) 3 190 3.8E-75 T 06-07-2017 IPR024570 Murein transglycosylase-C, N-terminal AM402_RS17395 dc0fe13202deaa3392506a6b6a68c7ec 356 Gene3D G3DSA:1.10.530.10 186 356 2.3E-43 T 06-07-2017 AM402_RS06845 4c4f38e15e0d71900a4c8b3ab551d351 422 SUPERFAMILY SSF103473 6 407 4.45E-47 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS06845 4c4f38e15e0d71900a4c8b3ab551d351 422 Pfam PF07690 Major Facilitator Superfamily 22 366 7.8E-24 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS06845 4c4f38e15e0d71900a4c8b3ab551d351 422 Gene3D G3DSA:1.20.1250.20 223 406 5.4E-20 T 06-07-2017 AM402_RS06845 4c4f38e15e0d71900a4c8b3ab551d351 422 Gene3D G3DSA:1.20.1250.20 12 201 1.3E-16 T 06-07-2017 AM402_RS07700 cd48339ba5b849e48027535d8c012fe9 200 Pfam PF13023 HD domain 23 183 8.3E-48 T 06-07-2017 IPR006674 HD domain AM402_RS07700 cd48339ba5b849e48027535d8c012fe9 200 Gene3D G3DSA:1.10.3210.10 13 187 4.3E-38 T 06-07-2017 IPR006674 HD domain AM402_RS07700 cd48339ba5b849e48027535d8c012fe9 200 SUPERFAMILY SSF109604 9 194 1.49E-42 T 06-07-2017 AM402_RS01195 342b59d84c767f3c8ee85d6889336ddc 327 SUPERFAMILY SSF53448 4 229 1.63E-51 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS01195 342b59d84c767f3c8ee85d6889336ddc 327 Gene3D G3DSA:3.90.550.10 3 204 1.5E-51 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS01195 342b59d84c767f3c8ee85d6889336ddc 327 Pfam PF00535 Glycosyl transferase family 2 7 141 9.5E-35 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM402_RS10900 d3902fa751ea61883d029603ae9e23e3 237 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS10900 d3902fa751ea61883d029603ae9e23e3 237 SMART SM00382 31 219 3.3E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS10900 d3902fa751ea61883d029603ae9e23e3 237 SUPERFAMILY SSF52540 2 226 2.82E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10900 d3902fa751ea61883d029603ae9e23e3 237 Gene3D G3DSA:3.40.50.300 2 229 3.9E-71 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10900 d3902fa751ea61883d029603ae9e23e3 237 Pfam PF00005 ABC transporter 23 170 5.7E-36 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS02130 51b91ab6e12687c048e34d32bd42f6bf 506 Gene3D G3DSA:1.20.1250.20 16 196 1.2E-11 T 06-07-2017 AM402_RS02130 51b91ab6e12687c048e34d32bd42f6bf 506 SUPERFAMILY SSF103473 11 208 1.31E-29 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS02130 51b91ab6e12687c048e34d32bd42f6bf 506 SUPERFAMILY SSF103473 257 423 1.31E-29 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS02130 51b91ab6e12687c048e34d32bd42f6bf 506 SUPERFAMILY SSF103473 469 494 1.31E-29 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS02130 51b91ab6e12687c048e34d32bd42f6bf 506 Pfam PF07690 Major Facilitator Superfamily 20 417 4.3E-14 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS02130 51b91ab6e12687c048e34d32bd42f6bf 506 Gene3D G3DSA:1.20.1250.20 267 424 5.1E-10 T 06-07-2017 AM402_RS02130 51b91ab6e12687c048e34d32bd42f6bf 506 Gene3D G3DSA:1.20.1250.20 470 497 5.1E-10 T 06-07-2017 AM402_RS21075 2168e028cfb8246f8bd76a7f794ae900 90 Gene3D G3DSA:1.10.10.10 5 55 1.9E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS21075 2168e028cfb8246f8bd76a7f794ae900 90 Pfam PF09904 Winged helix-turn helix 5 81 1.7E-10 T 06-07-2017 IPR017162 Uncharacterised conserved protein UCP037266 AM402_RS13220 2d9acc4e26f283f43b88e941d6ed9583 234 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 127 163 1.7E-5 T 06-07-2017 IPR006530 YD repeat AM402_RS13220 2d9acc4e26f283f43b88e941d6ed9583 234 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 83 123 2.2E-6 T 06-07-2017 IPR006530 YD repeat AM402_RS13220 2d9acc4e26f283f43b88e941d6ed9583 234 Pfam PF05593 RHS Repeat 104 134 3.3E-6 T 06-07-2017 IPR031325 RHS repeat AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 52.431 T 06-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 SUPERFAMILY SSF53335 15 294 8.97E-51 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 300 4.7E-96 T 06-07-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 Pfam PF05175 Methyltransferase small domain 134 214 2.3E-16 T 06-07-2017 IPR007848 Methyltransferase small domain GO:0008168 AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 Gene3D G3DSA:1.10.8.10 15 106 7.7E-5 T 06-07-2017 AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 3.2E-134 T 06-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 PIRSF PIRSF037167 2 307 5.8E-146 T 06-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM402_RS08905 baf7d3739c3d51a4567f93612331f8ca 310 Gene3D G3DSA:3.40.50.150 108 289 9.1E-54 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04690 8d4dcf59de9de240e20a271572691cb0 245 Gene3D G3DSA:3.40.50.150 5 237 2.2E-12 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04690 8d4dcf59de9de240e20a271572691cb0 245 SUPERFAMILY SSF53335 6 232 3.49E-17 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS06605 cc7ea5fdf8105a4defd8a08c4686675c 835 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 301 311 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site AM402_RS06605 cc7ea5fdf8105a4defd8a08c4686675c 835 Pfam PF13954 PapC N-terminal domain 31 172 1.4E-42 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS06605 cc7ea5fdf8105a4defd8a08c4686675c 835 Pfam PF13953 PapC C-terminal domain 757 819 2.7E-18 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS06605 cc7ea5fdf8105a4defd8a08c4686675c 835 SUPERFAMILY SSF141729 29 149 3.01E-28 T 06-07-2017 AM402_RS06605 cc7ea5fdf8105a4defd8a08c4686675c 835 Pfam PF00577 Outer membrane usher protein 189 748 2.1E-187 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS08350 52074bed37d3dc87ad748679b922389c 299 Gene3D G3DSA:3.40.50.10330 10 157 1.8E-39 T 06-07-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AM402_RS08350 52074bed37d3dc87ad748679b922389c 299 Hamap MF_00361 NAD kinase [nadK]. 13 294 33.737 T 06-07-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AM402_RS08350 52074bed37d3dc87ad748679b922389c 299 SUPERFAMILY SSF111331 14 296 1.7E-93 T 06-07-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM402_RS08350 52074bed37d3dc87ad748679b922389c 299 Gene3D G3DSA:2.60.200.30 158 268 3.8E-42 T 06-07-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AM402_RS08350 52074bed37d3dc87ad748679b922389c 299 Pfam PF01513 ATP-NAD kinase 15 278 7.0E-76 T 06-07-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AM402_RS11520 73adb829d722a5ad849af62b640ec351 198 SUPERFAMILY SSF54060 33 128 3.53E-5 T 06-07-2017 AM402_RS11520 73adb829d722a5ad849af62b640ec351 198 Pfam PF01844 HNH endonuclease 84 126 4.8E-5 T 06-07-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.0E-6 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.0E-6 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.0E-6 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 3.6E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.6E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.6E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.6E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.6E-22 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 Gene3D G3DSA:3.40.50.720 2 253 4.3E-63 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 Pfam PF00106 short chain dehydrogenase 3 191 8.9E-44 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 SUPERFAMILY SSF51735 2 232 1.36E-57 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06820 3da539d22b61e4c6e2f276ddfa4ded9d 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 06-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM402_RS07075 673abf023fdc56f501194c4f61747657 323 Gene3D G3DSA:3.40.1190.20 6 303 8.5E-68 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS07075 673abf023fdc56f501194c4f61747657 323 Pfam PF00294 pfkB family carbohydrate kinase 6 303 2.1E-57 T 06-07-2017 IPR011611 Carbohydrate kinase PfkB AM402_RS07075 673abf023fdc56f501194c4f61747657 323 SUPERFAMILY SSF53613 5 308 1.26E-67 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS07075 673abf023fdc56f501194c4f61747657 323 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 06-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM402_RS06485 0346dafc5051338657ab1ed9e1a9d131 248 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 239 1.1E-69 T 06-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM402_RS06485 0346dafc5051338657ab1ed9e1a9d131 248 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 238 3.0E-67 T 06-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM402_RS06485 0346dafc5051338657ab1ed9e1a9d131 248 Gene3D G3DSA:3.90.550.10 6 242 2.6E-72 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS06485 0346dafc5051338657ab1ed9e1a9d131 248 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 9 241 30.241 T 06-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM402_RS06485 0346dafc5051338657ab1ed9e1a9d131 248 SUPERFAMILY SSF53448 10 239 3.6E-57 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS18370 b34884b99cbbab92dd81d573c1038f95 159 SUPERFAMILY SSF53098 3 142 3.04E-56 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS18370 b34884b99cbbab92dd81d573c1038f95 159 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 35.868 T 06-07-2017 IPR022892 Ribonuclease H GO:0004523 AM402_RS18370 b34884b99cbbab92dd81d573c1038f95 159 Pfam PF00075 RNase H 3 141 2.4E-51 T 06-07-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AM402_RS18370 b34884b99cbbab92dd81d573c1038f95 159 Gene3D G3DSA:3.30.420.10 2 149 1.1E-59 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS03940 e719929b1159fbbf0fe0af7aaa9564ad 445 PRINTS PR00723 Subtilisin serine protease family (S8) signature 375 391 5.7E-10 T 06-07-2017 IPR015500 Peptidase S8, subtilisin-related AM402_RS03940 e719929b1159fbbf0fe0af7aaa9564ad 445 PRINTS PR00723 Subtilisin serine protease family (S8) signature 165 184 5.7E-10 T 06-07-2017 IPR015500 Peptidase S8, subtilisin-related AM402_RS03940 e719929b1159fbbf0fe0af7aaa9564ad 445 PRINTS PR00723 Subtilisin serine protease family (S8) signature 200 213 5.7E-10 T 06-07-2017 IPR015500 Peptidase S8, subtilisin-related AM402_RS03940 e719929b1159fbbf0fe0af7aaa9564ad 445 Pfam PF00082 Subtilase family 198 418 8.0E-20 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS03940 e719929b1159fbbf0fe0af7aaa9564ad 445 SUPERFAMILY SSF52743 107 423 1.83E-39 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS03940 e719929b1159fbbf0fe0af7aaa9564ad 445 Gene3D G3DSA:3.40.50.200 102 419 1.6E-44 T 06-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM402_RS19980 593e82cb48d3b24c79ae34985cf18e1d 221 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.8E-94 T 06-07-2017 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AM402_RS19980 593e82cb48d3b24c79ae34985cf18e1d 221 Gene3D G3DSA:3.40.50.300 1 216 1.4E-70 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19980 593e82cb48d3b24c79ae34985cf18e1d 221 Pfam PF00005 ABC transporter 18 165 4.1E-37 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS19980 593e82cb48d3b24c79ae34985cf18e1d 221 SUPERFAMILY SSF52540 1 217 1.69E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19980 593e82cb48d3b24c79ae34985cf18e1d 221 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS19980 593e82cb48d3b24c79ae34985cf18e1d 221 SMART SM00382 27 214 9.2E-13 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS09670 54fd85e04e17b83d0c2188a68f2508ca 245 SUPERFAMILY SSF51126 29 232 1.05E-27 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS09670 54fd85e04e17b83d0c2188a68f2508ca 245 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 42 116 5.9E-19 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS09670 54fd85e04e17b83d0c2188a68f2508ca 245 Pfam PF05860 haemagglutination activity domain 26 119 5.2E-24 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS09670 54fd85e04e17b83d0c2188a68f2508ca 245 SMART SM00912 28 124 0.003 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS09670 54fd85e04e17b83d0c2188a68f2508ca 245 Gene3D G3DSA:2.160.20.10 25 190 1.7E-40 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS14730 81427b9660b65a8065ff1280b65a89cf 340 Pfam PF03592 Terminase small subunit 101 306 9.0E-31 T 06-07-2017 IPR005335 Terminase small subunit GO:0006323 AM402_RS05200 1eab4e90d394f0df6df1cc5d6867b387 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 142 5.8E-41 T 06-07-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 AM402_RS05200 1eab4e90d394f0df6df1cc5d6867b387 148 SUPERFAMILY SSF55729 3 145 1.06E-29 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS05200 1eab4e90d394f0df6df1cc5d6867b387 148 Pfam PF00583 Acetyltransferase (GNAT) family 48 120 3.4E-15 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS05200 1eab4e90d394f0df6df1cc5d6867b387 148 Gene3D G3DSA:3.40.630.30 3 147 5.4E-32 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS09585 e08a0e38bb8c4d0bed6d1d8b33bd7619 64 Pfam PF10781 Dextransucrase DSRB 1 60 5.1E-37 T 06-07-2017 IPR019717 Dextransucrase DSRB AM402_RS19950 29598cc4f2f4f07052abe41fb4a805ea 158 Pfam PF01047 MarR family 43 100 1.6E-7 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS19950 29598cc4f2f4f07052abe41fb4a805ea 158 Gene3D G3DSA:1.10.10.10 30 156 3.0E-19 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19950 29598cc4f2f4f07052abe41fb4a805ea 158 SUPERFAMILY SSF46785 33 151 3.16E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19950 29598cc4f2f4f07052abe41fb4a805ea 158 SMART SM00347 35 135 1.6E-8 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS05340 3102ce53b65b305ce663713353170e94 93 Pfam PF07178 TraL protein 5 91 7.5E-29 T 06-07-2017 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM402_RS05340 3102ce53b65b305ce663713353170e94 93 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 91 1.2E-14 T 06-07-2017 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM402_RS15680 d5cdf19c56caa4da6e6562137aa22f45 196 PIRSF PIRSF000495 1 196 1.5E-61 T 06-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM402_RS15680 d5cdf19c56caa4da6e6562137aa22f45 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.71 T 06-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM402_RS15680 d5cdf19c56caa4da6e6562137aa22f45 196 SUPERFAMILY SSF52317 3 195 2.14E-50 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS15680 d5cdf19c56caa4da6e6562137aa22f45 196 Pfam PF00117 Glutamine amidotransferase class-I 35 194 6.0E-17 T 06-07-2017 IPR017926 Glutamine amidotransferase AM402_RS15680 d5cdf19c56caa4da6e6562137aa22f45 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 2.2E-66 T 06-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM402_RS15680 d5cdf19c56caa4da6e6562137aa22f45 196 Gene3D G3DSA:3.40.50.880 1 196 2.4E-65 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS17150 329b40bfb097eee889f0690fe300b922 168 Gene3D G3DSA:3.90.950.20 3 165 2.1E-57 T 06-07-2017 IPR008136 CinA, C-terminal AM402_RS17150 329b40bfb097eee889f0690fe300b922 168 Pfam PF02464 Competence-damaged protein 9 164 5.3E-56 T 06-07-2017 IPR008136 CinA, C-terminal AM402_RS17150 329b40bfb097eee889f0690fe300b922 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 163 7.3E-54 T 06-07-2017 IPR008136 CinA, C-terminal AM402_RS17150 329b40bfb097eee889f0690fe300b922 168 SUPERFAMILY SSF142433 5 165 2.62E-56 T 06-07-2017 IPR008136 CinA, C-terminal AM402_RS14425 a60eb87eaff9c3a792b838d14c8e9fe5 199 Pfam PF02545 Maf-like protein 4 184 9.4E-42 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 AM402_RS14425 a60eb87eaff9c3a792b838d14c8e9fe5 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 184 2.5E-52 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 AM402_RS14425 a60eb87eaff9c3a792b838d14c8e9fe5 199 Gene3D G3DSA:3.90.950.10 2 186 4.3E-51 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AM402_RS14425 a60eb87eaff9c3a792b838d14c8e9fe5 199 SUPERFAMILY SSF52972 2 185 1.63E-56 T 06-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AM402_RS14425 a60eb87eaff9c3a792b838d14c8e9fe5 199 PIRSF PIRSF006305 1 192 6.4E-39 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 AM402_RS14425 a60eb87eaff9c3a792b838d14c8e9fe5 199 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 27.539 T 06-07-2017 IPR003697 Maf-like protein GO:0005737 AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 Gene3D G3DSA:2.30.30.30 1 64 3.6E-25 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 06-07-2017 IPR013852 Translation elongation factor P/YeiP, conserved site AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 4.9E-75 T 06-07-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 SUPERFAMILY SSF50249 69 128 7.28E-17 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 Gene3D G3DSA:2.40.50.140 66 129 7.1E-24 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 61 4.4E-22 T 06-07-2017 IPR013185 Translation elongation factor, KOW-like AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 SUPERFAMILY SSF50104 2 63 1.65E-18 T 06-07-2017 IPR008991 Translation protein SH3-like domain AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 SUPERFAMILY SSF50249 130 187 1.2E-18 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 SMART SM01185 69 123 1.1E-24 T 06-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 PIRSF PIRSF005901 2 188 3.1E-65 T 06-07-2017 IPR020599 Translation elongation factor P/YeiP AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.2E-26 T 06-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 Gene3D G3DSA:2.40.50.140 130 187 3.6E-29 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.305 T 06-07-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 SMART SM00841 131 186 6.9E-33 T 06-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM402_RS05020 1d1f54ea0f43f223ef3b11cba9e618d1 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 2.1E-21 T 06-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM402_RS05460 6c60d9d387cd11fc252bd3a90cd72623 319 SMART SM00382 62 216 0.003 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS05460 6c60d9d387cd11fc252bd3a90cd72623 319 Gene3D G3DSA:3.40.50.300 38 237 1.9E-24 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05460 6c60d9d387cd11fc252bd3a90cd72623 319 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 219 311 5.5E-23 T 06-07-2017 IPR013615 CbbQ/NirQ/NorQ, C-terminal AM402_RS05460 6c60d9d387cd11fc252bd3a90cd72623 319 Pfam PF07728 AAA domain (dynein-related subfamily) 67 186 9.7E-20 T 06-07-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM402_RS05460 6c60d9d387cd11fc252bd3a90cd72623 319 SUPERFAMILY SSF52540 32 284 1.84E-30 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02705 cd6666b69fb51a96e9d794854d4e8aea 115 SMART SM00507 15 70 3.8E-6 T 06-07-2017 IPR003615 HNH nuclease AM402_RS02705 cd6666b69fb51a96e9d794854d4e8aea 115 Pfam PF01844 HNH endonuclease 27 75 5.1E-12 T 06-07-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 Gene3D G3DSA:2.40.50.140 132 189 4.6E-22 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 2.1E-98 T 06-07-2017 IPR011897 Translation elongation factor P-like, YeiP AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 SMART SM00841 133 188 3.7E-25 T 06-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 SMART SM01185 69 125 6.7E-15 T 06-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 SUPERFAMILY SSF50104 1 64 9.03E-11 T 06-07-2017 IPR008991 Translation protein SH3-like domain AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 SUPERFAMILY SSF50249 67 130 3.0E-11 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 06-07-2017 IPR013852 Translation elongation factor P/YeiP, conserved site AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 SUPERFAMILY SSF50249 132 189 5.82E-14 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 Gene3D G3DSA:2.30.30.30 1 64 1.2E-14 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 46.147 T 06-07-2017 IPR011897 Translation elongation factor P-like, YeiP AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.5E-18 T 06-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 5.1E-16 T 06-07-2017 IPR013185 Translation elongation factor, KOW-like AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 Gene3D G3DSA:2.40.50.140 67 131 3.2E-14 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 PIRSF PIRSF005901 1 190 4.1E-59 T 06-07-2017 IPR020599 Translation elongation factor P/YeiP AM402_RS14525 78e1986a571977b2db8e01cd274d277d 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 125 8.8E-14 T 06-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM402_RS18750 63d29202e9d351bc123509581603bcce 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 179 1.3E-71 T 06-07-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 AM402_RS18750 63d29202e9d351bc123509581603bcce 183 SUPERFAMILY SSF53271 14 180 1.8E-52 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS18750 63d29202e9d351bc123509581603bcce 183 Pfam PF00156 Phosphoribosyl transferase domain 32 155 9.4E-18 T 06-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM402_RS18750 63d29202e9d351bc123509581603bcce 183 Gene3D G3DSA:3.40.50.2020 7 180 5.0E-69 T 06-07-2017 IPR029057 Phosphoribosyltransferase-like AM402_RS18750 63d29202e9d351bc123509581603bcce 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 37.897 T 06-07-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 AM402_RS05510 dbebd067261edc69945d76741ccda2d6 475 Pfam PF10117 McrBC 5-methylcytosine restriction system component 108 407 4.1E-24 T 06-07-2017 IPR019292 5-methylcytosine restriction system component AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 231 243 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 183 198 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 75 95 5.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 56 75 5.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 95 114 5.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 204 225 5.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 253 5.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 183 203 5.7E-67 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 58 254 2.0E-92 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 140 6.2E-30 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 176 188 6.2E-30 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 126 6.2E-30 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 54 63 6.2E-30 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 154 166 6.2E-30 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 244 254 6.2E-30 T 06-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM402_RS09760 b6d7866a7d7883acc3f414c1dac0e7a1 256 Pfam PF00813 FliP family 59 250 5.2E-80 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS14480 a338ae6f37cd9fbd537c8eed63cc7edf 459 Pfam PF13520 Amino acid permease 47 417 6.6E-32 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS14480 a338ae6f37cd9fbd537c8eed63cc7edf 459 PIRSF PIRSF006060 9 457 1.5E-69 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS19455 a88ca6b45f3b2513ac9d4c5e946f7c03 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 1.8E-24 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS19455 a88ca6b45f3b2513ac9d4c5e946f7c03 402 Pfam PF12323 Helix-turn-helix domain 1 48 8.3E-16 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS19455 a88ca6b45f3b2513ac9d4c5e946f7c03 402 Pfam PF01385 Probable transposase 163 275 6.2E-30 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS19455 a88ca6b45f3b2513ac9d4c5e946f7c03 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 2.9E-11 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS00980 6b514f9ec1f6931775c870052e6b538d 110 Gene3D G3DSA:3.90.470.10 1 109 7.1E-43 T 06-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM402_RS00980 6b514f9ec1f6931775c870052e6b538d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 06-07-2017 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00980 6b514f9ec1f6931775c870052e6b538d 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 5.5E-34 T 06-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM402_RS00980 6b514f9ec1f6931775c870052e6b538d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.9 T 06-07-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00980 6b514f9ec1f6931775c870052e6b538d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.2E-50 T 06-07-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00980 6b514f9ec1f6931775c870052e6b538d 110 SUPERFAMILY SSF54843 1 109 1.96E-42 T 06-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM402_RS20815 13454336ee350864cad29b58392a2e48 336 SUPERFAMILY SSF52980 1 191 2.47E-41 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM402_RS20815 13454336ee350864cad29b58392a2e48 336 Gene3D G3DSA:3.90.320.10 1 192 1.6E-37 T 06-07-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AM402_RS20815 13454336ee350864cad29b58392a2e48 336 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 6 159 2.5E-39 T 06-07-2017 IPR017482 Putative phage-type endonuclease AM402_RS20815 13454336ee350864cad29b58392a2e48 336 Pfam PF09588 YqaJ-like viral recombinase domain 12 148 3.3E-27 T 06-07-2017 IPR019080 YqaJ viral recombinase AM402_RS10610 2968b63f558bfd53762f8e24835e7e59 184 SUPERFAMILY SSF54001 25 183 1.7E-27 T 06-07-2017 AM402_RS10610 2968b63f558bfd53762f8e24835e7e59 184 Gene3D G3DSA:2.30.30.330 25 183 2.9E-27 T 06-07-2017 AM402_RS10610 2968b63f558bfd53762f8e24835e7e59 184 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 25 179 1.1E-19 T 06-07-2017 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM402_RS05565 145d88b67e368c1cb1a7e14f18c341ee 215 Gene3D G3DSA:1.10.260.40 3 67 2.2E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS05565 145d88b67e368c1cb1a7e14f18c341ee 215 SUPERFAMILY SSF51306 84 212 1.74E-28 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS05565 145d88b67e368c1cb1a7e14f18c341ee 215 Pfam PF00717 Peptidase S24-like 126 200 1.2E-15 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS05565 145d88b67e368c1cb1a7e14f18c341ee 215 Pfam PF01381 Helix-turn-helix 16 61 2.1E-7 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS05565 145d88b67e368c1cb1a7e14f18c341ee 215 Gene3D G3DSA:2.10.109.10 119 214 2.5E-33 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS05565 145d88b67e368c1cb1a7e14f18c341ee 215 SMART SM00530 7 61 1.6E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS05565 145d88b67e368c1cb1a7e14f18c341ee 215 SUPERFAMILY SSF47413 4 64 8.16E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS17025 f1a4edfcefc9317771c7c3d59b755dc9 243 Gene3D G3DSA:3.60.140.10 3 243 1.1E-90 T 06-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AM402_RS17025 f1a4edfcefc9317771c7c3d59b755dc9 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 243 3.2E-63 T 06-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AM402_RS17025 f1a4edfcefc9317771c7c3d59b755dc9 243 SUPERFAMILY SSF64438 3 243 4.21E-84 T 06-07-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM402_RS17025 f1a4edfcefc9317771c7c3d59b755dc9 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 5.4E-72 T 06-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AM402_RS08075 dd98077e47663e7e0085ff79b365f04e 71 Pfam PF04325 Protein of unknown function (DUF465) 19 66 9.7E-16 T 06-07-2017 IPR007420 Protein of unknown function DUF465 AM402_RS16985 423cf7a6134fd566bb94e2f28bf0ad57 452 Gene3D G3DSA:3.30.870.10 255 395 3.2E-12 T 06-07-2017 AM402_RS16985 423cf7a6134fd566bb94e2f28bf0ad57 452 Gene3D G3DSA:3.30.870.10 26 189 4.4E-14 T 06-07-2017 AM402_RS16985 423cf7a6134fd566bb94e2f28bf0ad57 452 PIRSF PIRSF000850 1 452 2.0E-226 T 06-07-2017 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|Reactome: R-HSA-1483148 AM402_RS16985 423cf7a6134fd566bb94e2f28bf0ad57 452 Pfam PF13091 PLD-like domain 258 403 3.6E-21 T 06-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AM402_RS16985 423cf7a6134fd566bb94e2f28bf0ad57 452 SUPERFAMILY SSF56024 256 394 9.16E-17 T 06-07-2017 AM402_RS16985 423cf7a6134fd566bb94e2f28bf0ad57 452 SUPERFAMILY SSF56024 8 190 3.45E-24 T 06-07-2017 AM402_RS16985 423cf7a6134fd566bb94e2f28bf0ad57 452 SMART SM00155 353 380 1.6E-4 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM402_RS16985 423cf7a6134fd566bb94e2f28bf0ad57 452 SMART SM00155 133 159 0.02 T 06-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM402_RS12295 0922d95ff00f503942ac8e91f58d42d4 175 Gene3D G3DSA:1.20.120.330 7 118 2.2E-27 T 06-07-2017 AM402_RS12295 0922d95ff00f503942ac8e91f58d42d4 175 SUPERFAMILY SSF158668 8 139 9.29E-33 T 06-07-2017 AM402_RS12295 0922d95ff00f503942ac8e91f58d42d4 175 Pfam PF05068 Mannitol repressor 23 119 1.3E-5 T 06-07-2017 IPR007761 Mannitol repressor AM402_RS17035 eaf555af6de813ab77525781d13ab394 244 Gene3D G3DSA:1.25.40.10 33 233 2.4E-7 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS17035 eaf555af6de813ab77525781d13ab394 244 SUPERFAMILY SSF48452 35 122 8.78E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS17035 eaf555af6de813ab77525781d13ab394 244 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 38.857 T 06-07-2017 IPR017689 Outer membrane protein assembly factor BamD AM402_RS17035 eaf555af6de813ab77525781d13ab394 244 Pfam PF13525 Outer membrane lipoprotein 30 237 1.1E-80 T 06-07-2017 AM402_RS17035 eaf555af6de813ab77525781d13ab394 244 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 242 3.1E-86 T 06-07-2017 IPR017689 Outer membrane protein assembly factor BamD AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 1.0E-114 T 06-07-2017 IPR028053 Membrane insertase YidC, N-terminal AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 68 89 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 249 264 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 324 344 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 415 438 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 462 484 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 157 177 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 499 522 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR00701 60kDa inner membrane protein signature 216 234 4.8E-103 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 1.5E-69 T 06-07-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 26.454 T 06-07-2017 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 2.3E-29 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 2.3E-29 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 2.3E-29 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 Pfam PF02096 60Kd inner membrane protein 354 533 1.1E-60 T 06-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM402_RS01915 e1cf276216f5f8153cee8b872bfa64ed 546 Pfam PF14849 YidC periplasmic domain 63 343 3.6E-90 T 06-07-2017 IPR028053 Membrane insertase YidC, N-terminal AM402_RS07415 e0b0e8b42df6229a86c2b53096704c85 598 Gene3D G3DSA:3.90.1310.10 151 250 4.5E-30 T 06-07-2017 AM402_RS07415 e0b0e8b42df6229a86c2b53096704c85 598 SUPERFAMILY SSF56601 244 578 5.33E-86 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS07415 e0b0e8b42df6229a86c2b53096704c85 598 Pfam PF03717 Penicillin-binding Protein dimerisation domain 77 230 3.1E-18 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM402_RS07415 e0b0e8b42df6229a86c2b53096704c85 598 Gene3D G3DSA:3.40.710.10 251 570 1.7E-84 T 06-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AM402_RS07415 e0b0e8b42df6229a86c2b53096704c85 598 SUPERFAMILY SSF56519 72 243 2.22E-42 T 06-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM402_RS07415 e0b0e8b42df6229a86c2b53096704c85 598 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 564 4.0E-80 T 06-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM402_RS15090 ed678767d3ae44e271a3597ab0f2962b 183 PIRSF PIRSF010252 1 177 6.6E-56 T 06-07-2017 IPR009809 Cell division protein ZapC AM402_RS15090 ed678767d3ae44e271a3597ab0f2962b 183 Pfam PF07126 Cell-division protein ZapC 2 170 4.2E-68 T 06-07-2017 IPR009809 Cell division protein ZapC AM402_RS15090 ed678767d3ae44e271a3597ab0f2962b 183 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 39.759 T 06-07-2017 IPR009809 Cell division protein ZapC AM402_RS08685 5ca5f16b40009df3ec77f53aa05b6d51 298 Pfam PF04261 Dyp-type peroxidase family 24 293 6.9E-84 T 06-07-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM402_RS08685 5ca5f16b40009df3ec77f53aa05b6d51 298 SUPERFAMILY SSF54909 1 296 5.01E-85 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS08685 5ca5f16b40009df3ec77f53aa05b6d51 298 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 1.7E-77 T 06-07-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 Gene3D G3DSA:3.40.50.720 1 163 1.7E-64 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18270 784e795bebb48a1870ffb904933be080 339 SUPERFAMILY SSF55347 155 317 2.29E-56 T 06-07-2017 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 6.7E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 6.7E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 6.7E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 6.7E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 6.7E-30 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 PIRSF PIRSF000149 1 337 5.5E-131 T 06-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 5.0E-52 T 06-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.025 T 06-07-2017 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 06-07-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 1.2E-179 T 06-07-2017 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 SUPERFAMILY SSF51735 1 180 4.49E-55 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18270 784e795bebb48a1870ffb904933be080 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 1.0E-53 T 06-07-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 SMART SM00846 3 155 6.0E-80 T 06-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM402_RS18270 784e795bebb48a1870ffb904933be080 339 Gene3D G3DSA:3.30.360.10 164 318 1.2E-60 T 06-07-2017 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 Gene3D G3DSA:1.20.1250.20 8 189 1.9E-30 T 06-07-2017 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 Gene3D G3DSA:1.20.1250.20 464 490 2.8E-19 T 06-07-2017 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 Gene3D G3DSA:1.20.1250.20 249 428 2.8E-19 T 06-07-2017 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 PRINTS PR01036 Tetracycline resistance protein TetB signature 333 353 2.4E-11 T 06-07-2017 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 2.4E-11 T 06-07-2017 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 2.4E-11 T 06-07-2017 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 2.4E-11 T 06-07-2017 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 Pfam PF07690 Major Facilitator Superfamily 13 405 2.0E-56 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 8 485 2.6E-83 T 06-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 SUPERFAMILY SSF103473 463 492 4.32E-69 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 SUPERFAMILY SSF103473 5 196 4.32E-69 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS12450 38657df27eb5ce128c63c05705e70eeb 500 SUPERFAMILY SSF103473 244 415 4.32E-69 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS02660 c878c2be4bb2596103bdc5be3563f447 89 Pfam PF05488 PAAR motif 12 81 4.5E-19 T 06-07-2017 IPR008727 PAAR motif AM402_RS10340 bbf1ab152caae7046e0a454613d78d07 202 Gene3D G3DSA:1.10.260.40 96 158 2.3E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS12360 3ebf36fc5c09d6c24e4ec56dbb4d851f 87 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 87 1.0E-9 T 06-07-2017 IPR020317 Uncharacterised protein family YjbD AM402_RS12360 3ebf36fc5c09d6c24e4ec56dbb4d851f 87 Pfam PF11656 YjbD family (DUF3811) 1 87 8.8E-36 T 06-07-2017 IPR020317 Uncharacterised protein family YjbD AM402_RS10010 1a8ef199853d8627de0a3680494e4a1c 460 Pfam PF00324 Amino acid permease 18 446 3.0E-115 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM402_RS10010 1a8ef199853d8627de0a3680494e4a1c 460 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM402_RS10010 1a8ef199853d8627de0a3680494e4a1c 460 PIRSF PIRSF006060 1 459 5.2E-79 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS11835 251bfef3e2655a42024c557d8f9a534a 222 Pfam PF04012 PspA/IM30 family 2 215 2.9E-49 T 06-07-2017 IPR007157 PspA/IM30 AM402_RS11835 251bfef3e2655a42024c557d8f9a534a 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 1.7E-93 T 06-07-2017 IPR014319 Phage shock protein, PspA AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.3E-6 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 Gene3D G3DSA:3.40.190.10 96 184 2.9E-16 T 06-07-2017 AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 Pfam PF03466 LysR substrate binding domain 94 295 1.7E-38 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 SUPERFAMILY SSF53850 96 299 2.48E-39 T 06-07-2017 AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 Gene3D G3DSA:3.40.190.10 185 263 3.3E-20 T 06-07-2017 AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.9E-17 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 Gene3D G3DSA:1.10.10.10 6 90 2.8E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS17285 e58fd5437f5e6095151324e03abe3eaa 308 SUPERFAMILY SSF46785 4 85 2.01E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.0E-35 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.0E-35 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.0E-35 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-35 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.0E-35 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.0E-35 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 6.1E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 6.1E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.1E-8 T 06-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AM402_RS01315 8130af11900bbdf150360162e3f16872 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 240 5.3E-64 T 06-07-2017 AM402_RS01315 8130af11900bbdf150360162e3f16872 251 Gene3D G3DSA:3.40.50.720 1 243 6.9E-78 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01315 8130af11900bbdf150360162e3f16872 251 SUPERFAMILY SSF51735 6 242 2.9E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS01470 296740b5691c4c84d698ad71a9c55d52 342 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 50 332 2.0E-83 T 06-07-2017 IPR006430 Phage portal protein PBSX family AM402_RS01470 296740b5691c4c84d698ad71a9c55d52 342 Pfam PF04860 Phage portal protein 86 335 4.5E-15 T 06-07-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein AM402_RS01470 296740b5691c4c84d698ad71a9c55d52 342 PIRSF PIRSF018494 1 342 6.1E-153 T 06-07-2017 IPR030935 Phage portal protein PBSX family, Proteobacteria AM402_RS20400 574a9c61a32ae7d50f42f72e512a957a 298 SUPERFAMILY SSF160240 217 288 8.89E-7 T 06-07-2017 AM402_RS20400 574a9c61a32ae7d50f42f72e512a957a 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 289 2.7E-84 T 06-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM402_RS20400 574a9c61a32ae7d50f42f72e512a957a 298 Pfam PF01545 Cation efflux family 18 209 7.5E-43 T 06-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM402_RS20400 574a9c61a32ae7d50f42f72e512a957a 298 SUPERFAMILY SSF161111 16 210 2.35E-53 T 06-07-2017 AM402_RS20400 574a9c61a32ae7d50f42f72e512a957a 298 Gene3D G3DSA:1.20.1510.10 16 209 8.6E-58 T 06-07-2017 IPR027469 Cation efflux protein transmembrane domain AM402_RS17605 00f0e167d641528c4d23cb9c0917905d 137 Pfam PF11190 Protein of unknown function (DUF2976) 49 135 5.2E-35 T 06-07-2017 IPR021356 Integrating conjugative element protein PFL4702 AM402_RS17605 00f0e167d641528c4d23cb9c0917905d 137 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 34 136 1.4E-37 T 06-07-2017 IPR021356 Integrating conjugative element protein PFL4702 AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 ProSitePatterns PS00380 Rhodanese signature 1. 41 52 - T 06-07-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 SMART SM00450 7 131 1.4E-18 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 SMART SM00450 156 276 4.5E-17 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 Pfam PF00581 Rhodanese-like domain 160 272 5.5E-14 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 Pfam PF00581 Rhodanese-like domain 8 128 3.1E-15 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 SUPERFAMILY SSF52821 3 145 1.11E-39 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 Gene3D G3DSA:3.40.250.10 153 277 1.9E-41 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 SUPERFAMILY SSF52821 159 274 3.4E-34 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS15860 b6058b9d8b5b0d368db9ec81c283edf7 281 Gene3D G3DSA:3.40.250.10 1 143 7.5E-42 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS08360 3939d9799489b7c73823479127f5351b 226 SMART SM00987 49 210 2.2E-40 T 06-07-2017 AM402_RS08360 3939d9799489b7c73823479127f5351b 226 SMART SM00986 49 210 2.2E-40 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM402_RS08360 3939d9799489b7c73823479127f5351b 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.8E-89 T 06-07-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM402_RS08360 3939d9799489b7c73823479127f5351b 226 Gene3D G3DSA:3.40.470.10 6 222 1.6E-103 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM402_RS08360 3939d9799489b7c73823479127f5351b 226 SUPERFAMILY SSF52141 4 222 4.14E-96 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM402_RS08360 3939d9799489b7c73823479127f5351b 226 Pfam PF03167 Uracil DNA glycosylase superfamily 52 209 9.3E-26 T 06-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM402_RS08360 3939d9799489b7c73823479127f5351b 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.978 T 06-07-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM402_RS00250 b1b5611e5cf382915eec550a6b659813 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.425 T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AM402_RS00250 b1b5611e5cf382915eec550a6b659813 175 SUPERFAMILY SSF50324 3 175 1.83E-67 T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AM402_RS00250 b1b5611e5cf382915eec550a6b659813 175 Gene3D G3DSA:3.90.80.10 4 174 4.6E-61 T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AM402_RS00250 b1b5611e5cf382915eec550a6b659813 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AM402_RS00250 b1b5611e5cf382915eec550a6b659813 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 4.6E-54 T 06-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AM402_RS13450 cf20b702888b06b1b0ca09e0a8c44f04 290 SUPERFAMILY SSF56112 7 271 1.7E-32 T 06-07-2017 IPR011009 Protein kinase-like domain AM402_RS13450 cf20b702888b06b1b0ca09e0a8c44f04 290 Gene3D G3DSA:3.90.1200.10 97 258 4.4E-10 T 06-07-2017 AM402_RS13450 cf20b702888b06b1b0ca09e0a8c44f04 290 Pfam PF03881 Fructosamine kinase 1 287 9.2E-106 T 06-07-2017 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AM402_RS13450 cf20b702888b06b1b0ca09e0a8c44f04 290 PIRSF PIRSF006221 1 290 1.1E-83 T 06-07-2017 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AM402_RS03735 4e5833a4fae0c2aa8c411ce7e0229879 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 06-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS03735 4e5833a4fae0c2aa8c411ce7e0229879 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 4.9E-136 T 06-07-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS03735 4e5833a4fae0c2aa8c411ce7e0229879 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.528 T 06-07-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS03735 4e5833a4fae0c2aa8c411ce7e0229879 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 7.0E-141 T 06-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS03735 4e5833a4fae0c2aa8c411ce7e0229879 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 06-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM402_RS03735 4e5833a4fae0c2aa8c411ce7e0229879 357 Gene3D G3DSA:3.20.20.210 2 353 7.1E-157 T 06-07-2017 AM402_RS03735 4e5833a4fae0c2aa8c411ce7e0229879 357 SUPERFAMILY SSF51726 2 353 1.38E-122 T 06-07-2017 AM402_RS07330 66281234d5852aefe7ea6bd06fc9cac2 306 PIRSF PIRSF036979 16 306 7.8E-98 T 06-07-2017 IPR006035 Ureohydrolase GO:0046872 AM402_RS07330 66281234d5852aefe7ea6bd06fc9cac2 306 Pfam PF00491 Arginase family 36 298 3.9E-87 T 06-07-2017 IPR006035 Ureohydrolase GO:0046872 AM402_RS07330 66281234d5852aefe7ea6bd06fc9cac2 306 Gene3D G3DSA:3.40.800.10 15 304 3.3E-97 T 06-07-2017 IPR023696 Ureohydrolase domain AM402_RS07330 66281234d5852aefe7ea6bd06fc9cac2 306 TIGRFAM TIGR01230 agmatinase: agmatinase 25 300 5.0E-102 T 06-07-2017 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AM402_RS07330 66281234d5852aefe7ea6bd06fc9cac2 306 ProSitePatterns PS01053 Arginase family signature. 230 251 - T 06-07-2017 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM402_RS07330 66281234d5852aefe7ea6bd06fc9cac2 306 Hamap MF_01418 Agmatinase [speB]. 3 306 65.683 T 06-07-2017 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 AM402_RS07330 66281234d5852aefe7ea6bd06fc9cac2 306 SUPERFAMILY SSF52768 15 303 2.52E-92 T 06-07-2017 AM402_RS16130 078463f16a67b96e39dab4b2e15b9af6 456 Gene3D G3DSA:1.20.1250.20 3 189 1.2E-28 T 06-07-2017 AM402_RS16130 078463f16a67b96e39dab4b2e15b9af6 456 Pfam PF07690 Major Facilitator Superfamily 12 401 6.9E-47 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS16130 078463f16a67b96e39dab4b2e15b9af6 456 SUPERFAMILY SSF103473 2 190 6.8E-61 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS16130 078463f16a67b96e39dab4b2e15b9af6 456 SUPERFAMILY SSF103473 240 447 6.8E-61 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS16130 078463f16a67b96e39dab4b2e15b9af6 456 Gene3D G3DSA:1.20.1250.20 255 450 2.3E-20 T 06-07-2017 AM402_RS10255 24e9e92d9d60ee4f7cef366c3ecbc213 289 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 56 252 9.8E-38 T 06-07-2017 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AM402_RS10255 24e9e92d9d60ee4f7cef366c3ecbc213 289 PIRSF PIRSF020419 1 289 1.8E-85 T 06-07-2017 IPR016773 Ferric uptake regulator, CjrA, predicted AM402_RS10255 24e9e92d9d60ee4f7cef366c3ecbc213 289 SUPERFAMILY SSF159501 36 285 1.31E-67 T 06-07-2017 AM402_RS05945 eadc269b545de1986ca166249e290281 279 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 265 38.659 T 06-07-2017 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AM402_RS05945 eadc269b545de1986ca166249e290281 279 SUPERFAMILY SSF56300 16 276 5.07E-58 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS05945 eadc269b545de1986ca166249e290281 279 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 4.3E-19 T 06-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AM402_RS05945 eadc269b545de1986ca166249e290281 279 Gene3D G3DSA:3.60.21.10 14 249 1.3E-38 T 06-07-2017 IPR029052 Metallo-dependent phosphatase-like AM402_RS05945 eadc269b545de1986ca166249e290281 279 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 265 2.0E-20 T 06-07-2017 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 SUPERFAMILY SSF142019 94 306 4.18E-58 T 06-07-2017 AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 Pfam PF10531 SLBB domain 299 347 4.0E-10 T 06-07-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 SUPERFAMILY SSF46548 339 447 1.06E-21 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 286 2.5E-49 T 06-07-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 449 7.8E-181 T 06-07-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 Pfam PF12838 4Fe-4S dicluster domain 379 433 6.9E-9 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 419 430 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 380 391 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 755 250.572 T 06-07-2017 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 114 4.8E-31 T 06-07-2017 IPR026902 RnfC Barrel sandwich hybrid domain AM402_RS12175 4e5e2f00d617fa75cf590d999931b075 877 Gene3D G3DSA:1.10.1060.10 335 450 1.5E-20 T 06-07-2017 AM402_RS12540 cf52a2a39a8d89f4013e6389307e78f3 252 Pfam PF00583 Acetyltransferase (GNAT) family 182 241 2.6E-10 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS12540 cf52a2a39a8d89f4013e6389307e78f3 252 Gene3D G3DSA:3.40.630.30 119 244 2.5E-22 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS12540 cf52a2a39a8d89f4013e6389307e78f3 252 SUPERFAMILY SSF55729 122 248 3.88E-22 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS04135 c398bd6884f96c80b99fa0ccd8d2fd99 84 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 12 82 1.9E-12 T 06-07-2017 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 AM402_RS04135 c398bd6884f96c80b99fa0ccd8d2fd99 84 SUPERFAMILY SSF140129 12 79 5.23E-16 T 06-07-2017 AM402_RS04135 c398bd6884f96c80b99fa0ccd8d2fd99 84 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 13 83 6.8E-24 T 06-07-2017 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 AM402_RS13440 3b73a4709055d08b0ca9e774ce01daf0 303 SUPERFAMILY SSF81345 5 261 2.35E-38 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS13440 3b73a4709055d08b0ca9e774ce01daf0 303 Pfam PF00950 ABC 3 transport family 11 265 1.0E-88 T 06-07-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM402_RS13440 3b73a4709055d08b0ca9e774ce01daf0 303 Gene3D G3DSA:1.10.3470.10 53 265 1.1E-8 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS17670 55d66d45c74ac496efbcbf8be33b474e 319 Pfam PF04754 Putative transposase, YhgA-like 10 211 4.3E-74 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like AM402_RS17670 55d66d45c74ac496efbcbf8be33b474e 319 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 316 1.9E-45 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 SUPERFAMILY SSF103491 16 424 1.7E-132 T 06-07-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.815 T 06-07-2017 IPR026593 Protein translocase subunit SecY AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 06-07-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.2E-98 T 06-07-2017 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 PIRSF PIRSF004557 11 440 5.6E-125 T 06-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 Gene3D G3DSA:1.10.3370.10 16 437 1.5E-166 T 06-07-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 Pfam PF00344 SecY translocase 76 417 3.0E-119 T 06-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 6.0E-140 T 06-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS00905 4a1542376ee7302f48d57d75c304969e 440 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 06-07-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM402_RS02925 e2c4603ce6c21b1ff1f79dcca809e51e 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS02925 e2c4603ce6c21b1ff1f79dcca809e51e 250 SMART SM00382 36 223 6.4E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS02925 e2c4603ce6c21b1ff1f79dcca809e51e 250 SUPERFAMILY SSF52540 2 234 7.41E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02925 e2c4603ce6c21b1ff1f79dcca809e51e 250 Gene3D G3DSA:3.40.50.300 2 248 1.4E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02925 e2c4603ce6c21b1ff1f79dcca809e51e 250 Pfam PF00005 ABC transporter 27 174 3.3E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS11910 c5f4342d06d443ebdca43e8c6435f94f 100 SUPERFAMILY SSF54909 1 89 6.6E-25 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS11910 c5f4342d06d443ebdca43e8c6435f94f 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 1.9E-12 T 06-07-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain AM402_RS11910 c5f4342d06d443ebdca43e8c6435f94f 100 Gene3D G3DSA:3.30.70.900 1 92 8.4E-26 T 06-07-2017 AM402_RS18415 0d19bea10678df4e1268eb36c4edea81 265 SUPERFAMILY SSF101386 9 108 1.64E-24 T 06-07-2017 AM402_RS18415 0d19bea10678df4e1268eb36c4edea81 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 229 9.9E-11 T 06-07-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM402_RS18415 0d19bea10678df4e1268eb36c4edea81 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 1.6E-27 T 06-07-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM402_RS18415 0d19bea10678df4e1268eb36c4edea81 265 Gene3D G3DSA:1.10.287.1080 22 76 2.4E-7 T 06-07-2017 AM402_RS18415 0d19bea10678df4e1268eb36c4edea81 265 Gene3D G3DSA:1.10.287.1080 135 223 3.2E-12 T 06-07-2017 AM402_RS18415 0d19bea10678df4e1268eb36c4edea81 265 SUPERFAMILY SSF101386 138 239 8.22E-26 T 06-07-2017 AM402_RS18415 0d19bea10678df4e1268eb36c4edea81 265 TIGRFAM TIGR00444 mazG: MazG family protein 13 260 1.9E-103 T 06-07-2017 IPR011551 NTP pyrophosphohydrolase MazG AM402_RS08995 f84a768e96c7c699048fa34d3bd9e105 163 Pfam PF02674 Colicin V production protein 4 143 4.8E-38 T 06-07-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 3 617 34.187 T 06-07-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 Gene3D G3DSA:2.40.170.20 155 617 1.8E-91 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 149 8.0E-28 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 SUPERFAMILY SSF56935 32 617 3.05E-119 T 06-07-2017 AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 Pfam PF00593 TonB dependent receptor 390 616 3.3E-34 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 600 617 - T 06-07-2017 IPR010917 TonB-dependent receptor, conserved site AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 8 617 8.9E-205 T 06-07-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 Gene3D G3DSA:2.170.130.10 29 154 2.9E-38 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS01105 31dda253b141fae378f6d12bc639065e 617 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 06-07-2017 IPR010916 TonB box, conserved site AM402_RS12225 410bf8f1eb7b4c36473ab1a294fd99e0 309 Gene3D G3DSA:3.30.54.10 174 235 2.1E-33 T 06-07-2017 AM402_RS12225 410bf8f1eb7b4c36473ab1a294fd99e0 309 Gene3D G3DSA:3.30.54.10 295 308 2.1E-33 T 06-07-2017 AM402_RS12225 410bf8f1eb7b4c36473ab1a294fd99e0 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 10 306 3.3E-128 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM402_RS12225 410bf8f1eb7b4c36473ab1a294fd99e0 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 11 308 8.3E-129 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM402_RS12225 410bf8f1eb7b4c36473ab1a294fd99e0 309 Gene3D G3DSA:3.50.14.10 7 173 2.0E-83 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM402_RS12225 410bf8f1eb7b4c36473ab1a294fd99e0 309 Gene3D G3DSA:3.50.14.10 236 281 2.0E-83 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM402_RS12225 410bf8f1eb7b4c36473ab1a294fd99e0 309 SUPERFAMILY SSF56596 6 307 3.79E-103 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM402_RS11735 178c3049c103ca11946b54701e0ddd7c 112 Pfam PF00462 Glutaredoxin 16 80 1.4E-17 T 06-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM402_RS11735 178c3049c103ca11946b54701e0ddd7c 112 SUPERFAMILY SSF52833 2 101 1.89E-34 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS11735 178c3049c103ca11946b54701e0ddd7c 112 PIRSF PIRSF005894 1 107 9.4E-52 T 06-07-2017 IPR014434 Monothiol glutaredoxin AM402_RS11735 178c3049c103ca11946b54701e0ddd7c 112 Gene3D G3DSA:3.40.30.10 7 101 4.1E-32 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS11735 178c3049c103ca11946b54701e0ddd7c 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 2.7E-46 T 06-07-2017 IPR004480 Monothiol glutaredoxin-related AM402_RS01660 2765388ef27071bdb31c15fb945ec998 145 Pfam PF00581 Rhodanese-like domain 43 134 6.1E-14 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS01660 2765388ef27071bdb31c15fb945ec998 145 SUPERFAMILY SSF52821 16 143 7.73E-29 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS01660 2765388ef27071bdb31c15fb945ec998 145 SMART SM00450 41 139 1.0E-15 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS01660 2765388ef27071bdb31c15fb945ec998 145 Gene3D G3DSA:3.40.250.10 23 144 1.8E-23 T 06-07-2017 IPR001763 Rhodanese-like domain AM402_RS20420 63ad033b6c9583b9f8e154e09c7b8cff 262 Pfam PF01925 Sulfite exporter TauE/SafE 7 257 3.4E-34 T 06-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 AM402_RS17430 8d0aaf362457fe6ea623094f93155852 324 PIRSF PIRSF037112 5 324 6.8E-106 T 06-07-2017 IPR017113 Antirestriction, ArdC AM402_RS17430 8d0aaf362457fe6ea623094f93155852 324 Pfam PF08401 Domain of unknown function (DUF1738) 18 145 1.3E-35 T 06-07-2017 IPR013610 Domain of unknown function DUF1738 AM402_RS13160 abb2a5b84bb91b9ef02cae9a5d1fffae 309 Gene3D G3DSA:3.80.30.20 23 256 2.4E-29 T 06-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AM402_RS13160 abb2a5b84bb91b9ef02cae9a5d1fffae 309 Pfam PF16199 Radical_SAM C-terminal domain 208 278 7.5E-18 T 06-07-2017 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AM402_RS13160 abb2a5b84bb91b9ef02cae9a5d1fffae 309 SMART SM00729 23 247 4.4E-35 T 06-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM402_RS13160 abb2a5b84bb91b9ef02cae9a5d1fffae 309 SUPERFAMILY SSF102114 13 263 2.35E-42 T 06-07-2017 AM402_RS13160 abb2a5b84bb91b9ef02cae9a5d1fffae 309 Pfam PF04055 Radical SAM superfamily 43 199 7.7E-14 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS13160 abb2a5b84bb91b9ef02cae9a5d1fffae 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 299 2.5E-127 T 06-07-2017 IPR005911 Protein YhcC-like GO:0051536 AM402_RS13455 a9618a1e549822a51842cd99ecda2ab3 184 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 6 184 2.0E-53 T 06-07-2017 AM402_RS13455 a9618a1e549822a51842cd99ecda2ab3 184 Pfam PF14002 YniB-like protein 20 184 2.7E-69 T 06-07-2017 IPR025229 YniB-like protein AM402_RS05495 a697b384d57ca7e6d7d3dde445b4b692 357 Pfam PF13362 Toprim domain 251 349 4.5E-16 T 06-07-2017 IPR006171 Toprim domain AM402_RS05495 a697b384d57ca7e6d7d3dde445b4b692 357 Pfam PF08273 Zinc-binding domain of primase-helicase 37 75 5.8E-14 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM402_RS05495 a697b384d57ca7e6d7d3dde445b4b692 357 SMART SM00778 37 75 5.2E-15 T 06-07-2017 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 AM402_RS05495 a697b384d57ca7e6d7d3dde445b4b692 357 SUPERFAMILY SSF57783 18 102 4.51E-7 T 06-07-2017 AM402_RS16620 297bd31a96f9edb489dafdc2beb55f02 179 SUPERFAMILY SSF50249 5 164 7.2E-61 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS16620 297bd31a96f9edb489dafdc2beb55f02 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 38.393 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS16620 297bd31a96f9edb489dafdc2beb55f02 179 Pfam PF00436 Single-strand binding protein family 6 112 2.4E-41 T 06-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM402_RS16620 297bd31a96f9edb489dafdc2beb55f02 179 Gene3D G3DSA:2.40.50.140 4 164 3.3E-58 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS16620 297bd31a96f9edb489dafdc2beb55f02 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 164 1.6E-61 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS16620 297bd31a96f9edb489dafdc2beb55f02 179 PIRSF PIRSF002070 2 161 3.8E-40 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS07475 d620d9d67e2e259427c1f302caf40809 305 SUPERFAMILY SSF54211 134 278 1.21E-53 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS07475 d620d9d67e2e259427c1f302caf40809 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.26 T 06-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS07475 d620d9d67e2e259427c1f302caf40809 305 Gene3D G3DSA:3.30.230.20 3 125 7.2E-46 T 06-07-2017 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS07475 d620d9d67e2e259427c1f302caf40809 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 6.4E-109 T 06-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS07475 d620d9d67e2e259427c1f302caf40809 305 Gene3D G3DSA:3.30.1700.10 129 283 2.4E-62 T 06-07-2017 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS07475 d620d9d67e2e259427c1f302caf40809 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 7.0E-158 T 06-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM402_RS07475 d620d9d67e2e259427c1f302caf40809 305 SUPERFAMILY SSF54211 3 123 9.86E-42 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 Gene3D G3DSA:3.30.70.100 21 88 1.1E-22 T 06-07-2017 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 SUPERFAMILY SSF55008 17 89 3.8E-22 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 06-07-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 Pfam PF00403 Heavy-metal-associated domain 25 85 4.0E-16 T 06-07-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 91 2.7E-44 T 06-07-2017 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 1.8E-56 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 1.8E-56 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 1.8E-56 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 1.8E-56 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 1.8E-56 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS21815 6b3c60b7a59c21caec61e5c6db1f512f 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 1.8E-56 T 06-07-2017 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM402_RS12110 7faf40c56b916c6b40f5b9f449919ace 486 SUPERFAMILY SSF51161 27 173 4.36E-25 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS12110 7faf40c56b916c6b40f5b9f449919ace 486 Gene3D G3DSA:2.160.10.10 124 175 7.5E-10 T 06-07-2017 AM402_RS12110 7faf40c56b916c6b40f5b9f449919ace 486 Gene3D G3DSA:2.160.10.10 43 123 2.9E-16 T 06-07-2017 AM402_RS12110 7faf40c56b916c6b40f5b9f449919ace 486 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 44 79 0.0016 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS12110 7faf40c56b916c6b40f5b9f449919ace 486 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 145 6.0E-5 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS16190 d8ec09b3304a596cb20117e8bce39933 114 Gene3D G3DSA:1.20.1300.10 1 114 4.0E-39 T 06-07-2017 AM402_RS16190 d8ec09b3304a596cb20117e8bce39933 114 SUPERFAMILY SSF81343 4 114 1.96E-28 T 06-07-2017 AM402_RS16190 d8ec09b3304a596cb20117e8bce39933 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 105 1.8E-6 T 06-07-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16190 d8ec09b3304a596cb20117e8bce39933 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 5.6E-35 T 06-07-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM402_RS16190 d8ec09b3304a596cb20117e8bce39933 114 PIRSF PIRSF000169 1 114 8.0E-40 T 06-07-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM402_RS15670 64db183acec31aed976a14b37f8ba649 360 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 06-07-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM402_RS15670 64db183acec31aed976a14b37f8ba649 360 SUPERFAMILY SSF53383 14 354 1.65E-82 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS15670 64db183acec31aed976a14b37f8ba649 360 Pfam PF00155 Aminotransferase class I and II 50 352 6.7E-60 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS15670 64db183acec31aed976a14b37f8ba649 360 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 354 3.1E-121 T 06-07-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM402_RS15670 64db183acec31aed976a14b37f8ba649 360 Gene3D G3DSA:3.90.1150.10 256 354 3.8E-22 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS15670 64db183acec31aed976a14b37f8ba649 360 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 54.624 T 06-07-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM402_RS15670 64db183acec31aed976a14b37f8ba649 360 Gene3D G3DSA:3.40.640.10 51 255 2.6E-71 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS03690 a702f79cb46d024dd55ea946f22ee099 322 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 11 317 3.3E-38 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 AM402_RS03690 a702f79cb46d024dd55ea946f22ee099 322 Pfam PF04754 Putative transposase, YhgA-like 10 202 1.3E-61 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like AM402_RS08705 e04eafcaa7cc62b17a350790637a3254 362 SUPERFAMILY SSF52540 3 245 2.13E-86 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08705 e04eafcaa7cc62b17a350790637a3254 362 Pfam PF00005 ABC transporter 18 164 6.5E-38 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS08705 e04eafcaa7cc62b17a350790637a3254 362 SUPERFAMILY SSF50331 239 335 4.53E-10 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AM402_RS08705 e04eafcaa7cc62b17a350790637a3254 362 SMART SM00382 27 214 9.2E-17 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS08705 e04eafcaa7cc62b17a350790637a3254 362 Gene3D G3DSA:3.40.50.300 3 245 1.7E-82 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS08705 e04eafcaa7cc62b17a350790637a3254 362 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS08705 e04eafcaa7cc62b17a350790637a3254 362 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 9.6E-120 T 06-07-2017 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 8.1E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 8.1E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 8.1E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 8.1E-7 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 Gene3D G3DSA:1.10.150.240 21 90 1.8E-31 T 06-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 6.1E-27 T 06-07-2017 IPR023214 HAD-like domain AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 SUPERFAMILY SSF56784 6 216 8.54E-50 T 06-07-2017 IPR023214 HAD-like domain AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 191 5.3E-12 T 06-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 Gene3D G3DSA:3.40.50.1000 5 20 9.3E-38 T 06-07-2017 IPR023214 HAD-like domain AM402_RS13460 7132de884797b5578e3f3e2a53f689f6 222 Gene3D G3DSA:3.40.50.1000 95 216 9.3E-38 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15950 313a4d36855b9dadb33a355faf4808f6 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 9.4E-59 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM402_RS15950 313a4d36855b9dadb33a355faf4808f6 228 SUPERFAMILY SSF52540 1 208 1.06E-59 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15950 313a4d36855b9dadb33a355faf4808f6 228 Pfam PF13500 AAA domain 3 208 3.3E-36 T 06-07-2017 AM402_RS15950 313a4d36855b9dadb33a355faf4808f6 228 PIRSF PIRSF006755 1 227 1.0E-80 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM402_RS15950 313a4d36855b9dadb33a355faf4808f6 228 Gene3D G3DSA:3.40.50.300 2 210 2.5E-76 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15950 313a4d36855b9dadb33a355faf4808f6 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 209 28.983 T 06-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM402_RS21180 d052b64981331819602fc1a845a49227 35 Pfam PF12703 Toxin of toxin-antitoxin type 1 system 8 33 8.1E-8 T 06-07-2017 IPR024640 Toxin-antitoxin type 1 system, toxin component AM402_RS19280 7a6bd7aac5937edefd62d02569a584f2 260 SUPERFAMILY SSF53335 52 170 2.01E-26 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS19280 7a6bd7aac5937edefd62d02569a584f2 260 SUPERFAMILY SSF53335 198 240 2.01E-26 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS19280 7a6bd7aac5937edefd62d02569a584f2 260 Gene3D G3DSA:3.40.50.150 11 243 4.3E-29 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS19280 7a6bd7aac5937edefd62d02569a584f2 260 Pfam PF08241 Methyltransferase domain 64 158 6.4E-14 T 06-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM402_RS07760 850870b29c3bf1fa5ec1cb6d1492e6cf 99 SMART SM00530 8 65 0.0077 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS07760 850870b29c3bf1fa5ec1cb6d1492e6cf 99 Gene3D G3DSA:1.10.260.40 7 53 2.9E-8 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS07760 850870b29c3bf1fa5ec1cb6d1492e6cf 99 SUPERFAMILY SSF47413 6 55 4.29E-8 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 689 26.435 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 Gene3D G3DSA:1.10.730.10 582 679 1.8E-5 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 1.8E-36 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.8E-36 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 1.8E-36 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 1.8E-36 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.8E-36 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 Pfam PF05746 DALR anticodon binding domain 582 680 3.2E-8 T 06-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 SUPERFAMILY SSF109604 339 492 1.27E-14 T 06-07-2017 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 1.0E-210 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS03335 8870dc2db3fc9195ee5f31d68ca129dc 690 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 690 0.0 T 06-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM402_RS02560 e7962cc41c54c2dd7b53c0a090da5105 499 Pfam PF01384 Phosphate transporter family 30 485 7.4E-86 T 06-07-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 SUPERFAMILY SSF50129 32 127 4.0E-30 T 06-07-2017 IPR011032 GroES-like AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 Hamap MF_00580 10 kDa chaperonin [groS]. 33 127 23.468 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 PRINTS PR00297 10kDa chaperonin signature 113 126 1.3E-26 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 PRINTS PR00297 10kDa chaperonin signature 91 103 1.3E-26 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 PRINTS PR00297 10kDa chaperonin signature 34 49 1.3E-26 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 PRINTS PR00297 10kDa chaperonin signature 56 77 1.3E-26 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 Pfam PF00166 Chaperonin 10 Kd subunit 33 126 1.9E-28 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 ProSitePatterns PS00681 Chaperonins cpn10 signature. 34 58 - T 06-07-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 SMART SM00883 33 126 9.9E-48 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM402_RS04950 c9635ad5b70f99ef87a5e223626159c3 128 Gene3D G3DSA:2.30.33.40 32 127 6.8E-31 T 06-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM402_RS16055 210eaba83ddb38681b5961f6294c9960 488 SUPERFAMILY SSF52540 5 225 8.74E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16055 210eaba83ddb38681b5961f6294c9960 488 Pfam PF00005 ABC transporter 23 163 8.1E-20 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS16055 210eaba83ddb38681b5961f6294c9960 488 Pfam PF00005 ABC transporter 276 428 1.2E-23 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS16055 210eaba83ddb38681b5961f6294c9960 488 SMART SM00382 285 479 9.1E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS16055 210eaba83ddb38681b5961f6294c9960 488 SMART SM00382 28 220 1.8E-7 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS16055 210eaba83ddb38681b5961f6294c9960 488 SUPERFAMILY SSF52540 260 482 1.11E-40 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16055 210eaba83ddb38681b5961f6294c9960 488 Gene3D G3DSA:3.40.50.300 263 481 1.5E-38 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16055 210eaba83ddb38681b5961f6294c9960 488 Gene3D G3DSA:3.40.50.300 6 225 7.0E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02255 89c9e952d5e0a3484c3f60208f3049fb 555 SMART SM00382 128 292 3.3E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS02255 89c9e952d5e0a3484c3f60208f3049fb 555 Pfam PF13401 AAA domain 126 275 4.2E-29 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS02255 89c9e952d5e0a3484c3f60208f3049fb 555 Pfam PF11426 Tn7 transposition regulator TnsC 508 553 7.6E-12 T 06-07-2017 IPR021542 Tn7 transposition regulator TnsC AM402_RS02255 89c9e952d5e0a3484c3f60208f3049fb 555 Gene3D G3DSA:3.40.50.300 130 254 5.9E-8 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02255 89c9e952d5e0a3484c3f60208f3049fb 555 SUPERFAMILY SSF52540 117 376 2.29E-11 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06630 769647bbc6f8fd069ed01b20736818ad 117 Gene3D G3DSA:1.10.260.40 18 89 2.5E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06630 769647bbc6f8fd069ed01b20736818ad 117 Pfam PF01381 Helix-turn-helix 30 84 9.3E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS06630 769647bbc6f8fd069ed01b20736818ad 117 SUPERFAMILY SSF47413 22 90 7.17E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06630 769647bbc6f8fd069ed01b20736818ad 117 SMART SM00530 29 84 1.1E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS15235 a8130218c2e13034c9fe4681da32d964 139 Pfam PF08786 Domain of unknown function (DUF1795) 7 132 3.9E-29 T 06-07-2017 IPR014894 Protein DcrB AM402_RS15235 a8130218c2e13034c9fe4681da32d964 139 Gene3D G3DSA:3.40.1000.10 1 138 9.6E-33 T 06-07-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 AM402_RS15235 a8130218c2e13034c9fe4681da32d964 139 SUPERFAMILY SSF55724 1 138 6.28E-23 T 06-07-2017 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 AM402_RS15010 88b59aa4ee0c7d316cd42d22b3643f88 683 Gene3D G3DSA:3.40.50.300 394 491 5.0E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15010 88b59aa4ee0c7d316cd42d22b3643f88 683 Gene3D G3DSA:3.40.50.300 195 333 5.0E-60 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15010 88b59aa4ee0c7d316cd42d22b3643f88 683 Gene3D G3DSA:3.40.50.300 497 675 7.4E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15010 88b59aa4ee0c7d316cd42d22b3643f88 683 SUPERFAMILY SSF52540 195 316 6.15E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15010 88b59aa4ee0c7d316cd42d22b3643f88 683 SUPERFAMILY SSF52540 384 674 6.15E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15010 88b59aa4ee0c7d316cd42d22b3643f88 683 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 1.2E-63 T 06-07-2017 IPR022161 DNA helicase IV, N-terminal domain AM402_RS15010 88b59aa4ee0c7d316cd42d22b3643f88 683 Pfam PF13361 UvrD-like helicase C-terminal domain 567 662 2.2E-12 T 06-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM402_RS15010 88b59aa4ee0c7d316cd42d22b3643f88 683 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 489 3.1E-42 T 06-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AM402_RS04280 aa980b50e0c43af26bf89e2f300aa682 410 SUPERFAMILY SSF52266 246 407 1.53E-28 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS04280 aa980b50e0c43af26bf89e2f300aa682 410 SUPERFAMILY SSF52266 75 110 1.53E-28 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS04280 aa980b50e0c43af26bf89e2f300aa682 410 Gene3D G3DSA:3.40.50.1110 240 408 1.3E-30 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS04280 aa980b50e0c43af26bf89e2f300aa682 410 Gene3D G3DSA:3.40.50.1110 75 102 1.3E-30 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS04280 aa980b50e0c43af26bf89e2f300aa682 410 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 246 393 2.5E-14 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS05580 0115e7f8693abca2f072b835234eea57 353 Gene3D G3DSA:3.40.1090.10 28 198 4.3E-6 T 06-07-2017 AM402_RS05580 0115e7f8693abca2f072b835234eea57 353 SUPERFAMILY SSF52151 22 298 9.94E-44 T 06-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM402_RS05580 0115e7f8693abca2f072b835234eea57 353 Pfam PF01734 Patatin-like phospholipase 28 196 1.1E-18 T 06-07-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AM402_RS18170 d394be00c8418ca45dddca9644becd5a 188 Gene3D G3DSA:1.10.443.10 5 174 1.7E-40 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS18170 d394be00c8418ca45dddca9644becd5a 188 SUPERFAMILY SSF56349 2 184 2.0E-44 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS18170 d394be00c8418ca45dddca9644becd5a 188 Pfam PF00589 Phage integrase family 5 174 1.8E-44 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS06805 03f6a390c26861a10b94dc40650b5df2 173 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 146 2.4E-25 T 06-07-2017 IPR002810 NfeD-like, C-terminal domain AM402_RS06805 03f6a390c26861a10b94dc40650b5df2 173 Gene3D G3DSA:2.40.50.140 92 146 8.7E-12 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS06805 03f6a390c26861a10b94dc40650b5df2 173 SUPERFAMILY SSF141322 90 147 2.75E-7 T 06-07-2017 AM402_RS01885 fb6ac2482fabfc53f24c5a615f5dd26b 362 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 3.5E-141 T 06-07-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM402_RS01885 fb6ac2482fabfc53f24c5a615f5dd26b 362 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 362 97.105 T 06-07-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM402_RS01885 fb6ac2482fabfc53f24c5a615f5dd26b 362 Gene3D G3DSA:3.40.50.300 1 174 1.3E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01885 fb6ac2482fabfc53f24c5a615f5dd26b 362 Gene3D G3DSA:3.40.50.300 233 334 1.3E-36 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS01885 fb6ac2482fabfc53f24c5a615f5dd26b 362 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 06-07-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM402_RS01885 fb6ac2482fabfc53f24c5a615f5dd26b 362 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 357 1.7E-44 T 06-07-2017 IPR003395 RecF/RecN/SMC, N-terminal AM402_RS01885 fb6ac2482fabfc53f24c5a615f5dd26b 362 ProSitePatterns PS00618 RecF protein signature 2. 301 319 - T 06-07-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM402_RS01885 fb6ac2482fabfc53f24c5a615f5dd26b 362 SUPERFAMILY SSF52540 1 334 1.74E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS14185 35a0fd10b004154fd011fcffde88b93c 59 Pfam PF13973 Domain of unknown function (DUF4222) 7 59 4.7E-19 T 06-07-2017 IPR025317 Protein of unknown function DUF4222 AM402_RS14910 9739cd51635e587aed416e54cb791daa 251 Pfam PF13649 Methyltransferase domain 39 135 6.3E-9 T 06-07-2017 AM402_RS14910 9739cd51635e587aed416e54cb791daa 251 Gene3D G3DSA:3.40.50.150 8 242 1.3E-19 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14910 9739cd51635e587aed416e54cb791daa 251 SUPERFAMILY SSF53335 22 247 6.46E-22 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS13400 000c4680870aca6c716f15b9871609a3 303 Gene3D G3DSA:2.60.40.1090 184 303 1.3E-27 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS13400 000c4680870aca6c716f15b9871609a3 303 Pfam PF00419 Fimbrial protein 184 302 2.6E-8 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS13400 000c4680870aca6c716f15b9871609a3 303 SUPERFAMILY SSF49401 24 181 2.73E-38 T 06-07-2017 IPR008966 Adhesion domain AM402_RS13400 000c4680870aca6c716f15b9871609a3 303 Gene3D G3DSA:2.60.40.1090 23 181 8.3E-53 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS13400 000c4680870aca6c716f15b9871609a3 303 SUPERFAMILY SSF49401 184 303 2.53E-21 T 06-07-2017 IPR008966 Adhesion domain AM402_RS13400 000c4680870aca6c716f15b9871609a3 303 Pfam PF09160 FimH, mannose binding 25 170 4.9E-60 T 06-07-2017 IPR015243 FimH, mannose-binding domain AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 SUPERFAMILY SSF53335 107 393 4.02E-52 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 134 139 - T 06-07-2017 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 Pfam PF01555 DNA methylase 130 390 1.5E-22 T 06-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 Pfam PF14338 Mrr N-terminal domain 17 95 1.4E-8 T 06-07-2017 IPR025745 Restriction system protein Mrr-like N-terminal domain AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 162 182 7.4E-15 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 129 143 7.4E-15 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 352 370 7.4E-15 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 375 395 7.4E-15 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 333 350 7.4E-15 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 Gene3D G3DSA:3.40.50.150 302 389 2.2E-33 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS21420 589ddd90d938683d80e6a89bcd2c1ad7 415 Gene3D G3DSA:3.40.50.150 127 260 2.2E-33 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS18120 3f26491831b541eb9d216d5a1deb71b2 524 TIGRFAM TIGR00819 ydaH: AbgT transporter family 5 519 5.5E-234 T 06-07-2017 IPR011540 AbgT, Proteobacteria GO:0015558|GO:1902604 AM402_RS18120 3f26491831b541eb9d216d5a1deb71b2 524 Pfam PF03806 AbgT putative transporter family 10 519 7.3E-219 T 06-07-2017 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AM402_RS12300 fac7b817dee17e9d11e83c4308227848 157 Gene3D G3DSA:2.30.110.20 1 152 1.4E-16 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS12300 fac7b817dee17e9d11e83c4308227848 157 SUPERFAMILY SSF141452 5 155 1.28E-27 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS12300 fac7b817dee17e9d11e83c4308227848 157 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 153 6.7E-47 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS12300 fac7b817dee17e9d11e83c4308227848 157 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 9.5E-16 T 06-07-2017 IPR008514 Type VI secretion system effector, Hcp AM402_RS21115 e5ad7341e8340612adbbf9d43c8c1d2e 609 SUPERFAMILY SSF52540 107 552 2.5E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21115 e5ad7341e8340612adbbf9d43c8c1d2e 609 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 111 557 1.4E-102 T 06-07-2017 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AM402_RS21115 e5ad7341e8340612adbbf9d43c8c1d2e 609 Pfam PF04986 Putative transposase 562 597 3.4E-7 T 06-07-2017 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 AM402_RS21115 e5ad7341e8340612adbbf9d43c8c1d2e 609 Gene3D G3DSA:3.40.50.300 105 209 1.5E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21115 e5ad7341e8340612adbbf9d43c8c1d2e 609 Gene3D G3DSA:3.40.50.300 348 551 1.5E-52 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00255 11d06635deb917737997bd2c43c41dd6 397 SUPERFAMILY SSF103473 3 388 2.35E-30 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS00255 11d06635deb917737997bd2c43c41dd6 397 Gene3D G3DSA:1.20.1250.20 4 184 1.0E-11 T 06-07-2017 AM402_RS00255 11d06635deb917737997bd2c43c41dd6 397 Gene3D G3DSA:1.20.1250.20 211 384 6.0E-11 T 06-07-2017 AM402_RS00255 11d06635deb917737997bd2c43c41dd6 397 Pfam PF07690 Major Facilitator Superfamily 5 346 3.4E-16 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS13320 28d537ae507b4953e25635d2247bb265 133 SUPERFAMILY SSF103481 38 126 3.14E-11 T 06-07-2017 AM402_RS13320 28d537ae507b4953e25635d2247bb265 133 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 3 129 22.585 T 06-07-2017 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF AM402_RS13320 28d537ae507b4953e25635d2247bb265 133 Pfam PF00892 EamA-like transporter family 51 124 8.1E-8 T 06-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AM402_RS09605 22eea744dd9fd0d6c76ee548b610d11f 297 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 06-07-2017 IPR000540 Flagellar motor protein MotA, conserved site AM402_RS09605 22eea744dd9fd0d6c76ee548b610d11f 297 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 1.9E-11 T 06-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM402_RS09605 22eea744dd9fd0d6c76ee548b610d11f 297 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 282 6.4E-115 T 06-07-2017 IPR022522 Flagellar motor stator, MotA AM402_RS19730 e205a28e7a7f560221963bbdf07f1fa6 326 Pfam PF01699 Sodium/calcium exchanger protein 6 142 4.0E-20 T 06-07-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM402_RS19730 e205a28e7a7f560221963bbdf07f1fa6 326 Pfam PF01699 Sodium/calcium exchanger protein 178 318 1.3E-23 T 06-07-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AM402_RS19730 e205a28e7a7f560221963bbdf07f1fa6 326 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 314 2.2E-61 T 06-07-2017 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AM402_RS08200 22664a1b92560a19242b5db22fe596b8 307 Pfam PF03547 Membrane transport protein 160 298 1.9E-11 T 06-07-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM402_RS08200 22664a1b92560a19242b5db22fe596b8 307 Pfam PF03547 Membrane transport protein 6 153 1.4E-9 T 06-07-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM402_RS15315 ac02ff402fb9d95bacb80685082f836a 1182 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 35 1179 4.7E-283 T 06-07-2017 IPR017731 Type VI secretion system, IcmF AM402_RS15315 ac02ff402fb9d95bacb80685082f836a 1182 Pfam PF06744 Type VI secretion protein IcmF C-terminal 934 1129 5.7E-53 T 06-07-2017 IPR010623 Type VI secretion system IcmF, C-terminal AM402_RS15315 ac02ff402fb9d95bacb80685082f836a 1182 Pfam PF06761 Intracellular multiplication and human macrophage-killing 515 827 1.7E-71 T 06-07-2017 IPR009612 ImcF-related AM402_RS15315 ac02ff402fb9d95bacb80685082f836a 1182 Pfam PF14331 ImcF-related N-terminal domain 213 464 2.0E-64 T 06-07-2017 IPR025743 ImcF-related, N-terminal domain AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 309 1.3E-29 T 06-07-2017 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 SMART SM00354 5 75 2.5E-25 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 06-07-2017 AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 Gene3D G3DSA:3.40.50.2300 174 330 9.8E-43 T 06-07-2017 AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 Gene3D G3DSA:3.40.50.2300 62 173 4.2E-40 T 06-07-2017 AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 Gene3D G3DSA:1.10.260.40 4 59 5.7E-16 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 SUPERFAMILY SSF47413 4 63 5.63E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 SUPERFAMILY SSF53822 63 314 3.43E-60 T 06-07-2017 IPR028082 Periplasmic binding protein-like I AM402_RS04260 ef240bdb79fb07805f68754069d6436a 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.4E-15 T 06-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM402_RS19425 d9eb1a653d7017667ebf111ca03ad086 215 SMART SM00855 3 157 1.3E-22 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AM402_RS19425 d9eb1a653d7017667ebf111ca03ad086 215 SUPERFAMILY SSF53254 1 208 1.7E-56 T 06-07-2017 IPR029033 Histidine phosphatase superfamily AM402_RS19425 d9eb1a653d7017667ebf111ca03ad086 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 5.5E-57 T 06-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AM402_RS19425 d9eb1a653d7017667ebf111ca03ad086 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 51.194 T 06-07-2017 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 AM402_RS19425 d9eb1a653d7017667ebf111ca03ad086 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 06-07-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AM402_RS19425 d9eb1a653d7017667ebf111ca03ad086 215 Gene3D G3DSA:3.40.50.1240 2 209 9.4E-60 T 06-07-2017 IPR029033 Histidine phosphatase superfamily AM402_RS11130 9ef7b0919998b9ee5d10f45b2284f93f 127 Pfam PF05656 Protein of unknown function (DUF805) 12 125 3.4E-33 T 06-07-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 AM402_RS20970 0f3a23bfe849bf05df362732427afee0 992 Pfam PF07514 Putative helicase 45 357 5.3E-125 T 06-07-2017 IPR011119 Uncharacterised domain, helicase/relaxase, putative AM402_RS20970 0f3a23bfe849bf05df362732427afee0 992 SUPERFAMILY SSF109604 202 280 8.79E-7 T 06-07-2017 AM402_RS20970 0f3a23bfe849bf05df362732427afee0 992 SUPERFAMILY SSF109604 83 165 8.79E-7 T 06-07-2017 AM402_RS21130 e66331ed6cdf2b83f0a72b6131911c19 373 Pfam PF11843 Protein of unknown function (DUF3363) 1 371 1.5E-143 T 06-07-2017 IPR021795 Protein of unknown function DUF3363 AM402_RS11885 b5770241168e94c0e3c918027133a415 186 Pfam PF13505 Outer membrane protein beta-barrel domain 27 186 4.4E-16 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel AM402_RS11885 b5770241168e94c0e3c918027133a415 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 143 164 1.7E-5 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS11885 b5770241168e94c0e3c918027133a415 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 43 55 1.7E-5 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS11885 b5770241168e94c0e3c918027133a415 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 91 114 1.7E-5 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS11885 b5770241168e94c0e3c918027133a415 186 SUPERFAMILY SSF56925 31 186 6.8E-14 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS11885 b5770241168e94c0e3c918027133a415 186 Gene3D G3DSA:2.40.160.20 31 186 3.9E-14 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS17650 ea79869a59d9afa1ddb745415350ce48 212 Pfam PF01464 Transglycosylase SLT domain 30 157 7.8E-10 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS17650 ea79869a59d9afa1ddb745415350ce48 212 Gene3D G3DSA:1.10.530.10 102 157 1.1E-11 T 06-07-2017 AM402_RS17650 ea79869a59d9afa1ddb745415350ce48 212 Gene3D G3DSA:1.10.530.10 27 60 1.1E-11 T 06-07-2017 AM402_RS17650 ea79869a59d9afa1ddb745415350ce48 212 SUPERFAMILY SSF53955 27 74 3.0E-16 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS17650 ea79869a59d9afa1ddb745415350ce48 212 SUPERFAMILY SSF53955 102 176 3.0E-16 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS07360 b53a73fff8fbc34a44d5f4129e053921 200 Pfam PF00694 Aconitase C-terminal domain 1 125 1.3E-39 T 06-07-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM402_RS07360 b53a73fff8fbc34a44d5f4129e053921 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.812 T 06-07-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM402_RS07360 b53a73fff8fbc34a44d5f4129e053921 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 6.1E-94 T 06-07-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM402_RS07360 b53a73fff8fbc34a44d5f4129e053921 200 Gene3D G3DSA:3.20.19.10 1 195 7.0E-46 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM402_RS07360 b53a73fff8fbc34a44d5f4129e053921 200 SUPERFAMILY SSF52016 1 194 5.3E-60 T 06-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM402_RS12825 5658ae4cd4c2cd62b9edb1061ee187ee 150 Gene3D G3DSA:3.40.50.360 40 144 2.6E-33 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS12825 5658ae4cd4c2cd62b9edb1061ee187ee 150 Gene3D G3DSA:3.40.50.360 1 37 8.8E-4 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS12825 5658ae4cd4c2cd62b9edb1061ee187ee 150 SUPERFAMILY SSF52218 3 142 6.19E-30 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS12825 5658ae4cd4c2cd62b9edb1061ee187ee 150 Pfam PF02525 Flavodoxin-like fold 40 139 3.8E-22 T 06-07-2017 IPR003680 Flavodoxin-like fold AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 444 2.0E-86 T 06-07-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 Gene3D G3DSA:3.40.192.10 68 188 2.2E-60 T 06-07-2017 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 PIRSF PIRSF000185 22 446 3.2E-115 T 06-07-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 06-07-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 SMART SM00839 204 444 1.2E-93 T 06-07-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 Gene3D G3DSA:3.40.50.720 209 371 1.3E-60 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 2.8E-49 T 06-07-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 SUPERFAMILY SSF53223 8 196 2.49E-72 T 06-07-2017 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 SUPERFAMILY SSF51735 202 445 2.39E-75 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 1.6E-32 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 1.6E-32 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 1.6E-32 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 1.6E-32 T 06-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 Gene3D G3DSA:1.10.285.10 372 445 1.8E-26 T 06-07-2017 AM402_RS02575 0588ca45d1cff8e1f71aa76726b498b6 446 Gene3D G3DSA:1.10.285.10 8 67 4.8E-28 T 06-07-2017 AM402_RS12525 9a7794a9e9e28f4b6d03412a1df34c5b 203 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 180 1.4E-13 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM402_RS12525 9a7794a9e9e28f4b6d03412a1df34c5b 203 SMART SM00478 47 199 4.5E-6 T 06-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM402_RS12525 9a7794a9e9e28f4b6d03412a1df34c5b 203 Gene3D G3DSA:1.10.340.30 39 147 1.5E-25 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM402_RS12525 9a7794a9e9e28f4b6d03412a1df34c5b 203 Gene3D G3DSA:1.10.1670.10 148 199 2.1E-8 T 06-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM402_RS12525 9a7794a9e9e28f4b6d03412a1df34c5b 203 SUPERFAMILY SSF48150 32 196 7.68E-35 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM402_RS09545 2fcb03d5f842801cefb9750f8d5a23a1 84 Pfam PF13991 BssS protein family 11 81 1.1E-37 T 06-07-2017 IPR025730 Biofilm regulator BssS AM402_RS09545 2fcb03d5f842801cefb9750f8d5a23a1 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 8.0E-29 T 06-07-2017 IPR025730 Biofilm regulator BssS AM402_RS13760 3027ec7c7f21177a98f724701a9f1504 132 Gene3D G3DSA:3.90.1720.10 12 127 1.5E-5 T 06-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 6.4E-6 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 6.4E-6 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 101.73 T 06-07-2017 IPR017757 Transcriptional repressor BetI AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 Pfam PF13977 Bacterial transcriptional repressor 85 192 7.6E-34 T 06-07-2017 AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 SUPERFAMILY SSF48498 82 194 2.11E-19 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 3.4E-12 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 2.6E-76 T 06-07-2017 IPR017757 Transcriptional repressor BetI AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 Gene3D G3DSA:1.10.357.10 1 194 3.1E-44 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS11015 8d88b192ac1a858e5509d561703d6497 200 SUPERFAMILY SSF46689 5 76 2.31E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS16025 43e891ed107337114fadd71c6dc42ec7 168 Gene3D G3DSA:3.40.1590.10 3 163 1.2E-45 T 06-07-2017 IPR023127 NMB0488-like domain AM402_RS16025 43e891ed107337114fadd71c6dc42ec7 168 SUPERFAMILY SSF160207 1 163 4.71E-47 T 06-07-2017 IPR023127 NMB0488-like domain AM402_RS16025 43e891ed107337114fadd71c6dc42ec7 168 Pfam PF07262 Protein of unknown function (DUF1436) 10 163 4.0E-37 T 06-07-2017 IPR009888 Immunity protein CdiI-o11 AM402_RS10790 fe8f5b83d2a82908f2f51860be662c31 294 PIRSF PIRSF016020 14 291 8.0E-53 T 06-07-2017 IPR025532 Glucose-6-phosphate 1-epimerase AM402_RS10790 fe8f5b83d2a82908f2f51860be662c31 294 Gene3D G3DSA:2.70.98.10 11 280 3.6E-82 T 06-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AM402_RS10790 fe8f5b83d2a82908f2f51860be662c31 294 Pfam PF01263 Aldose 1-epimerase 29 278 6.9E-47 T 06-07-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM402_RS10790 fe8f5b83d2a82908f2f51860be662c31 294 SUPERFAMILY SSF74650 7 281 1.44E-70 T 06-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM402_RS11765 1d2c14852debf04d45d7be9cb690be98 142 SMART SM00347 22 123 1.1E-24 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS11765 1d2c14852debf04d45d7be9cb690be98 142 Pfam PF01047 MarR family 29 87 2.1E-14 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS11765 1d2c14852debf04d45d7be9cb690be98 142 Gene3D G3DSA:1.10.10.10 3 137 3.5E-33 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11765 1d2c14852debf04d45d7be9cb690be98 142 SUPERFAMILY SSF46785 4 138 9.23E-31 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11765 1d2c14852debf04d45d7be9cb690be98 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.9E-23 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS11765 1d2c14852debf04d45d7be9cb690be98 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.9E-23 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS11765 1d2c14852debf04d45d7be9cb690be98 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.9E-23 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS11765 1d2c14852debf04d45d7be9cb690be98 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.9E-23 T 06-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM402_RS13590 ef6586f910168a92277723f40ded0453 186 Gene3D G3DSA:3.40.50.300 7 179 5.6E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13590 ef6586f910168a92277723f40ded0453 186 Pfam PF13521 AAA domain 7 174 3.1E-43 T 06-07-2017 AM402_RS13590 ef6586f910168a92277723f40ded0453 186 SUPERFAMILY SSF52540 5 179 1.51E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.5E-39 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.5E-39 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.5E-39 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.28 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 7.0E-18 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 Gene3D G3DSA:2.40.50.100 20 82 2.8E-32 T 06-07-2017 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 SUPERFAMILY SSF110324 2 80 1.46E-34 T 06-07-2017 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 06-07-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00200 5c5579a3fd47f87d40c456630ebe86b7 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.8E-39 T 06-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS21450 c516fef9a900980e9c6e73c0644e017c 181 SUPERFAMILY SSF48695 36 87 8.84E-5 T 06-07-2017 IPR011031 Multihaem cytochrome AM402_RS06760 3c1c1971ba4689719d516f151c00c6bd 586 Gene3D G3DSA:3.40.50.720 415 560 6.5E-33 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS06760 3c1c1971ba4689719d516f151c00c6bd 586 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 295 2.2E-75 T 06-07-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM402_RS06760 3c1c1971ba4689719d516f151c00c6bd 586 Pfam PF00999 Sodium/hydrogen exchanger family 14 385 1.4E-78 T 06-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM402_RS06760 3c1c1971ba4689719d516f151c00c6bd 586 Pfam PF02254 TrkA-N domain 424 545 3.5E-20 T 06-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM402_RS06760 3c1c1971ba4689719d516f151c00c6bd 586 SUPERFAMILY SSF51735 421 560 2.34E-22 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15250 793a7c8673d0d85b1d495fcb35961a4f 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 7 160 3.7E-57 T 06-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM402_RS15250 793a7c8673d0d85b1d495fcb35961a4f 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 5.5E-58 T 06-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM402_RS15250 793a7c8673d0d85b1d495fcb35961a4f 166 PIRSF PIRSF028301 1 166 1.8E-62 T 06-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM402_RS02890 6a417afe17e17e261b30b1ed91fc30ae 188 Pfam PF13505 Outer membrane protein beta-barrel domain 13 188 2.1E-12 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel AM402_RS02890 6a417afe17e17e261b30b1ed91fc30ae 188 SUPERFAMILY SSF56925 32 188 8.37E-19 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS02890 6a417afe17e17e261b30b1ed91fc30ae 188 Gene3D G3DSA:2.40.160.20 31 188 2.9E-28 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS02890 6a417afe17e17e261b30b1ed91fc30ae 188 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 50 62 1.6E-18 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS02890 6a417afe17e17e261b30b1ed91fc30ae 188 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 142 163 1.6E-18 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS02890 6a417afe17e17e261b30b1ed91fc30ae 188 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 94 117 1.6E-18 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS16540 3b4b4584cb2bc770730f288e77ca3ad1 96 Gene3D G3DSA:3.30.50.20 20 93 2.8E-36 T 06-07-2017 AM402_RS16540 3b4b4584cb2bc770730f288e77ca3ad1 96 Pfam PF07102 Protein of unknown function (DUF1364) 3 93 2.1E-44 T 06-07-2017 IPR010774 Protein of unknown function DUF1364 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 SUPERFAMILY SSF53067 207 276 3.51E-30 T 06-07-2017 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 SUPERFAMILY SSF53067 328 446 3.51E-30 T 06-07-2017 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 Gene3D G3DSA:3.30.420.40 2 43 1.2E-31 T 06-07-2017 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 Gene3D G3DSA:3.30.420.40 85 218 1.2E-31 T 06-07-2017 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 Gene3D G3DSA:3.30.420.40 219 241 3.1E-15 T 06-07-2017 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 Gene3D G3DSA:3.30.420.40 374 433 3.1E-15 T 06-07-2017 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 Pfam PF00012 Hsp70 protein 129 259 3.4E-11 T 06-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 06-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 SUPERFAMILY SSF53067 85 205 3.89E-27 T 06-07-2017 AM402_RS12370 b78613a5b3cfc251ef4184a720f91093 450 SUPERFAMILY SSF53067 1 44 3.89E-27 T 06-07-2017 AM402_RS03745 9ffa817b19d8e71b515230d621036b2c 196 Gene3D G3DSA:1.20.1590.10 1 194 1.4E-89 T 06-07-2017 IPR023381 YP001051499.1-like domain AM402_RS03745 9ffa817b19d8e71b515230d621036b2c 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 5.5E-81 T 06-07-2017 IPR007338 Protein of unknown function DUF416 AM402_RS05745 0aeb836d13f6d85d01c326ed04106190 151 SUPERFAMILY SSF158682 22 150 5.1E-19 T 06-07-2017 IPR029024 TerB-like AM402_RS05745 0aeb836d13f6d85d01c326ed04106190 151 Pfam PF05099 Tellurite resistance protein TerB 17 150 8.1E-24 T 06-07-2017 IPR007791 Co-chaperone DjlA, N-terminal AM402_RS05745 0aeb836d13f6d85d01c326ed04106190 151 Gene3D G3DSA:1.10.3680.10 19 150 1.6E-23 T 06-07-2017 IPR029024 TerB-like AM402_RS13850 8f0fa4aadb518780120e82acbe9c6345 112 SMART SM00507 13 82 6.0E-4 T 06-07-2017 IPR003615 HNH nuclease AM402_RS00765 53109d063a464b4300695c6b43a76914 112 Pfam PF04219 Protein of unknown function, DUF 10 98 4.1E-38 T 06-07-2017 IPR007335 Protein of unknown function DUF413 AM402_RS15650 8732972330f0647993f164cebe3a5fc9 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 79 7.2E-15 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM402_RS15650 8732972330f0647993f164cebe3a5fc9 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 192 4.9E-11 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal AM402_RS15650 8732972330f0647993f164cebe3a5fc9 206 Gene3D G3DSA:3.40.30.10 1 81 3.5E-24 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS15650 8732972330f0647993f164cebe3a5fc9 206 SUPERFAMILY SSF52833 1 84 5.38E-23 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS15650 8732972330f0647993f164cebe3a5fc9 206 SUPERFAMILY SSF47616 72 200 5.71E-29 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AM402_RS15650 8732972330f0647993f164cebe3a5fc9 206 Gene3D G3DSA:1.20.1050.10 82 201 4.1E-30 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AM402_RS10990 2476b444b1ffbed0450922c16cd2a4b8 867 Pfam PF13953 PapC C-terminal domain 785 849 2.4E-22 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS10990 2476b444b1ffbed0450922c16cd2a4b8 867 Pfam PF00577 Outer membrane usher protein 197 776 5.6E-201 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS10990 2476b444b1ffbed0450922c16cd2a4b8 867 SUPERFAMILY SSF141729 51 171 7.46E-26 T 06-07-2017 AM402_RS10990 2476b444b1ffbed0450922c16cd2a4b8 867 Pfam PF13954 PapC N-terminal domain 29 179 4.5E-40 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS12130 f518e431126d29d574c2aca7c25a1f30 105 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 97 21.576 T 06-07-2017 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AM402_RS12130 f518e431126d29d574c2aca7c25a1f30 105 Gene3D G3DSA:1.20.1070.10 2 100 5.6E-5 T 06-07-2017 AM402_RS12130 f518e431126d29d574c2aca7c25a1f30 105 Pfam PF06305 Protein of unknown function (DUF1049) 26 88 2.5E-20 T 06-07-2017 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AM402_RS01430 4f93df9123207a9ef05fa2cd97501489 134 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 57 132 2.4E-6 T 06-07-2017 AM402_RS01430 4f93df9123207a9ef05fa2cd97501489 134 SUPERFAMILY SSF55166 3 132 5.89E-13 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 AM402_RS15705 fc70c65a0435c6c352b4fd93263b5682 168 Pfam PF04073 Aminoacyl-tRNA editing domain 25 149 1.4E-23 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS15705 fc70c65a0435c6c352b4fd93263b5682 168 Gene3D G3DSA:3.90.960.10 4 158 1.1E-31 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS15705 fc70c65a0435c6c352b4fd93263b5682 168 SUPERFAMILY SSF55826 5 158 1.44E-34 T 06-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM402_RS18160 45a6c0c6b93c5c40f4f5d01ba5f7e05a 186 SUPERFAMILY SSF49401 39 185 2.63E-28 T 06-07-2017 IPR008966 Adhesion domain AM402_RS18160 45a6c0c6b93c5c40f4f5d01ba5f7e05a 186 Gene3D G3DSA:2.60.40.1090 39 185 4.0E-22 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS20530 1d006ab48eb68930c8bea9e8ee82bc48 55 Pfam PF13978 Protein of unknown function (DUF4223) 1 54 3.5E-35 T 06-07-2017 IPR025318 Protein of unknown function DUF4223 AM402_RS05715 67a5890a50cfbd8c967124d9a551fc10 314 SUPERFAMILY SSF51621 8 250 1.57E-28 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS05715 67a5890a50cfbd8c967124d9a551fc10 314 PIRSF PIRSF015582 2 310 5.8E-54 T 06-07-2017 IPR011206 Citrate lyase beta subunit-like AM402_RS05715 67a5890a50cfbd8c967124d9a551fc10 314 Gene3D G3DSA:3.20.20.60 10 250 6.5E-32 T 06-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM402_RS05715 67a5890a50cfbd8c967124d9a551fc10 314 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 5 300 5.0E-108 T 06-07-2017 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 Gene3D G3DSA:3.40.630.10 108 427 5.9E-116 T 06-07-2017 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 06-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 SUPERFAMILY SSF53187 108 427 1.07E-102 T 06-07-2017 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 3.8E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 3.8E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 3.8E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 3.8E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 3.8E-45 T 06-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 110 422 1.6E-100 T 06-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 PIRSF PIRSF036388 2 431 2.8E-218 T 06-07-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM402_RS08600 a92464314748330d43cea40cd13f77ef 431 Pfam PF12404 Peptidase 6 82 5.1E-33 T 06-07-2017 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AM402_RS03185 e006a3476d0938527baa51762b896260 240 SMART SM00448 5 116 1.1E-44 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS03185 e006a3476d0938527baa51762b896260 240 SUPERFAMILY SSF46894 132 234 2.32E-26 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS03185 e006a3476d0938527baa51762b896260 240 SUPERFAMILY SSF52172 3 126 2.42E-41 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS03185 e006a3476d0938527baa51762b896260 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.5E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS03185 e006a3476d0938527baa51762b896260 240 Pfam PF00072 Response regulator receiver domain 7 117 4.3E-30 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS03185 e006a3476d0938527baa51762b896260 240 Gene3D G3DSA:3.40.50.2300 2 126 5.5E-42 T 06-07-2017 AM402_RS03185 e006a3476d0938527baa51762b896260 240 Gene3D G3DSA:1.10.10.10 133 235 7.7E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS03185 e006a3476d0938527baa51762b896260 240 SMART SM00862 156 232 4.4E-22 T 06-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM402_RS01360 0a7460c785c9c63d9f00a517edc87c21 154 PIRSF PIRSF029208 1 146 5.2E-56 T 06-07-2017 IPR016912 Bacteriophage P2, GpU AM402_RS01360 0a7460c785c9c63d9f00a517edc87c21 154 Pfam PF06995 Phage P2 GpU 6 125 1.6E-43 T 06-07-2017 IPR009734 Myoviridae, GpU AM402_RS08125 6c3718d419808b85848603396e17c0b4 544 Pfam PF00474 Sodium:solute symporter family 44 462 2.6E-72 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS08125 6c3718d419808b85848603396e17c0b4 544 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 44 463 1.3E-122 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS11120 813e55e2e50a46c5f1b4b22f1820de98 147 Pfam PF04191 Phospholipid methyltransferase 41 134 4.4E-12 T 06-07-2017 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Gene3D G3DSA:2.40.40.20 1058 1236 2.3E-43 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Gene3D G3DSA:4.10.1200.10 1 28 6.5E-16 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 SUPERFAMILY SSF53706 4 1072 0.0 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Gene3D G3DSA:3.40.228.10 495 614 1.5E-91 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Gene3D G3DSA:3.40.228.10 225 337 1.5E-91 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 SUPERFAMILY SSF50692 1085 1236 5.2E-47 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1237 0.0 T 06-07-2017 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 SMART SM00926 43 105 6.6E-8 T 06-07-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 779 796 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 06-07-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Gene3D G3DSA:2.20.25.90 52 98 2.9E-32 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Pfam PF01568 Molydopterin dinucleotide binding domain 1090 1202 2.7E-21 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 9.0E-13 T 06-07-2017 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Gene3D G3DSA:3.40.50.740 654 729 7.9E-66 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Gene3D G3DSA:3.40.50.740 108 224 7.9E-66 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Gene3D G3DSA:3.40.50.740 761 836 7.9E-66 T 06-07-2017 AM402_RS20165 cb4f8d05358594e234e98474aaba59d8 1253 Pfam PF00384 Molybdopterin oxidoreductase 108 834 2.2E-172 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS11530 f071ac57a210db5814122c7d97e2c8c2 167 Pfam PF06576 Protein of unknown function (DUF1133) 44 149 7.8E-8 T 06-07-2017 IPR010557 Protein of unknown function DUF1133 AM402_RS02955 419a38573f70c3694b1a485d773f5ef0 330 PIRSF PIRSF017082 1 329 3.3E-87 T 06-07-2017 IPR005064 Bordetella uptake gene GO:0030288 AM402_RS02955 419a38573f70c3694b1a485d773f5ef0 330 SUPERFAMILY SSF53850 118 296 2.44E-8 T 06-07-2017 AM402_RS02955 419a38573f70c3694b1a485d773f5ef0 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 69 326 5.6E-48 T 06-07-2017 IPR005064 Bordetella uptake gene GO:0030288 AM402_RS12860 e22c147a51b73ac532bbe355618b3183 110 PIRSF PIRSF025560 1 110 1.3E-36 T 06-07-2017 IPR008309 Uncharacterised conserved protein UCP025560 AM402_RS12860 e22c147a51b73ac532bbe355618b3183 110 Pfam PF07027 Protein of unknown function (DUF1318) 20 110 2.4E-31 T 06-07-2017 IPR008309 Uncharacterised conserved protein UCP025560 AM402_RS05255 39dc7da5d05a1c8ca86d4ea7bedde1fd 302 SMART SM00479 51 217 4.5E-12 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS05255 39dc7da5d05a1c8ca86d4ea7bedde1fd 302 SUPERFAMILY SSF53098 49 221 3.85E-40 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS05255 39dc7da5d05a1c8ca86d4ea7bedde1fd 302 Pfam PF00929 Exonuclease 53 207 1.7E-12 T 06-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AM402_RS05255 39dc7da5d05a1c8ca86d4ea7bedde1fd 302 Gene3D G3DSA:3.30.420.10 49 211 1.1E-29 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS17250 3055f06c3e83c70e07935894ba19b836 412 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.868 T 06-07-2017 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM402_RS17250 3055f06c3e83c70e07935894ba19b836 412 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 3.2E-199 T 06-07-2017 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM402_RS17250 3055f06c3e83c70e07935894ba19b836 412 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 5.3E-109 T 06-07-2017 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AM402_RS17250 3055f06c3e83c70e07935894ba19b836 412 PIRSF PIRSF016055 1 412 3.6E-200 T 06-07-2017 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM402_RS00300 e2e649a95e81ca4b32047b5bafac4e0c 186 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 182 1.7E-70 T 06-07-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM402_RS00300 e2e649a95e81ca4b32047b5bafac4e0c 186 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 4 184 1.3E-74 T 06-07-2017 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AM402_RS18255 08a7ac4c507b265c91240cfab3c397e8 70 Pfam PF05154 TM2 domain 2 53 2.5E-20 T 06-07-2017 IPR007829 TM2 domain AM402_RS08045 fc4a6095ce2b3ce27a744ce05c2022c5 278 SUPERFAMILY SSF46689 172 222 3.64E-5 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08045 fc4a6095ce2b3ce27a744ce05c2022c5 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 7.2E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS08045 fc4a6095ce2b3ce27a744ce05c2022c5 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 7.2E-6 T 06-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM402_RS08045 fc4a6095ce2b3ce27a744ce05c2022c5 278 SUPERFAMILY SSF46689 225 273 7.62E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08045 fc4a6095ce2b3ce27a744ce05c2022c5 278 Gene3D G3DSA:1.10.10.60 226 273 3.8E-16 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08045 fc4a6095ce2b3ce27a744ce05c2022c5 278 Gene3D G3DSA:1.10.10.60 169 225 6.6E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS08045 fc4a6095ce2b3ce27a744ce05c2022c5 278 SMART SM00342 189 272 3.3E-29 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS08045 fc4a6095ce2b3ce27a744ce05c2022c5 278 Pfam PF12833 Helix-turn-helix domain 196 272 1.6E-21 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS20480 4c7d7eb0b6e2e05f742c6c237b01d20c 138 SUPERFAMILY SSF143422 6 135 2.35E-46 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS20480 4c7d7eb0b6e2e05f742c6c237b01d20c 138 SMART SM01321 14 134 1.5E-42 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS20480 4c7d7eb0b6e2e05f742c6c237b01d20c 138 Gene3D G3DSA:3.30.70.1290 2 137 4.4E-49 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS20480 4c7d7eb0b6e2e05f742c6c237b01d20c 138 Pfam PF01797 Transposase IS200 like 15 134 1.9E-40 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS06765 4c7d7eb0b6e2e05f742c6c237b01d20c 138 SUPERFAMILY SSF143422 6 135 2.35E-46 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS06765 4c7d7eb0b6e2e05f742c6c237b01d20c 138 SMART SM01321 14 134 1.5E-42 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS06765 4c7d7eb0b6e2e05f742c6c237b01d20c 138 Gene3D G3DSA:3.30.70.1290 2 137 4.4E-49 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS06765 4c7d7eb0b6e2e05f742c6c237b01d20c 138 Pfam PF01797 Transposase IS200 like 15 134 1.9E-40 T 06-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM402_RS19370 fb8d0738caab8a7db007fc75478a2dbf 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 2.7E-39 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS19370 fb8d0738caab8a7db007fc75478a2dbf 195 SMART SM00852 7 153 4.0E-23 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS19370 fb8d0738caab8a7db007fc75478a2dbf 195 SUPERFAMILY SSF53218 4 188 3.4E-46 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS19370 fb8d0738caab8a7db007fc75478a2dbf 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 06-07-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM402_RS19370 fb8d0738caab8a7db007fc75478a2dbf 195 Gene3D G3DSA:3.40.980.10 2 188 3.8E-52 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS19370 fb8d0738caab8a7db007fc75478a2dbf 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 1.9E-28 T 06-07-2017 IPR001453 MoaB/Mog domain AM402_RS17780 2b255b41baf6f2e8a5f97785f80f0512 313 Pfam PF06834 TraU protein 29 301 1.6E-68 T 06-07-2017 IPR009649 TraU AM402_RS17780 2b255b41baf6f2e8a5f97785f80f0512 313 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 24 310 4.4E-120 T 06-07-2017 IPR026331 Integrating conjugative element protein PFL_4710 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 5.8E-129 T 06-07-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 Pfam PF04545 Sigma-70, region 4 228 279 3.4E-16 T 06-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 SUPERFAMILY SSF88659 198 283 4.86E-19 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 Gene3D G3DSA:1.10.601.10 15 122 8.4E-35 T 06-07-2017 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 Gene3D G3DSA:1.10.10.10 224 280 3.0E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 SUPERFAMILY SSF88946 12 122 4.97E-40 T 06-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 Pfam PF00140 Sigma-70 factor, region 1.2 15 41 2.0E-7 T 06-07-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.4E-19 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.4E-19 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.4E-19 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.4E-19 T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 54.56 T 06-07-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 06-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 Pfam PF04542 Sigma-70 region 2 53 122 1.1E-16 T 06-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 PIRSF PIRSF000770 10 284 3.3E-32 T 06-07-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AM402_RS19970 1300fc697903d97fe32339b65dab81db 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 2.3E-35 T 06-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS02170 b30743e0d0ad403e5fc691267cb41195 375 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 4 367 5.3E-127 T 06-07-2017 IPR017741 FAD-dependent oxidoreductase, HpnW AM402_RS02170 b30743e0d0ad403e5fc691267cb41195 375 Gene3D G3DSA:3.50.50.60 2 72 1.4E-21 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02170 b30743e0d0ad403e5fc691267cb41195 375 Gene3D G3DSA:3.50.50.60 348 367 1.4E-21 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02170 b30743e0d0ad403e5fc691267cb41195 375 Gene3D G3DSA:3.50.50.60 281 292 1.4E-21 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02170 b30743e0d0ad403e5fc691267cb41195 375 Gene3D G3DSA:3.50.50.60 132 213 1.4E-21 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02170 b30743e0d0ad403e5fc691267cb41195 375 SUPERFAMILY SSF51905 2 208 1.08E-29 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS02170 b30743e0d0ad403e5fc691267cb41195 375 Pfam PF01266 FAD dependent oxidoreductase 4 367 3.6E-30 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM402_RS16770 9f76a717fb1fc78c9918c087dad7af93 678 Pfam PF11412 Disulphide bond corrector protein DsbC 40 143 1.2E-18 T 06-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM402_RS16770 9f76a717fb1fc78c9918c087dad7af93 678 ProSitePatterns PS00194 Thioredoxin family active site. 583 601 - T 06-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AM402_RS16770 9f76a717fb1fc78c9918c087dad7af93 678 SUPERFAMILY SSF52833 560 671 2.2E-13 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS16770 9f76a717fb1fc78c9918c087dad7af93 678 Pfam PF13899 Thioredoxin-like 564 650 9.1E-14 T 06-07-2017 AM402_RS16770 9f76a717fb1fc78c9918c087dad7af93 678 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 286 493 1.0E-8 T 06-07-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM402_RS16770 9f76a717fb1fc78c9918c087dad7af93 678 Gene3D G3DSA:3.40.30.10 561 674 2.9E-16 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS03025 40086fb98e2e587bdbb2f953b486c1ee 148 Gene3D G3DSA:3.30.300.20 44 143 7.5E-33 T 06-07-2017 IPR015946 K homology domain-like, alpha/beta AM402_RS03025 40086fb98e2e587bdbb2f953b486c1ee 148 Pfam PF02566 OsmC-like protein 39 142 6.0E-19 T 06-07-2017 IPR003718 OsmC/Ohr family AM402_RS03025 40086fb98e2e587bdbb2f953b486c1ee 148 SUPERFAMILY SSF82784 14 144 3.14E-33 T 06-07-2017 IPR003718 OsmC/Ohr family AM402_RS11470 0e87a64e1992cd388656e669599a05a6 494 Pfam PF04492 Bacteriophage replication protein O 20 113 3.9E-37 T 06-07-2017 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 AM402_RS11470 0e87a64e1992cd388656e669599a05a6 494 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 21 113 4.2E-26 T 06-07-2017 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 AM402_RS03465 be51f4852a79fd6a1c669153f83fff23 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 9.6E-45 T 06-07-2017 IPR009383 Protein of unknown function DUF1040 AM402_RS03465 be51f4852a79fd6a1c669153f83fff23 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-36 T 06-07-2017 IPR009383 Protein of unknown function DUF1040 AM402_RS02190 1cee0e20a1d83daa842eb8ce8c2c9edb 79 Gene3D G3DSA:1.10.3540.10 2 75 2.1E-22 T 06-07-2017 IPR023137 DUF1819 domain AM402_RS02190 1cee0e20a1d83daa842eb8ce8c2c9edb 79 Pfam PF08849 Putative inner membrane protein (DUF1819) 5 75 3.7E-16 T 06-07-2017 IPR014948 Protein of unknown function DUF1819, putative inner membrane AM402_RS02415 d5cfa945f07b376e836718297ac2de1b 543 Pfam PF00884 Sulfatase 230 478 2.3E-36 T 06-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM402_RS02415 d5cfa945f07b376e836718297ac2de1b 543 Gene3D G3DSA:3.40.720.10 231 504 4.3E-14 T 06-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM402_RS02415 d5cfa945f07b376e836718297ac2de1b 543 SUPERFAMILY SSF53649 231 503 2.06E-19 T 06-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM402_RS10955 f4249dc7465d69367a38d42e1389e529 302 SUPERFAMILY SSF161098 100 283 1.11E-24 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10955 f4249dc7465d69367a38d42e1389e529 302 Gene3D G3DSA:1.10.3720.10 102 299 3.8E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10955 f4249dc7465d69367a38d42e1389e529 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 3.8E-28 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10955 f4249dc7465d69367a38d42e1389e529 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 7.4E-14 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM402_RS02600 74f8c769a83c83b3fee3fb87fe87aed9 344 PIRSF PIRSF015268 4 344 1.3E-145 T 06-07-2017 IPR011204 Virulence protein RhuM-like AM402_RS02600 74f8c769a83c83b3fee3fb87fe87aed9 344 Pfam PF13310 Virulence protein RhuM family 69 322 3.7E-112 T 06-07-2017 IPR011204 Virulence protein RhuM-like AM402_RS16805 f7fe45d859faa9f3894090babcaf4891 182 Pfam PF04390 Lipopolysaccharide-assembly 11 157 7.2E-19 T 06-07-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM402_RS16805 f7fe45d859faa9f3894090babcaf4891 182 Gene3D G3DSA:3.30.160.150 19 168 5.7E-56 T 06-07-2017 AM402_RS16805 f7fe45d859faa9f3894090babcaf4891 182 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 162 23.502 T 06-07-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 1.1E-149 T 06-07-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 SUPERFAMILY SSF46785 261 331 2.29E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 SMART SM00382 55 182 7.8E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 1.1E-33 T 06-07-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 Gene3D G3DSA:3.40.50.300 24 179 7.1E-33 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 Gene3D G3DSA:1.10.10.10 261 330 3.1E-35 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 Gene3D G3DSA:1.10.8.60 187 259 1.6E-33 T 06-07-2017 AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 239 5.3E-117 T 06-07-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 329 7.0E-36 T 06-07-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.326 T 06-07-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM402_RS13030 f48caec3468ff052d00867f9b3fac6df 336 SUPERFAMILY SSF52540 24 256 4.61E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS03155 48456549420f46109648f14f4ca2a3ef 244 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 1.4E-72 T 06-07-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM402_RS03155 48456549420f46109648f14f4ca2a3ef 244 PIRSF PIRSF003107 7 226 6.1E-68 T 06-07-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM402_RS03155 48456549420f46109648f14f4ca2a3ef 244 Gene3D G3DSA:1.20.58.220 127 234 6.6E-32 T 06-07-2017 AM402_RS03155 48456549420f46109648f14f4ca2a3ef 244 Gene3D G3DSA:1.20.58.220 9 115 3.0E-36 T 06-07-2017 AM402_RS03155 48456549420f46109648f14f4ca2a3ef 244 Pfam PF01895 PhoU domain 28 111 1.3E-20 T 06-07-2017 IPR026022 PhoU domain AM402_RS03155 48456549420f46109648f14f4ca2a3ef 244 Pfam PF01895 PhoU domain 128 212 1.4E-17 T 06-07-2017 IPR026022 PhoU domain AM402_RS03155 48456549420f46109648f14f4ca2a3ef 244 SUPERFAMILY SSF109755 13 230 2.51E-70 T 06-07-2017 AM402_RS11330 ded05f266695d5005115e1ef0ebfc502 300 SUPERFAMILY SSF53850 88 290 1.21E-33 T 06-07-2017 AM402_RS11330 ded05f266695d5005115e1ef0ebfc502 300 Gene3D G3DSA:3.40.190.10 172 258 4.2E-9 T 06-07-2017 AM402_RS11330 ded05f266695d5005115e1ef0ebfc502 300 Gene3D G3DSA:1.10.10.10 6 87 4.1E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11330 ded05f266695d5005115e1ef0ebfc502 300 Gene3D G3DSA:3.40.190.10 89 171 2.2E-13 T 06-07-2017 AM402_RS11330 ded05f266695d5005115e1ef0ebfc502 300 Pfam PF03466 LysR substrate binding domain 88 290 3.8E-28 T 06-07-2017 IPR005119 LysR, substrate-binding AM402_RS11330 ded05f266695d5005115e1ef0ebfc502 300 SUPERFAMILY SSF46785 6 88 2.54E-20 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11330 ded05f266695d5005115e1ef0ebfc502 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.3E-20 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS08535 bcfd8c1e314973d036a3a2615ee78f7c 391 PIRSF PIRSF004925 7 391 1.5E-109 T 06-07-2017 IPR026032 Probable 3-phenylpropionic acid transporter AM402_RS08535 bcfd8c1e314973d036a3a2615ee78f7c 391 Pfam PF12832 MFS_1 like family 14 359 2.9E-50 T 06-07-2017 IPR024989 Major facilitator superfamily associated domain AM402_RS08535 bcfd8c1e314973d036a3a2615ee78f7c 391 SUPERFAMILY SSF103473 13 382 1.57E-38 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS08535 bcfd8c1e314973d036a3a2615ee78f7c 391 Gene3D G3DSA:1.20.1250.20 11 185 9.7E-13 T 06-07-2017 AM402_RS08535 bcfd8c1e314973d036a3a2615ee78f7c 391 Gene3D G3DSA:1.20.1250.20 202 382 2.1E-21 T 06-07-2017 AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 228 6.7E-17 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 PRINTS PR00969 Pili chaperone signature 99 116 1.3E-23 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 PRINTS PR00969 Pili chaperone signature 130 145 1.3E-23 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 PRINTS PR00969 Pili chaperone signature 25 34 1.3E-23 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 PRINTS PR00969 Pili chaperone signature 166 181 1.3E-23 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 PRINTS PR00969 Pili chaperone signature 70 91 1.3E-23 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 148 2.4E-24 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 Gene3D G3DSA:2.60.40.1070 154 231 5.1E-24 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 SUPERFAMILY SSF49354 21 148 1.96E-28 T 06-07-2017 IPR008962 PapD-like AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 Gene3D G3DSA:2.60.40.360 26 146 5.2E-27 T 06-07-2017 IPR008962 PapD-like AM402_RS04995 8aebefce67d47565f897fa874d00f5d2 238 SUPERFAMILY SSF49584 153 230 3.66E-22 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS20435 e71e740bc53188692b0b9b5dd2fa6d4f 304 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 5 301 35.308 T 06-07-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AM402_RS20435 e71e740bc53188692b0b9b5dd2fa6d4f 304 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 06-07-2017 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AM402_RS20435 e71e740bc53188692b0b9b5dd2fa6d4f 304 SUPERFAMILY SSF53697 13 251 2.43E-65 T 06-07-2017 AM402_RS20435 e71e740bc53188692b0b9b5dd2fa6d4f 304 Pfam PF13580 SIS domain 41 168 2.0E-13 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS20435 e71e740bc53188692b0b9b5dd2fa6d4f 304 Gene3D G3DSA:3.40.50.10490 11 251 3.8E-77 T 06-07-2017 AM402_RS20435 e71e740bc53188692b0b9b5dd2fa6d4f 304 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 12 285 4.3E-100 T 06-07-2017 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 324 343 4.2E-9 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 103 115 4.2E-9 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 101 4.2E-9 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 207 220 4.2E-9 T 06-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 SUPERFAMILY SSF50621 322 453 1.47E-13 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 239 256 - T 06-07-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 63 296 6.6E-23 T 06-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 Gene3D G3DSA:2.40.37.10 323 451 2.7E-12 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 SUPERFAMILY SSF51419 50 262 8.58E-38 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 SUPERFAMILY SSF51419 301 335 8.58E-38 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 Gene3D G3DSA:3.20.20.10 61 262 1.2E-43 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 Gene3D G3DSA:3.20.20.10 294 322 1.2E-43 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS18305 a956dc526a6332aaedadb18ca27f3d0e 467 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 362 447 1.5E-4 T 06-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AM402_RS20305 b862972c1e39f4a4a919db2e7df57dcf 176 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 1.6E-28 T 06-07-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM402_RS20305 b862972c1e39f4a4a919db2e7df57dcf 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.7E-31 T 06-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM402_RS20305 b862972c1e39f4a4a919db2e7df57dcf 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.7E-31 T 06-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM402_RS20305 b862972c1e39f4a4a919db2e7df57dcf 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.7E-31 T 06-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM402_RS20305 b862972c1e39f4a4a919db2e7df57dcf 176 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 169 18.28 T 06-07-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 Hamap MF_01201 Alanine racemase. 40 406 24.932 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 Pfam PF00842 Alanine racemase, C-terminal domain 278 394 3.4E-29 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 PRINTS PR00992 Alanine racemase signature 311 326 3.9E-21 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 PRINTS PR00992 Alanine racemase signature 332 349 3.9E-21 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 PRINTS PR00992 Alanine racemase signature 66 82 3.9E-21 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 PRINTS PR00992 Alanine racemase signature 200 211 3.9E-21 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 PRINTS PR00992 Alanine racemase signature 243 270 3.9E-21 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 Gene3D G3DSA:3.20.20.10 50 259 2.9E-47 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 71 81 - T 06-07-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 SUPERFAMILY SSF51419 47 277 1.05E-43 T 06-07-2017 IPR029066 PLP-binding barrel AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 Gene3D G3DSA:2.40.37.10 260 406 6.4E-44 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 SUPERFAMILY SSF50621 273 406 7.32E-41 T 06-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 Pfam PF01168 Alanine racemase, N-terminal domain 47 269 1.4E-46 T 06-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 SMART SM01005 278 406 4.1E-48 T 06-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS09045 ad52cba7aaf9a8fcd7b81b4a4dc0246b 407 TIGRFAM TIGR00492 alr: alanine racemase 43 390 2.6E-70 T 06-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM402_RS07795 3ea3ff042543866963cb7b514a10060c 102 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 6 95 5.8E-20 T 06-07-2017 AM402_RS07795 3ea3ff042543866963cb7b514a10060c 102 Gene3D G3DSA:3.10.480.10 5 74 7.7E-8 T 06-07-2017 AM402_RS07795 3ea3ff042543866963cb7b514a10060c 102 SUPERFAMILY SSF88697 5 79 5.59E-11 T 06-07-2017 IPR015947 PUA-like domain AM402_RS07835 a2fa03c7062e79a2f380e0993a74484b 381 Pfam PF05125 Phage major capsid protein, P2 family 8 339 1.1E-141 T 06-07-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM402_RS07835 a2fa03c7062e79a2f380e0993a74484b 381 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 338 1.6E-91 T 06-07-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM402_RS17920 e677d5ce1ee25a93b1fbb2c61691af45 225 SUPERFAMILY SSF46689 20 89 2.46E-12 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS17920 e677d5ce1ee25a93b1fbb2c61691af45 225 Gene3D G3DSA:1.10.357.10 21 206 1.1E-30 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS17920 e677d5ce1ee25a93b1fbb2c61691af45 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 6.6E-8 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS17920 e677d5ce1ee25a93b1fbb2c61691af45 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 6.6E-8 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS17920 e677d5ce1ee25a93b1fbb2c61691af45 225 Pfam PF16925 Bacterial transcriptional repressor C-terminal 99 209 1.6E-35 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS17920 e677d5ce1ee25a93b1fbb2c61691af45 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 69 1.3E-8 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS17920 e677d5ce1ee25a93b1fbb2c61691af45 225 SUPERFAMILY SSF48498 99 206 4.45E-18 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS02860 cff214d09e0ce72a4232497971251223 108 Gene3D G3DSA:3.40.50.270 1 103 4.0E-34 T 06-07-2017 AM402_RS02860 cff214d09e0ce72a4232497971251223 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 2.7E-15 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM402_RS02860 cff214d09e0ce72a4232497971251223 108 SUPERFAMILY SSF52794 4 102 1.15E-31 T 06-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM402_RS04945 3e4d4e5cfcce3142358baf0baa4110c3 168 Pfam PF04186 FxsA cytoplasmic membrane protein 8 111 6.2E-32 T 06-07-2017 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.4E-14 T 06-07-2017 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.417 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 06-07-2017 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 SUPERFAMILY SSF52540 1 213 2.17E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 Pfam PF00406 Adenylate kinase 5 186 1.8E-59 T 06-07-2017 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.3E-35 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.3E-35 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.3E-35 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.3E-35 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.3E-35 T 06-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 8.5E-76 T 06-07-2017 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 AM402_RS06740 ec5d4bdf9e7104a325c7b5b643eca45a 214 Gene3D G3DSA:3.40.50.300 1 212 4.8E-82 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13625 36baf66da35245725670371a28446766 220 PIRSF PIRSF011491 1 220 4.1E-84 T 06-07-2017 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted AM402_RS13625 36baf66da35245725670371a28446766 220 Gene3D G3DSA:3.40.50.150 36 157 4.7E-12 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS13625 36baf66da35245725670371a28446766 220 Pfam PF08241 Methyltransferase domain 55 153 4.6E-8 T 06-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM402_RS13625 36baf66da35245725670371a28446766 220 SUPERFAMILY SSF53335 22 200 1.11E-15 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS18495 510d212d657855109ab4ebaabca118a3 283 SUPERFAMILY SSF52374 1 280 8.04E-103 T 06-07-2017 AM402_RS18495 510d212d657855109ab4ebaabca118a3 283 Gene3D G3DSA:3.30.1300.10 181 281 7.0E-28 T 06-07-2017 AM402_RS18495 510d212d657855109ab4ebaabca118a3 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 5.5E-109 T 06-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM402_RS18495 510d212d657855109ab4ebaabca118a3 283 Gene3D G3DSA:3.40.50.620 1 176 9.9E-76 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS18495 510d212d657855109ab4ebaabca118a3 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 38.24 T 06-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM402_RS18495 510d212d657855109ab4ebaabca118a3 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 2.0E-101 T 06-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM402_RS18495 510d212d657855109ab4ebaabca118a3 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 86 6.7E-9 T 06-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM402_RS04935 f3db620978e46becc7d44ad6c179c9cf 441 PIRSF PIRSF004539 1 441 8.1E-172 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM402_RS04935 f3db620978e46becc7d44ad6c179c9cf 441 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.4E-140 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM402_RS04935 f3db620978e46becc7d44ad6c179c9cf 441 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 441 7.0E-190 T 06-07-2017 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AM402_RS07105 363e1be5a062de567aa27d86e5673ab1 426 SUPERFAMILY SSF51569 4 424 3.17E-171 T 06-07-2017 AM402_RS07105 363e1be5a062de567aa27d86e5673ab1 426 Gene3D G3DSA:3.20.20.70 5 293 2.1E-140 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS07105 363e1be5a062de567aa27d86e5673ab1 426 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 5.2E-201 T 06-07-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM402_RS07105 363e1be5a062de567aa27d86e5673ab1 426 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 2.3E-201 T 06-07-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM402_RS07105 363e1be5a062de567aa27d86e5673ab1 426 Gene3D G3DSA:1.10.400.20 294 409 1.4E-49 T 06-07-2017 AM402_RS07105 363e1be5a062de567aa27d86e5673ab1 426 PIRSF PIRSF009264 1 426 5.9E-199 T 06-07-2017 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AM402_RS21070 bc6bfd0f52902b3bbead612292a0ee34 191 Gene3D G3DSA:3.40.50.150 75 154 1.2E-7 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS21070 bc6bfd0f52902b3bbead612292a0ee34 191 SUPERFAMILY SSF53335 49 148 4.32E-14 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS21070 bc6bfd0f52902b3bbead612292a0ee34 191 Pfam PF02384 N-6 DNA Methylase 52 147 7.3E-5 T 06-07-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM402_RS01930 7e087056a61e0521d58fff91cc1ae003 437 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 6.4E-32 T 06-07-2017 IPR017508 HipA, N-terminal subdomain 1 AM402_RS01930 7e087056a61e0521d58fff91cc1ae003 437 Pfam PF07805 HipA-like N-terminal domain 151 239 4.4E-20 T 06-07-2017 IPR012894 HipA, N-terminal subdomain 2 AM402_RS01930 7e087056a61e0521d58fff91cc1ae003 437 Pfam PF13657 HipA N-terminal domain 4 103 3.2E-24 T 06-07-2017 IPR017508 HipA, N-terminal subdomain 1 AM402_RS01930 7e087056a61e0521d58fff91cc1ae003 437 Pfam PF07804 HipA-like C-terminal domain 250 404 7.2E-29 T 06-07-2017 IPR012893 HipA-like, C-terminal AM402_RS18675 a9acb6a5882cde5625ddd3541dc4f36e 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM402_RS18675 a9acb6a5882cde5625ddd3541dc4f36e 211 SUPERFAMILY SSF46689 14 77 3.29E-10 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS18675 a9acb6a5882cde5625ddd3541dc4f36e 211 Gene3D G3DSA:1.10.357.10 50 126 4.9E-9 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS18675 a9acb6a5882cde5625ddd3541dc4f36e 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 1.5E-8 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS18675 a9acb6a5882cde5625ddd3541dc4f36e 211 Gene3D G3DSA:1.10.10.60 11 49 1.3E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS11270 cebf5caf5c0195cc848c7bbbb5873247 305 Gene3D G3DSA:3.10.350.10 49 85 3.8E-4 T 06-07-2017 IPR018392 LysM domain AM402_RS11270 cebf5caf5c0195cc848c7bbbb5873247 305 SUPERFAMILY SSF141523 97 232 3.53E-28 T 06-07-2017 AM402_RS11270 cebf5caf5c0195cc848c7bbbb5873247 305 Gene3D G3DSA:2.40.440.10 89 234 6.4E-34 T 06-07-2017 AM402_RS11270 cebf5caf5c0195cc848c7bbbb5873247 305 Pfam PF03734 L,D-transpeptidase catalytic domain 96 232 2.8E-18 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM402_RS09170 a81c7d84d0950446bb1bc9eef6c0c0d4 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 498 2.5E-165 T 06-07-2017 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09170 a81c7d84d0950446bb1bc9eef6c0c0d4 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 391 417 1.4E-35 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09170 a81c7d84d0950446bb1bc9eef6c0c0d4 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 1.4E-35 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09170 a81c7d84d0950446bb1bc9eef6c0c0d4 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.4E-35 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09170 a81c7d84d0950446bb1bc9eef6c0c0d4 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.4E-35 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09170 a81c7d84d0950446bb1bc9eef6c0c0d4 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 339 358 1.4E-35 T 06-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09170 a81c7d84d0950446bb1bc9eef6c0c0d4 509 Pfam PF00361 Proton-conducting membrane transporter 133 431 1.4E-66 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS06040 618bd8224b431d688fdea277b15ddf80 233 SMART SM00382 24 207 1.5E-17 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS06040 618bd8224b431d688fdea277b15ddf80 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS06040 618bd8224b431d688fdea277b15ddf80 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 211 5.4E-99 T 06-07-2017 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 AM402_RS06040 618bd8224b431d688fdea277b15ddf80 233 Pfam PF00005 ABC transporter 18 157 5.4E-35 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS06040 618bd8224b431d688fdea277b15ddf80 233 Gene3D G3DSA:3.40.50.300 1 221 2.6E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06040 618bd8224b431d688fdea277b15ddf80 233 SUPERFAMILY SSF52540 1 220 7.32E-66 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09005 19f22ca62d7c7b9696095fb927146f13 193 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 6.4E-71 T 06-07-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM402_RS09005 19f22ca62d7c7b9696095fb927146f13 193 Gene3D G3DSA:3.40.50.1950 2 190 4.5E-76 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM402_RS09005 19f22ca62d7c7b9696095fb927146f13 193 SUPERFAMILY SSF52507 2 187 8.63E-59 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM402_RS09005 19f22ca62d7c7b9696095fb927146f13 193 Pfam PF02441 Flavoprotein 2 127 3.3E-24 T 06-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM402_RS09005 19f22ca62d7c7b9696095fb927146f13 193 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.837 T 06-07-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM402_RS05635 ca0c981f88d80cc6ab477a9e87b3654a 445 SUPERFAMILY SSF103473 18 438 6.02E-62 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS05635 ca0c981f88d80cc6ab477a9e87b3654a 445 Pfam PF07690 Major Facilitator Superfamily 37 392 4.1E-38 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS05635 ca0c981f88d80cc6ab477a9e87b3654a 445 PIRSF PIRSF002808 8 445 1.3E-101 T 06-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM402_RS05635 ca0c981f88d80cc6ab477a9e87b3654a 445 Gene3D G3DSA:1.20.1250.20 24 221 1.9E-41 T 06-07-2017 AM402_RS05635 ca0c981f88d80cc6ab477a9e87b3654a 445 Gene3D G3DSA:1.20.1250.20 244 438 3.0E-24 T 06-07-2017 AM402_RS06005 ae7fa1159481a5527a6fcd4bdc92eebc 333 Gene3D G3DSA:3.40.718.10 3 330 5.6E-137 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS06005 ae7fa1159481a5527a6fcd4bdc92eebc 333 SUPERFAMILY SSF53659 6 330 7.36E-115 T 06-07-2017 AM402_RS06005 ae7fa1159481a5527a6fcd4bdc92eebc 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 37 324 3.6E-111 T 06-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM402_RS06005 ae7fa1159481a5527a6fcd4bdc92eebc 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 328 35.828 T 06-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM402_RS06005 ae7fa1159481a5527a6fcd4bdc92eebc 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 6.4E-131 T 06-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM402_RS01325 c5dda80190a6adecd5014fdb73aa1e05 231 Pfam PF00534 Glycosyl transferases group 1 53 209 1.0E-29 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS01325 c5dda80190a6adecd5014fdb73aa1e05 231 Gene3D G3DSA:3.40.50.2000 51 198 1.5E-13 T 06-07-2017 AM402_RS01325 c5dda80190a6adecd5014fdb73aa1e05 231 SUPERFAMILY SSF53756 6 228 3.77E-42 T 06-07-2017 AM402_RS17295 81669443fff6df908661a3bb8c109138 305 SMART SM00849 53 238 1.1E-19 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS17295 81669443fff6df908661a3bb8c109138 305 Gene3D G3DSA:3.60.15.10 42 264 8.2E-35 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS17295 81669443fff6df908661a3bb8c109138 305 SUPERFAMILY SSF56281 37 260 1.02E-39 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS17295 81669443fff6df908661a3bb8c109138 305 Pfam PF00753 Metallo-beta-lactamase superfamily 52 238 1.8E-8 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS03040 a7663390ff67e54e75acd89645e72f61 78 SUPERFAMILY SSF50037 5 71 2.29E-15 T 06-07-2017 IPR008988 Transcriptional repressor, C-terminal AM402_RS03040 a7663390ff67e54e75acd89645e72f61 78 SMART SM00899 1 72 2.6E-8 T 06-07-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM402_RS03040 a7663390ff67e54e75acd89645e72f61 78 Pfam PF04023 FeoA domain 20 68 6.9E-6 T 06-07-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM402_RS18220 2a227f095ebde6222e090921434ad593 224 Gene3D G3DSA:3.30.240.20 157 215 3.3E-15 T 06-07-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AM402_RS18220 2a227f095ebde6222e090921434ad593 224 Gene3D G3DSA:3.30.240.20 80 154 1.1E-17 T 06-07-2017 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AM402_RS18220 2a227f095ebde6222e090921434ad593 224 Pfam PF04239 Protein of unknown function (DUF421) 91 191 1.2E-25 T 06-07-2017 IPR007353 Protein of unknown function DUF421 AM402_RS20605 381edbeee134f6c0e2ceef4faa4e262b 83 Pfam PF07338 Protein of unknown function (DUF1471) 36 83 1.6E-8 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 AM402_RS20605 381edbeee134f6c0e2ceef4faa4e262b 83 SUPERFAMILY SSF159871 3 83 3.92E-15 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 AM402_RS20605 381edbeee134f6c0e2ceef4faa4e262b 83 Gene3D G3DSA:3.30.1660.10 18 83 7.4E-12 T 06-07-2017 IPR025543 Dodecin-like AM402_RS01355 93ad1c501074ba2478df22335bd1a49c 365 Pfam PF05954 Phage late control gene D protein (GPD) 47 345 7.3E-31 T 06-07-2017 AM402_RS01355 93ad1c501074ba2478df22335bd1a49c 365 SUPERFAMILY SSF69279 12 185 1.59E-26 T 06-07-2017 AM402_RS08935 4002af610a9c9bdd9831410a94769281 182 SUPERFAMILY SSF55729 12 151 2.13E-23 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS08935 4002af610a9c9bdd9831410a94769281 182 Pfam PF00583 Acetyltransferase (GNAT) family 72 146 6.7E-13 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS08935 4002af610a9c9bdd9831410a94769281 182 Gene3D G3DSA:3.40.630.30 12 148 4.8E-22 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS18650 b27a08c073549b340db3d77d4ef612a4 120 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 30 114 1.2E-7 T 06-07-2017 IPR019114 Chaperone lipoprotein, PulS/OutS-like AM402_RS18650 b27a08c073549b340db3d77d4ef612a4 120 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 8 120 4.0E-26 T 06-07-2017 AM402_RS21760 850d4be3a5dfabec22df2eeda09d364b 346 SUPERFAMILY SSF57997 91 335 1.31E-12 T 06-07-2017 AM402_RS21760 850d4be3a5dfabec22df2eeda09d364b 346 Pfam PF11740 Plasmid replication region DNA-binding N-term 9 128 1.1E-20 T 06-07-2017 IPR021104 KfrA, N-terminal DNA-binding domain AM402_RS21760 850d4be3a5dfabec22df2eeda09d364b 346 Pfam PF10473 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 220 336 6.8E-10 T 06-07-2017 IPR019513 Centromere protein Cenp-F, leucine-rich repeat-containing domain GO:0008134|GO:0042803|GO:0045502 Reactome: R-HSA-156711|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-5663220|Reactome: R-HSA-68877 AM402_RS00810 857c05bd3526407d287689201e35f1ec 187 Gene3D G3DSA:2.160.10.10 5 177 1.4E-46 T 06-07-2017 AM402_RS00810 857c05bd3526407d287689201e35f1ec 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 98 131 1.1E-7 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS00810 857c05bd3526407d287689201e35f1ec 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 48 0.0022 T 06-07-2017 IPR001451 Hexapeptide repeat AM402_RS00810 857c05bd3526407d287689201e35f1ec 187 SUPERFAMILY SSF51161 6 176 5.96E-45 T 06-07-2017 IPR011004 Trimeric LpxA-like AM402_RS02910 c130951931df954ee3e842af374e6346 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 3.6E-36 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02910 c130951931df954ee3e842af374e6346 308 Gene3D G3DSA:1.10.3720.10 92 304 1.2E-20 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS02910 c130951931df954ee3e842af374e6346 308 SUPERFAMILY SSF161098 94 290 1.02E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18670 ef4e1c6256d9f6709cf30bbfb578613c 210 Pfam PF13309 HTH domain 148 209 7.8E-16 T 06-07-2017 AM402_RS18670 ef4e1c6256d9f6709cf30bbfb578613c 210 Pfam PF08348 YheO-like PAS domain 13 121 1.5E-33 T 06-07-2017 IPR013559 YheO-like AM402_RS18670 ef4e1c6256d9f6709cf30bbfb578613c 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 131 8.0E-42 T 06-07-2017 IPR013559 YheO-like AM402_RS07210 7ec7981e5c7f6bb2ce33bf5ff753d3cf 184 Pfam PF01292 Prokaryotic cytochrome b561 9 179 3.9E-28 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM402_RS07210 7ec7981e5c7f6bb2ce33bf5ff753d3cf 184 SUPERFAMILY SSF81342 4 180 8.63E-36 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM402_RS07210 7ec7981e5c7f6bb2ce33bf5ff753d3cf 184 Gene3D G3DSA:1.20.950.20 90 172 5.6E-5 T 06-07-2017 AM402_RS03910 8eb47fb7ca4a3e88349aeea6c789f992 449 Pfam PF03313 Serine dehydratase alpha chain 196 429 3.3E-43 T 06-07-2017 IPR005130 Serine dehydratase-like, alpha subunit AM402_RS03910 8eb47fb7ca4a3e88349aeea6c789f992 449 PIRSF PIRSF006054 5 436 3.1E-153 T 06-07-2017 IPR021144 Uncharacterised protein family UPF0597 AM402_RS03910 8eb47fb7ca4a3e88349aeea6c789f992 449 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 434 33.856 T 06-07-2017 IPR021144 Uncharacterised protein family UPF0597 AM402_RS19660 94614404768a5cbffb05562c0e6cf179 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 06-07-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AM402_RS19660 94614404768a5cbffb05562c0e6cf179 130 SUPERFAMILY SSF54211 5 130 1.25E-48 T 06-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AM402_RS19660 94614404768a5cbffb05562c0e6cf179 130 Gene3D G3DSA:3.30.230.10 4 130 1.6E-50 T 06-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM402_RS19660 94614404768a5cbffb05562c0e6cf179 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.61 T 06-07-2017 IPR023035 Ribosomal protein S9, bacterial/plastid AM402_RS19660 94614404768a5cbffb05562c0e6cf179 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.4E-47 T 06-07-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AM402_RS16795 af6f1cfa917b16538037c0b0848df22e 241 SUPERFAMILY SSF52540 1 235 1.05E-77 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16795 af6f1cfa917b16538037c0b0848df22e 241 Pfam PF00005 ABC transporter 17 165 1.2E-33 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS16795 af6f1cfa917b16538037c0b0848df22e 241 Gene3D G3DSA:3.40.50.300 1 236 3.1E-81 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS16795 af6f1cfa917b16538037c0b0848df22e 241 SMART SM00382 26 213 5.7E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS16795 af6f1cfa917b16538037c0b0848df22e 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS16795 af6f1cfa917b16538037c0b0848df22e 241 PIRSF PIRSF039085 1 241 1.2E-105 T 06-07-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM402_RS15700 221d6006006bca89f1183483d287daf4 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS15700 221d6006006bca89f1183483d287daf4 383 Gene3D G3DSA:1.20.1090.10 185 383 3.9E-81 T 06-07-2017 AM402_RS15700 221d6006006bca89f1183483d287daf4 383 Gene3D G3DSA:3.40.50.1970 2 184 2.2E-60 T 06-07-2017 AM402_RS15700 221d6006006bca89f1183483d287daf4 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS15700 221d6006006bca89f1183483d287daf4 383 SUPERFAMILY SSF56796 5 382 1.05E-135 T 06-07-2017 AM402_RS15700 221d6006006bca89f1183483d287daf4 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 14 375 6.6E-128 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM402_RS04200 5e515369cfe43517befccb682c726b71 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.0E-23 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS04200 5e515369cfe43517befccb682c726b71 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 2.0E-23 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS04200 5e515369cfe43517befccb682c726b71 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 2.0E-23 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS04200 5e515369cfe43517befccb682c726b71 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 2.0E-23 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS04200 5e515369cfe43517befccb682c726b71 257 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 7 241 1.2E-63 T 06-07-2017 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 AM402_RS04200 5e515369cfe43517befccb682c726b71 257 Pfam PF01311 Bacterial export proteins, family 1 14 235 7.0E-45 T 06-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM402_RS01900 cfe05778a76839c5236ff5007cde0d14 47 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 06-07-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01900 cfe05778a76839c5236ff5007cde0d14 47 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 06-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01900 cfe05778a76839c5236ff5007cde0d14 47 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.1E-27 T 06-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01900 cfe05778a76839c5236ff5007cde0d14 47 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.111 T 06-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS01900 cfe05778a76839c5236ff5007cde0d14 47 Pfam PF00468 Ribosomal protein L34 1 44 1.5E-24 T 06-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS07370 c5726cfdc9d84e598605e3ae6ac6447c 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 355 6.5E-167 T 06-07-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM402_RS07370 c5726cfdc9d84e598605e3ae6ac6447c 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 06-07-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM402_RS07370 c5726cfdc9d84e598605e3ae6ac6447c 363 SMART SM01329 6 355 1.0E-202 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS07370 c5726cfdc9d84e598605e3ae6ac6447c 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 50.812 T 06-07-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM402_RS07370 c5726cfdc9d84e598605e3ae6ac6447c 363 Gene3D G3DSA:3.40.718.10 2 358 3.8E-132 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS07370 c5726cfdc9d84e598605e3ae6ac6447c 363 SUPERFAMILY SSF53659 2 360 6.48E-125 T 06-07-2017 AM402_RS07370 c5726cfdc9d84e598605e3ae6ac6447c 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.5E-136 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS03065 c40a14c354c321f344026eff177c2973 452 PIRSF PIRSF005353 4 443 1.9E-174 T 06-07-2017 IPR026033 Purine permease PbuG-like AM402_RS03065 c40a14c354c321f344026eff177c2973 452 Pfam PF00860 Permease family 30 403 5.0E-45 T 06-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS10410 b6c7b05c40dd4a024f009396a77c5ded 554 Pfam PF12236 Bacteriophage head to tail connecting protein 15 499 2.0E-159 T 06-07-2017 IPR020991 Head-to-tail joining protein, podovirus-type AM402_RS04320 9948d38389504075191ea33648a39015 203 SUPERFAMILY SSF81296 32 202 1.16E-60 T 06-07-2017 IPR014756 Immunoglobulin E-set AM402_RS04320 9948d38389504075191ea33648a39015 203 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 32 198 1.6E-39 T 06-07-2017 IPR004302 Chitin-binding protein, N-terminal AM402_RS04320 9948d38389504075191ea33648a39015 203 Gene3D G3DSA:2.70.50.50 32 202 5.7E-65 T 06-07-2017 AM402_RS18945 687b5338c691b8b6ee2ce00a5469b636 205 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 184 7.1E-58 T 06-07-2017 IPR006287 Protein deglycase DJ-1 GO:0006517|GO:0030091 AM402_RS18945 687b5338c691b8b6ee2ce00a5469b636 205 Gene3D G3DSA:3.40.50.880 1 198 3.0E-54 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS18945 687b5338c691b8b6ee2ce00a5469b636 205 Pfam PF01965 DJ-1/PfpI family 4 171 1.8E-41 T 06-07-2017 IPR002818 DJ-1/PfpI AM402_RS18945 687b5338c691b8b6ee2ce00a5469b636 205 SUPERFAMILY SSF52317 5 190 5.11E-45 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS09700 96817f7875c5c01db2851e269e1e820e 134 Pfam PF00460 Flagella basal body rod protein 7 37 3.7E-8 T 06-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM402_RS09700 96817f7875c5c01db2851e269e1e820e 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 130 1.5E-12 T 06-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM402_RS09700 96817f7875c5c01db2851e269e1e820e 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 2.6E-51 T 06-07-2017 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AM402_RS09700 96817f7875c5c01db2851e269e1e820e 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 06-07-2017 IPR019776 Flagellar basal body rod protein, conserved site AM402_RS05765 a53b454a3dbfd01ac13f0a1c76d0b5e2 226 Pfam PF12710 haloacid dehalogenase-like hydrolase 17 195 9.5E-22 T 06-07-2017 AM402_RS05765 a53b454a3dbfd01ac13f0a1c76d0b5e2 226 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 16 204 4.1E-31 T 06-07-2017 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial AM402_RS05765 a53b454a3dbfd01ac13f0a1c76d0b5e2 226 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 15 197 2.3E-25 T 06-07-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AM402_RS05765 a53b454a3dbfd01ac13f0a1c76d0b5e2 226 SUPERFAMILY SSF56784 15 204 2.23E-17 T 06-07-2017 IPR023214 HAD-like domain AM402_RS05765 a53b454a3dbfd01ac13f0a1c76d0b5e2 226 Gene3D G3DSA:3.40.50.1000 84 202 2.5E-21 T 06-07-2017 IPR023214 HAD-like domain AM402_RS04250 d83c9f5d719e260476411cdb6c96398d 332 Pfam PF01032 FecCD transport family 14 327 7.3E-90 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM402_RS04250 d83c9f5d719e260476411cdb6c96398d 332 SUPERFAMILY SSF81345 6 327 5.23E-80 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS04250 d83c9f5d719e260476411cdb6c96398d 332 Gene3D G3DSA:1.10.3470.10 4 330 1.9E-107 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS13790 9e312318550c9a56e6d84b6df3d8f6a4 92 Pfam PF13227 Protein of unknown function (DUF4035) 27 81 1.2E-26 T 06-07-2017 IPR025116 Protein of unknown function DUF4035 AM402_RS17375 03b0f9824effb42602f8ee7a0317a1cc 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 1.3E-42 T 06-07-2017 IPR007416 Protein of unknown function DUF469 AM402_RS13270 b7c34b9a5e49925010742c16ed42d92e 278 PIRSF PIRSF001332 27 278 5.3E-91 T 06-07-2017 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM402_RS13270 b7c34b9a5e49925010742c16ed42d92e 278 Pfam PF03306 Alpha-acetolactate decarboxylase 48 264 1.4E-82 T 06-07-2017 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM402_RS13270 b7c34b9a5e49925010742c16ed42d92e 278 Gene3D G3DSA:3.30.1330.80 124 244 6.7E-46 T 06-07-2017 AM402_RS13270 b7c34b9a5e49925010742c16ed42d92e 278 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 47 277 2.2E-90 T 06-07-2017 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 AM402_RS13270 b7c34b9a5e49925010742c16ed42d92e 278 SUPERFAMILY SSF117856 47 277 2.67E-81 T 06-07-2017 AM402_RS10910 78ce35f82e39be199b3d3ae745b22ef0 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 271 1.8E-29 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10910 78ce35f82e39be199b3d3ae745b22ef0 276 SUPERFAMILY SSF161098 70 256 3.27E-25 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10910 78ce35f82e39be199b3d3ae745b22ef0 276 Gene3D G3DSA:1.10.3720.10 69 269 4.1E-27 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10910 78ce35f82e39be199b3d3ae745b22ef0 276 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 52 3.2E-10 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM402_RS14975 07881a053ac60ed7c63430ea12646839 176 SUPERFAMILY SSF55729 36 169 2.45E-23 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS14975 07881a053ac60ed7c63430ea12646839 176 Gene3D G3DSA:3.40.630.30 15 169 1.6E-29 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS14975 07881a053ac60ed7c63430ea12646839 176 Pfam PF13673 Acetyltransferase (GNAT) domain 51 153 7.7E-13 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS06155 96eb615e4f3cee4df08152f5dc52dac4 147 SUPERFAMILY SSF82649 5 142 2.02E-43 T 06-07-2017 AM402_RS06155 96eb615e4f3cee4df08152f5dc52dac4 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 5 140 9.6E-60 T 06-07-2017 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AM402_RS06155 96eb615e4f3cee4df08152f5dc52dac4 147 Gene3D G3DSA:3.90.1010.10 4 143 4.6E-49 T 06-07-2017 AM402_RS06155 96eb615e4f3cee4df08152f5dc52dac4 147 Pfam PF02657 Fe-S metabolism associated domain 20 139 1.1E-41 T 06-07-2017 IPR003808 Fe-S metabolism associated domain, SufE-like AM402_RS10715 4291a4ed68630a35863602ea703807f8 126 Pfam PF03713 Domain of unknown function (DUF305) 30 116 1.7E-20 T 06-07-2017 IPR005183 Domain of unknown function DUF305 AM402_RS10715 4291a4ed68630a35863602ea703807f8 126 Gene3D G3DSA:1.20.1260.10 31 118 4.6E-26 T 06-07-2017 IPR012347 Ferritin-related AM402_RS16140 f81d6d7bef50659ba4dd1c9b13408342 94 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 3 94 2.2E-30 T 06-07-2017 IPR011846 Cyd operon protein YbgE AM402_RS16140 f81d6d7bef50659ba4dd1c9b13408342 94 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 14 92 3.5E-28 T 06-07-2017 IPR011846 Cyd operon protein YbgE AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 Pfam PF07238 PilZ domain 550 646 3.3E-10 T 06-07-2017 IPR009875 PilZ domain GO:0035438 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 PRINTS PR01439 Cellulose synthase subunit A signature 447 466 1.6E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 PRINTS PR01439 Cellulose synthase subunit A signature 378 404 1.6E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 PRINTS PR01439 Cellulose synthase subunit A signature 81 106 1.6E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 PRINTS PR01439 Cellulose synthase subunit A signature 217 241 1.6E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 PRINTS PR01439 Cellulose synthase subunit A signature 53 73 1.6E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 PRINTS PR01439 Cellulose synthase subunit A signature 136 155 1.6E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 PRINTS PR01439 Cellulose synthase subunit A signature 523 544 1.6E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 PRINTS PR01439 Cellulose synthase subunit A signature 407 426 1.6E-56 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 2 672 2.8E-267 T 06-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 Pfam PF00535 Glycosyl transferase family 2 130 301 3.9E-37 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 Gene3D G3DSA:3.90.550.10 127 364 6.8E-26 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 SUPERFAMILY SSF53448 129 408 2.56E-51 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 Gene3D G3DSA:2.40.10.220 552 645 1.1E-6 T 06-07-2017 AM402_RS02065 fe226344fa0934842d1e0bc2717d41a1 704 SUPERFAMILY SSF141371 552 645 2.59E-7 T 06-07-2017 AM402_RS10220 46a039ca84e081776a0c7cbe7411536c 124 PIRSF PIRSF016789 2 122 6.6E-47 T 06-07-2017 IPR007401 Protein of unknown function DUF454 AM402_RS10220 46a039ca84e081776a0c7cbe7411536c 124 Pfam PF04304 Protein of unknown function (DUF454) 3 116 7.9E-40 T 06-07-2017 IPR007401 Protein of unknown function DUF454 AM402_RS15920 9059ab5719d39857f5fa6d837c962677 81 SUPERFAMILY SSF54285 1 81 6.35E-23 T 06-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM402_RS15920 9059ab5719d39857f5fa6d837c962677 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.3E-22 T 06-07-2017 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 AM402_RS15920 9059ab5719d39857f5fa6d837c962677 81 Pfam PF02597 ThiS family 4 81 1.7E-19 T 06-07-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM402_RS15920 9059ab5719d39857f5fa6d837c962677 81 Gene3D G3DSA:3.10.20.30 1 81 6.3E-25 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS14145 785a8c02fe5e5beefde053bfef5b65d1 64 Gene3D G3DSA:1.10.10.10 1 56 1.3E-5 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 SUPERFAMILY SSF54373 182 285 5.49E-23 T 06-07-2017 AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.4E-8 T 06-07-2017 AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 2.4E-8 T 06-07-2017 AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.4E-8 T 06-07-2017 AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 SUPERFAMILY SSF51905 5 185 3.01E-44 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 SUPERFAMILY SSF51905 285 389 3.01E-44 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 Gene3D G3DSA:3.30.9.10 171 345 1.1E-12 T 06-07-2017 AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 Gene3D G3DSA:3.50.50.60 2 170 8.4E-31 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS04375 83b01de468bf0964f71a00367549d00f 430 Pfam PF12831 FAD dependent oxidoreductase 9 161 4.6E-12 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS11810 7b9e20b9063b1efb855b5a29996baf92 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.2E-15 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS11810 7b9e20b9063b1efb855b5a29996baf92 333 SMART SM00382 32 243 3.6E-5 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS11810 7b9e20b9063b1efb855b5a29996baf92 333 SUPERFAMILY SSF52540 3 268 1.85E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11810 7b9e20b9063b1efb855b5a29996baf92 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 6.2E-20 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS11810 7b9e20b9063b1efb855b5a29996baf92 333 Gene3D G3DSA:3.40.50.300 2 262 1.2E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11810 7b9e20b9063b1efb855b5a29996baf92 333 Pfam PF00005 ABC transporter 24 187 9.5E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS10810 1cafa24052369bf32426c47ade28757c 213 Gene3D G3DSA:3.40.50.850 2 210 4.2E-64 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS10810 1cafa24052369bf32426c47ade28757c 213 Pfam PF00857 Isochorismatase family 4 205 2.6E-34 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS10810 1cafa24052369bf32426c47ade28757c 213 SUPERFAMILY SSF52499 2 209 3.79E-51 T 06-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM402_RS02260 69f5fd20b3cb3a3e6c28c3589d66b00a 702 Gene3D G3DSA:3.30.420.10 263 410 1.8E-14 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS02260 69f5fd20b3cb3a3e6c28c3589d66b00a 702 Pfam PF00665 Integrase core domain 265 405 2.7E-17 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS02260 69f5fd20b3cb3a3e6c28c3589d66b00a 702 SUPERFAMILY SSF53098 265 406 1.06E-10 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS00220 83e1c20549b02fcafb574977c1f0df90 115 SUPERFAMILY SSF46955 3 67 7.23E-19 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS00220 83e1c20549b02fcafb574977c1f0df90 115 Gene3D G3DSA:1.10.10.10 2 69 4.0E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00220 83e1c20549b02fcafb574977c1f0df90 115 Pfam PF02316 Mu DNA-binding domain 9 112 8.4E-14 T 06-07-2017 IPR003314 Mu-type HTH domain GO:0003677 AM402_RS01115 4dd065fc5a851e204f7b84ef313de961 133 Pfam PF07226 Protein of unknown function (DUF1422) 2 115 2.3E-48 T 06-07-2017 IPR009867 Protein of unknown function DUF1422 AM402_RS01115 4dd065fc5a851e204f7b84ef313de961 133 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 116 4.0E-22 T 06-07-2017 IPR009867 Protein of unknown function DUF1422 AM402_RS07730 6c818d3d6d69d9b5cc974a25a8682144 313 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 19 313 63.126 T 06-07-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM402_RS07730 6c818d3d6d69d9b5cc974a25a8682144 313 Gene3D G3DSA:1.10.443.10 128 303 3.8E-60 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS07730 6c818d3d6d69d9b5cc974a25a8682144 313 SUPERFAMILY SSF56349 23 303 4.41E-60 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS07730 6c818d3d6d69d9b5cc974a25a8682144 313 Gene3D G3DSA:1.10.150.130 22 114 6.2E-28 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS07730 6c818d3d6d69d9b5cc974a25a8682144 313 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 23 105 9.9E-26 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS07730 6c818d3d6d69d9b5cc974a25a8682144 313 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 21 313 58.189 T 06-07-2017 IPR023009 Tyrosine recombinase XerC/XerD AM402_RS07730 6c818d3d6d69d9b5cc974a25a8682144 313 Pfam PF00589 Phage integrase family 128 299 1.3E-53 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS07730 6c818d3d6d69d9b5cc974a25a8682144 313 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 24 312 8.0E-119 T 06-07-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 Pfam PF01225 Mur ligase family, catalytic domain 30 79 1.6E-8 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 Pfam PF08245 Mur ligase middle domain 112 301 1.1E-46 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 35 454 2.2E-139 T 06-07-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 Gene3D G3DSA:3.40.1190.10 88 316 5.8E-72 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 SUPERFAMILY SSF63418 1 101 2.75E-24 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 SUPERFAMILY SSF53244 321 454 2.66E-37 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 402 1.1E-14 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 Gene3D G3DSA:3.40.1390.10 1 86 1.0E-22 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 SUPERFAMILY SSF53623 105 316 6.02E-55 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 455 33.114 T 06-07-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM402_RS07425 135a99e8152547b1859c915fa7da9ff4 460 Gene3D G3DSA:3.90.190.20 321 458 2.7E-41 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07420 7007646fe58f78073affd126c985720c 495 SUPERFAMILY SSF53623 105 337 1.7E-75 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07420 7007646fe58f78073affd126c985720c 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 3.2E-12 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM402_RS07420 7007646fe58f78073affd126c985720c 495 SUPERFAMILY SSF53244 339 491 3.66E-50 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07420 7007646fe58f78073affd126c985720c 495 Gene3D G3DSA:3.40.1390.10 5 104 3.6E-31 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM402_RS07420 7007646fe58f78073affd126c985720c 495 SUPERFAMILY SSF63418 5 103 2.49E-25 T 06-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM402_RS07420 7007646fe58f78073affd126c985720c 495 Gene3D G3DSA:3.90.190.20 343 484 3.9E-57 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07420 7007646fe58f78073affd126c985720c 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 3.6E-164 T 06-07-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM402_RS07420 7007646fe58f78073affd126c985720c 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 9.2E-27 T 06-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM402_RS07420 7007646fe58f78073affd126c985720c 495 Gene3D G3DSA:3.40.1190.10 105 342 7.7E-78 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS07420 7007646fe58f78073affd126c985720c 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.23 T 06-07-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM402_RS07420 7007646fe58f78073affd126c985720c 495 Pfam PF08245 Mur ligase middle domain 114 318 9.2E-50 T 06-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 SMART SM00271 1 66 9.4E-10 T 06-07-2017 IPR001623 DnaJ domain AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 Pfam PF00226 DnaJ domain 2 70 2.3E-9 T 06-07-2017 IPR001623 DnaJ domain AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 SUPERFAMILY SSF46565 1 74 1.1E-19 T 06-07-2017 IPR001623 DnaJ domain AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 2.6E-15 T 06-07-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 Gene3D G3DSA:1.10.287.110 1 78 2.7E-27 T 06-07-2017 IPR001623 DnaJ domain AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 5.1E-49 T 06-07-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 SUPERFAMILY SSF47144 77 171 1.44E-24 T 06-07-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 Gene3D G3DSA:1.20.1280.20 81 171 5.0E-28 T 06-07-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 AM402_RS08580 ab3f55bfa176a72dd71cfd45d0c5fc98 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 24.073 T 06-07-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 AM402_RS03050 bb8c72859478c418f51dcc04a591a7c9 166 Pfam PF04220 Der GTPase activator (YihI) 9 163 2.6E-54 T 06-07-2017 IPR007336 Der GTPase activator AM402_RS03050 bb8c72859478c418f51dcc04a591a7c9 166 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 166 16.523 T 06-07-2017 IPR007336 Der GTPase activator AM402_RS06555 39a1b5e5f11e3cbb6a25fd75a47fba8b 188 Gene3D G3DSA:2.60.40.1090 37 188 3.6E-20 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06555 39a1b5e5f11e3cbb6a25fd75a47fba8b 188 Pfam PF00419 Fimbrial protein 43 187 4.1E-7 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06555 39a1b5e5f11e3cbb6a25fd75a47fba8b 188 SUPERFAMILY SSF49401 39 188 2.54E-27 T 06-07-2017 IPR008966 Adhesion domain AM402_RS13280 ec08c2a591ae212266565c78ab379778 170 Pfam PF09335 SNARE associated Golgi protein 43 161 5.9E-12 T 06-07-2017 IPR032816 SNARE associated Golgi protein AM402_RS10025 c6802d9d90947a6d32f7b0de3e4caee9 265 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 261 9.8E-100 T 06-07-2017 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM402_RS10025 c6802d9d90947a6d32f7b0de3e4caee9 265 SUPERFAMILY SSF53613 4 265 2.18E-79 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS10025 c6802d9d90947a6d32f7b0de3e4caee9 265 Pfam PF08543 Phosphomethylpyrimidine kinase 12 259 1.5E-93 T 06-07-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 AM402_RS10025 c6802d9d90947a6d32f7b0de3e4caee9 265 Gene3D G3DSA:3.40.1190.20 5 262 1.4E-100 T 06-07-2017 IPR029056 Ribokinase-like AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 SMART SM00028 174 207 56.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 SMART SM00028 211 244 0.42 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 SUPERFAMILY SSF48452 146 250 3.31E-14 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 136 254 5.1E-40 T 06-07-2017 IPR014162 Tol-Pal system, YbgF AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 Pfam PF16331 TolA binding protein trimerisation 38 111 9.5E-24 T 06-07-2017 IPR032519 YbgF, trimerisation domain GO:0070206 AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 Gene3D G3DSA:1.25.40.10 139 247 1.6E-14 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 Pfam PF13174 Tetratricopeptide repeat 176 207 2.0E-6 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 Pfam PF13174 Tetratricopeptide repeat 151 170 0.0056 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS16090 2d074a95b510d8e313dc02768f343313 257 Pfam PF13174 Tetratricopeptide repeat 212 244 3.0E-9 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS04045 68dd177f73d4f0c81005f5ca334fc179 382 Gene3D G3DSA:3.40.50.1970 1 168 9.9E-52 T 06-07-2017 AM402_RS04045 68dd177f73d4f0c81005f5ca334fc179 382 Gene3D G3DSA:1.20.1090.10 169 376 6.0E-70 T 06-07-2017 AM402_RS04045 68dd177f73d4f0c81005f5ca334fc179 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 367 4.9E-111 T 06-07-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM402_RS04045 68dd177f73d4f0c81005f5ca334fc179 382 SUPERFAMILY SSF56796 3 378 2.62E-112 T 06-07-2017 AM402_RS04045 68dd177f73d4f0c81005f5ca334fc179 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 244 264 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS04045 68dd177f73d4f0c81005f5ca334fc179 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 157 185 - T 06-07-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM402_RS18045 dee47cad2f44ae817a1409acfb049b6f 461 Pfam PF16966 Porin-like glycoporin RafY 97 461 1.0E-185 T 06-07-2017 IPR016963 Glycoporin RafY AM402_RS18045 dee47cad2f44ae817a1409acfb049b6f 461 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 56 2.8E-15 T 06-07-2017 IPR021570 LamB-type porin N-terminal domain AM402_RS08540 9b0a4a9352409349dd1aa3ea2b8607dc 422 SUPERFAMILY SSF55920 172 406 2.88E-28 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS08540 9b0a4a9352409349dd1aa3ea2b8607dc 422 Pfam PF00557 Metallopeptidase family M24 181 400 1.8E-17 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS08540 9b0a4a9352409349dd1aa3ea2b8607dc 422 Gene3D G3DSA:3.90.230.10 172 392 5.4E-25 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS08540 9b0a4a9352409349dd1aa3ea2b8607dc 422 Gene3D G3DSA:3.40.350.10 8 162 5.6E-4 T 06-07-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM402_RS14250 3eadf4d75264cd0dde22aa81725813ae 150 Pfam PF00293 NUDIX domain 4 115 7.6E-18 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS14250 3eadf4d75264cd0dde22aa81725813ae 150 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.4E-5 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS14250 3eadf4d75264cd0dde22aa81725813ae 150 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.4E-5 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS14250 3eadf4d75264cd0dde22aa81725813ae 150 Gene3D G3DSA:3.90.79.10 3 139 1.3E-29 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS14250 3eadf4d75264cd0dde22aa81725813ae 150 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM402_RS14250 3eadf4d75264cd0dde22aa81725813ae 150 SUPERFAMILY SSF55811 2 132 1.35E-28 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS14515 79572902c1d34f4bf7a03fd0ec51089f 138 Gene3D G3DSA:3.90.79.10 3 130 2.8E-35 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS14515 79572902c1d34f4bf7a03fd0ec51089f 138 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 06-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM402_RS14515 79572902c1d34f4bf7a03fd0ec51089f 138 SUPERFAMILY SSF55811 4 132 3.93E-33 T 06-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM402_RS14515 79572902c1d34f4bf7a03fd0ec51089f 138 Pfam PF00293 NUDIX domain 5 127 1.1E-27 T 06-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AM402_RS14515 79572902c1d34f4bf7a03fd0ec51089f 138 PRINTS PR00502 NUDIX hydrolase family signature 31 45 8.1E-7 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS14515 79572902c1d34f4bf7a03fd0ec51089f 138 PRINTS PR00502 NUDIX hydrolase family signature 45 60 8.1E-7 T 06-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM402_RS15480 8888eefda8a22fbd12249f0e185dd543 349 Gene3D G3DSA:1.10.1530.10 1 71 1.2E-27 T 06-07-2017 AM402_RS15480 8888eefda8a22fbd12249f0e185dd543 349 TIGRFAM TIGR03175 AllD: ureidoglycolate dehydrogenase 1 348 1.8E-187 T 06-07-2017 IPR017590 Ureidoglycolate dehydrogenase KEGG: 00062+1.1.1.35|KEGG: 00071+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00230+1.1.1.350|KEGG: 00280+1.1.1.35|KEGG: 00281+1.1.1.35|KEGG: 00310+1.1.1.35|KEGG: 00362+1.1.1.35|KEGG: 00380+1.1.1.35|KEGG: 00623+1.1.1.35|KEGG: 00650+1.1.1.35|KEGG: 00720+1.1.1.35|KEGG: 00930+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5136|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401 AM402_RS15480 8888eefda8a22fbd12249f0e185dd543 349 SUPERFAMILY SSF89733 1 333 2.09E-112 T 06-07-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS15480 8888eefda8a22fbd12249f0e185dd543 349 Pfam PF02615 Malate/L-lactate dehydrogenase 3 331 9.4E-118 T 06-07-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS15480 8888eefda8a22fbd12249f0e185dd543 349 Gene3D G3DSA:3.30.1370.60 72 271 1.5E-78 T 06-07-2017 AM402_RS19535 6096511022639a1319f70f0ebc96556c 234 Pfam PF02678 Pirin 5 119 8.3E-13 T 06-07-2017 IPR003829 Pirin, N-terminal domain AM402_RS19535 6096511022639a1319f70f0ebc96556c 234 Gene3D G3DSA:2.60.120.10 4 231 3.1E-24 T 06-07-2017 IPR014710 RmlC-like jelly roll fold AM402_RS19535 6096511022639a1319f70f0ebc96556c 234 SUPERFAMILY SSF51182 1 231 3.23E-33 T 06-07-2017 IPR011051 RmlC-like cupin domain AM402_RS05675 4ef593d33d06451ade6d18ee78c28b65 96 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 11 85 4.0E-17 T 06-07-2017 IPR007633 Bacteriophage P2, GpY, holin AM402_RS05675 4ef593d33d06451ade6d18ee78c28b65 96 Pfam PF04550 Phage holin family 2 1 86 4.9E-40 T 06-07-2017 IPR007633 Bacteriophage P2, GpY, holin AM402_RS07540 0381563e44269e71a0742fd2f5064eeb 367 Pfam PF00437 Type II/IV secretion system protein 21 278 5.8E-77 T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM402_RS07540 0381563e44269e71a0742fd2f5064eeb 367 SMART SM00382 140 282 9.9E-5 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS07540 0381563e44269e71a0742fd2f5064eeb 367 SUPERFAMILY SSF52540 9 362 3.1E-79 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS07540 0381563e44269e71a0742fd2f5064eeb 367 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 207 221 - T 06-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM402_RS07540 0381563e44269e71a0742fd2f5064eeb 367 Gene3D G3DSA:3.30.450.90 7 113 4.8E-37 T 06-07-2017 AM402_RS07540 0381563e44269e71a0742fd2f5064eeb 367 Gene3D G3DSA:3.40.50.300 114 366 1.6E-79 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05045 3666aa86599c7df9cbc9de7169ccaef4 482 Pfam PF00361 Proton-conducting membrane transporter 139 418 6.4E-58 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05045 3666aa86599c7df9cbc9de7169ccaef4 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 3.5E-30 T 06-07-2017 AM402_RS05045 3666aa86599c7df9cbc9de7169ccaef4 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 3.5E-30 T 06-07-2017 AM402_RS05045 3666aa86599c7df9cbc9de7169ccaef4 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 3.5E-30 T 06-07-2017 AM402_RS05045 3666aa86599c7df9cbc9de7169ccaef4 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 3.5E-30 T 06-07-2017 AM402_RS05045 3666aa86599c7df9cbc9de7169ccaef4 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 3.5E-30 T 06-07-2017 AM402_RS05045 3666aa86599c7df9cbc9de7169ccaef4 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 158 179 3.5E-30 T 06-07-2017 AM402_RS05045 3666aa86599c7df9cbc9de7169ccaef4 482 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 122 5.5E-8 T 06-07-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS01225 bf8d5ff774068786fc866f8cc8ae6288 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01225 bf8d5ff774068786fc866f8cc8ae6288 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 3.8E-33 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01225 bf8d5ff774068786fc866f8cc8ae6288 70 SUPERFAMILY SSF143800 1 66 2.67E-26 T 06-07-2017 AM402_RS01225 bf8d5ff774068786fc866f8cc8ae6288 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.56 T 06-07-2017 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01225 bf8d5ff774068786fc866f8cc8ae6288 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.4E-21 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01225 bf8d5ff774068786fc866f8cc8ae6288 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.4E-21 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01225 bf8d5ff774068786fc866f8cc8ae6288 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.4E-21 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS01225 bf8d5ff774068786fc866f8cc8ae6288 70 Pfam PF01197 Ribosomal protein L31 1 65 1.8E-29 T 06-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS08185 83e1737e601546def44df7c476ece15d 390 Pfam PF07690 Major Facilitator Superfamily 11 222 1.1E-21 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS08185 83e1737e601546def44df7c476ece15d 390 Gene3D G3DSA:1.20.1250.20 7 186 6.4E-24 T 06-07-2017 AM402_RS08185 83e1737e601546def44df7c476ece15d 390 SUPERFAMILY SSF103473 4 376 3.92E-50 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS08185 83e1737e601546def44df7c476ece15d 390 Gene3D G3DSA:1.20.1250.20 203 372 9.6E-12 T 06-07-2017 AM402_RS05855 3411868f8f1ea88aff73f60f1f36a852 174 SUPERFAMILY SSF53850 3 158 5.64E-8 T 06-07-2017 AM402_RS05855 3411868f8f1ea88aff73f60f1f36a852 174 Gene3D G3DSA:3.40.190.10 85 157 2.6E-4 T 06-07-2017 AM402_RS10160 873e3054d2c2d4efb996af8eaa0a1a4c 118 SUPERFAMILY SSF52833 4 117 4.32E-32 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS10160 873e3054d2c2d4efb996af8eaa0a1a4c 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 116 1.6E-43 T 06-07-2017 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM402_RS10160 873e3054d2c2d4efb996af8eaa0a1a4c 118 Pfam PF03960 ArsC family 8 115 3.5E-18 T 06-07-2017 IPR006660 Arsenate reductase-like AM402_RS10160 873e3054d2c2d4efb996af8eaa0a1a4c 118 Gene3D G3DSA:3.40.30.10 4 117 9.0E-45 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS11090 55c94e41237c1ebb6be7d9a32e8f00ce 364 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 34 340 3.2E-20 T 06-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AM402_RS11090 55c94e41237c1ebb6be7d9a32e8f00ce 364 Gene3D G3DSA:3.40.50.300 1 45 4.8E-5 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11090 55c94e41237c1ebb6be7d9a32e8f00ce 364 SUPERFAMILY SSF52540 23 344 1.03E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11090 55c94e41237c1ebb6be7d9a32e8f00ce 364 Gene3D G3DSA:3.40.50.300 46 345 6.0E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13520 ff74e1992944c9b419d71c68d58e0c98 80 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 2.0E-19 T 06-07-2017 IPR009950 Protein of unknown function DUF1480 AM402_RS13520 ff74e1992944c9b419d71c68d58e0c98 80 Pfam PF07351 Protein of unknown function (DUF1480) 1 79 1.5E-40 T 06-07-2017 IPR009950 Protein of unknown function DUF1480 AM402_RS10620 d8f6573792ad741298c10aaf2fc11ae8 237 Pfam PF09414 RNA ligase 39 205 7.3E-27 T 06-07-2017 IPR021122 RNA ligase domain, REL/Rln2 AM402_RS10620 d8f6573792ad741298c10aaf2fc11ae8 237 SUPERFAMILY SSF56091 11 230 6.62E-32 T 06-07-2017 AM402_RS07865 44b03bc802c461b56ae915844c78a10d 167 Pfam PF03245 Bacteriophage Rz lysis protein 41 150 2.7E-21 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 AM402_RS03090 f929042c0a46e22c5880278471f2d491 106 SUPERFAMILY SSF47336 17 96 5.1E-13 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS03090 f929042c0a46e22c5880278471f2d491 106 Pfam PF00550 Phosphopantetheine attachment site 22 75 6.4E-7 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS03090 f929042c0a46e22c5880278471f2d491 106 Gene3D G3DSA:1.10.1200.10 11 100 1.4E-13 T 06-07-2017 IPR009081 Phosphopantetheine binding ACP domain AM402_RS00900 98391a681a22a421adbf955295852b8c 38 SUPERFAMILY SSF57840 1 38 3.27E-17 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00900 98391a681a22a421adbf955295852b8c 38 Pfam PF00444 Ribosomal protein L36 1 38 1.0E-20 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00900 98391a681a22a421adbf955295852b8c 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.3E-21 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00900 98391a681a22a421adbf955295852b8c 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.753 T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00900 98391a681a22a421adbf955295852b8c 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 06-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00900 98391a681a22a421adbf955295852b8c 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 2.0E-7 T 06-07-2017 AM402_RS08510 5ce420dea633a4aad785b92fc41c0f0d 538 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 5.0E-24 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS08510 5ce420dea633a4aad785b92fc41c0f0d 538 SUPERFAMILY SSF56317 3 241 1.09E-58 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS08510 5ce420dea633a4aad785b92fc41c0f0d 538 Gene3D G3DSA:3.40.50.620 254 518 6.9E-76 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS08510 5ce420dea633a4aad785b92fc41c0f0d 538 Gene3D G3DSA:3.60.110.10 3 241 5.1E-58 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS08510 5ce420dea633a4aad785b92fc41c0f0d 538 SUPERFAMILY SSF52402 257 519 4.19E-77 T 06-07-2017 AM402_RS08510 5ce420dea633a4aad785b92fc41c0f0d 538 Pfam PF02540 NAD synthase 262 510 1.0E-73 T 06-07-2017 IPR022310 NAD/GMP synthase AM402_RS08510 5ce420dea633a4aad785b92fc41c0f0d 538 TIGRFAM TIGR00552 nadE: NAD+ synthetase 267 511 7.7E-61 T 06-07-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AM402_RS06895 0397b18b908ca30894d53d985a737a7a 403 Gene3D G3DSA:1.10.443.10 207 374 1.7E-28 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS06895 0397b18b908ca30894d53d985a737a7a 403 Gene3D G3DSA:1.10.150.130 99 195 2.4E-16 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS06895 0397b18b908ca30894d53d985a737a7a 403 Pfam PF00589 Phage integrase family 208 370 4.1E-26 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS06895 0397b18b908ca30894d53d985a737a7a 403 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 3.9E-19 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 AM402_RS06895 0397b18b908ca30894d53d985a737a7a 403 SUPERFAMILY SSF56349 99 380 4.71E-64 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS12465 4320cbff8f88cdc5ede2f19a1cc3bc42 394 Pfam PF07690 Major Facilitator Superfamily 12 342 2.3E-27 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS12465 4320cbff8f88cdc5ede2f19a1cc3bc42 394 SUPERFAMILY SSF103473 5 384 2.35E-46 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS12465 4320cbff8f88cdc5ede2f19a1cc3bc42 394 Gene3D G3DSA:1.20.1250.20 6 191 9.4E-24 T 06-07-2017 AM402_RS12465 4320cbff8f88cdc5ede2f19a1cc3bc42 394 Gene3D G3DSA:1.20.1250.20 199 390 9.5E-10 T 06-07-2017 AM402_RS07265 44c4148d123dac5a208e9e42c33b9705 357 Gene3D G3DSA:1.10.357.20 181 354 1.0E-53 T 06-07-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM402_RS07265 44c4148d123dac5a208e9e42c33b9705 357 Pfam PF01769 Divalent cation transporter 225 346 1.7E-26 T 06-07-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM402_RS07265 44c4148d123dac5a208e9e42c33b9705 357 SUPERFAMILY SSF54631 40 176 1.02E-20 T 06-07-2017 AM402_RS07265 44c4148d123dac5a208e9e42c33b9705 357 SUPERFAMILY SSF161093 182 351 1.12E-45 T 06-07-2017 AM402_RS07265 44c4148d123dac5a208e9e42c33b9705 357 Gene3D G3DSA:3.10.580.10 36 164 1.5E-13 T 06-07-2017 AM402_RS07265 44c4148d123dac5a208e9e42c33b9705 357 Pfam PF00571 CBS domain 104 158 1.3E-5 T 06-07-2017 IPR000644 CBS domain AM402_RS17180 6f32ff058926c4236bfdfd7b919b8986 133 Pfam PF07417 Transcriptional regulator Crl 6 122 8.7E-51 T 06-07-2017 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AM402_RS17180 6f32ff058926c4236bfdfd7b919b8986 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 31.752 T 06-07-2017 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 AM402_RS00415 339e0f47e97e15aeee6187bc7416c90b 155 SUPERFAMILY SSF52540 26 148 2.0E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS00415 339e0f47e97e15aeee6187bc7416c90b 155 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 141 3.5E-48 T 06-07-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM402_RS00415 339e0f47e97e15aeee6187bc7416c90b 155 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 134 3.8E-39 T 06-07-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM402_RS00415 339e0f47e97e15aeee6187bc7416c90b 155 Gene3D G3DSA:3.40.50.300 3 152 2.9E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05740 bc7b9319bc0e26de6a118a194c58fdba 382 PIRSF PIRSF037118 1 382 1.5E-171 T 06-07-2017 IPR017115 Tellurite resistance, TerA AM402_RS05740 bc7b9319bc0e26de6a118a194c58fdba 382 Pfam PF02342 TerD domain 26 159 1.1E-26 T 06-07-2017 IPR003325 TerD domain GO:0006950 AM402_RS05740 bc7b9319bc0e26de6a118a194c58fdba 382 Gene3D G3DSA:2.60.60.30 26 156 1.8E-22 T 06-07-2017 AM402_RS13895 e9542280897f4d1cbc8ba276d356f97d 132 SUPERFAMILY SSF88659 69 111 6.02E-5 T 06-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM402_RS13895 e9542280897f4d1cbc8ba276d356f97d 132 Pfam PF06530 Phage antitermination protein Q 2 124 1.4E-31 T 06-07-2017 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 AM402_RS19160 d7a7b3094e20703c6e851f3094cf1385 199 Gene3D G3DSA:3.40.109.10 5 199 4.0E-71 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM402_RS19160 d7a7b3094e20703c6e851f3094cf1385 199 SUPERFAMILY SSF55469 4 198 4.84E-73 T 06-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM402_RS19160 d7a7b3094e20703c6e851f3094cf1385 199 Pfam PF00881 Nitroreductase family 9 177 1.1E-17 T 06-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM402_RS02765 41d1151fe876a260df8cfe995218d54e 157 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 154 8.6E-47 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family AM402_RS02765 41d1151fe876a260df8cfe995218d54e 157 SUPERFAMILY SSF51197 1 153 2.69E-44 T 06-07-2017 AM402_RS02765 41d1151fe876a260df8cfe995218d54e 157 Gene3D G3DSA:2.60.120.370 1 153 1.1E-47 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family AM402_RS02765 41d1151fe876a260df8cfe995218d54e 157 Pfam PF04074 Domain of unknown function (DUF386) 1 150 9.3E-42 T 06-07-2017 IPR004375 YhcH/YjgK/YiaL family AM402_RS15265 9446c2eb3f68fa726857d091b576cf11 591 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 589 5.0E-159 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like AM402_RS15265 9446c2eb3f68fa726857d091b576cf11 591 PIRSF PIRSF028304 1 590 2.1E-135 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like AM402_RS15265 9446c2eb3f68fa726857d091b576cf11 591 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 590 1.1E-145 T 06-07-2017 IPR010272 Type VI secretion system, TssF-like AM402_RS15980 c9667d24a0789c86b9e07fc697defe9c 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 1.1E-63 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15980 c9667d24a0789c86b9e07fc697defe9c 273 Gene3D G3DSA:3.30.1240.10 85 178 1.2E-4 T 06-07-2017 AM402_RS15980 c9667d24a0789c86b9e07fc697defe9c 273 SUPERFAMILY SSF56784 1 272 9.45E-69 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15980 c9667d24a0789c86b9e07fc697defe9c 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 2.1E-63 T 06-07-2017 IPR000150 Cof protein GO:0016787 AM402_RS15980 c9667d24a0789c86b9e07fc697defe9c 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 06-07-2017 AM402_RS15980 c9667d24a0789c86b9e07fc697defe9c 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 3.6E-20 T 06-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AM402_RS15980 c9667d24a0789c86b9e07fc697defe9c 273 Gene3D G3DSA:3.40.50.1000 179 272 1.5E-52 T 06-07-2017 IPR023214 HAD-like domain AM402_RS15980 c9667d24a0789c86b9e07fc697defe9c 273 Gene3D G3DSA:3.40.50.1000 1 73 1.5E-52 T 06-07-2017 IPR023214 HAD-like domain AM402_RS02855 a17003f55b6f84a2d2240707b41f509c 319 Gene3D G3DSA:3.40.50.1980 165 315 6.8E-34 T 06-07-2017 AM402_RS02855 a17003f55b6f84a2d2240707b41f509c 319 Pfam PF01497 Periplasmic binding protein 56 293 2.4E-30 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM402_RS02855 a17003f55b6f84a2d2240707b41f509c 319 SUPERFAMILY SSF53807 34 302 5.89E-65 T 06-07-2017 AM402_RS02855 a17003f55b6f84a2d2240707b41f509c 319 Gene3D G3DSA:3.40.50.1980 36 164 1.8E-29 T 06-07-2017 AM402_RS21835 ec302d8841f50d983261bcbbeff24e35 78 Pfam PF05052 MerE protein 2 74 8.1E-43 T 06-07-2017 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM402_RS21835 ec302d8841f50d983261bcbbeff24e35 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 2.0E-16 T 06-07-2017 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM402_RS10485 518057c6f9e06ef30bdcda3a445c68b6 969 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 754 960 1.3E-42 T 06-07-2017 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain AM402_RS18335 3c449597a6b5c19d7a1cc8b7ad907cd4 100 SUPERFAMILY SSF47413 7 74 1.58E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18335 3c449597a6b5c19d7a1cc8b7ad907cd4 100 Gene3D G3DSA:1.10.260.40 12 81 9.5E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18335 3c449597a6b5c19d7a1cc8b7ad907cd4 100 Pfam PF01381 Helix-turn-helix 16 69 6.0E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS18335 3c449597a6b5c19d7a1cc8b7ad907cd4 100 SMART SM00530 15 70 8.8E-8 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 390 39.209 T 06-07-2017 IPR017687 Outer membrane protein assembly factor BamB AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 SMART SM00564 198 229 2.2 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 SMART SM00564 61 93 7.0E-5 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 SMART SM00564 328 359 0.11 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 SMART SM00564 152 184 0.0023 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 SMART SM00564 287 318 170.0 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 SMART SM00564 249 280 0.0013 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 SMART SM00564 113 144 0.0073 T 06-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 Gene3D G3DSA:2.140.10.10 1 389 5.6E-74 T 06-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 388 1.9E-128 T 06-07-2017 IPR017687 Outer membrane protein assembly factor BamB AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 Pfam PF13360 PQQ-like domain 75 317 5.9E-54 T 06-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AM402_RS08655 06694a21be89472abdfdc61f62c02cd1 390 SUPERFAMILY SSF50998 23 382 3.63E-78 T 06-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM402_RS00295 2b58fdb0ff66746fa7fe514cfb1a0856 68 Gene3D G3DSA:3.30.1910.10 1 64 1.9E-32 T 06-07-2017 AM402_RS00295 2b58fdb0ff66746fa7fe514cfb1a0856 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 60 3.8E-28 T 06-07-2017 IPR009491 Protein of unknown function DUF1107 AM402_RS00295 2b58fdb0ff66746fa7fe514cfb1a0856 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 5.0E-24 T 06-07-2017 IPR009491 Protein of unknown function DUF1107 AM402_RS00575 98258a4c5fef9b6ca811d622906e64a9 865 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 603 617 - T 06-07-2017 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AM402_RS00575 98258a4c5fef9b6ca811d622906e64a9 865 PIRSF PIRSF001444 1 857 0.0 T 06-07-2017 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM402_RS00575 98258a4c5fef9b6ca811d622906e64a9 865 Pfam PF12633 Adenylate cyclase NT domain 5 201 5.3E-78 T 06-07-2017 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AM402_RS00575 98258a4c5fef9b6ca811d622906e64a9 865 Pfam PF01295 Adenylate cyclase, class-I 229 829 3.4E-257 T 06-07-2017 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM402_RS00575 98258a4c5fef9b6ca811d622906e64a9 865 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 243 254 - T 06-07-2017 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 AM402_RS18920 3138ea017b889f53ca4bd4e6d3c54cac 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 1.6E-39 T 06-07-2017 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AM402_RS18920 3138ea017b889f53ca4bd4e6d3c54cac 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 2.1E-18 T 06-07-2017 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AM402_RS19915 2fab5ccba2591d7bc29e2b17b53a431e 398 Gene3D G3DSA:1.20.1250.20 204 385 1.8E-15 T 06-07-2017 AM402_RS19915 2fab5ccba2591d7bc29e2b17b53a431e 398 Pfam PF07690 Major Facilitator Superfamily 32 333 2.9E-20 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS19915 2fab5ccba2591d7bc29e2b17b53a431e 398 SUPERFAMILY SSF103473 3 388 4.71E-45 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS19915 2fab5ccba2591d7bc29e2b17b53a431e 398 Gene3D G3DSA:1.20.1250.20 10 189 2.1E-14 T 06-07-2017 AM402_RS06615 6e339c927376319c0267f1247bd9efc5 165 Gene3D G3DSA:2.60.40.1090 23 165 1.4E-26 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06615 6e339c927376319c0267f1247bd9efc5 165 SUPERFAMILY SSF49401 23 165 3.63E-28 T 06-07-2017 IPR008966 Adhesion domain AM402_RS06615 6e339c927376319c0267f1247bd9efc5 165 Pfam PF00419 Fimbrial protein 25 164 1.8E-12 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS09885 4b121bc729fa3a6d42535a22f73aff62 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 4.6E-116 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS09885 4b121bc729fa3a6d42535a22f73aff62 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 490 5.9E-224 T 06-07-2017 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AM402_RS09885 4b121bc729fa3a6d42535a22f73aff62 494 Pfam PF00474 Sodium:solute symporter family 35 437 2.2E-134 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS09885 4b121bc729fa3a6d42535a22f73aff62 494 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM402_RS09885 4b121bc729fa3a6d42535a22f73aff62 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM402_RS08690 08b340b79113309fd8c8be054eb76206 343 Gene3D G3DSA:3.40.190.10 185 306 2.5E-25 T 06-07-2017 AM402_RS08690 08b340b79113309fd8c8be054eb76206 343 Gene3D G3DSA:3.40.190.10 32 179 5.0E-43 T 06-07-2017 AM402_RS08690 08b340b79113309fd8c8be054eb76206 343 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 27 337 1.5E-148 T 06-07-2017 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM402_RS08690 08b340b79113309fd8c8be054eb76206 343 SUPERFAMILY SSF53850 31 336 8.07E-75 T 06-07-2017 AM402_RS08690 08b340b79113309fd8c8be054eb76206 343 Pfam PF13531 Bacterial extracellular solute-binding protein 52 291 2.8E-41 T 06-07-2017 AM402_RS03590 76ae569bd748b6733d0dacec7a4bdc8d 211 SUPERFAMILY SSF54534 3 140 6.48E-32 T 06-07-2017 AM402_RS03590 76ae569bd748b6733d0dacec7a4bdc8d 211 Gene3D G3DSA:3.10.50.40 126 141 4.2E-17 T 06-07-2017 AM402_RS03590 76ae569bd748b6733d0dacec7a4bdc8d 211 Gene3D G3DSA:3.10.50.40 3 80 4.2E-17 T 06-07-2017 AM402_RS03590 76ae569bd748b6733d0dacec7a4bdc8d 211 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 136 1.1E-9 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AM402_RS13465 c8591578a1d7cfb790403a87d95b06ba 188 PIRSF PIRSF030780 1 186 1.4E-61 T 06-07-2017 IPR016956 Inner membrane protein YdjM AM402_RS13465 c8591578a1d7cfb790403a87d95b06ba 188 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 156 2.5E-32 T 06-07-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AM402_RS17260 89a2fc664ff7f29c5ade393186b5d33c 250 SUPERFAMILY SSF141523 38 158 2.22E-9 T 06-07-2017 AM402_RS17260 89a2fc664ff7f29c5ade393186b5d33c 250 Pfam PF03734 L,D-transpeptidase catalytic domain 43 159 2.0E-7 T 06-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM402_RS01120 dafb5edb09a900896b2596b61752c1f1 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 5.8E-8 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS01120 dafb5edb09a900896b2596b61752c1f1 226 SUPERFAMILY SSF46689 8 81 8.51E-13 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS01120 dafb5edb09a900896b2596b61752c1f1 226 Gene3D G3DSA:1.10.357.10 8 197 8.8E-36 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 SMART SM00912 98 218 1.0E-48 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 117 211 1.2E-21 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05860 haemagglutination activity domain 85 213 1.2E-30 T 06-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF13332 Haemagluttinin repeat 2527 2698 4.4E-42 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF13332 Haemagluttinin repeat 2381 2479 4.9E-5 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF13332 Haemagluttinin repeat 2295 2380 3.6E-5 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF13332 Haemagluttinin repeat 2224 2292 0.0061 T 06-07-2017 IPR025157 Haemagluttinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 SUPERFAMILY SSF51126 88 364 1.1E-62 T 06-07-2017 IPR011050 Pectin lyase fold/virulence factor AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Gene3D G3DSA:2.160.20.10 86 379 1.7E-95 T 06-07-2017 IPR012334 Pectin lyase fold AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF13018 Extended Signal Peptide of Type V secretion system 13 37 2.7E-5 T 06-07-2017 IPR024973 ESPR domain AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 1000 1031 3.7 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 1714 1756 76.0 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 755 824 22.0 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 700 733 1.0 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 835 901 5.7E-5 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 1364 1418 0.07 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 1179 1245 0.081 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 587 646 20.0 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 347 435 0.0015 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 656 690 0.74 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 1268 1330 0.0021 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 535 577 2.8 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 1117 1166 1.9 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 947 988 2.5 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 1036 1101 0.081 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF05594 Haemagluttinin repeat 1454 1527 0.049 T 06-07-2017 IPR008619 Filamentous haemagglutinin repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF14437 MafB19-like deaminase 3349 3440 3.5E-10 T 06-07-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 Pfam PF04829 Pre-toxin domain with VENN motif 3053 3103 2.2E-17 T 06-07-2017 IPR006914 VENN motif-containing domain AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 478 515 0.0047 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1233 1256 0.81 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 945 977 0.11 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1127 1150 0.11 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 871 905 1.8E-4 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 364 398 1.0E-4 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 731 765 2.7 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1091 1123 0.003 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1467 1505 0.0054 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1300 1338 2.0E-7 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1047 1085 2.2E-4 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1406 1442 0.15 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 837 867 0.059 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 563 596 0.043 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 523 557 0.014 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 754 780 0.62 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1487 1527 0.011 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1330 1360 0.98 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 789 829 0.0094 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1719 1758 2.8E-5 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1151 1196 0.14 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1259 1298 3.2E-4 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 330 364 0.0019 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 960 990 0.37 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1197 1236 6.1E-5 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1004 1043 8.3E-6 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 646 682 4.3E-4 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS17520 b49bcdd67512015bd1180e7d16017fdb 3452 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1131 1164 0.09 T 06-07-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM402_RS05790 0cd94050862be466112103c0b564ad7c 450 PIRSF PIRSF006446 2 450 8.3E-214 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AM402_RS05790 0cd94050862be466112103c0b564ad7c 450 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 1.6E-161 T 06-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AM402_RS03420 d8ae5af0f8b829372bf307bbe25db92d 68 SUPERFAMILY SSF55331 2 65 4.23E-23 T 06-07-2017 IPR014347 Tautomerase/MIF superfamily AM402_RS03420 d8ae5af0f8b829372bf307bbe25db92d 68 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 63 2.1E-28 T 06-07-2017 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 AM402_RS03420 d8ae5af0f8b829372bf307bbe25db92d 68 Pfam PF01361 Tautomerase enzyme 2 61 2.9E-23 T 06-07-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AM402_RS03420 d8ae5af0f8b829372bf307bbe25db92d 68 Gene3D G3DSA:3.30.429.20 1 61 8.8E-30 T 06-07-2017 AM402_RS17240 6339c81b3c40c03b551323b600c2f6b0 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 2.1E-105 T 06-07-2017 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AM402_RS17240 6339c81b3c40c03b551323b600c2f6b0 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 1.4E-62 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM402_RS17240 6339c81b3c40c03b551323b600c2f6b0 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 37.039 T 06-07-2017 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AM402_RS17240 6339c81b3c40c03b551323b600c2f6b0 209 PIRSF PIRSF006102 3 209 3.2E-71 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM402_RS13505 037fe2c88519992681ea28201388b7a0 165 SMART SM00065 23 161 0.0029 T 06-07-2017 IPR003018 GAF domain GO:0005515 AM402_RS13505 037fe2c88519992681ea28201388b7a0 165 Gene3D G3DSA:3.30.450.40 3 149 7.7E-48 T 06-07-2017 IPR029016 GAF domain-like AM402_RS13505 037fe2c88519992681ea28201388b7a0 165 SUPERFAMILY SSF55781 3 151 8.1E-41 T 06-07-2017 IPR029016 GAF domain-like AM402_RS13505 037fe2c88519992681ea28201388b7a0 165 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 90 107 - T 06-07-2017 IPR000614 Free Met sulfoxide reductase conserved site AM402_RS13505 037fe2c88519992681ea28201388b7a0 165 Pfam PF13185 GAF domain 47 145 7.9E-7 T 06-07-2017 IPR003018 GAF domain GO:0005515 AM402_RS07150 7822d0e6da1520fbf32a71c6739e94b0 356 Pfam PF07470 Glycosyl Hydrolase Family 88 44 352 5.1E-70 T 06-07-2017 IPR010905 Glycosyl hydrolase, family 88 AM402_RS07150 7822d0e6da1520fbf32a71c6739e94b0 356 Gene3D G3DSA:1.50.10.10 8 352 8.5E-82 T 06-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AM402_RS07150 7822d0e6da1520fbf32a71c6739e94b0 356 SUPERFAMILY SSF48208 38 354 2.47E-52 T 06-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM402_RS13335 368dc6c26021eb2d9d65a1fad0165345 297 SUPERFAMILY SSF88713 86 267 2.72E-29 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM402_RS13335 368dc6c26021eb2d9d65a1fad0165345 297 SUPERFAMILY SSF88713 14 41 2.72E-29 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM402_RS13335 368dc6c26021eb2d9d65a1fad0165345 297 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 65.073 T 06-07-2017 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 AM402_RS13335 368dc6c26021eb2d9d65a1fad0165345 297 Gene3D G3DSA:3.20.20.370 82 267 3.3E-31 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM402_RS13335 368dc6c26021eb2d9d65a1fad0165345 297 Gene3D G3DSA:3.20.20.370 13 38 3.3E-31 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM402_RS13335 368dc6c26021eb2d9d65a1fad0165345 297 Pfam PF01522 Polysaccharide deacetylase 15 170 8.2E-12 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 SUPERFAMILY SSF51726 394 754 3.14E-121 T 06-07-2017 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 PIRSF PIRSF000382 2 757 0.0 T 06-07-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 SUPERFAMILY SSF51726 6 392 8.63E-114 T 06-07-2017 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 Gene3D G3DSA:3.20.20.210 5 387 1.1E-148 T 06-07-2017 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 313 2.2E-124 T 06-07-2017 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 756 37.34 T 06-07-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 Gene3D G3DSA:3.20.20.210 390 756 3.4E-135 T 06-07-2017 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 755 0.0 T 06-07-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM402_RS20360 90fc33385c7640c08b8d0f4cac96eb11 757 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 3.5E-157 T 06-07-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM402_RS16325 2b3e2127c0a3804064d636ba4fb4a0b1 844 Pfam PF13954 PapC N-terminal domain 38 182 7.1E-41 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS16325 2b3e2127c0a3804064d636ba4fb4a0b1 844 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 308 318 - T 06-07-2017 IPR018030 Fimbrial membrane usher, conserved site AM402_RS16325 2b3e2127c0a3804064d636ba4fb4a0b1 844 SUPERFAMILY SSF141729 61 173 6.15E-27 T 06-07-2017 AM402_RS16325 2b3e2127c0a3804064d636ba4fb4a0b1 844 Pfam PF00577 Outer membrane usher protein 196 745 1.4E-152 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS16325 2b3e2127c0a3804064d636ba4fb4a0b1 844 Pfam PF13953 PapC C-terminal domain 760 823 2.8E-17 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS02715 25a129064761b45885fc4616b91d151e 232 SUPERFAMILY SSF55120 12 231 1.34E-55 T 06-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS02715 25a129064761b45885fc4616b91d151e 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 06-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS02715 25a129064761b45885fc4616b91d151e 232 Pfam PF00849 RNA pseudouridylate synthase 25 180 1.2E-27 T 06-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM402_RS12470 80a6ee9d9a6c852aea625fcf392c452b 281 Gene3D G3DSA:1.10.10.60 232 279 6.8E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12470 80a6ee9d9a6c852aea625fcf392c452b 281 Gene3D G3DSA:2.60.120.280 33 161 4.9E-6 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM402_RS12470 80a6ee9d9a6c852aea625fcf392c452b 281 SUPERFAMILY SSF46689 233 279 3.18E-8 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS12470 80a6ee9d9a6c852aea625fcf392c452b 281 Pfam PF12833 Helix-turn-helix domain 198 277 9.5E-15 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12470 80a6ee9d9a6c852aea625fcf392c452b 281 SMART SM00342 192 275 1.0E-14 T 06-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM402_RS12470 80a6ee9d9a6c852aea625fcf392c452b 281 SUPERFAMILY SSF51215 34 156 2.62E-5 T 06-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM402_RS10595 6330584d7b97ff9b10f2ce4f7bc80564 230 Gene3D G3DSA:1.10.260.40 3 65 7.1E-19 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS10595 6330584d7b97ff9b10f2ce4f7bc80564 230 SUPERFAMILY SSF47413 4 63 7.88E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS10595 6330584d7b97ff9b10f2ce4f7bc80564 230 Pfam PF01381 Helix-turn-helix 8 60 2.5E-11 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS10595 6330584d7b97ff9b10f2ce4f7bc80564 230 Gene3D G3DSA:2.10.109.10 106 224 7.2E-14 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS10595 6330584d7b97ff9b10f2ce4f7bc80564 230 Pfam PF00717 Peptidase S24-like 145 207 1.3E-7 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS10595 6330584d7b97ff9b10f2ce4f7bc80564 230 SMART SM00530 6 60 1.1E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS10595 6330584d7b97ff9b10f2ce4f7bc80564 230 SUPERFAMILY SSF51306 107 225 4.53E-19 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS02335 1cb084b1382776a021a7ab59f0b70aa9 146 SUPERFAMILY SSF52218 1 146 2.19E-41 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS02335 1cb084b1382776a021a7ab59f0b70aa9 146 Pfam PF00258 Flavodoxin 7 138 7.2E-28 T 06-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM402_RS02335 1cb084b1382776a021a7ab59f0b70aa9 146 PRINTS PR00369 Flavodoxin signature 106 125 1.5E-7 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM402_RS02335 1cb084b1382776a021a7ab59f0b70aa9 146 PRINTS PR00369 Flavodoxin signature 51 62 1.5E-7 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM402_RS02335 1cb084b1382776a021a7ab59f0b70aa9 146 PRINTS PR00369 Flavodoxin signature 82 92 1.5E-7 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM402_RS02335 1cb084b1382776a021a7ab59f0b70aa9 146 PRINTS PR00369 Flavodoxin signature 5 18 1.5E-7 T 06-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM402_RS02335 1cb084b1382776a021a7ab59f0b70aa9 146 Gene3D G3DSA:3.40.50.360 1 145 8.9E-38 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS05415 9839606b3e0dc4ab495d09ae935daf1d 1230 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 785 918 2.5E-15 T 06-07-2017 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM402_RS05415 9839606b3e0dc4ab495d09ae935daf1d 1230 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 1073 1148 3.0E-27 T 06-07-2017 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM402_RS01290 9056a24f1049706fcaa2b266938be667 142 Pfam PF05656 Protein of unknown function (DUF805) 8 131 3.5E-18 T 06-07-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 PRINTS PR01806 Virulence factor MviN signature 33 52 5.6E-84 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 PRINTS PR01806 Virulence factor MviN signature 409 426 5.6E-84 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 PRINTS PR01806 Virulence factor MviN signature 133 157 5.6E-84 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 PRINTS PR01806 Virulence factor MviN signature 157 178 5.6E-84 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 PRINTS PR01806 Virulence factor MviN signature 52 68 5.6E-84 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 PRINTS PR01806 Virulence factor MviN signature 357 376 5.6E-84 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 PRINTS PR01806 Virulence factor MviN signature 259 285 5.6E-84 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 Pfam PF03023 MviN-like protein 28 478 9.5E-153 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 4.4E-161 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13105 05f5a32de8425006322e9bcadadc3510 511 PIRSF PIRSF002869 1 511 3.7E-176 T 06-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AM402_RS13170 2922c003a02f7687d88ad1a0e40379e9 271 Pfam PF13369 Transglutaminase-like superfamily 36 186 2.5E-38 T 06-07-2017 IPR032698 Protein SirB1, N-terminal AM402_RS13170 2922c003a02f7687d88ad1a0e40379e9 271 Gene3D G3DSA:1.25.40.10 192 252 4.9E-5 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS13170 2922c003a02f7687d88ad1a0e40379e9 271 Pfam PF13371 Tetratricopeptide repeat 189 260 7.8E-25 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS17755 2d29166efc5cd05e42829f88e1d9ff1f 307 PIRSF PIRSF037112 2 307 9.3E-104 T 06-07-2017 IPR017113 Antirestriction, ArdC AM402_RS17755 2d29166efc5cd05e42829f88e1d9ff1f 307 Pfam PF08401 Domain of unknown function (DUF1738) 15 136 2.0E-35 T 06-07-2017 IPR013610 Domain of unknown function DUF1738 AM402_RS04725 149d12dfe972897d10249011fab5b623 212 Gene3D G3DSA:1.10.530.10 27 60 2.6E-12 T 06-07-2017 AM402_RS04725 149d12dfe972897d10249011fab5b623 212 Gene3D G3DSA:1.10.530.10 102 157 2.6E-12 T 06-07-2017 AM402_RS04725 149d12dfe972897d10249011fab5b623 212 Pfam PF01464 Transglycosylase SLT domain 30 157 2.7E-9 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS04725 149d12dfe972897d10249011fab5b623 212 SUPERFAMILY SSF53955 27 74 5.63E-16 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS04725 149d12dfe972897d10249011fab5b623 212 SUPERFAMILY SSF53955 102 175 5.63E-16 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS19560 4a4b5d382bdb87dec576f76303761321 196 Gene3D G3DSA:3.40.50.10490 3 191 3.1E-52 T 06-07-2017 AM402_RS19560 4a4b5d382bdb87dec576f76303761321 196 SUPERFAMILY SSF53697 3 191 9.91E-49 T 06-07-2017 AM402_RS19560 4a4b5d382bdb87dec576f76303761321 196 Pfam PF13580 SIS domain 9 144 1.0E-32 T 06-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AM402_RS06870 1761798f6119e657791a29943db360e1 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.8E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM402_RS06870 1761798f6119e657791a29943db360e1 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.8E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM402_RS06870 1761798f6119e657791a29943db360e1 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.8E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM402_RS06870 1761798f6119e657791a29943db360e1 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.8E-30 T 06-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM402_RS06870 1761798f6119e657791a29943db360e1 463 Gene3D G3DSA:3.40.50.620 19 305 2.8E-112 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS06870 1761798f6119e657791a29943db360e1 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.8E-140 T 06-07-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AM402_RS06870 1761798f6119e657791a29943db360e1 463 SUPERFAMILY SSF47323 316 461 2.48E-43 T 06-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM402_RS06870 1761798f6119e657791a29943db360e1 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 461 3.7E-193 T 06-07-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM402_RS06870 1761798f6119e657791a29943db360e1 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 462 39.291 T 06-07-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM402_RS06870 1761798f6119e657791a29943db360e1 463 SMART SM00840 341 402 2.0E-28 T 06-07-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM402_RS06870 1761798f6119e657791a29943db360e1 463 Gene3D G3DSA:1.20.120.640 306 392 8.7E-28 T 06-07-2017 AM402_RS06870 1761798f6119e657791a29943db360e1 463 SUPERFAMILY SSF52374 1 313 1.58E-101 T 06-07-2017 AM402_RS06870 1761798f6119e657791a29943db360e1 463 Pfam PF09190 DALR domain 341 402 2.0E-25 T 06-07-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM402_RS11240 e9af01364cb5ff4d2a0141afb56a88f1 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 9.3E-16 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS11240 e9af01364cb5ff4d2a0141afb56a88f1 122 Gene3D G3DSA:2.60.300.12 18 111 1.7E-26 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS11240 e9af01364cb5ff4d2a0141afb56a88f1 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 6.0E-31 T 06-07-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AM402_RS11240 e9af01364cb5ff4d2a0141afb56a88f1 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 06-07-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site AM402_RS11240 e9af01364cb5ff4d2a0141afb56a88f1 122 SUPERFAMILY SSF89360 18 111 4.12E-26 T 06-07-2017 IPR000361 FeS cluster biogenesis AM402_RS01975 4c37a493212560b4e9eaa8c27e5eb9db 323 Pfam PF00795 Carbon-nitrogen hydrolase 8 282 3.1E-47 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS01975 4c37a493212560b4e9eaa8c27e5eb9db 323 Gene3D G3DSA:3.60.110.10 6 305 7.0E-66 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS01975 4c37a493212560b4e9eaa8c27e5eb9db 323 SUPERFAMILY SSF56317 213 305 2.22E-59 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS01975 4c37a493212560b4e9eaa8c27e5eb9db 323 SUPERFAMILY SSF56317 5 179 2.22E-59 T 06-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 103 120 - T 06-07-2017 IPR018046 Pili assembly chaperone, conserved site AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 Gene3D G3DSA:2.60.40.360 28 145 6.0E-44 T 06-07-2017 IPR008962 PapD-like AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 232 2.4E-16 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 SUPERFAMILY SSF49584 154 245 1.14E-24 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 Gene3D G3DSA:2.60.40.1070 154 244 3.3E-28 T 06-07-2017 IPR016148 Pili assembly chaperone, C-terminal AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 PRINTS PR00969 Pili chaperone signature 166 181 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 PRINTS PR00969 Pili chaperone signature 127 142 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 PRINTS PR00969 Pili chaperone signature 74 95 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 PRINTS PR00969 Pili chaperone signature 28 37 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 PRINTS PR00969 Pili chaperone signature 104 121 1.3E-34 T 06-07-2017 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 SUPERFAMILY SSF49354 28 145 9.42E-39 T 06-07-2017 IPR008962 PapD-like AM402_RS18150 0eddd4ad3e681a06aefdd5b5c69a52f2 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 145 5.7E-37 T 06-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM402_RS05540 511e7c2e4730c86eaedc315a5c4c46ac 99 Pfam PF05247 Flagellar transcriptional activator (FlhD) 5 79 3.3E-10 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS05540 511e7c2e4730c86eaedc315a5c4c46ac 99 SUPERFAMILY SSF63592 1 91 3.66E-22 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS05540 511e7c2e4730c86eaedc315a5c4c46ac 99 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 78 0.007 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS09840 486477bef1763cd7150723b0ac03d98b 380 Gene3D G3DSA:3.40.50.1820 99 182 3.2E-5 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS09840 486477bef1763cd7150723b0ac03d98b 380 SUPERFAMILY SSF53474 139 222 1.21E-6 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS19055 6f40931f9f92f570baee12017107a423 380 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 5.3E-193 T 06-07-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM402_RS19055 6f40931f9f92f570baee12017107a423 380 Gene3D G3DSA:3.20.20.105 1 367 8.7E-171 T 06-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM402_RS19055 6f40931f9f92f570baee12017107a423 380 SUPERFAMILY SSF51713 2 364 2.88E-163 T 06-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM402_RS19055 6f40931f9f92f570baee12017107a423 380 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 4.6E-94 T 06-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM402_RS19055 6f40931f9f92f570baee12017107a423 380 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 2.6E-182 T 06-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM402_RS19055 6f40931f9f92f570baee12017107a423 380 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.542 T 06-07-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 SUPERFAMILY SSF55031 220 326 7.48E-19 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 Gene3D G3DSA:3.40.630.10 85 215 5.6E-73 T 06-07-2017 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 Gene3D G3DSA:3.40.630.10 329 421 5.6E-73 T 06-07-2017 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 Gene3D G3DSA:3.40.630.10 6 47 5.6E-73 T 06-07-2017 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 Gene3D G3DSA:3.30.70.360 221 326 5.3E-23 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 Pfam PF01546 Peptidase family M20/M25/M40 103 417 9.6E-20 T 06-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 Pfam PF07687 Peptidase dimerisation domain 222 297 8.2E-8 T 06-07-2017 IPR011650 Peptidase M20, dimerisation domain AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 PIRSF PIRSF005962 2 421 3.4E-103 T 06-07-2017 IPR017439 Amidohydrolase GO:0016787 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 8 408 1.7E-85 T 06-07-2017 IPR017439 Amidohydrolase GO:0016787 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 SUPERFAMILY SSF53187 85 233 2.23E-61 T 06-07-2017 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 SUPERFAMILY SSF53187 5 47 2.23E-61 T 06-07-2017 AM402_RS19640 a48f297cc93baa2cc780c87d88984f7b 421 SUPERFAMILY SSF53187 332 420 2.23E-61 T 06-07-2017 AM402_RS19135 2d4f981485390b3ffb332b365b0aef1f 445 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 416 3.3E-153 T 06-07-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM402_RS19135 2d4f981485390b3ffb332b365b0aef1f 445 Pfam PF05525 Branched-chain amino acid transport protein 8 429 2.0E-151 T 06-07-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 Gene3D G3DSA:3.40.50.180 156 342 1.9E-84 T 06-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 SUPERFAMILY SSF52172 1 108 1.57E-27 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 Gene3D G3DSA:3.40.50.2300 2 108 1.8E-27 T 06-07-2017 AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 PIRSF PIRSF000876 1 347 6.1E-138 T 06-07-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 Pfam PF00072 Response regulator receiver domain 6 109 7.1E-24 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 SMART SM00448 4 116 4.0E-23 T 06-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 SUPERFAMILY SSF52738 157 339 4.97E-75 T 06-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 343 40.631 T 06-07-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM402_RS09640 71571b29e714a506fa0c3cc63c93519c 350 Pfam PF01339 CheB methylesterase 160 336 2.0E-63 T 06-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM402_RS02615 f244e1c05b24298a37e1bd1df515fff1 207 Pfam PF16449 Fimbrillin MatB 29 194 2.5E-86 T 06-07-2017 IPR016514 Fimbrial protein MatB AM402_RS05750 6f46183426e1168b72c791a898d335d5 341 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 337 6.2E-104 T 06-07-2017 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AM402_RS05750 6f46183426e1168b72c791a898d335d5 341 Pfam PF03741 Integral membrane protein TerC family 73 299 5.8E-42 T 06-07-2017 IPR005496 Integral membrane protein TerC GO:0016021 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 PIRSF PIRSF003165 1 167 1.5E-51 T 06-07-2017 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AM402_RS04210 56d44354390691488c3ce293c70c6587 172 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 107 129 2.7E-15 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 51 70 2.7E-15 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 75 97 2.7E-15 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 26 49 2.7E-15 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 24 154 1.8E-35 T 06-07-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 Gene3D G3DSA:1.25.40.10 36 137 2.2E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 Pfam PF07720 Tetratricopeptide repeat 75 101 9.0E-8 T 06-07-2017 IPR011716 Tetratricopeptide TPR-3 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 Pfam PF07720 Tetratricopeptide repeat 40 73 1.7E-9 T 06-07-2017 IPR011716 Tetratricopeptide TPR-3 AM402_RS04210 56d44354390691488c3ce293c70c6587 172 SUPERFAMILY SSF48452 38 138 2.76E-10 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS03100 d500865291ef5303058d4d1913647024 853 SMART SM00825 Beta-ketoacyl synthase 8 403 4.0E-13 T 06-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM402_RS03100 d500865291ef5303058d4d1913647024 853 SUPERFAMILY SSF53901 490 694 1.73E-28 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 SUPERFAMILY SSF53901 413 453 1.73E-28 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 SUPERFAMILY SSF53901 660 851 2.09E-29 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 06-07-2017 IPR018201 Beta-ketoacyl synthase, active site AM402_RS03100 d500865291ef5303058d4d1913647024 853 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 237 1.0E-26 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AM402_RS03100 d500865291ef5303058d4d1913647024 853 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 514 685 5.7E-16 T 06-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AM402_RS03100 d500865291ef5303058d4d1913647024 853 Gene3D G3DSA:3.40.47.10 254 398 8.7E-49 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 Gene3D G3DSA:3.40.47.10 720 851 2.3E-14 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 Gene3D G3DSA:3.40.47.10 8 249 1.7E-35 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 SUPERFAMILY SSF53901 217 398 3.09E-56 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 695 807 2.1E-11 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal AM402_RS03100 d500865291ef5303058d4d1913647024 853 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 245 358 3.5E-35 T 06-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal AM402_RS03100 d500865291ef5303058d4d1913647024 853 SUPERFAMILY SSF53901 6 244 1.02E-34 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 Gene3D G3DSA:3.40.47.10 488 700 4.2E-27 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS03100 d500865291ef5303058d4d1913647024 853 Gene3D G3DSA:3.40.47.10 409 453 4.2E-27 T 06-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 SUPERFAMILY SSF81338 8 258 2.09E-76 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 Pfam PF00230 Major intrinsic protein 5 252 8.2E-64 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 ProSitePatterns PS00221 MIP family signature. 67 75 - T 06-07-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 Gene3D G3DSA:1.20.1080.10 4 259 1.3E-84 T 06-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 252 2.5E-66 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 PRINTS PR00783 Major intrinsic protein family signature 185 207 1.4E-49 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 PRINTS PR00783 Major intrinsic protein family signature 10 29 1.4E-49 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 PRINTS PR00783 Major intrinsic protein family signature 86 105 1.4E-49 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 PRINTS PR00783 Major intrinsic protein family signature 152 170 1.4E-49 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 PRINTS PR00783 Major intrinsic protein family signature 49 73 1.4E-49 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS01270 21fd7977b43bf44643125441f1c73ba8 271 PRINTS PR00783 Major intrinsic protein family signature 235 255 1.4E-49 T 06-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 7.9E-6 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 7.9E-6 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 1.7E-52 T 06-07-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 Pfam PF00117 Glutamine amidotransferase class-I 6 186 3.0E-42 T 06-07-2017 IPR017926 Glutamine amidotransferase AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 5.9E-14 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 5.9E-14 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 5.9E-14 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 SUPERFAMILY SSF52317 4 191 1.02E-46 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 Gene3D G3DSA:3.40.50.880 3 190 4.0E-54 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.4E-34 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.4E-34 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.4E-34 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.4E-34 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.4E-34 T 06-07-2017 AM402_RS11995 1d0fcea88ba51c4978d31bbb8045e3d4 197 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.4E-34 T 06-07-2017 AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 06-07-2017 IPR019844 Cold-shock conserved site AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 SUPERFAMILY SSF50249 4 69 1.34E-25 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.0E-33 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 PRINTS PR00050 Cold shock protein signature 43 61 1.2E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 PRINTS PR00050 Cold shock protein signature 28 37 1.2E-17 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 Gene3D G3DSA:2.40.50.140 5 68 7.5E-32 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 PIRSF PIRSF002599 1 70 4.4E-26 T 06-07-2017 IPR012156 Cold shock, CspA GO:0003676 AM402_RS09580 cea0fa1e1109780969dc9bb55c45466b 70 SMART SM00357 6 70 3.4E-31 T 06-07-2017 IPR011129 Cold shock protein GO:0003676 AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 SUPERFAMILY SSF160544 250 354 2.49E-39 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 346 1.1E-122 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 352 1.0E-126 T 06-07-2017 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.1E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.1E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.1E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.1E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 2.1E-37 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS09660 b692b0ca140216fb9c01cd1de21800e3 382 Gene3D G3DSA:3.40.1690.10 218 356 9.7E-63 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal AM402_RS17170 a31879920366242e0f48cff71616bb58 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 4.6E-184 T 06-07-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM402_RS17170 a31879920366242e0f48cff71616bb58 417 SUPERFAMILY SSF53720 2 414 8.64E-114 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS17170 a31879920366242e0f48cff71616bb58 417 Gene3D G3DSA:3.40.309.10 223 374 4.8E-42 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS17170 a31879920366242e0f48cff71616bb58 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 06-07-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM402_RS17170 a31879920366242e0f48cff71616bb58 417 Gene3D G3DSA:3.40.605.10 375 415 1.6E-103 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM402_RS17170 a31879920366242e0f48cff71616bb58 417 Gene3D G3DSA:3.40.605.10 2 220 1.6E-103 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM402_RS17170 a31879920366242e0f48cff71616bb58 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.072 T 06-07-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM402_RS17170 a31879920366242e0f48cff71616bb58 417 PIRSF PIRSF000151 1 417 6.5E-175 T 06-07-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM402_RS17170 a31879920366242e0f48cff71616bb58 417 Pfam PF00171 Aldehyde dehydrogenase family 4 283 1.6E-15 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM402_RS21795 96a2f3482ddae1cfa60cf4d16efb69d2 292 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 6 275 5.3E-80 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM402_RS21795 96a2f3482ddae1cfa60cf4d16efb69d2 292 SUPERFAMILY SSF56596 7 286 2.48E-58 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM402_RS21795 96a2f3482ddae1cfa60cf4d16efb69d2 292 Gene3D G3DSA:3.50.14.10 6 221 5.3E-63 T 06-07-2017 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 AM402_RS20045 7700466cc717c4133111aa43f7343732 224 Pfam PF02592 Putative vitamin uptake transporter 43 198 6.7E-34 T 06-07-2017 IPR003744 Protein of unknown function DUF165 AM402_RS20045 7700466cc717c4133111aa43f7343732 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 204 4.0E-61 T 06-07-2017 IPR003744 Protein of unknown function DUF165 AM402_RS09145 d96f700e8abc278dccf4d55473b29769 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.907 T 06-07-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09145 d96f700e8abc278dccf4d55473b29769 325 Pfam PF00146 NADH dehydrogenase 17 317 2.4E-120 T 06-07-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09145 d96f700e8abc278dccf4d55473b29769 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 06-07-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09145 d96f700e8abc278dccf4d55473b29769 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 06-07-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 SUPERFAMILY SSF51658 3 437 4.24E-176 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 3 436 1.8E-217 T 06-07-2017 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 228 252 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 91 113 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 332 343 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 132 152 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 179 200 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 206 225 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 299 310 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 155 174 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 PRINTS PR00688 Xylose isomerase signature 270 297 2.9E-84 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 Hamap MF_00455 Xylose isomerase [xylA]. 10 436 53.108 T 06-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AM402_RS12345 8f47c6c09425b6977e9458f08bd64db2 438 Gene3D G3DSA:3.20.20.150 2 438 3.6E-212 T 06-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AM402_RS05800 01553d3aa3bf0069b6ca5a10d952f763 59 Pfam PF10617 Protein of unknown function (DUF2474) 21 58 2.5E-17 T 06-07-2017 IPR018895 Protein of unknown function DUF2474 AM402_RS11410 959b51a0f5105750386b4526f9efaba5 272 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 21 255 1.9E-32 T 06-07-2017 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain AM402_RS05620 bad36ca7816227de517884910034117f 578 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 99 311 2.3E-12 T 06-07-2017 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM402_RS05620 bad36ca7816227de517884910034117f 578 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 343 469 4.6E-12 T 06-07-2017 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM402_RS05620 bad36ca7816227de517884910034117f 578 Gene3D G3DSA:3.40.640.10 121 433 4.1E-54 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS05620 bad36ca7816227de517884910034117f 578 SUPERFAMILY SSF53383 521 566 8.05E-68 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS05620 bad36ca7816227de517884910034117f 578 SUPERFAMILY SSF53383 87 472 8.05E-68 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS11460 712441a424b3d4ed5ea28befcc87f04c 75 ProDom PD057771 CRO REGULATORY TRANSCRIPTION CP-933R REPRESSOR DNA-BINDING REGULATION BACTERIOPHAGE PROTEIN REGULATOR 1 74 5.0E-22 T 06-07-2017 IPR020114 Cro repressor, HK022-type AM402_RS11460 712441a424b3d4ed5ea28befcc87f04c 75 SUPERFAMILY SSF47413 12 65 2.98E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS11460 712441a424b3d4ed5ea28befcc87f04c 75 Gene3D G3DSA:1.10.260.40 12 65 6.5E-9 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS14445 3000539586a3913f217085fbd70f727c 112 PIRSF PIRSF028773 1 111 3.2E-51 T 06-07-2017 IPR007458 Protein of unknown function DUF496 AM402_RS14445 3000539586a3913f217085fbd70f727c 112 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 1.0E-38 T 06-07-2017 IPR007458 Protein of unknown function DUF496 AM402_RS14445 3000539586a3913f217085fbd70f727c 112 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.749 T 06-07-2017 IPR007458 Protein of unknown function DUF496 AM402_RS14445 3000539586a3913f217085fbd70f727c 112 Pfam PF04363 Protein of unknown function (DUF496) 9 100 6.8E-46 T 06-07-2017 IPR007458 Protein of unknown function DUF496 AM402_RS13630 a9d3fa6a2c5894d0b34396c71a3dc0b6 408 Gene3D G3DSA:3.40.50.620 15 235 2.1E-33 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS13630 a9d3fa6a2c5894d0b34396c71a3dc0b6 408 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 233 6.5E-16 T 06-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM402_RS13630 a9d3fa6a2c5894d0b34396c71a3dc0b6 408 SUPERFAMILY SSF52402 11 234 2.79E-37 T 06-07-2017 AM402_RS13630 a9d3fa6a2c5894d0b34396c71a3dc0b6 408 Pfam PF11922 Domain of unknown function (DUF3440) 239 342 2.7E-26 T 06-07-2017 IPR021845 Protein of unknown function DUF3440 AM402_RS13630 a9d3fa6a2c5894d0b34396c71a3dc0b6 408 Pfam PF11922 Domain of unknown function (DUF3440) 356 389 4.2E-9 T 06-07-2017 IPR021845 Protein of unknown function DUF3440 AM402_RS09440 ddbf9d97dc36ade62052c00d05f00d45 285 Gene3D G3DSA:3.20.10.10 127 279 5.1E-49 T 06-07-2017 AM402_RS09440 ddbf9d97dc36ade62052c00d05f00d45 285 SUPERFAMILY SSF56752 4 279 7.46E-78 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM402_RS09440 ddbf9d97dc36ade62052c00d05f00d45 285 Gene3D G3DSA:3.30.470.10 4 119 4.4E-34 T 06-07-2017 AM402_RS09440 ddbf9d97dc36ade62052c00d05f00d45 285 Pfam PF01063 Amino-transferase class IV 32 256 3.6E-49 T 06-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM402_RS09440 ddbf9d97dc36ade62052c00d05f00d45 285 ProSitePatterns PS00770 Aminotransferases class-IV signature. 181 211 - T 06-07-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM402_RS18585 02a1882782064d3fa6ef905cd57e11f4 229 Pfam PF09339 IclR helix-turn-helix domain 9 59 8.6E-9 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM402_RS18585 02a1882782064d3fa6ef905cd57e11f4 229 SUPERFAMILY SSF46785 7 78 1.13E-12 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS18585 02a1882782064d3fa6ef905cd57e11f4 229 Gene3D G3DSA:3.30.450.40 77 206 5.0E-9 T 06-07-2017 IPR029016 GAF domain-like AM402_RS18585 02a1882782064d3fa6ef905cd57e11f4 229 SMART SM00346 7 97 4.7E-8 T 06-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM402_RS18585 02a1882782064d3fa6ef905cd57e11f4 229 SUPERFAMILY SSF55781 84 208 2.75E-9 T 06-07-2017 IPR029016 GAF domain-like AM402_RS18585 02a1882782064d3fa6ef905cd57e11f4 229 Gene3D G3DSA:1.10.10.10 5 76 1.7E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS17595 76b3832469d115a29cf8657b66f30902 214 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 5.4E-94 T 06-07-2017 IPR021548 Protein of unknown function DUF2895 AM402_RS17595 76b3832469d115a29cf8657b66f30902 214 Pfam PF11444 Protein of unknown function (DUF2895) 6 203 3.1E-91 T 06-07-2017 IPR021548 Protein of unknown function DUF2895 AM402_RS09015 59ab901d48934d719d2e6eb4350a2342 204 SUPERFAMILY SSF47616 78 203 4.64E-38 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AM402_RS09015 59ab901d48934d719d2e6eb4350a2342 204 Gene3D G3DSA:3.40.30.10 1 83 7.3E-27 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS09015 59ab901d48934d719d2e6eb4350a2342 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 197 5.6E-13 T 06-07-2017 IPR004046 Glutathione S-transferase, C-terminal AM402_RS09015 59ab901d48934d719d2e6eb4350a2342 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 83 5.9E-11 T 06-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM402_RS09015 59ab901d48934d719d2e6eb4350a2342 204 SUPERFAMILY SSF52833 1 84 2.02E-21 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS09015 59ab901d48934d719d2e6eb4350a2342 204 Gene3D G3DSA:1.20.1050.10 84 201 1.0E-48 T 06-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AM402_RS21695 e1aa62a8fe13e5fe0d827bc5777a7324 327 Gene3D G3DSA:3.30.420.40 7 183 2.0E-10 T 06-07-2017 AM402_RS21695 e1aa62a8fe13e5fe0d827bc5777a7324 327 SUPERFAMILY SSF53067 171 326 1.01E-15 T 06-07-2017 AM402_RS21695 e1aa62a8fe13e5fe0d827bc5777a7324 327 SUPERFAMILY SSF53067 4 159 1.6E-29 T 06-07-2017 AM402_RS00010 afa5d3164953e0ff824a3216eb510e19 310 Pfam PF09160 FimH, mannose binding 28 177 8.1E-63 T 06-07-2017 IPR015243 FimH, mannose-binding domain AM402_RS00010 afa5d3164953e0ff824a3216eb510e19 310 SUPERFAMILY SSF49401 30 188 1.28E-43 T 06-07-2017 IPR008966 Adhesion domain AM402_RS00010 afa5d3164953e0ff824a3216eb510e19 310 SUPERFAMILY SSF49401 190 310 5.39E-25 T 06-07-2017 IPR008966 Adhesion domain AM402_RS00010 afa5d3164953e0ff824a3216eb510e19 310 Gene3D G3DSA:2.60.40.1090 26 188 5.5E-57 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00010 afa5d3164953e0ff824a3216eb510e19 310 Gene3D G3DSA:2.60.40.1090 189 310 2.1E-31 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00010 afa5d3164953e0ff824a3216eb510e19 310 Pfam PF00419 Fimbrial protein 186 309 6.6E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS05290 a5ada4059f4ac5089b1cd42d95cfb33b 767 Pfam PF08665 PglZ domain 446 566 2.6E-6 T 06-07-2017 IPR013973 PglZ domain AM402_RS12905 41c86aac1e671959ccaff3e7ae3fed26 256 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 7 251 5.4E-100 T 06-07-2017 IPR005226 UPF0014 family AM402_RS12905 41c86aac1e671959ccaff3e7ae3fed26 256 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 2.9E-83 T 06-07-2017 IPR005226 UPF0014 family AM402_RS21000 17a44e820bff044bea17d71a17392b96 68 Gene3D G3DSA:1.20.1280.40 9 59 1.4E-4 T 06-07-2017 IPR007985 Haemolysin expression modulating, HHA AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 10 148 2.9E-35 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 Pfam PF01750 Hydrogenase maturation protease 38 145 9.0E-23 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 PRINTS PR00446 Hydrogen uptake protein signature 21 32 4.3E-8 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 PRINTS PR00446 Hydrogen uptake protein signature 62 72 4.3E-8 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 PRINTS PR00446 Hydrogen uptake protein signature 9 21 4.3E-8 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 PRINTS PR00446 Hydrogen uptake protein signature 73 89 4.3E-8 T 06-07-2017 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 SUPERFAMILY SSF53163 9 148 9.42E-34 T 06-07-2017 IPR023430 Peptidase HybD-like domain AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 Gene3D G3DSA:3.40.50.1450 10 147 1.0E-24 T 06-07-2017 IPR023430 Peptidase HybD-like domain AM402_RS05080 585ec33c41437bf468a4819141381c1f 166 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 10 149 1.6E-51 T 06-07-2017 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 AM402_RS12340 551e41415c89b6b4d0ff70e072e96607 491 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 10 468 7.6E-179 T 06-07-2017 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AM402_RS12340 551e41415c89b6b4d0ff70e072e96607 491 Pfam PF03553 Na+/H+ antiporter family 164 463 6.0E-49 T 06-07-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AM402_RS20880 f1f86a389bce2f313755a144b0513a52 176 Pfam PF10502 Signal peptidase, peptidase S26 75 175 1.4E-14 T 06-07-2017 IPR019533 Peptidase S26 AM402_RS20880 f1f86a389bce2f313755a144b0513a52 176 SUPERFAMILY SSF51306 59 176 3.71E-20 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS20880 f1f86a389bce2f313755a144b0513a52 176 Gene3D G3DSA:2.10.109.10 140 174 6.8E-14 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS20880 f1f86a389bce2f313755a144b0513a52 176 Gene3D G3DSA:2.10.109.10 63 100 6.8E-14 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS07125 a5476c9cbc0057c8734228c3aea2c1cf 296 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 296 2.2E-79 T 06-07-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AM402_RS12410 a750c45005d197814aa0f22c45da4fbe 263 Gene3D G3DSA:1.10.260.40 3 84 4.4E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS12410 a750c45005d197814aa0f22c45da4fbe 263 Pfam PF13560 Helix-turn-helix domain 11 89 1.9E-14 T 06-07-2017 AM402_RS12410 a750c45005d197814aa0f22c45da4fbe 263 SMART SM00530 14 86 8.1E-4 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS05155 f0049be1b7ae14a1be740838c5ee3fa4 514 Gene3D G3DSA:3.40.50.1820 283 511 3.2E-55 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS05155 f0049be1b7ae14a1be740838c5ee3fa4 514 Gene3D G3DSA:2.60.40.10 140 251 9.6E-28 T 06-07-2017 IPR013783 Immunoglobulin-like fold AM402_RS05155 f0049be1b7ae14a1be740838c5ee3fa4 514 Pfam PF11806 Domain of unknown function (DUF3327) 165 263 5.4E-16 T 06-07-2017 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 AM402_RS05155 f0049be1b7ae14a1be740838c5ee3fa4 514 SUPERFAMILY SSF81296 140 265 1.36E-29 T 06-07-2017 IPR014756 Immunoglobulin E-set AM402_RS05155 f0049be1b7ae14a1be740838c5ee3fa4 514 Pfam PF00756 Putative esterase 291 504 2.3E-27 T 06-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 AM402_RS05155 f0049be1b7ae14a1be740838c5ee3fa4 514 SUPERFAMILY SSF53474 279 511 7.14E-37 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS07910 7fd7b082dd2ba6b068e49887f8222970 390 Pfam PF04984 Phage tail sheath protein 93 377 1.7E-49 T 06-07-2017 IPR007067 Tail sheath protein AM402_RS07910 7fd7b082dd2ba6b068e49887f8222970 390 Pfam PF04984 Phage tail sheath protein 1 95 2.0E-12 T 06-07-2017 IPR007067 Tail sheath protein AM402_RS08390 6451ecd74fcdee36fdb49d0704f12cdf 219 SUPERFAMILY SSF89069 13 78 5.1E-20 T 06-07-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM402_RS08390 6451ecd74fcdee36fdb49d0704f12cdf 219 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 145 197 4.7E-17 T 06-07-2017 IPR005573 Anti sigma-E protein RseA, C-terminal AM402_RS08390 6451ecd74fcdee36fdb49d0704f12cdf 219 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 13 98 4.1E-35 T 06-07-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM402_RS04480 e42a6ec8d94ff05427b12d0fd981fe22 295 SUPERFAMILY SSF52540 6 281 7.21E-31 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04480 e42a6ec8d94ff05427b12d0fd981fe22 295 Pfam PF13614 AAA domain 7 155 8.5E-18 T 06-07-2017 IPR025669 AAA domain AM402_RS04480 e42a6ec8d94ff05427b12d0fd981fe22 295 Gene3D G3DSA:3.40.50.300 4 283 4.5E-32 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS09405 705690808262c0b0ff1cca7651076b1a 59 Pfam PF10753 Protein of unknown function (DUF2566) 6 58 1.2E-24 T 06-07-2017 IPR019689 Toxin GhoT/OrtT AM402_RS18955 51f21f90cffb8dc1f2c9730aa072df13 126 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 25 124 1.1E-32 T 06-07-2017 IPR020353 Toxin YafO AM402_RS18955 51f21f90cffb8dc1f2c9730aa072df13 126 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 53 126 3.0E-5 T 06-07-2017 IPR020353 Toxin YafO AM402_RS16645 46f7e66a75a43d37753b28d777bdc0b2 81 Pfam PF07825 Excisionase-like protein 3 50 4.8E-12 T 06-07-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM402_RS16645 46f7e66a75a43d37753b28d777bdc0b2 81 SUPERFAMILY SSF46955 4 65 5.49E-12 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS16645 46f7e66a75a43d37753b28d777bdc0b2 81 Gene3D G3DSA:1.10.1660.20 2 73 4.0E-22 T 06-07-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM402_RS02785 66fbd303992008ad10607d45c536441e 315 Gene3D G3DSA:3.40.1350.10 198 255 0.001 T 06-07-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 AM402_RS02785 66fbd303992008ad10607d45c536441e 315 Pfam PF13020 Domain of unknown function (DUF3883) 196 273 8.0E-11 T 06-07-2017 IPR024975 Domain of unknown function DUF3883 AM402_RS02785 66fbd303992008ad10607d45c536441e 315 Pfam PF11907 Domain of unknown function (DUF3427) 5 132 1.1E-21 T 06-07-2017 IPR021835 Protein of unknown function DUF3427 AM402_RS17815 39e884e7ed3b61697b04fbcc2f41fc00 264 Pfam PF11920 Protein of unknown function (DUF3438) 9 260 4.6E-95 T 06-07-2017 IPR021844 Integrating conjugative element protein, PFL4704 AM402_RS17815 39e884e7ed3b61697b04fbcc2f41fc00 264 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 12 254 2.7E-91 T 06-07-2017 IPR021844 Integrating conjugative element protein, PFL4704 AM402_RS20890 d2dbdd5638cfa05b868daa91f6147b96 815 Pfam PF12846 AAA-like domain 449 707 6.8E-18 T 06-07-2017 AM402_RS20890 d2dbdd5638cfa05b868daa91f6147b96 815 Gene3D G3DSA:3.40.50.300 604 729 4.0E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20890 d2dbdd5638cfa05b868daa91f6147b96 815 Gene3D G3DSA:3.40.50.300 446 523 4.0E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20890 d2dbdd5638cfa05b868daa91f6147b96 815 SUPERFAMILY SSF52540 403 734 9.25E-42 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20890 d2dbdd5638cfa05b868daa91f6147b96 815 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 24 809 6.9E-205 T 06-07-2017 IPR014117 Type-IV secretion system protein TraC AM402_RS20890 d2dbdd5638cfa05b868daa91f6147b96 815 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 21 255 2.0E-59 T 06-07-2017 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM402_RS19500 7a0ac685cb139795c5ac63d195165d55 417 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 2.0E-10 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS19500 7a0ac685cb139795c5ac63d195165d55 417 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 2.0E-10 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS19500 7a0ac685cb139795c5ac63d195165d55 417 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 2.0E-10 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS19500 7a0ac685cb139795c5ac63d195165d55 417 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 2.0E-10 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS19500 7a0ac685cb139795c5ac63d195165d55 417 Gene3D G3DSA:1.10.3860.10 9 403 7.6E-83 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS19500 7a0ac685cb139795c5ac63d195165d55 417 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 35.853 T 06-07-2017 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AM402_RS19500 7a0ac685cb139795c5ac63d195165d55 417 SUPERFAMILY SSF118215 17 399 7.98E-95 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS19500 7a0ac685cb139795c5ac63d195165d55 417 Pfam PF00375 Sodium:dicarboxylate symporter family 17 398 1.0E-64 T 06-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 3.9E-14 T 06-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 Pfam PF00384 Molybdopterin oxidoreductase 2 442 1.7E-23 T 06-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 Gene3D G3DSA:2.40.40.20 604 803 8.5E-49 T 06-07-2017 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 Gene3D G3DSA:3.40.228.10 1 108 1.5E-70 T 06-07-2017 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 Gene3D G3DSA:3.40.228.10 152 261 1.5E-70 T 06-07-2017 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 06-07-2017 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 Gene3D G3DSA:3.40.50.740 320 470 4.5E-59 T 06-07-2017 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 SUPERFAMILY SSF50692 674 803 1.63E-42 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 SUPERFAMILY SSF50692 617 647 1.63E-42 T 06-07-2017 IPR009010 Aspartate decarboxylase-like domain AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 06-07-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM402_RS02000 9bf67489e11a25aa33f37a59c4bd62aa 803 SUPERFAMILY SSF53706 1 638 1.44E-232 T 06-07-2017 AM402_RS18140 6d8e99b671414dffdf6274abc811fe1a 161 Pfam PF00419 Fimbrial protein 31 161 6.3E-12 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18140 6d8e99b671414dffdf6274abc811fe1a 161 SUPERFAMILY SSF49401 35 161 4.47E-17 T 06-07-2017 IPR008966 Adhesion domain AM402_RS16530 9ed8e6c843602049dd2ed9141fe00d63 210 Pfam PF06323 Phage antitermination protein Q 2 207 1.3E-62 T 06-07-2017 IPR010455 Bacteriophage 82, GpQ AM402_RS16530 9ed8e6c843602049dd2ed9141fe00d63 210 ProDom PD038144 ANTITERMINATOR Q PROPHAGE TRANSCRIPTION ANTITERMINATION CP-933P GIFSY-1 ENCODED BY Q-LIKE 3 207 4.0E-24 T 06-07-2017 IPR010455 Bacteriophage 82, GpQ AM402_RS03670 5679bcb4343524de0390b18d10ce159c 165 SUPERFAMILY SSF160369 4 162 8.24E-50 T 06-07-2017 AM402_RS03670 5679bcb4343524de0390b18d10ce159c 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 06-07-2017 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS03670 5679bcb4343524de0390b18d10ce159c 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 27.112 T 06-07-2017 IPR022973 Ribosomal protein L10 AM402_RS03670 5679bcb4343524de0390b18d10ce159c 165 Pfam PF00466 Ribosomal protein L10 5 101 5.6E-27 T 06-07-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AM402_RS18055 00b816052e75a7a327f454c8f3f234af 294 SUPERFAMILY SSF47413 8 75 1.13E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18055 00b816052e75a7a327f454c8f3f234af 294 SMART SM00530 17 71 9.1E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS18055 00b816052e75a7a327f454c8f3f234af 294 Pfam PF13560 Helix-turn-helix domain 14 68 2.5E-11 T 06-07-2017 AM402_RS18055 00b816052e75a7a327f454c8f3f234af 294 Gene3D G3DSA:1.10.260.40 14 75 6.8E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06880 865516e0d3ee83ce8aa829fd36481991 70 SUPERFAMILY SSF55174 7 64 7.33E-18 T 06-07-2017 AM402_RS06880 865516e0d3ee83ce8aa829fd36481991 70 Pfam PF13275 S4 domain 5 68 1.0E-22 T 06-07-2017 AM402_RS06880 865516e0d3ee83ce8aa829fd36481991 70 Gene3D G3DSA:3.10.290.10 3 68 7.9E-25 T 06-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AM402_RS14715 5f0dcfcd7931769aa8e5951c80ed12c9 500 Pfam PF06381 Protein of unknown function (DUF1073) 86 431 2.0E-89 T 06-07-2017 IPR024459 Protein of unknown function DUF1073 AM402_RS12255 33aed952f3f60fdd6730e54564ea2fa4 118 Pfam PF06932 Protein of unknown function (DUF1283) 35 118 2.7E-38 T 06-07-2017 IPR009700 Protein of unknown function DUF1283 AM402_RS12255 33aed952f3f60fdd6730e54564ea2fa4 118 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 34 118 3.0E-27 T 06-07-2017 IPR009700 Protein of unknown function DUF1283 AM402_RS13060 cc5a9d5eb91975d42c91e29aff4850dd 132 Pfam PF01124 MAPEG family 4 120 5.0E-26 T 06-07-2017 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AM402_RS13060 cc5a9d5eb91975d42c91e29aff4850dd 132 Gene3D G3DSA:1.20.120.550 4 125 3.9E-21 T 06-07-2017 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AM402_RS13060 cc5a9d5eb91975d42c91e29aff4850dd 132 SUPERFAMILY SSF161084 4 126 8.63E-29 T 06-07-2017 AM402_RS00315 95e374ea11e85bed6932274cbccf84f5 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 06-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM402_RS00315 95e374ea11e85bed6932274cbccf84f5 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 06-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM402_RS00315 95e374ea11e85bed6932274cbccf84f5 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 8.5E-173 T 06-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM402_RS00315 95e374ea11e85bed6932274cbccf84f5 482 Gene3D G3DSA:3.40.605.10 12 267 8.3E-103 T 06-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM402_RS00315 95e374ea11e85bed6932274cbccf84f5 482 SUPERFAMILY SSF53720 8 481 8.38E-171 T 06-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM402_RS00315 95e374ea11e85bed6932274cbccf84f5 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 4.8E-212 T 06-07-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AM402_RS00315 95e374ea11e85bed6932274cbccf84f5 482 Gene3D G3DSA:3.40.309.10 268 453 4.2E-71 T 06-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AM402_RS19050 76a842049e2d9ff581897877bce04167 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 103 3.5E-33 T 06-07-2017 IPR003849 Preprotein translocase YajC AM402_RS19050 76a842049e2d9ff581897877bce04167 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 2.0E-16 T 06-07-2017 IPR003849 Preprotein translocase YajC AM402_RS19050 76a842049e2d9ff581897877bce04167 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 2.0E-16 T 06-07-2017 IPR003849 Preprotein translocase YajC AM402_RS19050 76a842049e2d9ff581897877bce04167 111 Pfam PF02699 Preprotein translocase subunit 22 100 1.0E-27 T 06-07-2017 IPR003849 Preprotein translocase YajC AM402_RS19050 76a842049e2d9ff581897877bce04167 111 SMART SM01323 19 103 6.2E-39 T 06-07-2017 IPR003849 Preprotein translocase YajC AM402_RS12405 61f795089035aacf990ddc5b1c1044c2 468 Gene3D G3DSA:1.20.1250.20 266 460 1.4E-15 T 06-07-2017 AM402_RS12405 61f795089035aacf990ddc5b1c1044c2 468 SUPERFAMILY SSF103473 2 186 3.53E-34 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS12405 61f795089035aacf990ddc5b1c1044c2 468 Pfam PF07690 Major Facilitator Superfamily 12 412 1.1E-38 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS12405 61f795089035aacf990ddc5b1c1044c2 468 SUPERFAMILY SSF103473 201 463 5.1E-24 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS12405 61f795089035aacf990ddc5b1c1044c2 468 Gene3D G3DSA:1.20.1250.20 8 196 7.8E-23 T 06-07-2017 AM402_RS10650 82888b82d0a73b6b27678e9c6e29c25e 343 SUPERFAMILY SSF51556 3 42 1.28E-73 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS10650 82888b82d0a73b6b27678e9c6e29c25e 343 SUPERFAMILY SSF51556 69 343 1.28E-73 T 06-07-2017 IPR032466 Metal-dependent hydrolase AM402_RS10650 82888b82d0a73b6b27678e9c6e29c25e 343 Pfam PF02126 Phosphotriesterase family 13 342 8.4E-54 T 06-07-2017 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 AM402_RS10650 82888b82d0a73b6b27678e9c6e29c25e 343 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 18 26 - T 06-07-2017 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 AM402_RS10650 82888b82d0a73b6b27678e9c6e29c25e 343 Gene3D G3DSA:3.20.20.140 4 343 1.3E-101 T 06-07-2017 AM402_RS00155 6c181f168d27b7d6ee11e172acf4637e 114 Pfam PF03840 Preprotein translocase SecG subunit 5 72 1.9E-21 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM402_RS00155 6c181f168d27b7d6ee11e172acf4637e 114 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 4.8E-39 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM402_RS00155 6c181f168d27b7d6ee11e172acf4637e 114 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 4.8E-39 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM402_RS00155 6c181f168d27b7d6ee11e172acf4637e 114 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 4.8E-39 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM402_RS00155 6c181f168d27b7d6ee11e172acf4637e 114 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 4.8E-39 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM402_RS00155 6c181f168d27b7d6ee11e172acf4637e 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 73 1.2E-26 T 06-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM402_RS20770 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 194 208 5.3E-5 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS20770 4225e7fa9345953ea456e809caf3ccb5 260 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 106 124 5.3E-5 T 06-07-2017 IPR001270 ClpA/B family GO:0005524 AM402_RS20770 4225e7fa9345953ea456e809caf3ccb5 260 SUPERFAMILY SSF52540 71 255 7.63E-26 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20770 4225e7fa9345953ea456e809caf3ccb5 260 SMART SM00382 102 236 8.9E-11 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS20770 4225e7fa9345953ea456e809caf3ccb5 260 Gene3D G3DSA:3.40.50.300 71 235 1.8E-27 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS20770 4225e7fa9345953ea456e809caf3ccb5 260 Pfam PF01695 IstB-like ATP binding protein 57 236 6.9E-72 T 06-07-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 AM402_RS20770 4225e7fa9345953ea456e809caf3ccb5 260 PIRSF PIRSF003073 2 258 6.8E-93 T 06-07-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AM402_RS06175 f26d7f50aa544cb5f9365590629acc04 365 Gene3D G3DSA:3.40.50.150 184 279 6.3E-16 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS06175 f26d7f50aa544cb5f9365590629acc04 365 PIRSF PIRSF028774 1 360 3.7E-185 T 06-07-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM402_RS06175 f26d7f50aa544cb5f9365590629acc04 365 SUPERFAMILY SSF53335 184 279 1.2E-13 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS06175 f26d7f50aa544cb5f9365590629acc04 365 Pfam PF01728 FtsJ-like methyltransferase 186 279 1.0E-8 T 06-07-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM402_RS06175 f26d7f50aa544cb5f9365590629acc04 365 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 84.082 T 06-07-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM402_RS07790 791022783b11fed22b1cf96e53c77a96 73 SUPERFAMILY SSF57716 35 71 9.27E-7 T 06-07-2017 AM402_RS07790 791022783b11fed22b1cf96e53c77a96 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 64 2.3E-10 T 06-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM402_RS21570 44363820a0488edba4c0f177ea74fbfc 158 Pfam PF00565 Staphylococcal nuclease homologue 48 142 1.0E-27 T 06-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM402_RS21570 44363820a0488edba4c0f177ea74fbfc 158 Gene3D G3DSA:2.40.50.90 11 143 2.1E-33 T 06-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM402_RS21570 44363820a0488edba4c0f177ea74fbfc 158 SMART SM00318 11 143 5.6E-37 T 06-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM402_RS21570 44363820a0488edba4c0f177ea74fbfc 158 SUPERFAMILY SSF50199 8 144 4.71E-38 T 06-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM402_RS13575 579514625846a31cb259bfdddbd18ef1 127 Pfam PF06530 Phage antitermination protein Q 3 110 1.1E-15 T 06-07-2017 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 AM402_RS13570 0a7c04003315824a87444bcfa3984bfe 287 Pfam PF00561 alpha/beta hydrolase fold 6 120 5.1E-14 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AM402_RS13570 0a7c04003315824a87444bcfa3984bfe 287 Gene3D G3DSA:3.40.50.1820 2 286 5.0E-49 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS13570 0a7c04003315824a87444bcfa3984bfe 287 SUPERFAMILY SSF53474 2 259 4.77E-39 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS11375 f3a796852d22e58e2c1a87b77f6cc42f 107 Pfam PF10765 Protein of unknown function (DUF2591) 3 101 2.1E-25 T 06-07-2017 IPR019701 Bacteriophage P22, NinX AM402_RS07915 e29be20ab09684fe1cfd3e3184c1a604 171 Pfam PF04985 Phage tail tube protein FII 4 170 1.3E-67 T 06-07-2017 IPR006498 Tail tube protein AM402_RS07915 e29be20ab09684fe1cfd3e3184c1a604 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 2.3E-55 T 06-07-2017 IPR006498 Tail tube protein AM402_RS16510 69816ecac0b48376fc88ce6e62e127f6 156 Gene3D G3DSA:1.10.530.40 17 155 7.2E-57 T 06-07-2017 IPR023347 Lysozyme domain GO:0003796 AM402_RS16510 69816ecac0b48376fc88ce6e62e127f6 156 SUPERFAMILY SSF53955 7 155 1.94E-56 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS16510 69816ecac0b48376fc88ce6e62e127f6 156 Pfam PF00959 Phage lysozyme 41 146 1.5E-25 T 06-07-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AM402_RS14610 a7c1633b431042c33ea2103953a871a0 218 Pfam PF11041 Protein of unknown function (DUF2612) 13 194 7.1E-54 T 06-07-2017 IPR021283 Protein of unknown function DUF2612 AM402_RS01285 668d3a711238d4789d493c804678a2b1 248 SUPERFAMILY SSF52343 104 248 1.7E-37 T 06-07-2017 AM402_RS01285 668d3a711238d4789d493c804678a2b1 248 Gene3D G3DSA:3.40.50.80 97 248 4.0E-46 T 06-07-2017 AM402_RS01285 668d3a711238d4789d493c804678a2b1 248 SUPERFAMILY SSF63380 3 98 1.27E-23 T 06-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM402_RS01285 668d3a711238d4789d493c804678a2b1 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 2.4E-17 T 06-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM402_RS01285 668d3a711238d4789d493c804678a2b1 248 Gene3D G3DSA:2.40.30.10 2 96 3.7E-28 T 06-07-2017 AM402_RS01285 668d3a711238d4789d493c804678a2b1 248 Pfam PF00970 Oxidoreductase FAD-binding domain 29 89 1.0E-6 T 06-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM402_RS19250 0e09cdf387f60e85eba0b21b2965c888 337 Gene3D G3DSA:3.30.70.20 126 179 3.2E-18 T 06-07-2017 AM402_RS19250 0e09cdf387f60e85eba0b21b2965c888 337 Gene3D G3DSA:3.30.70.20 180 239 4.7E-29 T 06-07-2017 AM402_RS19250 0e09cdf387f60e85eba0b21b2965c888 337 Gene3D G3DSA:3.30.70.20 38 125 4.7E-29 T 06-07-2017 AM402_RS19250 0e09cdf387f60e85eba0b21b2965c888 337 Pfam PF13247 4Fe-4S dicluster domain 111 213 2.2E-23 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS19250 0e09cdf387f60e85eba0b21b2965c888 337 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 151 162 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS19250 0e09cdf387f60e85eba0b21b2965c888 337 SUPERFAMILY SSF54862 38 329 7.12E-68 T 06-07-2017 AM402_RS20200 dbf524577a26b36651f618c85a3ca263 265 Pfam PF01925 Sulfite exporter TauE/SafE 7 259 1.7E-31 T 06-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 AM402_RS01760 5f23372b3d43091be28a9408821aec1a 422 Pfam PF04932 O-Antigen ligase 196 341 3.4E-14 T 06-07-2017 IPR007016 O-antigen ligase-related AM402_RS19100 21af1f6fe83589d8d1df660d955617a2 265 SUPERFAMILY SSF81342 68 263 3.3E-25 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM402_RS19100 21af1f6fe83589d8d1df660d955617a2 265 Pfam PF01292 Prokaryotic cytochrome b561 73 261 1.3E-27 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM402_RS19100 21af1f6fe83589d8d1df660d955617a2 265 Gene3D G3DSA:1.20.950.20 65 262 8.6E-33 T 06-07-2017 AM402_RS08175 298622581a8631ce25ca574ab7d447fc 239 Pfam PF02754 Cysteine-rich domain 3 85 1.9E-12 T 06-07-2017 IPR004017 Cysteine-rich domain AM402_RS08175 298622581a8631ce25ca574ab7d447fc 239 Pfam PF02754 Cysteine-rich domain 133 216 5.2E-14 T 06-07-2017 IPR004017 Cysteine-rich domain AM402_RS17360 2963a5eeaf80bbfd41c67f29c9172d85 316 Gene3D G3DSA:3.40.50.1980 167 316 1.5E-23 T 06-07-2017 AM402_RS17360 2963a5eeaf80bbfd41c67f29c9172d85 316 Gene3D G3DSA:3.40.50.1980 40 166 9.3E-29 T 06-07-2017 AM402_RS17360 2963a5eeaf80bbfd41c67f29c9172d85 316 Pfam PF01497 Periplasmic binding protein 68 293 5.9E-31 T 06-07-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM402_RS17360 2963a5eeaf80bbfd41c67f29c9172d85 316 SUPERFAMILY SSF53807 39 302 1.92E-56 T 06-07-2017 AM402_RS15545 8ab951e9c0aecb04531bde76c51c0ba0 104 SUPERFAMILY SSF54736 21 103 8.89E-32 T 06-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM402_RS15545 8ab951e9c0aecb04531bde76c51c0ba0 104 Gene3D G3DSA:3.30.1390.10 9 104 9.1E-43 T 06-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM402_RS15545 8ab951e9c0aecb04531bde76c51c0ba0 104 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 22 100 3.4E-35 T 06-07-2017 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AM402_RS15545 8ab951e9c0aecb04531bde76c51c0ba0 104 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 99 28.619 T 06-07-2017 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AM402_RS14155 51cb0124d742672886701a08443a04c5 341 Pfam PF06147 Protein of unknown function (DUF968) 138 338 1.2E-73 T 06-07-2017 IPR010373 Protein of unknown function DUF968 AM402_RS07095 76b92d05b335dc1f26e31e8a90d6d3c2 411 Gene3D G3DSA:3.20.20.70 17 357 1.7E-41 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS07095 76b92d05b335dc1f26e31e8a90d6d3c2 411 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 282 371 2.3E-17 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain AM402_RS07095 76b92d05b335dc1f26e31e8a90d6d3c2 411 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 173 392 4.0E-13 T 06-07-2017 AM402_RS07095 76b92d05b335dc1f26e31e8a90d6d3c2 411 Pfam PF13186 Iron-sulfur cluster-binding domain 283 343 9.8E-9 T 06-07-2017 IPR023885 4Fe4S-binding SPASM domain AM402_RS07095 76b92d05b335dc1f26e31e8a90d6d3c2 411 Pfam PF04055 Radical SAM superfamily 18 188 5.3E-11 T 06-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AM402_RS07095 76b92d05b335dc1f26e31e8a90d6d3c2 411 SUPERFAMILY SSF102114 17 352 1.83E-35 T 06-07-2017 AM402_RS07095 76b92d05b335dc1f26e31e8a90d6d3c2 411 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 10 390 9.0E-152 T 06-07-2017 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 AM402_RS21310 a51ebcff7fba98ec9c021721c2d6d6d3 316 PIRSF PIRSF037112 28 316 4.7E-119 T 06-07-2017 IPR017113 Antirestriction, ArdC AM402_RS21310 a51ebcff7fba98ec9c021721c2d6d6d3 316 Pfam PF08401 Domain of unknown function (DUF1738) 41 155 7.4E-39 T 06-07-2017 IPR013610 Domain of unknown function DUF1738 AM402_RS11920 88491b8ec90268062354b11e30d0a22a 178 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 170 178 - T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS11920 88491b8ec90268062354b11e30d0a22a 178 Pfam PF13505 Outer membrane protein beta-barrel domain 9 178 1.0E-24 T 06-07-2017 IPR027385 Outer membrane protein beta-barrel AM402_RS11920 88491b8ec90268062354b11e30d0a22a 178 SUPERFAMILY SSF56925 29 178 1.23E-25 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS11920 88491b8ec90268062354b11e30d0a22a 178 Gene3D G3DSA:2.40.160.20 28 178 3.5E-36 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS11920 88491b8ec90268062354b11e30d0a22a 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 166 177 1.5E-29 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS11920 88491b8ec90268062354b11e30d0a22a 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 139 160 1.5E-29 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS11920 88491b8ec90268062354b11e30d0a22a 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 93 116 1.5E-29 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS11920 88491b8ec90268062354b11e30d0a22a 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 50 62 1.5E-29 T 06-07-2017 IPR000758 Virulence-related outer membrane protein GO:0009279 AM402_RS05515 47d62228c97654578b4b75824cea16ff 314 TIGRFAM TIGR02740 TraF-like: TraF-like protein 10 270 1.5E-110 T 06-07-2017 IPR014111 Type IV conjugative transfer system protein TraF AM402_RS05515 47d62228c97654578b4b75824cea16ff 314 Pfam PF13728 F plasmid transfer operon protein 41 260 4.9E-77 T 06-07-2017 AM402_RS05515 47d62228c97654578b4b75824cea16ff 314 Gene3D G3DSA:3.40.30.10 164 257 1.2E-9 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS05515 47d62228c97654578b4b75824cea16ff 314 SUPERFAMILY SSF52833 156 259 1.74E-12 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 SUPERFAMILY SSF49503 36 170 2.17E-32 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 ProSitePatterns PS00080 Multicopper oxidases signature 2. 507 518 - T 06-07-2017 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 Gene3D G3DSA:2.60.40.420 172 291 1.6E-31 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 Gene3D G3DSA:2.60.40.420 34 171 3.6E-36 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 SUPERFAMILY SSF49503 174 294 6.34E-33 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 Pfam PF00394 Multicopper oxidase 226 299 5.8E-7 T 06-07-2017 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 SUPERFAMILY SSF49503 407 524 1.02E-25 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 Pfam PF07731 Multicopper oxidase 416 525 6.5E-22 T 06-07-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 Gene3D G3DSA:2.60.40.420 415 524 2.1E-28 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18645 92eb4eebec11de144c8f46579f3d3a3c 526 Pfam PF07732 Multicopper oxidase 55 168 2.3E-30 T 06-07-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 SUPERFAMILY SSF51905 255 420 1.91E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 SUPERFAMILY SSF51905 1 74 1.91E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 SUPERFAMILY SSF51905 133 200 1.91E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 Pfam PF00890 FAD binding domain 4 405 1.7E-55 T 06-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 Gene3D G3DSA:3.50.50.60 260 420 3.3E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 Gene3D G3DSA:3.50.50.60 1 53 3.3E-26 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 418 3.7E-165 T 06-07-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 421 46.173 T 06-07-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM402_RS20060 fd5cc6d13db1bd51befc36170ad5bea6 435 PIRSF PIRSF000141 1 424 8.8E-162 T 06-07-2017 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 AM402_RS17835 8de78885e4a72620045a57391784784a 78 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 1.6E-23 T 06-07-2017 IPR021676 Protein of unknown function DUF3262 AM402_RS17835 8de78885e4a72620045a57391784784a 78 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 3.6E-24 T 06-07-2017 IPR021676 Protein of unknown function DUF3262 AM402_RS14075 6152f03cc6e9b6e9d8ec7b7843ea4db0 443 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 43 387 3.6E-78 T 06-07-2017 IPR006427 Phage portal protein, HK97 AM402_RS14075 6152f03cc6e9b6e9d8ec7b7843ea4db0 443 Pfam PF04860 Phage portal protein 52 381 3.6E-95 T 06-07-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein AM402_RS09115 4b4f5d894f0505e426faae0426a92f1f 150 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 29 125 6.2E-32 T 06-07-2017 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09115 4b4f5d894f0505e426faae0426a92f1f 150 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 20.222 T 06-07-2017 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AM402_RS10730 c94324d23d4d23e7eb6176b5b39c7216 110 Pfam PF00893 Small Multidrug Resistance protein 5 94 4.0E-28 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 AM402_RS10730 c94324d23d4d23e7eb6176b5b39c7216 110 SUPERFAMILY SSF103481 6 106 2.09E-20 T 06-07-2017 AM402_RS13615 5804996a913d090e78553140605a23cb 331 PIRSF PIRSF037004 11 331 7.4E-126 T 06-07-2017 IPR017087 Uncharacterised conserved protein UCP037004 AM402_RS13615 5804996a913d090e78553140605a23cb 331 Pfam PF04463 Protein of unknown function (DUF523) 20 162 6.9E-34 T 06-07-2017 IPR007553 Domain of unknown function DUF523 AM402_RS13615 5804996a913d090e78553140605a23cb 331 Pfam PF08349 Protein of unknown function (DUF1722) 205 322 2.5E-42 T 06-07-2017 IPR013560 Domain of unknown function DUF1722 AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 2.5E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 2.5E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 2.5E-11 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 SUPERFAMILY SSF46955 12 134 1.06E-29 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 SMART SM00422 12 80 1.5E-23 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 Pfam PF09278 MerR, DNA binding 54 119 1.6E-13 T 06-07-2017 IPR015358 Transcription regulator MerR, DNA binding AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 149 2.4E-58 T 06-07-2017 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 Gene3D G3DSA:1.10.1660.10 67 143 9.1E-14 T 06-07-2017 AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 Pfam PF00376 MerR family regulatory protein 13 49 1.7E-15 T 06-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM402_RS04105 6816ebc3eb5cedc7d166ff3bb43cfe4d 149 Gene3D G3DSA:1.10.1660.10 11 66 4.6E-22 T 06-07-2017 AM402_RS03330 718b37197ae36bad7833a00709a8c5d0 128 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 125 1.3E-31 T 06-07-2017 IPR009387 Toxin HigB-2 AM402_RS03330 718b37197ae36bad7833a00709a8c5d0 128 PIRSF PIRSF018634 1 128 1.1E-34 T 06-07-2017 IPR009387 Toxin HigB-2 AM402_RS08830 db40d270a6f58c6b95fc78ed16397b6e 255 Pfam PF01292 Prokaryotic cytochrome b561 60 240 4.5E-22 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM402_RS08830 db40d270a6f58c6b95fc78ed16397b6e 255 SUPERFAMILY SSF81342 55 245 5.49E-25 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM402_RS08830 db40d270a6f58c6b95fc78ed16397b6e 255 Gene3D G3DSA:1.20.950.20 53 245 3.0E-33 T 06-07-2017 AM402_RS07765 d200fdd7ce5e12f6780775bd02086b3e 91 Pfam PF10743 Regulatory phage protein cox 4 86 5.4E-38 T 06-07-2017 IPR019679 Bacteriophage P2, regulatory protein Cox AM402_RS00950 c9f78918783173d5e54e368111dcda24 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 5.5E-39 T 06-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00950 c9f78918783173d5e54e368111dcda24 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 06-07-2017 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00950 c9f78918783173d5e54e368111dcda24 104 SUPERFAMILY SSF50104 4 100 8.42E-33 T 06-07-2017 IPR008991 Translation protein SH3-like domain AM402_RS00950 c9f78918783173d5e54e368111dcda24 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 9.2E-24 T 06-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00950 c9f78918783173d5e54e368111dcda24 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.099 T 06-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM402_RS00950 c9f78918783173d5e54e368111dcda24 104 Gene3D G3DSA:2.30.30.30 3 92 5.5E-22 T 06-07-2017 IPR014722 Ribosomal protein L2 domain 2 AM402_RS13445 ec3d9763ad4c35ed802220dbdd630866 285 Gene3D G3DSA:1.10.3470.10 56 266 8.9E-10 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS13445 ec3d9763ad4c35ed802220dbdd630866 285 Pfam PF00950 ABC 3 transport family 13 268 3.0E-90 T 06-07-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM402_RS13445 ec3d9763ad4c35ed802220dbdd630866 285 SUPERFAMILY SSF81345 5 266 1.02E-46 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS18225 6d3501605090d41643d6eb3278ba069a 221 SUPERFAMILY SSF58113 44 216 3.66E-14 T 06-07-2017 AM402_RS18225 6d3501605090d41643d6eb3278ba069a 221 Gene3D G3DSA:1.20.120.20 147 218 9.8E-4 T 06-07-2017 AM402_RS18225 6d3501605090d41643d6eb3278ba069a 221 Gene3D G3DSA:1.20.120.20 47 146 2.9E-8 T 06-07-2017 AM402_RS07875 5c372cf327128222e37d00300aaf6fa1 212 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 130 204 2.1E-11 T 06-07-2017 IPR006522 Phage virion morphogensis protein AM402_RS07875 5c372cf327128222e37d00300aaf6fa1 212 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 5 82 5.5E-13 T 06-07-2017 IPR006522 Phage virion morphogensis protein AM402_RS07875 5c372cf327128222e37d00300aaf6fa1 212 Pfam PF05069 Phage virion morphogenesis family 5 64 1.8E-11 T 06-07-2017 IPR006522 Phage virion morphogensis protein AM402_RS07875 5c372cf327128222e37d00300aaf6fa1 212 Pfam PF05069 Phage virion morphogenesis family 125 209 2.5E-15 T 06-07-2017 IPR006522 Phage virion morphogensis protein AM402_RS07940 41df1d89e1c33fd92b58a5e275661f03 365 SUPERFAMILY SSF69279 13 185 1.36E-26 T 06-07-2017 AM402_RS07940 41df1d89e1c33fd92b58a5e275661f03 365 Pfam PF05954 Phage late control gene D protein (GPD) 42 345 2.5E-31 T 06-07-2017 AM402_RS09205 c92af94d6631ef7af73e49f7d3df1b86 255 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 11 252 32.751 T 06-07-2017 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AM402_RS09205 c92af94d6631ef7af73e49f7d3df1b86 255 Pfam PF12697 Alpha/beta hydrolase family 17 245 1.6E-14 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AM402_RS09205 c92af94d6631ef7af73e49f7d3df1b86 255 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 14 251 3.9E-80 T 06-07-2017 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AM402_RS09205 c92af94d6631ef7af73e49f7d3df1b86 255 SUPERFAMILY SSF53474 3 251 7.36E-40 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS09205 c92af94d6631ef7af73e49f7d3df1b86 255 Gene3D G3DSA:3.40.50.1820 7 251 4.9E-51 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS14410 d51c52c413d9d2c2eedf41fbe73b3000 345 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 141.309 T 06-07-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM402_RS14410 d51c52c413d9d2c2eedf41fbe73b3000 345 Gene3D G3DSA:3.40.718.10 3 340 1.3E-133 T 06-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM402_RS14410 d51c52c413d9d2c2eedf41fbe73b3000 345 PIRSF PIRSF002465 2 345 1.6E-126 T 06-07-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM402_RS14410 d51c52c413d9d2c2eedf41fbe73b3000 345 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 343 3.2E-130 T 06-07-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM402_RS14410 d51c52c413d9d2c2eedf41fbe73b3000 345 SUPERFAMILY SSF53659 4 341 6.58E-104 T 06-07-2017 AM402_RS14410 d51c52c413d9d2c2eedf41fbe73b3000 345 Pfam PF02504 Fatty acid synthesis protein 5 332 7.3E-116 T 06-07-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AM402_RS19725 eccaf5bae3690cb1223450124c17e406 270 SMART SM00382 33 229 1.7E-12 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS19725 eccaf5bae3690cb1223450124c17e406 270 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS19725 eccaf5bae3690cb1223450124c17e406 270 Gene3D G3DSA:3.40.50.300 6 239 7.9E-67 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19725 eccaf5bae3690cb1223450124c17e406 270 SUPERFAMILY SSF52540 8 240 1.27E-62 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS19725 eccaf5bae3690cb1223450124c17e406 270 Pfam PF00005 ABC transporter 25 172 8.7E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS12390 09c2fa5a0f0a71c76e707e3fceedbc7e 346 Gene3D G3DSA:2.40.50.100 47 80 1.9E-16 T 06-07-2017 AM402_RS12390 09c2fa5a0f0a71c76e707e3fceedbc7e 346 Gene3D G3DSA:2.40.50.100 207 240 1.9E-16 T 06-07-2017 AM402_RS12390 09c2fa5a0f0a71c76e707e3fceedbc7e 346 SUPERFAMILY SSF56954 83 183 6.67E-7 T 06-07-2017 AM402_RS12390 09c2fa5a0f0a71c76e707e3fceedbc7e 346 SUPERFAMILY SSF111369 46 107 1.7E-9 T 06-07-2017 AM402_RS12390 09c2fa5a0f0a71c76e707e3fceedbc7e 346 Pfam PF13533 Biotin-lipoyl like 48 95 1.2E-17 T 06-07-2017 AM402_RS12390 09c2fa5a0f0a71c76e707e3fceedbc7e 346 SUPERFAMILY SSF111369 172 259 2.75E-6 T 06-07-2017 AM402_RS12390 09c2fa5a0f0a71c76e707e3fceedbc7e 346 Pfam PF13437 HlyD family secretion protein 210 288 1.0E-9 T 06-07-2017 AM402_RS15625 b05f3b6aa44c1a36af7c968f21dd3b1c 203 SUPERFAMILY SSF48317 26 201 5.1E-32 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS15625 b05f3b6aa44c1a36af7c968f21dd3b1c 203 Gene3D G3DSA:1.20.144.10 3 173 4.6E-22 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS15625 b05f3b6aa44c1a36af7c968f21dd3b1c 203 SMART SM00014 61 170 1.2E-19 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS15625 b05f3b6aa44c1a36af7c968f21dd3b1c 203 Pfam PF01569 PAP2 superfamily 62 169 2.2E-13 T 06-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM402_RS04300 4ab0e5c0282f16926deabc3e41ce7918 383 Pfam PF13265 Protein of unknown function (DUF4056) 49 309 3.2E-133 T 06-07-2017 IPR025130 Protein of unknown function DUF4056 AM402_RS08270 5b78618e8c9222f55c3bdbf5bb03492c 534 Gene3D G3DSA:3.40.50.150 158 370 1.0E-33 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS08270 5b78618e8c9222f55c3bdbf5bb03492c 534 Pfam PF02384 N-6 DNA Methylase 157 494 2.4E-111 T 06-07-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM402_RS08270 5b78618e8c9222f55c3bdbf5bb03492c 534 Pfam PF12161 HsdM N-terminal domain 14 142 1.6E-20 T 06-07-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AM402_RS08270 5b78618e8c9222f55c3bdbf5bb03492c 534 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 180 196 1.7E-20 T 06-07-2017 AM402_RS08270 5b78618e8c9222f55c3bdbf5bb03492c 534 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 277 289 1.7E-20 T 06-07-2017 AM402_RS08270 5b78618e8c9222f55c3bdbf5bb03492c 534 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 203 217 1.7E-20 T 06-07-2017 AM402_RS08270 5b78618e8c9222f55c3bdbf5bb03492c 534 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 313 337 1.7E-20 T 06-07-2017 AM402_RS08270 5b78618e8c9222f55c3bdbf5bb03492c 534 SUPERFAMILY SSF53335 13 533 3.66E-135 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS08155 b12549c2b8656cfb2b3c3aa979bad8f2 114 SUPERFAMILY SSF103481 17 112 4.05E-5 T 06-07-2017 AM402_RS08155 b12549c2b8656cfb2b3c3aa979bad8f2 114 PIRSF PIRSF021239 1 113 7.2E-48 T 06-07-2017 IPR007437 Putative member of DMT superfamily AM402_RS08155 b12549c2b8656cfb2b3c3aa979bad8f2 114 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 110 6.1E-45 T 06-07-2017 IPR007437 Putative member of DMT superfamily AM402_RS14495 2a784389316b5a8d6a09fb93366205e7 495 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM402_RS14495 2a784389316b5a8d6a09fb93366205e7 495 PIRSF PIRSF006060 2 493 5.9E-87 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS14495 2a784389316b5a8d6a09fb93366205e7 495 Pfam PF00324 Amino acid permease 25 479 5.9E-144 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM402_RS17560 5957bc1a68251d1343198b37cad27ec6 146 Pfam PF07511 Protein of unknown function (DUF1525) 27 139 4.3E-28 T 06-07-2017 IPR011090 Integrating conjugative element protein, PFL4709 AM402_RS17560 5957bc1a68251d1343198b37cad27ec6 146 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 26 137 6.1E-29 T 06-07-2017 IPR011090 Integrating conjugative element protein, PFL4709 AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 Pfam PF02080 TrkA-C domain 293 359 2.5E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 Pfam PF02080 TrkA-C domain 213 275 2.3E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 1.5E-47 T 06-07-2017 IPR006512 YidE/YbjL duplication AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 3.0E-38 T 06-07-2017 IPR006512 YidE/YbjL duplication AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 Gene3D G3DSA:3.30.70.1450 216 278 4.0E-6 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 Gene3D G3DSA:3.30.70.1450 291 360 2.5E-8 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 SUPERFAMILY SSF116726 203 274 5.36E-10 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 SUPERFAMILY SSF116726 288 360 5.23E-12 T 06-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 7.2E-47 T 06-07-2017 IPR006512 YidE/YbjL duplication AM402_RS03355 44e1344969f06f1de6fcd363410b9cac 552 Pfam PF06826 Predicted Permease Membrane Region 11 179 1.8E-43 T 06-07-2017 IPR006512 YidE/YbjL duplication AM402_RS20780 4889cfde3fb47b5c9ae0d21b1764a7e1 271 SUPERFAMILY SSF53335 98 224 6.17E-7 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS20780 4889cfde3fb47b5c9ae0d21b1764a7e1 271 Gene3D G3DSA:3.40.50.150 99 236 2.1E-5 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14175 0272fc5f5efc618980a9cd5929c0e0c9 212 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 16 200 1.0E-56 T 06-07-2017 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AM402_RS14175 0272fc5f5efc618980a9cd5929c0e0c9 212 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 14 196 9.0E-58 T 06-07-2017 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 Gene3D G3DSA:1.10.10.10 1 56 4.7E-24 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 78 145 5.6E-19 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 Gene3D G3DSA:3.30.70.920 58 154 3.3E-24 T 06-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 SUPERFAMILY SSF46785 4 62 9.11E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 6.1E-18 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 6.1E-18 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 6.1E-18 T 06-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 SMART SM00344 5 114 1.1E-39 T 06-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 2.2E-18 T 06-07-2017 AM402_RS11165 e1a30135889595b8eab7af7b5a3b532d 155 SUPERFAMILY SSF54909 68 154 4.16E-18 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS07120 92b0877008505e39c75789d81984bf6d 255 Pfam PF03609 PTS system sorbose-specific iic component 3 232 2.3E-70 T 06-07-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 AM402_RS12760 9bf2eaff998ee049ac63a04b71710dba 462 PIRSF PIRSF000204 1 462 1.9E-237 T 06-07-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM402_RS12760 9bf2eaff998ee049ac63a04b71710dba 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 5.6E-201 T 06-07-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM402_RS12760 9bf2eaff998ee049ac63a04b71710dba 462 Gene3D G3DSA:3.40.50.1220 289 462 1.2E-91 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS12760 9bf2eaff998ee049ac63a04b71710dba 462 SUPERFAMILY SSF52467 289 462 4.19E-78 T 06-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AM402_RS06965 62d7e07414087782ff4b9a28bbe99367 145 Gene3D G3DSA:1.10.1710.10 12 145 7.0E-33 T 06-07-2017 IPR016103 ProQ/FinO domain AM402_RS06965 62d7e07414087782ff4b9a28bbe99367 145 SUPERFAMILY SSF48657 40 145 1.05E-22 T 06-07-2017 IPR016103 ProQ/FinO domain AM402_RS06965 62d7e07414087782ff4b9a28bbe99367 145 SMART SM00945 46 145 0.0051 T 06-07-2017 IPR016103 ProQ/FinO domain AM402_RS06965 62d7e07414087782ff4b9a28bbe99367 145 Pfam PF04352 ProQ/FINO family 46 144 3.0E-18 T 06-07-2017 IPR016103 ProQ/FinO domain AM402_RS09895 d32a36152f48b385b4c5d68e57fe744f 337 Gene3D G3DSA:1.10.443.10 170 327 2.4E-42 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS09895 d32a36152f48b385b4c5d68e57fe744f 337 Pfam PF00589 Phage integrase family 260 319 3.7E-14 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS09895 d32a36152f48b385b4c5d68e57fe744f 337 Pfam PF00589 Phage integrase family 173 244 9.8E-8 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS09895 d32a36152f48b385b4c5d68e57fe744f 337 SUPERFAMILY SSF56349 63 328 4.12E-44 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS08860 b9065cb9eec00aaf551cc535b964093e 228 SUPERFAMILY SSF49401 27 117 3.85E-5 T 06-07-2017 IPR008966 Adhesion domain AM402_RS10980 22ee8fcf7cd1f70cefccb5de3ae4da63 180 Pfam PF00419 Fimbrial protein 35 180 1.1E-10 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS10980 22ee8fcf7cd1f70cefccb5de3ae4da63 180 Gene3D G3DSA:2.60.40.1090 33 180 4.0E-30 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS10980 22ee8fcf7cd1f70cefccb5de3ae4da63 180 SUPERFAMILY SSF49401 34 180 4.18E-32 T 06-07-2017 IPR008966 Adhesion domain AM402_RS12570 a0176382f973fcaa7cfc30be28b0ce5a 495 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 16 441 1.5E-126 T 06-07-2017 IPR002823 Protein of unknown function DUF112, transmembrane AM402_RS18880 e7d4e5869a3b9b24f0c9293a81387e39 104 Pfam PF01722 BolA-like protein 11 83 1.7E-28 T 06-07-2017 IPR002634 BolA protein AM402_RS18880 e7d4e5869a3b9b24f0c9293a81387e39 104 SUPERFAMILY SSF82657 1 89 3.27E-29 T 06-07-2017 IPR002634 BolA protein AM402_RS18880 e7d4e5869a3b9b24f0c9293a81387e39 104 Gene3D G3DSA:3.30.300.90 1 101 1.5E-29 T 06-07-2017 IPR002634 BolA protein AM402_RS18880 e7d4e5869a3b9b24f0c9293a81387e39 104 PIRSF PIRSF003113 1 99 1.8E-33 T 06-07-2017 IPR002634 BolA protein AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 Gene3D G3DSA:1.10.10.10 7 77 3.0E-25 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.6E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.6E-9 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 Pfam PF07729 FCD domain 99 226 4.6E-19 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 SUPERFAMILY SSF46785 7 77 5.54E-21 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 Gene3D G3DSA:1.20.120.530 95 238 7.7E-17 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 SMART SM00345 15 74 1.1E-25 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 SUPERFAMILY SSF48008 95 235 8.37E-21 T 06-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 SMART SM00895 99 227 6.6E-17 T 06-07-2017 IPR011711 GntR, C-terminal AM402_RS07555 18e76dfe9cc32642256bd6dbc3d59ab1 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 9.9E-22 T 06-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM402_RS06150 b8467c7b7bfdb56b19fddecdee295262 282 Pfam PF00899 ThiF family 28 267 1.7E-40 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM402_RS06150 b8467c7b7bfdb56b19fddecdee295262 282 SUPERFAMILY SSF69572 4 263 5.36E-67 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM402_RS06150 b8467c7b7bfdb56b19fddecdee295262 282 Gene3D G3DSA:3.40.50.720 2 265 1.6E-57 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS18205 d606da1db54d5f9673a8b604c0ed5bb0 875 Pfam PF13953 PapC C-terminal domain 772 830 2.5E-11 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS18205 d606da1db54d5f9673a8b604c0ed5bb0 875 SUPERFAMILY SSF141729 48 170 7.19E-25 T 06-07-2017 AM402_RS18205 d606da1db54d5f9673a8b604c0ed5bb0 875 Pfam PF13954 PapC N-terminal domain 50 196 9.6E-34 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS18205 d606da1db54d5f9673a8b604c0ed5bb0 875 Pfam PF00577 Outer membrane usher protein 212 763 4.7E-185 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS05445 3f43f19da2490de1b2e15def9fb1779d 139 SUPERFAMILY SSF50249 1 130 1.54E-31 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS05445 3f43f19da2490de1b2e15def9fb1779d 139 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 118 4.1E-25 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS05445 3f43f19da2490de1b2e15def9fb1779d 139 Hamap MF_00984 Single-stranded DNA-binding protein. 2 113 22.299 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS05445 3f43f19da2490de1b2e15def9fb1779d 139 Pfam PF00436 Single-strand binding protein family 3 107 1.6E-20 T 06-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM402_RS05445 3f43f19da2490de1b2e15def9fb1779d 139 PIRSF PIRSF002070 1 138 8.1E-22 T 06-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM402_RS05445 3f43f19da2490de1b2e15def9fb1779d 139 Gene3D G3DSA:2.40.50.140 1 136 5.7E-33 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS04505 05f0712f81a08c43970b970dfb025a08 196 Pfam PF11198 Protein of unknown function (DUF2857) 10 181 1.3E-64 T 06-07-2017 IPR021364 Protein of unknown function DUF2857 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 SUPERFAMILY SSF48498 68 204 1.89E-35 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 2.8E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 2.8E-7 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 SUPERFAMILY SSF46689 4 68 5.99E-14 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 Gene3D G3DSA:1.10.357.10 62 204 2.1E-44 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 68 202 8.0E-45 T 06-07-2017 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 3.1E-11 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 PRINTS PR00400 Tetracycline repressor protein signature 130 149 1.4E-52 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 PRINTS PR00400 Tetracycline repressor protein signature 95 118 1.4E-52 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 PRINTS PR00400 Tetracycline repressor protein signature 21 44 1.4E-52 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 PRINTS PR00400 Tetracycline repressor protein signature 75 94 1.4E-52 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 PRINTS PR00400 Tetracycline repressor protein signature 185 199 1.4E-52 T 06-07-2017 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 AM402_RS05685 faa81d449f3baffdc22fd5a1ac792b3c 207 Gene3D G3DSA:1.10.10.60 3 61 2.5E-21 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS03270 57010ac3edaf56b374e0546ca69f28f4 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 31 458 1.4E-137 T 06-07-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM402_RS03270 57010ac3edaf56b374e0546ca69f28f4 463 Pfam PF00860 Permease family 35 428 2.2E-109 T 06-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS03270 57010ac3edaf56b374e0546ca69f28f4 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 376 396 - T 06-07-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM402_RS03270 57010ac3edaf56b374e0546ca69f28f4 463 TIGRFAM TIGR03173 pbuX: xanthine permease 40 460 1.8E-129 T 06-07-2017 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AM402_RS19930 61e2d475b6b7129ed8e3025e000cee50 294 Gene3D G3DSA:1.10.3720.10 62 291 2.5E-53 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS19930 61e2d475b6b7129ed8e3025e000cee50 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 293 2.8E-16 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS19930 61e2d475b6b7129ed8e3025e000cee50 294 SUPERFAMILY SSF161098 56 283 1.31E-52 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS13515 6daf792f861d62d9f6529f7a09d0b75c 772 Pfam PF02470 MlaD protein 47 138 8.8E-15 T 06-07-2017 IPR003399 Mce/MlaD AM402_RS13515 6daf792f861d62d9f6529f7a09d0b75c 772 Pfam PF02470 MlaD protein 530 598 1.9E-9 T 06-07-2017 IPR003399 Mce/MlaD AM402_RS13515 6daf792f861d62d9f6529f7a09d0b75c 772 Pfam PF02470 MlaD protein 643 706 1.1E-7 T 06-07-2017 IPR003399 Mce/MlaD AM402_RS13515 6daf792f861d62d9f6529f7a09d0b75c 772 Pfam PF02470 MlaD protein 162 221 3.5E-8 T 06-07-2017 IPR003399 Mce/MlaD AM402_RS04270 2e9546e5a4edf0ca3fdd031583a4fcb0 445 Pfam PF02447 GntP family permease 5 441 5.5E-153 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM402_RS04270 2e9546e5a4edf0ca3fdd031583a4fcb0 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 1.4E-158 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM402_RS04270 2e9546e5a4edf0ca3fdd031583a4fcb0 445 PIRSF PIRSF002746 1 445 2.4E-147 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM402_RS14260 8717c996ce2a348dc13e9182e781d78a 209 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 198 5.0E-50 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 AM402_RS14260 8717c996ce2a348dc13e9182e781d78a 209 Pfam PF04356 Protein of unknown function (DUF489) 7 199 2.0E-65 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 AM402_RS14260 8717c996ce2a348dc13e9182e781d78a 209 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 32.674 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 AM402_RS14260 8717c996ce2a348dc13e9182e781d78a 209 Gene3D G3DSA:1.10.3890.10 2 209 1.5E-72 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 AM402_RS14260 8717c996ce2a348dc13e9182e781d78a 209 SUPERFAMILY SSF101322 2 208 4.97E-65 T 06-07-2017 IPR007451 Uncharacterised protein family UPF0274 AM402_RS10330 8338f69d9689d310da90b0bebca21d62 346 Pfam PF03837 RecT family 34 198 1.8E-27 T 06-07-2017 IPR018330 RecT family GO:0003677|GO:0006259 AM402_RS12035 c40d542c8cd42a803206af83fd48d190 348 Gene3D G3DSA:3.90.226.10 101 204 1.6E-32 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS12035 c40d542c8cd42a803206af83fd48d190 348 Gene3D G3DSA:3.90.226.10 270 299 1.6E-32 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS12035 c40d542c8cd42a803206af83fd48d190 348 SUPERFAMILY SSF52096 98 208 5.36E-30 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS12035 c40d542c8cd42a803206af83fd48d190 348 SUPERFAMILY SSF52096 239 296 5.36E-30 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS12035 c40d542c8cd42a803206af83fd48d190 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 6.9E-58 T 06-07-2017 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AM402_RS12035 c40d542c8cd42a803206af83fd48d190 348 Pfam PF01343 Peptidase family S49 160 299 4.1E-45 T 06-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM402_RS20000 5058fe79cfb96d85ca33c627b0d94e90 134 Pfam PF10694 Protein of unknown function (DUF2500) 9 120 2.0E-26 T 06-07-2017 IPR019635 Protein of unknown function DUF2500 AM402_RS03020 288f145eb021f276a273afd353ddd8f8 261 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 255 45.323 T 06-07-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AM402_RS03020 288f145eb021f276a273afd353ddd8f8 261 SUPERFAMILY SSF53474 3 251 4.35E-45 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS03020 288f145eb021f276a273afd353ddd8f8 261 Gene3D G3DSA:3.40.50.1820 3 252 2.6E-54 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS03020 288f145eb021f276a273afd353ddd8f8 261 Pfam PF00561 alpha/beta hydrolase fold 15 243 3.5E-20 T 06-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AM402_RS03020 288f145eb021f276a273afd353ddd8f8 261 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 251 7.4E-98 T 06-07-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AM402_RS12170 859f4d32973d27e4c16a2e9e0e31063d 358 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 13 358 27.785 T 06-07-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AM402_RS12170 859f4d32973d27e4c16a2e9e0e31063d 358 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 18 358 5.2E-140 T 06-07-2017 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AM402_RS12170 859f4d32973d27e4c16a2e9e0e31063d 358 Pfam PF03116 NQR2, RnfD, RnfE family 15 357 1.9E-107 T 06-07-2017 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AM402_RS11945 66af38428ab9fd2b67ebccafa79ccbe0 143 Pfam PF03061 Thioesterase superfamily 26 98 2.0E-20 T 06-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AM402_RS11945 66af38428ab9fd2b67ebccafa79ccbe0 143 SUPERFAMILY SSF54637 8 131 4.99E-38 T 06-07-2017 IPR029069 HotDog domain AM402_RS11945 66af38428ab9fd2b67ebccafa79ccbe0 143 Gene3D G3DSA:3.10.129.10 4 131 1.4E-42 T 06-07-2017 IPR029069 HotDog domain AM402_RS17805 6d97adb75452d13bbfda3fbf813a3c46 133 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 8 129 1.9E-41 T 06-07-2017 IPR022262 Lipoprotein, putative AM402_RS01845 285553ac84d6a350db62578c4530cfa4 104 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 28 76 3.3E-6 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS01845 285553ac84d6a350db62578c4530cfa4 104 SUPERFAMILY SSF47413 19 77 5.04E-9 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS01845 285553ac84d6a350db62578c4530cfa4 104 Gene3D G3DSA:1.10.260.40 19 76 2.3E-8 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS03955 a251e1a3b6578cc0a9bcfdfb3d4b0ff7 259 Gene3D G3DSA:1.10.3720.10 5 255 1.0E-55 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03955 a251e1a3b6578cc0a9bcfdfb3d4b0ff7 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 251 1.1E-18 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03955 a251e1a3b6578cc0a9bcfdfb3d4b0ff7 259 SUPERFAMILY SSF161098 3 254 1.68E-56 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS01730 1685f8340cfe303e17dce851f60440ec 377 SUPERFAMILY SSF53756 6 374 5.76E-70 T 06-07-2017 AM402_RS01730 1685f8340cfe303e17dce851f60440ec 377 Pfam PF13439 Glycosyltransferase Family 4 18 183 1.1E-16 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM402_RS01730 1685f8340cfe303e17dce851f60440ec 377 Pfam PF00534 Glycosyl transferases group 1 194 342 2.1E-27 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS01730 1685f8340cfe303e17dce851f60440ec 377 Gene3D G3DSA:3.40.50.2000 166 353 2.7E-26 T 06-07-2017 AM402_RS15050 77ff25ce7974b04e8309a3301e1a2195 56 Gene3D G3DSA:1.10.10.620 1 52 3.9E-27 T 06-07-2017 IPR023200 Ribosome modulation factor-like domain AM402_RS15050 77ff25ce7974b04e8309a3301e1a2195 56 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 3.0E-19 T 06-07-2017 IPR007040 Ribosome modulation factor AM402_RS15050 77ff25ce7974b04e8309a3301e1a2195 56 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.482 T 06-07-2017 IPR007040 Ribosome modulation factor AM402_RS15050 77ff25ce7974b04e8309a3301e1a2195 56 Pfam PF04957 Ribosome modulation factor 1 51 8.7E-29 T 06-07-2017 IPR007040 Ribosome modulation factor AM402_RS05125 c8c98d860d2a18b81763e9293ae9a1c3 513 PIRSF PIRSF028991 3 513 5.2E-261 T 06-07-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted AM402_RS05125 c8c98d860d2a18b81763e9293ae9a1c3 513 Pfam PF11230 Protein of unknown function (DUF3029) 19 501 2.3E-225 T 06-07-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted AM402_RS05125 c8c98d860d2a18b81763e9293ae9a1c3 513 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 8 501 1.2E-230 T 06-07-2017 IPR016905 Glycyl radical enzyme, HI0521, predicted AM402_RS05125 c8c98d860d2a18b81763e9293ae9a1c3 513 Gene3D G3DSA:3.20.70.20 78 251 8.0E-11 T 06-07-2017 AM402_RS05125 c8c98d860d2a18b81763e9293ae9a1c3 513 SUPERFAMILY SSF51998 12 477 1.65E-84 T 06-07-2017 AM402_RS00320 4365e2663bb7a481108f3eaaa9f939dc 215 Gene3D G3DSA:2.40.128.20 29 215 3.6E-81 T 06-07-2017 IPR012674 Calycin AM402_RS00320 4365e2663bb7a481108f3eaaa9f939dc 215 SUPERFAMILY SSF50814 34 215 2.12E-74 T 06-07-2017 IPR011038 Calycin-like AM402_RS00320 4365e2663bb7a481108f3eaaa9f939dc 215 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 38 215 6.8E-83 T 06-07-2017 IPR015304 ZinT domain GO:0008270 AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 507 519 3.0E-13 T 06-07-2017 AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 247 3.0E-13 T 06-07-2017 AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 543 567 3.0E-13 T 06-07-2017 AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 286 300 3.0E-13 T 06-07-2017 AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 SUPERFAMILY SSF53335 282 376 2.16E-53 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 SUPERFAMILY SSF53335 75 250 2.16E-53 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 SUPERFAMILY SSF53335 502 687 2.16E-53 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 Gene3D G3DSA:3.40.50.150 498 636 1.1E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 Gene3D G3DSA:3.40.50.150 233 250 1.1E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 Gene3D G3DSA:3.40.50.150 282 374 1.1E-43 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS05285 d76068343fb973bd9b4b1d3e71566c16 1239 Pfam PF02384 N-6 DNA Methylase 503 637 7.6E-9 T 06-07-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM402_RS09160 b7555403be5f8612a7e435e2ebdec95b 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 18.329 T 06-07-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AM402_RS09160 b7555403be5f8612a7e435e2ebdec95b 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 1.2E-19 T 06-07-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AM402_RS16150 615aac837b9ddb42fcd6e73c35013315 385 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 385 4.5E-179 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS16150 615aac837b9ddb42fcd6e73c35013315 385 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 368 5.0E-107 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS16150 615aac837b9ddb42fcd6e73c35013315 385 PIRSF PIRSF000267 2 384 3.4E-126 T 06-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM402_RS02960 42fc50855ed2556a98a86cf149a09316 153 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 8 147 7.1E-15 T 06-07-2017 IPR009936 Protein of unknown function DUF1468 AM402_RS17775 15f4cca27b4d34d765189170dafb2a76 471 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 46 461 3.6E-155 T 06-07-2017 IPR021204 Integrating conjugative element protein, PFL4711 AM402_RS04625 50be8c43bc20a8e33c71a847ac2f13fd 31 Pfam PF08020 Protein of unknown function (DUF1706) 1 25 2.2E-5 T 06-07-2017 IPR012550 Protein of unknown function DUF1706 AM402_RS09230 9bcd357f6a72075610f04ce71cf598b3 180 Pfam PF07437 YfaZ precursor 1 180 2.8E-55 T 06-07-2017 IPR009998 YfaZ AM402_RS09230 9bcd357f6a72075610f04ce71cf598b3 180 Gene3D G3DSA:2.40.160.10 44 178 4.5E-4 T 06-07-2017 IPR023614 Porin domain AM402_RS09230 9bcd357f6a72075610f04ce71cf598b3 180 SUPERFAMILY SSF56925 16 118 3.69E-5 T 06-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM402_RS17425 eee4eec0abd5c1ec6c07920547bcaf9f 97 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 9 84 4.5E-14 T 06-07-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system AM402_RS05055 fd27bdcc8f6214192e52483c57f3d52a 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 321 333 2.7E-9 T 06-07-2017 AM402_RS05055 fd27bdcc8f6214192e52483c57f3d52a 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 2.7E-9 T 06-07-2017 AM402_RS05055 fd27bdcc8f6214192e52483c57f3d52a 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 2.7E-9 T 06-07-2017 AM402_RS05055 fd27bdcc8f6214192e52483c57f3d52a 522 Pfam PF00361 Proton-conducting membrane transporter 132 424 1.6E-58 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS05055 fd27bdcc8f6214192e52483c57f3d52a 522 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 71 119 1.6E-6 T 06-07-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS11845 33a06f85b486a7c61ac401780b1cc97e 124 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 6 114 1.2E-35 T 06-07-2017 IPR014320 Phage shock protein, PspC AM402_RS11845 33a06f85b486a7c61ac401780b1cc97e 124 Pfam PF04024 PspC domain 6 63 2.4E-17 T 06-07-2017 IPR007168 Phage shock protein, PspC, N-terminal AM402_RS04930 69fa361805a8b3ed9c6c4ce32a2e5030 190 Gene3D G3DSA:1.10.357.10 3 178 6.1E-9 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS03030 a0a87f97eb4bb6784a0b22cf1eb6b8e1 77 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 76 24.809 T 06-07-2017 IPR023732 Probable [Fe-S]-dependent transcriptional repressor AM402_RS03030 a0a87f97eb4bb6784a0b22cf1eb6b8e1 77 SUPERFAMILY SSF46785 1 73 7.35E-17 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS03030 a0a87f97eb4bb6784a0b22cf1eb6b8e1 77 Pfam PF09012 FeoC like transcriptional regulator 3 73 2.5E-17 T 06-07-2017 IPR015102 Transcriptional regulator HTH-type, FeoC AM402_RS18030 16940cfb2772e10f4344ff3623c0b683 473 SUPERFAMILY SSF55604 10 83 1.57E-20 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS18030 16940cfb2772e10f4344ff3623c0b683 473 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 461 5.0E-193 T 06-07-2017 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 AM402_RS18030 16940cfb2772e10f4344ff3623c0b683 473 Gene3D G3DSA:3.30.1360.60 7 83 2.9E-22 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS18030 16940cfb2772e10f4344ff3623c0b683 473 Pfam PF02378 Phosphotransferase system, EIIC 113 405 1.5E-36 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM402_RS18030 16940cfb2772e10f4344ff3623c0b683 473 Pfam PF00367 phosphotransferase system, EIIB 12 44 2.3E-13 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS18030 16940cfb2772e10f4344ff3623c0b683 473 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS18620 7fd3b44cf7a6bd59c3afcb546ff5a051 409 SUPERFAMILY SSF103473 10 407 3.92E-84 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS18620 7fd3b44cf7a6bd59c3afcb546ff5a051 409 Pfam PF07690 Major Facilitator Superfamily 29 271 4.7E-35 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS18620 7fd3b44cf7a6bd59c3afcb546ff5a051 409 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM402_RS18620 7fd3b44cf7a6bd59c3afcb546ff5a051 409 Gene3D G3DSA:1.20.1250.20 221 404 5.0E-25 T 06-07-2017 AM402_RS18620 7fd3b44cf7a6bd59c3afcb546ff5a051 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 277 292 - T 06-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM402_RS18620 7fd3b44cf7a6bd59c3afcb546ff5a051 409 Gene3D G3DSA:1.20.1250.20 10 197 3.2E-35 T 06-07-2017 AM402_RS04285 29e7621876909e4f146b5a18a4c65227 397 SUPERFAMILY SSF52266 167 369 4.73E-23 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS04285 29e7621876909e4f146b5a18a4c65227 397 Gene3D G3DSA:3.40.50.1110 168 370 8.6E-20 T 06-07-2017 IPR013830 SGNH hydrolase-type esterase domain AM402_RS04285 29e7621876909e4f146b5a18a4c65227 397 Pfam PF04311 Protein of unknown function (DUF459) 152 365 5.5E-26 T 06-07-2017 IPR007407 Protein of unknown function DUF459 AM402_RS21895 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 1.5E-48 T 06-07-2017 IPR032874 DDE domain AM402_RS21895 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS21895 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 75 143 1.7E-5 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS11855 806b27dfea9741b3c9931277dc18b2e3 464 PIRSF PIRSF019381 1 464 3.4E-212 T 06-07-2017 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM402_RS11855 806b27dfea9741b3c9931277dc18b2e3 464 Pfam PF04317 YcjX-like family, DUF463 20 463 2.9E-187 T 06-07-2017 IPR007413 Protein of unknown function DUF463, YcjX-like protein AM402_RS21220 2afeaee75bdd52a97b9ef5adcb5262cc 535 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 128 317 6.1E-15 T 06-07-2017 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AM402_RS21220 2afeaee75bdd52a97b9ef5adcb5262cc 535 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 84 383 6.7E-59 T 06-07-2017 IPR014150 Conjugal transfer, TrbL AM402_RS10065 0775beceb34b07edf2862f807cd53b15 411 SUPERFAMILY SSF111369 80 316 5.36E-56 T 06-07-2017 AM402_RS10065 0775beceb34b07edf2862f807cd53b15 411 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 411 51.818 T 06-07-2017 IPR022824 Multidrug resistance protein MdtA AM402_RS10065 0775beceb34b07edf2862f807cd53b15 411 Pfam PF13437 HlyD family secretion protein 199 302 9.8E-8 T 06-07-2017 AM402_RS10065 0775beceb34b07edf2862f807cd53b15 411 Pfam PF13533 Biotin-lipoyl like 89 137 5.3E-15 T 06-07-2017 AM402_RS10065 0775beceb34b07edf2862f807cd53b15 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 392 7.9E-80 T 06-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AM402_RS10065 0775beceb34b07edf2862f807cd53b15 411 Gene3D G3DSA:2.40.50.100 197 231 7.8E-23 T 06-07-2017 AM402_RS10065 0775beceb34b07edf2862f807cd53b15 411 Gene3D G3DSA:2.40.50.100 89 122 7.8E-23 T 06-07-2017 AM402_RS04120 dbddbd60036dd3178690cb77e45fc5cc 190 Pfam PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) 14 186 8.0E-24 T 06-07-2017 IPR013388 Type III secretion apparatus protein OrgA/MxiK GO:0009405 AM402_RS14030 0967851bfe8b2d1790df930b4cbe484f 1101 Pfam PF10145 Phage-related minor tail protein 109 310 3.5E-23 T 06-07-2017 IPR010090 Phage tail tape measure protein AM402_RS14030 0967851bfe8b2d1790df930b4cbe484f 1101 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 887 948 7.1E-5 T 06-07-2017 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM402_RS14030 0967851bfe8b2d1790df930b4cbe484f 1101 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 85 375 2.7E-24 T 06-07-2017 IPR010090 Phage tail tape measure protein AM402_RS20120 ec2d8a0cd26be54857f69ef1af326b0c 185 Gene3D G3DSA:3.30.70.20 101 172 4.4E-17 T 06-07-2017 AM402_RS20120 ec2d8a0cd26be54857f69ef1af326b0c 185 SUPERFAMILY SSF54862 1 174 9.21E-45 T 06-07-2017 AM402_RS20120 ec2d8a0cd26be54857f69ef1af326b0c 185 Gene3D G3DSA:3.30.70.20 4 66 3.9E-11 T 06-07-2017 AM402_RS20120 ec2d8a0cd26be54857f69ef1af326b0c 185 Gene3D G3DSA:3.30.70.20 67 100 5.6E-15 T 06-07-2017 AM402_RS20120 ec2d8a0cd26be54857f69ef1af326b0c 185 Pfam PF12798 4Fe-4S binding domain 135 155 0.092 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS20120 ec2d8a0cd26be54857f69ef1af326b0c 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 93 104 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS20120 ec2d8a0cd26be54857f69ef1af326b0c 185 Pfam PF00037 4Fe-4S binding domain 86 107 1.2E-8 T 06-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM402_RS18525 0bf3ff13ff592f7a37661d0fdcacfb9e 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 500 677 8.1E-12 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18525 0bf3ff13ff592f7a37661d0fdcacfb9e 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 209 402 3.6E-16 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18525 0bf3ff13ff592f7a37661d0fdcacfb9e 692 SUPERFAMILY SSF161098 145 405 1.13E-41 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18525 0bf3ff13ff592f7a37661d0fdcacfb9e 692 Gene3D G3DSA:1.10.3720.10 429 681 6.0E-44 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18525 0bf3ff13ff592f7a37661d0fdcacfb9e 692 Gene3D G3DSA:1.10.3720.10 145 404 5.3E-40 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18525 0bf3ff13ff592f7a37661d0fdcacfb9e 692 SUPERFAMILY SSF161098 435 674 6.98E-45 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS13655 38b77ce1532d778d76efcd80efcd31cb 180 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 98 163 2.4E-6 T 06-07-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 AM402_RS13655 38b77ce1532d778d76efcd80efcd31cb 180 SUPERFAMILY SSF52540 7 179 1.13E-15 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS13655 38b77ce1532d778d76efcd80efcd31cb 180 Gene3D G3DSA:3.40.50.300 5 179 4.9E-23 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15630 5480776a288e8665c04f1d582e6ea4a0 442 TIGRFAM TIGR00814 stp: serine transporter 21 423 5.2E-180 T 06-07-2017 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 AM402_RS15630 5480776a288e8665c04f1d582e6ea4a0 442 Pfam PF03222 Tryptophan/tyrosine permease family 33 401 7.6E-14 T 06-07-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 AM402_RS16860 586092d6d8ae1eeda2327f77f10a7b45 214 PIRSF PIRSF016262 6 214 1.6E-58 T 06-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM402_RS16860 586092d6d8ae1eeda2327f77f10a7b45 214 Gene3D G3DSA:3.90.1550.10 8 208 1.3E-71 T 06-07-2017 AM402_RS16860 586092d6d8ae1eeda2327f77f10a7b45 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 80 133 1.0E-18 T 06-07-2017 AM402_RS16860 586092d6d8ae1eeda2327f77f10a7b45 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 164 9.5E-9 T 06-07-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM402_RS16860 586092d6d8ae1eeda2327f77f10a7b45 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 208 1.4E-71 T 06-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM402_RS16860 586092d6d8ae1eeda2327f77f10a7b45 214 SUPERFAMILY SSF55681 8 210 2.9E-71 T 06-07-2017 AM402_RS16860 586092d6d8ae1eeda2327f77f10a7b45 214 Hamap MF_00013 Octanoyltransferase [lipB]. 10 211 37.391 T 06-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM402_RS16860 586092d6d8ae1eeda2327f77f10a7b45 214 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 76 91 - T 06-07-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM402_RS02870 9202b8c8829c1b4fa9c786cbcf7060c4 115 SUPERFAMILY SSF46973 15 113 1.44E-34 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 AM402_RS02870 9202b8c8829c1b4fa9c786cbcf7060c4 115 Gene3D G3DSA:1.20.58.80 14 115 1.9E-41 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 AM402_RS02870 9202b8c8829c1b4fa9c786cbcf7060c4 115 PIRSF PIRSF000699 10 115 1.6E-38 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 AM402_RS02870 9202b8c8829c1b4fa9c786cbcf7060c4 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 5.2E-33 T 06-07-2017 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 AM402_RS21280 a99be4b3cba8af6c1caf85630b521495 704 SUPERFAMILY SSF52540 216 599 9.56E-21 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21280 a99be4b3cba8af6c1caf85630b521495 704 Gene3D G3DSA:3.40.50.300 212 328 2.9E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21280 a99be4b3cba8af6c1caf85630b521495 704 Gene3D G3DSA:3.40.50.300 411 599 2.9E-20 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21890 3853d52d452fa491835241856c2b14f3 232 Gene3D G3DSA:1.10.443.10 116 202 3.3E-19 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS21890 3853d52d452fa491835241856c2b14f3 232 SUPERFAMILY SSF56349 16 200 3.68E-26 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS21890 3853d52d452fa491835241856c2b14f3 232 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 99 4.1E-27 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS21890 3853d52d452fa491835241856c2b14f3 232 Pfam PF00589 Phage integrase family 116 211 5.3E-27 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS21890 3853d52d452fa491835241856c2b14f3 232 Gene3D G3DSA:1.10.150.130 28 90 1.3E-4 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS21890 3853d52d452fa491835241856c2b14f3 232 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 228 9.8E-92 T 06-07-2017 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AM402_RS13330 c1eef490028665eee7d06fe7f8c4728e 553 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 10 241 4.6E-37 T 06-07-2017 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AM402_RS13330 c1eef490028665eee7d06fe7f8c4728e 553 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 5 552 42.694 T 06-07-2017 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 AM402_RS04895 2b6c2e04caf43d28d50c7ea7c407a6f2 324 Pfam PF08401 Domain of unknown function (DUF1738) 18 145 3.2E-37 T 06-07-2017 IPR013610 Domain of unknown function DUF1738 AM402_RS04895 2b6c2e04caf43d28d50c7ea7c407a6f2 324 PIRSF PIRSF037112 4 324 3.0E-107 T 06-07-2017 IPR017113 Antirestriction, ArdC AM402_RS09945 992759d8f21c37274f04c9fffa83b30d 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 186 25.163 T 06-07-2017 IPR022929 Putative manganese efflux pump MntP AM402_RS09945 992759d8f21c37274f04c9fffa83b30d 194 Pfam PF02659 Putative manganese efflux pump 32 183 2.5E-51 T 06-07-2017 IPR003810 Putative manganese efflux pump AM402_RS19705 dee8a8fee61b41c143bb2b5c9ddc703a 97 SUPERFAMILY SSF52091 1 96 2.94E-15 T 06-07-2017 IPR002645 STAS domain AM402_RS19705 dee8a8fee61b41c143bb2b5c9ddc703a 97 Pfam PF13466 STAS domain 14 91 2.0E-12 T 06-07-2017 IPR002645 STAS domain AM402_RS19705 dee8a8fee61b41c143bb2b5c9ddc703a 97 Gene3D G3DSA:3.30.750.24 6 96 8.1E-14 T 06-07-2017 IPR002645 STAS domain AM402_RS15410 fe7eea10edcf9038ab286a598d394020 789 Pfam PF13567 Domain of unknown function (DUF4131) 58 189 5.6E-7 T 06-07-2017 IPR025405 Domain of unknown function DUF4131 AM402_RS15410 fe7eea10edcf9038ab286a598d394020 789 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 258 442 1.1E-35 T 06-07-2017 IPR004477 ComEC/Rec2-related protein AM402_RS15410 fe7eea10edcf9038ab286a598d394020 789 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 106 753 2.2E-151 T 06-07-2017 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AM402_RS15410 fe7eea10edcf9038ab286a598d394020 789 SMART SM00849 542 724 1.3E-8 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS15410 fe7eea10edcf9038ab286a598d394020 789 SUPERFAMILY SSF56281 532 777 1.76E-46 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS15410 fe7eea10edcf9038ab286a598d394020 789 Pfam PF03772 Competence protein 237 505 1.4E-48 T 06-07-2017 IPR004477 ComEC/Rec2-related protein AM402_RS15410 fe7eea10edcf9038ab286a598d394020 789 Gene3D G3DSA:3.60.15.10 529 741 2.6E-26 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS15410 fe7eea10edcf9038ab286a598d394020 789 Pfam PF00753 Metallo-beta-lactamase superfamily 540 722 4.9E-15 T 06-07-2017 IPR001279 Metallo-beta-lactamase AM402_RS17135 3714f03c86802e59b5733f2759ae6895 62 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 06-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM402_RS17135 3714f03c86802e59b5733f2759ae6895 62 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 1.3E-31 T 06-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM402_RS17135 3714f03c86802e59b5733f2759ae6895 62 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.749 T 06-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM402_RS17135 3714f03c86802e59b5733f2759ae6895 62 Pfam PF02599 Global regulator protein family 1 52 8.7E-28 T 06-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM402_RS17135 3714f03c86802e59b5733f2759ae6895 62 SUPERFAMILY SSF117130 1 54 1.7E-21 T 06-07-2017 AM402_RS04590 d00eb70102dcde115a43161b9c39ba1a 78 Pfam PF04224 Protein of unknown function, DUF417 12 73 4.1E-17 T 06-07-2017 IPR007339 Protein of unknown function DUF417 AM402_RS00965 931c4dea059e039ae30e7ec6a5ba8d9d 63 Gene3D G3DSA:1.10.287.310 1 60 1.0E-27 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00965 931c4dea059e039ae30e7ec6a5ba8d9d 63 Pfam PF00831 Ribosomal L29 protein 4 60 6.0E-23 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00965 931c4dea059e039ae30e7ec6a5ba8d9d 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.0E-22 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00965 931c4dea059e039ae30e7ec6a5ba8d9d 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.676 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00965 931c4dea059e039ae30e7ec6a5ba8d9d 63 SUPERFAMILY SSF46561 1 61 6.41E-22 T 06-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00965 931c4dea059e039ae30e7ec6a5ba8d9d 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 06-07-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 SUPERFAMILY SSF159871 5 95 4.84E-21 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 Pfam PF07338 Protein of unknown function (DUF1471) 262 317 7.9E-19 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 Pfam PF07338 Protein of unknown function (DUF1471) 119 175 1.4E-16 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 Pfam PF07338 Protein of unknown function (DUF1471) 35 91 8.1E-17 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 SUPERFAMILY SSF159871 242 317 6.02E-17 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 SUPERFAMILY SSF159871 107 179 5.36E-16 T 06-07-2017 IPR010854 Domain of unknown function DUF1471 AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 Gene3D G3DSA:3.30.1660.10 252 317 3.6E-22 T 06-07-2017 IPR025543 Dodecin-like AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 Gene3D G3DSA:3.30.1660.10 25 92 3.2E-23 T 06-07-2017 IPR025543 Dodecin-like AM402_RS12770 34542ec7a0bf25b79c39ebc515941fe8 317 Gene3D G3DSA:3.30.1660.10 109 176 5.9E-20 T 06-07-2017 IPR025543 Dodecin-like AM402_RS16905 6d7a0209aed99104599fea25ee212926 322 Pfam PF00268 Ribonucleotide reductase, small chain 12 280 5.4E-88 T 06-07-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16905 6d7a0209aed99104599fea25ee212926 322 PIRSF PIRSF000355 2 319 2.3E-83 T 06-07-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16905 6d7a0209aed99104599fea25ee212926 322 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 10 322 1.5E-145 T 06-07-2017 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM402_RS16905 6d7a0209aed99104599fea25ee212926 322 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 100 116 - T 06-07-2017 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM402_RS16905 6d7a0209aed99104599fea25ee212926 322 Gene3D G3DSA:1.10.620.20 8 277 4.2E-94 T 06-07-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 AM402_RS16905 6d7a0209aed99104599fea25ee212926 322 SUPERFAMILY SSF47240 8 322 1.78E-104 T 06-07-2017 IPR009078 Ferritin-like superfamily AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 4.4E-22 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 4.4E-22 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 4.4E-22 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.4E-22 T 06-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 Pfam PF00557 Metallopeptidase family M24 13 242 1.8E-52 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 Gene3D G3DSA:3.90.230.10 3 256 8.4E-99 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 SUPERFAMILY SSF55920 3 258 4.58E-91 T 06-07-2017 IPR000994 Peptidase M24, structural domain AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.2E-106 T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.722 T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AM402_RS06240 e49a656a44768d65ace3e2b2736b294b 265 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 06-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AM402_RS10735 83e133d952a130d77ac882aeac74d610 101 Pfam PF03891 Domain of unknown function (DUF333) 52 96 2.5E-14 T 06-07-2017 IPR005590 Protein of unknown function DUF333 AM402_RS13930 c374181aa36d90c0fa85065368c10f17 79 Gene3D G3DSA:1.10.260.40 9 78 1.2E-30 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS13930 c374181aa36d90c0fa85065368c10f17 79 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 10 74 4.1E-32 T 06-07-2017 IPR031856 Putative bacterial antitoxin YdaS AM402_RS13930 c374181aa36d90c0fa85065368c10f17 79 SUPERFAMILY SSF47413 10 71 1.94E-17 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS10995 8ec3915b3b0f6ed11e76c32ea0b3f2a5 344 Pfam PF00419 Fimbrial protein 201 343 1.2E-20 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS10995 8ec3915b3b0f6ed11e76c32ea0b3f2a5 344 SUPERFAMILY SSF49401 207 343 6.21E-14 T 06-07-2017 IPR008966 Adhesion domain AM402_RS02515 043b7fe1eb04cb0d55e4067cf75f0bed 267 Gene3D G3DSA:3.40.190.10 26 158 1.0E-50 T 06-07-2017 AM402_RS02515 043b7fe1eb04cb0d55e4067cf75f0bed 267 Pfam PF03180 NLPA lipoprotein 29 267 5.6E-82 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS02515 043b7fe1eb04cb0d55e4067cf75f0bed 267 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 13 267 2.7E-92 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS02515 043b7fe1eb04cb0d55e4067cf75f0bed 267 SUPERFAMILY SSF53850 29 267 4.27E-72 T 06-07-2017 AM402_RS02515 043b7fe1eb04cb0d55e4067cf75f0bed 267 PIRSF PIRSF002854 1 267 2.7E-87 T 06-07-2017 IPR004872 Lipoprotein NlpA family AM402_RS03165 83ce362667f0434eac5e7ef8c748b5ac 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 293 6.3E-31 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03165 83ce362667f0434eac5e7ef8c748b5ac 300 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 32 297 1.9E-88 T 06-07-2017 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AM402_RS03165 83ce362667f0434eac5e7ef8c748b5ac 300 SUPERFAMILY SSF161098 42 286 8.22E-36 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03165 83ce362667f0434eac5e7ef8c748b5ac 300 Gene3D G3DSA:1.10.3720.10 33 298 1.8E-41 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS05465 4cffb8e06391f8ced7b99319904555ee 255 Gene3D G3DSA:2.20.140.10 14 74 1.5E-5 T 06-07-2017 IPR008893 WGR domain AM402_RS12545 d4261d7984df075edde7be2bed3c12ee 132 Gene3D G3DSA:3.30.1330.40 13 125 9.2E-30 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS12545 d4261d7984df075edde7be2bed3c12ee 132 SUPERFAMILY SSF55298 8 129 1.88E-31 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS12545 d4261d7984df075edde7be2bed3c12ee 132 Pfam PF01042 Endoribonuclease L-PSP 16 127 6.4E-26 T 06-07-2017 IPR006175 YjgF/YER057c/UK114 family AM402_RS05085 0a9bade3bb3b1bdcd2e599e048a6ebde 330 Gene3D G3DSA:3.90.550.10 6 209 3.1E-53 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS05085 0a9bade3bb3b1bdcd2e599e048a6ebde 330 Pfam PF00535 Glycosyl transferase family 2 9 138 3.2E-31 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM402_RS05085 0a9bade3bb3b1bdcd2e599e048a6ebde 330 SUPERFAMILY SSF53448 6 241 2.81E-52 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS06635 735eb427a102cf821f158d28b1caa756 490 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 27 484 1.9E-113 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM402_RS06635 735eb427a102cf821f158d28b1caa756 490 PIRSF PIRSF002457 3 490 1.0E-136 T 06-07-2017 IPR030676 Citrate carrier CitT-related AM402_RS06635 735eb427a102cf821f158d28b1caa756 490 Pfam PF00939 Sodium:sulfate symporter transmembrane region 12 490 1.2E-140 T 06-07-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AM402_RS20290 90c9d0b632ec93fdab70cc47a223b9f4 241 Gene3D G3DSA:3.40.50.880 1 224 2.6E-60 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS20290 90c9d0b632ec93fdab70cc47a223b9f4 241 SUPERFAMILY SSF52317 1 223 8.59E-33 T 06-07-2017 IPR029062 Class I glutamine amidotransferase-like AM402_RS20290 90c9d0b632ec93fdab70cc47a223b9f4 241 Pfam PF03575 Peptidase family S51 4 205 2.9E-41 T 06-07-2017 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AM402_RS17795 be0dedb7fe23e2902e0d0af5915044c0 1264 Gene3D G3DSA:3.40.50.300 35 98 1.0E-4 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17795 be0dedb7fe23e2902e0d0af5915044c0 1264 Gene3D G3DSA:3.40.50.300 238 301 1.0E-4 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17795 be0dedb7fe23e2902e0d0af5915044c0 1264 SUPERFAMILY SSF52540 34 90 1.98E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS17795 be0dedb7fe23e2902e0d0af5915044c0 1264 SUPERFAMILY SSF52540 246 367 1.98E-7 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15925 682f6c14b73fd9319d122e79abcfeb7f 159 Pfam PF01967 MoaC family 15 150 1.1E-55 T 06-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM402_RS15925 682f6c14b73fd9319d122e79abcfeb7f 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.353 T 06-07-2017 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 AM402_RS15925 682f6c14b73fd9319d122e79abcfeb7f 159 SUPERFAMILY SSF55040 11 155 1.07E-61 T 06-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM402_RS15925 682f6c14b73fd9319d122e79abcfeb7f 159 Gene3D G3DSA:3.30.70.640 3 157 1.4E-69 T 06-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM402_RS15925 682f6c14b73fd9319d122e79abcfeb7f 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 4.7E-72 T 06-07-2017 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AM402_RS04630 8c537580670426109aece183b2fde570 68 SUPERFAMILY SSF53098 1 54 6.07E-5 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS04630 8c537580670426109aece183b2fde570 68 Pfam PF13683 Integrase core domain 1 50 3.5E-7 T 06-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AM402_RS04630 8c537580670426109aece183b2fde570 68 Gene3D G3DSA:3.30.420.10 1 50 5.3E-6 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS14755 cba15fd6ca482e996a7cc7b5bb3de1c7 65 Gene3D G3DSA:1.10.10.10 1 55 4.4E-4 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS18970 2f2eb7c0dcfdf0a1e7aa839917aa109e 307 SUPERFAMILY SSF48576 13 295 4.11E-88 T 06-07-2017 IPR008949 Isoprenoid synthase domain AM402_RS18970 2f2eb7c0dcfdf0a1e7aa839917aa109e 307 Pfam PF00348 Polyprenyl synthetase 40 275 1.4E-57 T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AM402_RS18970 2f2eb7c0dcfdf0a1e7aa839917aa109e 307 Gene3D G3DSA:1.10.600.10 11 305 5.4E-93 T 06-07-2017 IPR008949 Isoprenoid synthase domain AM402_RS18970 2f2eb7c0dcfdf0a1e7aa839917aa109e 307 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 223 235 - T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AM402_RS18970 2f2eb7c0dcfdf0a1e7aa839917aa109e 307 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 89 105 - T 06-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AM402_RS04570 ff52c9e521feb62e6e50ebfda851d696 103 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 93 2.2E-12 T 06-07-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM402_RS04570 ff52c9e521feb62e6e50ebfda851d696 103 SUPERFAMILY SSF52172 1 90 9.44E-21 T 06-07-2017 IPR011006 CheY-like superfamily AM402_RS04570 ff52c9e521feb62e6e50ebfda851d696 103 Gene3D G3DSA:3.40.50.220 1 90 1.6E-24 T 06-07-2017 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AM402_RS01435 975c4080d7e73a0d00763ecb6ed11e77 104 Pfam PF16083 LydA holin phage, holin superfamily III 18 93 9.8E-19 T 06-07-2017 IPR032126 LydA-like holin AM402_RS08340 fec8fe124ba59ea285cdeedd650e69c2 120 Pfam PF04355 SmpA / OmlA family 35 104 2.5E-27 T 06-07-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM402_RS08340 fec8fe124ba59ea285cdeedd650e69c2 120 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 116 31.574 T 06-07-2017 IPR026592 Outer membrane protein assembly factor BamE AM402_RS13830 091257d0a4b1b80ad921473a77ee7c7e 222 Pfam PF04586 Caudovirus prohead serine protease 19 161 1.7E-30 T 06-07-2017 IPR006433 Prohead protease AM402_RS13830 091257d0a4b1b80ad921473a77ee7c7e 222 SUPERFAMILY SSF50789 27 161 6.54E-6 T 06-07-2017 AM402_RS13830 091257d0a4b1b80ad921473a77ee7c7e 222 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 24 160 6.1E-44 T 06-07-2017 IPR006433 Prohead protease AM402_RS14985 846c74d2f4236b3dd887f64bfe719356 109 SUPERFAMILY SSF69721 2 109 1.96E-42 T 06-07-2017 IPR025526 DsrC-like domain AM402_RS14985 846c74d2f4236b3dd887f64bfe719356 109 PIRSF PIRSF006223 2 109 7.2E-46 T 06-07-2017 IPR007453 Sulphur transfer protein DsrC/TusE AM402_RS14985 846c74d2f4236b3dd887f64bfe719356 109 Pfam PF04358 DsrC like protein 4 109 2.1E-46 T 06-07-2017 IPR007453 Sulphur transfer protein DsrC/TusE AM402_RS14985 846c74d2f4236b3dd887f64bfe719356 109 Gene3D G3DSA:1.10.10.370 40 109 9.3E-39 T 06-07-2017 AM402_RS14985 846c74d2f4236b3dd887f64bfe719356 109 Gene3D G3DSA:3.30.1420.10 3 39 1.9E-13 T 06-07-2017 AM402_RS14985 846c74d2f4236b3dd887f64bfe719356 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.4E-50 T 06-07-2017 IPR007453 Sulphur transfer protein DsrC/TusE AM402_RS21820 890ddcd5b4d5dfe70b29fcee870f3ab4 140 Pfam PF03203 MerC mercury resistance protein 9 120 1.7E-20 T 06-07-2017 IPR004891 MerC mercury resistance protein AM402_RS21820 890ddcd5b4d5dfe70b29fcee870f3ab4 140 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 139 2.0E-53 T 06-07-2017 IPR004891 MerC mercury resistance protein AM402_RS12720 8b6b441a49ab2554dc437cf20f65e37d 610 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 252 342 7.0E-6 T 06-07-2017 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AM402_RS12720 8b6b441a49ab2554dc437cf20f65e37d 610 SUPERFAMILY SSF53383 220 345 9.18E-25 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS12720 8b6b441a49ab2554dc437cf20f65e37d 610 SUPERFAMILY SSF53383 375 488 9.18E-25 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS12720 8b6b441a49ab2554dc437cf20f65e37d 610 SUPERFAMILY SSF53383 95 175 9.18E-25 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS12720 8b6b441a49ab2554dc437cf20f65e37d 610 Gene3D G3DSA:3.40.640.10 220 423 2.6E-38 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS12720 8b6b441a49ab2554dc437cf20f65e37d 610 Gene3D G3DSA:3.40.640.10 108 175 2.6E-38 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS19855 5db77bf454f755092b91ff771f7321f4 147 Pfam PF01220 Dehydroquinase class II 7 142 2.5E-59 T 06-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM402_RS19855 5db77bf454f755092b91ff771f7321f4 147 Gene3D G3DSA:3.40.50.9100 5 146 1.6E-67 T 06-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM402_RS19855 5db77bf454f755092b91ff771f7321f4 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 74.425 T 06-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM402_RS19855 5db77bf454f755092b91ff771f7321f4 147 SUPERFAMILY SSF52304 4 146 1.27E-62 T 06-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM402_RS19855 5db77bf454f755092b91ff771f7321f4 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.3E-63 T 06-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM402_RS19855 5db77bf454f755092b91ff771f7321f4 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 06-07-2017 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM402_RS19855 5db77bf454f755092b91ff771f7321f4 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 147 9.0E-54 T 06-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM402_RS19855 5db77bf454f755092b91ff771f7321f4 147 PIRSF PIRSF001399 3 147 7.8E-61 T 06-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM402_RS13820 14c932fd6c5c2d47d2005dc16cfaaa1a 99 Pfam PF05135 Phage gp6-like head-tail connector protein 9 77 3.5E-7 T 06-07-2017 IPR021146 Phage gp6-like head-tail connector protein AM402_RS01455 603f30d1276a43f62f908a725edb1cfb 381 Pfam PF05125 Phage major capsid protein, P2 family 8 339 4.4E-143 T 06-07-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM402_RS01455 603f30d1276a43f62f908a725edb1cfb 381 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 338 4.7E-94 T 06-07-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 AM402_RS20390 e061e200625e8db6a000a85b8f388825 395 Pfam PF07690 Major Facilitator Superfamily 25 254 1.1E-17 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS20390 e061e200625e8db6a000a85b8f388825 395 Gene3D G3DSA:1.20.1250.20 212 376 6.3E-16 T 06-07-2017 AM402_RS20390 e061e200625e8db6a000a85b8f388825 395 Gene3D G3DSA:1.20.1250.20 16 194 1.8E-19 T 06-07-2017 AM402_RS20390 e061e200625e8db6a000a85b8f388825 395 SUPERFAMILY SSF103473 16 378 3.27E-41 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS18510 d1e4cab7628da3411df6e42da9a52492 515 Pfam PF05231 MASE1 11 281 4.3E-38 T 06-07-2017 IPR007895 MASE1 AM402_RS18510 d1e4cab7628da3411df6e42da9a52492 515 SUPERFAMILY SSF55874 396 506 1.83E-17 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS18510 d1e4cab7628da3411df6e42da9a52492 515 Gene3D G3DSA:3.30.565.10 398 507 8.1E-11 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS18510 d1e4cab7628da3411df6e42da9a52492 515 Pfam PF07730 Histidine kinase 317 379 2.9E-14 T 06-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM402_RS18510 d1e4cab7628da3411df6e42da9a52492 515 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 507 1.0E-7 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS18510 d1e4cab7628da3411df6e42da9a52492 515 SMART SM00387 419 509 7.4E-6 T 06-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM402_RS17155 83a8e0e9d428ffe04008ede98e494bbd 400 SUPERFAMILY SSF103473 16 392 3.53E-28 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS17155 83a8e0e9d428ffe04008ede98e494bbd 400 Pfam PF07690 Major Facilitator Superfamily 18 342 9.0E-21 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS17155 83a8e0e9d428ffe04008ede98e494bbd 400 Gene3D G3DSA:1.20.1250.20 17 189 2.8E-15 T 06-07-2017 AM402_RS08630 0fd6b1464a1b342d4cef164d105538ac 144 Gene3D G3DSA:1.25.40.10 34 112 5.0E-13 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08630 0fd6b1464a1b342d4cef164d105538ac 144 SUPERFAMILY SSF48452 31 113 1.03E-12 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08630 0fd6b1464a1b342d4cef164d105538ac 144 SMART SM00028 65 98 14.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS08630 0fd6b1464a1b342d4cef164d105538ac 144 SMART SM00028 31 64 2.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 SMART SM01134 72 233 9.1E-74 T 06-07-2017 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 06-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.9E-13 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.9E-13 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.6E-55 T 06-07-2017 IPR014036 DeoR C-terminal sensor domain AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 3.0E-24 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 SUPERFAMILY SSF100950 74 233 1.5E-30 T 06-07-2017 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 SUPERFAMILY SSF46785 3 73 1.8E-16 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 SMART SM00420 6 58 3.2E-26 T 06-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 Gene3D G3DSA:3.30.750.70 74 153 1.7E-18 T 06-07-2017 AM402_RS02995 0e5756abcafea07d19f41992cba81a5f 252 Gene3D G3DSA:1.10.10.10 2 58 6.7E-11 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS06540 86ea225d9469ca64dac23500211d4eb6 274 SMART SM00481 4 69 1.3E-14 T 06-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AM402_RS06540 86ea225d9469ca64dac23500211d4eb6 274 SUPERFAMILY SSF89550 168 253 4.05E-41 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM402_RS06540 86ea225d9469ca64dac23500211d4eb6 274 SUPERFAMILY SSF89550 1 84 4.05E-41 T 06-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM402_RS06540 86ea225d9469ca64dac23500211d4eb6 274 Pfam PF02811 PHP domain 5 139 1.1E-12 T 06-07-2017 IPR004013 PHP domain GO:0003824 AM402_RS06540 86ea225d9469ca64dac23500211d4eb6 274 Gene3D G3DSA:3.20.20.140 159 266 2.9E-35 T 06-07-2017 AM402_RS06540 86ea225d9469ca64dac23500211d4eb6 274 Gene3D G3DSA:3.20.20.140 1 89 2.9E-35 T 06-07-2017 AM402_RS01630 0836ff34bba79f1188f5e0b3cb6d92ab 167 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 161 33.57 T 06-07-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM402_RS01630 0836ff34bba79f1188f5e0b3cb6d92ab 167 Pfam PF00588 SpoU rRNA Methylase family 2 151 3.3E-28 T 06-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM402_RS01630 0836ff34bba79f1188f5e0b3cb6d92ab 167 PIRSF PIRSF029256 1 164 1.3E-66 T 06-07-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM402_RS01630 0836ff34bba79f1188f5e0b3cb6d92ab 167 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 162 6.4E-68 T 06-07-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM402_RS01630 0836ff34bba79f1188f5e0b3cb6d92ab 167 SUPERFAMILY SSF75217 1 162 4.91E-40 T 06-07-2017 IPR029028 Alpha/beta knot methyltransferases AM402_RS01630 0836ff34bba79f1188f5e0b3cb6d92ab 167 Gene3D G3DSA:3.40.1280.10 1 164 1.6E-68 T 06-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM402_RS16415 a9f42ff43391c8097ee43f19fe6cbfaf 53 SUPERFAMILY SSF47598 1 48 2.27E-11 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AM402_RS16415 a9f42ff43391c8097ee43f19fe6cbfaf 53 Pfam PF03869 Arc-like DNA binding domain 4 47 4.1E-13 T 06-07-2017 IPR005569 Arc-like DNA binding domain GO:0003677 AM402_RS16415 a9f42ff43391c8097ee43f19fe6cbfaf 53 Gene3D G3DSA:1.10.1220.10 1 48 3.5E-16 T 06-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM402_RS21265 e5ba19dbe4f968ea64eba44d92a70c72 106 Gene3D G3DSA:1.10.260.40 15 64 7.6E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 516 4.6E-55 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 Pfam PF00672 HAMP domain 196 264 4.5E-8 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 2.3E-61 T 06-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 SUPERFAMILY SSF58104 241 518 1.83E-69 T 06-07-2017 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 Gene3D G3DSA:1.10.287.950 285 489 1.6E-60 T 06-07-2017 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 SMART SM00283 270 517 1.6E-86 T 06-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM402_RS03560 4ab7389682b34f6578e1f1d4731debcb 575 Pfam PF02203 Tar ligand binding domain homologue 1 170 7.9E-8 T 06-07-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 AM402_RS15135 8ec6d97082dd17459b3473d0e22848f9 72 Gene3D G3DSA:1.20.5.780 13 68 1.5E-6 T 06-07-2017 AM402_RS15135 8ec6d97082dd17459b3473d0e22848f9 72 SUPERFAMILY SSF47598 12 66 6.89E-8 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AM402_RS15135 8ec6d97082dd17459b3473d0e22848f9 72 Pfam PF08681 Protein of unknown function (DUF1778) 14 67 5.9E-12 T 06-07-2017 IPR014795 Vibrio phage ICP1, Orf50 AM402_RS00215 25bdf8a048f62c72ed567b3ee3560e17 138 Pfam PF02316 Mu DNA-binding domain 9 65 3.3E-14 T 06-07-2017 IPR003314 Mu-type HTH domain GO:0003677 AM402_RS00215 25bdf8a048f62c72ed567b3ee3560e17 138 SUPERFAMILY SSF46955 3 66 5.86E-22 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS00215 25bdf8a048f62c72ed567b3ee3560e17 138 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 7 115 4.0E-5 T 06-07-2017 IPR010749 Protein of unknown function DUF1323 AM402_RS00215 25bdf8a048f62c72ed567b3ee3560e17 138 Gene3D G3DSA:1.10.10.10 2 74 2.0E-29 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS05915 434725d4e819bd044d6f6fde3a39e367 217 Gene3D G3DSA:3.90.870.10 10 214 4.7E-95 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AM402_RS05915 434725d4e819bd044d6f6fde3a39e367 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 3.3E-84 T 06-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS05915 434725d4e819bd044d6f6fde3a39e367 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.8E-84 T 06-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS05915 434725d4e819bd044d6f6fde3a39e367 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.212 T 06-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM402_RS05915 434725d4e819bd044d6f6fde3a39e367 217 SUPERFAMILY SSF55821 7 212 7.33E-87 T 06-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AM402_RS05105 2cfb176d28e8837fdad69f6a48aa44ee 267 Gene3D G3DSA:3.40.50.300 2 244 2.5E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05105 2cfb176d28e8837fdad69f6a48aa44ee 267 SMART SM00382 35 223 5.0E-6 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS05105 2cfb176d28e8837fdad69f6a48aa44ee 267 SUPERFAMILY SSF52540 23 236 8.41E-43 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05105 2cfb176d28e8837fdad69f6a48aa44ee 267 Pfam PF00005 ABC transporter 26 175 5.7E-22 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS01990 a467d82a598ca670fd2041e2ba9cb392 276 SUPERFAMILY SSF53927 21 274 1.47E-76 T 06-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AM402_RS01990 a467d82a598ca670fd2041e2ba9cb392 276 Pfam PF02634 FdhD/NarQ family 39 274 4.0E-69 T 06-07-2017 IPR003786 Protein FdhD GO:0016783 AM402_RS01990 a467d82a598ca670fd2041e2ba9cb392 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 275 1.6E-85 T 06-07-2017 IPR003786 Protein FdhD GO:0016783 AM402_RS01990 a467d82a598ca670fd2041e2ba9cb392 276 Gene3D G3DSA:3.10.20.10 40 127 3.4E-29 T 06-07-2017 AM402_RS01990 a467d82a598ca670fd2041e2ba9cb392 276 Gene3D G3DSA:3.40.140.10 140 274 1.0E-46 T 06-07-2017 AM402_RS01990 a467d82a598ca670fd2041e2ba9cb392 276 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 7 275 32.864 T 06-07-2017 IPR003786 Protein FdhD GO:0016783 AM402_RS01990 a467d82a598ca670fd2041e2ba9cb392 276 PIRSF PIRSF015626 4 276 3.2E-78 T 06-07-2017 IPR003786 Protein FdhD GO:0016783 AM402_RS19325 92d447d7a8d02396dcb4973488e90992 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 140 4.7E-10 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AM402_RS19325 92d447d7a8d02396dcb4973488e90992 156 Gene3D G3DSA:3.10.50.40 130 152 1.2E-15 T 06-07-2017 AM402_RS19325 92d447d7a8d02396dcb4973488e90992 156 Gene3D G3DSA:3.10.50.40 7 80 1.2E-15 T 06-07-2017 AM402_RS19325 92d447d7a8d02396dcb4973488e90992 156 SUPERFAMILY SSF54534 6 143 2.16E-32 T 06-07-2017 AM402_RS11005 bfa381972d77d65482fe876c6056eea6 385 Pfam PF00155 Aminotransferase class I and II 45 375 4.7E-37 T 06-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM402_RS11005 bfa381972d77d65482fe876c6056eea6 385 Gene3D G3DSA:3.90.1150.10 286 379 9.1E-13 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS11005 bfa381972d77d65482fe876c6056eea6 385 SUPERFAMILY SSF53383 38 379 9.25E-62 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS11005 bfa381972d77d65482fe876c6056eea6 385 Gene3D G3DSA:3.40.640.10 56 285 2.2E-56 T 06-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM402_RS20865 df947981115f3adbcdf8949d91936cb8 335 Pfam PF06834 TraU protein 37 334 5.6E-101 T 06-07-2017 IPR009649 TraU AM402_RS07525 9bd54e0842a7dd28e964524d4566aa2a 250 Gene3D G3DSA:1.10.3900.10 16 175 2.0E-56 T 06-07-2017 AM402_RS07525 9bd54e0842a7dd28e964524d4566aa2a 250 Gene3D G3DSA:2.60.440.10 176 250 4.8E-30 T 06-07-2017 IPR027462 Z ring-associated protein D, C-terminal domain AM402_RS07525 9bd54e0842a7dd28e964524d4566aa2a 250 SUPERFAMILY SSF160950 6 250 4.18E-84 T 06-07-2017 AM402_RS07525 9bd54e0842a7dd28e964524d4566aa2a 250 Pfam PF07072 Protein of unknown function (DUF1342) 22 228 4.0E-72 T 06-07-2017 IPR009777 Cell division protein ZapD AM402_RS07525 9bd54e0842a7dd28e964524d4566aa2a 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 30.939 T 06-07-2017 IPR009777 Cell division protein ZapD AM402_RS03710 640931104ccb6e71f0726d52e16e27e3 249 Gene3D G3DSA:3.40.50.720 3 246 2.9E-81 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS03710 640931104ccb6e71f0726d52e16e27e3 249 SUPERFAMILY SSF69572 2 245 1.23E-85 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM402_RS03710 640931104ccb6e71f0726d52e16e27e3 249 Pfam PF00899 ThiF family 10 243 1.3E-66 T 06-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM402_RS21885 cebb0ac768a7a9c6dd505ba4bc427163 157 Gene3D G3DSA:3.40.430.10 2 156 2.8E-41 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS21885 cebb0ac768a7a9c6dd505ba4bc427163 157 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 06-07-2017 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 AM402_RS21885 cebb0ac768a7a9c6dd505ba4bc427163 157 SUPERFAMILY SSF53597 2 156 7.07E-43 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS21885 cebb0ac768a7a9c6dd505ba4bc427163 157 Pfam PF00186 Dihydrofolate reductase 2 155 4.9E-37 T 06-07-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS21885 cebb0ac768a7a9c6dd505ba4bc427163 157 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.6E-12 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS21885 cebb0ac768a7a9c6dd505ba4bc427163 157 PRINTS PR00070 Dihydrofolate reductase signature 93 107 7.6E-12 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS21885 cebb0ac768a7a9c6dd505ba4bc427163 157 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.6E-12 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS21885 cebb0ac768a7a9c6dd505ba4bc427163 157 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.6E-12 T 06-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 PRINTS PR01035 Tetracycline resistance protein signature 111 132 3.2E-7 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 PRINTS PR01035 Tetracycline resistance protein signature 84 108 3.2E-7 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 PRINTS PR01035 Tetracycline resistance protein signature 344 367 3.2E-7 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 PRINTS PR01035 Tetracycline resistance protein signature 141 163 3.2E-7 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 PRINTS PR01035 Tetracycline resistance protein signature 22 38 3.2E-7 T 06-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 Pfam PF07690 Major Facilitator Superfamily 17 242 1.1E-28 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 Gene3D G3DSA:1.20.1250.20 219 395 1.5E-26 T 06-07-2017 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 Gene3D G3DSA:1.20.1250.20 10 194 8.5E-35 T 06-07-2017 AM402_RS16945 c1663fd5b27ab8a68cb3e560d18a3992 400 SUPERFAMILY SSF103473 10 395 3.66E-65 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS06085 355937884997193f5e385edfcb767c6b 212 PIRSF PIRSF004525 6 212 5.8E-47 T 06-07-2017 IPR016419 Prepilin peptidase-dependent protein B, predicted AM402_RS14060 bacd3307430b2e6e6306a660b30b39ef 106 Pfam PF05135 Phage gp6-like head-tail connector protein 1 101 7.8E-19 T 06-07-2017 IPR021146 Phage gp6-like head-tail connector protein AM402_RS03085 01f8d7328cafaf43988e5edb9a25f65f 192 Gene3D G3DSA:3.10.129.10 117 179 2.0E-33 T 06-07-2017 IPR029069 HotDog domain AM402_RS03085 01f8d7328cafaf43988e5edb9a25f65f 192 Gene3D G3DSA:3.10.129.10 21 80 2.0E-33 T 06-07-2017 IPR029069 HotDog domain AM402_RS03085 01f8d7328cafaf43988e5edb9a25f65f 192 Pfam PF07977 FabA-like domain 25 82 1.7E-12 T 06-07-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AM402_RS03085 01f8d7328cafaf43988e5edb9a25f65f 192 SUPERFAMILY SSF54637 20 85 8.51E-20 T 06-07-2017 IPR029069 HotDog domain AM402_RS03085 01f8d7328cafaf43988e5edb9a25f65f 192 SUPERFAMILY SSF54637 121 182 8.51E-20 T 06-07-2017 IPR029069 HotDog domain AM402_RS07445 6ccee74c064fc368a45371bcd4230e2e 360 Gene3D G3DSA:3.40.50.2000 258 341 4.3E-7 T 06-07-2017 AM402_RS07445 6ccee74c064fc368a45371bcd4230e2e 360 Gene3D G3DSA:3.40.50.2000 4 196 4.0E-75 T 06-07-2017 AM402_RS07445 6ccee74c064fc368a45371bcd4230e2e 360 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 1.6E-48 T 06-07-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS07445 6ccee74c064fc368a45371bcd4230e2e 360 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 358 35.179 T 06-07-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS07445 6ccee74c064fc368a45371bcd4230e2e 360 SUPERFAMILY SSF53756 6 359 2.3E-125 T 06-07-2017 AM402_RS07445 6ccee74c064fc368a45371bcd4230e2e 360 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 354 6.9E-114 T 06-07-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM402_RS07445 6ccee74c064fc368a45371bcd4230e2e 360 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 347 1.2E-37 T 06-07-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AM402_RS05350 9e41daf00ddef4d176bfa11855fe4874 298 Pfam PF06586 TraK protein 63 275 3.2E-15 T 06-07-2017 IPR010563 Pilus assembly TraK AM402_RS20900 1d113f11c737a5b26d1fc91ac47db4d8 1843 Pfam PF13750 Bacterial Ig-like domain (group 3) 556 712 1.7E-59 T 06-07-2017 IPR022038 Bacterial Ig-like domain AM402_RS20900 1d113f11c737a5b26d1fc91ac47db4d8 1843 Pfam PF13752 Domain of unknown function (DUF4165) 22 143 3.1E-60 T 06-07-2017 IPR025429 Domain of unknown function DUF4165 AM402_RS20900 1d113f11c737a5b26d1fc91ac47db4d8 1843 Pfam PF12245 Bacterial Ig-like domain (group 3) 216 250 4.9E-7 T 06-07-2017 IPR022038 Bacterial Ig-like domain AM402_RS07820 7ca8e37f83519b52d66c955adfb7dcbc 342 PIRSF PIRSF018494 1 342 6.6E-153 T 06-07-2017 IPR030935 Phage portal protein PBSX family, Proteobacteria AM402_RS07820 7ca8e37f83519b52d66c955adfb7dcbc 342 Pfam PF04860 Phage portal protein 86 335 4.5E-15 T 06-07-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein AM402_RS07820 7ca8e37f83519b52d66c955adfb7dcbc 342 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 50 332 2.0E-83 T 06-07-2017 IPR006430 Phage portal protein PBSX family AM402_RS03200 b533e0d9113f7f63c5e00d250382d943 227 Gene3D G3DSA:3.40.50.10070 50 133 6.6E-6 T 06-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM402_RS03200 b533e0d9113f7f63c5e00d250382d943 227 Pfam PF03783 Curli production assembly/transport component CsgG 47 224 8.8E-32 T 06-07-2017 IPR005534 Curli production assembly/transport component CsgG GO:0030288 AM402_RS03200 b533e0d9113f7f63c5e00d250382d943 227 SUPERFAMILY SSF52964 67 148 2.35E-8 T 06-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM402_RS12165 4577103d0283572f54dedf5dd1969c0a 208 SMART SM00900 100 192 1.2E-31 T 06-07-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 AM402_RS12165 4577103d0283572f54dedf5dd1969c0a 208 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 189 7.7E-64 T 06-07-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM402_RS12165 4577103d0283572f54dedf5dd1969c0a 208 Pfam PF04205 FMN-binding domain 100 187 3.1E-17 T 06-07-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 AM402_RS12165 4577103d0283572f54dedf5dd1969c0a 208 PIRSF PIRSF006091 2 205 9.7E-70 T 06-07-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM402_RS12165 4577103d0283572f54dedf5dd1969c0a 208 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 25.451 T 06-07-2017 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM402_RS16565 d2f5b63aaa75ef97a08412d8fd919fb8 115 Gene3D G3DSA:1.10.8.320 23 61 7.8E-5 T 06-07-2017 AM402_RS16565 d2f5b63aaa75ef97a08412d8fd919fb8 115 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 11 48 5.0E-7 T 06-07-2017 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain AM402_RS04820 887fa4697d13678b1b4312d0f4a84c6b 480 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 51 473 1.3E-156 T 06-07-2017 IPR021204 Integrating conjugative element protein, PFL4711 AM402_RS19975 31deacc7be0aed8cf4300183019683ce 325 PIRSF PIRSF003097 25 321 2.5E-85 T 06-07-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AM402_RS19975 31deacc7be0aed8cf4300183019683ce 325 Pfam PF02687 FtsX-like permease family 201 312 2.6E-10 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AM402_RS00350 d2f103af4500fe75bfe125a6ee347c0a 105 PIRSF PIRSF003135 1 102 7.2E-46 T 06-07-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM402_RS00350 d2f103af4500fe75bfe125a6ee347c0a 105 Hamap MF_00720 Primosomal replication protein n [priB]. 2 101 28.756 T 06-07-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM402_RS00350 d2f103af4500fe75bfe125a6ee347c0a 105 Pfam PF00436 Single-strand binding protein family 4 85 1.1E-10 T 06-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM402_RS00350 d2f103af4500fe75bfe125a6ee347c0a 105 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 4 100 1.1E-36 T 06-07-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 AM402_RS00350 d2f103af4500fe75bfe125a6ee347c0a 105 Gene3D G3DSA:2.40.50.140 3 104 6.3E-39 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00350 d2f103af4500fe75bfe125a6ee347c0a 105 SUPERFAMILY SSF50249 3 104 4.46E-28 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS00655 6d6fef9e68c614b43d268319ae5e4005 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 4.3E-159 T 06-07-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AM402_RS00655 6d6fef9e68c614b43d268319ae5e4005 293 Pfam PF00483 Nucleotidyl transferase 2 238 5.9E-71 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM402_RS00655 6d6fef9e68c614b43d268319ae5e4005 293 SUPERFAMILY SSF53448 1 286 6.72E-93 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS00655 6d6fef9e68c614b43d268319ae5e4005 293 Gene3D G3DSA:3.90.550.10 1 265 5.0E-68 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS13700 5193a60a7acde04afe1073d3f58d4403 51 Pfam PF01527 Transposase 4 49 8.2E-8 T 06-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM402_RS13700 5193a60a7acde04afe1073d3f58d4403 51 Gene3D G3DSA:1.10.10.60 12 50 1.6E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS13700 5193a60a7acde04afe1073d3f58d4403 51 SUPERFAMILY SSF46689 6 49 3.94E-7 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS02730 fdddb3b1cb9a63a8b9b60c6affd7d3d6 518 Pfam PF02378 Phosphotransferase system, EIIC 15 356 3.5E-54 T 06-07-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM402_RS02730 fdddb3b1cb9a63a8b9b60c6affd7d3d6 518 Gene3D G3DSA:3.30.1360.60 439 517 2.0E-19 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS02730 fdddb3b1cb9a63a8b9b60c6affd7d3d6 518 Pfam PF00367 phosphotransferase system, EIIB 446 476 3.3E-10 T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS02730 fdddb3b1cb9a63a8b9b60c6affd7d3d6 518 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 455 472 - T 06-07-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM402_RS02730 fdddb3b1cb9a63a8b9b60c6affd7d3d6 518 SUPERFAMILY SSF55604 442 515 1.83E-15 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS02730 fdddb3b1cb9a63a8b9b60c6affd7d3d6 518 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 415 481 4.4E-14 T 06-07-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM402_RS13840 03dc27ed36b75187b4e11ba10a999775 577 Pfam PF03354 Phage Terminase 89 558 5.7E-73 T 06-07-2017 IPR005021 Phage terminase AM402_RS18555 5a87d46b37006a7bb5aa37ce339655df 98 SMART SM00530 14 69 1.4E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS18555 5a87d46b37006a7bb5aa37ce339655df 98 SUPERFAMILY SSF47413 5 76 4.9E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18555 5a87d46b37006a7bb5aa37ce339655df 98 Gene3D G3DSA:1.10.260.40 7 79 6.3E-18 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS18555 5a87d46b37006a7bb5aa37ce339655df 98 Pfam PF01381 Helix-turn-helix 15 67 3.9E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS09690 43c1e6eefe61b7fccfd4e41e2830a886 218 Pfam PF13144 Chaperone for flagella basal body P-ring formation 26 216 8.7E-42 T 06-07-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AM402_RS09690 43c1e6eefe61b7fccfd4e41e2830a886 218 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 83 216 3.2E-36 T 06-07-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AM402_RS09690 43c1e6eefe61b7fccfd4e41e2830a886 218 SMART SM00858 94 156 0.0097 T 06-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 AM402_RS10075 c2e44c4eaa03dad9091c91315108874a 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 1.3E-23 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS10075 c2e44c4eaa03dad9091c91315108874a 402 Pfam PF12323 Helix-turn-helix domain 1 48 8.3E-16 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS10075 c2e44c4eaa03dad9091c91315108874a 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 3.5E-10 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS10075 c2e44c4eaa03dad9091c91315108874a 402 Pfam PF01385 Probable transposase 162 275 8.0E-29 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS12580 ddac37814473ff9541a1110b60fa327c 314 SUPERFAMILY SSF53850 105 284 4.83E-11 T 06-07-2017 AM402_RS12580 ddac37814473ff9541a1110b60fa327c 314 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 43 314 3.1E-52 T 06-07-2017 IPR005064 Bordetella uptake gene GO:0030288 AM402_RS12580 ddac37814473ff9541a1110b60fa327c 314 PIRSF PIRSF017082 2 314 3.9E-77 T 06-07-2017 IPR005064 Bordetella uptake gene GO:0030288 AM402_RS21770 ef7d144d1b18700b7925e22a566f3be1 1009 Pfam PF13700 Domain of unknown function (DUF4158) 11 172 3.8E-39 T 06-07-2017 IPR025296 Domain of unknown function DUF4158 AM402_RS21770 ef7d144d1b18700b7925e22a566f3be1 1009 Pfam PF01526 Tn3 transposase DDE domain 596 988 1.1E-111 T 06-07-2017 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM402_RS10870 d6b04be362f2c0d5e55aeff12e09bd2e 301 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 277 1.1E-114 T 06-07-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AM402_RS10870 d6b04be362f2c0d5e55aeff12e09bd2e 301 Gene3D G3DSA:3.90.550.10 9 287 7.8E-70 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS10870 d6b04be362f2c0d5e55aeff12e09bd2e 301 SUPERFAMILY SSF53448 8 292 9.91E-63 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS10870 d6b04be362f2c0d5e55aeff12e09bd2e 301 Pfam PF00483 Nucleotidyl transferase 10 278 1.8E-27 T 06-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM402_RS14355 488c37bda87b320a1a45e8379a0baeff 116 Pfam PF01230 HIT domain 12 108 5.1E-30 T 06-07-2017 IPR001310 Histidine triad (HIT) protein AM402_RS14355 488c37bda87b320a1a45e8379a0baeff 116 SUPERFAMILY SSF54197 2 112 1.7E-35 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 AM402_RS14355 488c37bda87b320a1a45e8379a0baeff 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 06-07-2017 IPR019808 Histidine triad, conserved site AM402_RS14355 488c37bda87b320a1a45e8379a0baeff 116 Gene3D G3DSA:3.30.428.10 3 110 5.2E-37 T 06-07-2017 IPR011146 HIT-like domain GO:0003824 AM402_RS14355 488c37bda87b320a1a45e8379a0baeff 116 PRINTS PR00332 Histidine triad family signature 6 22 7.2E-20 T 06-07-2017 IPR001310 Histidine triad (HIT) protein AM402_RS14355 488c37bda87b320a1a45e8379a0baeff 116 PRINTS PR00332 Histidine triad family signature 95 105 7.2E-20 T 06-07-2017 IPR001310 Histidine triad (HIT) protein AM402_RS14355 488c37bda87b320a1a45e8379a0baeff 116 PRINTS PR00332 Histidine triad family signature 27 45 7.2E-20 T 06-07-2017 IPR001310 Histidine triad (HIT) protein AM402_RS03595 f40c9cc94563b79c7b8ba1ab19035288 72 Pfam PF04102 SlyX 7 72 8.7E-23 T 06-07-2017 IPR007236 SlyX AM402_RS03595 f40c9cc94563b79c7b8ba1ab19035288 72 Gene3D G3DSA:1.20.5.300 4 52 9.2E-18 T 06-07-2017 AM402_RS03595 f40c9cc94563b79c7b8ba1ab19035288 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 15.948 T 06-07-2017 IPR007236 SlyX AM402_RS16180 77c73b809f6427e04f23947354406818 238 SUPERFAMILY SSF54292 1 106 8.86E-32 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS16180 77c73b809f6427e04f23947354406818 238 Gene3D G3DSA:1.10.1060.10 107 236 4.1E-48 T 06-07-2017 AM402_RS16180 77c73b809f6427e04f23947354406818 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 7.2E-10 T 06-07-2017 AM402_RS16180 77c73b809f6427e04f23947354406818 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 3.5E-90 T 06-07-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16180 77c73b809f6427e04f23947354406818 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 3.6E-32 T 06-07-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM402_RS16180 77c73b809f6427e04f23947354406818 238 SUPERFAMILY SSF46548 107 235 1.66E-39 T 06-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AM402_RS16180 77c73b809f6427e04f23947354406818 238 Gene3D G3DSA:3.10.20.30 1 106 1.1E-37 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS16180 77c73b809f6427e04f23947354406818 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 06-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM402_RS06660 d91f46fc975ab5aaea70ef73ba64c68e 421 Pfam PF06545 Protein of unknown function (DUF1116) 87 302 3.8E-99 T 06-07-2017 IPR009499 Protein of unknown function DUF1116 AM402_RS06660 d91f46fc975ab5aaea70ef73ba64c68e 421 Gene3D G3DSA:1.10.10.660 39 99 9.2E-36 T 06-07-2017 IPR024033 Uncharacterised domain, YlbE AM402_RS06660 d91f46fc975ab5aaea70ef73ba64c68e 421 Gene3D G3DSA:3.90.1700.10 250 417 4.7E-78 T 06-07-2017 AM402_RS06660 d91f46fc975ab5aaea70ef73ba64c68e 421 Gene3D G3DSA:3.90.1710.10 100 248 3.9E-71 T 06-07-2017 AM402_RS19835 0d159509fda05758e51130ca23cb44ab 164 PIRSF PIRSF018472 3 164 2.6E-50 T 06-07-2017 IPR026034 Cell shape-determining protein MreD, proteobacterial type AM402_RS19835 0d159509fda05758e51130ca23cb44ab 164 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 156 9.0E-38 T 06-07-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM402_RS19835 0d159509fda05758e51130ca23cb44ab 164 Pfam PF04093 rod shape-determining protein MreD 7 157 2.3E-34 T 06-07-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM402_RS09990 5d5b00436d8e7c707c192755d7f18046 450 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 421 2.4E-122 T 06-07-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM402_RS09990 5d5b00436d8e7c707c192755d7f18046 450 Pfam PF05525 Branched-chain amino acid transport protein 4 433 8.4E-133 T 06-07-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM402_RS16505 188a59384fdb844014405b8f430f9ae3 153 Pfam PF03245 Bacteriophage Rz lysis protein 37 151 2.2E-19 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 Pfam PF03222 Tryptophan/tyrosine permease family 9 401 1.4E-142 T 06-07-2017 IPR018227 Tryptophan/tyrosine permease GO:0003333 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PIRSF PIRSF006060 5 412 7.0E-10 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 394 3.9E-144 T 06-07-2017 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 45 64 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 326 344 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 90 110 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 292 311 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 347 366 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 18 41 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 154 174 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 192 214 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS14520 90b18307a4d921b289886671b21adebc 413 PRINTS PR00166 Aromatic amino acid permease signature 231 250 5.8E-99 T 06-07-2017 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 AM402_RS11030 ce819fc8a1979ee5429d73dddf564668 416 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 1.0E-70 T 06-07-2017 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM402_RS06440 745108df35a424ff9da162901f6db074 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.4E-32 T 06-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM402_RS06440 745108df35a424ff9da162901f6db074 120 PIRSF PIRSF006113 1 120 1.3E-52 T 06-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM402_RS06440 745108df35a424ff9da162901f6db074 120 Gene3D G3DSA:3.30.479.10 2 120 5.4E-39 T 06-07-2017 AM402_RS06440 745108df35a424ff9da162901f6db074 120 SUPERFAMILY SSF55620 1 119 7.23E-39 T 06-07-2017 AM402_RS06440 745108df35a424ff9da162901f6db074 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.5E-32 T 06-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM402_RS21285 0a0be036e4f0397c62a2747ce23163d9 76 SUPERFAMILY SSF103661 9 34 7.85E-5 T 06-07-2017 AM402_RS04700 07f59b0ebe34b42519b145fc158e82f4 662 Pfam PF00593 TonB dependent receptor 428 654 9.1E-18 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS04700 07f59b0ebe34b42519b145fc158e82f4 662 Gene3D G3DSA:2.40.170.20 151 662 2.2E-62 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS04700 07f59b0ebe34b42519b145fc158e82f4 662 Gene3D G3DSA:2.170.130.10 26 150 1.2E-23 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS04700 07f59b0ebe34b42519b145fc158e82f4 662 SUPERFAMILY SSF56935 28 662 5.8E-85 T 06-07-2017 AM402_RS04700 07f59b0ebe34b42519b145fc158e82f4 662 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 149 5.9E-10 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS04700 07f59b0ebe34b42519b145fc158e82f4 662 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 39 - T 06-07-2017 IPR010916 TonB box, conserved site AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 Pfam PF00285 Citrate synthase, C-terminal domain 45 409 9.3E-132 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 06-07-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 Gene3D G3DSA:1.10.580.10 51 279 1.6E-96 T 06-07-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 419 2.4E-235 T 06-07-2017 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 Gene3D G3DSA:1.10.230.10 280 372 7.8E-44 T 06-07-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 PRINTS PR00143 Citrate synthase signature 295 315 3.5E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 PRINTS PR00143 Citrate synthase signature 164 177 3.5E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 PRINTS PR00143 Citrate synthase signature 240 268 3.5E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 PRINTS PR00143 Citrate synthase signature 218 233 3.5E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 PRINTS PR00143 Citrate synthase signature 358 374 3.5E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 PRINTS PR00143 Citrate synthase signature 378 392 3.5E-56 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 PIRSF PIRSF001369 37 427 1.6E-172 T 06-07-2017 IPR024176 Citrate synthase, bacterial-type AM402_RS16200 26828973b8a563eba15c03888008f5d2 427 SUPERFAMILY SSF48256 5 421 4.19E-167 T 06-07-2017 IPR002020 Citrate synthase GO:0046912 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 8 27 4.8E-64 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 186 211 4.8E-64 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 27 47 4.8E-64 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 162 183 4.8E-64 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 47 66 4.8E-64 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 141 161 4.8E-64 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 Pfam PF00813 FliP family 10 208 9.5E-62 T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 189 201 - T 06-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM402_RS04190 b61aa8c13092cf4b2ad4f80c860589fb 219 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 7 208 1.1E-75 T 06-07-2017 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 AM402_RS02410 a7d36535a3624558cba20e79c73e8aa3 230 SUPERFAMILY SSF100950 43 228 5.44E-34 T 06-07-2017 AM402_RS02410 a7d36535a3624558cba20e79c73e8aa3 230 Gene3D G3DSA:3.40.50.10420 44 228 1.4E-38 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AM402_RS02410 a7d36535a3624558cba20e79c73e8aa3 230 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 58 227 9.4E-27 T 06-07-2017 IPR003741 LUD domain AM402_RS00335 a49c9bf8469e49426c1420cb9b14429f 219 Pfam PF08525 Opacity-associated protein A N-terminal motif 29 55 1.6E-7 T 06-07-2017 IPR013731 Opacity-associated protein A, N-terminal AM402_RS00335 a49c9bf8469e49426c1420cb9b14429f 219 Pfam PF04225 Opacity-associated protein A LysM-like domain 134 218 4.4E-28 T 06-07-2017 IPR007340 Opacity-associated protein A AM402_RS06655 98e863cf45a800b67de86fd90abcc647 555 SUPERFAMILY SSF52210 186 317 1.7E-18 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS06655 98e863cf45a800b67de86fd90abcc647 555 Pfam PF02629 CoA binding domain 194 286 4.7E-11 T 06-07-2017 IPR003781 CoA-binding GO:0048037 AM402_RS06655 98e863cf45a800b67de86fd90abcc647 555 Pfam PF00549 CoA-ligase 336 490 4.9E-49 T 06-07-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS06655 98e863cf45a800b67de86fd90abcc647 555 Gene3D G3DSA:3.40.50.261 166 292 1.1E-17 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS06655 98e863cf45a800b67de86fd90abcc647 555 SUPERFAMILY SSF52210 339 494 4.84E-6 T 06-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM402_RS13530 448755022d49267caf949847afbe19e3 299 Pfam PF05425 Copper resistance protein D 193 292 1.2E-15 T 06-07-2017 IPR008457 Copper resistance protein D GO:0016021 AM402_RS07350 a0e7872345dc4dc4a5df0d5827a3da7b 225 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 225 149.593 T 06-07-2017 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AM402_RS07350 a0e7872345dc4dc4a5df0d5827a3da7b 225 SUPERFAMILY SSF52980 6 223 1.88E-78 T 06-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM402_RS07350 a0e7872345dc4dc4a5df0d5827a3da7b 225 Pfam PF02976 DNA mismatch repair enzyme MutH 56 154 3.3E-32 T 06-07-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM402_RS07350 a0e7872345dc4dc4a5df0d5827a3da7b 225 SMART SM00927 56 154 9.4E-59 T 06-07-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM402_RS07350 a0e7872345dc4dc4a5df0d5827a3da7b 225 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 8 222 1.5E-107 T 06-07-2017 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AM402_RS07350 a0e7872345dc4dc4a5df0d5827a3da7b 225 Gene3D G3DSA:3.40.600.10 6 223 4.5E-79 T 06-07-2017 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AM402_RS00310 bc5187227452dcee2a86e7f39b846e17 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 4.0E-25 T 06-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM402_RS00310 bc5187227452dcee2a86e7f39b846e17 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 6.5E-27 T 06-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AM402_RS00310 bc5187227452dcee2a86e7f39b846e17 206 Gene3D G3DSA:3.10.50.40 89 205 7.2E-51 T 06-07-2017 AM402_RS00310 bc5187227452dcee2a86e7f39b846e17 206 Gene3D G3DSA:1.10.287.460 3 88 9.8E-25 T 06-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM402_RS00310 bc5187227452dcee2a86e7f39b846e17 206 SUPERFAMILY SSF54534 9 205 1.81E-56 T 06-07-2017 AM402_RS13025 adf3040f8be75f6df6719f2a52c71249 261 SUPERFAMILY SSF81345 3 255 1.31E-39 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS13025 adf3040f8be75f6df6719f2a52c71249 261 Pfam PF00950 ABC 3 transport family 2 257 5.7E-83 T 06-07-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM402_RS13025 adf3040f8be75f6df6719f2a52c71249 261 Gene3D G3DSA:1.10.3470.10 43 239 4.6E-10 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS09975 8f7a26eb14b3932a6736b6f9a76b37f8 74 SUPERFAMILY SSF46575 1 72 7.85E-31 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS09975 8f7a26eb14b3932a6736b6f9a76b37f8 74 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 74 5.0E-24 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS09975 8f7a26eb14b3932a6736b6f9a76b37f8 74 Gene3D G3DSA:1.10.1110.10 1 74 8.2E-37 T 06-07-2017 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS09975 8f7a26eb14b3932a6736b6f9a76b37f8 74 Pfam PF06440 DNA polymerase III, theta subunit 3 70 1.4E-37 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS07050 8f0025e60e9aa27a6e970b86461de445 295 Gene3D G3DSA:3.10.310.10 12 132 4.2E-36 T 06-07-2017 AM402_RS07050 8f0025e60e9aa27a6e970b86461de445 295 SUPERFAMILY SSF54506 13 293 1.67E-63 T 06-07-2017 AM402_RS07050 8f0025e60e9aa27a6e970b86461de445 295 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 13 295 4.9E-58 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM402_RS07050 8f0025e60e9aa27a6e970b86461de445 295 Gene3D G3DSA:3.10.310.10 136 284 3.5E-37 T 06-07-2017 AM402_RS07050 8f0025e60e9aa27a6e970b86461de445 295 PIRSF PIRSF016184 10 295 2.8E-72 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM402_RS07050 8f0025e60e9aa27a6e970b86461de445 295 Pfam PF02567 Phenazine biosynthesis-like protein 18 287 2.3E-53 T 06-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM402_RS04125 9e8be76a30f66397fa46e27f5240b031 250 Pfam PF01514 Secretory protein of YscJ/FliF family 7 188 9.2E-16 T 06-07-2017 IPR006182 Secretory protein YscJ/FliF AM402_RS04125 9e8be76a30f66397fa46e27f5240b031 250 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 8 193 1.9E-52 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM402_RS04125 9e8be76a30f66397fa46e27f5240b031 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 79 92 1.0E-10 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM402_RS04125 9e8be76a30f66397fa46e27f5240b031 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 99 114 1.0E-10 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM402_RS04125 9e8be76a30f66397fa46e27f5240b031 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 119 132 1.0E-10 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM402_RS04125 9e8be76a30f66397fa46e27f5240b031 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 167 179 1.0E-10 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM402_RS04125 9e8be76a30f66397fa46e27f5240b031 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 27 37 1.0E-10 T 06-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM402_RS15770 f9e371e87b9c6ea6d7227dcc6886bf6a 241 PIRSF PIRSF005011 1 241 1.1E-116 T 06-07-2017 IPR023604 Uncharacterised protein family SanA AM402_RS15770 f9e371e87b9c6ea6d7227dcc6886bf6a 241 Pfam PF02698 DUF218 domain 49 167 9.3E-17 T 06-07-2017 IPR003848 Domain of unknown function DUF218 AM402_RS15770 f9e371e87b9c6ea6d7227dcc6886bf6a 241 Gene3D G3DSA:3.40.50.620 44 169 7.9E-7 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS01380 190220c3388d353d1679c75cf0aa9d7f 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 5.5E-56 T 06-07-2017 IPR006498 Tail tube protein AM402_RS01380 190220c3388d353d1679c75cf0aa9d7f 171 Pfam PF04985 Phage tail tube protein FII 4 170 1.5E-67 T 06-07-2017 IPR006498 Tail tube protein AM402_RS15605 13f4d96ccb2394da7530f3ebfb20dd43 167 Pfam PF10722 Putative bacterial sensory transduction regulator 8 134 1.5E-10 T 06-07-2017 IPR019660 Putative sensory transduction regulator YbjN AM402_RS14055 60b07e4aa7201f6c285f6c32ebae2714 111 Pfam PF05521 Phage head-tail joining protein 10 101 1.3E-12 T 06-07-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor AM402_RS14055 60b07e4aa7201f6c285f6c32ebae2714 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 9 100 7.1E-14 T 06-07-2017 IPR008767 Bacteriophage SPP1, head-tail adaptor AM402_RS20170 2ce7a3f64fa788e4c7a2bbccfa18c656 463 Pfam PF07690 Major Facilitator Superfamily 45 422 1.1E-13 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS20170 2ce7a3f64fa788e4c7a2bbccfa18c656 463 SUPERFAMILY SSF103473 17 461 6.15E-41 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS20170 2ce7a3f64fa788e4c7a2bbccfa18c656 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 2.6E-111 T 06-07-2017 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AM402_RS20170 2ce7a3f64fa788e4c7a2bbccfa18c656 463 Gene3D G3DSA:1.20.1250.20 253 457 3.3E-14 T 06-07-2017 AM402_RS20170 2ce7a3f64fa788e4c7a2bbccfa18c656 463 Gene3D G3DSA:1.20.1250.20 35 232 1.5E-13 T 06-07-2017 AM402_RS15000 cbf1f47134159e21bdfd2b132d749b04 137 SUPERFAMILY SSF51735 3 132 1.62E-43 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15000 cbf1f47134159e21bdfd2b132d749b04 137 Gene3D G3DSA:3.40.50.720 3 134 1.1E-48 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS15000 cbf1f47134159e21bdfd2b132d749b04 137 SMART SM00881 10 104 3.0E-22 T 06-07-2017 IPR003781 CoA-binding GO:0048037 AM402_RS15000 cbf1f47134159e21bdfd2b132d749b04 137 Pfam PF13380 CoA binding domain 14 129 2.5E-38 T 06-07-2017 IPR003781 CoA-binding GO:0048037 AM402_RS02780 a88014426bb87d638b3bc89a9b80cee4 231 SUPERFAMILY SSF55144 59 191 6.02E-8 T 06-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AM402_RS02780 a88014426bb87d638b3bc89a9b80cee4 231 Gene3D G3DSA:3.90.1140.10 54 188 4.2E-4 T 06-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AM402_RS06595 489e38cdba8a2e51541090507e3cc2a6 174 SUPERFAMILY SSF49401 27 174 1.09E-36 T 06-07-2017 IPR008966 Adhesion domain AM402_RS06595 489e38cdba8a2e51541090507e3cc2a6 174 Gene3D G3DSA:2.60.40.1090 26 174 6.7E-41 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06595 489e38cdba8a2e51541090507e3cc2a6 174 Pfam PF00419 Fimbrial protein 28 173 6.8E-17 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS17645 b4387fb50aafc50ee2592c0f00d973dd 184 Pfam PF11072 Protein of unknown function (DUF2859) 37 179 7.0E-51 T 06-07-2017 IPR021300 Integrating conjugative element protein, PFL4695 AM402_RS17645 b4387fb50aafc50ee2592c0f00d973dd 184 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 77 181 6.8E-40 T 06-07-2017 IPR021300 Integrating conjugative element protein, PFL4695 AM402_RS17185 bf16b3921412c32405ef6661fafebd37 416 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 4 415 7.5E-165 T 06-07-2017 IPR010520 UPF0255 family AM402_RS17185 bf16b3921412c32405ef6661fafebd37 416 SUPERFAMILY SSF53474 47 393 1.5E-48 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS17185 bf16b3921412c32405ef6661fafebd37 416 Gene3D G3DSA:3.40.50.1820 163 380 1.9E-22 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS08650 1874e5ab30dd8ecb4901db9bfabae8aa 206 PIRSF PIRSF006170 1 206 7.3E-52 T 06-07-2017 IPR026039 Uncharacterised protein family UPF0070 AM402_RS08650 1874e5ab30dd8ecb4901db9bfabae8aa 206 Gene3D G3DSA:1.25.40.10 91 199 1.1E-4 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08650 1874e5ab30dd8ecb4901db9bfabae8aa 206 SUPERFAMILY SSF48452 88 186 1.79E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS08650 1874e5ab30dd8ecb4901db9bfabae8aa 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 4.0E-49 T 06-07-2017 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 AM402_RS04850 d19625870fef5a9cac030d67809c4c5f 302 SUPERFAMILY SSF56349 19 256 2.06E-11 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS04850 d19625870fef5a9cac030d67809c4c5f 302 Pfam PF12834 Phage integrase, N-terminal 7 95 5.1E-33 T 06-07-2017 IPR024457 Putative integrase, N-terminal AM402_RS04850 d19625870fef5a9cac030d67809c4c5f 302 Gene3D G3DSA:1.10.150.130 18 95 3.3E-5 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS04850 d19625870fef5a9cac030d67809c4c5f 302 Pfam PF12835 Integrase 108 257 3.6E-57 T 06-07-2017 IPR024456 Integrase catalytic domain, putative AM402_RS04850 d19625870fef5a9cac030d67809c4c5f 302 Gene3D G3DSA:1.10.443.10 125 257 5.8E-4 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS14885 7d64be0c18e393eaf7c03358f2ab9160 208 PIRSF PIRSF006324 1 206 1.6E-53 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS14885 7d64be0c18e393eaf7c03358f2ab9160 208 Pfam PF01810 LysE type translocator 15 204 2.5E-28 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS09385 645fa8ee50e8628c2913726cb1fae8a1 395 Pfam PF04865 Baseplate J-like protein 78 197 3.0E-8 T 06-07-2017 IPR006949 Baseplate protein J-like AM402_RS06195 843b26c5237cc8d501cb975dbc03d421 182 Pfam PF07348 Syd protein (SUKH-2) 6 178 9.1E-69 T 06-07-2017 IPR009948 Syd GO:0009898 AM402_RS06195 843b26c5237cc8d501cb975dbc03d421 182 Hamap MF_01104 Protein Syd [syd]. 2 180 32.931 T 06-07-2017 IPR009948 Syd GO:0009898 AM402_RS09595 a62cd0b3560c2df487d55e142f80d32f 116 SUPERFAMILY SSF63592 1 98 1.44E-37 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS09595 a62cd0b3560c2df487d55e142f80d32f 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 99 4.3E-41 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS09595 a62cd0b3560c2df487d55e142f80d32f 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.76 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS09595 a62cd0b3560c2df487d55e142f80d32f 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 1.0E-46 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS13360 d7d1930ad122539d55940790c8d5caa0 344 Gene3D G3DSA:1.10.3470.10 21 339 1.4E-93 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS13360 d7d1930ad122539d55940790c8d5caa0 344 SUPERFAMILY SSF81345 21 336 3.14E-76 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS13360 d7d1930ad122539d55940790c8d5caa0 344 Pfam PF01032 FecCD transport family 38 337 2.7E-79 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM402_RS08680 c51e7432a6625544690d03a9127e56f8 196 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 31 196 2.0E-40 T 06-07-2017 IPR010938 Protein of unknown function DUF1131 AM402_RS08680 c51e7432a6625544690d03a9127e56f8 196 Gene3D G3DSA:2.60.460.10 29 196 2.4E-63 T 06-07-2017 AM402_RS08680 c51e7432a6625544690d03a9127e56f8 196 Pfam PF06572 Protein of unknown function (DUF1131) 26 196 1.2E-72 T 06-07-2017 IPR010938 Protein of unknown function DUF1131 AM402_RS19745 998d4dfd8c1ee2d025e391523fda2c8b 192 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 25.374 T 06-07-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM402_RS19745 998d4dfd8c1ee2d025e391523fda2c8b 192 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 184 8.7E-51 T 06-07-2017 IPR010664 Lipopolysaccharide assembly, LptC-related AM402_RS19745 998d4dfd8c1ee2d025e391523fda2c8b 192 PIRSF PIRSF028513 1 187 6.8E-35 T 06-07-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM402_RS19745 998d4dfd8c1ee2d025e391523fda2c8b 192 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 183 3.2E-51 T 06-07-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM402_RS01515 3f741dd788f07814987c7fa9af561c43 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 64 2.3E-10 T 06-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM402_RS01515 3f741dd788f07814987c7fa9af561c43 73 SUPERFAMILY SSF57716 35 71 9.27E-7 T 06-07-2017 AM402_RS10645 11e1d52d914643db5cc7bc4cd8482e81 321 Pfam PF04657 Putative inner membrane exporter, YdcZ 170 303 2.8E-17 T 06-07-2017 IPR006750 Putative inner membrane exporter, YdcZ AM402_RS10645 11e1d52d914643db5cc7bc4cd8482e81 321 Pfam PF04657 Putative inner membrane exporter, YdcZ 11 154 2.1E-30 T 06-07-2017 IPR006750 Putative inner membrane exporter, YdcZ AM402_RS05720 80e7f90e19f72cd55689e52055b4feb9 358 Pfam PF15608 PELOTA RNA binding domain 276 356 2.0E-28 T 06-07-2017 IPR028157 PELOTA RNA-binding domain AM402_RS05720 80e7f90e19f72cd55689e52055b4feb9 358 Pfam PF11202 Phosphoribosyl transferase (PRTase) 9 248 4.6E-88 T 06-07-2017 IPR011215 Phosphoribosyl transferase AM402_RS05720 80e7f90e19f72cd55689e52055b4feb9 358 PIRSF PIRSF020979 1 358 5.6E-168 T 06-07-2017 IPR011215 Phosphoribosyl transferase AM402_RS05360 ed2b2118ddec7ce6fe12998880402815 216 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 129 173 5.2E-14 T 06-07-2017 IPR014118 Type IV conjugative transfer system protein TraV AM402_RS06550 20d523b41864ecb7f5b8e885465784ee 183 Pfam PF00419 Fimbrial protein 30 182 8.2E-13 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06550 20d523b41864ecb7f5b8e885465784ee 183 Gene3D G3DSA:2.60.40.1090 28 183 1.1E-34 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06550 20d523b41864ecb7f5b8e885465784ee 183 SUPERFAMILY SSF49401 29 183 1.19E-32 T 06-07-2017 IPR008966 Adhesion domain AM402_RS15400 87e6bbc20f76347b7a4013352eaad381 333 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 313 1.4E-104 T 06-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM402_RS15400 87e6bbc20f76347b7a4013352eaad381 333 SUPERFAMILY SSF52540 46 159 1.14E-12 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15400 87e6bbc20f76347b7a4013352eaad381 333 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 326 40.886 T 06-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM402_RS15400 87e6bbc20f76347b7a4013352eaad381 333 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 14 310 5.5E-117 T 06-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM402_RS15400 87e6bbc20f76347b7a4013352eaad381 333 Gene3D G3DSA:3.40.50.300 44 108 4.8E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15400 87e6bbc20f76347b7a4013352eaad381 333 Gene3D G3DSA:3.40.50.300 155 165 4.8E-6 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11640 8d9a56c3de45d25aa11b4082404da14b 116 Gene3D G3DSA:1.20.120.600 15 113 1.2E-13 T 06-07-2017 AM402_RS01525 724920b0e5f0ef80a286b279df380675 131 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 33 129 7.0E-4 T 06-07-2017 AM402_RS05670 451345cdf8ce8fe9092069902a9898c9 86 Pfam PF04606 Ogr/Delta-like zinc finger 8 53 3.5E-16 T 06-07-2017 IPR007684 Zinc finger, Ogr/Delta-type AM402_RS12530 f9ca3306f0c066c27dd74bc58280215e 205 SUPERFAMILY SSF50475 35 176 1.76E-19 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS12530 f9ca3306f0c066c27dd74bc58280215e 205 Gene3D G3DSA:2.30.110.10 32 148 9.2E-22 T 06-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AM402_RS12530 f9ca3306f0c066c27dd74bc58280215e 205 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 124 1.4E-12 T 06-07-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM402_RS12530 f9ca3306f0c066c27dd74bc58280215e 205 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 11 205 3.9E-76 T 06-07-2017 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent AM402_RS13720 8ee91f9e370c6a7c1772637d6f8ad0b5 467 Gene3D G3DSA:1.25.40.10 79 184 2.6E-6 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS13720 8ee91f9e370c6a7c1772637d6f8ad0b5 467 Pfam PF04575 Protein of unknown function (DUF560) 168 467 5.7E-85 T 06-07-2017 IPR007655 Protein of unknown function DUF560 AM402_RS13720 8ee91f9e370c6a7c1772637d6f8ad0b5 467 SUPERFAMILY SSF48452 70 142 2.78E-7 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS16480 c2d51acd7ddb730c4a0253f0ee8242e1 458 Pfam PF13264 Domain of unknown function (DUF4055) 247 385 3.1E-39 T 06-07-2017 IPR025129 Domain of unknown function DUF4055 AM402_RS11580 c2d51acd7ddb730c4a0253f0ee8242e1 458 Pfam PF13264 Domain of unknown function (DUF4055) 247 385 3.1E-39 T 06-07-2017 IPR025129 Domain of unknown function DUF4055 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 175 310 2.2E-18 T 06-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 186 204 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 206 227 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 292 310 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 272 291 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 310 327 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 228 249 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 250 271 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 162 185 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 59 79 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 PRINTS PR01002 Flagellar protein FlgJ signature 11 31 2.2E-64 T 06-07-2017 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 SMART SM00047 157 321 1.2E-33 T 06-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 Pfam PF10135 Rod binding protein 56 102 2.4E-16 T 06-07-2017 IPR019301 Flagellar protein FlgJ, N-terminal AM402_RS09735 7371cce800191370e7a034f38dcdfdca 328 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 17 310 1.5E-97 T 06-07-2017 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AM402_RS05880 00336ca800c2e03820a3f4435a5dab03 206 SMART SM00287 22 88 5.3E-10 T 06-07-2017 IPR003646 SH3-like domain, bacterial-type AM402_RS05880 00336ca800c2e03820a3f4435a5dab03 206 Pfam PF08239 Bacterial SH3 domain 33 80 1.8E-8 T 06-07-2017 IPR003646 SH3-like domain, bacterial-type AM402_RS05880 00336ca800c2e03820a3f4435a5dab03 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 26 204 8.2E-56 T 06-07-2017 IPR016476 SH3 domain protein AM402_RS05880 00336ca800c2e03820a3f4435a5dab03 206 PIRSF PIRSF006158 1 205 1.2E-69 T 06-07-2017 IPR016476 SH3 domain protein AM402_RS03410 d695d194728ba3be0395e8073a5e1a0c 236 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 38 159 1.5E-47 T 06-07-2017 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 AM402_RS03410 d695d194728ba3be0395e8073a5e1a0c 236 Pfam PF00672 HAMP domain 166 226 1.1E-7 T 06-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM402_RS09900 9d9d2a34fba8d77bd0965635df1a221f 302 SUPERFAMILY SSF52309 34 122 3.05E-5 T 06-07-2017 AM402_RS12830 8242e711fcbba0d05336ba4c05cb113d 185 SUPERFAMILY SSF49401 48 176 1.04E-8 T 06-07-2017 IPR008966 Adhesion domain AM402_RS12830 8242e711fcbba0d05336ba4c05cb113d 185 Pfam PF00419 Fimbrial protein 45 178 1.6E-4 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS12830 8242e711fcbba0d05336ba4c05cb113d 185 Gene3D G3DSA:2.60.40.1090 36 175 1.8E-10 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06575 8446eafcfff6c6ea47550d71b0fc79aa 188 Gene3D G3DSA:2.60.40.1090 28 188 1.4E-28 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06575 8446eafcfff6c6ea47550d71b0fc79aa 188 Pfam PF00419 Fimbrial protein 30 187 9.3E-8 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS06575 8446eafcfff6c6ea47550d71b0fc79aa 188 SUPERFAMILY SSF49401 35 188 6.46E-24 T 06-07-2017 IPR008966 Adhesion domain AM402_RS14970 fb386e99e8b6b39227aae9a35c24d0ac 114 Gene3D G3DSA:3.30.160.220 59 114 6.1E-30 T 06-07-2017 IPR015051 Protein YoaG AM402_RS14970 fb386e99e8b6b39227aae9a35c24d0ac 114 SUPERFAMILY SSF103063 60 114 2.22E-18 T 06-07-2017 IPR015051 Protein YoaG AM402_RS14970 fb386e99e8b6b39227aae9a35c24d0ac 114 Pfam PF08956 Domain of unknown function (DUF1869) 59 114 8.2E-32 T 06-07-2017 IPR015051 Protein YoaG AM402_RS18655 950366bdb009e4f1f7427356730c5111 346 PIRSF PIRSF038991 1 345 4.8E-48 T 06-07-2017 IPR007820 AbrB family GO:0010468|GO:0016021 AM402_RS18655 950366bdb009e4f1f7427356730c5111 346 Pfam PF05145 Putative ammonia monooxygenase 29 332 6.7E-63 T 06-07-2017 IPR007820 AbrB family GO:0010468|GO:0016021 AM402_RS17615 218114c23d608518439e1ee8691e2b24 108 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 23 103 6.7E-28 T 06-07-2017 IPR019110 Uncharacterised protein family, RAQPRD AM402_RS17615 218114c23d608518439e1ee8691e2b24 108 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 10 105 3.4E-27 T 06-07-2017 IPR019110 Uncharacterised protein family, RAQPRD AM402_RS18605 06070e2912a373bbd70ad70fc6dd86f6 186 SUPERFAMILY SSF140478 22 159 1.31E-32 T 06-07-2017 IPR023353 LemA-like domain AM402_RS18605 06070e2912a373bbd70ad70fc6dd86f6 186 Pfam PF04011 LemA family 5 172 1.7E-39 T 06-07-2017 IPR007156 LemA AM402_RS18605 06070e2912a373bbd70ad70fc6dd86f6 186 Gene3D G3DSA:1.20.1440.20 10 174 2.5E-43 T 06-07-2017 IPR023353 LemA-like domain AM402_RS03890 a6eb463884f57728de96fd5940959de2 176 Pfam PF01475 Ferric uptake regulator family 16 136 2.5E-15 T 06-07-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM402_RS03890 a6eb463884f57728de96fd5940959de2 176 Gene3D G3DSA:1.10.10.10 9 80 1.3E-15 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS03890 a6eb463884f57728de96fd5940959de2 176 SUPERFAMILY SSF46785 9 141 5.52E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS20610 cd6743a6dd34fb569a35dac0cbe37cb8 93 Pfam PF01541 GIY-YIG catalytic domain 5 75 3.0E-15 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily AM402_RS20610 cd6743a6dd34fb569a35dac0cbe37cb8 93 SUPERFAMILY SSF82771 5 72 1.57E-12 T 06-07-2017 IPR000305 GIY-YIG nuclease superfamily AM402_RS01815 4ed163c975d33b52b5bb22c6bdea01c6 201 SUPERFAMILY SSF46689 9 78 2.64E-11 T 06-07-2017 IPR009057 Homeodomain-like GO:0003677 AM402_RS01815 4ed163c975d33b52b5bb22c6bdea01c6 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 64 8.6E-9 T 06-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM402_RS01815 4ed163c975d33b52b5bb22c6bdea01c6 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 06-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM402_RS01815 4ed163c975d33b52b5bb22c6bdea01c6 201 Gene3D G3DSA:1.10.357.10 8 186 2.5E-33 T 06-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AM402_RS01815 4ed163c975d33b52b5bb22c6bdea01c6 201 SUPERFAMILY SSF48498 88 196 1.78E-5 T 06-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM402_RS01815 4ed163c975d33b52b5bb22c6bdea01c6 201 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 201 40.287 T 06-07-2017 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AM402_RS10370 e44db4e350f2f9fd428abc47eae96cb4 131 SUPERFAMILY SSF103084 44 119 4.32E-7 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS10370 e44db4e350f2f9fd428abc47eae96cb4 131 Gene3D G3DSA:3.30.1330.70 50 120 5.9E-7 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS10370 e44db4e350f2f9fd428abc47eae96cb4 131 Pfam PF05866 Endodeoxyribonuclease RusA 49 117 1.0E-13 T 06-07-2017 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM402_RS21255 a49f50c4f91d4f0892b247f2b01b1131 182 SUPERFAMILY SSF53955 17 134 9.79E-16 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS21255 a49f50c4f91d4f0892b247f2b01b1131 182 Gene3D G3DSA:1.10.530.10 16 134 1.7E-11 T 06-07-2017 AM402_RS21255 a49f50c4f91d4f0892b247f2b01b1131 182 Pfam PF01464 Transglycosylase SLT domain 8 147 3.1E-18 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 SMART SM00228 114 185 0.19 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 SMART SM00228 210 279 8.3E-11 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 SUPERFAMILY SSF50156 87 186 1.21E-10 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 Gene3D G3DSA:2.30.42.10 95 182 2.6E-9 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 Gene3D G3DSA:2.30.42.10 206 289 4.3E-19 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 Pfam PF02163 Peptidase family M50 9 438 7.3E-84 T 06-07-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 Pfam PF13180 PDZ domain 212 286 7.0E-11 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 450 2.4E-148 T 06-07-2017 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AM402_RS06280 91ea72815b692a40046df63797c45bdc 450 SUPERFAMILY SSF50156 193 289 2.1E-19 T 06-07-2017 IPR001478 PDZ domain GO:0005515 AM402_RS11815 dc1f72405cc6e733b690c517ee415ec4 297 Gene3D G3DSA:1.10.3720.10 87 293 1.4E-20 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS11815 dc1f72405cc6e733b690c517ee415ec4 297 SUPERFAMILY SSF161098 91 278 1.05E-21 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS11815 dc1f72405cc6e733b690c517ee415ec4 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 296 2.0E-23 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS11815 dc1f72405cc6e733b690c517ee415ec4 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 15 67 7.8E-9 T 06-07-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM402_RS07030 623df887c1a6055a21457988527c11f2 208 Pfam PF04229 GrpB protein 43 200 6.3E-48 T 06-07-2017 IPR007344 GrpB/Dephospho-CoA kinase AM402_RS07030 623df887c1a6055a21457988527c11f2 208 SUPERFAMILY SSF81301 44 202 4.41E-42 T 06-07-2017 AM402_RS07030 623df887c1a6055a21457988527c11f2 208 Gene3D G3DSA:3.30.460.10 42 202 1.3E-47 T 06-07-2017 AM402_RS00590 f207ead21fac0ffbdc5c4329f9adb3db 416 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 34 367 5.4E-127 T 06-07-2017 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AM402_RS02250 3a1e1256c161ec1c3c7fb09401fa356e 508 Pfam PF06527 TniQ 4 157 5.2E-18 T 06-07-2017 IPR009492 TniQ AM402_RS02250 3a1e1256c161ec1c3c7fb09401fa356e 508 Pfam PF15978 Tn7-like transposition protein D 212 294 1.2E-8 T 06-07-2017 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl AM402_RS02250 3a1e1256c161ec1c3c7fb09401fa356e 508 Pfam PF15978 Tn7-like transposition protein D 321 445 2.4E-16 T 06-07-2017 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl AM402_RS00940 9c1ec0a0f9862cfdfa84ebd4f42edc47 101 SUPERFAMILY SSF57716 2 101 1.57E-37 T 06-07-2017 AM402_RS00940 9c1ec0a0f9862cfdfa84ebd4f42edc47 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.8E-26 T 06-07-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM402_RS00940 9c1ec0a0f9862cfdfa84ebd4f42edc47 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 06-07-2017 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM402_RS00940 9c1ec0a0f9862cfdfa84ebd4f42edc47 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.147 T 06-07-2017 IPR023036 Ribosomal protein S14, bacterial/plastid AM402_RS00940 9c1ec0a0f9862cfdfa84ebd4f42edc47 101 Gene3D G3DSA:4.10.830.10 41 101 6.3E-31 T 06-07-2017 AM402_RS12600 68c52a6231028a928361b7c9bd36d7c8 286 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 276 1.0E-87 T 06-07-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM402_RS08865 16981f2b128fadf610d50b7023140322 247 Pfam PF04333 MlaA lipoprotein 29 222 1.0E-66 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AM402_RS08865 16981f2b128fadf610d50b7023140322 247 PRINTS PR01805 VacJ lipoprotein signature 48 64 8.3E-34 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AM402_RS08865 16981f2b128fadf610d50b7023140322 247 PRINTS PR01805 VacJ lipoprotein signature 30 43 8.3E-34 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AM402_RS08865 16981f2b128fadf610d50b7023140322 247 PRINTS PR01805 VacJ lipoprotein signature 99 116 8.3E-34 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AM402_RS08865 16981f2b128fadf610d50b7023140322 247 PRINTS PR01805 VacJ lipoprotein signature 138 155 8.3E-34 T 06-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AM402_RS18680 a6a3217bb06fd3ee86218be37705650a 403 Pfam PF06792 Uncharacterised protein family (UPF0261) 8 401 1.3E-157 T 06-07-2017 IPR008322 Uncharacterised protein family UPF0261 AM402_RS18680 a6a3217bb06fd3ee86218be37705650a 403 PIRSF PIRSF033271 5 402 7.8E-170 T 06-07-2017 IPR008322 Uncharacterised protein family UPF0261 AM402_RS03425 a0b77635dad1476fca20a3eb55968230 340 Pfam PF03631 Virulence factor BrkB 66 322 1.4E-41 T 06-07-2017 IPR017039 Virulence factor BrkB AM402_RS03425 a0b77635dad1476fca20a3eb55968230 340 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 52 323 4.8E-109 T 06-07-2017 IPR005274 Inner membrane protein YhjD AM402_RS21350 75a60a25fc687fa30d23837f0935814a 308 Pfam PF02387 IncFII RepA protein family 31 304 8.6E-106 T 06-07-2017 IPR003446 Plasmid replication initiation, RepA GO:0006276 AM402_RS00550 5fca6049639db0d345cb59b088ba65aa 307 Gene3D G3DSA:1.10.150.130 14 108 7.1E-21 T 06-07-2017 IPR023109 Integrase/recombinase, N-terminal AM402_RS00550 5fca6049639db0d345cb59b088ba65aa 307 Gene3D G3DSA:1.10.443.10 122 296 1.1E-52 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS00550 5fca6049639db0d345cb59b088ba65aa 307 SUPERFAMILY SSF56349 116 300 1.44E-54 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS00550 5fca6049639db0d345cb59b088ba65aa 307 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 302 54.741 T 06-07-2017 IPR023009 Tyrosine recombinase XerC/XerD AM402_RS00550 5fca6049639db0d345cb59b088ba65aa 307 Pfam PF00589 Phage integrase family 120 288 2.1E-51 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS00550 5fca6049639db0d345cb59b088ba65aa 307 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 98 3.2E-23 T 06-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM402_RS00550 5fca6049639db0d345cb59b088ba65aa 307 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 17 304 1.5E-105 T 06-07-2017 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 AM402_RS00550 5fca6049639db0d345cb59b088ba65aa 307 SUPERFAMILY SSF47823 14 105 3.14E-9 T 06-07-2017 IPR010998 Integrase, Lambda-type, N-terminal AM402_RS20215 d6af50b0bfbbfc8c72e98dd3e7d5316c 261 SUPERFAMILY SSF88713 5 254 1.48E-100 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM402_RS20215 d6af50b0bfbbfc8c72e98dd3e7d5316c 261 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 247 45.877 T 06-07-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM402_RS20215 d6af50b0bfbbfc8c72e98dd3e7d5316c 261 Pfam PF03746 LamB/YcsF family 5 242 1.2E-102 T 06-07-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM402_RS14705 e23ad8e124ef7157912bf99c1f2d740f 419 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 4 169 5.4E-49 T 06-07-2017 IPR016913 Uncharacterised conserved protein UCP029215 AM402_RS11730 cd6d3b4700ea2e6821d1f5909125898f 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 2 65 7.0E-19 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS11730 cd6d3b4700ea2e6821d1f5909125898f 76 SUPERFAMILY SSF46575 2 73 6.02E-32 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS11730 cd6d3b4700ea2e6821d1f5909125898f 76 Pfam PF06440 DNA polymerase III, theta subunit 1 66 3.7E-36 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS11730 cd6d3b4700ea2e6821d1f5909125898f 76 Gene3D G3DSA:1.10.1110.10 1 73 5.5E-36 T 06-07-2017 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS12190 56cb32940005495b9a8cdcbb4c9dd51e 155 Pfam PF10754 Protein of unknown function (DUF2569) 18 152 1.1E-33 T 06-07-2017 IPR019690 Protein of unknown function DUF2569 AM402_RS19330 71b7f33f2b226d472f44aec3de17a28b 171 TIGRFAM TIGR00077 lspA: signal peptidase II 1 161 1.1E-53 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM402_RS19330 71b7f33f2b226d472f44aec3de17a28b 171 Pfam PF01252 Signal peptidase (SPase) II 16 157 3.0E-37 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM402_RS19330 71b7f33f2b226d472f44aec3de17a28b 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.4E-18 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM402_RS19330 71b7f33f2b226d472f44aec3de17a28b 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.4E-18 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM402_RS19330 71b7f33f2b226d472f44aec3de17a28b 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.4E-18 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM402_RS19330 71b7f33f2b226d472f44aec3de17a28b 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.696 T 06-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM402_RS11310 5286e4dfeda7cc8539c3b0414f356889 457 PIRSF PIRSF006603 3 457 7.0E-60 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM402_RS11310 5286e4dfeda7cc8539c3b0414f356889 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 48.367 T 06-07-2017 IPR022913 Multidrug resistance protein MdtK AM402_RS11310 5286e4dfeda7cc8539c3b0414f356889 457 Pfam PF01554 MatE 17 176 2.1E-34 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM402_RS11310 5286e4dfeda7cc8539c3b0414f356889 457 Pfam PF01554 MatE 244 405 1.6E-36 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM402_RS11310 5286e4dfeda7cc8539c3b0414f356889 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 1.5E-111 T 06-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM402_RS11055 e1b345471987fcae8657824de6938a2c 73 Pfam PF10769 Protein of unknown function (DUF2594) 2 73 7.5E-37 T 06-07-2017 IPR019705 Protein of unknown function DUF2594 AM402_RS02465 b305fba034caaa62799b59e9768a736d 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM402_RS02465 b305fba034caaa62799b59e9768a736d 224 SUPERFAMILY SSF51366 4 217 2.88E-76 T 06-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM402_RS02465 b305fba034caaa62799b59e9768a736d 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.3E-99 T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM402_RS02465 b305fba034caaa62799b59e9768a736d 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM402_RS02465 b305fba034caaa62799b59e9768a736d 224 Gene3D G3DSA:3.20.20.70 2 221 1.2E-95 T 06-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AM402_RS02465 b305fba034caaa62799b59e9768a736d 224 PIRSF PIRSF001461 1 224 1.7E-108 T 06-07-2017 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM402_RS02465 b305fba034caaa62799b59e9768a736d 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.6E-93 T 06-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM402_RS21405 53e0063d4c5e26fb73544eaddd526454 190 Pfam PF04986 Putative transposase 3 86 1.1E-30 T 06-07-2017 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 AM402_RS02080 fc2ea5cd90a2a3378217d7d9f250a0e3 194 SUPERFAMILY SSF144091 9 186 1.11E-26 T 06-07-2017 AM402_RS02080 fc2ea5cd90a2a3378217d7d9f250a0e3 194 Gene3D G3DSA:1.20.1540.10 10 180 2.1E-16 T 06-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM402_RS02080 fc2ea5cd90a2a3378217d7d9f250a0e3 194 Pfam PF01694 Rhomboid family 45 181 3.0E-20 T 06-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM402_RS04410 7ce7c1c2b2e4e070fb905ac5e82f70cf 377 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 39 375 1.1E-54 T 06-07-2017 IPR010327 FldB/FldC dehydratase alpha/beta subunit AM402_RS12645 7eb33bf85732b0897c4efb8fdd2d394b 375 Pfam PF12698 ABC-2 family transporter protein 26 365 2.2E-35 T 06-07-2017 AM402_RS18565 a96969f037dc32af2a5c18b57e800ced 115 SUPERFAMILY SSF49503 10 109 4.96E-13 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18565 a96969f037dc32af2a5c18b57e800ced 115 Gene3D G3DSA:2.60.40.420 11 108 3.2E-7 T 06-07-2017 IPR008972 Cupredoxin AM402_RS18565 a96969f037dc32af2a5c18b57e800ced 115 Pfam PF13473 Cupredoxin-like domain 10 110 1.3E-28 T 06-07-2017 IPR028096 EfeO-type cupredoxin-like domain AM402_RS11695 45db1b534f6dd5b0994452c58d7c0b6e 1381 Pfam PF09327 Domain of unknown function (DUF1983) 1229 1305 2.0E-23 T 06-07-2017 IPR015406 Domain of unknown function DUF1983 AM402_RS11695 45db1b534f6dd5b0994452c58d7c0b6e 1381 Pfam PF13550 Putative phage tail protein 329 491 1.4E-30 T 06-07-2017 IPR032876 Tip attachment protein J AM402_RS16360 45db1b534f6dd5b0994452c58d7c0b6e 1381 Pfam PF09327 Domain of unknown function (DUF1983) 1229 1305 2.0E-23 T 06-07-2017 IPR015406 Domain of unknown function DUF1983 AM402_RS16360 45db1b534f6dd5b0994452c58d7c0b6e 1381 Pfam PF13550 Putative phage tail protein 329 491 1.4E-30 T 06-07-2017 IPR032876 Tip attachment protein J AM402_RS08060 a5c4eb12943d6f164b6e6f163b7836d1 115 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 95 2.0E-33 T 06-07-2017 IPR020483 Uncharacterised protein family YgbA AM402_RS08060 a5c4eb12943d6f164b6e6f163b7836d1 115 Pfam PF11756 Nitrous oxide-stimulated promoter 4 103 4.5E-39 T 06-07-2017 IPR020483 Uncharacterised protein family YgbA AM402_RS14040 3f405f077b5d0d66af5d5f3133fb1f63 158 Pfam PF16463 Phage tail tube protein family 12 147 5.4E-77 T 06-07-2017 IPR032493 Phage tail tube protein family AM402_RS19165 536b8a8c90f3411cd8d4298b15f06946 402 Pfam PF01385 Probable transposase 163 275 2.8E-29 T 06-07-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 AM402_RS19165 536b8a8c90f3411cd8d4298b15f06946 402 Pfam PF07282 Putative transposase DNA-binding domain 304 371 1.3E-23 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS19165 536b8a8c90f3411cd8d4298b15f06946 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 331 3.5E-10 T 06-07-2017 IPR010095 Transposase IS605, OrfB, C-terminal AM402_RS19165 536b8a8c90f3411cd8d4298b15f06946 402 Pfam PF12323 Helix-turn-helix domain 1 48 8.3E-16 T 06-07-2017 IPR021027 Transposase, putative, helix-turn-helix domain AM402_RS17980 e97bc0f678c85f632f4de1104c69c63c 170 SUPERFAMILY SSF49401 22 170 1.59E-23 T 06-07-2017 IPR008966 Adhesion domain AM402_RS17980 e97bc0f678c85f632f4de1104c69c63c 170 Gene3D G3DSA:2.60.40.1090 22 170 1.4E-22 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS01855 8003c2fd3384043c677d0db7a0bbfb99 245 SMART SM00671 82 119 47.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS01855 8003c2fd3384043c677d0db7a0bbfb99 245 SMART SM00671 46 81 5.7E-6 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS01855 8003c2fd3384043c677d0db7a0bbfb99 245 SMART SM00671 196 232 180.0 T 06-07-2017 IPR006597 Sel1-like repeat AM402_RS01855 8003c2fd3384043c677d0db7a0bbfb99 245 Gene3D G3DSA:1.25.40.10 22 114 2.8E-13 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS01855 8003c2fd3384043c677d0db7a0bbfb99 245 Gene3D G3DSA:1.25.40.10 115 231 9.1E-8 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS01855 8003c2fd3384043c677d0db7a0bbfb99 245 SUPERFAMILY SSF81901 30 230 6.89E-15 T 06-07-2017 AM402_RS08130 b70031dc4d5e49ecaa9f668d4504ab5d 679 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 149 6.6E-28 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS08130 b70031dc4d5e49ecaa9f668d4504ab5d 679 Pfam PF00593 TonB dependent receptor 414 678 5.6E-38 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS08130 b70031dc4d5e49ecaa9f668d4504ab5d 679 SUPERFAMILY SSF56935 27 679 3.5E-127 T 06-07-2017 AM402_RS08130 b70031dc4d5e49ecaa9f668d4504ab5d 679 Gene3D G3DSA:2.40.170.20 155 679 2.1E-106 T 06-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM402_RS08130 b70031dc4d5e49ecaa9f668d4504ab5d 679 Gene3D G3DSA:2.170.130.10 38 154 1.7E-40 T 06-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM402_RS15375 59c905ea627d64376970cee161b6d6f4 257 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 255 41.085 T 06-07-2017 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AM402_RS15375 59c905ea627d64376970cee161b6d6f4 257 Pfam PF13847 Methyltransferase domain 43 147 9.5E-15 T 06-07-2017 IPR025714 Methyltransferase domain AM402_RS15375 59c905ea627d64376970cee161b6d6f4 257 Gene3D G3DSA:3.40.50.150 32 254 8.7E-30 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS15375 59c905ea627d64376970cee161b6d6f4 257 SUPERFAMILY SSF53335 4 254 9.28E-37 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS09915 058e5dba84b22862a03f7defc671571b 470 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 06-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM402_RS09915 058e5dba84b22862a03f7defc671571b 470 Pfam PF00324 Amino acid permease 26 464 1.2E-117 T 06-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM402_RS09915 058e5dba84b22862a03f7defc671571b 470 PIRSF PIRSF006060 1 469 7.5E-70 T 06-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM402_RS05235 7ff46ae09ac1992a86e88750760f6c02 324 Gene3D G3DSA:3.30.420.40 4 179 6.9E-12 T 06-07-2017 AM402_RS05235 7ff46ae09ac1992a86e88750760f6c02 324 SUPERFAMILY SSF53067 1 161 5.18E-32 T 06-07-2017 AM402_RS05235 7ff46ae09ac1992a86e88750760f6c02 324 SUPERFAMILY SSF53067 168 323 9.28E-18 T 06-07-2017 AM402_RS04990 d4ad4b683ac17e919b25bc3c41bfc618 185 SUPERFAMILY SSF49401 31 182 4.1E-8 T 06-07-2017 IPR008966 Adhesion domain AM402_RS04990 d4ad4b683ac17e919b25bc3c41bfc618 185 Gene3D G3DSA:2.60.40.1090 31 180 2.9E-6 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS05265 8ab7953fc9baed33f746694ca79812fa 306 Pfam PF13280 WYL domain 136 273 1.1E-13 T 06-07-2017 IPR026881 WYL domain AM402_RS05265 8ab7953fc9baed33f746694ca79812fa 306 PIRSF PIRSF015558 16 303 3.7E-98 T 06-07-2017 IPR016634 WYL domain protein, s026 type AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 23 29 - T 06-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 SUPERFAMILY SSF53335 2 162 8.28E-60 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 SUPERFAMILY SSF53335 257 335 8.28E-60 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 273 290 1.0E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 315 335 1.0E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 19 33 1.0E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 54 74 1.0E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 292 310 1.0E-26 T 06-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 Gene3D G3DSA:3.40.50.150 254 337 1.4E-58 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 Gene3D G3DSA:3.40.50.150 2 138 1.4E-58 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS14140 bd7b3e5c4bb6e0618b1bfc3b8e6e4a30 340 Pfam PF01555 DNA methylase 20 331 2.0E-43 T 06-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AM402_RS04385 0548d3e3804edd5dea2debd2962281f2 443 Gene3D G3DSA:1.20.1250.20 239 431 4.1E-15 T 06-07-2017 AM402_RS04385 0548d3e3804edd5dea2debd2962281f2 443 Gene3D G3DSA:1.20.1250.20 16 198 8.4E-29 T 06-07-2017 AM402_RS04385 0548d3e3804edd5dea2debd2962281f2 443 Pfam PF00083 Sugar (and other) transporter 51 433 6.4E-50 T 06-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM402_RS04385 0548d3e3804edd5dea2debd2962281f2 443 SUPERFAMILY SSF103473 7 430 4.71E-73 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS12865 8809e793139b49d3906495b2564c0ea3 68 Pfam PF13617 YnbE-like lipoprotein 13 65 1.4E-24 T 06-07-2017 IPR025985 YnbE-like lipoprotein AM402_RS12865 8809e793139b49d3906495b2564c0ea3 68 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 22 68 3.0E-17 T 06-07-2017 AM402_RS08025 5d9ff27ad2004dfbddb116f568087728 182 Pfam PF03358 NADPH-dependent FMN reductase 5 143 8.8E-34 T 06-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM402_RS08025 5d9ff27ad2004dfbddb116f568087728 182 SUPERFAMILY SSF52218 5 178 1.53E-40 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS08025 5d9ff27ad2004dfbddb116f568087728 182 Gene3D G3DSA:3.40.50.360 2 178 6.3E-43 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS20515 0423ed5bb6810581be63b686aa7036a6 149 SUPERFAMILY SSF102400 1 143 6.02E-48 T 06-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM402_RS20515 0423ed5bb6810581be63b686aa7036a6 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 2.5E-39 T 06-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM402_RS20515 0423ed5bb6810581be63b686aa7036a6 149 Gene3D G3DSA:3.40.50.10110 1 143 8.2E-53 T 06-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM402_RS12980 5995896073ef538efbc73a97e952d777 110 SUPERFAMILY SSF103481 12 109 2.75E-17 T 06-07-2017 AM402_RS12980 5995896073ef538efbc73a97e952d777 110 Pfam PF00893 Small Multidrug Resistance protein 12 100 1.7E-23 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 AM402_RS18325 fcda2868ddce5b017ffb014bc9f8e0bc 264 Pfam PF00005 ABC transporter 32 169 3.9E-26 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS18325 fcda2868ddce5b017ffb014bc9f8e0bc 264 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS18325 fcda2868ddce5b017ffb014bc9f8e0bc 264 SMART SM00382 34 219 9.4E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS18325 fcda2868ddce5b017ffb014bc9f8e0bc 264 SUPERFAMILY SSF52540 9 231 3.11E-48 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS18325 fcda2868ddce5b017ffb014bc9f8e0bc 264 Gene3D G3DSA:3.40.50.300 10 240 8.3E-54 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11265 b373086f2f09a68bbb691ced00e1b8e1 142 SUPERFAMILY SSF82649 6 135 1.41E-42 T 06-07-2017 AM402_RS11265 b373086f2f09a68bbb691ced00e1b8e1 142 Gene3D G3DSA:3.90.1010.10 5 139 1.3E-49 T 06-07-2017 AM402_RS11265 b373086f2f09a68bbb691ced00e1b8e1 142 Pfam PF02657 Fe-S metabolism associated domain 14 133 3.1E-43 T 06-07-2017 IPR003808 Fe-S metabolism associated domain, SufE-like AM402_RS08480 dd742568c8d67181cd7473002d670546 82 Gene3D G3DSA:2.60.40.1090 36 76 1.7E-5 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08480 dd742568c8d67181cd7473002d670546 82 SUPERFAMILY SSF49401 38 77 9.11E-6 T 06-07-2017 IPR008966 Adhesion domain AM402_RS00370 ba5833d5a7c1ee197721cb8c8488ed96 142 Gene3D G3DSA:1.10.10.10 2 132 1.4E-37 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00370 ba5833d5a7c1ee197721cb8c8488ed96 142 Pfam PF02082 Transcriptional regulator 2 83 1.8E-23 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type AM402_RS00370 ba5833d5a7c1ee197721cb8c8488ed96 142 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.632 T 06-07-2017 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 AM402_RS00370 ba5833d5a7c1ee197721cb8c8488ed96 142 SUPERFAMILY SSF46785 2 131 9.75E-32 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS00370 ba5833d5a7c1ee197721cb8c8488ed96 142 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.1E-34 T 06-07-2017 IPR000944 Transcription regulator Rrf2-type AM402_RS08165 909f61f78276c071cc6a774b365688e6 234 SUPERFAMILY SSF100950 44 232 4.6E-34 T 06-07-2017 AM402_RS08165 909f61f78276c071cc6a774b365688e6 234 Gene3D G3DSA:3.40.50.10420 45 231 4.0E-39 T 06-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AM402_RS08165 909f61f78276c071cc6a774b365688e6 234 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 51 231 2.3E-26 T 06-07-2017 IPR003741 LUD domain AM402_RS10950 b9f679d1e79508fd0ddf36d1063768c3 306 SUPERFAMILY SSF161098 90 290 1.42E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10950 b9f679d1e79508fd0ddf36d1063768c3 306 Gene3D G3DSA:1.10.3720.10 89 302 2.9E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10950 b9f679d1e79508fd0ddf36d1063768c3 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.8E-40 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS00680 d6bb28797d11ceb2fab4d48ab5b786e4 363 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 9 350 4.5E-161 T 06-07-2017 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 AM402_RS00680 d6bb28797d11ceb2fab4d48ab5b786e4 363 Pfam PF00953 Glycosyl transferase family 4 76 234 5.2E-30 T 06-07-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AM402_RS00680 d6bb28797d11ceb2fab4d48ab5b786e4 363 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 27.983 T 06-07-2017 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 AM402_RS04205 3ef966eacdba16df35933247922353af 353 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 338 2.1E-100 T 06-07-2017 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 AM402_RS04205 3ef966eacdba16df35933247922353af 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 290 311 9.2E-27 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS04205 3ef966eacdba16df35933247922353af 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 9.2E-27 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS04205 3ef966eacdba16df35933247922353af 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 216 233 9.2E-27 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS04205 3ef966eacdba16df35933247922353af 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 196 214 9.2E-27 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS04205 3ef966eacdba16df35933247922353af 353 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 260 275 9.2E-27 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS04205 3ef966eacdba16df35933247922353af 353 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 334 7.6E-85 T 06-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM402_RS04205 3ef966eacdba16df35933247922353af 353 SUPERFAMILY SSF160544 232 338 7.19E-24 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal AM402_RS04205 3ef966eacdba16df35933247922353af 353 Gene3D G3DSA:3.40.1690.10 206 340 4.4E-41 T 06-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal AM402_RS14350 11d9c330a32e39fcca72ab59f16196f5 133 Pfam PF07233 Protein of unknown function (DUF1425) 42 131 1.2E-22 T 06-07-2017 IPR010824 Protein of unknown function DUF1425 AM402_RS09320 4e17982192a87fdc504e99fa4862ab41 99 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 96 3.9E-24 T 06-07-2017 IPR006481 Bacteriophage lambda, GpS, holin AM402_RS09320 4e17982192a87fdc504e99fa4862ab41 99 Pfam PF05106 Phage holin family (Lysis protein S) 3 95 1.7E-29 T 06-07-2017 IPR006481 Bacteriophage lambda, GpS, holin AM402_RS19875 08e163e5b551dc64cd3f68c87c8b5dbf 481 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 06-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM402_RS19875 08e163e5b551dc64cd3f68c87c8b5dbf 481 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 9.2E-106 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS19875 08e163e5b551dc64cd3f68c87c8b5dbf 481 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 4.1E-224 T 06-07-2017 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 AM402_RS19875 08e163e5b551dc64cd3f68c87c8b5dbf 481 Pfam PF00474 Sodium:solute symporter family 36 432 1.4E-128 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS10605 76ce1e45e56932ac2abbb2f4db6f8efa 135 Pfam PF12870 Domain of unknown function (DUF4878) 19 133 3.9E-35 T 06-07-2017 IPR024267 Domain of unknown function (DUF4878) AM402_RS06545 9288c11c70d69452fc6703965d95c75d 102 SMART SM00530 21 76 1.4E-11 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS06545 9288c11c70d69452fc6703965d95c75d 102 SUPERFAMILY SSF47413 15 78 1.18E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS06545 9288c11c70d69452fc6703965d95c75d 102 Pfam PF01381 Helix-turn-helix 22 75 6.2E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS06545 9288c11c70d69452fc6703965d95c75d 102 Gene3D G3DSA:1.10.260.40 15 78 1.8E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS03865 be55a5ee582400a65f46280689e3246b 169 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 167 24.115 T 06-07-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 AM402_RS03865 be55a5ee582400a65f46280689e3246b 169 Pfam PF04345 Chorismate lyase 13 169 3.8E-30 T 06-07-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 AM402_RS03865 be55a5ee582400a65f46280689e3246b 169 Gene3D G3DSA:3.40.1410.10 12 167 1.5E-53 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM402_RS03865 be55a5ee582400a65f46280689e3246b 169 SUPERFAMILY SSF64288 14 167 1.23E-43 T 06-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM402_RS10225 2967a7f3cd926aefeb40f37f22abcdfe 222 SUPERFAMILY SSF55166 16 177 6.67E-18 T 06-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 AM402_RS10225 2967a7f3cd926aefeb40f37f22abcdfe 222 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 22 177 1.4E-36 T 06-07-2017 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AM402_RS02320 194633671f588427ad6f336c3f2aafad 125 Pfam PF03899 ATP synthase I chain 13 110 7.2E-14 T 06-07-2017 IPR005598 ATP synthase protein I AM402_RS01765 2d7b965cdc6a85586b10676b4079492e 392 Gene3D G3DSA:3.40.50.2000 208 359 1.5E-9 T 06-07-2017 AM402_RS01765 2d7b965cdc6a85586b10676b4079492e 392 Pfam PF13439 Glycosyltransferase Family 4 26 191 3.8E-14 T 06-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AM402_RS01765 2d7b965cdc6a85586b10676b4079492e 392 SUPERFAMILY SSF53756 1 391 3.51E-50 T 06-07-2017 AM402_RS01765 2d7b965cdc6a85586b10676b4079492e 392 Pfam PF13692 Glycosyl transferases group 1 214 352 1.9E-20 T 06-07-2017 AM402_RS12695 3a100eb3167d5d1c3e71fde62b444462 330 Pfam PF00326 Prolyl oligopeptidase family 131 256 6.8E-10 T 06-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM402_RS12695 3a100eb3167d5d1c3e71fde62b444462 330 Gene3D G3DSA:3.40.50.1820 72 328 3.3E-27 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12695 3a100eb3167d5d1c3e71fde62b444462 330 SUPERFAMILY SSF53474 80 291 8.37E-28 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS15570 9221bf2f211da099a40013fed29dfd00 300 Pfam PF03956 Membrane protein of unknown function (DUF340) 114 298 9.7E-52 T 06-07-2017 IPR005642 Lysine exporter LysO AM402_RS15570 9221bf2f211da099a40013fed29dfd00 300 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 140 297 2.0E-57 T 06-07-2017 IPR005642 Lysine exporter LysO AM402_RS16035 e47df203c7846e87e54b5e56e4bbe050 168 Pfam PF07262 Protein of unknown function (DUF1436) 10 163 1.3E-34 T 06-07-2017 IPR009888 Immunity protein CdiI-o11 AM402_RS16035 e47df203c7846e87e54b5e56e4bbe050 168 SUPERFAMILY SSF160207 4 163 5.23E-39 T 06-07-2017 IPR023127 NMB0488-like domain AM402_RS16035 e47df203c7846e87e54b5e56e4bbe050 168 Gene3D G3DSA:3.40.1590.10 5 163 1.6E-40 T 06-07-2017 IPR023127 NMB0488-like domain AM402_RS11360 e30969abdcaee54322febd5d337c12ee 177 Pfam PF01872 RibD C-terminal domain 4 163 2.1E-17 T 06-07-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM402_RS11360 e30969abdcaee54322febd5d337c12ee 177 SUPERFAMILY SSF53597 3 175 1.7E-31 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS11360 e30969abdcaee54322febd5d337c12ee 177 Gene3D G3DSA:3.40.430.10 4 175 1.3E-30 T 06-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM402_RS00490 b82f7546294162fc59ecdf0c466991ee 342 SUPERFAMILY SSF49401 206 341 4.08E-22 T 06-07-2017 IPR008966 Adhesion domain AM402_RS00490 b82f7546294162fc59ecdf0c466991ee 342 Gene3D G3DSA:2.60.40.1090 205 341 3.8E-26 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS00490 b82f7546294162fc59ecdf0c466991ee 342 Pfam PF00419 Fimbrial protein 201 341 2.2E-12 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08755 dc1498b09b2c7c7993d22d5e951baa47 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 3.7E-19 T 06-07-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AM402_RS08755 dc1498b09b2c7c7993d22d5e951baa47 394 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 6 393 2.1E-133 T 06-07-2017 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AM402_RS08755 dc1498b09b2c7c7993d22d5e951baa47 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 393 3.1E-58 T 06-07-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AM402_RS17565 6b1d9649d26b248b5ae1b82202192003 1025 Pfam PF03895 YadA-like C-terminal region 949 1025 1.2E-14 T 06-07-2017 IPR005594 YadA-like, C-terminal AM402_RS17565 6b1d9649d26b248b5ae1b82202192003 1025 SUPERFAMILY SSF54523 933 1025 4.08E-19 T 06-07-2017 AM402_RS17565 6b1d9649d26b248b5ae1b82202192003 1025 Gene3D G3DSA:3.30.1300.30 936 1025 1.9E-20 T 06-07-2017 AM402_RS08070 465b1602ac76caa24a3627f786932bd2 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 3.4E-35 T 06-07-2017 IPR019620 Putative metal-binding protein AM402_RS08070 465b1602ac76caa24a3627f786932bd2 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 9.7E-35 T 06-07-2017 IPR019620 Putative metal-binding protein AM402_RS21935 447e990480740493ea1f28b5d9aadb23 121 Pfam PF02411 MerT mercuric transport protein 7 121 1.6E-63 T 06-07-2017 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 AM402_RS03305 e61f84504593e6f5409cb7d913937d02 205 Pfam PF03458 UPF0126 domain 5 78 6.5E-19 T 06-07-2017 IPR005115 Uncharacterised domain UPF0126 AM402_RS03305 e61f84504593e6f5409cb7d913937d02 205 Pfam PF03458 UPF0126 domain 91 162 1.2E-19 T 06-07-2017 IPR005115 Uncharacterised domain UPF0126 AM402_RS14955 5738861ac23c9bcd58a46ac1b36df0fd 101 Gene3D G3DSA:1.10.1660.10 8 94 3.2E-4 T 06-07-2017 AM402_RS14955 5738861ac23c9bcd58a46ac1b36df0fd 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 1.0E-28 T 06-07-2017 AM402_RS02425 e38daeda442db4486b2e24645a51a96d 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 3.4E-34 T 06-07-2017 IPR007436 Protein of unknown function DUF485 AM402_RS20485 c21fcf966251c05d98ab34cd961ff958 116 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 1.6E-23 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 AM402_RS07020 0e839003f96a58059516f30be679e7f2 95 Gene3D G3DSA:2.40.50.140 12 79 1.1E-4 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS09745 c4c6728ec273471f2d58cdf6f606cdae 314 SUPERFAMILY SSF64518 2 308 9.15E-53 T 06-07-2017 AM402_RS09745 c4c6728ec273471f2d58cdf6f606cdae 314 Gene3D G3DSA:1.20.1330.10 218 256 4.7E-14 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09745 c4c6728ec273471f2d58cdf6f606cdae 314 Gene3D G3DSA:1.20.1330.10 68 169 4.7E-14 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09745 c4c6728ec273471f2d58cdf6f606cdae 314 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 142 6.2E-19 T 06-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM402_RS09745 c4c6728ec273471f2d58cdf6f606cdae 314 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 191 2.8E-57 T 06-07-2017 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AM402_RS18375 79f70db31202522ecaba7228b49ceb7d 237 Gene3D G3DSA:3.40.50.150 77 198 3.0E-14 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS18375 79f70db31202522ecaba7228b49ceb7d 237 SUPERFAMILY SSF53335 79 183 9.92E-14 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS18375 79f70db31202522ecaba7228b49ceb7d 237 Pfam PF08241 Methyltransferase domain 77 125 7.7E-8 T 06-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM402_RS12325 b191246bd46f3e99ffe5add32270ed74 355 SUPERFAMILY SSF53474 243 311 1.45E-25 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12325 b191246bd46f3e99ffe5add32270ed74 355 SUPERFAMILY SSF53474 43 177 1.45E-25 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS12325 b191246bd46f3e99ffe5add32270ed74 355 Gene3D G3DSA:3.40.50.1820 42 299 1.8E-30 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS13585 a0530cfd0009c9ec8333d44055e1531c 65 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 2 59 1.5E-21 T 06-07-2017 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system AM402_RS04815 06d6e50a458ccadc1da98a6d47ca88d8 324 Pfam PF06834 TraU protein 35 313 9.0E-70 T 06-07-2017 IPR009649 TraU AM402_RS04815 06d6e50a458ccadc1da98a6d47ca88d8 324 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 29 322 3.0E-124 T 06-07-2017 IPR026331 Integrating conjugative element protein PFL_4710 AM402_RS18350 2155ead090226734fa4243fc5e31a162 803 Pfam PF16967 Fimbrial, FimD or usher-like 254 321 2.3E-24 T 06-07-2017 IPR032636 Pilus assembly protein domain AM402_RS18350 2155ead090226734fa4243fc5e31a162 803 Pfam PF15976 CS1-pili formation C-terminal 703 798 1.3E-15 T 06-07-2017 IPR031917 Pilus assembly protein, C-terminal domain AM402_RS01365 9a9312699fb1c7490154c8c0ffb089e3 944 Pfam PF10145 Phage-related minor tail protein 240 438 9.0E-47 T 06-07-2017 IPR010090 Phage tail tape measure protein AM402_RS01365 9a9312699fb1c7490154c8c0ffb089e3 944 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 198 546 7.9E-87 T 06-07-2017 IPR010090 Phage tail tape measure protein AM402_RS03980 96371a92c5c938c118aaa607b39d1d06 843 Pfam PF13953 PapC C-terminal domain 764 828 1.2E-24 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS03980 96371a92c5c938c118aaa607b39d1d06 843 Pfam PF00577 Outer membrane usher protein 190 755 2.8E-218 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS03980 96371a92c5c938c118aaa607b39d1d06 843 SUPERFAMILY SSF141729 34 154 1.06E-31 T 06-07-2017 AM402_RS03980 96371a92c5c938c118aaa607b39d1d06 843 Pfam PF13954 PapC N-terminal domain 35 177 2.9E-44 T 06-07-2017 IPR025885 PapC, N-terminal domain GO:0005515 AM402_RS04470 e98f1ae4d08b3b2d7dad34bbcabff08c 395 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 35 160 1.6E-36 T 06-07-2017 IPR007621 TPM domain AM402_RS13935 5ab8b849da5b25ed5b2babb25b2a9959 160 Gene3D G3DSA:1.10.260.40 10 58 2.7E-4 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS09965 345588e7beea7d25d68af9024860a69b 60 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.014 T 06-07-2017 IPR005371 Uncharacterised protein family UPF0181 AM402_RS09965 345588e7beea7d25d68af9024860a69b 60 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 2.3E-28 T 06-07-2017 IPR005371 Uncharacterised protein family UPF0181 AM402_RS09965 345588e7beea7d25d68af9024860a69b 60 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 4.0E-14 T 06-07-2017 IPR005371 Uncharacterised protein family UPF0181 AM402_RS10550 7bcbb5cceca3b531ae1310cfcaf5a227 238 Pfam PF02661 Fic/DOC family 51 145 3.3E-10 T 06-07-2017 IPR003812 Fido domain AM402_RS10550 7bcbb5cceca3b531ae1310cfcaf5a227 238 SUPERFAMILY SSF140931 29 191 2.62E-26 T 06-07-2017 IPR003812 Fido domain AM402_RS10550 7bcbb5cceca3b531ae1310cfcaf5a227 238 Gene3D G3DSA:1.10.3290.10 10 201 3.6E-31 T 06-07-2017 IPR003812 Fido domain AM402_RS00635 f7a0c41504c11038b9732e8e5a54449d 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 64.336 T 06-07-2017 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 AM402_RS00635 f7a0c41504c11038b9732e8e5a54449d 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 357 2.0E-175 T 06-07-2017 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 AM402_RS07920 d01b0e951e5ed5c8b83a342b42951192 115 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 24 103 4.6E-8 T 06-07-2017 IPR019289 Bacteriophage tail protein Gp41, putative AM402_RS16785 a23e1a3796f1c56847b7b0d17a630ae4 246 Gene3D G3DSA:1.10.3720.10 23 238 2.3E-42 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS16785 a23e1a3796f1c56847b7b0d17a630ae4 246 SUPERFAMILY SSF161098 24 223 4.32E-36 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS16785 a23e1a3796f1c56847b7b0d17a630ae4 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 1.2E-14 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM402_RS16785 a23e1a3796f1c56847b7b0d17a630ae4 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 238 8.8E-25 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS07085 ca81ae1a4b1559c0d7e771dffe6e848b 491 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 64 404 4.5E-86 T 06-07-2017 IPR016624 Uncharacterised conserved protein UCP014753 AM402_RS02920 c740b8d07387f2c8a118a8bef5f11a06 269 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS02920 c740b8d07387f2c8a118a8bef5f11a06 269 Pfam PF00005 ABC transporter 22 179 9.1E-26 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS02920 c740b8d07387f2c8a118a8bef5f11a06 269 SMART SM00382 31 229 7.9E-16 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS02920 c740b8d07387f2c8a118a8bef5f11a06 269 SUPERFAMILY SSF52540 4 257 3.04E-56 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS02920 c740b8d07387f2c8a118a8bef5f11a06 269 Gene3D G3DSA:3.40.50.300 3 253 3.2E-61 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS04195 177857628415abbcc4f1beacb2477165 84 PIRSF PIRSF004669 1 82 1.4E-22 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS04195 177857628415abbcc4f1beacb2477165 84 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 15 36 1.2E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS04195 177857628415abbcc4f1beacb2477165 84 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 51 73 1.2E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS04195 177857628415abbcc4f1beacb2477165 84 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 36 51 1.2E-23 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS04195 177857628415abbcc4f1beacb2477165 84 Pfam PF01313 Bacterial export proteins, family 3 4 74 1.8E-24 T 06-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM402_RS04195 177857628415abbcc4f1beacb2477165 84 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 3 79 5.1E-27 T 06-07-2017 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 AM402_RS01595 635df964648b4f23243b802929380cfe 374 SUPERFAMILY SSF53756 19 352 1.26E-31 T 06-07-2017 AM402_RS01595 635df964648b4f23243b802929380cfe 374 Gene3D G3DSA:3.40.50.2000 169 303 7.1E-6 T 06-07-2017 AM402_RS01595 635df964648b4f23243b802929380cfe 374 Pfam PF00534 Glycosyl transferases group 1 170 326 7.4E-9 T 06-07-2017 IPR001296 Glycosyl transferase, family 1 AM402_RS02985 b7d2e6e24b8de5afb131a15e132a3dc1 118 Pfam PF04343 Protein of unknown function, DUF488 4 111 8.8E-29 T 06-07-2017 IPR007438 Protein of unknown function DUF488 AM402_RS20115 101859c1cc13bbcfce54a3ee076ddf70 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 25.957 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM402_RS20115 101859c1cc13bbcfce54a3ee076ddf70 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 9.0E-37 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM402_RS20115 101859c1cc13bbcfce54a3ee076ddf70 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 2.4E-29 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM402_RS20115 101859c1cc13bbcfce54a3ee076ddf70 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 06-07-2017 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AM402_RS20115 101859c1cc13bbcfce54a3ee076ddf70 113 PIRSF PIRSF004761 1 113 1.5E-37 T 06-07-2017 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 AM402_RS08035 616dc1a77816e146a4b2813fd3436dc9 822 Gene3D G3DSA:3.10.50.40 703 821 7.9E-12 T 06-07-2017 AM402_RS08035 616dc1a77816e146a4b2813fd3436dc9 822 SUPERFAMILY SSF54534 670 822 1.1E-11 T 06-07-2017 AM402_RS02195 913a08ba1f73a970988dfe2e19cb656a 108 Gene3D G3DSA:1.10.443.10 3 90 3.6E-27 T 06-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS02195 913a08ba1f73a970988dfe2e19cb656a 108 SUPERFAMILY SSF56349 10 99 5.89E-26 T 06-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM402_RS02195 913a08ba1f73a970988dfe2e19cb656a 108 Pfam PF00589 Phage integrase family 12 88 1.4E-24 T 06-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM402_RS17975 6219034c4cf23ac7ac28344cd723ac72 179 SUPERFAMILY SSF49401 40 179 2.44E-10 T 06-07-2017 IPR008966 Adhesion domain AM402_RS17975 6219034c4cf23ac7ac28344cd723ac72 179 Gene3D G3DSA:2.60.40.1090 31 179 1.1E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS17975 6219034c4cf23ac7ac28344cd723ac72 179 Pfam PF00419 Fimbrial protein 31 178 2.9E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS07000 41834c38f3eef549ad4f92d95b672d77 346 Pfam PF07751 Abi-like protein 51 249 1.5E-50 T 06-07-2017 IPR011664 Abortive infection system protein AbiD/AbiF-like AM402_RS18725 4243b6d66c4f1af25f8af09e00671a2f 68 Pfam PF04328 Protein of unknown function (DUF466) 5 68 3.1E-28 T 06-07-2017 IPR007423 Protein of unknown function DUF466 AM402_RS21025 387eac4a7d7e026ea066d18a0ec72155 475 Pfam PF00145 C-5 cytosine-specific DNA methylase 228 320 3.3E-7 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS21025 387eac4a7d7e026ea066d18a0ec72155 475 Gene3D G3DSA:3.40.50.150 163 360 2.1E-18 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS21025 387eac4a7d7e026ea066d18a0ec72155 475 SUPERFAMILY SSF53335 188 451 1.16E-23 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS10930 9bfb3babc68e044961c1b5b1213e48e7 110 Gene3D G3DSA:2.102.10.10 2 108 1.8E-40 T 06-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM402_RS10930 9bfb3babc68e044961c1b5b1213e48e7 110 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 4.6E-39 T 06-07-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM402_RS10930 9bfb3babc68e044961c1b5b1213e48e7 110 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 3.8E-36 T 06-07-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM402_RS10930 9bfb3babc68e044961c1b5b1213e48e7 110 SUPERFAMILY SSF50022 1 108 3.64E-36 T 06-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM402_RS19600 76aeeba343c9c534fd2e67238af0d292 274 Hamap MF_01384 Urease accessory protein UreD [ureD]. 9 258 28.355 T 06-07-2017 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AM402_RS19600 76aeeba343c9c534fd2e67238af0d292 274 Pfam PF01774 UreD urease accessory protein 51 246 5.6E-47 T 06-07-2017 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AM402_RS18600 0f172cc8173ed956dc0af7bbbe27fb8d 270 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 261 2.0E-23 T 06-07-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM402_RS05210 bd7c3681fe44a8c19cb379278d63629f 178 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 42 112 2.6E-7 T 06-07-2017 IPR025159 Transcriptional regulator, AbiEi antitoxin AM402_RS14600 38a09c1d69c186be34222534a50934f7 48 Pfam PF09851 Short C-terminal domain 20 46 3.9E-9 T 06-07-2017 IPR018649 SHOCT domain AM402_RS01370 ad1946070c9c11e6345c33e58b86783f 57 Pfam PF06528 Phage P2 GpE 20 55 7.7E-19 T 06-07-2017 IPR009493 Burkholderia phage phiE202, Gp27 AM402_RS20415 d508d55c25f3c046d5a3437b717b06f2 32 Pfam PF08049 IlvB leader peptide 1 32 2.0E-18 T 06-07-2017 IPR012566 IlvB leader peptide AM402_RS13510 f0527a10a445f98f78a9ee7e0622d036 418 Pfam PF04403 Paraquat-inducible protein A 244 400 1.5E-49 T 06-07-2017 IPR007498 Paraquat-inducible protein A AM402_RS13510 f0527a10a445f98f78a9ee7e0622d036 418 Pfam PF04403 Paraquat-inducible protein A 50 201 3.6E-36 T 06-07-2017 IPR007498 Paraquat-inducible protein A AM402_RS13510 f0527a10a445f98f78a9ee7e0622d036 418 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 7 398 3.3E-146 T 06-07-2017 IPR005219 Conserved hypothetical protein CHP00155 AM402_RS03045 2f2dac9b0877e0958a349a3f26a61f11 482 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 348 480 2.5E-10 T 06-07-2017 IPR018756 Domain of unknown function DUF2314 AM402_RS03045 2f2dac9b0877e0958a349a3f26a61f11 482 Pfam PF13218 Protein of unknown function (DUF4026) 16 341 9.5E-170 T 06-07-2017 IPR025102 Protein of unknown function DUF4026 AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 Gene3D G3DSA:2.40.50.100 277 347 2.2E-18 T 06-07-2017 AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 4.1E-146 T 06-07-2017 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 Gene3D G3DSA:3.40.50.300 16 220 2.5E-55 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 Pfam PF00005 ABC transporter 16 156 1.3E-30 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 SUPERFAMILY SSF50331 239 350 8.5E-21 T 06-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 SUPERFAMILY SSF52540 8 221 1.65E-58 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 Pfam PF03459 TOBE domain 290 347 3.4E-12 T 06-07-2017 IPR005116 Transport-associated OB, type 1 AM402_RS15985 b8baafe764d89fdef26d61b5d7842c29 354 SMART SM00382 23 206 1.9E-8 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS16575 f80ff0f7baaa81fbf270660912b23d02 214 SUPERFAMILY SSF51306 116 210 1.74E-26 T 06-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AM402_RS16575 f80ff0f7baaa81fbf270660912b23d02 214 Pfam PF00717 Peptidase S24-like 123 196 1.4E-14 T 06-07-2017 IPR019759 Peptidase S24/S26A/S26B AM402_RS16575 f80ff0f7baaa81fbf270660912b23d02 214 SUPERFAMILY SSF47413 4 72 4.35E-15 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS16575 f80ff0f7baaa81fbf270660912b23d02 214 Gene3D G3DSA:2.10.109.10 116 210 1.1E-31 T 06-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AM402_RS16575 f80ff0f7baaa81fbf270660912b23d02 214 Pfam PF01381 Helix-turn-helix 12 67 7.9E-13 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS16575 f80ff0f7baaa81fbf270660912b23d02 214 Gene3D G3DSA:1.10.260.40 2 75 4.2E-19 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS16575 f80ff0f7baaa81fbf270660912b23d02 214 SMART SM00530 11 67 1.0E-14 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS16410 b6123e8c4b91b99a973e46978b33e7c2 79 SUPERFAMILY SSF47598 3 47 4.45E-16 T 06-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AM402_RS16410 b6123e8c4b91b99a973e46978b33e7c2 79 Pfam PF03869 Arc-like DNA binding domain 2 46 4.5E-19 T 06-07-2017 IPR005569 Arc-like DNA binding domain GO:0003677 AM402_RS16410 b6123e8c4b91b99a973e46978b33e7c2 79 Gene3D G3DSA:1.10.1220.10 2 72 2.7E-24 T 06-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM402_RS10960 c9996b656cda504a72003eaf28ea1faf 329 SUPERFAMILY SSF52540 40 312 3.44E-68 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10960 c9996b656cda504a72003eaf28ea1faf 329 Gene3D G3DSA:3.40.50.300 4 267 1.0E-72 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS10960 c9996b656cda504a72003eaf28ea1faf 329 SMART SM00382 39 245 5.8E-14 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS10960 c9996b656cda504a72003eaf28ea1faf 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 322 6.0E-27 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS10960 c9996b656cda504a72003eaf28ea1faf 329 Pfam PF00005 ABC transporter 31 187 3.0E-28 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS10960 c9996b656cda504a72003eaf28ea1faf 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 9.4E-22 T 06-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM402_RS10960 c9996b656cda504a72003eaf28ea1faf 329 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS00275 ef0dce445713d2054f55cc47a21322c2 1273 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 939 1273 6.1E-69 T 06-07-2017 IPR007452 Translocation and assembly module TamB AM402_RS00275 ef0dce445713d2054f55cc47a21322c2 1273 Pfam PF13502 AsmA-like C-terminal region 265 461 1.3E-5 T 06-07-2017 IPR032712 AsmA-like, C-terminal AM402_RS12385 09529d3cfd8c8bbf85d75140a6bbee49 618 Pfam PF04632 Fusaric acid resistance protein family 311 486 2.3E-24 T 06-07-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM402_RS05950 1c55e467fcd043c1bd27f29d0e21d37a 196 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 2.8E-65 T 06-07-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM402_RS05950 1c55e467fcd043c1bd27f29d0e21d37a 196 Gene3D G3DSA:3.40.50.1820 4 185 2.8E-15 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS05950 1c55e467fcd043c1bd27f29d0e21d37a 196 SUPERFAMILY SSF53474 4 188 1.74E-19 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS00095 65aa1d6a3f8de8b7a837feb03538950e 216 Pfam PF08348 YheO-like PAS domain 17 124 5.2E-32 T 06-07-2017 IPR013559 YheO-like AM402_RS00095 65aa1d6a3f8de8b7a837feb03538950e 216 Pfam PF13309 HTH domain 154 211 1.6E-13 T 06-07-2017 AM402_RS00095 65aa1d6a3f8de8b7a837feb03538950e 216 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 16 117 2.0E-42 T 06-07-2017 IPR013559 YheO-like AM402_RS16310 fa3417e7467f5d5916d31a6e9f6f19cb 46 Gene3D G3DSA:1.10.1110.10 1 46 1.2E-24 T 06-07-2017 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM402_RS16310 fa3417e7467f5d5916d31a6e9f6f19cb 46 Pfam PF06440 DNA polymerase III, theta subunit 1 46 4.1E-25 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS16310 fa3417e7467f5d5916d31a6e9f6f19cb 46 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 2 46 2.0E-12 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS16310 fa3417e7467f5d5916d31a6e9f6f19cb 46 SUPERFAMILY SSF46575 1 46 1.83E-20 T 06-07-2017 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 AM402_RS14575 dc249752bc53f4be2e554fb5edba1823 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 324 7.6E-101 T 06-07-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM402_RS14575 dc249752bc53f4be2e554fb5edba1823 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.533 T 06-07-2017 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM402_RS15810 4bd681dd4fdc2605d7147a3ed60fd760 192 SUPERFAMILY SSF102405 2 182 3.97E-60 T 06-07-2017 AM402_RS15810 4bd681dd4fdc2605d7147a3ed60fd760 192 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 182 4.1E-55 T 06-07-2017 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AM402_RS15810 4bd681dd4fdc2605d7147a3ed60fd760 192 Pfam PF03641 Possible lysine decarboxylase 49 178 7.5E-42 T 06-07-2017 IPR031100 LOG family AM402_RS15810 4bd681dd4fdc2605d7147a3ed60fd760 192 Gene3D G3DSA:3.40.50.450 2 186 1.1E-66 T 06-07-2017 AM402_RS19675 6b1495bab9e090376cda78fcbe68c98b 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 5.2E-49 T 06-07-2017 IPR009386 Protein of unknown function DUF1043 AM402_RS19675 6b1495bab9e090376cda78fcbe68c98b 134 PIRSF PIRSF006318 1 134 2.4E-50 T 06-07-2017 IPR009386 Protein of unknown function DUF1043 AM402_RS13015 8f1a2b9bab1bbab30527105f08546b52 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 309 2.9E-60 T 06-07-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM402_RS13015 8f1a2b9bab1bbab30527105f08546b52 314 PRINTS PR00690 Adhesin family signature 199 220 1.2E-8 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13015 8f1a2b9bab1bbab30527105f08546b52 314 PRINTS PR00690 Adhesin family signature 252 270 1.2E-8 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13015 8f1a2b9bab1bbab30527105f08546b52 314 PRINTS PR00690 Adhesin family signature 62 75 1.2E-8 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13015 8f1a2b9bab1bbab30527105f08546b52 314 PRINTS PR00690 Adhesin family signature 75 92 1.2E-8 T 06-07-2017 IPR006128 Adhesion lipoprotein GO:0007155 AM402_RS13015 8f1a2b9bab1bbab30527105f08546b52 314 Gene3D G3DSA:3.40.50.1980 200 312 5.1E-34 T 06-07-2017 AM402_RS13015 8f1a2b9bab1bbab30527105f08546b52 314 Gene3D G3DSA:3.40.50.1980 23 199 2.0E-43 T 06-07-2017 AM402_RS13015 8f1a2b9bab1bbab30527105f08546b52 314 SUPERFAMILY SSF53807 33 310 7.36E-77 T 06-07-2017 AM402_RS04730 5cd6ebbfaa632fbd033c375ebcd3d211 184 Pfam PF11072 Protein of unknown function (DUF2859) 37 179 4.3E-52 T 06-07-2017 IPR021300 Integrating conjugative element protein, PFL4695 AM402_RS04730 5cd6ebbfaa632fbd033c375ebcd3d211 184 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 77 181 5.8E-40 T 06-07-2017 IPR021300 Integrating conjugative element protein, PFL4695 AM402_RS10155 11e1d8603b143edb9ce5ccb7031fd605 416 SUPERFAMILY SSF103473 7 410 2.49E-40 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS10155 11e1d8603b143edb9ce5ccb7031fd605 416 Gene3D G3DSA:1.20.1250.20 198 409 1.9E-18 T 06-07-2017 AM402_RS10155 11e1d8603b143edb9ce5ccb7031fd605 416 Gene3D G3DSA:1.20.1250.20 8 193 6.7E-22 T 06-07-2017 AM402_RS10155 11e1d8603b143edb9ce5ccb7031fd605 416 Pfam PF03825 Nucleoside H+ symporter 1 402 1.2E-115 T 06-07-2017 AM402_RS20150 5e3223b279c3c55ce2035fb2e9b67c7c 225 Gene3D G3DSA:1.20.950.20 2 216 2.4E-70 T 06-07-2017 AM402_RS20150 5e3223b279c3c55ce2035fb2e9b67c7c 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 1.4E-81 T 06-07-2017 IPR023234 NarG-like domain AM402_RS20150 5e3223b279c3c55ce2035fb2e9b67c7c 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 1.1E-114 T 06-07-2017 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 AM402_RS20150 5e3223b279c3c55ce2035fb2e9b67c7c 225 SUPERFAMILY SSF103501 1 224 2.35E-70 T 06-07-2017 IPR023234 NarG-like domain AM402_RS21715 f1ef5ce3af598c2f320d65db05034dfd 202 SUPERFAMILY SSF63592 107 180 2.62E-8 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS21715 f1ef5ce3af598c2f320d65db05034dfd 202 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 108 182 0.001 T 06-07-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 AM402_RS16110 b6a8af66e57b73260f46d4b805a94df4 141 TIGRFAM TIGR02801 tolR: protein TolR 12 139 3.4E-38 T 06-07-2017 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 AM402_RS16110 b6a8af66e57b73260f46d4b805a94df4 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 140 3.7E-24 T 06-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM402_RS21200 e36747d6b3313b850c5ad16aa0a65aeb 407 Pfam PF03743 Bacterial conjugation TrbI-like protein 216 399 2.9E-57 T 06-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM402_RS16990 794b6bed75b700c8a3f4142b1f0c35c8 115 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 33 111 1.3E-9 T 06-07-2017 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein AM402_RS17840 baab036ed68a323877bbe18afc4c0ae6 103 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 19 99 4.5E-22 T 06-07-2017 IPR019110 Uncharacterised protein family, RAQPRD AM402_RS17840 baab036ed68a323877bbe18afc4c0ae6 103 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 23 97 8.0E-20 T 06-07-2017 IPR019110 Uncharacterised protein family, RAQPRD AM402_RS17785 1d1ecfcb0d9b5f1ebd76a8d2a0afa14b 132 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 19 126 3.2E-38 T 06-07-2017 IPR011090 Integrating conjugative element protein, PFL4709 AM402_RS17785 1d1ecfcb0d9b5f1ebd76a8d2a0afa14b 132 Pfam PF07511 Protein of unknown function (DUF1525) 19 124 5.8E-36 T 06-07-2017 IPR011090 Integrating conjugative element protein, PFL4709 AM402_RS17210 2c7aea12c3a0c080dc24ab7a23d31d48 290 SUPERFAMILY SSF51695 21 288 2.54E-49 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM402_RS17210 2c7aea12c3a0c080dc24ab7a23d31d48 290 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 26 282 1.3E-16 T 06-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM402_RS17210 2c7aea12c3a0c080dc24ab7a23d31d48 290 Gene3D G3DSA:3.20.20.190 18 289 1.5E-49 T 06-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM402_RS09940 b625fc35d20f6fd5c3c5bf6a4f9b9fa8 270 SUPERFAMILY SSF53335 4 252 1.92E-39 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS09940 b625fc35d20f6fd5c3c5bf6a4f9b9fa8 270 Gene3D G3DSA:3.40.50.150 71 246 6.7E-23 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS09940 b625fc35d20f6fd5c3c5bf6a4f9b9fa8 270 Pfam PF13847 Methyltransferase domain 84 205 1.3E-15 T 06-07-2017 IPR025714 Methyltransferase domain AM402_RS09940 b625fc35d20f6fd5c3c5bf6a4f9b9fa8 270 PIRSF PIRSF018249 1 270 4.7E-88 T 06-07-2017 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AM402_RS12575 74426eed151b043d6cc60178e51881d2 144 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 141 5.2E-19 T 06-07-2017 IPR009936 Protein of unknown function DUF1468 AM402_RS01445 0746fc73736a670a5595446d4f5eb02b 151 Pfam PF05926 Phage head completion protein (GPL) 16 151 3.8E-56 T 06-07-2017 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AM402_RS08055 a687fdad07adaa334b41a172f5e2081a 186 Pfam PF13302 Acetyltransferase (GNAT) domain 8 151 2.8E-33 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS08055 a687fdad07adaa334b41a172f5e2081a 186 Gene3D G3DSA:3.40.630.30 1 179 2.5E-50 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS08055 a687fdad07adaa334b41a172f5e2081a 186 SUPERFAMILY SSF55729 1 161 6.51E-39 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS01585 6ed4e975864e048197ae5a9638edd270 323 SUPERFAMILY SSF53383 25 320 2.85E-7 T 06-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AM402_RS01585 6ed4e975864e048197ae5a9638edd270 323 Gene3D G3DSA:3.90.1150.10 216 273 3.2E-4 T 06-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AM402_RS15620 6e595d24f0d8f100a9e37cc314a68d08 141 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 AM402_RS15620 6e595d24f0d8f100a9e37cc314a68d08 141 Gene3D G3DSA:2.60.120.460 1 139 1.5E-55 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 AM402_RS15620 6e595d24f0d8f100a9e37cc314a68d08 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 7 139 3.4E-42 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 AM402_RS15620 6e595d24f0d8f100a9e37cc314a68d08 141 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 2.2E-36 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 AM402_RS15620 6e595d24f0d8f100a9e37cc314a68d08 141 SUPERFAMILY SSF111038 1 139 1.05E-46 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 AM402_RS15620 6e595d24f0d8f100a9e37cc314a68d08 141 PIRSF PIRSF004681 1 139 3.8E-44 T 06-07-2017 IPR001602 Uncharacterised protein family UPF0047 AM402_RS11070 5180a3a68af57e15525f3c39e268ef37 112 SUPERFAMILY SSF81324 9 106 1.03E-5 T 06-07-2017 AM402_RS11070 5180a3a68af57e15525f3c39e268ef37 112 Gene3D G3DSA:1.10.287.70 23 105 3.7E-4 T 06-07-2017 AM402_RS04225 8221d166407538397909638d4d2ec086 348 SUPERFAMILY SSF140693 73 191 8.89E-17 T 06-07-2017 AM402_RS04225 8221d166407538397909638d4d2ec086 348 SUPERFAMILY SSF140693 229 338 8.89E-17 T 06-07-2017 AM402_RS04225 8221d166407538397909638d4d2ec086 348 Pfam PF06511 Invasion plasmid antigen IpaD 107 346 4.0E-17 T 06-07-2017 IPR009483 Invasion plasmid antigen IpaD GO:0009405 AM402_RS00040 23002a3a4a8c9482e8da77c52d766df8 387 Pfam PF12698 ABC-2 family transporter protein 23 359 1.1E-27 T 06-07-2017 AM402_RS00040 23002a3a4a8c9482e8da77c52d766df8 387 Gene3D G3DSA:3.40.1710.10 45 168 1.4E-6 T 06-07-2017 AM402_RS21515 ced873fb12e8012e47008c486b3305bb 153 Pfam PF07799 Protein of unknown function (DUF1643) 3 139 2.5E-29 T 06-07-2017 IPR012441 Protein of unknown function DUF1643 AM402_RS17655 48e94ff4e74bacc401dab84a9967054b 247 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 44 242 3.3E-71 T 06-07-2017 IPR022293 Integrating conjugative element protein, PFL4693 AM402_RS03880 8a4ce0c397327f583e4db20eb1e42d82 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 06-07-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 AM402_RS03880 8a4ce0c397327f583e4db20eb1e42d82 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 117 3.0E-35 T 06-07-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 AM402_RS03880 8a4ce0c397327f583e4db20eb1e42d82 123 Gene3D G3DSA:1.10.3830.10 3 121 1.0E-45 T 06-07-2017 AM402_RS20380 c03dcc68c15388c1a35ec42f4b6837f7 167 Pfam PF00583 Acetyltransferase (GNAT) family 60 139 7.0E-16 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS20380 c03dcc68c15388c1a35ec42f4b6837f7 167 Gene3D G3DSA:3.40.630.30 3 162 5.6E-38 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS20380 c03dcc68c15388c1a35ec42f4b6837f7 167 SUPERFAMILY SSF55729 4 163 2.4E-36 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS20505 78298d4a2a17e02a21e07138172c903c 365 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 2.8E-114 T 06-07-2017 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AM402_RS20505 78298d4a2a17e02a21e07138172c903c 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 1.0E-73 T 06-07-2017 IPR005495 Permease LptG/LptF-related GO:0016021 AM402_RS19840 7b3dd0c93fb917929e2a8e6d9498cf41 348 Pfam PF04085 rod shape-determining protein MreC 123 269 3.3E-38 T 06-07-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 AM402_RS19840 7b3dd0c93fb917929e2a8e6d9498cf41 348 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 278 1.2E-105 T 06-07-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 AM402_RS18340 501f6c2a9c76be53af8b17fcd4110696 251 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 87 212 4.0E-4 T 06-07-2017 AM402_RS18340 501f6c2a9c76be53af8b17fcd4110696 251 SUPERFAMILY SSF49354 24 137 7.63E-9 T 06-07-2017 IPR008962 PapD-like AM402_RS21240 8a10e1537160fc91dd03389bc2cd7f2f 106 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 12 95 4.0E-10 T 06-07-2017 AM402_RS21240 8a10e1537160fc91dd03389bc2cd7f2f 106 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 87 1.6E-10 T 06-07-2017 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB AM402_RS05575 3eeaf456c7b81eeaf1cfa23efd561a8f 115 Pfam PF04972 BON domain 47 113 3.2E-11 T 06-07-2017 IPR007055 BON domain AM402_RS05575 3eeaf456c7b81eeaf1cfa23efd561a8f 115 SMART SM00749 52 115 0.002 T 06-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria AM402_RS13905 627f5eaad5414716611b73df3f0d62bc 235 Pfam PF03374 Phage antirepressor protein KilAC domain 127 228 2.2E-27 T 06-07-2017 IPR005039 Antirepressor protein, C-terminal GO:0003677 AM402_RS13905 627f5eaad5414716611b73df3f0d62bc 235 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 20 99 2.1E-13 T 06-07-2017 IPR014054 Bacteriophage regulatory protein, Rha family AM402_RS04770 9fd54e3587c9a312fab5b823d7293f20 138 Pfam PF11990 Protein of unknown function (DUF3487) 2 123 8.9E-44 T 06-07-2017 IPR021877 Protein of unknown function DUF3487 AM402_RS04770 9fd54e3587c9a312fab5b823d7293f20 138 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 122 3.6E-43 T 06-07-2017 IPR021877 Protein of unknown function DUF3487 AM402_RS13125 5c93f630be3c87eb6731467bd2b53978 185 Pfam PF02613 Nitrate reductase delta subunit 35 147 7.1E-7 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone AM402_RS13125 5c93f630be3c87eb6731467bd2b53978 185 PIRSF PIRSF004690 1 185 1.5E-51 T 06-07-2017 IPR026269 Tat proofreading chaperone DmsD-type AM402_RS13125 5c93f630be3c87eb6731467bd2b53978 185 SUPERFAMILY SSF89155 2 179 5.06E-36 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone AM402_RS13125 5c93f630be3c87eb6731467bd2b53978 185 Gene3D G3DSA:1.10.3480.10 1 181 1.8E-37 T 06-07-2017 IPR020945 DMSO/Nitrate reductase chaperone AM402_RS21105 8115b825f35265510df96bb27800eff5 100 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 81 1.1E-22 T 06-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS21105 8115b825f35265510df96bb27800eff5 100 Gene3D G3DSA:3.40.120.10 3 81 1.1E-23 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS21105 8115b825f35265510df96bb27800eff5 100 SUPERFAMILY SSF53738 2 81 5.1E-22 T 06-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM402_RS14720 dece27a402f86c3307d4ae3f585a1b5c 465 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 319 452 2.4E-23 T 06-07-2017 IPR006517 Archaeophage PsiM2, terminase large subunit AM402_RS14720 dece27a402f86c3307d4ae3f585a1b5c 465 Pfam PF03237 Terminase-like family 61 449 5.7E-30 T 06-07-2017 IPR004921 Terminase, large subunit AM402_RS02610 2ac38dcb03265eb4d913d811e05963fe 106 SUPERFAMILY SSF47413 9 75 4.22E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS02610 2ac38dcb03265eb4d913d811e05963fe 106 SMART SM00530 13 68 2.7E-10 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS02610 2ac38dcb03265eb4d913d811e05963fe 106 Gene3D G3DSA:1.10.260.40 7 75 3.3E-14 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS02610 2ac38dcb03265eb4d913d811e05963fe 106 Pfam PF01381 Helix-turn-helix 14 56 1.9E-11 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS05325 e3ae0a2f64b84d51452fdbe6b175f4cd 211 Pfam PF14348 Domain of unknown function (DUF4400) 33 209 9.6E-25 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type AM402_RS07485 bce134add1f9142fcb751562b67daec3 175 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 3 171 4.0E-36 T 06-07-2017 IPR009502 Secretion monitor GO:0045182 AM402_RS07485 bce134add1f9142fcb751562b67daec3 175 Hamap MF_01332 Secretion monitor [secM]. 1 175 30.527 T 06-07-2017 IPR009502 Secretion monitor GO:0045182 AM402_RS07485 bce134add1f9142fcb751562b67daec3 175 Pfam PF06558 Secretion monitor precursor protein (SecM) 23 172 1.1E-51 T 06-07-2017 IPR009502 Secretion monitor GO:0045182 AM402_RS10845 a418b551fc3fa2f5c43d7004254f2afb 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.2E-15 T 06-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM402_RS10845 a418b551fc3fa2f5c43d7004254f2afb 287 SUPERFAMILY SSF46785 5 79 3.61E-14 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS10845 a418b551fc3fa2f5c43d7004254f2afb 287 Gene3D G3DSA:1.10.10.10 5 80 1.4E-18 T 06-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AM402_RS17235 d96426ddf3125630cd1187e8c1a4706a 198 PIRSF PIRSF006102 1 198 5.4E-66 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM402_RS17235 d96426ddf3125630cd1187e8c1a4706a 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.398 T 06-07-2017 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM402_RS17235 d96426ddf3125630cd1187e8c1a4706a 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 7.6E-104 T 06-07-2017 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM402_RS17235 d96426ddf3125630cd1187e8c1a4706a 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.6E-59 T 06-07-2017 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM402_RS09705 bf0c6d434b853a9e7ce075a3bd36e793 268 Pfam PF13861 FlgD Tudor-like domain 89 265 1.2E-11 T 06-07-2017 IPR025963 FlgD Tudor-like domain AM402_RS09705 bf0c6d434b853a9e7ce075a3bd36e793 268 Pfam PF03963 Flagellar hook capping protein - N-terminal region 21 80 3.0E-23 T 06-07-2017 IPR005648 Flagellar hook capping protein AM402_RS09705 bf0c6d434b853a9e7ce075a3bd36e793 268 Pfam PF13860 FlgD Ig-like domain 159 223 5.1E-14 T 06-07-2017 IPR025965 FlgD Ig-like domain AM402_RS11955 cbefe3955c6e00b1fd3c03b26b61e28e 594 Pfam PF00916 Sulfate permease family 27 391 3.5E-81 T 06-07-2017 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM402_RS11955 cbefe3955c6e00b1fd3c03b26b61e28e 594 Gene3D G3DSA:3.30.750.24 449 537 5.5E-6 T 06-07-2017 IPR002645 STAS domain AM402_RS11955 cbefe3955c6e00b1fd3c03b26b61e28e 594 SUPERFAMILY SSF52091 449 537 1.08E-5 T 06-07-2017 IPR002645 STAS domain AM402_RS11955 cbefe3955c6e00b1fd3c03b26b61e28e 594 Pfam PF01740 STAS domain 449 533 1.7E-8 T 06-07-2017 IPR002645 STAS domain AM402_RS02900 3431ca6dd9b883ecdf611492660cad85 259 Gene3D G3DSA:3.40.50.150 13 218 2.2E-39 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS02900 3431ca6dd9b883ecdf611492660cad85 259 SUPERFAMILY SSF53335 7 256 5.12E-44 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS02900 3431ca6dd9b883ecdf611492660cad85 259 Pfam PF08241 Methyltransferase domain 58 152 2.6E-24 T 06-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM402_RS14550 162ac75933f71ff7994c4c2e9bace74a 115 Pfam PF13989 YejG-like protein 4 108 1.1E-46 T 06-07-2017 IPR020489 Uncharacterised protein family YejG AM402_RS14550 162ac75933f71ff7994c4c2e9bace74a 115 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 2.0E-24 T 06-07-2017 IPR020489 Uncharacterised protein family YejG AM402_RS03755 05865e39cfb43582172bae14842fa67b 230 Pfam PF07356 Protein of unknown function (DUF1481) 40 226 3.8E-70 T 06-07-2017 IPR010858 Protein of unknown function DUF1481 AM402_RS21900 4d853062891fea46fa15511c244b0da1 70 Pfam PF11809 Domain of unknown function (DUF3330) 1 70 6.0E-34 T 06-07-2017 IPR021767 Protein of unknown function DUF3330 AM402_RS11105 c718a240163af28f6ace4f16a3b2c663 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 2.7E-33 T 06-07-2017 IPR024528 Threonine/Serine exporter, ThrE AM402_RS11105 c718a240163af28f6ace4f16a3b2c663 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 37.883 T 06-07-2017 IPR020914 Uncharacterised protein family UPF0442 AM402_RS12355 4e0651180b1b2bef82514bc199b61570 199 Pfam PF01810 LysE type translocator 16 197 3.3E-22 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS06835 6b2d7226c5e0930dd780c060a90935a1 813 Pfam PF02687 FtsX-like permease family 692 800 2.3E-11 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AM402_RS06835 6b2d7226c5e0930dd780c060a90935a1 813 Pfam PF02687 FtsX-like permease family 249 365 7.1E-10 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AM402_RS06835 6b2d7226c5e0930dd780c060a90935a1 813 Pfam PF12704 MacB-like periplasmic core domain 18 183 2.6E-6 T 06-07-2017 IPR025857 MacB-like periplasmic core domain AM402_RS07870 ab97d3777d185e2552e6a40a2a1e89ac 145 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 126 6.0E-40 T 06-07-2017 IPR009678 Bacteriophage tail completion protein R AM402_RS18610 d7970720e720547c880d131533d85430 321 Pfam PF01435 Peptidase family M48 100 317 1.4E-39 T 06-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM402_RS18610 d7970720e720547c880d131533d85430 321 Gene3D G3DSA:3.30.2010.10 96 181 3.0E-26 T 06-07-2017 AM402_RS07190 7023dcf74b94e992465e1962292d4ae3 162 Gene3D G3DSA:3.40.630.30 2 150 1.4E-14 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS07190 7023dcf74b94e992465e1962292d4ae3 162 SUPERFAMILY SSF55729 3 150 9.37E-15 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS02565 be790d0aabf700726b7684b7d6ea4da5 110 Pfam PF10625 Universal stress protein B (UspB) 1 107 1.2E-54 T 06-07-2017 IPR019598 Universal stress protein B AM402_RS15905 19b1fcf79658d6f7d64102d3f72c8b17 369 Pfam PF12698 ABC-2 family transporter protein 24 362 9.0E-51 T 06-07-2017 AM402_RS15905 19b1fcf79658d6f7d64102d3f72c8b17 369 Gene3D G3DSA:3.40.1710.10 47 148 6.7E-4 T 06-07-2017 AM402_RS15785 fbe245ad8e34217f98eab2bce75e1a80 389 Gene3D G3DSA:1.20.1250.20 18 193 1.0E-11 T 06-07-2017 AM402_RS15785 fbe245ad8e34217f98eab2bce75e1a80 389 SUPERFAMILY SSF103473 14 382 3.4E-26 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS15785 fbe245ad8e34217f98eab2bce75e1a80 389 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 24 381 4.3E-80 T 06-07-2017 IPR010645 Uncharacterised MFS-type transporter YbfB AM402_RS15785 fbe245ad8e34217f98eab2bce75e1a80 389 Gene3D G3DSA:1.20.1250.20 215 388 6.8E-5 T 06-07-2017 AM402_RS10915 79b4a82f987d53b8a949cc140d68c97a 346 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 346 2.6E-41 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10915 79b4a82f987d53b8a949cc140d68c97a 346 Gene3D G3DSA:1.10.3720.10 100 174 3.8E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10915 79b4a82f987d53b8a949cc140d68c97a 346 Gene3D G3DSA:1.10.3720.10 213 339 3.8E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10915 79b4a82f987d53b8a949cc140d68c97a 346 SUPERFAMILY SSF161098 103 171 1.57E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS10915 79b4a82f987d53b8a949cc140d68c97a 346 SUPERFAMILY SSF161098 210 330 1.57E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS18580 41443ff02a05dc00d5d243a3c011677e 422 Pfam PF04261 Dyp-type peroxidase family 63 410 1.8E-96 T 06-07-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM402_RS18580 41443ff02a05dc00d5d243a3c011677e 422 SUPERFAMILY SSF54909 57 415 8.76E-83 T 06-07-2017 IPR011008 Dimeric alpha-beta barrel AM402_RS18580 41443ff02a05dc00d5d243a3c011677e 422 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 17 421 9.5E-138 T 06-07-2017 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 AM402_RS18580 41443ff02a05dc00d5d243a3c011677e 422 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 63 409 6.4E-86 T 06-07-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM402_RS05690 4eaa37ee6a072bcd98916f48126bbb8e 314 SUPERFAMILY SSF111331 40 225 1.34E-16 T 06-07-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM402_RS05690 4eaa37ee6a072bcd98916f48126bbb8e 314 Gene3D G3DSA:2.60.200.30 164 246 3.1E-8 T 06-07-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AM402_RS05690 4eaa37ee6a072bcd98916f48126bbb8e 314 Gene3D G3DSA:3.40.50.10330 41 46 1.1E-5 T 06-07-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AM402_RS05690 4eaa37ee6a072bcd98916f48126bbb8e 314 Gene3D G3DSA:3.40.50.10330 79 163 1.1E-5 T 06-07-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AM402_RS11960 10f25916b799ea390c70cf376c59cb89 253 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 245 4.7E-29 T 06-07-2017 IPR009627 Uncharacterised protein family UPF0259 AM402_RS11255 0aa21482352090dd2bdfcea88c6d5b86 435 Pfam PF01458 Uncharacterized protein family (UPF0051) 183 407 1.7E-71 T 06-07-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AM402_RS11255 0aa21482352090dd2bdfcea88c6d5b86 435 SUPERFAMILY SSF101960 44 433 4.97E-105 T 06-07-2017 AM402_RS11255 0aa21482352090dd2bdfcea88c6d5b86 435 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 146 422 5.7E-85 T 06-07-2017 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AM402_RS14300 db97ff1b2c5c925d1b9f50322615c228 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 414 8.4E-149 T 06-07-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM402_RS14300 db97ff1b2c5c925d1b9f50322615c228 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 4.9E-191 T 06-07-2017 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 AM402_RS14300 db97ff1b2c5c925d1b9f50322615c228 415 Pfam PF12704 MacB-like periplasmic core domain 28 233 4.3E-15 T 06-07-2017 IPR025857 MacB-like periplasmic core domain AM402_RS14300 db97ff1b2c5c925d1b9f50322615c228 415 Pfam PF02687 FtsX-like permease family 275 408 2.3E-19 T 06-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AM402_RS09435 b0945b2e9a5fd4f1c784ba5bb8cb971b 192 Pfam PF03729 Short repeat of unknown function (DUF308) 86 154 2.0E-8 T 06-07-2017 IPR005325 Protein of unknown function DUF308, membrane AM402_RS09435 b0945b2e9a5fd4f1c784ba5bb8cb971b 192 Pfam PF03729 Short repeat of unknown function (DUF308) 27 98 1.9E-10 T 06-07-2017 IPR005325 Protein of unknown function DUF308, membrane AM402_RS13120 5a2da84b8622b35b2729bae8c45cc06e 184 Pfam PF07273 Protein of unknown function (DUF1439) 27 179 1.4E-47 T 06-07-2017 IPR010835 Protein of unknown function DUF1439 AM402_RS05050 438944335ecadaafccec7d50e16b400b 216 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 13 197 3.0E-66 T 06-07-2017 AM402_RS05050 438944335ecadaafccec7d50e16b400b 216 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 128 211 2.3E-9 T 06-07-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AM402_RS19790 a97f143dde210f7a8aaa8a7fcda8da6e 442 Pfam PF01523 Putative modulator of DNA gyrase 28 318 6.0E-54 T 06-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM402_RS19790 a97f143dde210f7a8aaa8a7fcda8da6e 442 SUPERFAMILY SSF111283 9 441 8.11E-128 T 06-07-2017 AM402_RS01685 1a2cefc8ae9882ce5b0e08ebaa6ad090 352 Pfam PF07751 Abi-like protein 40 182 2.4E-5 T 06-07-2017 IPR011664 Abortive infection system protein AbiD/AbiF-like AM402_RS13300 933316e8afa54f32f6c33d4084537fdf 400 Pfam PF01266 FAD dependent oxidoreductase 8 394 3.5E-58 T 06-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM402_RS13300 933316e8afa54f32f6c33d4084537fdf 400 SUPERFAMILY SSF51905 6 288 5.18E-46 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS13300 933316e8afa54f32f6c33d4084537fdf 400 Gene3D G3DSA:3.50.50.60 143 220 7.3E-29 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS13300 933316e8afa54f32f6c33d4084537fdf 400 Gene3D G3DSA:3.50.50.60 5 89 7.3E-29 T 06-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM402_RS13300 933316e8afa54f32f6c33d4084537fdf 400 Gene3D G3DSA:3.30.9.10 222 349 2.5E-5 T 06-07-2017 AM402_RS13300 933316e8afa54f32f6c33d4084537fdf 400 Gene3D G3DSA:3.30.9.10 91 142 2.5E-5 T 06-07-2017 AM402_RS10710 05df01155aedf567a81baf43513651ce 333 Pfam PF03824 High-affinity nickel-transport protein 65 321 1.5E-40 T 06-07-2017 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AM402_RS11370 a0baa71d2bd242e1a8a38450681c5903 81 SUPERFAMILY SSF46955 4 65 8.97E-12 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS11370 a0baa71d2bd242e1a8a38450681c5903 81 Pfam PF07825 Excisionase-like protein 3 50 1.9E-11 T 06-07-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM402_RS11370 a0baa71d2bd242e1a8a38450681c5903 81 Gene3D G3DSA:1.10.1660.20 2 73 1.9E-21 T 06-07-2017 IPR012884 Excisionase-like GO:0003677|GO:0006310 AM402_RS03205 b397b7be45fcb25f44a6f4fe40a0e968 116 Pfam PF16068 Domain of unknown function (DUF4810) 24 108 1.4E-32 T 06-07-2017 IPR014508 Uncharacterised conserved protein withTPR-like repeats AM402_RS03205 b397b7be45fcb25f44a6f4fe40a0e968 116 PIRSF PIRSF020555 1 116 5.7E-41 T 06-07-2017 IPR014508 Uncharacterised conserved protein withTPR-like repeats AM402_RS16315 e9e464af0e4a4438f555dc0d50904cf1 181 Pfam PF16970 Type-1 fimbrial protein, A 52 181 2.6E-36 T 06-07-2017 AM402_RS16315 e9e464af0e4a4438f555dc0d50904cf1 181 SUPERFAMILY SSF49401 27 181 8.95E-29 T 06-07-2017 IPR008966 Adhesion domain AM402_RS16315 e9e464af0e4a4438f555dc0d50904cf1 181 Gene3D G3DSA:2.60.40.1090 26 181 9.5E-30 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04635 7ce7b208696addee27b9f8936230104c 354 Pfam PF02371 Transposase IS116/IS110/IS902 family 230 313 1.9E-19 T 06-07-2017 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AM402_RS04635 7ce7b208696addee27b9f8936230104c 354 Pfam PF01548 Transposase 13 159 9.7E-20 T 06-07-2017 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AM402_RS03480 6224ab28e6c9efbcbbccd269a926b3c5 132 Pfam PF03083 Sugar efflux transporter for intercellular exchange 56 128 2.1E-7 T 06-07-2017 IPR004316 SWEET sugar transporter GO:0016021 AM402_RS20910 2c2a02d56286f8f5a9d8db532431e244 192 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 33 163 9.8E-17 T 06-07-2017 IPR014118 Type IV conjugative transfer system protein TraV AM402_RS20910 2c2a02d56286f8f5a9d8db532431e244 192 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 49 163 5.3E-26 T 06-07-2017 IPR014118 Type IV conjugative transfer system protein TraV AM402_RS01415 e564f3d90bdf804fc4a9ef66fd10ecdf 211 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 5 70 1.1E-12 T 06-07-2017 IPR006522 Phage virion morphogensis protein AM402_RS01415 e564f3d90bdf804fc4a9ef66fd10ecdf 211 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 129 206 2.1E-11 T 06-07-2017 IPR006522 Phage virion morphogensis protein AM402_RS01415 e564f3d90bdf804fc4a9ef66fd10ecdf 211 Pfam PF05069 Phage virion morphogenesis family 126 209 4.2E-15 T 06-07-2017 IPR006522 Phage virion morphogensis protein AM402_RS01415 e564f3d90bdf804fc4a9ef66fd10ecdf 211 Pfam PF05069 Phage virion morphogenesis family 5 63 1.3E-11 T 06-07-2017 IPR006522 Phage virion morphogensis protein AM402_RS21620 6eae8a0c0ba621f40d365bde67ff3515 286 Pfam PF13462 Thioredoxin 101 251 4.4E-22 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS21620 6eae8a0c0ba621f40d365bde67ff3515 286 Gene3D G3DSA:3.40.30.10 99 274 4.3E-36 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS21620 6eae8a0c0ba621f40d365bde67ff3515 286 SUPERFAMILY SSF52833 100 272 8.57E-31 T 06-07-2017 IPR012336 Thioredoxin-like fold AM402_RS17325 7d7745a99cf41dea8447f63b28b9069b 139 SUPERFAMILY SSF53098 5 137 1.97E-42 T 06-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AM402_RS17325 7d7745a99cf41dea8447f63b28b9069b 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 25.868 T 06-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM402_RS17325 7d7745a99cf41dea8447f63b28b9069b 139 Gene3D G3DSA:3.30.420.140 4 138 1.0E-46 T 06-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 AM402_RS17325 7d7745a99cf41dea8447f63b28b9069b 139 Pfam PF03652 Holliday junction resolvase 5 136 1.8E-42 T 06-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM402_RS17325 7d7745a99cf41dea8447f63b28b9069b 139 SMART SM00732 4 104 3.0E-40 T 06-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 AM402_RS17325 7d7745a99cf41dea8447f63b28b9069b 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 136 1.1E-55 T 06-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM402_RS20190 9e9b0ade1c5fa5ec5c7ebdcc665fe642 146 Pfam PF05232 Chlorhexidine efflux transporter 3 65 3.0E-16 T 06-07-2017 IPR007896 Chlorhexidine efflux transporter AM402_RS20190 9e9b0ade1c5fa5ec5c7ebdcc665fe642 146 Pfam PF05232 Chlorhexidine efflux transporter 71 133 3.4E-24 T 06-07-2017 IPR007896 Chlorhexidine efflux transporter AM402_RS00755 c02c1a96c6e3d470a7538fc348ea7599 59 Pfam PF08046 IlvGEDA operon leader peptide 27 58 1.2E-21 T 06-07-2017 IPR012567 IlvGEDA operon leader peptide GO:0009082 AM402_RS00565 ead8062e29bbd22159f3b5bc07d3b0fc 61 Pfam PF13627 Prokaryotic lipoprotein-attachment site 15 35 3.4E-9 T 06-07-2017 IPR032831 Prokaryotic lipoprotein-attachment site AM402_RS20405 bc2c30e29994e1660574ad585f46e6bb 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 14 77 5.0E-15 T 06-07-2017 AM402_RS20405 bc2c30e29994e1660574ad585f46e6bb 94 SUPERFAMILY SSF55021 9 79 6.11E-14 T 06-07-2017 AM402_RS20405 bc2c30e29994e1660574ad585f46e6bb 94 Gene3D G3DSA:3.30.70.260 10 78 5.5E-19 T 06-07-2017 AM402_RS20405 bc2c30e29994e1660574ad585f46e6bb 94 Pfam PF13710 ACT domain 17 77 4.9E-8 T 06-07-2017 AM402_RS03055 e4d2479d7d3a7865d5cd0b3a2cfca689 491 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 66 214 3.8E-14 T 06-07-2017 AM402_RS14855 1d8a92c4b543cb78635944f3c5c0b435 166 Pfam PF05565 Siphovirus Gp157 9 166 1.7E-46 T 06-07-2017 IPR008840 Siphovirus Gp157 AM402_RS16115 47c6100802aa487990e609542a620202 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 207 9.0E-42 T 06-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM402_RS16115 47c6100802aa487990e609542a620202 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 5.1E-94 T 06-07-2017 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AM402_RS17940 054e53590582cbca022ccd291d0300a7 760 SUPERFAMILY SSF51120 495 647 2.83E-8 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS17940 054e53590582cbca022ccd291d0300a7 760 Gene3D G3DSA:2.150.10.10 497 706 5.6E-5 T 06-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AM402_RS17870 b214b82d52076f766ec710756404557c 181 Pfam PF11072 Protein of unknown function (DUF2859) 36 179 4.1E-45 T 06-07-2017 IPR021300 Integrating conjugative element protein, PFL4695 AM402_RS17870 b214b82d52076f766ec710756404557c 181 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 78 181 2.1E-36 T 06-07-2017 IPR021300 Integrating conjugative element protein, PFL4695 AM402_RS04965 acaf54f32235321d2622e5391ee70eba 114 Pfam PF13698 Domain of unknown function (DUF4156) 23 113 6.2E-31 T 06-07-2017 IPR025294 Protein of unknown function DUF4156 AM402_RS20500 e05f78c67e0becf827bd8c9d2b1598d8 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 356 3.5E-131 T 06-07-2017 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AM402_RS20500 e05f78c67e0becf827bd8c9d2b1598d8 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 356 1.3E-70 T 06-07-2017 IPR005495 Permease LptG/LptF-related GO:0016021 AM402_RS01425 4540793738c2e4d418bb9ca4fd958c66 167 Pfam PF03245 Bacteriophage Rz lysis protein 41 149 1.7E-22 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 AM402_RS04710 a824b5ec3b3c86a29be7fff53dde7619 220 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 58 161 9.4E-39 T 06-07-2017 IPR022260 Integrating conjugative element protein PilL, PFGI-1 AM402_RS03140 7d63aa01e4790937724d7903984fd952 249 SUPERFAMILY SSF161098 21 214 6.54E-41 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03140 7d63aa01e4790937724d7903984fd952 249 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 114 1.8E-15 T 06-07-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM402_RS03140 7d63aa01e4790937724d7903984fd952 249 Gene3D G3DSA:1.10.3720.10 23 221 4.9E-44 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS03140 7d63aa01e4790937724d7903984fd952 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 2.8E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS21345 9588994170727a31e6a7a71dadac2c57 399 Pfam PF04986 Putative transposase 144 322 9.2E-50 T 06-07-2017 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 AM402_RS21345 9588994170727a31e6a7a71dadac2c57 399 Pfam PF14319 Transposase zinc-binding domain 19 120 4.9E-27 T 06-07-2017 IPR026889 Transposase zinc-binding domain AM402_RS07985 bb6d10f0c7f0d47adf2798def599aaa8 248 SUPERFAMILY SSF46894 10 96 1.39E-6 T 06-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM402_RS20765 eac28e6da373348f8d85f417d3816a3e 74 SUPERFAMILY SSF54292 9 74 6.95E-17 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS20765 eac28e6da373348f8d85f417d3816a3e 74 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 66 2.4E-9 T 06-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM402_RS20765 eac28e6da373348f8d85f417d3816a3e 74 Gene3D G3DSA:3.10.20.30 8 73 1.6E-16 T 06-07-2017 IPR012675 Beta-grasp domain AM402_RS20765 eac28e6da373348f8d85f417d3816a3e 74 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 27 35 - T 06-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM402_RS11445 ab99265433a95d9e9f10d04f998938b5 121 Gene3D G3DSA:1.20.120.330 14 120 9.0E-10 T 06-07-2017 AM402_RS16585 ab99265433a95d9e9f10d04f998938b5 121 Gene3D G3DSA:1.20.120.330 14 120 9.0E-10 T 06-07-2017 AM402_RS16550 df917021dcc06d59a8e3004cd0177c8c 111 SUPERFAMILY SSF101386 1 98 5.23E-12 T 06-07-2017 AM402_RS16550 df917021dcc06d59a8e3004cd0177c8c 111 Gene3D G3DSA:1.10.287.1080 1 90 1.4E-10 T 06-07-2017 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 Pfam PF02119 Flagellar P-ring protein 24 367 1.1E-133 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 Hamap MF_00416 Flagellar P-ring protein [flgI]. 4 368 37.98 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 39 54 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 107 124 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 85 104 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 190 208 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 59 74 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 24 39 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 164 182 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 124 142 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS09730 4875172add9e899ea2587dc3646767d5 368 PRINTS PR01010 Flagellar P-ring protein signature 254 266 4.3E-91 T 06-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM402_RS21720 7675433343cd9157bb4df3b399880e85 177 Pfam PF01464 Transglycosylase SLT domain 29 153 2.2E-8 T 06-07-2017 IPR008258 Transglycosylase SLT domain 1 AM402_RS21720 7675433343cd9157bb4df3b399880e85 177 SUPERFAMILY SSF53955 98 175 6.26E-18 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS21720 7675433343cd9157bb4df3b399880e85 177 SUPERFAMILY SSF53955 26 68 6.26E-18 T 06-07-2017 IPR023346 Lysozyme-like domain AM402_RS21720 7675433343cd9157bb4df3b399880e85 177 Gene3D G3DSA:1.10.530.10 28 62 3.7E-24 T 06-07-2017 AM402_RS21720 7675433343cd9157bb4df3b399880e85 177 Gene3D G3DSA:1.10.530.10 98 176 3.7E-24 T 06-07-2017 AM402_RS18345 936c0c239f5812811689ee29b0dcf787 173 Pfam PF04449 CS1 type fimbrial major subunit 31 161 1.4E-9 T 06-07-2017 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 AM402_RS02010 ac7be55a4506efef1b757a798ee6f61b 218 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 8 205 5.4E-64 T 06-07-2017 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AM402_RS02010 ac7be55a4506efef1b757a798ee6f61b 218 Gene3D G3DSA:1.20.950.20 4 215 1.2E-68 T 06-07-2017 AM402_RS02010 ac7be55a4506efef1b757a798ee6f61b 218 SUPERFAMILY SSF81342 5 212 7.61E-51 T 06-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM402_RS02010 ac7be55a4506efef1b757a798ee6f61b 218 Pfam PF01292 Prokaryotic cytochrome b561 11 186 1.3E-20 T 06-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM402_RS08400 2f585ad57ae820a4909ec0f9a6a1b8a9 154 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 7.0E-33 T 06-07-2017 IPR007359 Positive regulator of sigma(E), RseC/MucC AM402_RS08400 2f585ad57ae820a4909ec0f9a6a1b8a9 154 PIRSF PIRSF004923 1 151 2.6E-38 T 06-07-2017 IPR026268 Protein RseC AM402_RS09930 b767dd9f0f52c3affb07b7e95fff5f72 147 Gene3D G3DSA:3.40.50.620 3 147 5.1E-22 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS09930 b767dd9f0f52c3affb07b7e95fff5f72 147 PRINTS PR01438 Universal stress protein signature 108 120 7.5E-9 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS09930 b767dd9f0f52c3affb07b7e95fff5f72 147 PRINTS PR01438 Universal stress protein signature 125 147 7.5E-9 T 06-07-2017 IPR006015 Universal stress protein A AM402_RS09930 b767dd9f0f52c3affb07b7e95fff5f72 147 SUPERFAMILY SSF52402 1 147 1.09E-19 T 06-07-2017 AM402_RS09930 b767dd9f0f52c3affb07b7e95fff5f72 147 Pfam PF00582 Universal stress protein family 1 147 4.6E-17 T 06-07-2017 IPR006016 UspA GO:0006950 AM402_RS07600 ac2d22f3fa6cbb7f31a5f9d079ffb7e5 207 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.666 T 06-07-2017 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 AM402_RS07600 ac2d22f3fa6cbb7f31a5f9d079ffb7e5 207 Pfam PF01810 LysE type translocator 14 201 1.4E-44 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS18290 a4eb54cd9e0211f2d4c62f897f2bcc01 403 Pfam PF07690 Major Facilitator Superfamily 14 359 3.6E-33 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS18290 a4eb54cd9e0211f2d4c62f897f2bcc01 403 SUPERFAMILY SSF103473 11 398 2.22E-43 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS18290 a4eb54cd9e0211f2d4c62f897f2bcc01 403 Gene3D G3DSA:1.20.1250.20 13 194 1.1E-24 T 06-07-2017 AM402_RS18290 a4eb54cd9e0211f2d4c62f897f2bcc01 403 Gene3D G3DSA:1.20.1250.20 218 399 2.1E-12 T 06-07-2017 AM402_RS10215 d6ea92ea4a027de90cb611ec6ee9b83b 65 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 7.6E-34 T 06-07-2017 IPR020910 Uncharacterised protein family UPF0370 AM402_RS14080 7581e2c0f3442139c3b43b866c7348b8 577 Pfam PF03354 Phage Terminase 112 554 2.9E-87 T 06-07-2017 IPR005021 Phage terminase AM402_RS00425 a924cd339ea37f90557c8270b4b88342 89 Gene3D G3DSA:3.40.1620.10 7 54 4.2E-7 T 06-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM402_RS00425 a924cd339ea37f90557c8270b4b88342 89 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 9 60 1.2E-8 T 06-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM402_RS00425 a924cd339ea37f90557c8270b4b88342 89 SUPERFAMILY SSF143120 6 78 9.94E-17 T 06-07-2017 AM402_RS00425 a924cd339ea37f90557c8270b4b88342 89 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 73 2.9E-16 T 06-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM402_RS00105 7d53828d27eb38ecd853ef4012bfb226 295 Pfam PF13432 Tetratricopeptide repeat 104 165 0.0011 T 06-07-2017 AM402_RS00105 7d53828d27eb38ecd853ef4012bfb226 295 SMART SM00028 63 96 0.062 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS00105 7d53828d27eb38ecd853ef4012bfb226 295 SMART SM00028 236 269 28.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS00105 7d53828d27eb38ecd853ef4012bfb226 295 SMART SM00028 97 130 0.024 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS00105 7d53828d27eb38ecd853ef4012bfb226 295 SMART SM00028 131 164 42.0 T 06-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AM402_RS00105 7d53828d27eb38ecd853ef4012bfb226 295 PIRSF PIRSF004654 3 294 2.2E-105 T 06-07-2017 IPR023605 Lipoprotein NlpI AM402_RS00105 7d53828d27eb38ecd853ef4012bfb226 295 Gene3D G3DSA:1.25.40.10 48 270 3.6E-27 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS00105 7d53828d27eb38ecd853ef4012bfb226 295 SUPERFAMILY SSF48452 28 285 6.64E-67 T 06-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM402_RS21210 9316fb4723fa58d29ed3669b23d2a6a4 304 Pfam PF03524 Conjugal transfer protein 85 303 8.7E-53 T 06-07-2017 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AM402_RS21210 9316fb4723fa58d29ed3669b23d2a6a4 304 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 86 289 8.5E-59 T 06-07-2017 IPR014142 P-type conjugative transfer protein TrbG AM402_RS03345 fb3cb0ee3f9334a6f788a90970d16e30 193 Pfam PF03352 Methyladenine glycosylase 8 183 1.8E-80 T 06-07-2017 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AM402_RS03345 fb3cb0ee3f9334a6f788a90970d16e30 193 SUPERFAMILY SSF48150 4 185 2.43E-81 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM402_RS03345 fb3cb0ee3f9334a6f788a90970d16e30 193 Gene3D G3DSA:1.10.340.30 4 185 5.4E-87 T 06-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM402_RS03345 fb3cb0ee3f9334a6f788a90970d16e30 193 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 183 2.9E-78 T 06-07-2017 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AM402_RS08215 4066d760412049e9b0e0abfa16420dcf 228 Pfam PF06551 Protein of unknown function (DUF1120) 27 101 1.0E-6 T 06-07-2017 IPR010546 Protein of unknown function DUF1120 AM402_RS08215 4066d760412049e9b0e0abfa16420dcf 228 Gene3D G3DSA:2.60.40.1090 26 105 4.3E-5 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS08215 4066d760412049e9b0e0abfa16420dcf 228 SUPERFAMILY SSF49401 26 113 8.95E-8 T 06-07-2017 IPR008966 Adhesion domain AM402_RS07905 7428a38f49aa6eea2c54e411349f8a0a 479 Pfam PF12571 Phage tail-collar fibre protein 1 149 1.5E-60 T 06-07-2017 IPR022225 Phage tail fibre protein AM402_RS19925 5e1835ca40e34ea2d5da363e7b15451f 434 Gene3D G3DSA:3.40.190.10 158 343 6.7E-41 T 06-07-2017 AM402_RS19925 5e1835ca40e34ea2d5da363e7b15451f 434 SUPERFAMILY SSF53850 24 423 6.14E-70 T 06-07-2017 AM402_RS19925 5e1835ca40e34ea2d5da363e7b15451f 434 Pfam PF13416 Bacterial extracellular solute-binding protein 42 367 6.9E-39 T 06-07-2017 AM402_RS19925 5e1835ca40e34ea2d5da363e7b15451f 434 Gene3D G3DSA:3.40.190.10 43 157 6.4E-10 T 06-07-2017 AM402_RS12835 f2852153adc3ccf35daedad42a7868b3 155 SUPERFAMILY SSF52218 18 147 3.96E-24 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS12835 f2852153adc3ccf35daedad42a7868b3 155 Gene3D G3DSA:3.40.50.360 44 149 4.7E-29 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS12835 f2852153adc3ccf35daedad42a7868b3 155 Pfam PF02525 Flavodoxin-like fold 44 144 3.2E-17 T 06-07-2017 IPR003680 Flavodoxin-like fold AM402_RS21445 871a4c970f9838d2d7cca80cd28eaaaf 312 SUPERFAMILY SSF110849 58 118 8.63E-5 T 06-07-2017 IPR003115 ParB/Sulfiredoxin AM402_RS21445 871a4c970f9838d2d7cca80cd28eaaaf 312 SUPERFAMILY SSF109709 132 220 2.75E-14 T 06-07-2017 AM402_RS09575 01508007c8e99bc9b9e8b148f0a01746 168 Pfam PF10777 Inner membrane protein YlaC 1 152 1.8E-69 T 06-07-2017 IPR019713 Inner membrane protein YlaC AM402_RS14105 512ff83ac269b91d286db89037f4b622 153 Pfam PF03245 Bacteriophage Rz lysis protein 31 151 5.6E-21 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 AM402_RS01555 ae09ce457b13bdde081529fa8c4986d7 188 Pfam PF07813 LTXXQ motif family protein 72 168 1.1E-18 T 06-07-2017 IPR012899 LTXXQ motif family protein GO:0042597 AM402_RS01555 ae09ce457b13bdde081529fa8c4986d7 188 PIRSF PIRSF034445 1 179 9.6E-35 T 06-07-2017 IPR012899 LTXXQ motif family protein GO:0042597 AM402_RS17365 e79f992dfd0b35821ba4bcccdfb01ba2 245 Pfam PF11101 Protein of unknown function (DUF2884) 25 242 4.7E-33 T 06-07-2017 IPR021307 Protein of unknown function DUF2884 AM402_RS05270 b76365c524e84c38aef128645a311c9e 266 Pfam PF08849 Putative inner membrane protein (DUF1819) 45 192 2.3E-13 T 06-07-2017 IPR014948 Protein of unknown function DUF1819, putative inner membrane AM402_RS05270 b76365c524e84c38aef128645a311c9e 266 Gene3D G3DSA:1.10.3540.10 43 182 3.9E-10 T 06-07-2017 IPR023137 DUF1819 domain AM402_RS20035 5354a6d7b12f1f2b3511eb61a2667855 84 Pfam PF01206 Sulfurtransferase TusA 10 79 6.2E-26 T 06-07-2017 IPR001455 TusA-like domain AM402_RS20035 5354a6d7b12f1f2b3511eb61a2667855 84 Gene3D G3DSA:3.30.110.40 6 80 1.2E-30 T 06-07-2017 IPR001455 TusA-like domain AM402_RS20035 5354a6d7b12f1f2b3511eb61a2667855 84 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.509 T 06-07-2017 IPR022931 Sulphurtransferase TusA GO:0016783 AM402_RS20035 5354a6d7b12f1f2b3511eb61a2667855 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 06-07-2017 IPR001455 TusA-like domain AM402_RS20035 5354a6d7b12f1f2b3511eb61a2667855 84 SUPERFAMILY SSF64307 5 79 1.05E-26 T 06-07-2017 IPR001455 TusA-like domain AM402_RS05305 3f4702ab22548f26b1ccfe7e62e901b0 271 Pfam PF14355 Abortive infection C-terminus 177 257 1.0E-20 T 06-07-2017 IPR026001 Abortive infection protein-like, C-terminal domain AM402_RS13550 6c65a889bf772846506f5bddaf3f51de 131 Pfam PF10947 Protein of unknown function (DUF2628) 8 118 2.6E-25 T 06-07-2017 IPR024399 Protein of unknown function DUF2628 AM402_RS13550 6c65a889bf772846506f5bddaf3f51de 131 ProDom PD031864 YIGF SIMILAR ESCHERICHIA COLI MEMBRANE XCC4223 XAC4357 XAC2195 7 125 3.0E-19 T 06-07-2017 AM402_RS08190 63181fa5034358ee6151c4038d97e7ad 192 SUPERFAMILY SSF52218 1 191 7.33E-40 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS08190 63181fa5034358ee6151c4038d97e7ad 192 Gene3D G3DSA:3.40.50.360 1 191 2.4E-42 T 06-07-2017 IPR029039 Flavoprotein-like domain AM402_RS08190 63181fa5034358ee6151c4038d97e7ad 192 Pfam PF02525 Flavodoxin-like fold 1 186 6.2E-34 T 06-07-2017 IPR003680 Flavodoxin-like fold AM402_RS10570 a6e85f95e760ac68771ecbe7f887858c 102 Pfam PF03091 CutA1 divalent ion tolerance protein 3 99 2.6E-34 T 06-07-2017 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AM402_RS10570 a6e85f95e760ac68771ecbe7f887858c 102 SUPERFAMILY SSF54913 2 101 1.45E-35 T 06-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM402_RS10570 a6e85f95e760ac68771ecbe7f887858c 102 Gene3D G3DSA:3.30.70.830 1 101 2.2E-39 T 06-07-2017 AM402_RS11100 c7f637b1b17d88ea8b46fec85aa8445d 267 Pfam PF06738 Putative threonine/serine exporter 23 261 2.0E-67 T 06-07-2017 IPR010619 Putative threonine/serine exporter AM402_RS13290 3880f5ac5fbe7971b00db4f7897aa685 655 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 129 564 8.9E-96 T 06-07-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM402_RS13290 3880f5ac5fbe7971b00db4f7897aa685 655 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 643 2.4E-200 T 06-07-2017 IPR011853 TRAP transporter, 4TM/12TM fusion protein AM402_RS04835 f16be1d844d1c41bc9231187922800d3 135 Pfam PF12553 Protein of unknown function (DUF3742) 1 133 1.7E-7 T 06-07-2017 IPR022213 Protein of unknown function DUF3742 AM402_RS19125 d848e55ea23c7007c00cda47aba9c9cd 97 Gene3D G3DSA:1.10.260.40 12 73 7.2E-8 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS19125 d848e55ea23c7007c00cda47aba9c9cd 97 Pfam PF13560 Helix-turn-helix domain 14 49 2.6E-6 T 06-07-2017 AM402_RS19125 d848e55ea23c7007c00cda47aba9c9cd 97 SUPERFAMILY SSF47413 13 66 2.22E-6 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS21580 aeacafcedfea84b8a40297f878c9ddcd 326 Pfam PF01609 Transposase DDE domain 138 312 5.9E-32 T 06-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM402_RS21580 aeacafcedfea84b8a40297f878c9ddcd 326 Pfam PF05598 Transposase domain (DUF772) 51 124 1.7E-21 T 06-07-2017 IPR008490 Transposase InsH, N-terminal AM402_RS05170 9a07be1389c4fd24466271000a4ffa68 180 Gene3D G3DSA:3.40.630.30 2 179 5.6E-20 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS05170 9a07be1389c4fd24466271000a4ffa68 180 Pfam PF13673 Acetyltransferase (GNAT) domain 65 159 1.5E-11 T 06-07-2017 IPR000182 GNAT domain GO:0008080 AM402_RS05170 9a07be1389c4fd24466271000a4ffa68 180 SUPERFAMILY SSF55729 2 166 2.19E-20 T 06-07-2017 IPR016181 Acyl-CoA N-acyltransferase AM402_RS08300 f239d6821d4da785675fa25b9e21a4b5 213 TIGRFAM TIGR02646 TIGR02646: TIGR02646 family protein 23 164 3.0E-29 T 06-07-2017 IPR013467 Conserved hypothetical protein CHP02646 AM402_RS15380 5a14fc633eecdfbf82b77fe11cca911f 276 Pfam PF02698 DUF218 domain 86 247 6.5E-24 T 06-07-2017 IPR003848 Domain of unknown function DUF218 AM402_RS15380 5a14fc633eecdfbf82b77fe11cca911f 276 Gene3D G3DSA:3.40.50.620 78 213 3.4E-14 T 06-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM402_RS18145 c71173771462f3f5901e46a7dfcacbd6 181 SUPERFAMILY SSF49401 57 181 1.14E-23 T 06-07-2017 IPR008966 Adhesion domain AM402_RS18145 c71173771462f3f5901e46a7dfcacbd6 181 Gene3D G3DSA:2.60.40.1090 48 181 1.1E-9 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS18145 c71173771462f3f5901e46a7dfcacbd6 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 53 76 8.8E-5 T 06-07-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 AM402_RS18145 c71173771462f3f5901e46a7dfcacbd6 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 114 135 8.8E-5 T 06-07-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 AM402_RS18145 c71173771462f3f5901e46a7dfcacbd6 181 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 98 112 8.8E-5 T 06-07-2017 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 AM402_RS18145 c71173771462f3f5901e46a7dfcacbd6 181 Pfam PF00419 Fimbrial protein 48 181 1.1E-19 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS15260 91b5d07386b9b321ef524e8cbe993a28 143 Gene3D G3DSA:3.10.450.40 28 136 1.8E-10 T 06-07-2017 AM402_RS15260 91b5d07386b9b321ef524e8cbe993a28 143 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 142 1.4E-33 T 06-07-2017 IPR017737 Type VI secretion system, lysozyme-related protein AM402_RS15260 91b5d07386b9b321ef524e8cbe993a28 143 SUPERFAMILY SSF160719 33 137 4.05E-17 T 06-07-2017 AM402_RS15260 91b5d07386b9b321ef524e8cbe993a28 143 Pfam PF04965 Gene 25-like lysozyme 35 123 3.7E-14 T 06-07-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD AM402_RS10475 007bf19521f747784be7321994952adb 251 Pfam PF10543 ORF6N domain 18 108 8.0E-15 T 06-07-2017 IPR018873 KilA-N, DNA-binding domain AM402_RS14160 2719417d70382d77f5f9732e03a368a8 267 SMART SM01252 8 107 2.3E-31 T 06-07-2017 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding AM402_RS14160 2719417d70382d77f5f9732e03a368a8 267 Pfam PF04383 KilA-N domain 10 106 7.1E-19 T 06-07-2017 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding AM402_RS01500 1ce0adacddd2a10d49a33359bf541f83 792 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 137 518 1.0E-114 T 06-07-2017 IPR008766 Replication gene A protein GO:0006260 AM402_RS01280 ba174c56d7c9f46061ccbaccf5ebf1fc 394 Gene3D G3DSA:1.20.1250.20 9 191 2.1E-25 T 06-07-2017 AM402_RS01280 ba174c56d7c9f46061ccbaccf5ebf1fc 394 Pfam PF07690 Major Facilitator Superfamily 17 350 1.3E-30 T 06-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM402_RS01280 ba174c56d7c9f46061ccbaccf5ebf1fc 394 SUPERFAMILY SSF103473 8 386 3.92E-52 T 06-07-2017 IPR020846 Major facilitator superfamily domain AM402_RS20645 81657486203f2f22d174b63d9de6e990 133 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 43 122 8.4E-8 T 06-07-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM402_RS20645 81657486203f2f22d174b63d9de6e990 133 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 45 125 1.0E-4 T 06-07-2017 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AM402_RS18900 f8c69aa6a2064b9c94032c3d8f9e18b4 253 SUPERFAMILY SSF111364 24 253 2.62E-32 T 06-07-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM402_RS18900 f8c69aa6a2064b9c94032c3d8f9e18b4 253 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 253 1.2E-44 T 06-07-2017 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM402_RS20915 3446925a2f3604fc63bc83a283af148d 438 Pfam PF03743 Bacterial conjugation TrbI-like protein 225 427 3.4E-38 T 06-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM402_RS07480 1c8d3bea18c586c81542ffe11980275b 172 Pfam PF05258 Protein of unknown function (DUF721) 20 98 3.8E-13 T 06-07-2017 IPR007922 Protein of unknown function DUF721/UPF0232 AM402_RS06700 122f6cff5fdb6bd81309f0a3b23a272f 222 Pfam PF01066 CDP-alcohol phosphatidyltransferase 32 106 1.5E-7 T 06-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM402_RS15255 3c71477ebbf8b7b2344cb618f6f77d9d 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 66 490 8.1E-176 T 06-07-2017 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM402_RS15255 3c71477ebbf8b7b2344cb618f6f77d9d 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 1.5E-209 T 06-07-2017 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM402_RS15015 2a19fd018ae530f34def30a1bc396f56 724 Pfam PF13515 Fusaric acid resistance protein-like 409 528 4.6E-24 T 06-07-2017 AM402_RS15015 2a19fd018ae530f34def30a1bc396f56 724 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 11 704 8.8E-288 T 06-07-2017 IPR010019 Integral membrane protein, YccS AM402_RS15015 2a19fd018ae530f34def30a1bc396f56 724 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 11 703 9.7E-260 T 06-07-2017 IPR010020 Integral membrane protein, YccS/YhfK AM402_RS15015 2a19fd018ae530f34def30a1bc396f56 724 Pfam PF12805 FUSC-like inner membrane protein yccS 69 348 1.1E-106 T 06-07-2017 IPR032692 Integral membrane protein YccS, N-terminal AM402_RS07935 7408fd1bc6d2041840351825040a614a 154 PIRSF PIRSF029208 1 146 4.0E-56 T 06-07-2017 IPR016912 Bacteriophage P2, GpU AM402_RS07935 7408fd1bc6d2041840351825040a614a 154 Pfam PF06995 Phage P2 GpU 6 125 2.5E-43 T 06-07-2017 IPR009734 Myoviridae, GpU AM402_RS07830 c1bc42fce366e5b0cfa6e9feb93764f7 269 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 269 1.2E-107 T 06-07-2017 IPR009228 Capsid scaffolding protein GpO GO:0019069 AM402_RS02720 fda419952a3cc5bba4f270f0f638c6db 160 SUPERFAMILY SSF50249 3 64 5.88E-10 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS02720 fda419952a3cc5bba4f270f0f638c6db 160 Pfam PF00313 'Cold-shock' DNA-binding domain 4 64 3.9E-8 T 06-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM402_RS02720 fda419952a3cc5bba4f270f0f638c6db 160 Gene3D G3DSA:2.40.50.140 2 70 2.2E-19 T 06-07-2017 IPR012340 Nucleic acid-binding, OB-fold AM402_RS19205 8a3afb4d99a98e9a48a8e0e797bd4aa9 408 Pfam PF04143 Sulphur transport 4 160 1.6E-24 T 06-07-2017 IPR007272 Sulphur transport domain AM402_RS19205 8a3afb4d99a98e9a48a8e0e797bd4aa9 408 Pfam PF04143 Sulphur transport 237 398 9.2E-25 T 06-07-2017 IPR007272 Sulphur transport domain AM402_RS03540 eeb65a5cc1d5143b39a67e5b274791dc 201 Pfam PF01810 LysE type translocator 15 190 1.4E-15 T 06-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AM402_RS07605 b40f33c570115f74b7fa3ee9d051ed05 244 Pfam PF04402 Protein of unknown function (DUF541) 31 238 6.7E-46 T 06-07-2017 IPR007497 Protein of unknown function DUF541 AM402_RS05315 c942a07d44ae4c72736db32ff704941b 606 Pfam PF12696 TraM recognition site of TraD and TraG 451 576 2.3E-12 T 06-07-2017 IPR032689 TraD/TraG, TraM recognition site AM402_RS05315 c942a07d44ae4c72736db32ff704941b 606 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 153 287 6.3E-10 T 06-07-2017 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AM402_RS05315 c942a07d44ae4c72736db32ff704941b 606 Gene3D G3DSA:3.40.50.300 114 227 1.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05315 c942a07d44ae4c72736db32ff704941b 606 Gene3D G3DSA:3.40.50.300 399 600 1.4E-51 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05315 c942a07d44ae4c72736db32ff704941b 606 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 599 1.4E-226 T 06-07-2017 IPR022458 Conjugative coupling factor TraG/TraD AM402_RS05315 c942a07d44ae4c72736db32ff704941b 606 SUPERFAMILY SSF52540 353 593 2.91E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS05315 c942a07d44ae4c72736db32ff704941b 606 SUPERFAMILY SSF52540 129 291 2.91E-57 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21085 ea8beace73e2509580fdf2223f9cda9b 261 SUPERFAMILY SSF52540 1 260 3.12E-41 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS21085 ea8beace73e2509580fdf2223f9cda9b 261 Pfam PF13614 AAA domain 3 186 2.3E-33 T 06-07-2017 IPR025669 AAA domain AM402_RS21085 ea8beace73e2509580fdf2223f9cda9b 261 Gene3D G3DSA:3.40.50.300 1 260 1.7E-45 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS11495 e3a082bf3a18e73f5710917500b90524 60 Pfam PF14354 Restriction alleviation protein Lar 7 56 7.6E-9 T 06-07-2017 AM402_RS10170 0c858098193c82314c16f01fc26f794b 362 Pfam PF01594 Domain of unknown function DUF20 20 345 1.0E-75 T 06-07-2017 IPR002549 Transmembrane protein TqsA-like AM402_RS21040 959eb46ffb0c6b691b743a88779b88b3 168 Gene3D G3DSA:2.10.230.10 4 35 3.6E-4 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM402_RS21040 959eb46ffb0c6b691b743a88779b88b3 168 SUPERFAMILY SSF57938 4 37 2.88E-5 T 06-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM402_RS02760 4bbd124c12d79a261a40462b43741a2f 496 Pfam PF00474 Sodium:solute symporter family 38 442 3.5E-43 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS02760 4bbd124c12d79a261a40462b43741a2f 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 443 1.8E-68 T 06-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS08845 324ea6610214c92a2c3d252096af5399 267 Pfam PF01925 Sulfite exporter TauE/SafE 6 265 9.7E-40 T 06-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 AM402_RS15775 cac654b6f450df4d1cc56621a6d9d556 383 Pfam PF04235 Protein of unknown function (DUF418) 221 374 1.7E-31 T 06-07-2017 IPR007349 Domain of unknown function DUF418 AM402_RS12200 a03e27aba68e8c1312b341f7812ba511 328 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 320 5.0E-104 T 06-07-2017 IPR016833 Putative sodium bile acid cotransporter AM402_RS12200 a03e27aba68e8c1312b341f7812ba511 328 PIRSF PIRSF026166 1 328 6.2E-131 T 06-07-2017 IPR016833 Putative sodium bile acid cotransporter AM402_RS16000 128f91725108922360a129e1b29e4d6f 47 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 18.141 T 06-07-2017 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM402_RS16000 128f91725108922360a129e1b29e4d6f 47 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 45 2.9E-23 T 06-07-2017 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 AM402_RS18560 b797bf4d452d22dfb41bfc7ed1d7b7d5 185 PIRSF PIRSF017018 1 185 6.5E-71 T 06-07-2017 IPR018470 Periplasmic metal-binding protein Tp34-type AM402_RS18560 b797bf4d452d22dfb41bfc7ed1d7b7d5 185 Pfam PF10634 Fe2+ transport protein 21 178 1.3E-64 T 06-07-2017 IPR018470 Periplasmic metal-binding protein Tp34-type AM402_RS19115 340489e22c8cba037d8049c900e8c4aa 283 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 4 278 3.7E-103 T 06-07-2017 IPR017483 Conserved hypothetical protein CHP03034 AM402_RS19115 340489e22c8cba037d8049c900e8c4aa 283 Pfam PF11692 Protein of unknown function (DUF3289) 6 278 3.4E-104 T 06-07-2017 IPR017483 Conserved hypothetical protein CHP03034 AM402_RS16070 cd704b528bed06c59fc2ec83ac56ed7f 242 Pfam PF04973 Nicotinamide mononucleotide transporter 26 230 1.7E-51 T 06-07-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM402_RS16070 cd704b528bed06c59fc2ec83ac56ed7f 242 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 233 3.7E-58 T 06-07-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM402_RS12395 3c75b68f35e38fe52802e0bea4f31ccc 93 Pfam PF17090 Uncharacterised protein family 28 91 2.0E-7 T 06-07-2017 IPR031381 Uncharacterised protein YtcA AM402_RS11840 cc2685c2f67d91dd762f5964bde59305 76 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 2 75 7.3E-29 T 06-07-2017 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM402_RS11840 cc2685c2f67d91dd762f5964bde59305 76 Pfam PF06667 Phage shock protein B 4 75 5.8E-32 T 06-07-2017 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AM402_RS06785 8541db4c83a574667e2f2d9c3f279f74 269 Pfam PF01963 TraB family 31 266 1.0E-35 T 06-07-2017 IPR002816 Pheromone shutdown, TraB AM402_RS12780 9a593ae7bf5214cca08b2c5ea8e62c50 188 Gene3D G3DSA:2.60.40.1090 38 187 8.4E-23 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS12780 9a593ae7bf5214cca08b2c5ea8e62c50 188 Pfam PF00419 Fimbrial protein 38 187 1.5E-15 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS12780 9a593ae7bf5214cca08b2c5ea8e62c50 188 SUPERFAMILY SSF49401 38 187 3.52E-21 T 06-07-2017 IPR008966 Adhesion domain AM402_RS07885 f84629fbf6879fa36a0fb3946f6da0c3 210 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 9 208 1.3E-58 T 06-07-2017 IPR013046 Phage baseplate assembly protein V/Gp45 AM402_RS07885 f84629fbf6879fa36a0fb3946f6da0c3 210 Pfam PF04717 Type VI secretion system, phage-baseplate injector 6 116 1.6E-45 T 06-07-2017 IPR006531 Gp5 N-terminal AM402_RS08160 1612609425e2149dd3ba269081fab7f7 137 Pfam PF07007 Protein of unknown function (DUF1311) 41 132 2.7E-13 T 06-07-2017 IPR009739 Protein of unknown function DUF1311 AM402_RS08975 2ff2452c4d5e199503b8879466e98eda 233 Pfam PF09335 SNARE associated Golgi protein 56 183 2.1E-26 T 06-07-2017 IPR032816 SNARE associated Golgi protein AM402_RS20105 8ef08ad6c780c29df93eb9acd365a4da 104 SUPERFAMILY SSF103481 5 103 8.89E-20 T 06-07-2017 AM402_RS20105 8ef08ad6c780c29df93eb9acd365a4da 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 7.0E-33 T 06-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 AM402_RS17695 0d203657a495a60f46d45479a5b6b008 421 Pfam PF13730 Helix-turn-helix domain 55 115 2.4E-11 T 06-07-2017 AM402_RS01400 bddab5c1d11c2ba83efd16396cb502fc 302 Pfam PF04865 Baseplate J-like protein 119 261 7.7E-25 T 06-07-2017 IPR006949 Baseplate protein J-like AM402_RS01400 bddab5c1d11c2ba83efd16396cb502fc 302 PIRSF PIRSF020481 1 302 1.2E-125 T 06-07-2017 IPR014507 Baseplate assembly protein J, predicted AM402_RS13525 89b05686234dd53db7ccf18e6f7b96c5 113 Pfam PF10709 Protein of unknown function (DUF2511) 24 110 1.2E-33 T 06-07-2017 IPR019648 Protein of unknown function DUF2511 AM402_RS08925 14a6baf67ab56ac64a0c2917839d8ac6 90 Pfam PF08891 YfcL protein 4 86 6.3E-35 T 06-07-2017 IPR014987 Uncharacterised protein family YfcL AM402_RS10760 93a84ba0ff823e59a768cc952a911784 322 Pfam PF13988 Protein of unknown function (DUF4225) 91 287 4.7E-11 T 06-07-2017 IPR025320 Protein of unknown function DUF4225 AM402_RS08735 07ea804f3fb6d8be858ef9149362a367 256 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 10 250 27.761 T 06-07-2017 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AM402_RS08735 07ea804f3fb6d8be858ef9149362a367 256 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 16 232 6.5E-40 T 06-07-2017 AM402_RS01935 6640f77e1adfaa573d1968df1d46a396 154 Pfam PF06496 Protein of unknown function (DUF1097) 8 142 2.9E-36 T 06-07-2017 IPR009476 Protein of unknown function DUF1097 AM402_RS18485 53010c1acca618803f6579e341d1f417 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 8 139 9.1E-44 T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS18485 53010c1acca618803f6579e341d1f417 165 Gene3D G3DSA:3.30.70.560 7 161 2.0E-55 T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS18485 53010c1acca618803f6579e341d1f417 165 SUPERFAMILY SSF55083 7 163 3.14E-52 T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS18485 53010c1acca618803f6579e341d1f417 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 9 139 3.2E-35 T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS18485 53010c1acca618803f6579e341d1f417 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 94 105 - T 06-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM402_RS21410 9639ae61befeef88d0c9d717327f42c5 112 Pfam PF13356 Domain of unknown function (DUF4102) 2 83 3.5E-16 T 06-07-2017 IPR025166 Domain of unknown function DUF4102 AM402_RS07780 62f1b02ad4ddaa815499aac955445b17 131 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 33 129 0.005 T 06-07-2017 AM402_RS06985 feb725302fc41f077b4a1dcf84c49e6b 1076 Pfam PF06120 Tail length tape measure protein 314 449 2.9E-7 T 06-07-2017 IPR009302 Tail length tape measure AM402_RS04900 b9b14d3feda4e5078f36c3b64d9ec682 99 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 9 84 6.8E-13 T 06-07-2017 IPR009610 CbtA toxin of type IV toxin-antitoxin system AM402_RS00045 f04445d01018c663583407a7bf40ce14 381 Pfam PF12698 ABC-2 family transporter protein 31 365 9.7E-22 T 06-07-2017 AM402_RS06830 31c9552474049c88c11df50de35032d3 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 06-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM402_RS06830 31c9552474049c88c11df50de35032d3 228 SUPERFAMILY SSF52540 6 226 1.52E-63 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06830 31c9552474049c88c11df50de35032d3 228 Gene3D G3DSA:3.40.50.300 5 227 3.6E-64 T 06-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM402_RS06830 31c9552474049c88c11df50de35032d3 228 SMART SM00382 35 221 1.6E-9 T 06-07-2017 IPR003593 AAA+ ATPase domain AM402_RS06830 31c9552474049c88c11df50de35032d3 228 Pfam PF00005 ABC transporter 26 174 8.8E-31 T 06-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM402_RS13140 5c2d24eab655b45ae9ced74bfec6abaf 313 SUPERFAMILY SSF51735 99 279 1.68E-44 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS13140 5c2d24eab655b45ae9ced74bfec6abaf 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 2.5E-43 T 06-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM402_RS13140 5c2d24eab655b45ae9ced74bfec6abaf 313 Gene3D G3DSA:3.40.50.720 99 279 1.3E-47 T 06-07-2017 IPR016040 NAD(P)-binding domain AM402_RS13140 5c2d24eab655b45ae9ced74bfec6abaf 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 06-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM402_RS01720 2d97a77aa6b680200558270229606256 320 Gene3D G3DSA:3.20.20.370 30 262 5.6E-9 T 06-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM402_RS01720 2d97a77aa6b680200558270229606256 320 SUPERFAMILY SSF88713 30 165 4.73E-9 T 06-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM402_RS14760 bac9618b06443da18ebec6e86b712d02 177 Pfam PF06530 Phage antitermination protein Q 21 106 1.2E-5 T 06-07-2017 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 AM402_RS12495 9e693f3385274ea7d517ecdf61293fa9 129 Pfam PF07007 Protein of unknown function (DUF1311) 32 122 4.1E-19 T 06-07-2017 IPR009739 Protein of unknown function DUF1311 AM402_RS08605 e7faa4224f31d75d98eb429892106f5e 141 Pfam PF14581 SseB protein C-terminal domain 16 124 8.5E-27 T 06-07-2017 IPR027945 SseB protein, C-terminal AM402_RS14345 816ea02e4386a51947ab4ace1ff31065 193 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 193 33.426 T 06-07-2017 IPR014094 Penicillin-binding protein activator LpoB AM402_RS14345 816ea02e4386a51947ab4ace1ff31065 193 Pfam PF13036 Peptidoglycan-synthase activator LpoB 7 192 2.2E-37 T 06-07-2017 IPR014094 Penicillin-binding protein activator LpoB AM402_RS04240 1b0a895b27a550f2ca80ef67606dd80a 274 Gene3D G3DSA:3.40.50.150 18 123 3.9E-20 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS04240 1b0a895b27a550f2ca80ef67606dd80a 274 Pfam PF13649 Methyltransferase domain 65 137 5.5E-12 T 06-07-2017 AM402_RS04240 1b0a895b27a550f2ca80ef67606dd80a 274 SUPERFAMILY SSF53335 17 164 7.25E-23 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS02110 8509e8b580b76441a2a0492c352b7ee1 104 SUPERFAMILY SSF141729 33 102 1.22E-8 T 06-07-2017 AM402_RS02125 561e8715b7ccc7df0f38045e9080b560 149 Pfam PF04214 Protein of unknown function, DUF 54 122 1.2E-17 T 06-07-2017 IPR007332 Protein of unknown function DUF411 AM402_RS08260 ef59d49d478f4308ab28ebad99c56627 256 Pfam PF14281 PD-(D/E)XK nuclease superfamily 66 224 1.4E-39 T 06-07-2017 IPR029470 PD-(D/E)XK nuclease superfamily 4 AM402_RS09855 94de525ca72a3063d32127ce37cf2598 472 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 226 461 6.7E-62 T 06-07-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 AM402_RS09855 94de525ca72a3063d32127ce37cf2598 472 Pfam PF07196 Flagellin hook IN motif 131 187 9.6E-11 T 06-07-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AM402_RS09855 94de525ca72a3063d32127ce37cf2598 472 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 12 106 5.1E-16 T 06-07-2017 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AM402_RS20930 e66e8c55ad064e33f61130b625ffdf54 93 Pfam PF07178 TraL protein 5 91 2.0E-23 T 06-07-2017 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM402_RS20930 e66e8c55ad064e33f61130b625ffdf54 93 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 80 6.0E-14 T 06-07-2017 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AM402_RS07175 3c2ef29e758cd76dfff14990640496dd 721 SMART SM00869 441 711 5.3E-25 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS07175 3c2ef29e758cd76dfff14990640496dd 721 Gene3D G3DSA:2.40.128.130 418 721 1.9E-36 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS07175 3c2ef29e758cd76dfff14990640496dd 721 SUPERFAMILY SSF103515 409 721 7.59E-33 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS07175 3c2ef29e758cd76dfff14990640496dd 721 Pfam PF03797 Autotransporter beta-domain 442 703 6.2E-30 T 06-07-2017 IPR005546 Autotransporter beta-domain AM402_RS21810 eed7f14dd87f25831317bf570a8e3f9c 116 Pfam PF02411 MerT mercuric transport protein 1 116 1.8E-64 T 06-07-2017 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 AM402_RS21710 02c0f776f64b2ea7ceb2701152bf8c6e 183 Pfam PF05280 Flagellar transcriptional activator (FlhC) 15 178 1.8E-9 T 06-07-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 AM402_RS21710 02c0f776f64b2ea7ceb2701152bf8c6e 183 SUPERFAMILY SSF160930 7 169 1.24E-32 T 06-07-2017 AM402_RS12055 8ae2ce36b237e4fd2f97638b77ebcb0e 90 Pfam PF05488 PAAR motif 14 82 1.3E-14 T 06-07-2017 IPR008727 PAAR motif AM402_RS01165 3d21a90085862ad1c018c276c95b5d48 273 Pfam PF11299 Protein of unknown function (DUF3100) 27 266 2.4E-74 T 06-07-2017 IPR021450 Protein of unknown function DUF3100 AM402_RS12560 b4d6e50a6dd2fa3c8b6b0af54af34109 203 Pfam PF02734 DAK2 domain 35 203 3.9E-27 T 06-07-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM402_RS12560 b4d6e50a6dd2fa3c8b6b0af54af34109 203 SMART SM01120 34 203 1.5E-9 T 06-07-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM402_RS12560 b4d6e50a6dd2fa3c8b6b0af54af34109 203 SUPERFAMILY SSF101473 7 202 1.44E-30 T 06-07-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 AM402_RS06170 277b27c31f081ee955afa75f779213ff 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.3E-23 T 06-07-2017 IPR006696 Protein of unknown function DUF423 AM402_RS01545 c07b17de9c82b1b8a961c3d19b4b8e91 97 SUPERFAMILY SSF47413 1 53 4.5E-12 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS01545 c07b17de9c82b1b8a961c3d19b4b8e91 97 Pfam PF01381 Helix-turn-helix 7 52 1.9E-12 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS01545 c07b17de9c82b1b8a961c3d19b4b8e91 97 Gene3D G3DSA:1.10.260.40 1 51 1.2E-13 T 06-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM402_RS01545 c07b17de9c82b1b8a961c3d19b4b8e91 97 SMART SM00530 6 63 9.9E-9 T 06-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM402_RS04810 0b205802e6e6d22740a12dcd506f6576 146 Pfam PF07511 Protein of unknown function (DUF1525) 26 139 2.6E-26 T 06-07-2017 IPR011090 Integrating conjugative element protein, PFL4709 AM402_RS04810 0b205802e6e6d22740a12dcd506f6576 146 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 26 137 2.2E-27 T 06-07-2017 IPR011090 Integrating conjugative element protein, PFL4709 AM402_RS13810 9d108550fee249bf10863dd4906d0dbe 157 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 12 120 7.3E-9 T 06-07-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component AM402_RS13810 9d108550fee249bf10863dd4906d0dbe 157 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 152 2.7E-21 T 06-07-2017 IPR010064 Bacteriophage HK97-gp10, putative tail-component AM402_RS13785 f9210da195aafd66662e3bef399abba3 63 Pfam PF01679 Proteolipid membrane potential modulator 1 47 8.4E-7 T 06-07-2017 IPR000612 Proteolipid membrane potential modulator GO:0016021 AM402_RS07850 c086a94301739db485e13a3b1872e998 68 Pfam PF05489 Phage Tail Protein X 1 58 7.0E-27 T 06-07-2017 IPR008861 Phage Tail Protein X-like AM402_RS01440 c086a94301739db485e13a3b1872e998 68 Pfam PF05489 Phage Tail Protein X 1 58 7.0E-27 T 06-07-2017 IPR008861 Phage Tail Protein X-like AM402_RS01625 44ba61c413027a64beda4baade4562ae 263 Pfam PF00535 Glycosyl transferase family 2 11 135 1.1E-35 T 06-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM402_RS01625 44ba61c413027a64beda4baade4562ae 263 SUPERFAMILY SSF53448 9 225 3.75E-60 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS01625 44ba61c413027a64beda4baade4562ae 263 Gene3D G3DSA:3.90.550.10 9 230 2.1E-56 T 06-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AM402_RS04985 9af44dde2de3245b467577a2f77315d2 191 Gene3D G3DSA:2.60.40.1090 28 187 3.9E-5 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS04985 9af44dde2de3245b467577a2f77315d2 191 SUPERFAMILY SSF49401 29 187 3.33E-6 T 06-07-2017 IPR008966 Adhesion domain AM402_RS17690 81269159f77e2734ed05c2b6d13e3596 237 Pfam PF08900 Domain of unknown function (DUF1845) 18 235 4.1E-64 T 06-07-2017 IPR014996 Integrating conjugative element protein, PFL4669 AM402_RS17690 81269159f77e2734ed05c2b6d13e3596 237 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 19 235 1.3E-55 T 06-07-2017 IPR014996 Integrating conjugative element protein, PFL4669 AM402_RS05205 da8f2f7cbbedff2b9b1b5c51ba8f1b92 306 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 37 268 2.2E-32 T 06-07-2017 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AM402_RS18760 0ba94e613c1d692d39dc202a4656ebb2 51 Pfam PF10689 Protein of unknown function (DUF2496) 3 44 2.8E-23 T 06-07-2017 IPR019630 Protein of unknown function DUF2496, YbaM-related AM402_RS15610 1ccd98ada9d9609bc53be4a3de67af83 100 Pfam PF07214 Protein of unknown function (DUF1418) 9 98 4.9E-28 T 06-07-2017 IPR010815 Protein of unknown function DUF1418 AM402_RS01395 fb079f8b5aa5dd481c43667197a71b0d 203 Pfam PF09684 Phage tail protein (Tail_P2_I) 5 140 1.8E-51 T 06-07-2017 IPR006521 Tail protein I AM402_RS01395 fb079f8b5aa5dd481c43667197a71b0d 203 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 5 141 3.3E-59 T 06-07-2017 IPR006521 Tail protein I AM402_RS02525 aac0354374d1c62fb516726c49cc4e44 702 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 1 697 0.0 T 06-07-2017 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AM402_RS02525 aac0354374d1c62fb516726c49cc4e44 702 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 698 0.0 T 06-07-2017 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 AM402_RS05130 0ffb160743bb0e8f3bd82bdebde59362 230 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 8.5E-65 T 06-07-2017 IPR019305 Uncharacterised protein family Smp AM402_RS02790 57f37e8c39bc556445cc037c8871a582 237 Pfam PF02308 MgtC family 22 150 1.0E-36 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS02790 57f37e8c39bc556445cc037c8871a582 237 PRINTS PR01837 MgtC/SapB protein signature 25 44 1.0E-43 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS02790 57f37e8c39bc556445cc037c8871a582 237 PRINTS PR01837 MgtC/SapB protein signature 79 101 1.0E-43 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS02790 57f37e8c39bc556445cc037c8871a582 237 PRINTS PR01837 MgtC/SapB protein signature 107 131 1.0E-43 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS02790 57f37e8c39bc556445cc037c8871a582 237 PRINTS PR01837 MgtC/SapB protein signature 44 62 1.0E-43 T 06-07-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM402_RS01350 5c73fabc86d27bcbff9cd75f65ffa2b3 72 Pfam PF04606 Ogr/Delta-like zinc finger 4 49 1.4E-21 T 06-07-2017 IPR007684 Zinc finger, Ogr/Delta-type AM402_RS13855 0f2f31b41634371a8d6959e34e9b1d18 153 Pfam PF03245 Bacteriophage Rz lysis protein 37 151 2.5E-21 T 06-07-2017 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 AM402_RS07410 e9ae377b9083adac87430d11eeba71a4 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 102 5.1E-25 T 06-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM402_RS07410 e9ae377b9083adac87430d11eeba71a4 105 Pfam PF04999 Cell division protein FtsL 9 103 1.8E-33 T 06-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM402_RS07410 e9ae377b9083adac87430d11eeba71a4 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.133 T 06-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM402_RS19945 defc0574773d6f531e8a488a62444a7e 250 Gene3D G3DSA:3.30.2010.10 64 145 4.3E-22 T 06-07-2017 AM402_RS19945 defc0574773d6f531e8a488a62444a7e 250 Pfam PF01435 Peptidase family M48 71 244 1.1E-26 T 06-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM402_RS18615 49d8de2435db5da070d8d6815c8ed4ae 60 Pfam PF10735 Protein of unknown function (DUF2526) 1 60 2.4E-20 T 06-07-2017 IPR019671 Protein of unknown function DUF2526 AM402_RS06370 4c4d0cbab1261aeb4cdb7b3c7513b9d4 217 Gene3D G3DSA:1.10.3720.10 9 212 1.0E-43 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS06370 4c4d0cbab1261aeb4cdb7b3c7513b9d4 217 SUPERFAMILY SSF161098 9 204 1.57E-47 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS06370 4c4d0cbab1261aeb4cdb7b3c7513b9d4 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 213 1.3E-19 T 06-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM402_RS13240 8697ee352642c2fcfe1d7b6989b2080d 177 Gene3D G3DSA:2.60.40.1090 44 177 2.0E-6 T 06-07-2017 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM402_RS13240 8697ee352642c2fcfe1d7b6989b2080d 177 SUPERFAMILY SSF49401 43 176 6.96E-10 T 06-07-2017 IPR008966 Adhesion domain AM402_RS09470 44c1fb52f441a2399a77d4f972d1eda1 88 Pfam PF11391 Protein of unknown function (DUF2798) 26 82 9.0E-17 T 06-07-2017 IPR021529 Protein of unknown function DUF2798 AM402_RS13080 2d8a0bc790950736ac01dc1597020672 529 Pfam PF09992 Phosphodiester glycosidase 415 519 1.0E-6 T 06-07-2017 IPR018711 Phosphodiester glycosidase AM402_RS19065 c82236ccffe0b064ab1b3c618eefb1a3 195 Pfam PF04336 Protein of unknown function, DUF479 81 185 1.3E-28 T 06-07-2017 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM402_RS19065 c82236ccffe0b064ab1b3c618eefb1a3 195 PIRSF PIRSF011489 1 195 2.7E-76 T 06-07-2017 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM402_RS08915 6955af61b129144d157347b4fe2e3c88 266 Pfam PF01925 Sulfite exporter TauE/SafE 13 248 4.3E-42 T 06-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 AM402_RS01985 332bbd8897e041a4aae44839858413a6 291 Pfam PF14305 TupA-like ATPgrasp 44 286 1.8E-52 T 06-07-2017 IPR029465 TupA-like ATPgrasp protein AM402_RS14685 e8894f9a503ababee63416989724a4ef 143 Pfam PF13262 Protein of unknown function (DUF4054) 11 112 1.3E-20 T 06-07-2017 IPR025127 Protein of unknown function DUF4054 AM402_RS08760 3c1a668d1f7c01fc8443c666eca2a754 73 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 73 7.0E-21 T 06-07-2017 IPR024530 Putative quorum-sensing-regulated virulence factor AM402_RS08760 3c1a668d1f7c01fc8443c666eca2a754 73 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 69 6.3E-32 T 06-07-2017 IPR024530 Putative quorum-sensing-regulated virulence factor AM402_RS09765 5ac3a938005b24e7ec02b487550dd3da 148 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 44 114 5.5E-23 T 06-07-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AM402_RS09765 5ac3a938005b24e7ec02b487550dd3da 148 Pfam PF04347 Flagellar biosynthesis protein, FliO 56 142 5.9E-22 T 06-07-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AM402_RS01420 5d32907bb77bd8cbe38fc8e2bb38b261 144 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 125 7.5E-40 T 06-07-2017 IPR009678 Bacteriophage tail completion protein R AM402_RS14940 86d7b182caf68e65a5ade8b801468694 498 Pfam PF03577 Peptidase family C69 23 421 1.2E-119 T 06-07-2017 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 AM402_RS05175 4b81bc94ce610418ca9c17167ff43ea8 87 Pfam PF07256 Protein of unknown function (DUF1435) 18 83 1.2E-8 T 06-07-2017 IPR009885 Protein of unknown function DUF1435 AM402_RS20220 efd5eecfd89601d0b606461c3400a9e0 416 Pfam PF01566 Natural resistance-associated macrophage protein 48 381 2.1E-18 T 06-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM402_RS20570 41179b92a45b8c2e74cd149d1e9dcaa7 128 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.9E-45 T 06-07-2017 IPR006175 YjgF/YER057c/UK114 family AM402_RS20570 41179b92a45b8c2e74cd149d1e9dcaa7 128 SUPERFAMILY SSF55298 3 128 6.6E-43 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS20570 41179b92a45b8c2e74cd149d1e9dcaa7 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 06-07-2017 IPR019897 RidA, conserved site AM402_RS20570 41179b92a45b8c2e74cd149d1e9dcaa7 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 127 2.5E-51 T 06-07-2017 IPR006056 RidA family AM402_RS20570 41179b92a45b8c2e74cd149d1e9dcaa7 128 Gene3D G3DSA:3.30.1330.40 4 127 3.6E-46 T 06-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM402_RS04795 ee63a0cd398e8b71dc368c4917dbca8f 145 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 15 141 2.5E-47 T 06-07-2017 IPR022262 Lipoprotein, putative AM402_RS15100 d824fc4ffddd48c7c336e107940918e0 343 Pfam PF06250 Protein of unknown function (DUF1016) 15 334 3.7E-120 T 06-07-2017 IPR009362 Protein of unknown function DUF1016 AM402_RS10395 4ffd0452657ac6ad209c8c5530909bd5 187 Pfam PF03592 Terminase small subunit 18 165 4.5E-30 T 06-07-2017 IPR005335 Terminase small subunit GO:0006323 AM402_RS20805 8facb736f4267157fd48f6b3a782d945 425 Pfam PF11348 Protein of unknown function (DUF3150) 7 266 7.7E-88 T 06-07-2017 IPR021496 Protein of unknown function DUF3150 AM402_RS14770 c6a94b443ca1940d333b17c88a219483 197 Pfam PF07105 Protein of unknown function (DUF1367) 1 196 4.6E-89 T 06-07-2017 IPR009797 Protein of unknown function DUF1367 AM402_RS04550 ccb6ea397d50ccc3ea2e6b21ca36c5c2 155 Pfam PF12101 Protein of unknown function (DUF3577) 8 137 2.9E-55 T 06-07-2017 IPR021960 Protein of unknown function DUF3577 AM402_RS05375 791aa8963befcda8893370451509ff4f 312 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 14 278 1.2E-35 T 06-07-2017 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AM402_RS05470 06b2476bab023154693f00593637aaeb 317 Pfam PF11348 Protein of unknown function (DUF3150) 6 259 2.6E-100 T 06-07-2017 IPR021496 Protein of unknown function DUF3150 AM402_RS05805 f77f925661a042ca91f138f84d959aad 305 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 283 2.9E-58 T 06-07-2017 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 AM402_RS02810 f874ca3d4765046639ac25555f87726e 299 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 169 4.0E-20 T 06-07-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM402_RS19515 e11388b642d4712b5cfa11b6959172f9 136 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 17 127 7.3E-18 T 06-07-2017 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AM402_RS06090 327288a2e79bf027b0f9758876ebf0e0 152 Pfam PF10713 Protein of unknown function (DUF2509) 24 149 7.3E-32 T 06-07-2017 IPR019652 Protein of unknown function DUF2509 AM402_RS17555 0fe110d9cd1a205c91f0955e70c0005c 324 Pfam PF06834 TraU protein 35 313 1.8E-69 T 06-07-2017 IPR009649 TraU AM402_RS17555 0fe110d9cd1a205c91f0955e70c0005c 324 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 28 322 1.3E-126 T 06-07-2017 IPR026331 Integrating conjugative element protein PFL_4710 AM402_RS09155 1be964dd34f43cb694489d85239c890a 177 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 158 2.0E-32 T 06-07-2017 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS02475 bb816c62bf3e37f850b95b63ad9ed313 314 Pfam PF05036 Sporulation related domain 230 303 5.6E-9 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS02475 bb816c62bf3e37f850b95b63ad9ed313 314 SUPERFAMILY SSF110997 231 301 7.72E-5 T 06-07-2017 IPR007730 Sporulation-related domain GO:0042834 AM402_RS03315 c918b2021eb3fbf801dd0d5f5dc84fc6 294 Gene3D G3DSA:3.60.10.10 3 245 7.6E-8 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS03315 c918b2021eb3fbf801dd0d5f5dc84fc6 294 SUPERFAMILY SSF56219 2 289 1.09E-14 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS03315 c918b2021eb3fbf801dd0d5f5dc84fc6 294 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 250 5.9E-7 T 06-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AM402_RS11220 dd738f637e10d69db079eab21d950d1e 370 Pfam PF01594 Domain of unknown function DUF20 15 344 8.6E-48 T 06-07-2017 IPR002549 Transmembrane protein TqsA-like AM402_RS17090 18198fdbf7f1fcd143d31de87b1954a4 266 Pfam PF01578 Cytochrome C assembly protein 39 264 7.4E-43 T 06-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM402_RS15870 adf5a3d10652aa72c120bfd7cc5505f3 82 Pfam PF04226 Transglycosylase associated protein 34 80 3.6E-12 T 06-07-2017 IPR007341 Transglycosylase-associated protein GO:0016021 AM402_RS03430 6d1e3d2c9d21f5092d90406f3df8401f 130 Pfam PF06476 Protein of unknown function (DUF1090) 11 118 9.9E-35 T 06-07-2017 IPR009468 Protein of unknown function DUF1090 AM402_RS04305 a31b88663800a10673b812d465fe6dc8 380 Pfam PF01103 Surface antigen 97 380 9.1E-11 T 06-07-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 AM402_RS14065 a259a73f519f7cd7f493a49dde11897e 404 SUPERFAMILY SSF56563 122 398 2.88E-70 T 06-07-2017 AM402_RS14065 a259a73f519f7cd7f493a49dde11897e 404 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 396 4.7E-51 T 06-07-2017 IPR006444 Phage major capsid protein, HK97 AM402_RS14065 a259a73f519f7cd7f493a49dde11897e 404 Pfam PF05065 Phage capsid family 130 397 8.8E-50 T 06-07-2017 IPR024455 Phage capsid AM402_RS04215 aec22863cbd313279e5b9b389ff37816 719 Pfam PF04888 Secretion system effector C (SseC) like family 367 711 1.5E-78 T 06-07-2017 IPR006972 Secretion system effector C, SseC-like GO:0009405 AM402_RS05615 2400c2243b36211942d4388f5d474923 437 TIGRFAM TIGR00784 citMHS: citrate transporter 2 424 5.2E-85 T 06-07-2017 IPR014738 Citrate transporter GO:0015137|GO:0015746 AM402_RS05615 2400c2243b36211942d4388f5d474923 437 Pfam PF03600 Citrate transporter 16 384 5.6E-43 T 06-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AM402_RS21625 f0d6fbf1f19203bea3ac1a5542ebf369 325 Gene3D G3DSA:3.90.226.10 218 301 4.2E-43 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS21625 f0d6fbf1f19203bea3ac1a5542ebf369 325 Gene3D G3DSA:3.90.226.10 49 180 4.2E-43 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS21625 f0d6fbf1f19203bea3ac1a5542ebf369 325 SUPERFAMILY SSF52096 217 277 1.04E-40 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS21625 f0d6fbf1f19203bea3ac1a5542ebf369 325 SUPERFAMILY SSF52096 61 188 1.04E-40 T 06-07-2017 IPR029045 ClpP/crotonase-like domain AM402_RS21625 f0d6fbf1f19203bea3ac1a5542ebf369 325 Pfam PF01343 Peptidase family S49 142 285 4.9E-35 T 06-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM402_RS05405 f79b4b2ac67526faacf3c55cd5417328 374 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 74 165 5.3E-22 T 06-07-2017 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AM402_RS18330 c3ec20b0d5aeb5a8b70e8e89180d4868 360 Pfam PF01032 FecCD transport family 42 354 4.4E-88 T 06-07-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM402_RS18330 c3ec20b0d5aeb5a8b70e8e89180d4868 360 Gene3D G3DSA:1.10.3470.10 23 357 4.8E-100 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS18330 c3ec20b0d5aeb5a8b70e8e89180d4868 360 SUPERFAMILY SSF81345 24 353 4.71E-81 T 06-07-2017 IPR029022 ABC transporter, BtuC-like AM402_RS21480 cf3a695f39d8964e278ea92cd301fbc1 64 Pfam PF11211 Protein of unknown function (DUF2997) 10 49 1.5E-4 T 06-07-2017 IPR021375 Protein of unknown function DUF2997 AM402_RS05410 f2b6bf331bbb76c9c73dd81d911566e1 342 Pfam PF06834 TraU protein 43 339 5.1E-102 T 06-07-2017 IPR009649 TraU AM402_RS02670 495f3bb5e13efe168b55f743c6dc290a 89 Pfam PF05488 PAAR motif 14 79 1.1E-16 T 06-07-2017 IPR008727 PAAR motif AM402_RS19575 fbac25dd0cb497dd7bd0ce4499111021 222 Pfam PF01730 UreF 36 180 4.6E-38 T 06-07-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM402_RS19575 fbac25dd0cb497dd7bd0ce4499111021 222 Hamap MF_01385 Urease accessory protein UreF [ureF]. 4 222 32.076 T 06-07-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM402_RS19575 fbac25dd0cb497dd7bd0ce4499111021 222 PIRSF PIRSF009467 1 222 1.1E-69 T 06-07-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM402_RS17745 63e0a753f9ce049442b525c09f80c110 46 Pfam PF10554 Ash protein family 1 44 2.5E-5 T 06-07-2017 IPR018880 Bacteriophage P4, Ash protein AM402_RS10090 3d408188bb1dc5f87298c11ec173049f 226 Pfam PF08808 RES domain 32 175 3.5E-10 T 06-07-2017 IPR014914 RES domain AM402_RS09395 feb2b7e98932c412748123f7a52b79ed 318 Gene3D G3DSA:2.10.10.20 77 119 5.8E-4 T 06-07-2017 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM402_RS01870 000b6e079ce815a75d05baa5dff46989 189 Pfam PF00398 Ribosomal RNA adenine dimethylase 38 114 2.0E-8 T 06-07-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AM402_RS01870 000b6e079ce815a75d05baa5dff46989 189 SUPERFAMILY SSF53335 14 162 6.04E-19 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS01870 000b6e079ce815a75d05baa5dff46989 189 Gene3D G3DSA:3.40.50.150 35 153 4.5E-13 T 06-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM402_RS18315 dcb46f1a43822b311bf8a9aead11bc65 627 Pfam PF06276 Ferric iron reductase FhuF-like transporter 438 607 1.9E-31 T 06-07-2017 IPR022770 Ferric iron reductase FhuF domain AM402_RS18315 dcb46f1a43822b311bf8a9aead11bc65 627 Pfam PF04183 IucA / IucC family 174 414 4.3E-53 T 06-07-2017 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AM402_RS18115 48f0c9fa9ce1ccdb76229b4d3df3783f 125 Pfam PF09350 Domain of unknown function (DUF1992) 7 72 3.8E-22 T 06-07-2017 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain AM402_RS20955 f5962b29a3a272c6a3ec0a1e29c4eb1a 209 Pfam PF14348 Domain of unknown function (DUF4400) 41 204 2.0E-28 T 06-07-2017 IPR022266 Integrating conjugative element protein, PFL4697-type AM402_RS02165 663dd8332aeb65cefaddbb12d60597d8 134 Pfam PF06836 Protein of unknown function (DUF1240) 39 133 1.1E-34 T 06-07-2017 IPR010665 Protein of unknown function DUF1240 AM402_RS07785 cfa8447496b53d55fa5732dd99001d2f 85 Pfam PF10809 Protein of unknown function (DUF2732) 23 81 1.2E-13 T 06-07-2017 IPR020126 Protein of unknown function DUF2732 AM402_RS21245 6d38e98b51b3e7070b5ed3026b5bcee0 119 Pfam PF04956 TrbC/VIRB2 family 10 106 1.8E-22 T 06-07-2017 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM402_RS17880 7e43b4d3b7a640552a0cbe8160ea7353 184 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 56 158 2.6E-37 T 06-07-2017 IPR022260 Integrating conjugative element protein PilL, PFGI-1 AM402_RS20920 fb1d0a9692aee1a4c63f83fb8f5e1519 305 Pfam PF06586 TraK protein 61 282 2.1E-20 T 06-07-2017 IPR010563 Pilus assembly TraK AM402_RS04515 e87ff5eff901c9646957f7d6e37cad8c 431 Pfam PF13730 Helix-turn-helix domain 54 115 2.8E-16 T 06-07-2017 AM402_RS10200 49f5016c953f620efe9132bde22c00d2 294 Pfam PF04228 Putative neutral zinc metallopeptidase 1 288 1.1E-115 T 06-07-2017 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AM402_RS21740 d2455f9d67550642a0ff1b2df2dc91f3 477 Pfam PF06122 Conjugative relaxosome accessory transposon protein 37 400 7.5E-99 T 06-07-2017 IPR010927 Type IV conjugative transfer system protein TraH AM402_RS19265 47dfe019517048ec97805f906a757cc0 336 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 115 326 3.3E-86 T 06-07-2017 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 AM402_RS19265 47dfe019517048ec97805f906a757cc0 336 Pfam PF01618 MotA/TolQ/ExbB proton channel family 200 308 1.1E-35 T 06-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM402_RS15940 1a71e11390d04883e319a3d46b1b38ed 321 Pfam PF06889 Protein of unknown function (DUF1266) 99 271 2.2E-17 T 06-07-2017 IPR009677 Protein of unknown function DUF1266 AM402_RS19110 2ba56f2bdc53c604fcdcc4fd286b29ac 160 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 4 146 1.7E-48 T 06-07-2017 IPR010351 Protein of unknown function DUF943 AM402_RS20860 f599fee98e3d8d093eafc9453fb77cc4 936 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 770 845 1.6E-26 T 06-07-2017 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM402_RS20860 f599fee98e3d8d093eafc9453fb77cc4 936 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 464 623 1.5E-14 T 06-07-2017 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AM402_RS12040 e0ddb15dffa9176a596ffcdc562d7542 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 82 3.3E-44 T 06-07-2017 IPR019633 Protein of unknown function DUF2498 AM402_RS05910 6f37645f0b691bf4abaa025386d00fbf 104 Pfam PF04380 Membrane fusogenic activity 1 78 1.7E-28 T 06-07-2017 IPR007475 Membrane fusogenic activity AM402_RS00005 5ee402408d14c73e84053ed8460c2450 191 Pfam PF01136 Peptidase family U32 6 111 8.5E-12 T 06-07-2017 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM402_RS17665 533806c13d823f1097edd905b6717ffb 220 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 58 161 5.0E-40 T 06-07-2017 IPR022260 Integrating conjugative element protein PilL, PFGI-1 AM402_RS05520 a4a338bac7bab7641cbdbb37fea0a609 462 Pfam PF06122 Conjugative relaxosome accessory transposon protein 28 388 2.1E-108 T 06-07-2017 IPR010927 Type IV conjugative transfer system protein TraH AM402_RS00865 5bacfa52d051662ea1d9963e5a456200 67 Pfam PF03889 Domain of unknown function 10 47 7.5E-25 T 06-07-2017 IPR005589 Protein of unknown function DUF331 AM402_RS20385 a4b566679d3b0768aa4dceda9edd0dff 448 Pfam PF00860 Permease family 27 408 1.2E-76 T 06-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM402_RS17540 f3ae9ddc593d4a4182217b716cb87125 504 Pfam PF07916 TraG-like protein, N-terminal region 8 484 7.9E-100 T 06-07-2017 IPR012931 TraG-like, N-terminal AM402_RS04555 df4a5974a849cc855ec0e38af0278156 307 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 304 5.5E-47 T 06-07-2017 IPR010106 Conserved hypothetical protein CHP01784 AM402_RS04555 df4a5974a849cc855ec0e38af0278156 307 Pfam PF04754 Putative transposase, YhgA-like 10 211 8.8E-74 T 06-07-2017 IPR006842 Transposase (putative), YhgA-like AM402_RS01385 5e4de0f1ff19b3e58815ab97663c74c6 390 Pfam PF04984 Phage tail sheath protein 1 95 8.2E-14 T 06-07-2017 IPR007067 Tail sheath protein AM402_RS01385 5e4de0f1ff19b3e58815ab97663c74c6 390 Pfam PF04984 Phage tail sheath protein 93 376 7.3E-49 T 06-07-2017 IPR007067 Tail sheath protein AM402_RS15725 3e4ae13e8551e28467fc570f543e8a61 643 Pfam PF05170 AsmA family 1 186 4.6E-15 T 06-07-2017 IPR007844 AsmA AM402_RS15725 3e4ae13e8551e28467fc570f543e8a61 643 Pfam PF05170 AsmA family 241 536 1.6E-14 T 06-07-2017 IPR007844 AsmA AM402_RS05220 bd984e96767c5a8a10a6a9f7f0ffb2a8 64 SUPERFAMILY SSF46955 11 59 2.75E-5 T 06-07-2017 IPR009061 Putative DNA-binding domain AM402_RS16235 b16d8b27506a46a1daf465ecb7b3fbf4 689 Pfam PF04434 SWIM zinc finger 61 81 6.0E-4 T 06-07-2017 IPR007527 Zinc finger, SWIM-type GO:0008270 AM402_RS16545 b8d4d8046be866af3bdddbe5aef4b829 149 ProDom PD033929 YBCN ECS1616 SIMILAR 5'REGION ORF151 RUSA LAMBDOID DLP12 BACTERIOPHAGE PROPHAGE 8 148 5.0E-13 T 06-07-2017 AM402_RS21705 a3d5506828117065b8fa62955e83643a 139 Pfam PF00816 H-NS histone family 52 124 2.2E-6 T 06-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM402_RS15190 93af0f94e1cea3ea7ebba6da44ab8272 78 Pfam PF03527 RHS protein 44 76 8.8E-15 T 06-07-2017 IPR001826 RHS protein AM402_RS10495 5e653b7b8d910f40d7f7565d7d6356a3 90 Pfam PF05449 Putative 3TM holin, Phage_holin_3 10 88 8.0E-20 T 06-07-2017 IPR008473 Putative 3TM holin, Phage holin 3 AM402_RS04780 f2ffd9e5171a569c34f5f21edcd83548 298 Pfam PF11920 Protein of unknown function (DUF3438) 20 288 1.3E-113 T 06-07-2017 IPR021844 Integrating conjugative element protein, PFL4704 AM402_RS04780 f2ffd9e5171a569c34f5f21edcd83548 298 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 24 283 2.5E-102 T 06-07-2017 IPR021844 Integrating conjugative element protein, PFL4704 AM402_RS09175 c53caa15e0f574542ecee3761bbbd43f 489 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 476 17.207 T 06-07-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM402_RS09175 c53caa15e0f574542ecee3761bbbd43f 489 Pfam PF00361 Proton-conducting membrane transporter 122 421 2.6E-75 T 06-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM402_RS09175 c53caa15e0f574542ecee3761bbbd43f 489 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 476 1.1E-123 T 06-07-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM402_RS03275 2b2210edb0723db2a1c2fffc0ff6ee49 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 4.9E-188 T 06-07-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM402_RS03275 2b2210edb0723db2a1c2fffc0ff6ee49 404 Pfam PF03616 Sodium/glutamate symporter 2 366 1.3E-159 T 06-07-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM402_RS14420 e9c2634fd745b6c43857dfc9a857aa81 177 Pfam PF02620 Uncharacterized ACR, COG1399 62 172 2.8E-18 T 06-07-2017 IPR003772 Protein of unknown function DUF177 AM402_RS14035 b4b040fcd04aed15f5566ca19e108a23 116 Pfam PF16462 Phage tail assembly chaperone protein, TAC 4 116 5.1E-41 T 06-07-2017 IPR024410 Phage tail assembly chaperone protein, TAC AM402_RS17620 531799c3f67a345058ec6898dd58a528 201 Pfam PF11140 Protein of unknown function (DUF2913) 11 175 3.2E-27 T 06-07-2017 IPR021316 Protein of unknown function DUF2913 AM402_RS04015 672867c28ad9d946a7cfad4afd08452a 172 Pfam PF15941 FidL-like putative membrane protein 74 163 1.0E-31 T 06-07-2017 IPR031854 Putative membrane protein FidL-like AM402_RS11770 f0b2643ab09aca233bc26e64ea6f91d0 155 Pfam PF05433 Glycine zipper 2TM domain 63 103 1.1E-8 T 06-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 AM402_RS16125 6b37e24546476b36350e0cbafa2c4e31 135 Gene3D G3DSA:3.10.450.50 6 132 2.5E-32 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS16125 6b37e24546476b36350e0cbafa2c4e31 135 SUPERFAMILY SSF54427 10 131 6.93E-21 T 06-07-2017 IPR032710 NTF2-like domain AM402_RS16245 893db9a756ff5372d43eb3cd61a772ca 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 7.3E-35 T 06-07-2017 IPR019663 Uncharacterised protein YbfA AM402_RS10005 abd0819e4c192c281c762a34e934768f 98 Pfam PF13998 MgrB protein 67 94 9.6E-11 T 06-07-2017 IPR020907 PhoP/PhoQ regulator MgrB AM402_RS02115 f2d5c47b4d7a8274981db14a23089288 637 Pfam PF13953 PapC C-terminal domain 558 621 1.9E-7 T 06-07-2017 IPR025949 PapC-like, C-terminal domain AM402_RS02115 f2d5c47b4d7a8274981db14a23089288 637 Pfam PF00577 Outer membrane usher protein 16 547 9.2E-69 T 06-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 Pfam PF02108 Flagellar assembly protein FliH 108 231 8.0E-35 T 06-07-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 196 212 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 127 144 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 145 167 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 213 238 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 65 87 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 168 195 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 88 106 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS09800 72b50d09fb1f60009b1549695143a885 240 PRINTS PR01003 Flagellar assembly protein FliH signature 107 126 8.4E-53 T 06-07-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AM402_RS12870 9016d98b6fd7a73122db6ef6d18b92ae 878 Pfam PF11739 Dicarboxylate transport 665 866 3.2E-66 T 06-07-2017 IPR021730 Dicarboxylate transport AM402_RS04720 f08eaa7fad18a843fa0077607f8472d3 244 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 44 239 4.1E-70 T 06-07-2017 IPR022293 Integrating conjugative element protein, PFL4693 AM402_RS11345 8ec5149fdc66c2f156762cca16914eb5 271 Pfam PF01925 Sulfite exporter TauE/SafE 8 264 7.8E-44 T 06-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 AM402_RS01020 f9587db4ec1ece6799f39367723253bd 65 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 2.6E-13 T 06-07-2017 IPR007419 BFD-like [2Fe-2S]-binding domain AM402_RS10785 f9c2abfcc4b4025997720b16a617ad8a 250 Pfam PF06629 MltA-interacting protein MipA 28 250 1.9E-50 T 06-07-2017 IPR010583 MltA-interacting MipA AM402_RS14925 fa16184a49729d4f50529c889c55101b 285 SUPERFAMILY SSF53474 8 268 2.46E-24 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS14925 fa16184a49729d4f50529c889c55101b 285 Gene3D G3DSA:3.40.50.1820 13 281 3.9E-23 T 06-07-2017 IPR029058 Alpha/Beta hydrolase fold AM402_RS17575 0eaf2116a9d477549dc3de18e078be60 140 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 136 1.0E-47 T 06-07-2017 IPR022262 Lipoprotein, putative AM402_RS18990 33aeed0c6fec0b396990f134e7a5c1da 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 315 5.0E-51 T 06-07-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM402_RS09455 f2c4d7fffc9d91d9e4aede193b7de8ae 109 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 102 1.3E-13 T 06-07-2017 IPR008407 Branched-chain amino acid transport, AzlD AM402_RS05355 c62561c78e0ee80f4bd00cafc32ad435 429 Pfam PF03743 Bacterial conjugation TrbI-like protein 213 416 3.4E-39 T 06-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM402_RS03210 4d65a428415ed11a2099467103e5e997 218 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 11 209 2.6E-96 T 06-07-2017 IPR008517 Protein of unknown function DUF799 AM402_RS10490 c8cc7ba7c563997e6737751475230bff 123 Pfam PF16931 Putative phage holin 9 111 1.4E-14 T 06-07-2017 IPR032637 Putative phage holin-like AM402_RS07845 a4d5fcadf546b9e92dfba908ca59dafe 151 Pfam PF05926 Phage head completion protein (GPL) 16 151 1.5E-56 T 06-07-2017 IPR009225 Bacteriophage head completion protein GpL GO:0019069 AM402_RS09415 e868ed682699349fa1e258b24244a24c 258 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 159 1.0E-28 T 06-07-2017 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AM402_RS06940 5ff5e4e108401df50aecc90406be1064 194 Pfam PF10543 ORF6N domain 14 92 4.3E-17 T 06-07-2017 IPR018873 KilA-N, DNA-binding domain AM402_RS12210 0912afe6442484c8987e9fad266d3133 319 SUPERFAMILY SSF53300 45 242 1.19E-9 T 06-07-2017 IPR002035 von Willebrand factor, type A AM402_RS01580 845a818569aa294277620002300af6cc 232 Pfam PF08889 WbqC-like protein family 7 223 7.3E-64 T 06-07-2017 IPR014985 WbqC-like protein family AM402_RS15065 6c4b05f9e3c34836342e478131a3ba5c 550 Pfam PF02470 MlaD protein 46 137 6.9E-10 T 06-07-2017 IPR003399 Mce/MlaD AM402_RS15065 6c4b05f9e3c34836342e478131a3ba5c 550 Pfam PF02470 MlaD protein 161 221 5.5E-6 T 06-07-2017 IPR003399 Mce/MlaD AM402_RS15065 6c4b05f9e3c34836342e478131a3ba5c 550 Pfam PF02470 MlaD protein 290 393 1.5E-13 T 06-07-2017 IPR003399 Mce/MlaD AM402_RS06480 5a2ab146ed32d961dc3c402a0efe3265 106 Pfam PF04977 Septum formation initiator 21 99 1.3E-27 T 06-07-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AM402_RS06480 5a2ab146ed32d961dc3c402a0efe3265 106 Hamap MF_00599 Cell division protein FtsB [ftsB]. 11 100 31.993 T 06-07-2017 IPR023081 Cell division protein FtsB AM402_RS02050 17e36b3dc6afe38f2d702e32eb0088a9 156 Pfam PF03500 Cellulose synthase subunit D 22 143 1.2E-12 T 06-07-2017 IPR022798 Cellulose synthase subunit D, bacterial AM402_RS14765 2e82d3134a4c7349742a8e487309a130 103 Pfam PF16786 Recombination enhancement, RecA-dependent nuclease 6 73 1.3E-13 T 06-07-2017 IPR031875 Recombination enhancement, RecA-dependent nuclease AM402_RS06690 b35ec78ef1d5179f0470de970ddf8028 311 Pfam PF01148 Cytidylyltransferase family 44 309 2.0E-63 T 06-07-2017 AM402_RS20130 26d1e7a94122f098ffb4150120c344b0 295 Pfam PF10014 2OG-Fe dioxygenase 51 260 4.8E-43 T 06-07-2017 IPR018724 2OG-Fe dioxygenase AM402_RS13205 defd31b6c43c1e3c07208057bfb74d2f 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 1.8E-42 T 06-07-2017 IPR019698 Protein of unknown function DUF2583 AM402_RS04645 33944eb5506d97a69842ff5f20968f77 62 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 55 4.7E-22 T 06-07-2017 IPR010260 Prophage CP4-57 regulatory protein (AlpA) AM402_RS07310 8f1899b4a99fcbdd0771f581819995e6 63 Pfam PF10945 Cellulose biosynthesis protein BcsR 19 58 4.6E-21 T 06-07-2017 IPR024487 Cellulose biosynthesis protein BcsR AM402_RS15900 374ef45b9036774f72c9235c51e2cd32 383 Pfam PF12698 ABC-2 family transporter protein 36 375 3.5E-36 T 06-07-2017 AM402_RS12215 cca0e42cbe3c29c5381a332e5e723208 557 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 494 4.5E-107 T 06-07-2017 IPR010352 Protein of unknown function DUF945 AM402_RS03360 bdeea5e653c10cf7bf5d360ef6a9f9f5 109 Pfam PF07119 Protein of unknown function (DUF1375) 15 77 4.2E-16 T 06-07-2017 IPR010780 Protein of unknown function DUF1375 AM402_RS04415 3c85a2b6f26f938291c11ee69d71a0e6 439 Pfam PF02447 GntP family permease 1 251 1.7E-13 T 06-07-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM402_RS19525 b0b6abfecf28ed9ba02f1867f2ff2df7 130 Pfam PF07681 DoxX 8 87 1.9E-17 T 06-07-2017 IPR032808 DoxX family AM402_RS14710 97088325f464b92ba6b4a3e84eb157df 237 Pfam PF04233 Phage Mu protein F like protein 114 225 2.7E-12 T 06-07-2017 IPR006528 Phage head morphogenesis domain