locus-tag class description CPA52_RS00005 PF00308 Bacterial dnaA protein CPA52_RS00005 PF11638 DnaA N-terminal domain CPA52_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CPA52_RS00010 PF00468 Ribosomal protein L34 CPA52_RS00015 PF00825 Ribonuclease P CPA52_RS00020 PF01809 Putative membrane protein insertion efficiency factor CPA52_RS00025 PF14849 YidC periplasmic domain CPA52_RS00025 PF02096 60Kd inner membrane protein CPA52_RS00030 PF01926 50S ribosome-binding GTPase CPA52_RS00030 PF10396 GTP-binding protein TrmE N-terminus CPA52_RS00030 PF12631 MnmE helical domain CPA52_RS00040 PF00258 Flavodoxin CPA52_RS00045 PF13932 GidA associated domain CPA52_RS00045 PF01134 Glucose inhibited division protein A CPA52_RS00050 PF02527 rRNA small subunit methyltransferase G CPA52_RS00055 PF13614 AAA domain CPA52_RS00060 PF17762 HTH domain found in ParB protein CPA52_RS00060 PF02195 ParB-like nuclease domain CPA52_RS00065 PF03899 ATP synthase I chain CPA52_RS00070 PF00119 ATP synthase A chain CPA52_RS00075 PF00137 ATP synthase subunit C CPA52_RS00080 PF00430 ATP synthase B/B' CF(0) CPA52_RS00085 PF00213 ATP synthase delta (OSCP) subunit CPA52_RS00090 PF00306 ATP synthase alpha/beta chain, C terminal domain CPA52_RS00090 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPA52_RS00090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPA52_RS00095 PF00231 ATP synthase CPA52_RS00100 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPA52_RS00100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPA52_RS00105 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CPA52_RS00105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CPA52_RS00110 PF18500 CadC C-terminal domain 1 CPA52_RS00110 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS00115 PF12804 MobA-like NTP transferase domain CPA52_RS00115 PF00132 Bacterial transferase hexapeptide (six repeats) CPA52_RS00115 PF14602 Hexapeptide repeat of succinyl-transferase CPA52_RS00150 PF14602 Hexapeptide repeat of succinyl-transferase CPA52_RS00150 PF12464 Maltose acetyltransferase CPA52_RS00155 PF00455 DeoR C terminal sensor domain CPA52_RS00155 PF08220 DeoR-like helix-turn-helix domain CPA52_RS00160 PF01380 SIS domain CPA52_RS00170 PF00270 DEAD/DEAH box helicase CPA52_RS00170 PF00271 Helicase conserved C-terminal domain CPA52_RS00200 PF00313 'Cold-shock' DNA-binding domain CPA52_RS00205 PF00313 'Cold-shock' DNA-binding domain CPA52_RS00210 PF03601 Conserved hypothetical protein 698 CPA52_RS00220 PF00248 Aldo/keto reductase family CPA52_RS00225 PF07702 UTRA domain CPA52_RS00225 PF00392 Bacterial regulatory proteins, gntR family CPA52_RS00230 PF01925 Sulfite exporter TauE/SafE CPA52_RS00240 PF00474 Sodium:solute symporter family CPA52_RS00245 PF00593 TonB dependent receptor CPA52_RS00245 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS00250 PF00245 Alkaline phosphatase CPA52_RS00255 PF00245 Alkaline phosphatase CPA52_RS00270 PF02254 TrkA-N domain CPA52_RS00270 PF00999 Sodium/hydrogen exchanger family CPA52_RS00280 PF00005 ABC transporter CPA52_RS00300 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS00300 PF00593 TonB dependent receptor CPA52_RS00320 PF04304 Protein of unknown function (DUF454) CPA52_RS00335 PF01263 Aldose 1-epimerase CPA52_RS00345 PF03703 Bacterial PH domain CPA52_RS00375 PF07963 Prokaryotic N-terminal methylation motif CPA52_RS00375 PF00114 Pilin (bacterial filament) CPA52_RS00380 PF02567 Phenazine biosynthesis-like protein CPA52_RS00395 PF00873 AcrB/AcrD/AcrF family CPA52_RS00400 PF01322 Cytochrome C' CPA52_RS00410 PF00082 Subtilase family CPA52_RS00410 PF02225 PA domain CPA52_RS00410 PF05922 Peptidase inhibitor I9 CPA52_RS00410 PF13860 FlgD Ig-like domain CPA52_RS00415 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CPA52_RS00415 PF00326 Prolyl oligopeptidase family CPA52_RS00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS00420 PF00072 Response regulator receiver domain CPA52_RS00420 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS00420 PF09308 LuxQ, periplasmic CPA52_RS00425 PF00072 Response regulator receiver domain CPA52_RS00425 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS00445 PF09335 SNARE associated Golgi protein CPA52_RS00450 PF02152 Dihydroneopterin aldolase CPA52_RS00455 PF01227 GTP cyclohydrolase I CPA52_RS00465 PF02540 NAD synthase CPA52_RS00470 PF04337 Protein of unknown function, DUF480 CPA52_RS00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS00475 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS00475 PF01627 Hpt domain CPA52_RS00475 PF00072 Response regulator receiver domain CPA52_RS00475 PF00672 HAMP domain CPA52_RS00475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CPA52_RS00480 PF18381 YcaO cyclodehydratase C-terminal domain CPA52_RS00480 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CPA52_RS00490 PF00753 Metallo-beta-lactamase superfamily CPA52_RS00490 PF16123 Hydroxyacylglutathione hydrolase C-terminus CPA52_RS00495 PF00795 Carbon-nitrogen hydrolase CPA52_RS00495 PF00583 Acetyltransferase (GNAT) family CPA52_RS00500 PF00893 Small Multidrug Resistance protein CPA52_RS00525 PF03965 Penicillinase repressor CPA52_RS00530 PF01479 S4 domain CPA52_RS00530 PF00849 RNA pseudouridylate synthase CPA52_RS00550 PF13419 Haloacid dehalogenase-like hydrolase CPA52_RS00555 PF00589 Phage integrase family CPA52_RS00555 PF02899 Phage integrase, N-terminal SAM-like domain CPA52_RS00565 PF01678 Diaminopimelate epimerase CPA52_RS00570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPA52_RS00570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPA52_RS00580 PF01491 Frataxin-like domain CPA52_RS00585 PF02230 Phospholipase/Carboxylesterase CPA52_RS00595 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CPA52_RS00595 PF03900 Porphobilinogen deaminase, C-terminal domain CPA52_RS00610 PF00962 Adenosine/AMP deaminase CPA52_RS00615 PF00571 CBS domain CPA52_RS00615 PF00478 IMP dehydrogenase / GMP reductase domain CPA52_RS00620 PF00175 Oxidoreductase NAD-binding domain CPA52_RS00625 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CPA52_RS00630 PF00672 HAMP domain CPA52_RS00630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS00640 PF05661 Protein of unknown function (DUF808) CPA52_RS00650 PF04389 Peptidase family M28 CPA52_RS00650 PF04151 Bacterial pre-peptidase C-terminal domain CPA52_RS00655 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS00655 PF00593 TonB dependent receptor CPA52_RS00660 PF00270 DEAD/DEAH box helicase CPA52_RS00660 PF00271 Helicase conserved C-terminal domain CPA52_RS00660 PF03880 DbpA RNA binding domain CPA52_RS00670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS00670 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS00670 PF01627 Hpt domain CPA52_RS00670 PF00072 Response regulator receiver domain CPA52_RS00675 PF07498 Rho termination factor, N-terminal domain CPA52_RS00675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPA52_RS00675 PF07497 Rho termination factor, RNA-binding domain CPA52_RS00680 PF00085 Thioredoxin CPA52_RS00685 PF00271 Helicase conserved C-terminal domain CPA52_RS00685 PF00270 DEAD/DEAH box helicase CPA52_RS00690 PF02541 Ppx/GppA phosphatase family CPA52_RS00710 PF00881 Nitroreductase family CPA52_RS00720 PF13718 GNAT acetyltransferase 2 CPA52_RS00720 PF17176 tRNA-binding domain CPA52_RS00720 PF08351 Domain of unknown function (DUF1726) CPA52_RS00720 PF05127 Helicase CPA52_RS00725 PF13361 UvrD-like helicase C-terminal domain CPA52_RS00725 PF00580 UvrD/REP helicase N-terminal domain CPA52_RS00735 PF06062 Uncharacterised protein family (UPF0231) CPA52_RS00745 PF13419 Haloacid dehalogenase-like hydrolase CPA52_RS00750 PF00293 NUDIX domain CPA52_RS00755 PF00459 Inositol monophosphatase family CPA52_RS00775 PF03458 UPF0126 domain CPA52_RS00780 PF01078 Magnesium chelatase, subunit ChlI CPA52_RS00780 PF13335 Magnesium chelatase, subunit ChlI C-terminal CPA52_RS00785 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS00785 PF00072 Response regulator receiver domain CPA52_RS00790 PF00326 Prolyl oligopeptidase family CPA52_RS00790 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CPA52_RS00795 PF01595 Cyclin M transmembrane N-terminal domain CPA52_RS00795 PF00571 CBS domain CPA52_RS00805 PF02667 Short chain fatty acid transporter CPA52_RS00830 PF01553 Acyltransferase CPA52_RS00835 PF00338 Ribosomal protein S10p/S20e CPA52_RS00840 PF00297 Ribosomal protein L3 CPA52_RS00845 PF00573 Ribosomal protein L4/L1 family CPA52_RS00850 PF00276 Ribosomal protein L23 CPA52_RS00855 PF00181 Ribosomal Proteins L2, RNA binding domain CPA52_RS00855 PF03947 Ribosomal Proteins L2, C-terminal domain CPA52_RS00860 PF00203 Ribosomal protein S19 CPA52_RS00865 PF00237 Ribosomal protein L22p/L17e CPA52_RS00870 PF07650 KH domain CPA52_RS00870 PF00189 Ribosomal protein S3, C-terminal domain CPA52_RS00875 PF00252 Ribosomal protein L16p/L10e CPA52_RS00880 PF00831 Ribosomal L29 protein CPA52_RS00885 PF00366 Ribosomal protein S17 CPA52_RS00905 PF04231 Endonuclease I CPA52_RS00910 PF00175 Oxidoreductase NAD-binding domain CPA52_RS00910 PF00258 Flavodoxin CPA52_RS00910 PF00667 FAD binding domain CPA52_RS00915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPA52_RS00915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPA52_RS00920 PF01507 Phosphoadenosine phosphosulfate reductase family CPA52_RS00940 PF00694 Aconitase C-terminal domain CPA52_RS00940 PF00330 Aconitase family (aconitate hydratase) CPA52_RS00970 PF00158 Sigma-54 interaction domain CPA52_RS00970 PF02954 Bacterial regulatory protein, Fis family CPA52_RS00970 PF00072 Response regulator receiver domain CPA52_RS00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS00975 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS00975 PF00989 PAS fold CPA52_RS00985 PF00120 Glutamine synthetase, catalytic domain CPA52_RS00985 PF03951 Glutamine synthetase, beta-Grasp domain CPA52_RS00990 PF00009 Elongation factor Tu GTP binding domain CPA52_RS00990 PF03144 Elongation factor Tu domain 2 CPA52_RS00990 PF00679 Elongation factor G C-terminus CPA52_RS01000 PF02018 Carbohydrate binding domain CPA52_RS01000 PF00331 Glycosyl hydrolase family 10 CPA52_RS01000 PF06452 Carbohydrate family 9 binding domain-like CPA52_RS01010 PF12706 Beta-lactamase superfamily domain CPA52_RS01020 PF03631 Virulence factor BrkB CPA52_RS01025 PF02580 D-Tyr-tRNA(Tyr) deacylase CPA52_RS01035 PF09500 Putative thioesterase (yiiD_Cterm) CPA52_RS01035 PF00583 Acetyltransferase (GNAT) family CPA52_RS01040 PF02253 Phospholipase A1 CPA52_RS01050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPA52_RS01050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPA52_RS01060 PF00701 Dihydrodipicolinate synthetase family CPA52_RS01070 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CPA52_RS01080 PF00330 Aconitase family (aconitate hydratase) CPA52_RS01080 PF11791 Aconitate B N-terminal domain CPA52_RS01080 PF06434 Aconitate hydratase 2 N-terminus CPA52_RS01090 PF00266 Aminotransferase class-V CPA52_RS01105 PF01263 Aldose 1-epimerase CPA52_RS01115 PF04820 Tryptophan halogenase CPA52_RS01125 PF00474 Sodium:solute symporter family CPA52_RS01130 PF16875 Glycosyl hydrolase family 36 N-terminal domain CPA52_RS01130 PF16874 Glycosyl hydrolase family 36 C-terminal domain CPA52_RS01135 PF07729 FCD domain CPA52_RS01135 PF00392 Bacterial regulatory proteins, gntR family CPA52_RS01145 PF05035 2-keto-3-deoxy-galactonokinase CPA52_RS01150 PF01266 FAD dependent oxidoreductase CPA52_RS01150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CPA52_RS01155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPA52_RS01155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPA52_RS01165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CPA52_RS01165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CPA52_RS01170 PF10509 Galactokinase galactose-binding signature CPA52_RS01170 PF00288 GHMP kinases N terminal domain CPA52_RS01170 PF08544 GHMP kinases C terminal CPA52_RS01175 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CPA52_RS01175 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CPA52_RS01180 PF16363 GDP-mannose 4,6 dehydratase CPA52_RS01185 PF00106 short chain dehydrogenase CPA52_RS01195 PF00117 Glutamine amidotransferase class-I CPA52_RS01205 PF00202 Aminotransferase class-III CPA52_RS01210 PF04958 Arginine N-succinyltransferase beta subunit CPA52_RS01215 PF00171 Aldehyde dehydrogenase family CPA52_RS01225 PF02566 OsmC-like protein CPA52_RS01230 PF02675 S-adenosylmethionine decarboxylase CPA52_RS01260 PF08386 TAP-like protein CPA52_RS01260 PF00561 alpha/beta hydrolase fold CPA52_RS01280 PF00459 Inositol monophosphatase family CPA52_RS01290 PF03600 Citrate transporter CPA52_RS01290 PF02080 TrkA-C domain CPA52_RS01295 PF00009 Elongation factor Tu GTP binding domain CPA52_RS01300 PF01507 Phosphoadenosine phosphosulfate reductase family CPA52_RS01305 PF10414 Sirohaem synthase dimerisation region CPA52_RS01305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPA52_RS01305 PF14824 Sirohaem biosynthesis protein central CPA52_RS01310 PF01791 DeoC/LacD family aldolase CPA52_RS01325 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CPA52_RS01330 PF00467 KOW motif CPA52_RS01330 PF02357 Transcription termination factor nusG CPA52_RS01335 PF00298 Ribosomal protein L11, RNA binding domain CPA52_RS01335 PF03946 Ribosomal protein L11, N-terminal domain CPA52_RS01340 PF00687 Ribosomal protein L1p/L10e family CPA52_RS01345 PF00466 Ribosomal protein L10 CPA52_RS01350 PF16320 Ribosomal protein L7/L12 dimerisation domain CPA52_RS01350 PF00542 Ribosomal protein L7/L12 C-terminal domain CPA52_RS01355 PF04563 RNA polymerase beta subunit CPA52_RS01355 PF04561 RNA polymerase Rpb2, domain 2 CPA52_RS01355 PF04565 RNA polymerase Rpb2, domain 3 CPA52_RS01355 PF10385 RNA polymerase beta subunit external 1 domain CPA52_RS01355 PF00562 RNA polymerase Rpb2, domain 6 CPA52_RS01355 PF04560 RNA polymerase Rpb2, domain 7 CPA52_RS01360 PF04983 RNA polymerase Rpb1, domain 3 CPA52_RS01360 PF05000 RNA polymerase Rpb1, domain 4 CPA52_RS01360 PF04998 RNA polymerase Rpb1, domain 5 CPA52_RS01360 PF04997 RNA polymerase Rpb1, domain 1 CPA52_RS01360 PF00623 RNA polymerase Rpb1, domain 2 CPA52_RS01365 PF00164 Ribosomal protein S12/S23 CPA52_RS01370 PF00177 Ribosomal protein S7p/S5e CPA52_RS01375 PF14492 Elongation Factor G, domain II CPA52_RS01375 PF03764 Elongation factor G, domain IV CPA52_RS01375 PF00009 Elongation factor Tu GTP binding domain CPA52_RS01375 PF03144 Elongation factor Tu domain 2 CPA52_RS01375 PF00679 Elongation factor G C-terminus CPA52_RS01380 PF03144 Elongation factor Tu domain 2 CPA52_RS01380 PF00009 Elongation factor Tu GTP binding domain CPA52_RS01380 PF03143 Elongation factor Tu C-terminal domain CPA52_RS01385 PF03853 YjeF-related protein N-terminus CPA52_RS01385 PF01256 Carbohydrate kinase CPA52_RS01400 PF00005 ABC transporter CPA52_RS01400 PF13732 Domain of unknown function (DUF4162) CPA52_RS01420 PF00239 Resolvase, N terminal domain CPA52_RS01420 PF02796 Helix-turn-helix domain of resolvase CPA52_RS01430 PF00118 TCP-1/cpn60 chaperonin family CPA52_RS01435 PF00166 Chaperonin 10 Kd subunit CPA52_RS01440 PF04186 FxsA cytoplasmic membrane protein CPA52_RS01445 PF03091 CutA1 divalent ion tolerance protein CPA52_RS01450 PF11412 Disulphide bond corrector protein DsbC CPA52_RS01450 PF02683 Cytochrome C biogenesis protein transmembrane region CPA52_RS01455 PF01220 Dehydroquinase class II CPA52_RS01460 PF00364 Biotin-requiring enzyme CPA52_RS01465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPA52_RS01465 PF00289 Biotin carboxylase, N-terminal domain CPA52_RS01465 PF02785 Biotin carboxylase C-terminal domain CPA52_RS01470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CPA52_RS01475 PF01520 N-acetylmuramoyl-L-alanine amidase CPA52_RS01480 PF01119 DNA mismatch repair protein, C-terminal domain CPA52_RS01480 PF08676 MutL C terminal dimerisation domain CPA52_RS01490 PF17209 Hfq protein CPA52_RS01495 PF16360 GTP-binding GTPase Middle Region CPA52_RS01495 PF01926 50S ribosome-binding GTPase CPA52_RS01495 PF13167 GTP-binding GTPase N-terminal CPA52_RS01500 PF12221 Bacterial membrane protein N terminal CPA52_RS01500 PF01145 SPFH domain / Band 7 family CPA52_RS01505 PF01145 SPFH domain / Band 7 family CPA52_RS01510 PF00709 Adenylosuccinate synthetase CPA52_RS01515 PF08238 Sel1 repeat CPA52_RS01525 PF00696 Amino acid kinase family CPA52_RS01530 PF00171 Aldehyde dehydrogenase family CPA52_RS01535 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS01535 PF00563 EAL domain CPA52_RS01535 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS01540 PF09308 LuxQ, periplasmic CPA52_RS01540 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS01540 PF00072 Response regulator receiver domain CPA52_RS01570 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CPA52_RS01575 PF00034 Cytochrome c CPA52_RS01580 PF00596 Class II Aldolase and Adducin N-terminal domain CPA52_RS01585 PF13378 Enolase C-terminal domain-like CPA52_RS01585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CPA52_RS01605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPA52_RS01610 PF01476 LysM domain CPA52_RS01610 PF01464 Transglycosylase SLT domain CPA52_RS01630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CPA52_RS01635 PF03831 PhnA domain CPA52_RS01635 PF08274 PhnA Zinc-Ribbon CPA52_RS01645 PF00563 EAL domain CPA52_RS01645 PF08668 HDOD domain CPA52_RS01670 PF00873 AcrB/AcrD/AcrF family CPA52_RS01680 PF02541 Ppx/GppA phosphatase family CPA52_RS01685 PF13089 Polyphosphate kinase N-terminal domain CPA52_RS01685 PF02503 Polyphosphate kinase middle domain CPA52_RS01685 PF17941 Polyphosphate kinase C-terminal domain 1 CPA52_RS01685 PF13090 Polyphosphate kinase C-terminal domain 2 CPA52_RS01695 PF00528 Binding-protein-dependent transport system inner membrane component CPA52_RS01700 PF00528 Binding-protein-dependent transport system inner membrane component CPA52_RS01705 PF00005 ABC transporter CPA52_RS01710 PF01895 PhoU domain CPA52_RS01715 PF01865 Protein of unknown function DUF47 CPA52_RS01720 PF01384 Phosphate transporter family CPA52_RS01725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS01725 PF03466 LysR substrate binding domain CPA52_RS01735 PF08448 PAS fold CPA52_RS01735 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS01735 PF00563 EAL domain CPA52_RS01740 PF02547 Queuosine biosynthesis protein CPA52_RS01745 PF01702 Queuine tRNA-ribosyltransferase CPA52_RS01750 PF02699 Preprotein translocase subunit CPA52_RS01755 PF02355 Protein export membrane protein CPA52_RS01755 PF13721 SecD export protein N-terminal TM region CPA52_RS01755 PF07549 SecD/SecF GG Motif CPA52_RS01760 PF02355 Protein export membrane protein CPA52_RS01760 PF07549 SecD/SecF GG Motif CPA52_RS01765 PF00563 EAL domain CPA52_RS01775 PF00459 Inositol monophosphatase family CPA52_RS01790 PF04972 BON domain CPA52_RS01795 PF01679 Proteolipid membrane potential modulator CPA52_RS01815 PF03466 LysR substrate binding domain CPA52_RS01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS01835 PF01810 LysE type translocator CPA52_RS01850 PF00850 Histone deacetylase domain CPA52_RS01865 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS01865 PF00563 EAL domain CPA52_RS01865 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS01870 PF02844 Phosphoribosylglycinamide synthetase, N domain CPA52_RS01870 PF02843 Phosphoribosylglycinamide synthetase, C domain CPA52_RS01870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPA52_RS01880 PF01808 AICARFT/IMPCHase bienzyme CPA52_RS01880 PF02142 MGS-like domain CPA52_RS01885 PF02954 Bacterial regulatory protein, Fis family CPA52_RS01890 PF01207 Dihydrouridine synthase (Dus) CPA52_RS01900 PF04546 Sigma-70, non-essential region CPA52_RS01900 PF00140 Sigma-70 factor, region 1.2 CPA52_RS01900 PF04542 Sigma-70 region 2 CPA52_RS01900 PF04539 Sigma-70 region 3 CPA52_RS01900 PF04545 Sigma-70, region 4 CPA52_RS01900 PF03979 Sigma-70 factor, region 1.1 CPA52_RS01905 PF10410 DnaB-helicase binding domain of primase CPA52_RS01905 PF08275 DNA primase catalytic core, N-terminal domain CPA52_RS01905 PF01807 CHC2 zinc finger CPA52_RS01905 PF08278 DNA primase DnaG DnaB-binding CPA52_RS01915 PF01165 Ribosomal protein S21 CPA52_RS01925 PF00448 SRP54-type protein, GTPase domain CPA52_RS01925 PF02881 SRP54-type protein, helical bundle domain CPA52_RS01930 PF00005 ABC transporter CPA52_RS01935 PF18075 FtsX extracellular domain CPA52_RS01940 PF04545 Sigma-70, region 4 CPA52_RS01940 PF04542 Sigma-70 region 2 CPA52_RS01940 PF00140 Sigma-70 factor, region 1.2 CPA52_RS01960 PF13180 PDZ domain CPA52_RS01960 PF03572 Peptidase family S41 CPA52_RS01965 PF01551 Peptidase family M23 CPA52_RS01970 PF01676 Metalloenzyme superfamily CPA52_RS01970 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CPA52_RS01975 PF00581 Rhodanese-like domain CPA52_RS01980 PF00462 Glutaredoxin CPA52_RS01985 PF02556 Preprotein translocase subunit SecB CPA52_RS01990 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPA52_RS01990 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPA52_RS01995 PF00588 SpoU rRNA Methylase family CPA52_RS02000 PF16916 Dimerisation domain of Zinc Transporter CPA52_RS02000 PF01545 Cation efflux family CPA52_RS02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS02010 PF00672 HAMP domain CPA52_RS02010 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS02010 PF16527 Two-component sensor protein CpxA, periplasmic domain CPA52_RS02015 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS02015 PF00072 Response regulator receiver domain CPA52_RS02025 PF03884 DNA gyrase inhibitor YacG CPA52_RS02030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CPA52_RS02030 PF00437 Type II/IV secretion system protein CPA52_RS02035 PF01121 Dephospho-CoA kinase CPA52_RS02040 PF01478 Type IV leader peptidase family CPA52_RS02040 PF06750 Bacterial Peptidase A24 N-terminal domain CPA52_RS02045 PF00482 Type II secretion system (T2SS), protein F CPA52_RS02055 PF00114 Pilin (bacterial filament) CPA52_RS02055 PF07963 Prokaryotic N-terminal methylation motif CPA52_RS02060 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CPA52_RS02060 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CPA52_RS02065 PF01510 N-acetylmuramoyl-L-alanine amidase CPA52_RS02070 PF03186 CobD/Cbib protein CPA52_RS02075 PF07729 FCD domain CPA52_RS02075 PF00392 Bacterial regulatory proteins, gntR family CPA52_RS02080 PF17831 Pyruvate dehydrogenase E1 component middle domain CPA52_RS02080 PF00456 Transketolase, thiamine diphosphate binding domain CPA52_RS02085 PF00364 Biotin-requiring enzyme CPA52_RS02085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPA52_RS02085 PF02817 e3 binding domain CPA52_RS02090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPA52_RS02090 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS02095 PF03942 DTW domain CPA52_RS02100 PF13416 Bacterial extracellular solute-binding protein CPA52_RS02110 PF00005 ABC transporter CPA52_RS02110 PF08402 TOBE domain CPA52_RS02120 PF01316 Arginine repressor, DNA binding domain CPA52_RS02120 PF02863 Arginine repressor, C-terminal domain CPA52_RS02125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPA52_RS02125 PF00056 lactate/malate dehydrogenase, NAD binding domain CPA52_RS02130 PF00348 Polyprenyl synthetase CPA52_RS02135 PF00829 Ribosomal prokaryotic L21 protein CPA52_RS02140 PF01016 Ribosomal L27 protein CPA52_RS02145 PF01926 50S ribosome-binding GTPase CPA52_RS02145 PF01018 GTP1/OBG CPA52_RS02150 PF00186 Dihydrofolate reductase CPA52_RS02160 PF07676 WD40-like Beta Propeller Repeat CPA52_RS02160 PF00326 Prolyl oligopeptidase family CPA52_RS02165 PF00440 Bacterial regulatory proteins, tetR family CPA52_RS02170 PF04127 DNA / pantothenate metabolism flavoprotein CPA52_RS02170 PF02441 Flavoprotein CPA52_RS02175 PF04002 RadC-like JAB domain CPA52_RS02180 PF00830 Ribosomal L28 family CPA52_RS02185 PF00471 Ribosomal protein L33 CPA52_RS02190 PF04151 Bacterial pre-peptidase C-terminal domain CPA52_RS02190 PF00082 Subtilase family CPA52_RS02205 PF01368 DHH family CPA52_RS02205 PF02833 DHHA2 domain CPA52_RS02215 PF06827 Zinc finger found in FPG and IleRS CPA52_RS02215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CPA52_RS02215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CPA52_RS02220 PF00672 HAMP domain CPA52_RS02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS02225 PF00149 Calcineurin-like phosphoesterase CPA52_RS02230 PF04379 ApaG domain CPA52_RS02235 PF00398 Ribosomal RNA adenine dimethylase CPA52_RS02240 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CPA52_RS02245 PF09312 SurA N-terminal domain CPA52_RS02250 PF04453 LPS transport system D CPA52_RS02250 PF03968 OstA-like protein CPA52_RS02255 PF01636 Phosphotransferase enzyme family CPA52_RS02260 PF00483 Nucleotidyl transferase CPA52_RS02265 PF00226 DnaJ domain CPA52_RS02265 PF05099 Tellurite resistance protein TerB CPA52_RS02275 PF00849 RNA pseudouridylate synthase CPA52_RS02285 PF18339 RapA N-terminal Tudor like domain 1 CPA52_RS02285 PF00176 SNF2 family N-terminal domain CPA52_RS02285 PF12137 RNA polymerase recycling family C-terminal CPA52_RS02285 PF18337 RapA N-terminal Tudor like domain CPA52_RS02285 PF00271 Helicase conserved C-terminal domain CPA52_RS02290 PF13638 PIN domain CPA52_RS02290 PF02562 PhoH-like protein CPA52_RS02295 PF13638 PIN domain CPA52_RS02295 PF02562 PhoH-like protein CPA52_RS02320 PF00665 Integrase core domain CPA52_RS02320 PF13936 Helix-turn-helix domain CPA52_RS02345 PF00672 HAMP domain CPA52_RS02345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS02355 PF02562 PhoH-like protein CPA52_RS02355 PF13638 PIN domain CPA52_RS02360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CPA52_RS02360 PF00072 Response regulator receiver domain CPA52_RS02360 PF00672 HAMP domain CPA52_RS02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS02360 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS02360 PF01627 Hpt domain CPA52_RS02365 PF00360 Phytochrome region CPA52_RS02365 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS02365 PF01590 GAF domain CPA52_RS02365 PF00563 EAL domain CPA52_RS02375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPA52_RS02375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPA52_RS02380 PF13411 MerR HTH family regulatory protein CPA52_RS02385 PF03773 Predicted permease CPA52_RS02395 PF06945 Protein of unknown function (DUF1289) CPA52_RS02415 PF00563 EAL domain CPA52_RS02415 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS02415 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS02420 PF00583 Acetyltransferase (GNAT) family CPA52_RS02420 PF13380 CoA binding domain CPA52_RS02420 PF13607 Succinyl-CoA ligase like flavodoxin domain CPA52_RS02440 PF04055 Radical SAM superfamily CPA52_RS02440 PF06969 HemN C-terminal domain CPA52_RS02445 PF01725 Ham1 family CPA52_RS02455 PF02325 YGGT family CPA52_RS02460 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPA52_RS02460 PF03807 NADP oxidoreductase coenzyme F420-dependent CPA52_RS02465 PF01168 Alanine racemase, N-terminal domain CPA52_RS02470 PF00437 Type II/IV secretion system protein CPA52_RS02475 PF00437 Type II/IV secretion system protein CPA52_RS02480 PF03652 Holliday junction resolvase CPA52_RS02485 PF02622 Uncharacterized ACR, COG1678 CPA52_RS02490 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CPA52_RS02490 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CPA52_RS02495 PF04452 RNA methyltransferase CPA52_RS02510 PF03710 Glutamate-ammonia ligase adenylyltransferase CPA52_RS02510 PF08335 GlnD PII-uridylyltransferase CPA52_RS02520 PF03279 Bacterial lipid A biosynthesis acyltransferase CPA52_RS02525 PF02321 Outer membrane efflux protein CPA52_RS02530 PF00293 NUDIX domain CPA52_RS02535 PF06853 Protein of unknown function (DUF1249) CPA52_RS02540 PF00149 Calcineurin-like phosphoesterase CPA52_RS02545 PF05728 Uncharacterised protein family (UPF0227) CPA52_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS02550 PF01751 Toprim domain CPA52_RS02550 PF00204 DNA gyrase B CPA52_RS02550 PF00986 DNA gyrase B subunit, carboxyl terminus CPA52_RS02555 PF07995 Glucose / Sorbosone dehydrogenase CPA52_RS02560 PF03989 DNA gyrase C-terminal domain, beta-propeller CPA52_RS02560 PF00521 DNA gyrase/topoisomerase IV, subunit A CPA52_RS02565 PF01553 Acyltransferase CPA52_RS02570 PF06877 Regulator of ribonuclease activity B CPA52_RS02575 PF01544 CorA-like Mg2+ transporter protein CPA52_RS02580 PF18030 RimK PreATP-grasp domain CPA52_RS02580 PF08443 RimK-like ATP-grasp domain CPA52_RS02585 PF18030 RimK PreATP-grasp domain CPA52_RS02585 PF08443 RimK-like ATP-grasp domain CPA52_RS02610 PF00271 Helicase conserved C-terminal domain CPA52_RS02610 PF00570 HRDC domain CPA52_RS02610 PF16124 RecQ zinc-binding CPA52_RS02610 PF09382 RQC domain CPA52_RS02610 PF00270 DEAD/DEAH box helicase CPA52_RS02615 PF03061 Thioesterase superfamily CPA52_RS02620 PF00892 EamA-like transporter family CPA52_RS02625 PF00072 Response regulator receiver domain CPA52_RS02625 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS02630 PF04219 Protein of unknown function, DUF CPA52_RS02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS02635 PF03466 LysR substrate binding domain CPA52_RS02640 PF00267 Gram-negative porin CPA52_RS02645 PF00005 ABC transporter CPA52_RS02650 PF01032 FecCD transport family CPA52_RS02655 PF07685 CobB/CobQ-like glutamine amidotransferase domain CPA52_RS02655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPA52_RS02660 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CPA52_RS02660 PF12557 Cob(I)alamin adenosyltransferase N terminal CPA52_RS02665 PF01497 Periplasmic binding protein CPA52_RS02670 PF03167 Uracil DNA glycosylase superfamily CPA52_RS02680 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPA52_RS02685 PF03883 Peroxide stress protein YaaA CPA52_RS02695 PF00924 Mechanosensitive ion channel CPA52_RS02705 PF00271 Helicase conserved C-terminal domain CPA52_RS02705 PF00270 DEAD/DEAH box helicase CPA52_RS02710 PF05175 Methyltransferase small domain CPA52_RS02715 PF00128 Alpha amylase, catalytic domain CPA52_RS02715 PF02806 Alpha amylase, C-terminal all-beta domain CPA52_RS02720 PF00258 Flavodoxin CPA52_RS02725 PF00589 Phage integrase family CPA52_RS02725 PF02899 Phage integrase, N-terminal SAM-like domain CPA52_RS02730 PF10411 Disulfide bond isomerase protein N-terminus CPA52_RS02730 PF13098 Thioredoxin-like domain CPA52_RS02735 PF17768 RecJ OB domain CPA52_RS02735 PF02272 DHHA1 domain CPA52_RS02735 PF01368 DHH family CPA52_RS02745 PF00152 tRNA synthetases class II (D, K and N) CPA52_RS02745 PF01336 OB-fold nucleic acid binding domain CPA52_RS02775 PF07075 Protein of unknown function (DUF1343) CPA52_RS02780 PF00144 Beta-lactamase CPA52_RS02785 PF03553 Na+/H+ antiporter family CPA52_RS02815 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPA52_RS02830 PF00925 GTP cyclohydrolase II CPA52_RS02840 PF02631 RecX family CPA52_RS02845 PF02272 DHHA1 domain CPA52_RS02845 PF01411 tRNA synthetases class II (A) CPA52_RS02845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPA52_RS02850 PF00696 Amino acid kinase family CPA52_RS02850 PF01842 ACT domain CPA52_RS02850 PF13840 ACT domain CPA52_RS02855 PF02599 Global regulator protein family CPA52_RS02875 PF04277 Oxaloacetate decarboxylase, gamma chain CPA52_RS02880 PF00682 HMGL-like CPA52_RS02880 PF02436 Conserved carboxylase domain CPA52_RS02880 PF00364 Biotin-requiring enzyme CPA52_RS02885 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CPA52_RS02890 PF00248 Aldo/keto reductase family CPA52_RS02895 PF01476 LysM domain CPA52_RS02895 PF01551 Peptidase family M23 CPA52_RS02900 PF00579 tRNA synthetases class I (W and Y) CPA52_RS02910 PF01048 Phosphorylase superfamily CPA52_RS02920 PF02649 Type I GTP cyclohydrolase folE2 CPA52_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS02925 PF01627 Hpt domain CPA52_RS02925 PF00989 PAS fold CPA52_RS02925 PF00072 Response regulator receiver domain CPA52_RS02925 PF18415 Histidine kinase receptor ArcB trans-membrane domain CPA52_RS02925 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS02930 PF00072 Response regulator receiver domain CPA52_RS02930 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS02935 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS02935 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPA52_RS02940 PF05175 Methyltransferase small domain CPA52_RS02940 PF08468 Methyltransferase small domain N-terminal CPA52_RS02945 PF02390 Putative methyltransferase CPA52_RS02950 PF00633 Helix-hairpin-helix motif CPA52_RS02950 PF00730 HhH-GPD superfamily base excision DNA repair protein CPA52_RS02950 PF14815 NUDIX domain CPA52_RS02950 PF10576 Iron-sulfur binding domain of endonuclease III CPA52_RS02955 PF04362 Bacterial Fe(2+) trafficking CPA52_RS02960 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS02960 PF00672 HAMP domain CPA52_RS02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS02960 PF01627 Hpt domain CPA52_RS02960 PF00072 Response regulator receiver domain CPA52_RS02960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CPA52_RS02995 PF02321 Outer membrane efflux protein CPA52_RS02995 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CPA52_RS03005 PF00873 AcrB/AcrD/AcrF family CPA52_RS03015 PF03695 Uncharacterised protein family (UPF0149) CPA52_RS03020 PF00557 Metallopeptidase family M24 CPA52_RS03020 PF05195 Aminopeptidase P, N-terminal domain CPA52_RS03025 PF01494 FAD binding domain CPA52_RS03030 PF01494 FAD binding domain CPA52_RS03045 PF01250 Ribosomal protein S6 CPA52_RS03050 PF00436 Single-strand binding protein family CPA52_RS03055 PF01084 Ribosomal protein S18 CPA52_RS03060 PF01281 Ribosomal protein L9, N-terminal domain CPA52_RS03060 PF03948 Ribosomal protein L9, C-terminal domain CPA52_RS03065 PF04542 Sigma-70 region 2 CPA52_RS03065 PF08281 Sigma-70, region 4 CPA52_RS03080 PF00772 DnaB-like helicase N terminal domain CPA52_RS03080 PF03796 DnaB-like helicase C terminal domain CPA52_RS03085 PF01168 Alanine racemase, N-terminal domain CPA52_RS03085 PF00842 Alanine racemase, C-terminal domain CPA52_RS03120 PF00563 EAL domain CPA52_RS03120 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS03120 PF08448 PAS fold CPA52_RS03125 PF00072 Response regulator receiver domain CPA52_RS03125 PF01966 HD domain CPA52_RS03135 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CPA52_RS03140 PF10458 Valyl tRNA synthetase tRNA binding arm CPA52_RS03140 PF08264 Anticodon-binding domain of tRNA CPA52_RS03140 PF00133 tRNA synthetases class I (I, L, M and V) CPA52_RS03145 PF04364 DNA polymerase III chi subunit, HolC CPA52_RS03150 PF00883 Cytosol aminopeptidase family, catalytic domain CPA52_RS03150 PF02789 Cytosol aminopeptidase family, N-terminal domain CPA52_RS03155 PF03739 Lipopolysaccharide export system permease LptF/LptG CPA52_RS03160 PF03739 Lipopolysaccharide export system permease LptF/LptG CPA52_RS03175 PF01590 GAF domain CPA52_RS03175 PF00360 Phytochrome region CPA52_RS03175 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS03175 PF00563 EAL domain CPA52_RS03195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS03195 PF03466 LysR substrate binding domain CPA52_RS03200 PF00248 Aldo/keto reductase family CPA52_RS03205 PF00128 Alpha amylase, catalytic domain CPA52_RS03205 PF03714 Bacterial pullanase-associated domain CPA52_RS03205 PF02806 Alpha amylase, C-terminal all-beta domain CPA52_RS03215 PF01546 Peptidase family M20/M25/M40 CPA52_RS03215 PF07687 Peptidase dimerisation domain CPA52_RS03235 PF00593 TonB dependent receptor CPA52_RS03235 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS03270 PF01548 Transposase CPA52_RS03270 PF02371 Transposase IS116/IS110/IS902 family CPA52_RS03285 PF00171 Aldehyde dehydrogenase family CPA52_RS03290 PF00293 NUDIX domain CPA52_RS03295 PF00072 Response regulator receiver domain CPA52_RS03295 PF02954 Bacterial regulatory protein, Fis family CPA52_RS03295 PF00158 Sigma-54 interaction domain CPA52_RS03305 PF08446 PAS fold CPA52_RS03305 PF01590 GAF domain CPA52_RS03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS03305 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS03305 PF00360 Phytochrome region CPA52_RS03310 PF00072 Response regulator receiver domain CPA52_RS03315 PF01627 Hpt domain CPA52_RS03315 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPA52_RS03315 PF00072 Response regulator receiver domain CPA52_RS03315 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS03320 PF01557 Fumarylacetoacetate (FAA) hydrolase family CPA52_RS03330 PF00248 Aldo/keto reductase family CPA52_RS03340 PF00817 impB/mucB/samB family CPA52_RS03340 PF11799 impB/mucB/samB family C-terminal domain CPA52_RS03340 PF11798 IMS family HHH motif CPA52_RS03345 PF00883 Cytosol aminopeptidase family, catalytic domain CPA52_RS03350 PF00672 HAMP domain CPA52_RS03350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS03350 PF17200 Single Cache domain 2 CPA52_RS03355 PF00326 Prolyl oligopeptidase family CPA52_RS03355 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CPA52_RS03380 PF04381 Putative exonuclease, RdgC CPA52_RS03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS03385 PF08447 PAS fold CPA52_RS03385 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS03385 PF00989 PAS fold CPA52_RS03390 PF00072 Response regulator receiver domain CPA52_RS03395 PF13840 ACT domain CPA52_RS03395 PF01842 ACT domain CPA52_RS03395 PF03447 Homoserine dehydrogenase, NAD binding domain CPA52_RS03395 PF00696 Amino acid kinase family CPA52_RS03395 PF00742 Homoserine dehydrogenase CPA52_RS03400 PF00288 GHMP kinases N terminal domain CPA52_RS03400 PF08544 GHMP kinases C terminal CPA52_RS03405 PF00291 Pyridoxal-phosphate dependent enzyme CPA52_RS03405 PF14821 Threonine synthase N terminus CPA52_RS03410 PF00464 Serine hydroxymethyltransferase CPA52_RS03415 PF03477 ATP cone domain CPA52_RS03420 PF01872 RibD C-terminal domain CPA52_RS03420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPA52_RS03425 PF00677 Lumazine binding domain CPA52_RS03430 PF00925 GTP cyclohydrolase II CPA52_RS03430 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPA52_RS03435 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPA52_RS03440 PF01029 NusB family CPA52_RS03445 PF02769 AIR synthase related protein, C-terminal domain CPA52_RS03445 PF00586 AIR synthase related protein, N-terminal domain CPA52_RS03450 PF04608 Phosphatidylglycerophosphatase A CPA52_RS03455 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS03465 PF02779 Transketolase, pyrimidine binding domain CPA52_RS03465 PF02780 Transketolase, C-terminal domain CPA52_RS03465 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CPA52_RS03470 PF00348 Polyprenyl synthetase CPA52_RS03475 PF02609 Exonuclease VII small subunit CPA52_RS03480 PF01618 MotA/TolQ/ExbB proton channel family CPA52_RS03485 PF13677 Membrane MotB of proton-channel complex MotA/MotB CPA52_RS03485 PF00691 OmpA family CPA52_RS03490 PF01751 Toprim domain CPA52_RS03490 PF01131 DNA topoisomerase CPA52_RS03495 PF07687 Peptidase dimerisation domain CPA52_RS03495 PF01546 Peptidase family M20/M25/M40 CPA52_RS03500 PF00085 Thioredoxin CPA52_RS03525 PF04960 Glutaminase CPA52_RS03530 PF00294 pfkB family carbohydrate kinase CPA52_RS03535 PF14437 MafB19-like deaminase CPA52_RS03540 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPA52_RS03540 PF01464 Transglycosylase SLT domain CPA52_RS03545 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CPA52_RS03545 PF02769 AIR synthase related protein, C-terminal domain CPA52_RS03545 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CPA52_RS03555 PF13617 YnbE-like lipoprotein CPA52_RS03560 PF07027 Protein of unknown function (DUF1318) CPA52_RS03570 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CPA52_RS03575 PF13580 SIS domain CPA52_RS03580 PF00294 pfkB family carbohydrate kinase CPA52_RS03580 PF01467 Cytidylyltransferase-like CPA52_RS03595 PF00534 Glycosyl transferases group 1 CPA52_RS03605 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CPA52_RS03615 PF00155 Aminotransferase class I and II CPA52_RS03620 PF00107 Zinc-binding dehydrogenase CPA52_RS03620 PF08240 Alcohol dehydrogenase GroES-like domain CPA52_RS03625 PF00581 Rhodanese-like domain CPA52_RS03630 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CPA52_RS03630 PF01694 Rhomboid family CPA52_RS03640 PF04345 Chorismate lyase CPA52_RS03645 PF01040 UbiA prenyltransferase family CPA52_RS03655 PF03466 LysR substrate binding domain CPA52_RS03655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS03675 PF00814 Glycoprotease family CPA52_RS03680 PF02660 Glycerol-3-phosphate acyltransferase CPA52_RS03690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CPA52_RS03695 PF02673 Bacitracin resistance protein BacA CPA52_RS03705 PF08245 Mur ligase middle domain CPA52_RS03705 PF02875 Mur ligase family, glutamate ligase domain CPA52_RS03705 PF01225 Mur ligase family, catalytic domain CPA52_RS03710 PF02441 Flavoprotein CPA52_RS03715 PF00005 ABC transporter CPA52_RS03720 PF01061 ABC-2 type transporter CPA52_RS03725 PF02390 Putative methyltransferase CPA52_RS03730 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS03730 PF10442 FIST C domain CPA52_RS03730 PF08495 FIST N domain CPA52_RS03730 PF00563 EAL domain CPA52_RS03735 PF00282 Pyridoxal-dependent decarboxylase conserved domain CPA52_RS03740 PF07687 Peptidase dimerisation domain CPA52_RS03740 PF01546 Peptidase family M20/M25/M40 CPA52_RS03745 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPA52_RS03745 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPA52_RS03750 PF00696 Amino acid kinase family CPA52_RS03755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPA52_RS03755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPA52_RS03760 PF00764 Arginosuccinate synthase CPA52_RS03765 PF00206 Lyase CPA52_RS03765 PF14698 Argininosuccinate lyase C-terminal CPA52_RS03765 PF00583 Acetyltransferase (GNAT) family CPA52_RS03810 PF01467 Cytidylyltransferase-like CPA52_RS03815 PF08360 QacR-like protein, C-terminal region CPA52_RS03815 PF00440 Bacterial regulatory proteins, tetR family CPA52_RS03820 PF02926 THUMP domain CPA52_RS03820 PF02568 Thiamine biosynthesis protein (ThiI) CPA52_RS03825 PF02558 Ketopantoate reductase PanE/ApbA CPA52_RS03825 PF08546 Ketopantoate reductase PanE/ApbA C terminal CPA52_RS03835 PF04461 Protein of unknown function (DUF520) CPA52_RS03840 PF00593 TonB dependent receptor CPA52_RS03840 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS03845 PF01625 Peptide methionine sulfoxide reductase CPA52_RS03850 PF00873 AcrB/AcrD/AcrF family CPA52_RS03855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPA52_RS03880 PF01471 Putative peptidoglycan binding domain CPA52_RS03880 PF13401 AAA domain CPA52_RS03890 PF11871 Domain of unknown function (DUF3391) CPA52_RS03890 PF01966 HD domain CPA52_RS03895 PF01619 Proline dehydrogenase CPA52_RS03895 PF00171 Aldehyde dehydrogenase family CPA52_RS03895 PF14850 DNA-binding domain of Proline dehydrogenase CPA52_RS03895 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CPA52_RS03900 PF01037 Lrp/AsnC ligand binding domain CPA52_RS03905 PF03448 MgtE intracellular N domain CPA52_RS03905 PF00571 CBS domain CPA52_RS03905 PF01769 Divalent cation transporter CPA52_RS03915 PF01476 LysM domain CPA52_RS03915 PF00877 NlpC/P60 family CPA52_RS03915 PF08239 Bacterial SH3 domain CPA52_RS03920 PF01928 CYTH domain CPA52_RS03935 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS03935 PF00072 Response regulator receiver domain CPA52_RS03940 PF00543 Nitrogen regulatory protein P-II CPA52_RS03945 PF00909 Ammonium Transporter Family CPA52_RS03950 PF14814 Bifunctional transglycosylase second domain CPA52_RS03950 PF00905 Penicillin binding protein transpeptidase domain CPA52_RS03950 PF00912 Transglycosylase CPA52_RS03955 PF00672 HAMP domain CPA52_RS03955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS03955 PF12729 Four helix bundle sensory module for signal transduction CPA52_RS03960 PF00202 Aminotransferase class-III CPA52_RS03965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPA52_RS03965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPA52_RS03970 PF03653 Uncharacterised protein family (UPF0093) CPA52_RS03975 PF00654 Voltage gated chloride channel CPA52_RS03980 PF01521 Iron-sulphur cluster biosynthesis CPA52_RS03995 PF07690 Major Facilitator Superfamily CPA52_RS04000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPA52_RS04010 PF05175 Methyltransferase small domain CPA52_RS04020 PF01722 BolA-like protein CPA52_RS04025 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CPA52_RS04025 PF07055 Enoyl reductase FAD binding domain CPA52_RS04025 PF12241 Trans-2-enoyl-CoA reductase catalytic region CPA52_RS04030 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CPA52_RS04030 PF11973 NQRA C-terminal domain CPA52_RS04035 PF03116 NQR2, RnfD, RnfE family CPA52_RS04040 PF04205 FMN-binding domain CPA52_RS04045 PF02508 Rnf-Nqr subunit, membrane protein CPA52_RS04050 PF02508 Rnf-Nqr subunit, membrane protein CPA52_RS04055 PF00111 2Fe-2S iron-sulfur cluster binding domain CPA52_RS04055 PF00175 Oxidoreductase NAD-binding domain CPA52_RS04055 PF00970 Oxidoreductase FAD-binding domain CPA52_RS04060 PF02424 ApbE family CPA52_RS04065 PF04400 (Na+)-NQR maturation NqrM CPA52_RS04080 PF00392 Bacterial regulatory proteins, gntR family CPA52_RS04080 PF00155 Aminotransferase class I and II CPA52_RS04095 PF00850 Histone deacetylase domain CPA52_RS04100 PF07238 PilZ domain CPA52_RS04105 PF00005 ABC transporter CPA52_RS04105 PF12848 ABC transporter CPA52_RS04115 PF04204 Homoserine O-succinyltransferase CPA52_RS04120 PF02574 Homocysteine S-methyltransferase CPA52_RS04120 PF00809 Pterin binding enzyme CPA52_RS04120 PF02965 Vitamin B12 dependent methionine synthase, activation domain CPA52_RS04120 PF02607 B12 binding domain CPA52_RS04120 PF02310 B12 binding domain CPA52_RS04125 PF02574 Homocysteine S-methyltransferase CPA52_RS04125 PF00809 Pterin binding enzyme CPA52_RS04125 PF02965 Vitamin B12 dependent methionine synthase, activation domain CPA52_RS04125 PF02607 B12 binding domain CPA52_RS04125 PF02310 B12 binding domain CPA52_RS04140 PF01177 Asp/Glu/Hydantoin racemase CPA52_RS04145 PF01799 [2Fe-2S] binding domain CPA52_RS04145 PF00111 2Fe-2S iron-sulfur cluster binding domain CPA52_RS04150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CPA52_RS04155 PF05532 CsbD-like CPA52_RS04160 PF08482 ATP-dependent helicase C-terminal CPA52_RS04160 PF00271 Helicase conserved C-terminal domain CPA52_RS04160 PF04408 Helicase associated domain (HA2) CPA52_RS04160 PF00270 DEAD/DEAH box helicase CPA52_RS04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS04180 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS04185 PF00360 Phytochrome region CPA52_RS04185 PF00563 EAL domain CPA52_RS04185 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS04185 PF01590 GAF domain CPA52_RS04210 PF00107 Zinc-binding dehydrogenase CPA52_RS04210 PF08240 Alcohol dehydrogenase GroES-like domain CPA52_RS04215 PF07690 Major Facilitator Superfamily CPA52_RS04230 PF01381 Helix-turn-helix CPA52_RS04260 PF05491 RuvB C-terminal winged helix domain CPA52_RS04260 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPA52_RS04260 PF17864 RuvB AAA lid domain CPA52_RS04265 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS04265 PF13426 PAS domain CPA52_RS04265 PF00563 EAL domain CPA52_RS04275 PF02566 OsmC-like protein CPA52_RS04285 PF00875 DNA photolyase CPA52_RS04285 PF03441 FAD binding domain of DNA photolyase CPA52_RS04290 PF01613 Flavin reductase like domain CPA52_RS04295 PF07859 alpha/beta hydrolase fold CPA52_RS04300 PF00672 HAMP domain CPA52_RS04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS04300 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS04305 PF00072 Response regulator receiver domain CPA52_RS04305 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS04335 PF02798 Glutathione S-transferase, N-terminal domain CPA52_RS04350 PF03466 LysR substrate binding domain CPA52_RS04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS04365 PF00892 EamA-like transporter family CPA52_RS04370 PF01432 Peptidase family M3 CPA52_RS04375 PF12795 Mechanosensitive ion channel porin domain CPA52_RS04375 PF00924 Mechanosensitive ion channel CPA52_RS04375 PF12794 Mechanosensitive ion channel inner membrane domain 1 CPA52_RS04380 PF00593 TonB dependent receptor CPA52_RS04380 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS04390 PF13419 Haloacid dehalogenase-like hydrolase CPA52_RS04395 PF01068 ATP dependent DNA ligase domain CPA52_RS04395 PF14743 DNA ligase OB-like domain CPA52_RS04400 PF00012 Hsp70 protein CPA52_RS04405 PF02142 MGS-like domain CPA52_RS04415 PF05922 Peptidase inhibitor I9 CPA52_RS04415 PF00082 Subtilase family CPA52_RS04420 PF07690 Major Facilitator Superfamily CPA52_RS04435 PF01476 LysM domain CPA52_RS04435 PF08525 Opacity-associated protein A N-terminal motif CPA52_RS04435 PF01551 Peptidase family M23 CPA52_RS04440 PF01557 Fumarylacetoacetate (FAA) hydrolase family CPA52_RS04445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPA52_RS04455 PF00854 POT family CPA52_RS04460 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CPA52_RS04460 PF13176 Tetratricopeptide repeat CPA52_RS04465 PF01270 Glycosyl hydrolases family 8 CPA52_RS04470 PF03170 Bacterial cellulose synthase subunit CPA52_RS04475 PF03552 Cellulose synthase CPA52_RS04475 PF07238 PilZ domain CPA52_RS04475 PF00535 Glycosyl transferase family 2 CPA52_RS04490 PF10995 Cellulose biosynthesis GIL CPA52_RS04495 PF11658 Cellulose biosynthesis protein BcsG CPA52_RS04500 PF18024 Helix-turn-helix domain CPA52_RS04500 PF00158 Sigma-54 interaction domain CPA52_RS04525 PF00005 ABC transporter CPA52_RS04530 PF03379 CcmB protein CPA52_RS04535 PF01578 Cytochrome C assembly protein CPA52_RS04540 PF04995 Heme exporter protein D (CcmD) CPA52_RS04545 PF03100 CcmE CPA52_RS04550 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CPA52_RS04550 PF01578 Cytochrome C assembly protein CPA52_RS04555 PF08534 Redoxin CPA52_RS04560 PF03918 Cytochrome C biogenesis protein CPA52_RS04570 PF04333 MlaA lipoprotein CPA52_RS04575 PF08668 HDOD domain CPA52_RS04575 PF00563 EAL domain CPA52_RS04580 PF00474 Sodium:solute symporter family CPA52_RS04585 PF07130 YebG protein CPA52_RS04600 PF02600 Disulfide bond formation protein DsbB CPA52_RS04605 PF00589 Phage integrase family CPA52_RS04605 PF13495 Phage integrase, N-terminal SAM-like domain CPA52_RS04620 PF02371 Transposase IS116/IS110/IS902 family CPA52_RS04620 PF01548 Transposase CPA52_RS04645 PF00392 Bacterial regulatory proteins, gntR family CPA52_RS04645 PF07840 FadR C-terminal domain CPA52_RS04650 PF10417 C-terminal domain of 1-Cys peroxiredoxin CPA52_RS04650 PF00578 AhpC/TSA family CPA52_RS04655 PF00593 TonB dependent receptor CPA52_RS04655 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS04660 PF01668 SmpB protein CPA52_RS04665 PF03364 Polyketide cyclase / dehydrase and lipid transport CPA52_RS04670 PF03658 RnfH family Ubiquitin CPA52_RS04675 PF04355 SmpA / OmlA family CPA52_RS04680 PF01541 GIY-YIG catalytic domain CPA52_RS04695 PF02743 Cache domain CPA52_RS04695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS04695 PF00672 HAMP domain CPA52_RS04700 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CPA52_RS04700 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CPA52_RS04705 PF03466 LysR substrate binding domain CPA52_RS04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS04710 PF00072 Response regulator receiver domain CPA52_RS04710 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS04725 PF00072 Response regulator receiver domain CPA52_RS04725 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS04730 PF00672 HAMP domain CPA52_RS04730 PF16750 Sensor domain of 2-component histidine kinase CPA52_RS04730 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS04730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS04745 PF07070 SpoOM protein CPA52_RS04750 PF13673 Acetyltransferase (GNAT) domain CPA52_RS04755 PF00209 Sodium:neurotransmitter symporter family CPA52_RS04760 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS04760 PF00672 HAMP domain CPA52_RS04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS04765 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS04765 PF00072 Response regulator receiver domain CPA52_RS04795 PF01985 CRS1 / YhbY (CRM) domain CPA52_RS04800 PF01728 FtsJ-like methyltransferase CPA52_RS04805 PF00004 ATPase family associated with various cellular activities (AAA) CPA52_RS04805 PF17862 AAA+ lid domain CPA52_RS04805 PF06480 FtsH Extracellular CPA52_RS04805 PF01434 Peptidase family M41 CPA52_RS04810 PF00809 Pterin binding enzyme CPA52_RS04815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPA52_RS04815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPA52_RS04815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPA52_RS04815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPA52_RS04820 PF00121 Triosephosphate isomerase CPA52_RS04825 PF03840 Preprotein translocase SecG subunit CPA52_RS04835 PF02743 Cache domain CPA52_RS04835 PF00672 HAMP domain CPA52_RS04835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS04850 PF00593 TonB dependent receptor CPA52_RS04850 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS04855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPA52_RS04855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPA52_RS04855 PF11890 Domain of unknown function (DUF3410) CPA52_RS04860 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPA52_RS04860 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPA52_RS04870 PF01416 tRNA pseudouridine synthase CPA52_RS04875 PF17848 Acetyl-coA carboxylase zinc finger domain CPA52_RS04875 PF01039 Carboxyl transferase domain CPA52_RS04880 PF08245 Mur ligase middle domain CPA52_RS04880 PF02875 Mur ligase family, glutamate ligase domain CPA52_RS04890 PF02674 Colicin V production protein CPA52_RS04895 PF00156 Phosphoribosyl transferase domain CPA52_RS04905 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CPA52_RS04910 PF00360 Phytochrome region CPA52_RS04910 PF01590 GAF domain CPA52_RS04910 PF00563 EAL domain CPA52_RS04910 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS04915 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS04915 PF00989 PAS fold CPA52_RS04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS04920 PF12850 Calcineurin-like phosphoesterase superfamily domain CPA52_RS04925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPA52_RS04930 PF01406 tRNA synthetases class I (C) catalytic domain CPA52_RS04930 PF09190 DALR domain CPA52_RS04935 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CPA52_RS04935 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CPA52_RS04965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPA52_RS04965 PF05697 Bacterial trigger factor protein (TF) CPA52_RS04965 PF05698 Bacterial trigger factor protein (TF) C-terminus CPA52_RS04970 PF00574 Clp protease CPA52_RS04975 PF10431 C-terminal, D2-small domain, of ClpB protein CPA52_RS04975 PF07724 AAA domain (Cdc48 subfamily) CPA52_RS04975 PF06689 ClpX C4-type zinc finger CPA52_RS04980 PF00004 ATPase family associated with various cellular activities (AAA) CPA52_RS04980 PF05362 Lon protease (S16) C-terminal proteolytic domain CPA52_RS04980 PF02190 ATP-dependent protease La (LON) substrate-binding domain CPA52_RS04985 PF00216 Bacterial DNA-binding protein CPA52_RS04990 PF13145 PPIC-type PPIASE domain CPA52_RS04995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPA52_RS05000 PF00005 ABC transporter CPA52_RS05005 PF00005 ABC transporter CPA52_RS05005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CPA52_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component CPA52_RS05010 PF12911 N-terminal TM domain of oligopeptide transport permease C CPA52_RS05015 PF00528 Binding-protein-dependent transport system inner membrane component CPA52_RS05020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPA52_RS05025 PF00158 Sigma-54 interaction domain CPA52_RS05025 PF02954 Bacterial regulatory protein, Fis family CPA52_RS05030 PF04012 PspA/IM30 family CPA52_RS05035 PF06667 Phage shock protein B CPA52_RS05040 PF04024 PspC domain CPA52_RS05045 PF04317 YcjX-like family, DUF463 CPA52_RS05050 PF05128 Domain of unknown function (DUF697) CPA52_RS05055 PF01053 Cys/Met metabolism PLP-dependent enzyme CPA52_RS05060 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CPA52_RS05065 PF01329 Pterin 4 alpha carbinolamine dehydratase CPA52_RS05075 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CPA52_RS05075 PF14602 Hexapeptide repeat of succinyl-transferase CPA52_RS05075 PF00132 Bacterial transferase hexapeptide (six repeats) CPA52_RS05080 PF01909 Nucleotidyltransferase domain CPA52_RS05080 PF08335 GlnD PII-uridylyltransferase CPA52_RS05080 PF01966 HD domain CPA52_RS05085 PF00557 Metallopeptidase family M24 CPA52_RS05090 PF00318 Ribosomal protein S2 CPA52_RS05095 PF00889 Elongation factor TS CPA52_RS05100 PF00696 Amino acid kinase family CPA52_RS05105 PF01765 Ribosome recycling factor CPA52_RS05110 PF01255 Putative undecaprenyl diphosphate synthase CPA52_RS05120 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CPA52_RS05120 PF13288 DXP reductoisomerase C-terminal domain CPA52_RS05120 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPA52_RS05125 PF02163 Peptidase family M50 CPA52_RS05125 PF17820 PDZ domain CPA52_RS05130 PF01103 Surface antigen CPA52_RS05130 PF07244 Surface antigen variable number repeat CPA52_RS05135 PF03938 Outer membrane protein (OmpH-like) CPA52_RS05140 PF00132 Bacterial transferase hexapeptide (six repeats) CPA52_RS05140 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CPA52_RS05145 PF07977 FabA-like domain CPA52_RS05150 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CPA52_RS05150 PF00132 Bacterial transferase hexapeptide (six repeats) CPA52_RS05155 PF03330 Lytic transglycolase CPA52_RS05160 PF00005 ABC transporter CPA52_RS05160 PF00664 ABC transporter transmembrane region CPA52_RS05165 PF00664 ABC transporter transmembrane region CPA52_RS05165 PF00005 ABC transporter CPA52_RS05170 PF08173 Membrane bound YbgT-like protein CPA52_RS05175 PF02322 Cytochrome bd terminal oxidase subunit II CPA52_RS05180 PF01654 Cytochrome bd terminal oxidase subunit I CPA52_RS05185 PF02684 Lipid-A-disaccharide synthetase CPA52_RS05190 PF01351 Ribonuclease HII CPA52_RS05195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPA52_RS05195 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPA52_RS05195 PF01336 OB-fold nucleic acid binding domain CPA52_RS05195 PF02811 PHP domain CPA52_RS05195 PF14579 Helix-hairpin-helix motif CPA52_RS05200 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPA52_RS05205 PF11734 TilS substrate C-terminal domain CPA52_RS05205 PF01171 PP-loop family CPA52_RS05205 PF09179 TilS substrate binding domain CPA52_RS05215 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS05215 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS05215 PF00563 EAL domain CPA52_RS05220 PF02254 TrkA-N domain CPA52_RS05220 PF02080 TrkA-C domain CPA52_RS05220 PF00999 Sodium/hydrogen exchanger family CPA52_RS05240 PF09308 LuxQ, periplasmic CPA52_RS05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS05240 PF00072 Response regulator receiver domain CPA52_RS05240 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS05250 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPA52_RS05250 PF07683 Cobalamin synthesis protein cobW C-terminal domain CPA52_RS05255 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS05255 PF00593 TonB dependent receptor CPA52_RS05260 PF00924 Mechanosensitive ion channel CPA52_RS05260 PF05552 Conserved TM helix CPA52_RS05270 PF04143 Sulphur transport CPA52_RS05280 PF00083 Sugar (and other) transporter CPA52_RS05300 PF04820 Tryptophan halogenase CPA52_RS05325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPA52_RS05325 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPA52_RS05325 PF02811 PHP domain CPA52_RS05325 PF00929 Exonuclease CPA52_RS05325 PF14579 Helix-hairpin-helix motif CPA52_RS05325 PF11490 DNA polymerase III polC-type N-terminus II CPA52_RS05340 PF00082 Subtilase family CPA52_RS05345 PF08281 Sigma-70, region 4 CPA52_RS05345 PF04542 Sigma-70 region 2 CPA52_RS05370 PF10689 Protein of unknown function (DUF2496) CPA52_RS05380 PF00850 Histone deacetylase domain CPA52_RS05390 PF01925 Sulfite exporter TauE/SafE CPA52_RS05395 PF13307 Helicase C-terminal domain CPA52_RS05395 PF06733 DEAD_2 CPA52_RS05400 PF00136 DNA polymerase family B CPA52_RS05400 PF03104 DNA polymerase family B, exonuclease domain CPA52_RS05405 PF00593 TonB dependent receptor CPA52_RS05405 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS05420 PF00271 Helicase conserved C-terminal domain CPA52_RS05420 PF04851 Type III restriction enzyme, res subunit CPA52_RS05430 PF01103 Surface antigen CPA52_RS05430 PF07244 Surface antigen variable number repeat CPA52_RS05430 PF17243 POTRA domain TamA domain 1 CPA52_RS05435 PF04357 TamB, inner membrane protein subunit of TAM complex CPA52_RS05445 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CPA52_RS05445 PF14489 QueF-like protein CPA52_RS05450 PF07348 Syd protein (SUKH-2) CPA52_RS05455 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) CPA52_RS05485 PF04287 tRNA pseudouridine synthase C CPA52_RS05490 PF00849 RNA pseudouridylate synthase CPA52_RS05495 PF00258 Flavodoxin CPA52_RS05500 PF01476 LysM domain CPA52_RS05500 PF01464 Transglycosylase SLT domain CPA52_RS05505 PF00753 Metallo-beta-lactamase superfamily CPA52_RS05505 PF16123 Hydroxyacylglutathione hydrolase C-terminus CPA52_RS05510 PF08241 Methyltransferase domain CPA52_RS05515 PF00075 RNase H CPA52_RS05520 PF00929 Exonuclease CPA52_RS05570 PF00005 ABC transporter CPA52_RS05580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPA52_RS05580 PF02770 Acyl-CoA dehydrogenase, middle domain CPA52_RS05580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPA52_RS05580 PF09317 Domain of unknown function (DUF1974) CPA52_RS05585 PF13230 Glutamine amidotransferases class-II CPA52_RS05595 PF00551 Formyl transferase CPA52_RS05600 PF00586 AIR synthase related protein, N-terminal domain CPA52_RS05600 PF02769 AIR synthase related protein, C-terminal domain CPA52_RS05605 PF08003 Protein of unknown function (DUF1698) CPA52_RS05610 PF13847 Methyltransferase domain CPA52_RS05620 PF01863 Protein of unknown function DUF45 CPA52_RS05625 PF01904 Protein of unknown function DUF72 CPA52_RS05630 PF01336 OB-fold nucleic acid binding domain CPA52_RS05630 PF00152 tRNA synthetases class II (D, K and N) CPA52_RS05630 PF02938 GAD domain CPA52_RS05660 PF00270 DEAD/DEAH box helicase CPA52_RS05660 PF00271 Helicase conserved C-terminal domain CPA52_RS05680 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CPA52_RS05680 PF00293 NUDIX domain CPA52_RS05680 PF09297 NADH pyrophosphatase zinc ribbon domain CPA52_RS05685 PF01053 Cys/Met metabolism PLP-dependent enzyme CPA52_RS05695 PF00005 ABC transporter CPA52_RS05700 PF08000 Bacterial PH domain CPA52_RS05710 PF02770 Acyl-CoA dehydrogenase, middle domain CPA52_RS05710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPA52_RS05710 PF09317 Domain of unknown function (DUF1974) CPA52_RS05710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPA52_RS05720 PF00291 Pyridoxal-phosphate dependent enzyme CPA52_RS05725 PF00375 Sodium:dicarboxylate symporter family CPA52_RS05730 PF00072 Response regulator receiver domain CPA52_RS05730 PF00196 Bacterial regulatory proteins, luxR family CPA52_RS05735 PF01541 GIY-YIG catalytic domain CPA52_RS05735 PF02151 UvrB/uvrC motif CPA52_RS05735 PF08459 UvrC Helix-hairpin-helix N-terminal CPA52_RS05740 PF01066 CDP-alcohol phosphatidyltransferase CPA52_RS05790 PF01235 Sodium:alanine symporter family CPA52_RS05815 PF00308 Bacterial dnaA protein CPA52_RS05820 PF01409 tRNA synthetases class II core domain (F) CPA52_RS05820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPA52_RS05825 PF03147 Ferredoxin-fold anticodon binding domain CPA52_RS05825 PF03484 tRNA synthetase B5 domain CPA52_RS05825 PF01588 Putative tRNA binding domain CPA52_RS05825 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CPA52_RS05825 PF03483 B3/4 domain CPA52_RS05830 PF00216 Bacterial DNA-binding protein CPA52_RS05840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPA52_RS05840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPA52_RS05845 PF18027 Cytosolic carboxypeptidase N-terminal domain CPA52_RS05845 PF00246 Zinc carboxypeptidase CPA52_RS05850 PF01235 Sodium:alanine symporter family CPA52_RS05860 PF07023 Protein of unknown function (DUF1315) CPA52_RS05875 PF03109 ABC1 family CPA52_RS05880 PF01590 GAF domain CPA52_RS05880 PF02954 Bacterial regulatory protein, Fis family CPA52_RS05880 PF00158 Sigma-54 interaction domain CPA52_RS05885 PF13746 4Fe-4S dicluster domain CPA52_RS05885 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CPA52_RS05885 PF12801 4Fe-4S binding domain CPA52_RS05900 PF01979 Amidohydrolase family CPA52_RS05905 PF03606 C4-dicarboxylate anaerobic carrier CPA52_RS05910 PF00593 TonB dependent receptor CPA52_RS05910 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS05935 PF13472 GDSL-like Lipase/Acylhydrolase family CPA52_RS05940 PF00005 ABC transporter CPA52_RS05950 PF02075 Crossover junction endodeoxyribonuclease RuvC CPA52_RS05955 PF07499 RuvA, C-terminal domain CPA52_RS05955 PF01330 RuvA N terminal domain CPA52_RS05960 PF05491 RuvB C-terminal winged helix domain CPA52_RS05960 PF17864 RuvB AAA lid domain CPA52_RS05960 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPA52_RS05965 PF01618 MotA/TolQ/ExbB proton channel family CPA52_RS05970 PF02472 Biopolymer transport protein ExbD/TolR CPA52_RS05980 PF07676 WD40-like Beta Propeller Repeat CPA52_RS05980 PF04052 TolB amino-terminal domain CPA52_RS05985 PF00691 OmpA family CPA52_RS05990 PF16331 TolA binding protein trimerisation CPA52_RS05990 PF13525 Outer membrane lipoprotein CPA52_RS06035 PF02445 Quinolinate synthetase A protein CPA52_RS06045 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS06045 PF17152 Periplasmic sensor domain CPA52_RS06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS06050 PF00072 Response regulator receiver domain CPA52_RS06050 PF09308 LuxQ, periplasmic CPA52_RS06050 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS06055 PF12697 Alpha/beta hydrolase family CPA52_RS06065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPA52_RS06070 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS06070 PF00593 TonB dependent receptor CPA52_RS06085 PF17946 RecC C-terminal domain CPA52_RS06095 PF13538 UvrD-like helicase C-terminal domain CPA52_RS06105 PF08447 PAS fold CPA52_RS06105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS06105 PF13426 PAS domain CPA52_RS06120 PF01171 PP-loop family CPA52_RS06125 PF00582 Universal stress protein family CPA52_RS06130 PF13545 Crp-like helix-turn-helix domain CPA52_RS06130 PF00027 Cyclic nucleotide-binding domain CPA52_RS06145 PF00403 Heavy-metal-associated domain CPA52_RS06155 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CPA52_RS06155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CPA52_RS06170 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPA52_RS06180 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS06180 PF00593 TonB dependent receptor CPA52_RS06200 PF00270 DEAD/DEAH box helicase CPA52_RS06200 PF00271 Helicase conserved C-terminal domain CPA52_RS06200 PF02559 CarD-like/TRCF domain CPA52_RS06200 PF03461 TRCF domain CPA52_RS06200 PF17757 UvrB interaction domain CPA52_RS06205 PF00795 Carbon-nitrogen hydrolase CPA52_RS06210 PF04371 Porphyromonas-type peptidyl-arginine deiminase CPA52_RS06225 PF00578 AhpC/TSA family CPA52_RS06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS06230 PF03466 LysR substrate binding domain CPA52_RS06250 PF00593 TonB dependent receptor CPA52_RS06250 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS06255 PF02472 Biopolymer transport protein ExbD/TolR CPA52_RS06265 PF03466 LysR substrate binding domain CPA52_RS06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS06270 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CPA52_RS06280 PF00884 Sulfatase CPA52_RS06280 PF11893 Domain of unknown function (DUF3413) CPA52_RS06285 PF07208 Protein of unknown function (DUF1414) CPA52_RS06290 PF04245 37-kD nucleoid-associated bacterial protein CPA52_RS06295 PF12111 Polyribonucleotide phosphorylase C terminal CPA52_RS06295 PF00575 S1 RNA binding domain CPA52_RS06295 PF10150 Ribonuclease E/G family CPA52_RS06300 PF00849 RNA pseudouridylate synthase CPA52_RS06300 PF01479 S4 domain CPA52_RS06305 PF13419 Haloacid dehalogenase-like hydrolase CPA52_RS06310 PF02545 Maf-like protein CPA52_RS06315 PF02620 Large ribosomal RNA subunit accumulation protein YceD CPA52_RS06320 PF01783 Ribosomal L32p protein family CPA52_RS06325 PF02504 Fatty acid synthesis protein CPA52_RS06330 PF00698 Acyl transferase domain CPA52_RS06340 PF00550 Phosphopantetheine attachment site CPA52_RS06345 PF00109 Beta-ketoacyl synthase, N-terminal domain CPA52_RS06345 PF02801 Beta-ketoacyl synthase, C-terminal domain CPA52_RS06350 PF01063 Amino-transferase class IV CPA52_RS06355 PF02618 YceG-like family CPA52_RS06360 PF02223 Thymidylate kinase CPA52_RS06365 PF09115 DNA polymerase III, delta subunit, C terminal CPA52_RS06375 PF01026 TatD related DNase CPA52_RS06390 PF01641 SelR domain CPA52_RS06390 PF01625 Peptide methionine sulfoxide reductase CPA52_RS06415 PF03600 Citrate transporter CPA52_RS06420 PF01842 ACT domain CPA52_RS06420 PF00696 Amino acid kinase family CPA52_RS06430 PF00209 Sodium:neurotransmitter symporter family CPA52_RS06440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPA52_RS06440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPA52_RS06445 PF00255 Glutathione peroxidase CPA52_RS06450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPA52_RS06450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPA52_RS06460 PF00929 Exonuclease CPA52_RS06460 PF08411 Exonuclease C-terminal CPA52_RS06465 PF14659 Phage integrase, N-terminal SAM-like domain CPA52_RS06465 PF00589 Phage integrase family CPA52_RS06465 PF13356 Arm DNA-binding domain CPA52_RS06505 PF00717 Peptidase S24-like CPA52_RS06535 PF05840 Bacteriophage replication gene A protein (GPA) CPA52_RS06545 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CPA52_RS06705 PF12697 Alpha/beta hydrolase family CPA52_RS06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS06735 PF03466 LysR substrate binding domain CPA52_RS06740 PF00356 Bacterial regulatory proteins, lacI family CPA52_RS06750 PF00232 Glycosyl hydrolase family 1 CPA52_RS06755 PF00933 Glycosyl hydrolase family 3 N terminal domain CPA52_RS06755 PF14310 Fibronectin type III-like domain CPA52_RS06755 PF01915 Glycosyl hydrolase family 3 C-terminal domain CPA52_RS06760 PF04820 Tryptophan halogenase CPA52_RS06765 PF04820 Tryptophan halogenase CPA52_RS06790 PF00106 short chain dehydrogenase CPA52_RS06795 PF09997 Predicted membrane protein (DUF2238) CPA52_RS06815 PF02371 Transposase IS116/IS110/IS902 family CPA52_RS06815 PF01548 Transposase CPA52_RS06825 PF07517 SecA DEAD-like domain CPA52_RS06825 PF01043 SecA preprotein cross-linking domain CPA52_RS06825 PF02810 SEC-C motif CPA52_RS06825 PF07516 SecA Wing and Scaffold domain CPA52_RS06840 PF07995 Glucose / Sorbosone dehydrogenase CPA52_RS06845 PF00970 Oxidoreductase FAD-binding domain CPA52_RS06845 PF00111 2Fe-2S iron-sulfur cluster binding domain CPA52_RS06845 PF00175 Oxidoreductase NAD-binding domain CPA52_RS06850 PF00487 Fatty acid desaturase CPA52_RS06855 PF01063 Amino-transferase class IV CPA52_RS06865 PF00326 Prolyl oligopeptidase family CPA52_RS06865 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CPA52_RS06870 PF01966 HD domain CPA52_RS06870 PF13286 Phosphohydrolase-associated domain CPA52_RS06885 PF00356 Bacterial regulatory proteins, lacI family CPA52_RS06895 PF00232 Glycosyl hydrolase family 1 CPA52_RS06900 PF07690 Major Facilitator Superfamily CPA52_RS06905 PF01915 Glycosyl hydrolase family 3 C-terminal domain CPA52_RS06905 PF14310 Fibronectin type III-like domain CPA52_RS06905 PF00933 Glycosyl hydrolase family 3 N terminal domain CPA52_RS06915 PF07694 5TMR of 5TMR-LYT CPA52_RS06915 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS06920 PF08338 Domain of unknown function (DUF1731) CPA52_RS06920 PF01370 NAD dependent epimerase/dehydratase family CPA52_RS06925 PF01594 AI-2E family transporter CPA52_RS06940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS06945 PF00072 Response regulator receiver domain CPA52_RS06945 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS06955 PF03795 YCII-related domain CPA52_RS06960 PF00209 Sodium:neurotransmitter symporter family CPA52_RS06970 PF04279 Intracellular septation protein A CPA52_RS06975 PF00216 Bacterial DNA-binding protein CPA52_RS06980 PF01965 DJ-1/PfpI family CPA52_RS06985 PF00290 Tryptophan synthase alpha chain CPA52_RS06990 PF00291 Pyridoxal-phosphate dependent enzyme CPA52_RS06995 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CPA52_RS06995 PF00218 Indole-3-glycerol phosphate synthase CPA52_RS07000 PF02885 Glycosyl transferase family, helical bundle domain CPA52_RS07000 PF00591 Glycosyl transferase family, a/b domain CPA52_RS07005 PF00117 Glutamine amidotransferase class-I CPA52_RS07010 PF04715 Anthranilate synthase component I, N terminal region CPA52_RS07010 PF00425 chorismate binding enzyme CPA52_RS07015 PF02811 PHP domain CPA52_RS07020 PF01300 Telomere recombination CPA52_RS07025 PF02616 Segregation and condensation protein ScpA CPA52_RS07030 PF01292 Prokaryotic cytochrome b561 CPA52_RS07035 PF04264 YceI-like domain CPA52_RS07055 PF00180 Isocitrate/isopropylmalate dehydrogenase CPA52_RS07065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS07065 PF03466 LysR substrate binding domain CPA52_RS07070 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CPA52_RS07085 PF02469 Fasciclin domain CPA52_RS07090 PF10502 Signal peptidase, peptidase S26 CPA52_RS07095 PF01081 KDPG and KHG aldolase CPA52_RS07100 PF08264 Anticodon-binding domain of tRNA CPA52_RS07100 PF09334 tRNA synthetases class I (M) CPA52_RS07100 PF01588 Putative tRNA binding domain CPA52_RS07105 PF10609 NUBPL iron-transfer P-loop NTPase CPA52_RS07110 PF00692 dUTPase CPA52_RS07130 PF00155 Aminotransferase class I and II CPA52_RS07140 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CPA52_RS07140 PF13036 Peptidoglycan-synthase activator LpoB CPA52_RS07155 PF00892 EamA-like transporter family CPA52_RS07160 PF02557 D-alanyl-D-alanine carboxypeptidase CPA52_RS07165 PF01546 Peptidase family M20/M25/M40 CPA52_RS07165 PF07687 Peptidase dimerisation domain CPA52_RS07170 PF03960 ArsC family CPA52_RS07175 PF02378 Phosphotransferase system, EIIC CPA52_RS07175 PF00367 phosphotransferase system, EIIB CPA52_RS07175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CPA52_RS07185 PF01515 Phosphate acetyl/butaryl transferase CPA52_RS07185 PF07085 DRTGG domain CPA52_RS07190 PF00871 Acetokinase family CPA52_RS07195 PF04217 Protein of unknown function, DUF412 CPA52_RS07200 PF13847 Methyltransferase domain CPA52_RS07210 PF03372 Endonuclease/Exonuclease/phosphatase family CPA52_RS07225 PF04079 Segregation and condensation complex subunit ScpB CPA52_RS07230 PF01479 S4 domain CPA52_RS07230 PF00849 RNA pseudouridylate synthase CPA52_RS07235 PF00106 short chain dehydrogenase CPA52_RS07240 PF12262 Bacterial virulence factor lipase N-terminal CPA52_RS07245 PF08496 Peptidase family S49 N-terminal CPA52_RS07245 PF01343 Peptidase family S49 CPA52_RS07250 PF00375 Sodium:dicarboxylate symporter family CPA52_RS07260 PF08272 Topoisomerase I zinc-ribbon-like CPA52_RS07260 PF01396 Topoisomerase DNA binding C4 zinc finger CPA52_RS07260 PF01751 Toprim domain CPA52_RS07260 PF01131 DNA topoisomerase CPA52_RS07270 PF03350 Uncharacterized protein family, UPF0114 CPA52_RS07275 PF00128 Alpha amylase, catalytic domain CPA52_RS07285 PF04820 Tryptophan halogenase CPA52_RS07290 PF09087 Cyclomaltodextrinase, N-terminal CPA52_RS07290 PF10438 Cyclo-malto-dextrinase C-terminal domain CPA52_RS07290 PF00128 Alpha amylase, catalytic domain CPA52_RS07295 PF00128 Alpha amylase, catalytic domain CPA52_RS07295 PF02903 Alpha amylase, N-terminal ig-like domain CPA52_RS07295 PF16657 Maltogenic Amylase, C-terminal domain CPA52_RS07305 PF09137 Glucodextranase, domain N CPA52_RS07305 PF00723 Glycosyl hydrolases family 15 CPA52_RS07310 PF00326 Prolyl oligopeptidase family CPA52_RS07315 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS07315 PF00593 TonB dependent receptor CPA52_RS07320 PF00356 Bacterial regulatory proteins, lacI family CPA52_RS07325 PF02685 Glucokinase CPA52_RS07330 PF00356 Bacterial regulatory proteins, lacI family CPA52_RS07335 PF00920 Dehydratase family CPA52_RS07340 PF01081 KDPG and KHG aldolase CPA52_RS07345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPA52_RS07345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPA52_RS07355 PF01709 Transcriptional regulator CPA52_RS07360 PF05649 Peptidase family M13 CPA52_RS07360 PF01431 Peptidase family M13 CPA52_RS07365 PF00664 ABC transporter transmembrane region CPA52_RS07365 PF00005 ABC transporter CPA52_RS07375 PF02355 Protein export membrane protein CPA52_RS07375 PF13721 SecD export protein N-terminal TM region CPA52_RS07375 PF07549 SecD/SecF GG Motif CPA52_RS07380 PF07549 SecD/SecF GG Motif CPA52_RS07380 PF02355 Protein export membrane protein CPA52_RS07395 PF08274 PhnA Zinc-Ribbon CPA52_RS07395 PF03831 PhnA domain CPA52_RS07400 PF18030 RimK PreATP-grasp domain CPA52_RS07400 PF08443 RimK-like ATP-grasp domain CPA52_RS07405 PF00814 Glycoprotease family CPA52_RS07405 PF00583 Acetyltransferase (GNAT) family CPA52_RS07410 PF02308 MgtC family CPA52_RS07415 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS07415 PF00072 Response regulator receiver domain CPA52_RS07420 PF12833 Helix-turn-helix domain CPA52_RS07425 PF00109 Beta-ketoacyl synthase, N-terminal domain CPA52_RS07425 PF02801 Beta-ketoacyl synthase, C-terminal domain CPA52_RS07435 PF02308 MgtC family CPA52_RS07445 PF00756 Putative esterase CPA52_RS07450 PF00107 Zinc-binding dehydrogenase CPA52_RS07450 PF08240 Alcohol dehydrogenase GroES-like domain CPA52_RS07455 PF03466 LysR substrate binding domain CPA52_RS07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS07460 PF12704 MacB-like periplasmic core domain CPA52_RS07460 PF02687 FtsX-like permease family CPA52_RS07465 PF00005 ABC transporter CPA52_RS07470 PF02687 FtsX-like permease family CPA52_RS07470 PF12704 MacB-like periplasmic core domain CPA52_RS07480 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS07485 PF00501 AMP-binding enzyme CPA52_RS07485 PF13193 AMP-binding enzyme C-terminal domain CPA52_RS07495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPA52_RS07495 PF02824 TGS domain CPA52_RS07495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPA52_RS07495 PF03129 Anticodon binding domain CPA52_RS07500 PF00707 Translation initiation factor IF-3, C-terminal domain CPA52_RS07500 PF05198 Translation initiation factor IF-3, N-terminal domain CPA52_RS07505 PF01632 Ribosomal protein L35 CPA52_RS07510 PF00453 Ribosomal protein L20 CPA52_RS07520 PF00753 Metallo-beta-lactamase superfamily CPA52_RS07525 PF01037 Lrp/AsnC ligand binding domain CPA52_RS07525 PF13404 AsnC-type helix-turn-helix domain CPA52_RS07530 PF00916 Sulfate permease family CPA52_RS07530 PF01740 STAS domain CPA52_RS07535 PF00672 HAMP domain CPA52_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS07535 PF06580 Histidine kinase CPA52_RS07535 PF02743 Cache domain CPA52_RS07540 PF04397 LytTr DNA-binding domain CPA52_RS07540 PF00072 Response regulator receiver domain CPA52_RS07545 PF00224 Pyruvate kinase, barrel domain CPA52_RS07545 PF02887 Pyruvate kinase, alpha/beta domain CPA52_RS07550 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CPA52_RS07550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPA52_RS07555 PF00710 Asparaginase, N-terminal CPA52_RS07555 PF17763 Glutaminase/Asparaginase C-terminal domain CPA52_RS07560 PF01343 Peptidase family S49 CPA52_RS07565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPA52_RS07565 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS07575 PF00881 Nitroreductase family CPA52_RS07595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPA52_RS07595 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CPA52_RS07600 PF00593 TonB dependent receptor CPA52_RS07600 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS07615 PF06940 Domain of unknown function (DUF1287) CPA52_RS07620 PF00111 2Fe-2S iron-sulfur cluster binding domain CPA52_RS07620 PF00970 Oxidoreductase FAD-binding domain CPA52_RS07625 PF00268 Ribonucleotide reductase, small chain CPA52_RS07630 PF00317 Ribonucleotide reductase, all-alpha domain CPA52_RS07630 PF02867 Ribonucleotide reductase, barrel domain CPA52_RS07630 PF03477 ATP cone domain CPA52_RS07635 PF13419 Haloacid dehalogenase-like hydrolase CPA52_RS07645 PF00521 DNA gyrase/topoisomerase IV, subunit A CPA52_RS07645 PF03989 DNA gyrase C-terminal domain, beta-propeller CPA52_RS07650 PF00266 Aminotransferase class-V CPA52_RS07655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPA52_RS07660 PF02224 Cytidylate kinase CPA52_RS07665 PF00575 S1 RNA binding domain CPA52_RS07670 PF00216 Bacterial DNA-binding protein CPA52_RS07680 PF18073 Rubredoxin metal binding domain CPA52_RS07685 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPA52_RS07695 PF17783 CvfB-like winged helix domain CPA52_RS07695 PF13509 S1 domain CPA52_RS07700 PF00271 Helicase conserved C-terminal domain CPA52_RS07700 PF00270 DEAD/DEAH box helicase CPA52_RS07705 PF00581 Rhodanese-like domain CPA52_RS07705 PF17773 UPF0176 acylphosphatase like domain CPA52_RS07710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPA52_RS07715 PF00873 AcrB/AcrD/AcrF family CPA52_RS07720 PF00571 CBS domain CPA52_RS07720 PF01380 SIS domain CPA52_RS07730 PF02028 BCCT, betaine/carnitine/choline family transporter CPA52_RS07735 PF13537 Glutamine amidotransferase domain CPA52_RS07735 PF00733 Asparagine synthase CPA52_RS07740 PF02626 Carboxyltransferase domain, subdomain A and B CPA52_RS07745 PF02682 Carboxyltransferase domain, subdomain C and D CPA52_RS07750 PF08534 Redoxin CPA52_RS07750 PF01625 Peptide methionine sulfoxide reductase CPA52_RS07750 PF01641 SelR domain CPA52_RS07755 PF03466 LysR substrate binding domain CPA52_RS07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS07760 PF01144 Coenzyme A transferase CPA52_RS07765 PF01144 Coenzyme A transferase CPA52_RS07770 PF00682 HMGL-like CPA52_RS07775 PF00289 Biotin carboxylase, N-terminal domain CPA52_RS07775 PF00364 Biotin-requiring enzyme CPA52_RS07775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPA52_RS07775 PF18140 Propionyl-coenzyme A carboxylase BT domain CPA52_RS07775 PF02785 Biotin carboxylase C-terminal domain CPA52_RS07785 PF01039 Carboxyl transferase domain CPA52_RS07790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPA52_RS07790 PF02770 Acyl-CoA dehydrogenase, middle domain CPA52_RS07790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPA52_RS07795 PF00376 MerR family regulatory protein CPA52_RS07795 PF09278 MerR, DNA binding CPA52_RS07800 PF02803 Thiolase, C-terminal domain CPA52_RS07800 PF00108 Thiolase, N-terminal domain CPA52_RS07805 PF00171 Aldehyde dehydrogenase family CPA52_RS07810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPA52_RS07810 PF02770 Acyl-CoA dehydrogenase, middle domain CPA52_RS07810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPA52_RS07815 PF00378 Enoyl-CoA hydratase/isomerase CPA52_RS07820 PF00378 Enoyl-CoA hydratase/isomerase CPA52_RS07825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPA52_RS07825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPA52_RS07880 PF01292 Prokaryotic cytochrome b561 CPA52_RS07895 PF00364 Biotin-requiring enzyme CPA52_RS07895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPA52_RS07900 PF00883 Cytosol aminopeptidase family, catalytic domain CPA52_RS07900 PF02789 Cytosol aminopeptidase family, N-terminal domain CPA52_RS07935 PF09905 DNA-binding protein VF530 CPA52_RS07940 PF08240 Alcohol dehydrogenase GroES-like domain CPA52_RS07940 PF00107 Zinc-binding dehydrogenase CPA52_RS07945 PF00440 Bacterial regulatory proteins, tetR family CPA52_RS07945 PF16925 Tetracyclin repressor-like, C-terminal domain CPA52_RS07950 PF04957 Ribosome modulation factor CPA52_RS07955 PF07977 FabA-like domain CPA52_RS07965 PF01551 Peptidase family M23 CPA52_RS07970 PF03061 Thioesterase superfamily CPA52_RS07975 PF13726 Na+-H+ antiporter family CPA52_RS07975 PF03553 Na+/H+ antiporter family CPA52_RS07980 PF13559 Domain of unknown function (DUF4129) CPA52_RS07980 PF01841 Transglutaminase-like superfamily CPA52_RS07980 PF11992 Domain of unknown function (DUF3488) CPA52_RS07990 PF07726 ATPase family associated with various cellular activities (AAA) CPA52_RS07990 PF17863 AAA lid domain CPA52_RS07995 PF00072 Response regulator receiver domain CPA52_RS08010 PF00528 Binding-protein-dependent transport system inner membrane component CPA52_RS08015 PF00528 Binding-protein-dependent transport system inner membrane component CPA52_RS08020 PF00005 ABC transporter CPA52_RS08020 PF08402 TOBE domain CPA52_RS08290 PF10011 Predicted membrane protein (DUF2254) CPA52_RS08300 PF00390 Malic enzyme, N-terminal domain CPA52_RS08300 PF03949 Malic enzyme, NAD binding domain CPA52_RS08325 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CPA52_RS08325 PF02222 ATP-grasp domain CPA52_RS08330 PF00731 AIR carboxylase CPA52_RS08335 PF12848 ABC transporter CPA52_RS08335 PF00005 ABC transporter CPA52_RS08365 PF01625 Peptide methionine sulfoxide reductase CPA52_RS08380 PF00593 TonB dependent receptor CPA52_RS08380 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS08395 PF00005 ABC transporter CPA52_RS08410 PF05231 MASE1 CPA52_RS08410 PF08447 PAS fold CPA52_RS08410 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS08410 PF08448 PAS fold CPA52_RS08410 PF13426 PAS domain CPA52_RS08410 PF00563 EAL domain CPA52_RS08425 PF02803 Thiolase, C-terminal domain CPA52_RS08425 PF00108 Thiolase, N-terminal domain CPA52_RS08440 PF13302 Acetyltransferase (GNAT) domain CPA52_RS08475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPA52_RS08485 PF01435 Peptidase family M48 CPA52_RS08495 PF08241 Methyltransferase domain CPA52_RS08500 PF00155 Aminotransferase class I and II CPA52_RS08505 PF06968 Biotin and Thiamin Synthesis associated domain CPA52_RS08505 PF04055 Radical SAM superfamily CPA52_RS08510 PF00202 Aminotransferase class-III CPA52_RS08525 PF00528 Binding-protein-dependent transport system inner membrane component CPA52_RS08530 PF00005 ABC transporter CPA52_RS08530 PF08402 TOBE domain CPA52_RS08545 PF01336 OB-fold nucleic acid binding domain CPA52_RS08545 PF00152 tRNA synthetases class II (D, K and N) CPA52_RS08550 PF01012 Electron transfer flavoprotein domain CPA52_RS08550 PF00766 Electron transfer flavoprotein FAD-binding domain CPA52_RS08555 PF01012 Electron transfer flavoprotein domain CPA52_RS08575 PF18389 TrmO C-terminal domain CPA52_RS08575 PF01980 tRNA-methyltransferase O CPA52_RS08580 PF03129 Anticodon binding domain CPA52_RS08580 PF04073 Aminoacyl-tRNA editing domain CPA52_RS08580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPA52_RS08590 PF12679 ABC-2 family transporter protein CPA52_RS08595 PF00005 ABC transporter CPA52_RS08615 PF05656 Protein of unknown function (DUF805) CPA52_RS08620 PF02817 e3 binding domain CPA52_RS08620 PF00364 Biotin-requiring enzyme CPA52_RS08620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPA52_RS08625 PF02779 Transketolase, pyrimidine binding domain CPA52_RS08625 PF02780 Transketolase, C-terminal domain CPA52_RS08630 PF00676 Dehydrogenase E1 component CPA52_RS08630 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal CPA52_RS08635 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CPA52_RS08640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPA52_RS08640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPA52_RS08640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPA52_RS08640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPA52_RS08645 PF17206 SeqA protein N-terminal domain CPA52_RS08645 PF03925 SeqA protein C-terminal domain CPA52_RS08650 PF00561 alpha/beta hydrolase fold CPA52_RS08660 PF01402 Ribbon-helix-helix protein, copG family CPA52_RS08665 PF00258 Flavodoxin CPA52_RS08670 PF01475 Ferric uptake regulator family CPA52_RS08675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CPA52_RS08675 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPA52_RS08685 PF02629 CoA binding domain CPA52_RS08685 PF00549 CoA-ligase CPA52_RS08690 PF08442 ATP-grasp domain CPA52_RS08690 PF00549 CoA-ligase CPA52_RS08695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPA52_RS08695 PF02817 e3 binding domain CPA52_RS08695 PF00364 Biotin-requiring enzyme CPA52_RS08700 PF00676 Dehydrogenase E1 component CPA52_RS08700 PF16870 2-oxoglutarate dehydrogenase C-terminal CPA52_RS08700 PF02779 Transketolase, pyrimidine binding domain CPA52_RS08700 PF16078 2-oxoglutarate dehydrogenase N-terminus CPA52_RS08705 PF13085 2Fe-2S iron-sulfur cluster binding domain CPA52_RS08710 PF02910 Fumarate reductase flavoprotein C-term CPA52_RS08710 PF00890 FAD binding domain CPA52_RS08715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CPA52_RS08720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CPA52_RS08725 PF00285 Citrate synthase, C-terminal domain CPA52_RS08730 PF00266 Aminotransferase class-V CPA52_RS08735 PF02657 Fe-S metabolism associated domain CPA52_RS08740 PF00899 ThiF family CPA52_RS08745 PF00849 RNA pseudouridylate synthase CPA52_RS08750 PF02348 Cytidylyltransferase CPA52_RS08755 PF03966 Trm112p-like protein CPA52_RS08760 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CPA52_RS08765 PF00664 ABC transporter transmembrane region CPA52_RS08765 PF00005 ABC transporter CPA52_RS08770 PF00753 Metallo-beta-lactamase superfamily CPA52_RS08770 PF03772 Competence protein CPA52_RS08770 PF13567 Domain of unknown function (DUF4131) CPA52_RS08785 PF12848 ABC transporter CPA52_RS08785 PF00005 ABC transporter CPA52_RS08785 PF16326 ABC transporter C-terminal domain CPA52_RS08795 PF02926 THUMP domain CPA52_RS08795 PF10672 S-adenosylmethionine-dependent methyltransferase CPA52_RS08795 PF01170 Putative RNA methylase family UPF0020 CPA52_RS08800 PF07126 Cell-division protein ZapC CPA52_RS08805 PF01180 Dihydroorotate dehydrogenase CPA52_RS08810 PF05088 Bacterial NAD-glutamate dehydrogenase CPA52_RS08825 PF07044 Protein of unknown function (DUF1329) CPA52_RS08840 PF01433 Peptidase family M1 domain CPA52_RS08840 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CPA52_RS08840 PF11940 Domain of unknown function (DUF3458) Ig-like fold CPA52_RS08845 PF03553 Na+/H+ antiporter family CPA52_RS08850 PF11818 C-terminal domain of tail specific protease (DUF3340) CPA52_RS08850 PF00595 PDZ domain CPA52_RS08850 PF03572 Peptidase family S41 CPA52_RS08850 PF17804 Tail specific protease N-terminal domain CPA52_RS08855 PF04352 ProQ/FINO family CPA52_RS08855 PF17516 ProQ C-terminal domain CPA52_RS08865 PF13185 GAF domain CPA52_RS08885 PF00072 Response regulator receiver domain CPA52_RS08885 PF04397 LytTr DNA-binding domain CPA52_RS08900 PF01027 Inhibitor of apoptosis-promoting Bax1 CPA52_RS08905 PF02635 DsrE/DsrF-like family CPA52_RS08910 PF02635 DsrE/DsrF-like family CPA52_RS08920 PF04358 DsrC like protein CPA52_RS08925 PF00849 RNA pseudouridylate synthase CPA52_RS08930 PF00293 NUDIX domain CPA52_RS08935 PF00563 EAL domain CPA52_RS08935 PF00360 Phytochrome region CPA52_RS08935 PF01590 GAF domain CPA52_RS08935 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS08945 PF04356 Protein of unknown function (DUF489) CPA52_RS08950 PF00206 Lyase CPA52_RS08950 PF08328 Adenylosuccinate lyase C-terminal CPA52_RS08955 PF08007 Cupin superfamily protein CPA52_RS08970 PF04389 Peptidase family M28 CPA52_RS09000 PF00005 ABC transporter CPA52_RS09000 PF00664 ABC transporter transmembrane region CPA52_RS09015 PF00155 Aminotransferase class I and II CPA52_RS09020 PF01566 Natural resistance-associated macrophage protein CPA52_RS09030 PF07995 Glucose / Sorbosone dehydrogenase CPA52_RS09065 PF02403 Seryl-tRNA synthetase N-terminal domain CPA52_RS09065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPA52_RS09070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPA52_RS09075 PF12002 MgsA AAA+ ATPase C terminal CPA52_RS09075 PF16193 AAA C-terminal domain CPA52_RS09075 PF00004 ATPase family associated with various cellular activities (AAA) CPA52_RS09080 PF03548 Outer membrane lipoprotein carrier protein LolA CPA52_RS09085 PF01580 FtsK/SpoIIIE family CPA52_RS09085 PF09397 Ftsk gamma domain CPA52_RS09085 PF17854 FtsK alpha domain CPA52_RS09085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CPA52_RS09090 PF01037 Lrp/AsnC ligand binding domain CPA52_RS09095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CPA52_RS09095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CPA52_RS09100 PF13091 PLD-like domain CPA52_RS09105 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS09110 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CPA52_RS09115 PF04377 Arginine-tRNA-protein transferase, C terminus CPA52_RS09115 PF04376 Arginine-tRNA-protein transferase, N terminus CPA52_RS09120 PF01176 Translation initiation factor 1A / IF-1 CPA52_RS09125 PF00004 ATPase family associated with various cellular activities (AAA) CPA52_RS09125 PF07724 AAA domain (Cdc48 subfamily) CPA52_RS09125 PF17871 AAA lid domain CPA52_RS09125 PF02861 Clp amino terminal domain, pathogenicity island component CPA52_RS09125 PF10431 C-terminal, D2-small domain, of ClpB protein CPA52_RS09130 PF02617 ATP-dependent Clp protease adaptor protein ClpS CPA52_RS09135 PF00313 'Cold-shock' DNA-binding domain CPA52_RS09140 PF03971 Monomeric isocitrate dehydrogenase CPA52_RS09150 PF01979 Amidohydrolase family CPA52_RS09170 PF03881 Fructosamine kinase CPA52_RS09180 PF00677 Lumazine binding domain CPA52_RS09185 PF01554 MatE CPA52_RS09205 PF00759 Glycosyl hydrolase family 9 CPA52_RS09205 PF02927 Cellulase N-terminal ig-like domain CPA52_RS09210 PF00933 Glycosyl hydrolase family 3 N terminal domain CPA52_RS09210 PF01915 Glycosyl hydrolase family 3 C-terminal domain CPA52_RS09210 PF14310 Fibronectin type III-like domain CPA52_RS09220 PF04820 Tryptophan halogenase CPA52_RS09230 PF00933 Glycosyl hydrolase family 3 N terminal domain CPA52_RS09230 PF07691 PA14 domain CPA52_RS09230 PF14310 Fibronectin type III-like domain CPA52_RS09230 PF01915 Glycosyl hydrolase family 3 C-terminal domain CPA52_RS09235 PF00083 Sugar (and other) transporter CPA52_RS09240 PF00356 Bacterial regulatory proteins, lacI family CPA52_RS09245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPA52_RS09245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPA52_RS09260 PF18415 Histidine kinase receptor ArcB trans-membrane domain CPA52_RS09260 PF00989 PAS fold CPA52_RS09260 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS09260 PF00072 Response regulator receiver domain CPA52_RS09260 PF01627 Hpt domain CPA52_RS09265 PF01933 Uncharacterised protein family UPF0052 CPA52_RS09275 PF00534 Glycosyl transferases group 1 CPA52_RS09275 PF13439 Glycosyltransferase Family 4 CPA52_RS09280 PF02954 Bacterial regulatory protein, Fis family CPA52_RS09280 PF00072 Response regulator receiver domain CPA52_RS09280 PF00158 Sigma-54 interaction domain CPA52_RS09285 PF12431 Transcriptional regulator CPA52_RS09285 PF00072 Response regulator receiver domain CPA52_RS09290 PF13614 AAA domain CPA52_RS09310 PF02397 Bacterial sugar transferase CPA52_RS09315 PF13439 Glycosyltransferase Family 4 CPA52_RS09315 PF00534 Glycosyl transferases group 1 CPA52_RS09345 PF13439 Glycosyltransferase Family 4 CPA52_RS09345 PF00534 Glycosyl transferases group 1 CPA52_RS09350 PF00535 Glycosyl transferase family 2 CPA52_RS09375 PF04324 BFD-like [2Fe-2S] binding domain CPA52_RS09375 PF18267 Rubredoxin NAD+ reductase C-terminal domain CPA52_RS09375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS09375 PF13806 Rieske-like [2Fe-2S] domain CPA52_RS09375 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPA52_RS09375 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPA52_RS09380 PF13806 Rieske-like [2Fe-2S] domain CPA52_RS09385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPA52_RS09385 PF14824 Sirohaem biosynthesis protein central CPA52_RS09385 PF10414 Sirohaem synthase dimerisation region CPA52_RS09395 PF03473 MOSC domain CPA52_RS09395 PF03475 3-alpha domain CPA52_RS09400 PF02391 MoaE protein CPA52_RS09405 PF02597 ThiS family CPA52_RS09410 PF01967 MoaC family CPA52_RS09415 PF00994 Probable molybdopterin binding domain CPA52_RS09420 PF12804 MobA-like NTP transferase domain CPA52_RS09425 PF06463 Molybdenum Cofactor Synthesis C CPA52_RS09425 PF04055 Radical SAM superfamily CPA52_RS09430 PF01568 Molydopterin dinucleotide binding domain CPA52_RS09430 PF04324 BFD-like [2Fe-2S] binding domain CPA52_RS09430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPA52_RS09430 PF00384 Molybdopterin oxidoreductase CPA52_RS09435 PF18267 Rubredoxin NAD+ reductase C-terminal domain CPA52_RS09435 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CPA52_RS09435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS09435 PF04324 BFD-like [2Fe-2S] binding domain CPA52_RS09435 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CPA52_RS09445 PF03793 PASTA domain CPA52_RS09445 PF00069 Protein kinase domain CPA52_RS09450 PF07690 Major Facilitator Superfamily CPA52_RS09455 PF00899 ThiF family CPA52_RS09460 PF03459 TOBE domain CPA52_RS09460 PF00005 ABC transporter CPA52_RS09465 PF00528 Binding-protein-dependent transport system inner membrane component CPA52_RS09475 PF00994 Probable molybdopterin binding domain CPA52_RS09475 PF03454 MoeA C-terminal region (domain IV) CPA52_RS09475 PF03453 MoeA N-terminal region (domain I and II) CPA52_RS09495 PF04303 PrpF protein CPA52_RS09500 PF00694 Aconitase C-terminal domain CPA52_RS09500 PF00330 Aconitase family (aconitate hydratase) CPA52_RS09505 PF00285 Citrate synthase, C-terminal domain CPA52_RS09515 PF00392 Bacterial regulatory proteins, gntR family CPA52_RS09515 PF07729 FCD domain CPA52_RS09520 PF01189 16S rRNA methyltransferase RsmB/F CPA52_RS09520 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CPA52_RS09520 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CPA52_RS09535 PF13614 AAA domain CPA52_RS09535 PF13807 G-rich domain on putative tyrosine kinase CPA52_RS09535 PF02706 Chain length determinant protein CPA52_RS09540 PF02563 Polysaccharide biosynthesis/export protein CPA52_RS09560 PF00483 Nucleotidyl transferase CPA52_RS09570 PF00563 EAL domain CPA52_RS09570 PF00989 PAS fold CPA52_RS09570 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS09570 PF01590 GAF domain CPA52_RS09610 PF03692 Putative zinc- or iron-chelating domain CPA52_RS09615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPA52_RS09620 PF00873 AcrB/AcrD/AcrF family CPA52_RS09625 PF01738 Dienelactone hydrolase family CPA52_RS09650 PF03449 Transcription elongation factor, N-terminal CPA52_RS09650 PF01272 Transcription elongation factor, GreA/GreB, C-term CPA52_RS09655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPA52_RS09655 PF02142 MGS-like domain CPA52_RS09655 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPA52_RS09660 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPA52_RS09660 PF00117 Glutamine amidotransferase class-I CPA52_RS09665 PF01113 Dihydrodipicolinate reductase, N-terminus CPA52_RS09665 PF05173 Dihydrodipicolinate reductase, C-terminus CPA52_RS09680 PF00561 alpha/beta hydrolase fold CPA52_RS09690 PF07690 Major Facilitator Superfamily CPA52_RS09695 PF01025 GrpE CPA52_RS09700 PF01628 HrcA protein C terminal domain CPA52_RS09705 PF01513 ATP-NAD kinase CPA52_RS09715 PF02463 RecF/RecN/SMC N terminal domain CPA52_RS09725 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS09730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPA52_RS09730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS09735 PF00310 Glutamine amidotransferases class-II CPA52_RS09735 PF04898 Glutamate synthase central domain CPA52_RS09735 PF01645 Conserved region in glutamate synthase CPA52_RS09735 PF01493 GXGXG motif CPA52_RS09745 PF00005 ABC transporter CPA52_RS09750 PF00005 ABC transporter CPA52_RS09750 PF02687 FtsX-like permease family CPA52_RS09750 PF12704 MacB-like periplasmic core domain CPA52_RS09750 PF00005 ABC transporter CPA52_RS09750 PF12704 MacB-like periplasmic core domain CPA52_RS09750 PF02687 FtsX-like permease family CPA52_RS09755 PF00005 ABC transporter CPA52_RS09755 PF02687 FtsX-like permease family CPA52_RS09755 PF12704 MacB-like periplasmic core domain CPA52_RS09760 PF00072 Response regulator receiver domain CPA52_RS09760 PF00158 Sigma-54 interaction domain CPA52_RS09765 PF00672 HAMP domain CPA52_RS09765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS09765 PF18698 Histidine kinase sensor domain CPA52_RS09765 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS09765 PF00989 PAS fold CPA52_RS09770 PF00462 Glutaredoxin CPA52_RS09775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPA52_RS09775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPA52_RS09780 PF08298 PrkA AAA domain CPA52_RS09780 PF06798 PrkA serine protein kinase C-terminal domain CPA52_RS09785 PF04285 Protein of unknown function (DUF444) CPA52_RS09790 PF04293 SpoVR like protein CPA52_RS09795 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS09800 PF01339 CheB methylesterase CPA52_RS09800 PF00072 Response regulator receiver domain CPA52_RS09805 PF08534 Redoxin CPA52_RS09810 PF05191 Adenylate kinase, active site lid CPA52_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS09815 PF00183 Hsp90 protein CPA52_RS09820 PF00849 RNA pseudouridylate synthase CPA52_RS09825 PF07690 Major Facilitator Superfamily CPA52_RS09830 PF02132 RecR protein CPA52_RS09830 PF13662 Toprim domain CPA52_RS09835 PF02575 YbaB/EbfC DNA-binding family CPA52_RS09840 PF12169 DNA polymerase III subunits gamma and tau domain III CPA52_RS09840 PF12170 DNA polymerase III tau subunit V interacting with alpha CPA52_RS09840 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CPA52_RS09845 PF00156 Phosphoribosyl transferase domain CPA52_RS09855 PF09836 Putative DNA-binding domain CPA52_RS09860 PF05114 Protein of unknown function (DUF692) CPA52_RS09870 PF01207 Dihydrouridine synthase (Dus) CPA52_RS09890 PF03544 Gram-negative bacterial TonB protein C-terminal CPA52_RS09895 PF02472 Biopolymer transport protein ExbD/TolR CPA52_RS09900 PF01618 MotA/TolQ/ExbB proton channel family CPA52_RS09905 PF01618 MotA/TolQ/ExbB proton channel family CPA52_RS09920 PF00313 'Cold-shock' DNA-binding domain CPA52_RS09925 PF01979 Amidohydrolase family CPA52_RS09930 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS09930 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS09930 PF00563 EAL domain CPA52_RS09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS09935 PF03466 LysR substrate binding domain CPA52_RS09940 PF02698 DUF218 domain CPA52_RS09950 PF01784 NIF3 (NGG1p interacting factor 3) CPA52_RS09960 PF01979 Amidohydrolase family CPA52_RS09965 PF06167 Glucose-regulated metallo-peptidase M90 CPA52_RS09970 PF00302 Chloramphenicol acetyltransferase CPA52_RS09975 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPA52_RS09975 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPA52_RS09985 PF00425 chorismate binding enzyme CPA52_RS09985 PF04715 Anthranilate synthase component I, N terminal region CPA52_RS09995 PF03313 Serine dehydratase alpha chain CPA52_RS09995 PF03315 Serine dehydratase beta chain CPA52_RS10000 PF03466 LysR substrate binding domain CPA52_RS10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS10010 PF00860 Permease family CPA52_RS10025 PF02810 SEC-C motif CPA52_RS10055 PF01627 Hpt domain CPA52_RS10055 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS10055 PF00989 PAS fold CPA52_RS10055 PF18415 Histidine kinase receptor ArcB trans-membrane domain CPA52_RS10055 PF00072 Response regulator receiver domain CPA52_RS10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS10060 PF00072 Response regulator receiver domain CPA52_RS10070 PF01966 HD domain CPA52_RS10075 PF10672 S-adenosylmethionine-dependent methyltransferase CPA52_RS10075 PF17785 PUA-like domain CPA52_RS10085 PF00072 Response regulator receiver domain CPA52_RS10085 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS10090 PF00270 DEAD/DEAH box helicase CPA52_RS10090 PF11898 Domain of unknown function (DUF3418) CPA52_RS10090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CPA52_RS10090 PF04408 Helicase associated domain (HA2) CPA52_RS10090 PF00271 Helicase conserved C-terminal domain CPA52_RS10095 PF01112 Asparaginase CPA52_RS10105 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CPA52_RS10110 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CPA52_RS10110 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CPA52_RS10115 PF00342 Phosphoglucose isomerase CPA52_RS10120 PF00266 Aminotransferase class-V CPA52_RS10125 PF01594 AI-2E family transporter CPA52_RS10140 PF01435 Peptidase family M48 CPA52_RS10145 PF03960 ArsC family CPA52_RS10150 PF03358 NADPH-dependent FMN reductase CPA52_RS10165 PF05494 MlaC protein CPA52_RS10180 PF07670 Nucleoside recognition CPA52_RS10185 PF06804 NlpB/DapX lipoprotein CPA52_RS10195 PF01842 ACT domain CPA52_RS10200 PF00578 AhpC/TSA family CPA52_RS10220 PF04055 Radical SAM superfamily CPA52_RS10225 PF06508 Queuosine biosynthesis protein QueC CPA52_RS10250 PF17785 PUA-like domain CPA52_RS10250 PF10672 S-adenosylmethionine-dependent methyltransferase CPA52_RS10255 PF04851 Type III restriction enzyme, res subunit CPA52_RS10255 PF00271 Helicase conserved C-terminal domain CPA52_RS10255 PF17757 UvrB interaction domain CPA52_RS10255 PF12344 Ultra-violet resistance protein B CPA52_RS10255 PF02151 UvrB/uvrC motif CPA52_RS10260 PF01554 MatE CPA52_RS10285 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS10285 PF17157 Gammaproteobacterial periplasmic sensor domain CPA52_RS10285 PF00563 EAL domain CPA52_RS10290 PF02508 Rnf-Nqr subunit, membrane protein CPA52_RS10295 PF04060 Putative Fe-S cluster CPA52_RS10300 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CPA52_RS10300 PF10531 SLBB domain CPA52_RS10300 PF13375 RnfC Barrel sandwich hybrid domain CPA52_RS10300 PF12838 4Fe-4S dicluster domain CPA52_RS10305 PF03116 NQR2, RnfD, RnfE family CPA52_RS10310 PF04205 FMN-binding domain CPA52_RS10315 PF02508 Rnf-Nqr subunit, membrane protein CPA52_RS10320 PF00633 Helix-hairpin-helix motif CPA52_RS10320 PF00730 HhH-GPD superfamily base excision DNA repair protein CPA52_RS10320 PF10576 Iron-sulfur binding domain of endonuclease III CPA52_RS10325 PF13676 TIR domain CPA52_RS10340 PF02899 Phage integrase, N-terminal SAM-like domain CPA52_RS10340 PF00589 Phage integrase family CPA52_RS10410 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPA52_RS10410 PF01276 Orn/Lys/Arg decarboxylase, major domain CPA52_RS10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS10415 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS10415 PF09308 LuxQ, periplasmic CPA52_RS10415 PF00072 Response regulator receiver domain CPA52_RS10425 PF04542 Sigma-70 region 2 CPA52_RS10425 PF08281 Sigma-70, region 4 CPA52_RS10445 PF12833 Helix-turn-helix domain CPA52_RS10445 PF06719 AraC-type transcriptional regulator N-terminus CPA52_RS10450 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS10450 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS10450 PF00563 EAL domain CPA52_RS10470 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CPA52_RS10475 PF01116 Fructose-bisphosphate aldolase class-II CPA52_RS10480 PF01081 KDPG and KHG aldolase CPA52_RS10485 PF00294 pfkB family carbohydrate kinase CPA52_RS10490 PF07690 Major Facilitator Superfamily CPA52_RS10495 PF07883 Cupin domain CPA52_RS10500 PF05426 Alginate lyase CPA52_RS10500 PF07940 Heparinase II/III-like protein CPA52_RS10505 PF14592 Chondroitinase B CPA52_RS10510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPA52_RS10510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPA52_RS10515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPA52_RS10520 PF01258 Prokaryotic dksA/traR C4-type zinc finger CPA52_RS10525 PF05193 Peptidase M16 inactive domain CPA52_RS10525 PF00675 Insulinase (Peptidase family M16) CPA52_RS10605 PF00072 Response regulator receiver domain CPA52_RS10610 PF01641 SelR domain CPA52_RS10625 PF00533 BRCA1 C Terminus (BRCT) domain CPA52_RS10625 PF01653 NAD-dependent DNA ligase adenylation domain CPA52_RS10625 PF03120 NAD-dependent DNA ligase OB-fold domain CPA52_RS10625 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CPA52_RS10625 PF12826 Helix-hairpin-helix motif CPA52_RS10630 PF04354 ZipA, C-terminal FtsZ-binding domain CPA52_RS10635 PF06470 SMC proteins Flexible Hinge Domain CPA52_RS10635 PF02463 RecF/RecN/SMC N terminal domain CPA52_RS10640 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPA52_RS10640 PF00588 SpoU rRNA Methylase family CPA52_RS10645 PF05987 Bacterial protein of unknown function (DUF898) CPA52_RS10660 PF00491 Arginase family CPA52_RS10665 PF17810 Arginine decarboxylase helical bundle domain CPA52_RS10665 PF17944 Arginine decarboxylase C-terminal helical extension CPA52_RS10665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPA52_RS10675 PF00563 EAL domain CPA52_RS10675 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS10675 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS10680 PF13673 Acetyltransferase (GNAT) domain CPA52_RS10690 PF01728 FtsJ-like methyltransferase CPA52_RS10690 PF18125 RlmM ferredoxin-like domain CPA52_RS10695 PF04241 Protein of unknown function (DUF423) CPA52_RS10705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS10705 PF03466 LysR substrate binding domain CPA52_RS10710 PF00793 DAHP synthetase I family CPA52_RS10715 PF05684 Protein of unknown function (DUF819) CPA52_RS10730 PF11849 Domain of unknown function (DUF3369) CPA52_RS10735 PF05175 Methyltransferase small domain CPA52_RS10735 PF17827 PrmC N-terminal domain CPA52_RS10740 PF03462 PCRF domain CPA52_RS10740 PF00472 RF-1 domain CPA52_RS10745 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CPA52_RS10745 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CPA52_RS10745 PF01488 Shikimate / quinate 5-dehydrogenase CPA52_RS10750 PF03550 Outer membrane lipoprotein LolB CPA52_RS10755 PF08544 GHMP kinases C terminal CPA52_RS10755 PF00288 GHMP kinases N terminal domain CPA52_RS10760 PF14572 Phosphoribosyl synthetase-associated domain CPA52_RS10760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPA52_RS10765 PF14693 Ribosomal protein TL5, C-terminal domain CPA52_RS10765 PF01386 Ribosomal L25p family CPA52_RS10770 PF01195 Peptidyl-tRNA hydrolase CPA52_RS10775 PF06071 Protein of unknown function (DUF933) CPA52_RS10775 PF01926 50S ribosome-binding GTPase CPA52_RS10830 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS10830 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS10830 PF00563 EAL domain CPA52_RS10835 PF01494 FAD binding domain CPA52_RS10840 PF04055 Radical SAM superfamily CPA52_RS10840 PF01938 TRAM domain CPA52_RS10840 PF00919 Uncharacterized protein family UPF0004 CPA52_RS10845 PF02562 PhoH-like protein CPA52_RS10850 PF02130 Uncharacterized protein family UPF0054 CPA52_RS10855 PF00571 CBS domain CPA52_RS10855 PF03471 Transporter associated domain CPA52_RS10860 PF00795 Carbon-nitrogen hydrolase CPA52_RS10895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPA52_RS10895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CPA52_RS10900 PF13654 AAA domain CPA52_RS10900 PF05362 Lon protease (S16) C-terminal proteolytic domain CPA52_RS10905 PF07295 Zinc-ribbon containing domain CPA52_RS10910 PF08264 Anticodon-binding domain of tRNA CPA52_RS10910 PF13603 Leucyl-tRNA synthetase, Domain 2 CPA52_RS10910 PF00133 tRNA synthetases class I (I, L, M and V) CPA52_RS10915 PF04390 Lipopolysaccharide-assembly CPA52_RS10925 PF01467 Cytidylyltransferase-like CPA52_RS10935 PF02590 Predicted SPOUT methyltransferase CPA52_RS10940 PF00905 Penicillin binding protein transpeptidase domain CPA52_RS10940 PF03717 Penicillin-binding Protein dimerisation domain CPA52_RS10945 PF01098 Cell cycle protein CPA52_RS10950 PF05036 Sporulation related domain CPA52_RS10950 PF03330 Lytic transglycolase CPA52_RS10955 PF00768 D-alanyl-D-alanine carboxypeptidase CPA52_RS10955 PF07943 Penicillin-binding protein 5, C-terminal domain CPA52_RS10960 PF04359 Protein of unknown function (DUF493) CPA52_RS10965 PF03099 Biotin/lipoate A/B protein ligase family CPA52_RS10970 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CPA52_RS10970 PF04055 Radical SAM superfamily CPA52_RS10980 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CPA52_RS10990 PF03334 Na+/H+ antiporter subunit CPA52_RS10995 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CPA52_RS11000 PF01899 Na+/H+ ion antiporter subunit CPA52_RS11005 PF00361 Proton-conducting membrane transporter CPA52_RS11010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CPA52_RS11015 PF00361 Proton-conducting membrane transporter CPA52_RS11015 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CPA52_RS11015 PF13244 Domain of unknown function (DUF4040) CPA52_RS11015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPA52_RS11025 PF13181 Tetratricopeptide repeat CPA52_RS11025 PF07719 Tetratricopeptide repeat CPA52_RS11030 PF00575 S1 RNA binding domain CPA52_RS11030 PF03725 3' exoribonuclease family, domain 2 CPA52_RS11030 PF01138 3' exoribonuclease family, domain 1 CPA52_RS11030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPA52_RS11030 PF00013 KH domain CPA52_RS11035 PF00312 Ribosomal protein S15 CPA52_RS11040 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPA52_RS11040 PF16198 tRNA pseudouridylate synthase B C-terminal domain CPA52_RS11040 PF09157 Pseudouridine synthase II TruB, C-terminal CPA52_RS11045 PF02033 Ribosome-binding factor A CPA52_RS11050 PF11987 Translation-initiation factor 2 CPA52_RS11050 PF08364 Bacterial translation initiation factor IF-2 associated region CPA52_RS11050 PF04760 Translation initiation factor IF-2, N-terminal region CPA52_RS11050 PF00009 Elongation factor Tu GTP binding domain CPA52_RS11055 PF00575 S1 RNA binding domain CPA52_RS11055 PF08529 NusA N-terminal domain CPA52_RS11055 PF13184 NusA-like KH domain CPA52_RS11060 PF17384 RimP C-terminal SH3 domain CPA52_RS11060 PF02576 RimP N-terminal domain CPA52_RS11075 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CPA52_RS11080 PF00011 Hsp20/alpha crystallin family CPA52_RS11095 PF00462 Glutaredoxin CPA52_RS11100 PF00271 Helicase conserved C-terminal domain CPA52_RS11100 PF12343 Cold shock protein DEAD box A CPA52_RS11100 PF00270 DEAD/DEAH box helicase CPA52_RS11100 PF03880 DbpA RNA binding domain CPA52_RS11105 PF03806 AbgT putative transporter family CPA52_RS11110 PF08891 YfcL protein CPA52_RS11120 PF04315 Elongation factor P hydroxylase CPA52_RS11135 PF01264 Chorismate synthase CPA52_RS11140 PF05175 Methyltransferase small domain CPA52_RS11145 PF01713 Smr domain CPA52_RS11160 PF01042 Endoribonuclease L-PSP CPA52_RS11165 PF00300 Histidine phosphatase superfamily (branch 1) CPA52_RS11170 PF05193 Peptidase M16 inactive domain CPA52_RS11170 PF00675 Insulinase (Peptidase family M16) CPA52_RS11175 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS11175 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS11175 PF00563 EAL domain CPA52_RS11185 PF08207 Elongation factor P (EF-P) KOW-like domain CPA52_RS11185 PF01132 Elongation factor P (EF-P) OB domain CPA52_RS11185 PF09285 Elongation factor P, C-terminal CPA52_RS11190 PF04237 YjbR CPA52_RS11195 PF00378 Enoyl-CoA hydratase/isomerase CPA52_RS11195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CPA52_RS11195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CPA52_RS11200 PF02803 Thiolase, C-terminal domain CPA52_RS11200 PF00108 Thiolase, N-terminal domain CPA52_RS11205 PF07726 ATPase family associated with various cellular activities (AAA) CPA52_RS11205 PF17863 AAA lid domain CPA52_RS11210 PF01882 Protein of unknown function DUF58 CPA52_RS11225 PF07584 Aerotolerance regulator N-terminal CPA52_RS11225 PF13519 von Willebrand factor type A domain CPA52_RS11235 PF04542 Sigma-70 region 2 CPA52_RS11235 PF08281 Sigma-70, region 4 CPA52_RS11260 PF00109 Beta-ketoacyl synthase, N-terminal domain CPA52_RS11260 PF02801 Beta-ketoacyl synthase, C-terminal domain CPA52_RS11265 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CPA52_RS11265 PF01266 FAD dependent oxidoreductase CPA52_RS11275 PF13460 NAD(P)H-binding CPA52_RS11295 PF00929 Exonuclease CPA52_RS11300 PF00691 OmpA family CPA52_RS11300 PF18393 MotY N-terminal domain CPA52_RS11310 PF03222 Tryptophan/tyrosine permease family CPA52_RS11315 PF00155 Aminotransferase class I and II CPA52_RS11325 PF00072 Response regulator receiver domain CPA52_RS11325 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS11335 PF01253 Translation initiation factor SUI1 CPA52_RS11340 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS11340 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS11340 PF00563 EAL domain CPA52_RS11345 PF00800 Prephenate dehydratase CPA52_RS11345 PF01817 Chorismate mutase type II CPA52_RS11350 PF01817 Chorismate mutase type II CPA52_RS11350 PF02153 Prephenate dehydrogenase CPA52_RS11355 PF01245 Ribosomal protein L19 CPA52_RS11360 PF01746 tRNA (Guanine-1)-methyltransferase CPA52_RS11365 PF01782 RimM N-terminal domain CPA52_RS11365 PF05239 PRC-barrel domain CPA52_RS11370 PF00886 Ribosomal protein S16 CPA52_RS11375 PF00448 SRP54-type protein, GTPase domain CPA52_RS11375 PF02881 SRP54-type protein, helical bundle domain CPA52_RS11375 PF02978 Signal peptide binding domain CPA52_RS11380 PF01578 Cytochrome C assembly protein CPA52_RS11385 PF01595 Cyclin M transmembrane N-terminal domain CPA52_RS11385 PF03471 Transporter associated domain CPA52_RS11385 PF00571 CBS domain CPA52_RS11395 PF04262 Glutamate-cysteine ligase CPA52_RS11400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS11400 PF00672 HAMP domain CPA52_RS11405 PF07724 AAA domain (Cdc48 subfamily) CPA52_RS11405 PF02861 Clp amino terminal domain, pathogenicity island component CPA52_RS11405 PF17871 AAA lid domain CPA52_RS11405 PF00004 ATPase family associated with various cellular activities (AAA) CPA52_RS11405 PF10431 C-terminal, D2-small domain, of ClpB protein CPA52_RS11410 PF02578 Multi-copper polyphenol oxidoreductase laccase CPA52_RS11415 PF00849 RNA pseudouridylate synthase CPA52_RS11415 PF01479 S4 domain CPA52_RS11420 PF13525 Outer membrane lipoprotein CPA52_RS11425 PF00543 Nitrogen regulatory protein P-II CPA52_RS11430 PF07963 Prokaryotic N-terminal methylation motif CPA52_RS11430 PF00114 Pilin (bacterial filament) CPA52_RS11440 PF14245 Type IV pilin PilA CPA52_RS11440 PF07963 Prokaryotic N-terminal methylation motif CPA52_RS11445 PF05567 Neisseria PilC beta-propeller domain CPA52_RS11465 PF04397 LytTr DNA-binding domain CPA52_RS11465 PF00072 Response regulator receiver domain CPA52_RS11470 PF06580 Histidine kinase CPA52_RS11470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS11475 PF02401 LytB protein CPA52_RS11480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPA52_RS11485 PF01252 Signal peptidase (SPase) II CPA52_RS11490 PF08264 Anticodon-binding domain of tRNA CPA52_RS11490 PF06827 Zinc finger found in FPG and IleRS CPA52_RS11490 PF00133 tRNA synthetases class I (I, L, M and V) CPA52_RS11495 PF01687 Riboflavin kinase CPA52_RS11495 PF06574 FAD synthetase CPA52_RS11500 PF03023 Lipid II flippase MurJ CPA52_RS11505 PF01649 Ribosomal protein S20 CPA52_RS11510 PF00072 Response regulator receiver domain CPA52_RS11525 PF01713 Smr domain CPA52_RS11530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPA52_RS11540 PF01546 Peptidase family M20/M25/M40 CPA52_RS11540 PF07687 Peptidase dimerisation domain CPA52_RS11545 PF03922 OmpW family CPA52_RS11555 PF01584 CheW-like domain CPA52_RS11565 PF13614 AAA domain CPA52_RS11570 PF00691 OmpA family CPA52_RS11570 PF13677 Membrane MotB of proton-channel complex MotA/MotB CPA52_RS11575 PF01618 MotA/TolQ/ExbB proton channel family CPA52_RS11580 PF00072 Response regulator receiver domain CPA52_RS11580 PF01339 CheB methylesterase CPA52_RS11585 PF02895 Signal transducing histidine kinase, homodimeric domain CPA52_RS11585 PF01584 CheW-like domain CPA52_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS11585 PF01627 Hpt domain CPA52_RS11585 PF00072 Response regulator receiver domain CPA52_RS11590 PF04344 Chemotaxis phosphatase, CheZ CPA52_RS11595 PF00072 Response regulator receiver domain CPA52_RS11600 PF04545 Sigma-70, region 4 CPA52_RS11600 PF04542 Sigma-70 region 2 CPA52_RS11600 PF04539 Sigma-70 region 3 CPA52_RS11605 PF10609 NUBPL iron-transfer P-loop NTPase CPA52_RS11610 PF00448 SRP54-type protein, GTPase domain CPA52_RS11615 PF00771 FHIPEP family CPA52_RS11620 PF01312 FlhB HrpN YscU SpaS Family CPA52_RS11625 PF01311 Bacterial export proteins, family 1 CPA52_RS11630 PF01313 Bacterial export proteins, family 3 CPA52_RS11635 PF00813 FliP family CPA52_RS11640 PF04347 Flagellar biosynthesis protein, FliO CPA52_RS11645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPA52_RS11650 PF02154 Flagellar motor switch protein FliM CPA52_RS11650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPA52_RS11660 PF02120 Flagellar hook-length control protein FliK CPA52_RS11670 PF18269 T3SS EscN ATPase C-terminal domain CPA52_RS11670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPA52_RS11680 PF01706 FliG C-terminal domain CPA52_RS11680 PF14841 FliG middle domain CPA52_RS11680 PF14842 FliG N-terminal domain CPA52_RS11685 PF08345 Flagellar M-ring protein C-terminal CPA52_RS11685 PF01514 Secretory protein of YscJ/FliF family CPA52_RS11690 PF02049 Flagellar hook-basal body complex protein FliE CPA52_RS11695 PF02954 Bacterial regulatory protein, Fis family CPA52_RS11695 PF00158 Sigma-54 interaction domain CPA52_RS11695 PF00072 Response regulator receiver domain CPA52_RS11700 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS11700 PF13188 PAS domain CPA52_RS11705 PF00958 GMP synthase C terminal domain CPA52_RS11705 PF13302 Acetyltransferase (GNAT) domain CPA52_RS11705 PF03352 Methyladenine glycosylase CPA52_RS11705 PF13673 Acetyltransferase (GNAT) domain CPA52_RS11705 PF00117 Glutamine amidotransferase class-I CPA52_RS11710 PF00158 Sigma-54 interaction domain CPA52_RS11710 PF02954 Bacterial regulatory protein, Fis family CPA52_RS11710 PF06490 Flagellar regulatory protein FleQ CPA52_RS11715 PF00700 Bacterial flagellin C-terminal helical region CPA52_RS11715 PF00669 Bacterial flagellin N-terminal helical region CPA52_RS11720 PF00106 short chain dehydrogenase CPA52_RS11725 PF02348 Cytidylyltransferase CPA52_RS11735 PF00483 Nucleotidyl transferase CPA52_RS11745 PF08666 SAF domain CPA52_RS11745 PF03102 NeuB family CPA52_RS11750 PF02350 UDP-N-acetylglucosamine 2-epimerase CPA52_RS11755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPA52_RS11760 PF02719 Polysaccharide biosynthesis protein CPA52_RS11775 PF02561 Flagellar protein FliS CPA52_RS11780 PF07196 Flagellin hook IN motif CPA52_RS11780 PF07195 Flagellar hook-associated protein 2 C-terminus CPA52_RS11780 PF02465 Flagellar hook-associated protein 2 N-terminus CPA52_RS11790 PF00700 Bacterial flagellin C-terminal helical region CPA52_RS11790 PF07196 Flagellin hook IN motif CPA52_RS11790 PF00669 Bacterial flagellin N-terminal helical region CPA52_RS11795 PF00669 Bacterial flagellin N-terminal helical region CPA52_RS11795 PF07196 Flagellin hook IN motif CPA52_RS11795 PF00700 Bacterial flagellin C-terminal helical region CPA52_RS11800 PF00669 Bacterial flagellin N-terminal helical region CPA52_RS11800 PF07196 Flagellin hook IN motif CPA52_RS11800 PF00700 Bacterial flagellin C-terminal helical region CPA52_RS11810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPA52_RS11810 PF00460 Flagella basal body rod protein CPA52_RS11815 PF10135 Rod binding protein CPA52_RS11815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CPA52_RS11820 PF02119 Flagellar P-ring protein CPA52_RS11825 PF02107 Flagellar L-ring protein CPA52_RS11830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPA52_RS11830 PF00460 Flagella basal body rod protein CPA52_RS11835 PF00460 Flagella basal body rod protein CPA52_RS11835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPA52_RS11840 PF00460 Flagella basal body rod protein CPA52_RS11840 PF07559 Flagellar basal body protein FlaE CPA52_RS11840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPA52_RS11850 PF00460 Flagella basal body rod protein CPA52_RS11850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPA52_RS11855 PF00460 Flagella basal body rod protein CPA52_RS11860 PF01739 CheR methyltransferase, SAM binding domain CPA52_RS11860 PF03705 CheR methyltransferase, all-alpha domain CPA52_RS11865 PF01584 CheW-like domain CPA52_RS11865 PF00072 Response regulator receiver domain CPA52_RS11895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS11895 PF03466 LysR substrate binding domain CPA52_RS11900 PF08534 Redoxin CPA52_RS11900 PF00462 Glutaredoxin CPA52_RS11905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS11905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPA52_RS11915 PF12161 HsdM N-terminal domain CPA52_RS11915 PF02384 N-6 DNA Methylase CPA52_RS11955 PF00483 Nucleotidyl transferase CPA52_RS11960 PF00303 Thymidylate synthase CPA52_RS11965 PF01790 Prolipoprotein diacylglyceryl transferase CPA52_RS11970 PF01925 Sulfite exporter TauE/SafE CPA52_RS11975 PF02896 PEP-utilising enzyme, TIM barrel domain CPA52_RS11975 PF01590 GAF domain CPA52_RS11975 PF05524 PEP-utilising enzyme, N-terminal CPA52_RS11975 PF00391 PEP-utilising enzyme, mobile domain CPA52_RS11980 PF00293 NUDIX domain CPA52_RS11985 PF02976 DNA mismatch repair enzyme MutH CPA52_RS12000 PF00113 Enolase, C-terminal TIM barrel domain CPA52_RS12000 PF03952 Enolase, N-terminal domain CPA52_RS12005 PF00117 Glutamine amidotransferase class-I CPA52_RS12005 PF06418 CTP synthase N-terminus CPA52_RS12010 PF03819 MazG nucleotide pyrophosphohydrolase domain CPA52_RS12015 PF04607 Region found in RelA / SpoT proteins CPA52_RS12015 PF13291 ACT domain CPA52_RS12015 PF02824 TGS domain CPA52_RS12020 PF01938 TRAM domain CPA52_RS12020 PF05958 tRNA (Uracil-5-)-methyltransferase CPA52_RS12025 PF00672 HAMP domain CPA52_RS12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS12025 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS12025 PF01627 Hpt domain CPA52_RS12025 PF00072 Response regulator receiver domain CPA52_RS12025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CPA52_RS12030 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CPA52_RS12035 PF11967 Recombination protein O N terminal CPA52_RS12035 PF02565 Recombination protein O C terminal CPA52_RS12040 PF07650 KH domain CPA52_RS12040 PF01926 50S ribosome-binding GTPase CPA52_RS12045 PF00035 Double-stranded RNA binding motif CPA52_RS12045 PF14622 Ribonuclease-III-like CPA52_RS12050 PF10502 Signal peptidase, peptidase S26 CPA52_RS12055 PF00679 Elongation factor G C-terminus CPA52_RS12055 PF00009 Elongation factor Tu GTP binding domain CPA52_RS12055 PF03144 Elongation factor Tu domain 2 CPA52_RS12055 PF06421 GTP-binding protein LepA C-terminus CPA52_RS12065 PF17188 MucB/RseB C-terminal domain CPA52_RS12065 PF03888 MucB/RseB N-terminal domain CPA52_RS12075 PF04542 Sigma-70 region 2 CPA52_RS12075 PF08281 Sigma-70, region 4 CPA52_RS12080 PF00890 FAD binding domain CPA52_RS12080 PF02910 Fumarate reductase flavoprotein C-term CPA52_RS12090 PF03937 Flavinator of succinate dehydrogenase CPA52_RS12100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPA52_RS12115 PF04269 Protein of unknown function, DUF440 CPA52_RS12120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CPA52_RS12120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CPA52_RS12120 PF00378 Enoyl-CoA hydratase/isomerase CPA52_RS12130 PF04172 LrgB-like family CPA52_RS12135 PF05552 Conserved TM helix CPA52_RS12135 PF00924 Mechanosensitive ion channel CPA52_RS12140 PF00400 WD domain, G-beta repeat CPA52_RS12140 PF12894 Anaphase-promoting complex subunit 4 WD40 domain CPA52_RS12150 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS12150 PF01590 GAF domain CPA52_RS12150 PF00360 Phytochrome region CPA52_RS12150 PF00563 EAL domain CPA52_RS12180 PF00534 Glycosyl transferases group 1 CPA52_RS12180 PF13439 Glycosyltransferase Family 4 CPA52_RS12195 PF03572 Peptidase family S41 CPA52_RS12195 PF01471 Putative peptidoglycan binding domain CPA52_RS12195 PF17820 PDZ domain CPA52_RS12210 PF01842 ACT domain CPA52_RS12210 PF00551 Formyl transferase CPA52_RS12215 PF03806 AbgT putative transporter family CPA52_RS12220 PF00196 Bacterial regulatory proteins, luxR family CPA52_RS12220 PF00072 Response regulator receiver domain CPA52_RS12225 PF13193 AMP-binding enzyme C-terminal domain CPA52_RS12225 PF16177 Acetyl-coenzyme A synthetase N-terminus CPA52_RS12225 PF00501 AMP-binding enzyme CPA52_RS12235 PF00593 TonB dependent receptor CPA52_RS12235 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS12240 PF00154 recA bacterial DNA recombination protein CPA52_RS12245 PF02464 Competence-damaged protein CPA52_RS12250 PF05190 MutS family domain IV CPA52_RS12250 PF05192 MutS domain III CPA52_RS12250 PF05188 MutS domain II CPA52_RS12250 PF01624 MutS domain I CPA52_RS12250 PF00488 MutS domain V CPA52_RS12255 PF04542 Sigma-70 region 2 CPA52_RS12255 PF04539 Sigma-70 region 3 CPA52_RS12255 PF00140 Sigma-70 factor, region 1.2 CPA52_RS12255 PF04545 Sigma-70, region 4 CPA52_RS12260 PF01476 LysM domain CPA52_RS12260 PF01551 Peptidase family M23 CPA52_RS12265 PF09335 SNARE associated Golgi protein CPA52_RS12275 PF01975 Survival protein SurE CPA52_RS12280 PF01142 tRNA pseudouridine synthase D (TruD) CPA52_RS12285 PF02542 YgbB family CPA52_RS12290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPA52_RS12295 PF04977 Septum formation initiator CPA52_RS12340 PF00583 Acetyltransferase (GNAT) family CPA52_RS12350 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPA52_RS12355 PF06865 Pyrimidine/purine nucleoside phosphorylase CPA52_RS12360 PF00456 Transketolase, thiamine diphosphate binding domain CPA52_RS12360 PF02780 Transketolase, C-terminal domain CPA52_RS12360 PF02779 Transketolase, pyrimidine binding domain CPA52_RS12365 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPA52_RS12365 PF02772 S-adenosylmethionine synthetase, central domain CPA52_RS12365 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPA52_RS12375 PF01812 5-formyltetrahydrofolate cyclo-ligase family CPA52_RS12380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CPA52_RS12385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPA52_RS12385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPA52_RS12385 PF01842 ACT domain CPA52_RS12395 PF18073 Rubredoxin metal binding domain CPA52_RS12405 PF18429 Domain of unknown function (DUF5609) CPA52_RS12415 PF01026 TatD related DNase CPA52_RS12420 PF01243 Pyridoxamine 5'-phosphate oxidase CPA52_RS12420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CPA52_RS12425 PF03485 Arginyl tRNA synthetase N terminal domain CPA52_RS12425 PF00750 tRNA synthetases class I (R) CPA52_RS12425 PF05746 DALR anticodon binding domain CPA52_RS12430 PF00009 Elongation factor Tu GTP binding domain CPA52_RS12430 PF16658 Class II release factor RF3, C-terminal domain CPA52_RS12435 PF09308 LuxQ, periplasmic CPA52_RS12435 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS12435 PF00072 Response regulator receiver domain CPA52_RS12440 PF00583 Acetyltransferase (GNAT) family CPA52_RS12455 PF02540 NAD synthase CPA52_RS12455 PF00958 GMP synthase C terminal domain CPA52_RS12455 PF00117 Glutamine amidotransferase class-I CPA52_RS12460 PF00571 CBS domain CPA52_RS12460 PF00478 IMP dehydrogenase / GMP reductase domain CPA52_RS12465 PF02601 Exonuclease VII, large subunit CPA52_RS12465 PF13742 OB-fold nucleic acid binding domain CPA52_RS12475 PF06426 Serine acetyltransferase, N-terminal CPA52_RS12475 PF00132 Bacterial transferase hexapeptide (six repeats) CPA52_RS12480 PF00360 Phytochrome region CPA52_RS12480 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS12480 PF01590 GAF domain CPA52_RS12480 PF00563 EAL domain CPA52_RS12495 PF05193 Peptidase M16 inactive domain CPA52_RS12495 PF00675 Insulinase (Peptidase family M16) CPA52_RS12505 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS12505 PF01627 Hpt domain CPA52_RS12505 PF00672 HAMP domain CPA52_RS12505 PF00072 Response regulator receiver domain CPA52_RS12505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS12505 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CPA52_RS12515 PF00270 DEAD/DEAH box helicase CPA52_RS12515 PF00271 Helicase conserved C-terminal domain CPA52_RS12530 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPA52_RS12540 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS12545 PF01472 PUA domain CPA52_RS12545 PF00696 Amino acid kinase family CPA52_RS12570 PF00072 Response regulator receiver domain CPA52_RS12570 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS12575 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS12575 PF13755 Sensor N-terminal transmembrane domain CPA52_RS12575 PF13756 Stimulus-sensing domain CPA52_RS12575 PF00672 HAMP domain CPA52_RS12575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS12605 PF01966 HD domain CPA52_RS12605 PF01743 Poly A polymerase head domain CPA52_RS12605 PF12627 Probable RNA and SrmB- binding site of polymerase A CPA52_RS12620 PF00158 Sigma-54 interaction domain CPA52_RS12620 PF00072 Response regulator receiver domain CPA52_RS12630 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS12655 PF07969 Amidohydrolase family CPA52_RS12675 PF12404 Peptidase CPA52_RS12675 PF00883 Cytosol aminopeptidase family, catalytic domain CPA52_RS12680 PF03749 Sugar fermentation stimulation protein RE domain CPA52_RS12680 PF17746 SfsA N-terminal OB domain CPA52_RS12685 PF01258 Prokaryotic dksA/traR C4-type zinc finger CPA52_RS12690 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPA52_RS12695 PF01743 Poly A polymerase head domain CPA52_RS12695 PF12626 Polymerase A arginine-rich C-terminus CPA52_RS12695 PF12627 Probable RNA and SrmB- binding site of polymerase A CPA52_RS12700 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CPA52_RS12705 PF02548 Ketopantoate hydroxymethyltransferase CPA52_RS12710 PF02569 Pantoate-beta-alanine ligase CPA52_RS12720 PF12849 PBP superfamily domain CPA52_RS12725 PF11808 Phosphate regulon sensor protein PhoR CPA52_RS12725 PF00989 PAS fold CPA52_RS12725 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS12725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS12730 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS12730 PF00072 Response regulator receiver domain CPA52_RS12735 PF01116 Fructose-bisphosphate aldolase class-II CPA52_RS12740 PF00162 Phosphoglycerate kinase CPA52_RS12745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPA52_RS12745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPA52_RS12770 PF00478 IMP dehydrogenase / GMP reductase domain CPA52_RS12770 PF00571 CBS domain CPA52_RS12775 PF00474 Sodium:solute symporter family CPA52_RS12785 PF09456 RcsC Alpha-Beta-Loop (ABL) CPA52_RS12785 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS12785 PF00072 Response regulator receiver domain CPA52_RS12800 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS12800 PF08448 PAS fold CPA52_RS12815 PF00873 AcrB/AcrD/AcrF family CPA52_RS12820 PF00529 HlyD membrane-fusion protein of T1SS CPA52_RS12820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPA52_RS12840 PF02929 Beta galactosidase small chain CPA52_RS12840 PF16353 Domain of unknown function(DUF4981) CPA52_RS12840 PF00703 Glycosyl hydrolases family 2 CPA52_RS12840 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CPA52_RS12840 PF02837 Glycosyl hydrolases family 2, sugar binding domain CPA52_RS12845 PF00465 Iron-containing alcohol dehydrogenase CPA52_RS12850 PF12833 Helix-turn-helix domain CPA52_RS12850 PF06719 AraC-type transcriptional regulator N-terminus CPA52_RS12855 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS12855 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS12855 PF00563 EAL domain CPA52_RS12855 PF13188 PAS domain CPA52_RS12875 PF02469 Fasciclin domain CPA52_RS12880 PF04116 Fatty acid hydroxylase superfamily CPA52_RS12890 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CPA52_RS12890 PF12833 Helix-turn-helix domain CPA52_RS12910 PF13344 Haloacid dehalogenase-like hydrolase CPA52_RS12910 PF00293 NUDIX domain CPA52_RS12915 PF00501 AMP-binding enzyme CPA52_RS12915 PF13193 AMP-binding enzyme C-terminal domain CPA52_RS12915 PF16177 Acetyl-coenzyme A synthetase N-terminus CPA52_RS12920 PF00331 Glycosyl hydrolase family 10 CPA52_RS12920 PF02018 Carbohydrate binding domain CPA52_RS12920 PF00404 Dockerin type I domain CPA52_RS12920 PF00756 Putative esterase CPA52_RS12940 PF03150 Di-haem cytochrome c peroxidase CPA52_RS12945 PF05227 CHASE3 domain CPA52_RS12945 PF00672 HAMP domain CPA52_RS12945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS12965 PF00210 Ferritin-like domain CPA52_RS12980 PF08281 Sigma-70, region 4 CPA52_RS12980 PF04542 Sigma-70 region 2 CPA52_RS12990 PF09308 LuxQ, periplasmic CPA52_RS12990 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS12990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS12990 PF00072 Response regulator receiver domain CPA52_RS12995 PF08240 Alcohol dehydrogenase GroES-like domain CPA52_RS12995 PF00107 Zinc-binding dehydrogenase CPA52_RS13000 PF03466 LysR substrate binding domain CPA52_RS13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS13010 PF00378 Enoyl-CoA hydratase/isomerase CPA52_RS13020 PF12729 Four helix bundle sensory module for signal transduction CPA52_RS13020 PF00672 HAMP domain CPA52_RS13020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS13025 PF00266 Aminotransferase class-V CPA52_RS13040 PF04336 Acyl carrier protein phosphodiesterase CPA52_RS13090 PF05973 Phage derived protein Gp49-like (DUF891) CPA52_RS13110 PF02347 Glycine cleavage system P-protein CPA52_RS13115 PF01597 Glycine cleavage H-protein CPA52_RS13120 PF01571 Aminomethyltransferase folate-binding domain CPA52_RS13120 PF08669 Glycine cleavage T-protein C-terminal barrel domain CPA52_RS13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS13130 PF03466 LysR substrate binding domain CPA52_RS13135 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS13140 PF00588 SpoU rRNA Methylase family CPA52_RS13140 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPA52_RS13145 PF00575 S1 RNA binding domain CPA52_RS13145 PF17876 Cold shock domain CPA52_RS13145 PF08206 Ribonuclease B OB domain CPA52_RS13145 PF00773 RNB domain CPA52_RS13145 PF08461 Ribonuclease R winged-helix domain CPA52_RS13150 PF00378 Enoyl-CoA hydratase/isomerase CPA52_RS13155 PF00072 Response regulator receiver domain CPA52_RS13155 PF00196 Bacterial regulatory proteins, luxR family CPA52_RS13160 PF07730 Histidine kinase CPA52_RS13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS13170 PF03009 Glycerophosphoryl diester phosphodiesterase family CPA52_RS13175 PF00672 HAMP domain CPA52_RS13175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS13175 PF02743 Cache domain CPA52_RS13180 PF08331 Domain of unknown function (DUF1730) CPA52_RS13185 PF00072 Response regulator receiver domain CPA52_RS13190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS13190 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS13190 PF00989 PAS fold CPA52_RS13195 PF00583 Acetyltransferase (GNAT) family CPA52_RS13200 PF00255 Glutathione peroxidase CPA52_RS13210 PF02798 Glutathione S-transferase, N-terminal domain CPA52_RS13210 PF00043 Glutathione S-transferase, C-terminal domain CPA52_RS13225 PF11838 ERAP1-like C-terminal domain CPA52_RS13225 PF01433 Peptidase family M1 domain CPA52_RS13240 PF00485 Phosphoribulokinase / Uridine kinase family CPA52_RS13245 PF01931 Protein of unknown function DUF84 CPA52_RS13250 PF13419 Haloacid dehalogenase-like hydrolase CPA52_RS13255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CPA52_RS13260 PF00091 Tubulin/FtsZ family, GTPase domain CPA52_RS13260 PF12327 FtsZ family, C-terminal domain CPA52_RS13265 PF02491 SHS2 domain inserted in FTSA CPA52_RS13270 PF03799 Cell division protein FtsQ CPA52_RS13270 PF08478 POTRA domain, FtsQ-type CPA52_RS13275 PF01820 D-ala D-ala ligase N-terminus CPA52_RS13275 PF07478 D-ala D-ala ligase C-terminus CPA52_RS13280 PF08245 Mur ligase middle domain CPA52_RS13280 PF01225 Mur ligase family, catalytic domain CPA52_RS13280 PF02875 Mur ligase family, glutamate ligase domain CPA52_RS13285 PF04101 Glycosyltransferase family 28 C-terminal domain CPA52_RS13285 PF03033 Glycosyltransferase family 28 N-terminal domain CPA52_RS13290 PF01098 Cell cycle protein CPA52_RS13295 PF08245 Mur ligase middle domain CPA52_RS13295 PF02875 Mur ligase family, glutamate ligase domain CPA52_RS13300 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CPA52_RS13300 PF00953 Glycosyl transferase family 4 CPA52_RS13305 PF08245 Mur ligase middle domain CPA52_RS13305 PF01225 Mur ligase family, catalytic domain CPA52_RS13305 PF02875 Mur ligase family, glutamate ligase domain CPA52_RS13310 PF02875 Mur ligase family, glutamate ligase domain CPA52_RS13310 PF01225 Mur ligase family, catalytic domain CPA52_RS13310 PF08245 Mur ligase middle domain CPA52_RS13315 PF03717 Penicillin-binding Protein dimerisation domain CPA52_RS13315 PF00905 Penicillin binding protein transpeptidase domain CPA52_RS13320 PF04999 Cell division protein FtsL CPA52_RS13325 PF01795 MraW methylase family CPA52_RS13330 PF02381 MraZ protein, putative antitoxin-like CPA52_RS13350 PF13409 Glutathione S-transferase, N-terminal domain CPA52_RS13355 PF05726 Pirin C-terminal cupin domain CPA52_RS13355 PF02678 Pirin CPA52_RS13360 PF00563 EAL domain CPA52_RS13360 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS13360 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS13370 PF03631 Virulence factor BrkB CPA52_RS13375 PF05552 Conserved TM helix CPA52_RS13375 PF00924 Mechanosensitive ion channel CPA52_RS13385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPA52_RS13390 PF04348 LppC putative lipoprotein CPA52_RS13395 PF02021 Uncharacterised protein family UPF0102 CPA52_RS13400 PF13580 SIS domain CPA52_RS13405 PF04972 BON domain CPA52_RS13410 PF04386 Stringent starvation protein B CPA52_RS13415 PF02798 Glutathione S-transferase, N-terminal domain CPA52_RS13415 PF00043 Glutathione S-transferase, C-terminal domain CPA52_RS13420 PF02167 Cytochrome C1 family CPA52_RS13425 PF00032 Cytochrome b(C-terminal)/b6/petD CPA52_RS13425 PF00033 Cytochrome b/b6/petB CPA52_RS13430 PF00355 Rieske [2Fe-2S] domain CPA52_RS13430 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CPA52_RS13435 PF00380 Ribosomal protein S9/S16 CPA52_RS13440 PF00572 Ribosomal protein L13 CPA52_RS13445 PF03969 AFG1-like ATPase CPA52_RS13455 PF00595 PDZ domain CPA52_RS13455 PF13180 PDZ domain CPA52_RS13460 PF13180 PDZ domain CPA52_RS13465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPA52_RS13470 PF01722 BolA-like protein CPA52_RS13475 PF13466 STAS domain CPA52_RS13480 PF05494 MlaC protein CPA52_RS13485 PF02470 MlaD protein CPA52_RS13490 PF02405 Permease MlaE CPA52_RS13495 PF00005 ABC transporter CPA52_RS13500 PF01699 Sodium/calcium exchanger protein CPA52_RS13505 PF00571 CBS domain CPA52_RS13505 PF01380 SIS domain CPA52_RS13525 PF00005 ABC transporter CPA52_RS13525 PF12399 Branched-chain amino acid ATP-binding cassette transporter CPA52_RS13530 PF00309 Sigma-54 factor, Activator interacting domain (AID) CPA52_RS13530 PF04963 Sigma-54 factor, core binding domain CPA52_RS13530 PF04552 Sigma-54, DNA binding domain CPA52_RS13535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPA52_RS13540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CPA52_RS13545 PF03668 P-loop ATPase protein family CPA52_RS13550 PF00381 PTS HPr component phosphorylation site CPA52_RS13555 PF03448 MgtE intracellular N domain CPA52_RS13555 PF01769 Divalent cation transporter CPA52_RS13555 PF00571 CBS domain CPA52_RS13560 PF11842 Domain of unknown function (DUF3362) CPA52_RS13560 PF04055 Radical SAM superfamily CPA52_RS13560 PF08497 Radical SAM N-terminal CPA52_RS13565 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS13565 PF00563 EAL domain CPA52_RS13565 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS13605 PF04012 PspA/IM30 family CPA52_RS13610 PF01207 Dihydrouridine synthase (Dus) CPA52_RS13615 PF01914 MarC family integral membrane protein CPA52_RS13620 PF01475 Ferric uptake regulator family CPA52_RS13630 PF01894 Uncharacterised protein family UPF0047 CPA52_RS13650 PF00929 Exonuclease CPA52_RS13655 PF03193 RsgA GTPase CPA52_RS13660 PF02666 Phosphatidylserine decarboxylase CPA52_RS13665 PF00899 ThiF family CPA52_RS13670 PF02581 Thiamine monophosphate synthase CPA52_RS13675 PF05690 Thiazole biosynthesis protein ThiG CPA52_RS13685 PF01266 FAD dependent oxidoreductase CPA52_RS13690 PF13667 ThiC-associated domain CPA52_RS13690 PF01964 Radical SAM ThiC family CPA52_RS13705 PF07715 TonB-dependent Receptor Plug Domain CPA52_RS13710 PF00152 tRNA synthetases class II (D, K and N) CPA52_RS13715 PF08207 Elongation factor P (EF-P) KOW-like domain CPA52_RS13715 PF01132 Elongation factor P (EF-P) OB domain CPA52_RS13715 PF09285 Elongation factor P, C-terminal CPA52_RS13720 PF04055 Radical SAM superfamily CPA52_RS13740 PF01370 NAD dependent epimerase/dehydratase family CPA52_RS13745 PF03969 AFG1-like ATPase CPA52_RS13750 PF00849 RNA pseudouridylate synthase CPA52_RS13750 PF01479 S4 domain CPA52_RS13765 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CPA52_RS13780 PF00581 Rhodanese-like domain CPA52_RS13785 PF01467 Cytidylyltransferase-like CPA52_RS13790 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CPA52_RS13805 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS13805 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS13805 PF00563 EAL domain CPA52_RS13815 PF01259 SAICAR synthetase CPA52_RS13825 PF00005 ABC transporter CPA52_RS13845 PF00462 Glutaredoxin CPA52_RS13845 PF08534 Redoxin CPA52_RS13850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPA52_RS13850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPA52_RS13850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPA52_RS13865 PF00483 Nucleotidyl transferase CPA52_RS13880 PF02080 TrkA-C domain CPA52_RS13880 PF03600 Citrate transporter CPA52_RS13890 PF02397 Bacterial sugar transferase CPA52_RS13895 PF04321 RmlD substrate binding domain CPA52_RS13900 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CPA52_RS13905 PF00483 Nucleotidyl transferase CPA52_RS13910 PF16363 GDP-mannose 4,6 dehydratase CPA52_RS13925 PF01370 NAD dependent epimerase/dehydratase family CPA52_RS13940 PF00535 Glycosyl transferase family 2 CPA52_RS13950 PF00009 Elongation factor Tu GTP binding domain CPA52_RS13960 PF01507 Phosphoadenosine phosphosulfate reductase family CPA52_RS13965 PF13807 G-rich domain on putative tyrosine kinase CPA52_RS13965 PF02706 Chain length determinant protein CPA52_RS13965 PF13614 AAA domain CPA52_RS13970 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPA52_RS13975 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CPA52_RS13975 PF10531 SLBB domain CPA52_RS13975 PF02563 Polysaccharide biosynthesis/export protein CPA52_RS13980 PF02357 Transcription termination factor nusG CPA52_RS13985 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPA52_RS13985 PF00753 Metallo-beta-lactamase superfamily CPA52_RS13985 PF10996 Beta-Casp domain CPA52_RS13990 PF02719 Polysaccharide biosynthesis protein CPA52_RS13995 PF02397 Bacterial sugar transferase CPA52_RS14000 PF01370 NAD dependent epimerase/dehydratase family CPA52_RS14005 PF13579 Glycosyl transferase 4-like domain CPA52_RS14010 PF02350 UDP-N-acetylglucosamine 2-epimerase CPA52_RS14015 PF01370 NAD dependent epimerase/dehydratase family CPA52_RS14020 PF02719 Polysaccharide biosynthesis protein CPA52_RS14020 PF08485 Polysaccharide biosynthesis protein C-terminal CPA52_RS14055 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CPA52_RS14060 PF04321 RmlD substrate binding domain CPA52_RS14065 PF00483 Nucleotidyl transferase CPA52_RS14070 PF16363 GDP-mannose 4,6 dehydratase CPA52_RS14085 PF04338 Protein of unknown function, DUF481 CPA52_RS14090 PF05552 Conserved TM helix CPA52_RS14090 PF00924 Mechanosensitive ion channel CPA52_RS14120 PF00211 Adenylate and Guanylate cyclase catalytic domain CPA52_RS14130 PF00171 Aldehyde dehydrogenase family CPA52_RS14135 PF00111 2Fe-2S iron-sulfur cluster binding domain CPA52_RS14140 PF00012 Hsp70 protein CPA52_RS14145 PF07743 HSCB C-terminal oligomerisation domain CPA52_RS14150 PF01521 Iron-sulphur cluster biosynthesis CPA52_RS14155 PF01592 NifU-like N terminal domain CPA52_RS14160 PF00266 Aminotransferase class-V CPA52_RS14165 PF02082 Transcriptional regulator CPA52_RS14170 PF00588 SpoU rRNA Methylase family CPA52_RS14175 PF04445 Putative SAM-dependent methyltransferase CPA52_RS14180 PF00072 Response regulator receiver domain CPA52_RS14185 PF01432 Peptidase family M3 CPA52_RS14190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPA52_RS14190 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS14195 PF05552 Conserved TM helix CPA52_RS14195 PF00924 Mechanosensitive ion channel CPA52_RS14200 PF01523 Putative modulator of DNA gyrase CPA52_RS14205 PF00795 Carbon-nitrogen hydrolase CPA52_RS14210 PF13116 Protein of unknown function CPA52_RS14210 PF13502 AsmA-like C-terminal region CPA52_RS14215 PF00575 S1 RNA binding domain CPA52_RS14215 PF10150 Ribonuclease E/G family CPA52_RS14220 PF02545 Maf-like protein CPA52_RS14225 PF04093 rod shape-determining protein MreD CPA52_RS14230 PF04085 rod shape-determining protein MreC CPA52_RS14240 PF03781 Sulfatase-modifying factor enzyme 1 CPA52_RS14250 PF00291 Pyridoxal-phosphate dependent enzyme CPA52_RS14260 PF00436 Single-strand binding protein family CPA52_RS14265 PF07690 Major Facilitator Superfamily CPA52_RS14270 PF00005 ABC transporter CPA52_RS14270 PF17755 UvrA DNA-binding domain CPA52_RS14270 PF17760 UvrA interaction domain CPA52_RS14275 PF00072 Response regulator receiver domain CPA52_RS14275 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS14295 PF00579 tRNA synthetases class I (W and Y) CPA52_RS14300 PF13419 Haloacid dehalogenase-like hydrolase CPA52_RS14305 PF00834 Ribulose-phosphate 3 epimerase family CPA52_RS14320 PF02086 D12 class N6 adenine-specific DNA methyltransferase CPA52_RS14330 PF01761 3-dehydroquinate synthase CPA52_RS14335 PF01202 Shikimate kinase CPA52_RS14340 PF03958 Bacterial type II/III secretion system short domain CPA52_RS14340 PF00263 Bacterial type II and III secretion system protein CPA52_RS14340 PF11741 AMIN domain CPA52_RS14340 PF07660 Secretin and TonB N terminus short domain CPA52_RS14350 PF04350 Pilus assembly protein, PilO CPA52_RS14355 PF05137 Fimbrial assembly protein (PilN) CPA52_RS14360 PF11104 Type IV pilus assembly protein PilM; CPA52_RS14365 PF00912 Transglycosylase CPA52_RS14365 PF00905 Penicillin binding protein transpeptidase domain CPA52_RS14365 PF17092 Penicillin-binding protein OB-like domain CPA52_RS14370 PF00742 Homoserine dehydrogenase CPA52_RS14370 PF00696 Amino acid kinase family CPA52_RS14370 PF03447 Homoserine dehydrogenase, NAD binding domain CPA52_RS14375 PF01053 Cys/Met metabolism PLP-dependent enzyme CPA52_RS14380 PF01340 Met Apo-repressor, MetJ CPA52_RS14385 PF00390 Malic enzyme, N-terminal domain CPA52_RS14385 PF03949 Malic enzyme, NAD binding domain CPA52_RS14390 PF01197 Ribosomal protein L31 CPA52_RS14395 PF00270 DEAD/DEAH box helicase CPA52_RS14395 PF18074 Primosomal protein N C-terminal domain CPA52_RS14395 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CPA52_RS14395 PF17764 3′ DNA-binding domain (3′BD) CPA52_RS14395 PF00271 Helicase conserved C-terminal domain CPA52_RS14400 PF05036 Sporulation related domain CPA52_RS14405 PF00227 Proteasome subunit CPA52_RS14410 PF07724 AAA domain (Cdc48 subfamily) CPA52_RS14410 PF10431 C-terminal, D2-small domain, of ClpB protein CPA52_RS14410 PF00004 ATPase family associated with various cellular activities (AAA) CPA52_RS14420 PF00672 HAMP domain CPA52_RS14420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS14430 PF01569 PAP2 superfamily CPA52_RS14435 PF03737 Aldolase/RraA CPA52_RS14445 PF00563 EAL domain CPA52_RS14445 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS14445 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS14450 PF01979 Amidohydrolase family CPA52_RS14455 PF07702 UTRA domain CPA52_RS14455 PF00392 Bacterial regulatory proteins, gntR family CPA52_RS14460 PF01175 Urocanase Rossmann-like domain CPA52_RS14460 PF17392 Urocanase C-terminal domain CPA52_RS14460 PF17391 Urocanase N-terminal domain CPA52_RS14465 PF00221 Aromatic amino acid lyase CPA52_RS14470 PF01370 NAD dependent epimerase/dehydratase family CPA52_RS14475 PF07517 SecA DEAD-like domain CPA52_RS14475 PF01043 SecA preprotein cross-linking domain CPA52_RS14475 PF02810 SEC-C motif CPA52_RS14475 PF07516 SecA Wing and Scaffold domain CPA52_RS14480 PF00293 NUDIX domain CPA52_RS14485 PF01636 Phosphotransferase enzyme family CPA52_RS14490 PF05649 Peptidase family M13 CPA52_RS14490 PF01431 Peptidase family M13 CPA52_RS14500 PF01523 Putative modulator of DNA gyrase CPA52_RS14505 PF04751 Protein of unknown function (DUF615) CPA52_RS14510 PF04055 Radical SAM superfamily CPA52_RS14510 PF06969 HemN C-terminal domain CPA52_RS14515 PF10675 Protein of unknown function (DUF2489) CPA52_RS14520 PF04220 Der GTPase activator (YihI) CPA52_RS14525 PF00034 Cytochrome c CPA52_RS14530 PF01926 50S ribosome-binding GTPase CPA52_RS14545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPA52_RS14545 PF01612 3'-5' exonuclease CPA52_RS14545 PF00476 DNA polymerase family A CPA52_RS14545 PF01367 5'-3' exonuclease, C-terminal SAM fold CPA52_RS14555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CPA52_RS14560 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS14560 PF00563 EAL domain CPA52_RS14560 PF03707 Bacterial signalling protein N terminal repeat CPA52_RS14565 PF00580 UvrD/REP helicase N-terminal domain CPA52_RS14565 PF13361 UvrD-like helicase C-terminal domain CPA52_RS14570 PF04380 Membrane fusogenic activity CPA52_RS14580 PF00484 Carbonic anhydrase CPA52_RS14595 PF00291 Pyridoxal-phosphate dependent enzyme CPA52_RS14595 PF00585 C-terminal regulatory domain of Threonine dehydratase CPA52_RS14600 PF00920 Dehydratase family CPA52_RS14610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPA52_RS14610 PF00205 Thiamine pyrophosphate enzyme, central domain CPA52_RS14610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPA52_RS14620 PF00072 Response regulator receiver domain CPA52_RS14620 PF09308 LuxQ, periplasmic CPA52_RS14620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS14620 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS14635 PF18029 Glyoxalase-like domain CPA52_RS14635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPA52_RS14655 PF01219 Prokaryotic diacylglycerol kinase CPA52_RS14660 PF00156 Phosphoribosyl transferase domain CPA52_RS14665 PF01138 3' exoribonuclease family, domain 1 CPA52_RS14665 PF03725 3' exoribonuclease family, domain 2 CPA52_RS14670 PF03755 YicC-like family, N-terminal region CPA52_RS14670 PF08340 Domain of unknown function (DUF1732) CPA52_RS14675 PF00625 Guanylate kinase CPA52_RS14680 PF01192 RNA polymerase Rpb6 CPA52_RS14685 PF04607 Region found in RelA / SpoT proteins CPA52_RS14685 PF02824 TGS domain CPA52_RS14685 PF13291 ACT domain CPA52_RS14690 PF01042 Endoribonuclease L-PSP CPA52_RS14700 PF03590 Aspartate-ammonia ligase CPA52_RS14705 PF01037 Lrp/AsnC ligand binding domain CPA52_RS14710 PF00588 SpoU rRNA Methylase family CPA52_RS14710 PF12105 SpoU, rRNA methylase, C-terminal CPA52_RS14715 PF17191 RecG wedge domain CPA52_RS14715 PF00271 Helicase conserved C-terminal domain CPA52_RS14715 PF00270 DEAD/DEAH box helicase CPA52_RS14745 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CPA52_RS14750 PF01177 Asp/Glu/Hydantoin racemase CPA52_RS14760 PF05958 tRNA (Uracil-5-)-methyltransferase CPA52_RS14765 PF04463 Protein of unknown function (DUF523) CPA52_RS14770 PF01323 DSBA-like thioredoxin domain CPA52_RS14775 PF01323 DSBA-like thioredoxin domain CPA52_RS14780 PF01636 Phosphotransferase enzyme family CPA52_RS14785 PF12801 4Fe-4S binding domain CPA52_RS14785 PF13746 4Fe-4S dicluster domain CPA52_RS14785 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CPA52_RS14805 PF01203 Type II secretion system (T2SS), protein N CPA52_RS14815 PF05134 Type II secretion system (T2SS), protein L CPA52_RS14815 PF12693 GspL periplasmic domain CPA52_RS14820 PF03934 Type II secretion system (T2SS), protein K CPA52_RS14825 PF07963 Prokaryotic N-terminal methylation motif CPA52_RS14825 PF11612 Type II secretion system (T2SS), protein J CPA52_RS14830 PF07963 Prokaryotic N-terminal methylation motif CPA52_RS14830 PF02501 Type II secretion system (T2SS), protein I CPA52_RS14835 PF07963 Prokaryotic N-terminal methylation motif CPA52_RS14835 PF12019 Type II transport protein GspH CPA52_RS14840 PF07963 Prokaryotic N-terminal methylation motif CPA52_RS14840 PF08334 Type II secretion system (T2SS), protein G CPA52_RS14845 PF00482 Type II secretion system (T2SS), protein F CPA52_RS14850 PF00437 Type II/IV secretion system protein CPA52_RS14855 PF00263 Bacterial type II and III secretion system protein CPA52_RS14855 PF03958 Bacterial type II/III secretion system short domain CPA52_RS14860 PF11356 Type II secretion system protein C CPA52_RS14865 PF01479 S4 domain CPA52_RS14870 PF01430 Hsp33 protein CPA52_RS14875 PF01293 Phosphoenolpyruvate carboxykinase CPA52_RS14895 PF01196 Ribosomal protein L17 CPA52_RS14900 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPA52_RS14900 PF01000 RNA polymerase Rpb3/RpoA insert domain CPA52_RS14900 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPA52_RS14905 PF00163 Ribosomal protein S4/S9 N-terminal domain CPA52_RS14905 PF01479 S4 domain CPA52_RS14910 PF00411 Ribosomal protein S11 CPA52_RS14915 PF00416 Ribosomal protein S13/S18 CPA52_RS14920 PF00444 Ribosomal protein L36 CPA52_RS14925 PF00344 SecY translocase CPA52_RS14930 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPA52_RS14935 PF00327 Ribosomal protein L30p/L7e CPA52_RS14940 PF00333 Ribosomal protein S5, N-terminal domain CPA52_RS14940 PF03719 Ribosomal protein S5, C-terminal domain CPA52_RS14945 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CPA52_RS14950 PF00347 Ribosomal protein L6 CPA52_RS14955 PF00410 Ribosomal protein S8 CPA52_RS14960 PF00253 Ribosomal protein S14p/S29e CPA52_RS14965 PF00673 ribosomal L5P family C-terminus CPA52_RS14965 PF00281 Ribosomal protein L5 CPA52_RS14970 PF00467 KOW motif CPA52_RS14970 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CPA52_RS14975 PF00238 Ribosomal protein L14p/L23e CPA52_RS15010 PF13533 Biotin-lipoyl like CPA52_RS15015 PF00005 ABC transporter CPA52_RS15020 PF02687 FtsX-like permease family CPA52_RS15020 PF12704 MacB-like periplasmic core domain CPA52_RS15030 PF06291 Bor protein CPA52_RS15040 PF00005 ABC transporter CPA52_RS15050 PF00529 HlyD membrane-fusion protein of T1SS CPA52_RS15050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPA52_RS15055 PF00873 AcrB/AcrD/AcrF family CPA52_RS15060 PF01022 Bacterial regulatory protein, arsR family CPA52_RS15085 PF11852 Domain of unknown function (DUF3372) CPA52_RS15085 PF03714 Bacterial pullanase-associated domain CPA52_RS15085 PF18494 Pullulanase Ins domain CPA52_RS15085 PF17967 Pullulanase N2 domain CPA52_RS15085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPA52_RS15095 PF01810 LysE type translocator CPA52_RS15110 PF00664 ABC transporter transmembrane region CPA52_RS15110 PF00005 ABC transporter CPA52_RS15115 PF13488 Glycine zipper CPA52_RS15115 PF00691 OmpA family CPA52_RS15125 PF00924 Mechanosensitive ion channel CPA52_RS15130 PF01553 Acyltransferase CPA52_RS15135 PF01553 Acyltransferase CPA52_RS15140 PF17810 Arginine decarboxylase helical bundle domain CPA52_RS15140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPA52_RS15140 PF17944 Arginine decarboxylase C-terminal helical extension CPA52_RS15145 PF17284 Spermidine synthase tetramerisation domain CPA52_RS15150 PF00672 HAMP domain CPA52_RS15150 PF02743 Cache domain CPA52_RS15150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS15165 PF14508 Glycosyl-hydrolase 97 N-terminal CPA52_RS15165 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CPA52_RS15165 PF10566 Glycoside hydrolase 97 CPA52_RS15170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS15170 PF00672 HAMP domain CPA52_RS15170 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS15175 PF00072 Response regulator receiver domain CPA52_RS15175 PF00486 Transcriptional regulatory protein, C terminal CPA52_RS15180 PF01272 Transcription elongation factor, GreA/GreB, C-term CPA52_RS15180 PF03449 Transcription elongation factor, N-terminal CPA52_RS15195 PF16921 Tex protein YqgF-like domain CPA52_RS15195 PF09371 Tex-like protein N-terminal domain CPA52_RS15195 PF00575 S1 RNA binding domain CPA52_RS15195 PF17674 HHH domain CPA52_RS15210 PF00561 alpha/beta hydrolase fold CPA52_RS15215 PF00156 Phosphoribosyl transferase domain CPA52_RS15225 PF01106 NifU-like domain CPA52_RS15225 PF01521 Iron-sulphur cluster biosynthesis CPA52_RS15235 PF01554 MatE CPA52_RS15240 PF01522 Polysaccharide deacetylase CPA52_RS15245 PF01339 CheB methylesterase CPA52_RS15245 PF00072 Response regulator receiver domain CPA52_RS15250 PF03975 CheD chemotactic sensory transduction CPA52_RS15255 PF01739 CheR methyltransferase, SAM binding domain CPA52_RS15255 PF03705 CheR methyltransferase, all-alpha domain CPA52_RS15260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS15260 PF08447 PAS fold CPA52_RS15260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPA52_RS15260 PF08447 PAS fold CPA52_RS15260 PF13426 PAS domain CPA52_RS15260 PF13426 PAS domain CPA52_RS15265 PF01584 CheW-like domain CPA52_RS15270 PF09078 CheY binding CPA52_RS15270 PF02895 Signal transducing histidine kinase, homodimeric domain CPA52_RS15270 PF01584 CheW-like domain CPA52_RS15270 PF01627 Hpt domain CPA52_RS15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS15275 PF00072 Response regulator receiver domain CPA52_RS15285 PF02630 SCO1/SenC CPA52_RS15290 PF01040 UbiA prenyltransferase family CPA52_RS15295 PF02628 Cytochrome oxidase assembly protein CPA52_RS15315 PF00510 Cytochrome c oxidase subunit III CPA52_RS15320 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CPA52_RS15325 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPA52_RS15330 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CPA52_RS15330 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CPA52_RS15335 PF00717 Peptidase S24-like CPA52_RS15335 PF01726 LexA DNA binding domain CPA52_RS15340 PF03061 Thioesterase superfamily CPA52_RS15370 PF03466 LysR substrate binding domain CPA52_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPA52_RS15375 PF03358 NADPH-dependent FMN reductase CPA52_RS15400 PF00694 Aconitase C-terminal domain CPA52_RS15405 PF00330 Aconitase family (aconitate hydratase) CPA52_RS15410 PF00180 Isocitrate/isopropylmalate dehydrogenase CPA52_RS15415 PF00682 HMGL-like CPA52_RS15415 PF08502 LeuA allosteric (dimerisation) domain CPA52_RS15420 PF00440 Bacterial regulatory proteins, tetR family CPA52_RS15430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPA52_RS15430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPA52_RS15435 PF01208 Uroporphyrinogen decarboxylase (URO-D) CPA52_RS15440 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CPA52_RS15445 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CPA52_RS15445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPA52_RS15455 PF04102 SlyX CPA52_RS15460 PF09526 Probable metal-binding protein (DUF2387) CPA52_RS15465 PF12848 ABC transporter CPA52_RS15465 PF00005 ABC transporter CPA52_RS15475 PF00561 alpha/beta hydrolase fold CPA52_RS15480 PF06794 Uncharacterised protein family (UPF0270) CPA52_RS15490 PF03143 Elongation factor Tu C-terminal domain CPA52_RS15490 PF03144 Elongation factor Tu domain 2 CPA52_RS15490 PF00009 Elongation factor Tu GTP binding domain CPA52_RS15515 PF03309 Type III pantothenate kinase CPA52_RS15520 PF08279 HTH domain CPA52_RS15520 PF02237 Biotin protein ligase C terminal domain CPA52_RS15520 PF03099 Biotin/lipoate A/B protein ligase family CPA52_RS15525 PF01565 FAD binding domain CPA52_RS15525 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPA52_RS15530 PF01433 Peptidase family M1 domain CPA52_RS15540 PF01230 HIT domain CPA52_RS15550 PF00072 Response regulator receiver domain CPA52_RS15550 PF01627 Hpt domain CPA52_RS15550 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS15550 PF17149 Periplasmic sensor domain found in signal transduction proteins CPA52_RS15550 PF00672 HAMP domain CPA52_RS15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS15555 PF01050 Mannose-6-phosphate isomerase CPA52_RS15555 PF00483 Nucleotidyl transferase CPA52_RS15560 PF00795 Carbon-nitrogen hydrolase CPA52_RS15565 PF00155 Aminotransferase class I and II CPA52_RS15570 PF01645 Conserved region in glutamate synthase CPA52_RS15580 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS15585 PF01209 ubiE/COQ5 methyltransferase family CPA52_RS15595 PF03109 ABC1 family CPA52_RS15600 PF02416 mttA/Hcf106 family CPA52_RS15605 PF02416 mttA/Hcf106 family CPA52_RS15610 PF00902 Sec-independent protein translocase protein (TatC) CPA52_RS15620 PF01026 TatD related DNase CPA52_RS15625 PF00563 EAL domain CPA52_RS15625 PF00360 Phytochrome region CPA52_RS15625 PF00990 Diguanylate cyclase, GGDEF domain CPA52_RS15625 PF01590 GAF domain CPA52_RS15630 PF00490 Delta-aminolevulinic acid dehydratase CPA52_RS15640 PF04349 Periplasmic glucan biosynthesis protein, MdoG CPA52_RS15645 PF00535 Glycosyl transferase family 2 CPA52_RS15650 PF00009 Elongation factor Tu GTP binding domain CPA52_RS15650 PF03764 Elongation factor G, domain IV CPA52_RS15650 PF03144 Elongation factor Tu domain 2 CPA52_RS15650 PF14492 Elongation Factor G, domain II CPA52_RS15650 PF00679 Elongation factor G C-terminus CPA52_RS15660 PF01926 50S ribosome-binding GTPase CPA52_RS15665 PF07152 YaeQ protein CPA52_RS15680 PF00210 Ferritin-like domain CPA52_RS15685 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CPA52_RS15685 PF00326 Prolyl oligopeptidase family CPA52_RS15690 PF18416 N-acetylglucosamine binding protein domain 2 CPA52_RS15690 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CPA52_RS15700 PF03591 AzlC protein CPA52_RS15710 PF00255 Glutathione peroxidase CPA52_RS15740 PF00266 Aminotransferase class-V CPA52_RS15745 PF08933 Domain of unknown function (DUF1864) CPA52_RS15750 PF01037 Lrp/AsnC ligand binding domain CPA52_RS15755 PF00512 His Kinase A (phospho-acceptor) domain CPA52_RS15755 PF00072 Response regulator receiver domain CPA52_RS15755 PF09308 LuxQ, periplasmic CPA52_RS15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS15780 PF10415 Fumarase C C-terminus CPA52_RS15780 PF00206 Lyase CPA52_RS15860 PF00132 Bacterial transferase hexapeptide (six repeats) CPA52_RS15870 PF08501 Shikimate dehydrogenase substrate binding domain CPA52_RS15870 PF01488 Shikimate / quinate 5-dehydrogenase CPA52_RS15870 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CPA52_RS15875 PF01152 Bacterial-like globin CPA52_RS15880 PF01218 Coproporphyrinogen III oxidase CPA52_RS15885 PF01300 Telomere recombination CPA52_RS15890 PF01396 Topoisomerase DNA binding C4 zinc finger CPA52_RS15890 PF01131 DNA topoisomerase CPA52_RS15890 PF01751 Toprim domain CPA52_RS15895 PF04361 Protein of unknown function (DUF494) CPA52_RS15900 PF17782 DprA winged helix domain CPA52_RS15900 PF02481 DNA recombination-mediator protein A CPA52_RS15910 PF01327 Polypeptide deformylase CPA52_RS15915 PF02911 Formyl transferase, C-terminal domain CPA52_RS15915 PF00551 Formyl transferase CPA52_RS15920 PF01189 16S rRNA methyltransferase RsmB/F CPA52_RS15920 PF01029 NusB family CPA52_RS15925 PF02080 TrkA-C domain CPA52_RS15925 PF02254 TrkA-N domain CPA52_RS15950 PF02386 Cation transport protein CPA52_RS15955 PF09186 Domain of unknown function (DUF1949) CPA52_RS15955 PF01205 Uncharacterized protein family UPF0029 CPA52_RS15960 PF00557 Metallopeptidase family M24 CPA52_RS15965 PF01464 Transglycosylase SLT domain CPA52_RS15965 PF14718 Soluble lytic murein transglycosylase L domain CPA52_RS15970 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CPA52_RS15970 PF00378 Enoyl-CoA hydratase/isomerase CPA52_RS15970 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CPA52_RS15975 PF02803 Thiolase, C-terminal domain CPA52_RS15975 PF00108 Thiolase, N-terminal domain CPA52_RS15980 PF01206 Sulfurtransferase TusA CPA52_RS15990 PF02092 Glycyl-tRNA synthetase beta subunit CPA52_RS15990 PF05746 DALR anticodon binding domain CPA52_RS15995 PF02091 Glycyl-tRNA synthetase alpha subunit CPA52_RS16000 PF00204 DNA gyrase B CPA52_RS16000 PF00986 DNA gyrase B subunit, carboxyl terminus CPA52_RS16000 PF18053 DNA gyrase B subunit insert domain CPA52_RS16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPA52_RS16000 PF01751 Toprim domain CPA52_RS16005 PF02463 RecF/RecN/SMC N terminal domain CPA52_RS16010 PF00712 DNA polymerase III beta subunit, N-terminal domain CPA52_RS16010 PF02767 DNA polymerase III beta subunit, central domain CPA52_RS16010 PF02768 DNA polymerase III beta subunit, C-terminal domain