S40542_RS10945 1d3874b3781feedf3a3bb5b5412a4321 168 Pfam PF00583 Acetyltransferase (GNAT) family 50 138 7.0E-11 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS10945 1d3874b3781feedf3a3bb5b5412a4321 168 Gene3D G3DSA:3.40.630.30 1 161 1.5E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS10945 1d3874b3781feedf3a3bb5b5412a4321 168 SUPERFAMILY SSF55729 1 161 1.89E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS11295 fa3328112c73d5b28312dad9535ba05b 370 SUPERFAMILY SSF53474 20 157 8.56E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11295 fa3328112c73d5b28312dad9535ba05b 370 Pfam PF05057 Putative serine esterase (DUF676) 54 141 7.8E-6 T 11-11-2016 IPR007751 Domain of unknown function DUF676, lipase-like S40542_RS11295 fa3328112c73d5b28312dad9535ba05b 370 Gene3D G3DSA:3.40.50.1820 42 119 1.6E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 PIRSF PIRSF004486 1 311 3.4E-109 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.114 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 Pfam PF01795 MraW methylase family 5 310 8.8E-116 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 Gene3D G3DSA:1.10.150.170 114 216 2.5E-38 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 SUPERFAMILY SSF53335 214 311 1.28E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 SUPERFAMILY SSF53335 7 114 1.28E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 SUPERFAMILY SSF81799 115 214 2.09E-35 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 Gene3D G3DSA:3.40.50.150 217 311 5.0E-52 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 Gene3D G3DSA:3.40.50.150 7 111 5.0E-52 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18780 83e82fdd1c55b47467115826aadcb28a 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 310 9.0E-126 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 Gene3D G3DSA:1.10.10.10 9 96 1.6E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 Pfam PF13424 Tetratricopeptide repeat 448 517 1.3E-8 T 11-11-2016 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SUPERFAMILY SSF46894 4 96 1.39E-13 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SMART SM00028 487 520 240.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SMART SM00028 447 480 2.6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SMART SM00028 286 319 19.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SMART SM00028 407 440 5.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 92 1.0E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 Gene3D G3DSA:1.25.40.10 286 518 7.5E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SUPERFAMILY SSF48452 286 353 9.87E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SUPERFAMILY SSF48452 407 437 9.87E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SMART SM00862 23 93 1.7E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS16135 dea601aa6c36ccbefb3a95cf1a064e2c 542 SUPERFAMILY SSF48452 381 522 1.77E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 7.9E-37 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 7.9E-37 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 7.9E-37 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 7.9E-37 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 1.2E-23 T 11-11-2016 IPR019489 Clp ATPase, C-terminal S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Gene3D G3DSA:3.40.50.300 445 667 4.3E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Gene3D G3DSA:1.10.8.60 355 439 1.0E-29 T 11-11-2016 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 SUPERFAMILY SSF52540 172 429 4.05E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 11-11-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Gene3D G3DSA:1.10.1780.10 1 142 1.8E-41 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Gene3D G3DSA:1.10.8.60 668 749 3.3E-31 T 11-11-2016 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 SMART SM01086 656 745 1.3E-35 T 11-11-2016 IPR019489 Clp ATPase, C-terminal S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Gene3D G3DSA:3.40.50.300 171 352 1.3E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 SMART SM00382 490 657 1.5E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 SMART SM00382 209 354 1.2E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 2.3E-49 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 SUPERFAMILY SSF52540 440 741 3.68E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.0E-13 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 SUPERFAMILY SSF81923 1 142 3.01E-59 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 S40542_RS09390 9a5471f20e2613290a31c05a6c7c01c8 754 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 5.1E-11 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS09995 7e899e6347d7756476875bc84f9d3b60 442 Gene3D G3DSA:3.40.50.300 2 220 8.2E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09995 7e899e6347d7756476875bc84f9d3b60 442 SUPERFAMILY SSF52540 32 353 7.92E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09995 7e899e6347d7756476875bc84f9d3b60 442 Pfam PF00270 DEAD/DEAH box helicase 25 194 4.6E-50 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS09995 7e899e6347d7756476875bc84f9d3b60 442 SMART SM00487 20 223 3.5E-51 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS09995 7e899e6347d7756476875bc84f9d3b60 442 Pfam PF00271 Helicase conserved C-terminal domain 236 341 2.9E-27 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS09995 7e899e6347d7756476875bc84f9d3b60 442 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site S40542_RS09995 7e899e6347d7756476875bc84f9d3b60 442 Gene3D G3DSA:3.40.50.300 221 369 7.2E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09995 7e899e6347d7756476875bc84f9d3b60 442 SMART SM00490 260 341 1.7E-28 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS03005 ea931cdf91fe61e1107c48441929465f 256 SUPERFAMILY SSF55681 24 246 1.08E-45 T 11-11-2016 S40542_RS03005 ea931cdf91fe61e1107c48441929465f 256 Gene3D G3DSA:3.90.1550.10 15 245 6.6E-50 T 11-11-2016 S40542_RS03005 ea931cdf91fe61e1107c48441929465f 256 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 178 3.0E-6 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 S40542_RS00980 ddc21d46af9ec512720c69128b40f5ff 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 128 32.847 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 S40542_RS00980 ddc21d46af9ec512720c69128b40f5ff 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 11-11-2016 IPR018102 Ribosomal S11, conserved site S40542_RS00980 ddc21d46af9ec512720c69128b40f5ff 128 Pfam PF00411 Ribosomal protein S11 18 127 2.9E-51 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 S40542_RS00980 ddc21d46af9ec512720c69128b40f5ff 128 Gene3D G3DSA:3.30.420.80 7 128 8.5E-55 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 S40542_RS00980 ddc21d46af9ec512720c69128b40f5ff 128 SUPERFAMILY SSF53137 13 128 1.5E-47 T 11-11-2016 S40542_RS00980 ddc21d46af9ec512720c69128b40f5ff 128 PIRSF PIRSF002131 1 128 2.1E-52 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 S40542_RS00980 ddc21d46af9ec512720c69128b40f5ff 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 6.9E-56 T 11-11-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS08550 ef7f6c135f1b2e86147bb89c402d9327 196 Gene3D G3DSA:1.20.5.810 23 55 5.2E-4 T 11-11-2016 S40542_RS08550 ef7f6c135f1b2e86147bb89c402d9327 196 SUPERFAMILY SSF69118 15 181 2.88E-30 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 S40542_RS08550 ef7f6c135f1b2e86147bb89c402d9327 196 Gene3D G3DSA:1.20.1290.10 64 179 1.6E-19 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 S40542_RS02150 b40b66d7e9a2d79d4b02f37b5f502838 207 PIRSF PIRSF001488 1 207 2.7E-41 T 11-11-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL S40542_RS02150 b40b66d7e9a2d79d4b02f37b5f502838 207 Pfam PF01323 DSBA-like thioredoxin domain 42 186 2.7E-11 T 11-11-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 S40542_RS02150 b40b66d7e9a2d79d4b02f37b5f502838 207 Gene3D G3DSA:3.40.30.10 1 120 5.9E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS02150 b40b66d7e9a2d79d4b02f37b5f502838 207 Gene3D G3DSA:3.40.30.10 123 205 1.5E-15 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS02150 b40b66d7e9a2d79d4b02f37b5f502838 207 SUPERFAMILY SSF52833 21 206 1.45E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS06675 094202ebae673d400f5af73a33199057 256 Gene3D G3DSA:2.160.10.10 2 189 3.6E-52 T 11-11-2016 S40542_RS06675 094202ebae673d400f5af73a33199057 256 PIRSF PIRSF000456 1 256 3.7E-108 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 S40542_RS06675 094202ebae673d400f5af73a33199057 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 255 7.3E-108 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 S40542_RS06675 094202ebae673d400f5af73a33199057 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 5.1E-28 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 S40542_RS06675 094202ebae673d400f5af73a33199057 256 SUPERFAMILY SSF51161 2 256 8.87E-84 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS06675 094202ebae673d400f5af73a33199057 256 Gene3D G3DSA:1.20.1180.10 191 256 5.0E-25 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 S40542_RS06675 094202ebae673d400f5af73a33199057 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 5.7E-8 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS06675 094202ebae673d400f5af73a33199057 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 46 3.8E-12 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS06675 094202ebae673d400f5af73a33199057 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 44.936 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 S40542_RS06675 094202ebae673d400f5af73a33199057 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 147 175 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 S40542_RS20275 05245abc152ee6b5aaf99b68a55ed2aa 478 Pfam PF00155 Aminotransferase class I and II 125 449 4.8E-29 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS20275 05245abc152ee6b5aaf99b68a55ed2aa 478 SMART SM00345 11 70 8.1E-13 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS20275 05245abc152ee6b5aaf99b68a55ed2aa 478 Gene3D G3DSA:3.90.1150.10 335 468 1.8E-19 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS20275 05245abc152ee6b5aaf99b68a55ed2aa 478 Gene3D G3DSA:1.10.10.10 2 70 9.4E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20275 05245abc152ee6b5aaf99b68a55ed2aa 478 SUPERFAMILY SSF53383 95 468 7.75E-87 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS20275 05245abc152ee6b5aaf99b68a55ed2aa 478 Gene3D G3DSA:3.40.640.10 136 334 2.7E-45 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS20275 05245abc152ee6b5aaf99b68a55ed2aa 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 1.9E-13 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS20275 05245abc152ee6b5aaf99b68a55ed2aa 478 SUPERFAMILY SSF46785 3 80 4.36E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01130 4b28025818007160c55b91e209519601 692 SUPERFAMILY SSF55729 474 537 7.32E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01130 4b28025818007160c55b91e209519601 692 SUPERFAMILY SSF55729 380 438 7.32E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01130 4b28025818007160c55b91e209519601 692 Pfam PF05127 Helicase 196 356 3.8E-44 T 11-11-2016 IPR007807 Helicase domain Reactome: R-HSA-6790901 S40542_RS01130 4b28025818007160c55b91e209519601 692 SUPERFAMILY SSF52540 174 295 3.7E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01130 4b28025818007160c55b91e209519601 692 Pfam PF13718 GNAT acetyltransferase 2 389 504 5.2E-25 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS01130 4b28025818007160c55b91e209519601 692 Pfam PF13718 GNAT acetyltransferase 2 506 552 2.9E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS01130 4b28025818007160c55b91e209519601 692 Gene3D G3DSA:3.40.630.30 394 437 4.8E-12 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01130 4b28025818007160c55b91e209519601 692 Gene3D G3DSA:3.40.630.30 473 534 4.8E-12 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01130 4b28025818007160c55b91e209519601 692 Gene3D G3DSA:3.40.50.300 173 295 1.9E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01130 4b28025818007160c55b91e209519601 692 Pfam PF08351 Domain of unknown function (DUF1726) 65 151 4.3E-11 T 11-11-2016 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF13492 GAF domain 827 968 2.3E-11 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SMART SM00065 826 976 5.3E-7 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SMART SM00086 1059 1102 1.2E-4 T 11-11-2016 IPR001610 PAC motif S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:3.30.565.10 1195 1347 4.3E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SMART SM00387 1234 1351 3.9E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF63829 41 161 5.89E-8 T 11-11-2016 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF52172 1499 1620 1.42E-35 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:3.30.450.40 800 976 2.4E-20 T 11-11-2016 IPR029016 GAF domain-like S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF63829 450 622 2.03E-17 T 11-11-2016 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF47384 1106 1188 8.04E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF63829 140 335 1.21E-14 T 11-11-2016 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF55874 1176 1347 2.88E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF47226 1642 1753 7.85E-19 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:1.20.120.160 1657 1754 2.6E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:1.10.287.130 1117 1183 5.9E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF00072 Response regulator receiver domain 1505 1615 2.4E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SMART SM00448 1502 1615 4.7E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SMART SM00388 1122 1187 4.0E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF07494 Two component regulator propeller 81 104 0.003 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF07494 Two component regulator propeller 177 200 0.0036 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF07494 Two component regulator propeller 129 152 0.0012 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF52172 1365 1497 3.98E-12 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF63825 380 487 4.97E-5 T 11-11-2016 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF08447 PAS fold 1006 1096 2.5E-16 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF07495 Y_Y_Y domain 697 758 3.3E-13 T 11-11-2016 IPR011123 Two component regulator three Y S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF01627 Hpt domain 1666 1730 1.4E-10 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:2.120.10.30 29 106 9.7E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF55781 826 979 1.59E-17 T 11-11-2016 IPR029016 GAF domain-like S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 976 1109 1.4E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1122 1187 1.3E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SUPERFAMILY SSF55785 987 1103 2.44E-18 T 11-11-2016 IPR000014 PAS domain S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:3.40.50.2300 1492 1623 3.5E-40 T 11-11-2016 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:3.40.50.2300 1366 1486 1.3E-9 T 11-11-2016 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:3.30.450.20 977 1116 6.5E-34 T 11-11-2016 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1294 1304 1.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1311 1329 1.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1276 1290 1.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1335 1348 1.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 SMART SM00091 980 1052 0.0026 T 11-11-2016 IPR000014 PAS domain S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:2.120.10.30 427 618 7.8E-14 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Gene3D G3DSA:2.120.10.30 141 330 1.1E-13 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS03085 c4b7c4566cb5d5fcf19ce6ee0558ad95 1845 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1234 1350 2.5E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 PIRSF PIRSF006107 1 714 0.0 T 11-11-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 Gene3D G3DSA:3.40.50.10750 525 683 4.1E-68 T 11-11-2016 S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 Gene3D G3DSA:3.40.1390.20 225 363 5.5E-36 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 Pfam PF07085 DRTGG domain 234 345 6.3E-32 T 11-11-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 SUPERFAMILY SSF75138 230 354 3.92E-30 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 396 707 1.0E-122 T 11-11-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 Gene3D G3DSA:3.40.50.300 2 140 1.5E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 Pfam PF13500 AAA domain 3 230 2.3E-35 T 11-11-2016 S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 SUPERFAMILY SSF53659 395 710 3.17E-92 T 11-11-2016 S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 SUPERFAMILY SSF52540 1 241 1.77E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12125 69392b082e201c5d950b89c77d6a48d0 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 407 707 5.4E-132 T 11-11-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 S40542_RS08930 1c6a84a8f1c29681a96bfcc959828972 436 Gene3D G3DSA:3.40.50.850 28 225 1.0E-24 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 S40542_RS08930 1c6a84a8f1c29681a96bfcc959828972 436 SUPERFAMILY SSF52499 35 223 2.09E-23 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 S40542_RS08930 1c6a84a8f1c29681a96bfcc959828972 436 Pfam PF00857 Isochorismatase family 42 213 3.7E-17 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 Gene3D G3DSA:3.80.10.10 838 1050 5.8E-20 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 Gene3D G3DSA:3.80.10.10 376 585 2.1E-23 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SUPERFAMILY SSF52058 150 406 9.69E-20 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 Pfam PF13855 Leucine rich repeat 412 464 7.6E-7 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 Gene3D G3DSA:3.80.10.10 272 375 8.3E-6 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SUPERFAMILY SSF52058 324 653 4.42E-29 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SUPERFAMILY SSF52058 768 1051 4.42E-25 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 Gene3D G3DSA:3.80.10.10 152 271 3.1E-10 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 Gene3D G3DSA:3.80.10.10 586 837 3.6E-27 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SUPERFAMILY SSF52058 640 803 1.26E-8 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 934 952 580.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 997 1015 590.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 472 493 230.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 251 271 400.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 745 766 580.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 692 712 440.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 850 868 620.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 829 847 200.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 451 470 42.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 916 931 260.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 430 448 330.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 871 889 480.0 T 11-11-2016 S40542_RS12865 39d73a90ca80e97f73c9851c0aceda9d 1064 SMART SM00364 976 995 19.0 T 11-11-2016 S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 8.0E-6 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 8.0E-6 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 SUPERFAMILY SSF46785 11 79 6.54E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 Gene3D G3DSA:1.10.10.10 9 78 9.1E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 Pfam PF00155 Aminotransferase class I and II 136 473 6.1E-22 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 Gene3D G3DSA:3.40.640.10 147 368 6.1E-56 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 Gene3D G3DSA:3.90.1150.10 374 474 1.8E-4 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 SUPERFAMILY SSF53383 111 477 9.71E-80 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 3.4E-16 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS08075 c25d71264b01e0351bf03e94475ba107 478 SMART SM00345 18 77 1.3E-13 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS04980 d63a7727e35ccda235c889b881974fa5 396 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 51.683 T 11-11-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS04980 d63a7727e35ccda235c889b881974fa5 396 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.3E-39 T 11-11-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS04980 d63a7727e35ccda235c889b881974fa5 396 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 1.6E-22 T 11-11-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS04980 d63a7727e35ccda235c889b881974fa5 396 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 9.9E-109 T 11-11-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS03750 f923c0524cd58617011ed42ca1f41179 161 SUPERFAMILY SSF46785 4 140 8.85E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03750 f923c0524cd58617011ed42ca1f41179 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 63 97 - T 11-11-2016 IPR023187 Transcriptional regulator MarR-type, conserved site S40542_RS03750 f923c0524cd58617011ed42ca1f41179 161 Gene3D G3DSA:1.10.10.10 2 139 3.4E-35 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03750 f923c0524cd58617011ed42ca1f41179 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.2E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 S40542_RS03750 f923c0524cd58617011ed42ca1f41179 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.2E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 S40542_RS03750 f923c0524cd58617011ed42ca1f41179 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.2E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 S40542_RS03750 f923c0524cd58617011ed42ca1f41179 161 SMART SM00347 24 124 2.8E-17 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 S40542_RS03750 f923c0524cd58617011ed42ca1f41179 161 Pfam PF01047 MarR family 31 89 3.1E-16 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 S40542_RS13600 e16ce5d94069d6a33b358a6baa07f474 104 Gene3D G3DSA:3.30.70.900 11 93 7.9E-21 T 11-11-2016 S40542_RS13600 e16ce5d94069d6a33b358a6baa07f474 104 SUPERFAMILY SSF54909 12 92 1.53E-18 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS13600 e16ce5d94069d6a33b358a6baa07f474 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 15 87 1.3E-9 T 11-11-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain S40542_RS13265 2355afd383bd0732c5f96d0aee1dc46c 580 SUPERFAMILY SSF53067 149 361 4.01E-9 T 11-11-2016 S40542_RS13265 2355afd383bd0732c5f96d0aee1dc46c 580 SUPERFAMILY SSF53067 3 32 4.01E-9 T 11-11-2016 S40542_RS13265 2355afd383bd0732c5f96d0aee1dc46c 580 SUPERFAMILY SSF53067 79 93 4.01E-9 T 11-11-2016 S40542_RS13265 2355afd383bd0732c5f96d0aee1dc46c 580 Pfam PF02543 Carbamoyltransferase N-terminus 5 356 3.5E-40 T 11-11-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 S40542_RS13265 2355afd383bd0732c5f96d0aee1dc46c 580 Pfam PF16861 Carbamoyltransferase C-terminus 410 579 4.5E-68 T 11-11-2016 IPR031730 Carbamoyltransferase, C-terminal S40542_RS19260 93dd814433d9bd08bb734a209aeb1dc3 78 Pfam PF00830 Ribosomal L28 family 3 62 2.5E-25 T 11-11-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19260 93dd814433d9bd08bb734a209aeb1dc3 78 SUPERFAMILY SSF143800 2 77 1.65E-29 T 11-11-2016 S40542_RS19260 93dd814433d9bd08bb734a209aeb1dc3 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 9.9E-26 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19260 93dd814433d9bd08bb734a209aeb1dc3 78 Gene3D G3DSA:2.30.170.40 2 78 9.5E-35 T 11-11-2016 S40542_RS19260 93dd814433d9bd08bb734a209aeb1dc3 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.449 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS04655 f0e251e9beee982db171a81077c4d68a 305 Pfam PF04960 Glutaminase 22 305 8.2E-107 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 S40542_RS04655 f0e251e9beee982db171a81077c4d68a 305 Hamap MF_00313 Glutaminase [glsA]. 4 305 43.108 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 S40542_RS04655 f0e251e9beee982db171a81077c4d68a 305 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 305 1.7E-119 T 11-11-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 S40542_RS04655 f0e251e9beee982db171a81077c4d68a 305 Gene3D G3DSA:3.40.710.10 2 305 6.3E-116 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS04655 f0e251e9beee982db171a81077c4d68a 305 SUPERFAMILY SSF56601 2 305 5.27E-107 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SUPERFAMILY SSF52172 1058 1180 8.54E-31 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Pfam PF00072 Response regulator receiver domain 1065 1172 3.3E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Gene3D G3DSA:1.10.287.130 803 871 4.7E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Gene3D G3DSA:3.40.50.2300 1059 1181 1.5E-33 T 11-11-2016 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SUPERFAMILY SSF47384 798 874 1.77E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SUPERFAMILY SSF46689 1273 1323 8.06E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 968 982 3.5E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1026 1039 3.5E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1002 1020 3.5E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 986 996 3.5E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Gene3D G3DSA:3.30.565.10 890 1036 1.0E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Gene3D G3DSA:1.10.10.60 1274 1324 2.1E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Pfam PF07494 Two component regulator propeller 40 62 0.012 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SUPERFAMILY SSF55874 877 1038 9.82E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SMART SM00387 927 1042 1.1E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SMART SM00388 811 876 1.1E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Pfam PF12833 Helix-turn-helix domain 1243 1320 8.4E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Pfam PF07495 Y_Y_Y domain 679 740 4.1E-9 T 11-11-2016 IPR011123 Two component regulator three Y S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SUPERFAMILY SSF63829 191 248 1.42E-7 T 11-11-2016 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SUPERFAMILY SSF63829 41 149 1.42E-7 T 11-11-2016 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 929 1038 1.1E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SMART SM00342 1237 1319 4.2E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SUPERFAMILY SSF63829 352 574 1.68E-15 T 11-11-2016 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Pfam PF00512 His Kinase A (phospho-acceptor) domain 812 874 5.8E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Gene3D G3DSA:1.10.10.60 1227 1273 1.2E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 SMART SM00448 1063 1175 1.5E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Gene3D G3DSA:2.120.10.30 80 162 6.2E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS08295 fac693544dc42a5ee0fe09bf75626827 1332 Gene3D G3DSA:2.130.10.10 382 569 7.9E-7 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 48 66 - T 11-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 Gene3D G3DSA:3.20.20.10 41 262 2.2E-48 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 213 230 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 PRINTS PR01182 Ornithine decarboxylase signature 46 73 3.8E-10 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 PRINTS PR01182 Ornithine decarboxylase signature 90 114 3.8E-10 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 PRINTS PR01182 Ornithine decarboxylase signature 327 337 3.8E-10 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 PRINTS PR01182 Ornithine decarboxylase signature 347 360 3.8E-10 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 68 80 1.6E-7 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 1.6E-7 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 48 66 1.6E-7 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 42 271 1.2E-31 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 292 378 1.2E-8 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 SUPERFAMILY SSF51419 21 273 1.02E-47 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 Gene3D G3DSA:2.40.37.10 263 400 2.3E-28 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS01430 f6023319906e9c8a793d02f83769ab2f 401 SUPERFAMILY SSF50621 242 390 9.84E-34 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS15355 5426d4b953f95e2cd1d76735528bb813 218 SUPERFAMILY SSF52402 3 217 1.39E-63 T 11-11-2016 S40542_RS15355 5426d4b953f95e2cd1d76735528bb813 218 Gene3D G3DSA:3.40.50.620 2 217 7.7E-72 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS15355 5426d4b953f95e2cd1d76735528bb813 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 202 1.4E-65 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 S40542_RS15355 5426d4b953f95e2cd1d76735528bb813 218 PIRSF PIRSF006293 1 218 4.2E-79 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 S40542_RS15355 5426d4b953f95e2cd1d76735528bb813 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 215 51.166 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 S40542_RS15355 5426d4b953f95e2cd1d76735528bb813 218 Pfam PF06508 Queuosine biosynthesis protein QueC 4 208 3.3E-69 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 S40542_RS15725 0412faf58cef06de01d14fd0174b3099 201 SUPERFAMILY SSF52833 3 195 4.05E-65 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS15725 0412faf58cef06de01d14fd0174b3099 201 Gene3D G3DSA:3.40.30.10 4 193 8.3E-68 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS15725 0412faf58cef06de01d14fd0174b3099 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 195 5.2E-9 T 11-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS15725 0412faf58cef06de01d14fd0174b3099 201 PIRSF PIRSF000239 1 199 1.3E-58 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS15725 0412faf58cef06de01d14fd0174b3099 201 Pfam PF00578 AhpC/TSA family 5 140 8.6E-34 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS08615 f0713c05e41ac6d6ba19e4acf6ceb4c8 543 SUPERFAMILY SSF63848 273 304 3.92E-6 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 S40542_RS08615 f0713c05e41ac6d6ba19e4acf6ceb4c8 543 Pfam PF03961 Protein of unknown function (DUF342) 75 537 1.1E-124 T 11-11-2016 IPR005646 Protein of unknown function DUF342 S40542_RS08615 f0713c05e41ac6d6ba19e4acf6ceb4c8 543 Gene3D G3DSA:2.160.20.70 273 304 1.6E-5 T 11-11-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Gene3D G3DSA:1.10.420.10 251 274 3.5E-42 T 11-11-2016 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Gene3D G3DSA:1.10.420.10 311 410 3.5E-42 T 11-11-2016 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Pfam PF00141 Peroxidase 83 398 7.7E-53 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Pfam PF00141 Peroxidase 406 711 1.2E-39 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Gene3D G3DSA:1.10.520.10 53 195 3.2E-68 T 11-11-2016 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Gene3D G3DSA:1.10.520.10 227 250 3.2E-68 T 11-11-2016 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 SUPERFAMILY SSF48113 30 433 2.95E-146 T 11-11-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 25 737 0.0 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Hamap MF_01961 Catalase-peroxidase [katG]. 6 737 39.327 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 ProSitePatterns PS00436 Peroxidases active site signature. 96 107 - T 11-11-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Gene3D G3DSA:1.10.520.10 435 590 1.4E-52 T 11-11-2016 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Gene3D G3DSA:1.10.520.10 715 736 1.4E-52 T 11-11-2016 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 Gene3D G3DSA:1.10.420.10 591 712 3.4E-45 T 11-11-2016 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00458 Haem peroxidase superfamily signature 96 110 2.9E-19 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00458 Haem peroxidase superfamily signature 156 173 2.9E-19 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00458 Haem peroxidase superfamily signature 174 186 2.9E-19 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00458 Haem peroxidase superfamily signature 642 657 2.9E-19 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 2.9E-19 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 58 71 3.1E-43 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 73 98 3.1E-43 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 3.1E-43 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 32 54 3.1E-43 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 483 509 3.1E-43 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 S40542_RS13615 776365b47d7aba1ae5fe953c1b9aceca 737 SUPERFAMILY SSF48113 433 736 8.4E-97 T 11-11-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 S40542_RS13640 42ea6e8f3045f1441dc9160aa34154e0 147 SUPERFAMILY SSF55729 1 113 7.62E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13640 42ea6e8f3045f1441dc9160aa34154e0 147 Gene3D G3DSA:3.40.630.30 6 110 3.1E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13640 42ea6e8f3045f1441dc9160aa34154e0 147 Pfam PF13508 Acetyltransferase (GNAT) domain 33 108 4.3E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 78 96 5.2E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 5.2E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 Hamap MF_00367 GTPase Era [era]. 5 296 35.426 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 Pfam PF01926 50S ribosome-binding GTPase 10 124 6.6E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 Pfam PF07650 KH domain 208 284 3.5E-18 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 279 5.2E-106 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 168 9.4E-36 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 Gene3D G3DSA:3.40.50.300 9 192 2.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 SUPERFAMILY SSF52540 10 204 1.03E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 SUPERFAMILY SSF54814 181 296 1.31E-43 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 S40542_RS15595 5fb9ed85a99a748293c61348d2ea5c2e 299 Gene3D G3DSA:3.30.300.20 193 293 5.0E-41 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS11500 9952c0cceb75b5662945b606407caf4e 404 SUPERFAMILY SSF53383 3 399 1.58E-108 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS11500 9952c0cceb75b5662945b606407caf4e 404 Gene3D G3DSA:3.40.640.10 34 281 3.4E-70 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS11500 9952c0cceb75b5662945b606407caf4e 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site S40542_RS11500 9952c0cceb75b5662945b606407caf4e 404 Gene3D G3DSA:3.90.1150.10 282 395 1.0E-26 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS11500 9952c0cceb75b5662945b606407caf4e 404 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 402 2.4E-147 T 11-11-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 S40542_RS11500 9952c0cceb75b5662945b606407caf4e 404 Pfam PF00266 Aminotransferase class-V 24 391 1.2E-126 T 11-11-2016 IPR000192 Aminotransferase class V domain S40542_RS00475 7bb2c6ebc1414b2418f421d112d2e5ab 627 SMART SM00267 447 621 4.4E-58 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00475 7bb2c6ebc1414b2418f421d112d2e5ab 627 Gene3D G3DSA:3.30.70.270 461 624 6.3E-55 T 11-11-2016 S40542_RS00475 7bb2c6ebc1414b2418f421d112d2e5ab 627 Pfam PF00990 Diguanylate cyclase, GGDEF domain 460 617 1.7E-44 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00475 7bb2c6ebc1414b2418f421d112d2e5ab 627 Pfam PF07695 7TM diverse intracellular signalling 186 388 1.3E-15 T 11-11-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 S40542_RS00475 7bb2c6ebc1414b2418f421d112d2e5ab 627 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 454 620 1.2E-45 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00475 7bb2c6ebc1414b2418f421d112d2e5ab 627 SUPERFAMILY SSF55073 463 622 3.14E-47 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS00475 7bb2c6ebc1414b2418f421d112d2e5ab 627 Pfam PF07696 7TMR-DISM extracellular 2 55 173 5.7E-22 T 11-11-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 S40542_RS03140 d913ef8a4089dd4612ab65bcb35b6f26 1509 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 154 251 2.0E-8 T 11-11-2016 IPR021868 Alpha-2-macroglobulin MG1 domain S40542_RS03140 d913ef8a4089dd4612ab65bcb35b6f26 1509 Pfam PF01835 MG2 domain 258 349 7.5E-12 T 11-11-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 S40542_RS03140 d913ef8a4089dd4612ab65bcb35b6f26 1509 SMART SM01359 613 754 1.6E-26 T 11-11-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 S40542_RS03140 d913ef8a4089dd4612ab65bcb35b6f26 1509 Pfam PF00207 Alpha-2-macroglobulin family 826 904 1.4E-5 T 11-11-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 S40542_RS03140 d913ef8a4089dd4612ab65bcb35b6f26 1509 SUPERFAMILY SSF48239 1024 1281 5.83E-27 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid S40542_RS03140 d913ef8a4089dd4612ab65bcb35b6f26 1509 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 613 754 2.8E-13 T 11-11-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 S40542_RS03140 d913ef8a4089dd4612ab65bcb35b6f26 1509 Gene3D G3DSA:1.50.10.20 1024 1281 3.3E-24 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid S40542_RS03140 d913ef8a4089dd4612ab65bcb35b6f26 1509 SMART SM01360 818 905 2.9E-9 T 11-11-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 S40542_RS19655 8962796342082a7d9d34e022bbbe8734 327 PIRSF PIRSF002825 16 321 2.0E-49 T 11-11-2016 IPR026045 Ferric binding protein S40542_RS19655 8962796342082a7d9d34e022bbbe8734 327 Gene3D G3DSA:3.40.190.10 124 268 1.4E-28 T 11-11-2016 S40542_RS19655 8962796342082a7d9d34e022bbbe8734 327 SUPERFAMILY SSF53850 21 295 1.75E-50 T 11-11-2016 S40542_RS19655 8962796342082a7d9d34e022bbbe8734 327 Gene3D G3DSA:3.40.190.10 21 119 4.3E-26 T 11-11-2016 S40542_RS19655 8962796342082a7d9d34e022bbbe8734 327 Gene3D G3DSA:3.40.190.10 269 296 4.3E-26 T 11-11-2016 S40542_RS19655 8962796342082a7d9d34e022bbbe8734 327 Pfam PF13343 Bacterial extracellular solute-binding protein 76 299 1.2E-12 T 11-11-2016 S40542_RS10005 eafa55e22aa0fa8f03d1504b48a1d6fc 368 SMART SM00387 270 366 1.9E-4 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10005 eafa55e22aa0fa8f03d1504b48a1d6fc 368 Pfam PF06580 Histidine kinase 175 255 2.0E-24 T 11-11-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 S40542_RS10005 eafa55e22aa0fa8f03d1504b48a1d6fc 368 Gene3D G3DSA:3.30.565.10 212 232 1.7E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10005 eafa55e22aa0fa8f03d1504b48a1d6fc 368 Gene3D G3DSA:3.30.565.10 264 364 1.7E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10005 eafa55e22aa0fa8f03d1504b48a1d6fc 368 SUPERFAMILY SSF55874 242 363 4.58E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-20 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 Gene3D G3DSA:3.40.190.10 180 263 9.1E-15 T 11-11-2016 S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 Gene3D G3DSA:3.40.190.10 91 179 3.0E-23 T 11-11-2016 S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 Pfam PF03466 LysR substrate binding domain 87 295 7.2E-28 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 Gene3D G3DSA:1.10.10.10 4 80 9.8E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 SUPERFAMILY SSF46785 4 83 1.24E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08600 a4cc8d66278b2843ada6271fa0d6f3d7 298 SUPERFAMILY SSF53850 88 296 2.53E-31 T 11-11-2016 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SMART SM00073 791 888 4.2E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Gene3D G3DSA:3.40.50.2300 664 769 6.8E-33 T 11-11-2016 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SUPERFAMILY SSF158472 318 365 2.09E-8 T 11-11-2016 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Gene3D G3DSA:1.20.120.160 770 878 6.6E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Gene3D G3DSA:1.10.287.130 399 458 1.8E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Pfam PF00512 His Kinase A (phospho-acceptor) domain 409 472 1.2E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Pfam PF00072 Response regulator receiver domain 666 773 8.5E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 611 7.5E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 586 7.5E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 630 7.5E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 572 7.5E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SUPERFAMILY SSF52172 665 783 9.53E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 521 629 7.8E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SMART SM00387 520 633 9.9E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SUPERFAMILY SSF47384 394 474 8.04E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Pfam PF02743 Cache domain 38 259 7.5E-13 T 11-11-2016 IPR033479 Double Cache domain 1 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Pfam PF00672 HAMP domain 297 364 3.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SMART SM00304 316 368 1.3E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SUPERFAMILY SSF55874 462 629 1.31E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SUPERFAMILY SSF47226 789 882 4.97E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Gene3D G3DSA:3.30.565.10 459 631 1.2E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SUPERFAMILY SSF103190 39 123 2.12E-5 T 11-11-2016 IPR029151 Periplasmic sensor domain-like S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SMART SM00388 408 473 3.9E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 Pfam PF01627 Hpt domain 801 872 1.5E-13 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS02355 96f69066427ddd42534e1e3be3777402 892 SMART SM00448 664 775 5.8E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00075 dabb1073349ad3506449a7a302fc6ca9 225 Gene3D G3DSA:2.30.110.10 12 116 1.5E-24 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS00075 dabb1073349ad3506449a7a302fc6ca9 225 SUPERFAMILY SSF141371 119 217 1.71E-7 T 11-11-2016 S40542_RS00075 dabb1073349ad3506449a7a302fc6ca9 225 Pfam PF12945 Flagellar protein YcgR 19 107 5.9E-13 T 11-11-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal S40542_RS00075 dabb1073349ad3506449a7a302fc6ca9 225 SUPERFAMILY SSF141371 13 116 9.42E-24 T 11-11-2016 S40542_RS00075 dabb1073349ad3506449a7a302fc6ca9 225 Pfam PF07238 PilZ domain 116 216 8.8E-11 T 11-11-2016 IPR009875 PilZ domain GO:0035438 S40542_RS00075 dabb1073349ad3506449a7a302fc6ca9 225 Gene3D G3DSA:2.40.10.220 117 205 1.9E-6 T 11-11-2016 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 SUPERFAMILY SSF52172 7 192 1.99E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 SUPERFAMILY SSF46689 361 448 3.99E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 Gene3D G3DSA:3.40.50.2300 6 134 2.6E-31 T 11-11-2016 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 SUPERFAMILY SSF52540 149 389 1.18E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 SMART SM00448 5 121 5.9E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 Gene3D G3DSA:3.40.50.300 149 318 5.5E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 Gene3D G3DSA:1.10.10.60 396 448 1.1E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 Pfam PF00072 Response regulator receiver domain 7 121 3.8E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 Gene3D G3DSA:1.10.8.60 320 394 1.0E-21 T 11-11-2016 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 Pfam PF00158 Sigma-54 interaction domain 150 313 1.3E-64 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 414 431 3.5E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 451 3.5E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 Pfam PF02954 Bacterial regulatory protein, Fis family 407 448 4.1E-14 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS01110 eca6969d07ada10a2d58c3b4f8ca09f9 452 SMART SM00382 168 311 6.3E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS10025 16751f35bd0696681b1d7299b84c5976 418 Gene3D G3DSA:1.20.1250.20 26 218 5.4E-19 T 11-11-2016 S40542_RS10025 16751f35bd0696681b1d7299b84c5976 418 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 105 403 2.0E-110 T 11-11-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 S40542_RS10025 16751f35bd0696681b1d7299b84c5976 418 SUPERFAMILY SSF103473 18 408 7.06E-42 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS10025 16751f35bd0696681b1d7299b84c5976 418 Gene3D G3DSA:1.20.1250.20 226 415 9.7E-12 T 11-11-2016 S40542_RS10025 16751f35bd0696681b1d7299b84c5976 418 Pfam PF07690 Major Facilitator Superfamily 30 357 3.6E-20 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 SUPERFAMILY SSF52540 314 587 9.86E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 Gene3D G3DSA:3.40.50.300 309 499 6.2E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 5.8E-17 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 Gene3D G3DSA:1.10.8.60 500 584 2.6E-33 T 11-11-2016 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 SMART SM00464 10 202 2.0E-74 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 8.5E-56 T 11-11-2016 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 8.5E-56 T 11-11-2016 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 8.5E-56 T 11-11-2016 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 8.5E-56 T 11-11-2016 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 8.5E-56 T 11-11-2016 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 Hamap MF_01973 Lon protease [lon]. 11 772 71.143 T 11-11-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 11-11-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 Gene3D G3DSA:3.30.230.10 590 771 3.2E-77 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 SMART SM00382 348 492 6.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 SUPERFAMILY SSF54211 595 770 2.84E-59 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.3E-41 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 PIRSF PIRSF001174 1 774 0.0 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 SUPERFAMILY SSF88697 10 201 8.95E-50 T 11-11-2016 IPR015947 PUA-like domain S40542_RS16880 e08bdb4dc253731a80590531ffe04432 789 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 2.0E-96 T 11-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 Gene3D G3DSA:1.20.1640.10 290 489 2.0E-46 T 11-11-2016 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 SUPERFAMILY SSF82866 295 489 4.32E-38 T 11-11-2016 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 Gene3D G3DSA:3.30.2090.10 723 796 1.8E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 SUPERFAMILY SSF82866 797 1022 6.93E-46 T 11-11-2016 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 Gene3D G3DSA:1.10.3850.10 803 1021 1.7E-53 T 11-11-2016 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 Pfam PF00873 AcrB/AcrD/AcrF family 13 1020 7.0E-156 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 SUPERFAMILY SSF82714 186 268 2.35E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 SUPERFAMILY SSF82693 49 140 1.1E-14 T 11-11-2016 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 1.9E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 1.9E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 1.9E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.9E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 1.9E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.9E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 Gene3D G3DSA:3.30.2090.10 186 269 5.9E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 Gene3D G3DSA:3.30.70.1430 50 148 9.6E-17 T 11-11-2016 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 SUPERFAMILY SSF82714 723 796 1.57E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 SUPERFAMILY SSF82693 272 328 5.58E-10 T 11-11-2016 S40542_RS00400 94b16233ccca35ec0adc307550632e1f 1046 SUPERFAMILY SSF82693 151 186 5.58E-10 T 11-11-2016 S40542_RS00245 51b79f7c4f3bc1dd16340d457c3fcba6 465 SMART SM00487 20 221 3.1E-61 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS00245 51b79f7c4f3bc1dd16340d457c3fcba6 465 Pfam PF00271 Helicase conserved C-terminal domain 231 338 3.7E-29 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS00245 51b79f7c4f3bc1dd16340d457c3fcba6 465 Gene3D G3DSA:3.40.50.300 218 370 3.3E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00245 51b79f7c4f3bc1dd16340d457c3fcba6 465 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site S40542_RS00245 51b79f7c4f3bc1dd16340d457c3fcba6 465 Pfam PF00270 DEAD/DEAH box helicase 25 192 9.4E-50 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS00245 51b79f7c4f3bc1dd16340d457c3fcba6 465 SUPERFAMILY SSF52540 73 358 4.55E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00245 51b79f7c4f3bc1dd16340d457c3fcba6 465 SMART SM00490 257 338 4.3E-32 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS00245 51b79f7c4f3bc1dd16340d457c3fcba6 465 Gene3D G3DSA:3.40.50.300 1 217 1.6E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 SUPERFAMILY SSF52540 119 256 2.23E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 SUPERFAMILY SSF52540 2 92 2.23E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 Pfam PF00005 ABC transporter 17 178 1.9E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 Pfam PF00005 ABC transporter 328 459 3.0E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 SUPERFAMILY SSF52540 295 511 1.7E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 Pfam PF12848 ABC transporter 217 296 1.4E-28 T 11-11-2016 IPR032781 ABC-transporter extension domain S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 Gene3D G3DSA:3.40.50.300 3 275 7.0E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 SMART SM00382 337 504 3.8E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 SMART SM00382 26 223 1.2E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS00760 9b104b6490e5449e4f521774d0a911f1 640 Gene3D G3DSA:3.40.50.300 311 532 6.1E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 SUPERFAMILY SSF47446 298 431 1.08E-46 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 Pfam PF02978 Signal peptide binding domain 329 427 5.6E-34 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.1E-76 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.3E-21 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 SUPERFAMILY SSF52540 42 352 9.3E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 SMART SM00963 1 86 1.0E-34 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 Gene3D G3DSA:1.20.120.140 2 88 4.2E-35 T 11-11-2016 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.4E-180 T 11-11-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 SMART SM00962 100 296 2.1E-119 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 Gene3D G3DSA:3.40.50.300 94 297 6.4E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 SMART SM00382 99 247 8.7E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 Gene3D G3DSA:1.10.260.30 329 431 2.9E-41 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 S40542_RS15840 f72bdd56db2af114803c47611907e9ec 459 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 34.728 T 11-11-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 2.2E-158 T 11-11-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 81.324 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 SMART SM00116 96 144 7.1E-5 T 11-11-2016 IPR000644 CBS domain S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 SMART SM00116 158 206 4.7E-7 T 11-11-2016 IPR000644 CBS domain S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 PIRSF PIRSF000130 1 489 4.0E-194 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 11-11-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 455 1.1E-184 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 Gene3D G3DSA:3.20.20.70 2 487 1.1E-191 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 SMART SM01240 7 475 0.0 T 11-11-2016 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 SUPERFAMILY SSF51412 217 479 8.77E-122 T 11-11-2016 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 SUPERFAMILY SSF51412 1 90 8.77E-122 T 11-11-2016 S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 Pfam PF00571 CBS domain 95 139 2.0E-7 T 11-11-2016 IPR000644 CBS domain S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 Pfam PF00571 CBS domain 149 200 1.7E-5 T 11-11-2016 IPR000644 CBS domain S40542_RS02330 762a728a8125b1f6215465ed418a9f6d 489 SUPERFAMILY SSF54631 97 202 4.55E-25 T 11-11-2016 S40542_RS01060 f8028f91e403e055f2ff27451205492d 411 Pfam PF00266 Aminotransferase class-V 23 402 9.4E-69 T 11-11-2016 IPR000192 Aminotransferase class V domain S40542_RS01060 f8028f91e403e055f2ff27451205492d 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 5 405 1.6E-151 T 11-11-2016 IPR011340 Cysteine desulfurase-related S40542_RS01060 f8028f91e403e055f2ff27451205492d 411 SUPERFAMILY SSF53383 5 410 3.63E-90 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS01060 f8028f91e403e055f2ff27451205492d 411 Gene3D G3DSA:3.40.640.10 34 266 1.5E-62 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS01060 f8028f91e403e055f2ff27451205492d 411 Gene3D G3DSA:3.90.1150.10 267 410 9.6E-34 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 Gene3D G3DSA:1.10.10.250 73 141 1.4E-31 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.2E-24 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 4.0E-16 T 11-11-2016 S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 SMART SM00649 9 141 3.4E-84 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 Gene3D G3DSA:3.30.1550.10 2 72 2.8E-37 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.0E-29 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 SUPERFAMILY SSF46906 68 141 1.06E-25 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.403 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 9.0E-64 T 11-11-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19555 8fbf8d94dbb60d21904118c804385a98 142 SUPERFAMILY SSF54747 3 73 1.31E-29 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 Gene3D G3DSA:3.30.70.240 402 479 4.3E-32 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 SUPERFAMILY SSF52540 3 208 1.08E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 Pfam PF03144 Elongation factor Tu domain 2 220 290 1.1E-10 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 SUPERFAMILY SSF54980 399 513 4.8E-27 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 Gene3D G3DSA:2.40.30.10 207 304 1.0E-26 T 11-11-2016 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 600 2.7E-292 T 11-11-2016 IPR006298 GTP-binding protein TypA GO:0005525 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 SUPERFAMILY SSF54980 303 388 1.73E-14 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 Pfam PF00679 Elongation factor G C-terminus 397 477 1.2E-21 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 Gene3D G3DSA:3.40.50.300 4 206 5.0E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 SUPERFAMILY SSF50447 152 300 8.32E-34 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 151 8.7E-25 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 Gene3D G3DSA:2.40.50.250 484 578 5.4E-40 T 11-11-2016 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 Gene3D G3DSA:3.30.70.870 305 401 1.5E-37 T 11-11-2016 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 8.5E-57 T 11-11-2016 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 PRINTS PR00315 GTP-binding elongation factor signature 88 99 2.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 PRINTS PR00315 GTP-binding elongation factor signature 8 21 2.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 PRINTS PR00315 GTP-binding elongation factor signature 72 82 2.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS01115 d680f01adea93efdfa6127a83e5cf76d 606 PRINTS PR00315 GTP-binding elongation factor signature 124 133 2.4E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SUPERFAMILY SSF47384 692 772 1.96E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00388 697 781 4.5E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SUPERFAMILY SSF48452 164 280 2.28E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Gene3D G3DSA:1.25.40.10 61 174 6.9E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00387 820 931 4.3E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Pfam PF13424 Tetratricopeptide repeat 247 316 5.9E-13 T 11-11-2016 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Pfam PF13181 Tetratricopeptide repeat 328 352 0.017 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00028 325 358 32.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00028 85 118 130.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00028 245 278 0.35 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00028 165 198 26.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00028 205 238 55.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00028 365 398 0.5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00028 285 318 0.027 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SUPERFAMILY SSF55874 802 929 6.81E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Pfam PF08447 PAS fold 563 637 1.9E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Gene3D G3DSA:3.30.450.20 517 667 1.2E-24 T 11-11-2016 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SMART SM00086 600 643 3.4E-6 T 11-11-2016 IPR001610 PAC motif S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Gene3D G3DSA:1.25.40.10 175 279 7.8E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Gene3D G3DSA:1.25.40.10 285 434 2.0E-27 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Pfam PF00512 His Kinase A (phospho-acceptor) domain 697 773 1.6E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 574 648 2.8E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 890 908 1.4E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 859 873 1.4E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 915 928 1.4E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 887 1.4E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Gene3D G3DSA:3.30.565.10 765 932 2.1E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SUPERFAMILY SSF48452 60 160 1.73E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SUPERFAMILY SSF55785 539 644 9.9E-13 T 11-11-2016 IPR000014 PAS domain S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Gene3D G3DSA:1.10.287.130 693 764 2.0E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 SUPERFAMILY SSF48452 284 428 4.43E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07220 75eba5dcb2244e1baee07d00239c923c 935 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 821 928 4.3E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 SMART SM00089 674 752 1.3E-15 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 Pfam PF00801 PKD domain 682 740 2.8E-10 T 11-11-2016 IPR000601 PKD domain S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 161 172 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 Pfam PF00082 Subtilase family 157 421 6.7E-44 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 Gene3D G3DSA:3.40.50.200 106 440 2.1E-90 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 SUPERFAMILY SSF54897 35 115 3.74E-6 T 11-11-2016 IPR009020 Proteinase propeptide inhibitor S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 Gene3D G3DSA:2.60.120.260 585 664 1.1E-17 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 Gene3D G3DSA:2.60.40.670 671 752 9.7E-21 T 11-11-2016 IPR000601 PKD domain S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 220 230 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 Gene3D G3DSA:3.30.70.80 30 105 1.8E-9 T 11-11-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 Pfam PF01483 Proprotein convertase P-domain 586 662 8.4E-21 T 11-11-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 SUPERFAMILY SSF49785 550 665 6.52E-25 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 383 393 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 SUPERFAMILY SSF52743 98 427 2.49E-76 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 PRINTS PR00723 Subtilisin serine protease family (S8) signature 156 175 5.4E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 PRINTS PR00723 Subtilisin serine protease family (S8) signature 216 229 5.4E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 PRINTS PR00723 Subtilisin serine protease family (S8) signature 382 398 5.4E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS03945 a309cab9c112cee9f47acbd549c31c1c 833 SUPERFAMILY SSF49299 670 751 1.12E-20 T 11-11-2016 IPR000601 PKD domain S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 SMART SM00448 476 587 2.7E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 Gene3D G3DSA:1.10.287.130 218 285 4.0E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 288 5.8E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 Gene3D G3DSA:3.40.50.2300 476 591 4.9E-33 T 11-11-2016 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 SMART SM00387 337 452 2.7E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 SUPERFAMILY SSF55874 278 451 4.71E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 SUPERFAMILY SSF52172 476 591 3.56E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 8.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 8.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 8.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 8.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 451 2.2E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 Pfam PF00072 Response regulator receiver domain 478 582 7.9E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 SUPERFAMILY SSF47384 215 290 4.71E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 Gene3D G3DSA:3.30.565.10 290 456 1.3E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10630 5011a5ff1afa3db26794d40ef130d960 592 SMART SM00388 224 289 1.6E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13150 5bc96395c24d0da7e181c560a1c24c12 302 SUPERFAMILY SSF143422 13 53 7.77E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS13150 5bc96395c24d0da7e181c560a1c24c12 302 SUPERFAMILY SSF143422 106 165 7.77E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS13150 5bc96395c24d0da7e181c560a1c24c12 302 Gene3D G3DSA:3.30.70.1290 19 54 7.8E-6 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS13150 5bc96395c24d0da7e181c560a1c24c12 302 Gene3D G3DSA:3.30.70.1290 107 161 7.8E-6 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06365 802d50173125b594ef3354e426417a10 111 Pfam PF02049 Flagellar hook-basal body complex protein FliE 30 111 8.1E-27 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 S40542_RS06365 802d50173125b594ef3354e426417a10 111 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 6 110 5.7E-18 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 S40542_RS06365 802d50173125b594ef3354e426417a10 111 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 111 15.661 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 S40542_RS06365 802d50173125b594ef3354e426417a10 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 40 56 7.5E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 S40542_RS06365 802d50173125b594ef3354e426417a10 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 96 109 7.5E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 S40542_RS06365 802d50173125b594ef3354e426417a10 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 75 91 7.5E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 S40542_RS00040 f80089b0423acf5e53bfb209bcbeeab9 79 Pfam PF01206 Sulfurtransferase TusA 8 77 1.0E-22 T 11-11-2016 IPR001455 TusA-like domain S40542_RS00040 f80089b0423acf5e53bfb209bcbeeab9 79 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 1 79 27.973 T 11-11-2016 IPR022931 Sulphurtransferase TusA GO:0016783 S40542_RS00040 f80089b0423acf5e53bfb209bcbeeab9 79 SUPERFAMILY SSF64307 5 77 1.83E-24 T 11-11-2016 IPR001455 TusA-like domain S40542_RS00040 f80089b0423acf5e53bfb209bcbeeab9 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 11-11-2016 IPR001455 TusA-like domain S40542_RS00040 f80089b0423acf5e53bfb209bcbeeab9 79 Gene3D G3DSA:3.30.110.40 5 78 2.2E-27 T 11-11-2016 IPR001455 TusA-like domain S40542_RS06230 593fc590d0ab68b56f843509e45245d0 359 Pfam PF04055 Radical SAM superfamily 29 154 7.8E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS06230 593fc590d0ab68b56f843509e45245d0 359 Gene3D G3DSA:3.20.20.70 23 343 1.8E-40 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS06230 593fc590d0ab68b56f843509e45245d0 359 Pfam PF13394 4Fe-4S single cluster domain 27 126 5.6E-8 T 11-11-2016 S40542_RS06230 593fc590d0ab68b56f843509e45245d0 359 Pfam PF13186 Iron-sulfur cluster-binding domain 283 341 1.0E-10 T 11-11-2016 IPR023885 4Fe4S-binding SPASM domain S40542_RS06230 593fc590d0ab68b56f843509e45245d0 359 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 30 41 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 S40542_RS06230 593fc590d0ab68b56f843509e45245d0 359 SUPERFAMILY SSF102114 23 343 1.83E-35 T 11-11-2016 S40542_RS05040 7c1be23848ec9b32651f02abfa843798 351 Gene3D G3DSA:3.40.50.10210 73 329 2.5E-102 T 11-11-2016 S40542_RS05040 7c1be23848ec9b32651f02abfa843798 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 10 346 4.0E-124 T 11-11-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS05040 7c1be23848ec9b32651f02abfa843798 351 SUPERFAMILY SSF52733 2 347 7.19E-109 T 11-11-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS05040 7c1be23848ec9b32651f02abfa843798 351 Gene3D G3DSA:1.10.1610.10 2 72 1.7E-23 T 11-11-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS05040 7c1be23848ec9b32651f02abfa843798 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 4 348 34.035 T 11-11-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS05040 7c1be23848ec9b32651f02abfa843798 351 Pfam PF02277 Phosphoribosyltransferase 2 346 1.5E-121 T 11-11-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS00520 63d8e9e750d5bd9fd32a6f0510a5b46b 335 Gene3D G3DSA:1.10.730.10 85 171 1.3E-4 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS00520 63d8e9e750d5bd9fd32a6f0510a5b46b 335 Gene3D G3DSA:3.30.70.270 176 330 9.0E-24 T 11-11-2016 S40542_RS00520 63d8e9e750d5bd9fd32a6f0510a5b46b 335 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 172 329 5.5E-18 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00520 63d8e9e750d5bd9fd32a6f0510a5b46b 335 SUPERFAMILY SSF55073 180 331 4.32E-21 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS00520 63d8e9e750d5bd9fd32a6f0510a5b46b 335 Pfam PF00990 Diguanylate cyclase, GGDEF domain 176 328 1.6E-20 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00520 63d8e9e750d5bd9fd32a6f0510a5b46b 335 SMART SM00267 163 333 4.1E-16 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 29.128 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 Gene3D G3DSA:1.20.1640.10 123 292 1.9E-29 T 11-11-2016 S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 104 280 2.0E-55 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 8.1E-85 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 Pfam PF02355 Protein export membrane protein 108 291 1.0E-67 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 Pfam PF07549 SecD/SecF GG Motif 33 59 1.9E-10 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 3.3E-33 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 3.3E-33 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 3.3E-33 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 3.3E-33 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial S40542_RS18140 483dc5a77fd079518fb5de2b152d3039 313 SUPERFAMILY SSF82866 75 290 6.15E-41 T 11-11-2016 S40542_RS07980 ce24d82c515525cf79abcfea8ef31637 287 Pfam PF00892 EamA-like transporter family 138 276 1.7E-9 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS07980 ce24d82c515525cf79abcfea8ef31637 287 SUPERFAMILY SSF103481 186 277 4.45E-6 T 11-11-2016 S40542_RS07980 ce24d82c515525cf79abcfea8ef31637 287 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 4.4E-70 T 11-11-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 SMART SM00089 661 738 0.62 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 SMART SM00089 576 655 0.57 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 Gene3D G3DSA:2.60.40.670 660 739 1.3E-6 T 11-11-2016 IPR000601 PKD domain S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 Gene3D G3DSA:2.60.40.670 572 644 4.2E-6 T 11-11-2016 IPR000601 PKD domain S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 SMART SM00631 127 428 2.3E-45 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 SUPERFAMILY SSF49299 572 648 6.41E-8 T 11-11-2016 IPR000601 PKD domain S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 Gene3D G3DSA:3.40.630.10 122 437 9.0E-69 T 11-11-2016 S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 SUPERFAMILY SSF53187 117 415 4.63E-61 T 11-11-2016 S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 Pfam PF00246 Zinc carboxypeptidase 135 409 1.1E-52 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS07380 ef8758d4c767d748a61fa593abb0e2f1 740 SUPERFAMILY SSF49299 659 739 1.57E-8 T 11-11-2016 IPR000601 PKD domain S40542_RS09720 7d91e65a090b57a1c7c88f2799c65f05 461 Gene3D G3DSA:2.30.40.10 384 445 1.3E-19 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09720 7d91e65a090b57a1c7c88f2799c65f05 461 Gene3D G3DSA:2.30.40.10 311 348 1.3E-19 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09720 7d91e65a090b57a1c7c88f2799c65f05 461 Gene3D G3DSA:2.30.40.10 38 160 2.2E-33 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09720 7d91e65a090b57a1c7c88f2799c65f05 461 SUPERFAMILY SSF51338 31 102 4.5E-27 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09720 7d91e65a090b57a1c7c88f2799c65f05 461 SUPERFAMILY SSF51338 408 445 4.5E-27 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09720 7d91e65a090b57a1c7c88f2799c65f05 461 SUPERFAMILY SSF51556 101 409 3.11E-25 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS09720 7d91e65a090b57a1c7c88f2799c65f05 461 Pfam PF01979 Amidohydrolase family 363 435 7.4E-11 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 SMART SM00388 276 340 3.0E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 SUPERFAMILY SSF158472 223 272 3.66E-7 T 11-11-2016 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 500 4.5E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 SUPERFAMILY SSF55874 329 499 9.95E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 5.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 479 5.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 454 5.7E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 SMART SM00387 385 501 5.6E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 Pfam PF00512 His Kinase A (phospho-acceptor) domain 276 339 1.9E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 Pfam PF00672 HAMP domain 204 270 2.9E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 Gene3D G3DSA:1.10.287.130 271 325 1.1E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 SUPERFAMILY SSF47384 259 340 1.96E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 SMART SM00304 223 275 7.4E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS08760 3177c21551dbeb39e5910077eb3061d8 501 Gene3D G3DSA:3.30.565.10 326 500 9.7E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00950 2d6a19843e62586b4bcaac75228b1a46 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 116 1.4E-39 T 11-11-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00950 2d6a19843e62586b4bcaac75228b1a46 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 116 24.921 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS00950 2d6a19843e62586b4bcaac75228b1a46 116 SUPERFAMILY SSF53137 3 114 1.48E-47 T 11-11-2016 S40542_RS00950 2d6a19843e62586b4bcaac75228b1a46 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 116 1.5E-39 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS00950 2d6a19843e62586b4bcaac75228b1a46 116 Gene3D G3DSA:3.30.420.100 23 116 4.6E-34 T 11-11-2016 S40542_RS04250 2b53cc004a475d279877d73e25d72326 84 SUPERFAMILY SSF89957 1 79 1.28E-22 T 11-11-2016 IPR029756 MTH1187/YkoF-like S40542_RS04250 2b53cc004a475d279877d73e25d72326 84 Pfam PF07615 YKOF-related Family 5 76 2.7E-6 T 11-11-2016 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative S40542_RS04250 2b53cc004a475d279877d73e25d72326 84 Gene3D G3DSA:3.30.70.930 2 76 7.5E-10 T 11-11-2016 IPR029756 MTH1187/YkoF-like S40542_RS17935 01ce0c273ebe7f43d53abfd45854bea7 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.441 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 S40542_RS17935 01ce0c273ebe7f43d53abfd45854bea7 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 7.4E-62 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 S40542_RS17935 01ce0c273ebe7f43d53abfd45854bea7 154 PIRSF PIRSF029256 1 154 2.1E-66 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 S40542_RS17935 01ce0c273ebe7f43d53abfd45854bea7 154 Gene3D G3DSA:3.40.1280.10 1 153 3.9E-65 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS17935 01ce0c273ebe7f43d53abfd45854bea7 154 SUPERFAMILY SSF75217 2 152 3.07E-43 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS17935 01ce0c273ebe7f43d53abfd45854bea7 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 8.2E-34 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 S40542_RS07865 36060c8300bed8584593b9e9d89773f3 167 Pfam PF13302 Acetyltransferase (GNAT) domain 11 145 1.2E-20 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS07865 36060c8300bed8584593b9e9d89773f3 167 Gene3D G3DSA:3.40.630.30 3 162 3.7E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS07865 36060c8300bed8584593b9e9d89773f3 167 SUPERFAMILY SSF55729 1 164 1.03E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 PIRSF PIRSF006092 1 158 8.1E-53 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 SUPERFAMILY SSF54534 81 157 1.57E-25 T 11-11-2016 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 4.1E-30 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 8.7E-59 T 11-11-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.0E-29 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.619 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 SUPERFAMILY SSF46557 3 78 1.7E-27 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 Gene3D G3DSA:1.10.287.180 1 75 4.4E-33 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 S40542_RS09150 57223281c2bd354bae839d2b9423ae0c 158 Gene3D G3DSA:3.10.50.30 80 157 1.9E-32 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 S40542_RS06995 b78a4c1654e478f9d6d254a9d4e7ee2b 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 61 217 7.4E-7 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS06995 b78a4c1654e478f9d6d254a9d4e7ee2b 251 SUPERFAMILY SSF53850 24 221 2.06E-18 T 11-11-2016 S40542_RS06995 b78a4c1654e478f9d6d254a9d4e7ee2b 251 Gene3D G3DSA:3.40.190.10 125 195 6.7E-5 T 11-11-2016 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 Gene3D G3DSA:3.30.450.20 780 950 7.6E-14 T 11-11-2016 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 Gene3D G3DSA:2.120.10.30 516 614 1.7E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 Gene3D G3DSA:2.120.10.30 254 312 1.4E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 SUPERFAMILY SSF69322 393 619 1.44E-10 T 11-11-2016 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1162 1180 4.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1187 1200 4.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1149 1159 4.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1131 1145 4.1E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 SUPERFAMILY SSF63829 219 304 5.43E-9 T 11-11-2016 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 SUPERFAMILY SSF63829 33 184 5.43E-9 T 11-11-2016 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 Gene3D G3DSA:3.30.565.10 1053 1201 1.6E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 SUPERFAMILY SSF55785 838 912 5.23E-7 T 11-11-2016 IPR000014 PAS domain S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 SUPERFAMILY SSF55874 1052 1201 6.29E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 Pfam PF07494 Two component regulator propeller 287 309 0.005 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 Pfam PF07494 Two component regulator propeller 550 573 0.0073 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 SUPERFAMILY SSF63829 255 465 3.01E-11 T 11-11-2016 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 Pfam PF08447 PAS fold 837 903 7.2E-9 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1093 1201 1.4E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 SUPERFAMILY SSF47384 961 1037 6.67E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12200 3e532aa0546012e7d09bfaa0001147f8 1208 SMART SM00387 1091 1203 1.1E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09455 0e6ba4e70d2171944ff7fd432dc995f5 270 Gene3D G3DSA:3.10.310.10 12 134 3.2E-22 T 11-11-2016 S40542_RS09455 0e6ba4e70d2171944ff7fd432dc995f5 270 Pfam PF02567 Phenazine biosynthesis-like protein 15 236 6.6E-26 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 S40542_RS09455 0e6ba4e70d2171944ff7fd432dc995f5 270 SUPERFAMILY SSF54506 14 234 1.48E-31 T 11-11-2016 S40542_RS09455 0e6ba4e70d2171944ff7fd432dc995f5 270 Gene3D G3DSA:3.10.310.10 159 251 1.7E-9 T 11-11-2016 S40542_RS09455 0e6ba4e70d2171944ff7fd432dc995f5 270 PIRSF PIRSF016184 7 236 1.2E-22 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 S40542_RS18945 b3cd20ffcd1dc56082ecc65c16163c01 362 ProSitePatterns PS00414 Profilin signature. 1 9 - T 11-11-2016 IPR027310 Profilin conserved site GO:0003779 Reactome: R-HSA-376176|Reactome: R-HSA-5663220 S40542_RS18945 b3cd20ffcd1dc56082ecc65c16163c01 362 SUPERFAMILY SSF52540 21 180 3.69E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18945 b3cd20ffcd1dc56082ecc65c16163c01 362 Gene3D G3DSA:3.40.50.300 4 172 2.1E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18945 b3cd20ffcd1dc56082ecc65c16163c01 362 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 362 53.073 T 11-11-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 S40542_RS18945 b3cd20ffcd1dc56082ecc65c16163c01 362 Pfam PF03969 AFG1-like ATPase 1 359 4.9E-151 T 11-11-2016 IPR005654 ATPase, AFG1-like GO:0005524 S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 SMART SM00387 249 362 9.8E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 Gene3D G3DSA:3.40.50.2300 7 133 4.8E-29 T 11-11-2016 S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 2.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 337 2.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 314 2.4E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 SMART SM00448 6 120 6.8E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 SUPERFAMILY SSF52172 6 155 3.42E-28 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 Gene3D G3DSA:3.30.565.10 213 352 4.1E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 Gene3D G3DSA:1.10.287.130 134 203 6.2E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 252 357 1.6E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 SUPERFAMILY SSF55874 212 344 2.36E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 Pfam PF00072 Response regulator receiver domain 8 110 3.4E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07810 bbbb7ed22640f23215b6f43d954e62f1 366 SUPERFAMILY SSF47384 128 207 2.35E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Gene3D G3DSA:1.10.287.560 313 374 1.1E-13 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Gene3D G3DSA:3.30.565.10 375 558 1.2E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 SUPERFAMILY SSF47226 5 118 6.15E-23 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Gene3D G3DSA:2.30.30.40 646 690 9.3E-20 T 11-11-2016 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Gene3D G3DSA:2.30.30.40 559 580 9.3E-20 T 11-11-2016 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 313 372 3.8E-9 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 558 1.1E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Gene3D G3DSA:2.40.50.180 594 645 5.1E-12 T 11-11-2016 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Pfam PF01584 CheW-like domain 564 692 7.5E-25 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Gene3D G3DSA:1.20.120.160 3 124 1.0E-30 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 Pfam PF01627 Hpt domain 9 96 5.0E-15 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 SUPERFAMILY SSF55874 375 557 1.26E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 SUPERFAMILY SSF50341 558 690 2.09E-30 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 SMART SM01231 313 373 7.4E-12 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 SUPERFAMILY SSF47384 314 374 1.77E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 SMART SM00073 5 105 5.9E-24 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 SMART SM00387 418 559 1.8E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 513 4.5E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 556 4.5E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 4.5E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 537 4.5E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09320 49b9296bfd7e80d060a895d7b6073fd5 704 SMART SM00260 551 690 1.3E-27 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS13500 3b678cf1f19f55abf99e4f3f559a86b2 359 Pfam PF13487 HD domain 229 299 7.7E-21 T 11-11-2016 S40542_RS13500 3b678cf1f19f55abf99e4f3f559a86b2 359 SMART SM00471 166 317 1.8E-7 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS13500 3b678cf1f19f55abf99e4f3f559a86b2 359 SMART SM00448 5 117 3.9E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13500 3b678cf1f19f55abf99e4f3f559a86b2 359 Pfam PF00072 Response regulator receiver domain 7 117 6.3E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13500 3b678cf1f19f55abf99e4f3f559a86b2 359 Gene3D G3DSA:3.40.50.2300 4 129 3.8E-38 T 11-11-2016 S40542_RS13500 3b678cf1f19f55abf99e4f3f559a86b2 359 SUPERFAMILY SSF52172 6 157 1.85E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS13500 3b678cf1f19f55abf99e4f3f559a86b2 359 Gene3D G3DSA:1.10.3210.10 162 347 8.8E-21 T 11-11-2016 IPR006674 HD domain S40542_RS13500 3b678cf1f19f55abf99e4f3f559a86b2 359 SUPERFAMILY SSF109604 147 344 2.98E-34 T 11-11-2016 S40542_RS19090 5e9474da397c7048b87e038dc53285ec 192 Pfam PF02545 Maf-like protein 4 185 8.6E-55 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 S40542_RS19090 5e9474da397c7048b87e038dc53285ec 192 PIRSF PIRSF006305 1 190 1.0E-48 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 S40542_RS19090 5e9474da397c7048b87e038dc53285ec 192 Gene3D G3DSA:3.90.950.10 3 186 6.5E-65 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS19090 5e9474da397c7048b87e038dc53285ec 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 182 3.6E-55 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 S40542_RS19090 5e9474da397c7048b87e038dc53285ec 192 SUPERFAMILY SSF52972 3 184 9.16E-59 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS19090 5e9474da397c7048b87e038dc53285ec 192 Hamap MF_00528 Septum formation protein Maf [maf]. 4 190 30.554 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 S40542_RS06490 6e23643ee5362cdeacf0bc70511ae464 165 Gene3D G3DSA:2.40.50.180 60 94 7.5E-9 T 11-11-2016 S40542_RS06490 6e23643ee5362cdeacf0bc70511ae464 165 Pfam PF01584 CheW-like domain 21 157 6.7E-39 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS06490 6e23643ee5362cdeacf0bc70511ae464 165 Gene3D G3DSA:2.30.30.40 95 147 4.4E-7 T 11-11-2016 S40542_RS06490 6e23643ee5362cdeacf0bc70511ae464 165 SUPERFAMILY SSF50341 15 159 4.05E-40 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS06490 6e23643ee5362cdeacf0bc70511ae464 165 SMART SM00260 17 154 2.9E-48 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS08235 5aade445861f59cb8a87145df92ba401 359 Pfam PF13458 Periplasmic binding protein 2 318 5.2E-13 T 11-11-2016 IPR028081 Leucine-binding protein domain S40542_RS08235 5aade445861f59cb8a87145df92ba401 359 SUPERFAMILY SSF53822 2 310 1.48E-26 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS08235 5aade445861f59cb8a87145df92ba401 359 Gene3D G3DSA:3.40.50.2300 3 176 3.0E-15 T 11-11-2016 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SUPERFAMILY SSF52172 528 647 2.56E-10 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Gene3D G3DSA:1.20.120.160 821 909 4.8E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SUPERFAMILY SSF52172 667 793 9.11E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SMART SM00448 668 781 5.6E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SMART SM00073 818 915 0.0051 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SUPERFAMILY SSF47226 764 777 2.62E-21 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SUPERFAMILY SSF47226 809 909 2.62E-21 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Gene3D G3DSA:3.40.50.2300 529 646 1.6E-7 T 11-11-2016 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 171 2.5E-26 T 11-11-2016 IPR019247 Histidine kinase BarA, N-terminal S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SMART SM00387 399 515 1.1E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Pfam PF00072 Response regulator receiver domain 670 781 1.4E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Gene3D G3DSA:1.10.287.130 280 348 2.0E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 3.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 468 3.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 512 3.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 3.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Gene3D G3DSA:3.30.565.10 353 510 2.2E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 352 2.8E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SUPERFAMILY SSF55874 341 509 7.47E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Pfam PF01627 Hpt domain 829 911 4.0E-11 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SMART SM00388 287 352 2.5E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 399 511 8.7E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 Gene3D G3DSA:3.40.50.2300 667 798 1.7E-35 T 11-11-2016 S40542_RS16795 1e6da677261fe150d876129ff3bdd057 922 SUPERFAMILY SSF47384 272 352 1.63E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 362 378 6.5E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 88 107 6.5E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 133 146 6.5E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 Pfam PF00082 Subtilase family 88 402 1.2E-35 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 SUPERFAMILY SSF49785 601 613 4.68E-23 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 SUPERFAMILY SSF49785 467 566 4.68E-23 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 Pfam PF01483 Proprotein convertase P-domain 491 564 4.4E-18 T 11-11-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 137 147 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 93 104 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 Gene3D G3DSA:3.40.50.200 47 446 4.4E-63 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 Gene3D G3DSA:2.60.120.260 479 561 1.9E-26 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 Gene3D G3DSA:2.60.120.260 596 613 1.9E-26 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS08835 987b400a9adc5ec69dfab331f2a06f60 613 SUPERFAMILY SSF52743 48 446 1.28E-55 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 SUPERFAMILY SSF53738 244 359 2.59E-6 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 SUPERFAMILY SSF55957 405 466 3.14E-10 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 SUPERFAMILY SSF53738 158 258 2.51E-13 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 SUPERFAMILY SSF53738 11 136 5.49E-31 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 134 2.0E-26 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 Gene3D G3DSA:3.40.120.10 184 250 3.4E-4 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 418 453 3.9E-5 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 256 1.1E-9 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 374 2.0E-8 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 Gene3D G3DSA:3.40.120.10 11 139 2.1E-29 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS18600 20c851cbc1523d2a3864dac4ddcf3f54 471 Gene3D G3DSA:3.30.310.50 402 465 6.3E-11 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS09395 8e9ba753d1c79d7e68fc5734ab5e1db3 72 SMART SM00316 4 72 4.0E-7 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS09395 8e9ba753d1c79d7e68fc5734ab5e1db3 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.0E-38 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 S40542_RS09395 8e9ba753d1c79d7e68fc5734ab5e1db3 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.6E-28 T 11-11-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 S40542_RS09395 8e9ba753d1c79d7e68fc5734ab5e1db3 72 Gene3D G3DSA:2.40.50.140 1 71 1.7E-39 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09395 8e9ba753d1c79d7e68fc5734ab5e1db3 72 SUPERFAMILY SSF50249 1 70 6.34E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09395 8e9ba753d1c79d7e68fc5734ab5e1db3 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.695 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 SUPERFAMILY SSF49503 111 312 1.0E-52 T 11-11-2016 IPR008972 Cupredoxin S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 26 104 1.6E-12 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 Gene3D G3DSA:2.60.40.420 111 292 6.2E-57 T 11-11-2016 IPR008972 Cupredoxin S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 Gene3D G3DSA:1.10.287.90 24 110 3.2E-25 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 SUPERFAMILY SSF81464 23 113 4.91E-25 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 187 235 - T 11-11-2016 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 PRINTS PR01166 Cytochrome c oxidase subunit II signature 81 93 1.5E-38 T 11-11-2016 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 PRINTS PR01166 Cytochrome c oxidase subunit II signature 162 183 1.5E-38 T 11-11-2016 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 PRINTS PR01166 Cytochrome c oxidase subunit II signature 115 134 1.5E-38 T 11-11-2016 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 223 1.5E-38 T 11-11-2016 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 113 1.5E-38 T 11-11-2016 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 PRINTS PR01166 Cytochrome c oxidase subunit II signature 224 241 1.5E-38 T 11-11-2016 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 PRINTS PR01166 Cytochrome c oxidase subunit II signature 186 206 1.5E-38 T 11-11-2016 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 SUPERFAMILY SSF46626 263 367 1.43E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 278 352 5.6E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 34 251 2.8E-55 T 11-11-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 Gene3D G3DSA:1.10.760.10 293 379 7.0E-23 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01905 30252962f3ca8d53ce0ba87c7a3232d1 381 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 119 241 1.2E-36 T 11-11-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS07295 692b0c7c470b5256b57ac122bab0ec5f 240 Pfam PF00005 ABC transporter 18 159 3.8E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS07295 692b0c7c470b5256b57ac122bab0ec5f 240 SMART SM00382 26 207 1.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS07295 692b0c7c470b5256b57ac122bab0ec5f 240 SUPERFAMILY SSF52540 2 216 2.76E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07295 692b0c7c470b5256b57ac122bab0ec5f 240 Gene3D G3DSA:3.40.50.300 2 217 2.3E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04065 5a39dd781565cd308ce3fc7151f94843 374 SUPERFAMILY SSF54862 175 320 3.89E-18 T 11-11-2016 S40542_RS04065 5a39dd781565cd308ce3fc7151f94843 374 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 6 315 51.446 T 11-11-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 S40542_RS04065 5a39dd781565cd308ce3fc7151f94843 374 Gene3D G3DSA:3.30.70.20 190 257 1.5E-7 T 11-11-2016 S40542_RS04065 5a39dd781565cd308ce3fc7151f94843 374 Pfam PF08331 Domain of unknown function (DUF1730) 61 139 4.2E-26 T 11-11-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 S40542_RS04065 5a39dd781565cd308ce3fc7151f94843 374 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS04065 5a39dd781565cd308ce3fc7151f94843 374 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 13 349 1.8E-155 T 11-11-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 S40542_RS04065 5a39dd781565cd308ce3fc7151f94843 374 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 6.4E-21 T 11-11-2016 S40542_RS14270 75271bc804ea65b90412e325c71b409a 298 Gene3D G3DSA:3.40.50.720 1 198 2.5E-21 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14270 75271bc804ea65b90412e325c71b409a 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 1.3E-106 T 11-11-2016 IPR010099 Epimerase family protein SDR39U1 S40542_RS14270 75271bc804ea65b90412e325c71b409a 298 SUPERFAMILY SSF51735 1 297 4.23E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14270 75271bc804ea65b90412e325c71b409a 298 Pfam PF08338 Domain of unknown function (DUF1731) 251 296 9.3E-17 T 11-11-2016 IPR013549 Domain of unknown function DUF1731 S40542_RS14270 75271bc804ea65b90412e325c71b409a 298 Gene3D G3DSA:3.90.25.10 199 246 1.8E-6 T 11-11-2016 S40542_RS14270 75271bc804ea65b90412e325c71b409a 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 1.3E-19 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 S40542_RS14765 735b0233eee5580035774384bd87f9a3 640 PIRSF PIRSF000549 1 640 9.2E-287 T 11-11-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 S40542_RS14765 735b0233eee5580035774384bd87f9a3 640 Pfam PF08298 PrkA AAA domain 20 376 1.7E-173 T 11-11-2016 IPR013153 PrkA AAA domain S40542_RS14765 735b0233eee5580035774384bd87f9a3 640 SMART SM00763 19 376 1.6E-209 T 11-11-2016 IPR013153 PrkA AAA domain S40542_RS14765 735b0233eee5580035774384bd87f9a3 640 SUPERFAMILY SSF52540 75 363 6.6E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14765 735b0233eee5580035774384bd87f9a3 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 9.4E-73 T 11-11-2016 IPR010650 PrkA C-terminal domain S40542_RS14765 735b0233eee5580035774384bd87f9a3 640 Gene3D G3DSA:3.40.50.300 239 326 1.7E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14765 735b0233eee5580035774384bd87f9a3 640 Gene3D G3DSA:3.40.50.300 75 166 1.7E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS10965 087071233d1b4ff7021083d22d5ca0f6 303 SUPERFAMILY SSF53850 93 294 3.26E-21 T 11-11-2016 S40542_RS10965 087071233d1b4ff7021083d22d5ca0f6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.2E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS10965 087071233d1b4ff7021083d22d5ca0f6 303 SUPERFAMILY SSF46785 7 91 1.09E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS10965 087071233d1b4ff7021083d22d5ca0f6 303 Gene3D G3DSA:3.40.190.10 92 187 2.6E-10 T 11-11-2016 S40542_RS10965 087071233d1b4ff7021083d22d5ca0f6 303 Pfam PF03466 LysR substrate binding domain 92 295 2.8E-19 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS10965 087071233d1b4ff7021083d22d5ca0f6 303 Gene3D G3DSA:1.10.10.10 5 85 9.4E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01095 9a356ffe7c2f37de94142f2b3f7b2806 243 Pfam PF00005 ABC transporter 25 175 7.6E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS01095 9a356ffe7c2f37de94142f2b3f7b2806 243 SUPERFAMILY SSF52540 6 232 5.06E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01095 9a356ffe7c2f37de94142f2b3f7b2806 243 Gene3D G3DSA:3.40.50.300 3 230 3.6E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01095 9a356ffe7c2f37de94142f2b3f7b2806 243 SMART SM00382 34 223 2.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS01095 9a356ffe7c2f37de94142f2b3f7b2806 243 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 Pfam PF00890 FAD binding domain 10 390 6.4E-101 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 Pfam PF02910 Fumarate reductase flavoprotein C-term 439 523 2.4E-15 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 8.8E-8 T 11-11-2016 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 8.8E-8 T 11-11-2016 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 SUPERFAMILY SSF56425 236 351 2.09E-41 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 Gene3D G3DSA:1.20.58.100 414 520 1.9E-34 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 Gene3D G3DSA:3.90.700.10 242 346 4.8E-38 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 SUPERFAMILY SSF51905 5 262 4.97E-69 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 SUPERFAMILY SSF51905 354 445 4.97E-69 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 SUPERFAMILY SSF46977 424 523 3.79E-32 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 518 1.2E-207 T 11-11-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 Gene3D G3DSA:3.50.50.60 2 241 4.8E-102 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS15635 023c0a662d7dc7e0ab892276feee8c42 531 Gene3D G3DSA:3.50.50.60 347 410 4.8E-102 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS00960 8ee7b687495b848eb723ce08e132e0be 59 PIRSF PIRSF002211 1 59 8.2E-30 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 S40542_RS00960 8ee7b687495b848eb723ce08e132e0be 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 2.9E-22 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain S40542_RS00960 8ee7b687495b848eb723ce08e132e0be 59 Gene3D G3DSA:3.30.1390.20 3 58 3.4E-32 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain S40542_RS00960 8ee7b687495b848eb723ce08e132e0be 59 SUPERFAMILY SSF55129 3 58 1.2E-22 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain S40542_RS00960 8ee7b687495b848eb723ce08e132e0be 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.368 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 S40542_RS00960 8ee7b687495b848eb723ce08e132e0be 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 58 4.7E-28 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 S40542_RS00960 8ee7b687495b848eb723ce08e132e0be 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 11-11-2016 IPR018038 Ribosomal protein L30, conserved site S40542_RS06545 a745e21b1844caf993718ebc54f19b5a 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 8.6E-16 T 11-11-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 S40542_RS06545 a745e21b1844caf993718ebc54f19b5a 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 8.6E-18 T 11-11-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 S40542_RS04550 4919733bf9f3c844bc0706a6651e3494 236 Pfam PF01168 Alanine racemase, N-terminal domain 32 235 2.1E-31 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS04550 4919733bf9f3c844bc0706a6651e3494 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 85 99 - T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 S40542_RS04550 4919733bf9f3c844bc0706a6651e3494 236 Gene3D G3DSA:3.20.20.10 8 236 6.1E-89 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS04550 4919733bf9f3c844bc0706a6651e3494 236 SUPERFAMILY SSF51419 7 233 1.7E-80 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS04550 4919733bf9f3c844bc0706a6651e3494 236 PIRSF PIRSF004848 1 236 5.1E-78 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 S40542_RS04550 4919733bf9f3c844bc0706a6651e3494 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 10 235 1.2E-85 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 928 0.0 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 SUPERFAMILY SSF47323 639 895 5.42E-71 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 SUPERFAMILY SSF46589 881 945 1.99E-13 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Pfam PF08264 Anticodon-binding domain of tRNA 671 821 5.6E-43 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Gene3D G3DSA:1.10.730.10 628 812 6.9E-65 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Gene3D G3DSA:1.10.287.380 875 937 7.0E-7 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 SUPERFAMILY SSF52374 606 638 1.56E-136 T 11-11-2016 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 SUPERFAMILY SSF52374 1 190 1.56E-136 T 11-11-2016 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 SUPERFAMILY SSF52374 361 568 1.56E-136 T 11-11-2016 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 881 943 1.9E-14 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 PRINTS PR00986 Valyl-tRNA synthetase signature 366 379 2.4E-35 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 2.4E-35 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 PRINTS PR00986 Valyl-tRNA synthetase signature 497 515 2.4E-35 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 2.4E-35 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 PRINTS PR00986 Valyl-tRNA synthetase signature 234 251 2.4E-35 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 SUPERFAMILY SSF50677 189 362 8.63E-58 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Gene3D G3DSA:3.40.50.620 606 627 1.3E-141 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Gene3D G3DSA:3.40.50.620 361 568 1.3E-141 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Gene3D G3DSA:3.40.50.620 3 191 1.3E-141 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 628 4.0E-218 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 946 16.123 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 S40542_RS04480 1bc83c1f7263919bbceea5629582c952 948 Gene3D G3DSA:3.90.740.10 192 357 1.0E-46 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 S40542_RS01640 9f92c87be465ca1f4a91000946759886 250 Gene3D G3DSA:3.40.50.720 4 250 6.8E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01640 9f92c87be465ca1f4a91000946759886 250 SUPERFAMILY SSF69572 4 250 1.11E-75 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 S40542_RS01640 9f92c87be465ca1f4a91000946759886 250 Pfam PF00899 ThiF family 13 246 1.7E-60 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 S40542_RS01640 9f92c87be465ca1f4a91000946759886 250 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 35 63 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 S40542_RS03190 40e6b3660d3185dd9e028488885d1e0b 279 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 278 2.1E-96 T 11-11-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 S40542_RS03190 40e6b3660d3185dd9e028488885d1e0b 279 PIRSF PIRSF006250 2 279 6.8E-104 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 S40542_RS03190 40e6b3660d3185dd9e028488885d1e0b 279 SUPERFAMILY SSF54675 3 112 8.54E-31 T 11-11-2016 S40542_RS03190 40e6b3660d3185dd9e028488885d1e0b 279 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 111 2.0E-26 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 S40542_RS03190 40e6b3660d3185dd9e028488885d1e0b 279 Gene3D G3DSA:3.90.1170.20 2 133 1.2E-47 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 S40542_RS03190 40e6b3660d3185dd9e028488885d1e0b 279 Gene3D G3DSA:3.20.20.70 134 267 5.3E-60 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS03190 40e6b3660d3185dd9e028488885d1e0b 279 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 277 1.1E-59 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 S40542_RS03190 40e6b3660d3185dd9e028488885d1e0b 279 SUPERFAMILY SSF51690 114 278 1.92E-58 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 SUPERFAMILY SSF47384 262 326 2.35E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 Gene3D G3DSA:3.30.565.10 314 478 4.1E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 SUPERFAMILY SSF55874 317 477 2.23E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 SUPERFAMILY SSF103190 65 182 1.22E-10 T 11-11-2016 IPR029151 Periplasmic sensor domain-like S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 478 1.2E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 SMART SM00387 372 480 3.0E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 SMART SM00388 262 327 1.2E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 PRINTS PR01780 Lantibiotic regulatory protein signature 368 383 6.7E-7 T 11-11-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 PRINTS PR01780 Lantibiotic regulatory protein signature 271 287 6.7E-7 T 11-11-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 PRINTS PR01780 Lantibiotic regulatory protein signature 432 447 6.7E-7 T 11-11-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 PRINTS PR01780 Lantibiotic regulatory protein signature 411 427 6.7E-7 T 11-11-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 Gene3D G3DSA:3.30.450.20 53 173 6.6E-5 T 11-11-2016 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 267 326 1.6E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07850 f3b6a0cbdaadc77c6ad3f56911b874d3 480 Gene3D G3DSA:1.10.287.130 268 313 1.7E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS14720 4abace74ddc149f9673c0dc5df72301f 314 SUPERFAMILY SSF55781 92 298 5.1E-14 T 11-11-2016 IPR029016 GAF domain-like S40542_RS14720 4abace74ddc149f9673c0dc5df72301f 314 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 2 310 14.882 T 11-11-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 S40542_RS14720 4abace74ddc149f9673c0dc5df72301f 314 Gene3D G3DSA:1.10.10.10 1 85 1.9E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14720 4abace74ddc149f9673c0dc5df72301f 314 Pfam PF01628 HrcA protein C terminal domain 98 294 1.2E-9 T 11-11-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 S40542_RS14720 4abace74ddc149f9673c0dc5df72301f 314 SUPERFAMILY SSF46785 3 83 1.72E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14720 4abace74ddc149f9673c0dc5df72301f 314 PIRSF PIRSF005485 1 312 2.2E-33 T 11-11-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Pfam PF04542 Sigma-70 region 2 377 446 1.7E-21 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 373 609 2.3E-121 T 11-11-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Pfam PF04546 Sigma-70, non-essential region 137 346 5.1E-65 T 11-11-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 SUPERFAMILY SSF88946 113 444 1.7E-99 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Gene3D G3DSA:1.10.10.10 541 610 4.4E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Gene3D G3DSA:1.10.601.10 110 446 1.0E-129 T 11-11-2016 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 373 598 1.3E-37 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Pfam PF04539 Sigma-70 region 3 456 532 1.2E-30 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 401 414 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Pfam PF03979 Sigma-70 factor, region 1.1 5 80 9.1E-29 T 11-11-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 SUPERFAMILY SSF88659 507 609 8.5E-26 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 PRINTS PR00046 Major sigma-70 factor signature 401 414 6.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 PRINTS PR00046 Major sigma-70 factor signature 425 433 6.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 PRINTS PR00046 Major sigma-70 factor signature 570 585 6.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 PRINTS PR00046 Major sigma-70 factor signature 549 561 6.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 PRINTS PR00046 Major sigma-70 factor signature 585 596 6.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 610 45.643 T 11-11-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Pfam PF04545 Sigma-70, region 4 545 598 8.9E-19 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Gene3D G3DSA:1.10.10.10 450 501 4.7E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18020 face555ac5708511294c7417c90fe28e 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 8.6E-12 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 570 596 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS18020 face555ac5708511294c7417c90fe28e 613 SUPERFAMILY SSF88659 450 523 2.28E-20 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF47336 2103 2173 9.16E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.40.50.980 1732 1885 1.8E-32 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.40.50.980 666 823 9.4E-33 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.40.50.980 2819 2979 3.4E-26 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF52777 2196 2380 6.78E-39 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF56801 2626 3216 1.24E-111 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF52777 1294 1541 9.12E-43 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:2.30.38.10 824 903 5.9E-19 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:2.30.38.10 2988 3066 3.0E-16 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:2.30.38.10 1897 1973 2.4E-15 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF52777 240 482 4.34E-54 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF47336 3196 3268 1.57E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1047 1062 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 937 2.0E-100 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2686 3110 1.2E-99 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF13745 HxxPF-repeated domain 2521 2611 3.6E-27 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF13745 HxxPF-repeated domain 373 463 2.1E-18 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF13745 HxxPF-repeated domain 1429 1518 1.7E-18 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF56801 1531 2091 8.63E-107 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00668 Condensation domain 61 351 1.4E-65 T 11-11-2016 IPR001242 Condensation domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00668 Condensation domain 1105 1404 3.2E-69 T 11-11-2016 IPR001242 Condensation domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00668 Condensation domain 2192 2499 2.1E-69 T 11-11-2016 IPR001242 Condensation domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.30.300.30 1988 2089 1.5E-21 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2132 2147 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1725 1736 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 ProSitePatterns PS00455 Putative AMP-binding domain signature. 659 670 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.40.50.980 506 665 5.2E-34 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00501 AMP-binding enzyme 1573 1994 5.0E-70 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00501 AMP-binding enzyme 2665 3086 3.1E-75 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00501 AMP-binding enzyme 512 912 1.1E-67 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF52777 1111 1288 7.89E-39 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF52777 65 233 1.93E-35 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF52777 2388 2628 4.67E-55 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF47336 1016 1088 1.14E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.30.300.30 3081 3206 1.2E-24 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.30.300.30 909 1026 1.1E-26 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:1.10.1200.10 2103 2173 3.9E-21 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:1.10.1200.10 1027 1093 6.3E-23 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:1.10.1200.10 3207 3269 1.4E-21 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00550 Phosphopantetheine attachment site 2119 2173 4.3E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00550 Phosphopantetheine attachment site 1025 1086 1.1E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF00550 Phosphopantetheine attachment site 3206 3268 5.3E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Pfam PF13193 AMP-binding enzyme C-terminal domain 921 998 4.4E-6 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.40.50.980 2659 2818 2.4E-43 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 Gene3D G3DSA:3.40.50.980 1571 1731 5.0E-33 T 11-11-2016 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2813 2824 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SMART SM00823 Phosphopantetheine attachment site 2104 2179 0.019 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SMART SM00823 Phosphopantetheine attachment site 1023 1092 0.0022 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SMART SM00823 Phosphopantetheine attachment site 3200 3272 0.025 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01785 bdfa2a50d7c31ea5b4ea98229587e4fb 3290 SUPERFAMILY SSF56801 502 1032 1.1E-112 T 11-11-2016 S40542_RS05200 3d35002ca69c67e14cea343fc8ff26ae 458 Pfam PF03553 Na+/H+ antiporter family 159 455 1.1E-44 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 S40542_RS15930 187aea2a59fdc8e5c9850d2353ffa4a5 224 Gene3D G3DSA:2.40.50.40 122 184 4.8E-11 T 11-11-2016 S40542_RS15930 187aea2a59fdc8e5c9850d2353ffa4a5 224 SMART SM00850 129 224 4.0E-16 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS15930 187aea2a59fdc8e5c9850d2353ffa4a5 224 Pfam PF00072 Response regulator receiver domain 4 110 2.1E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15930 187aea2a59fdc8e5c9850d2353ffa4a5 224 SUPERFAMILY SSF52172 4 119 3.56E-31 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15930 187aea2a59fdc8e5c9850d2353ffa4a5 224 SMART SM00448 1 112 2.5E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15930 187aea2a59fdc8e5c9850d2353ffa4a5 224 Gene3D G3DSA:3.40.50.2300 2 116 8.0E-32 T 11-11-2016 S40542_RS15930 187aea2a59fdc8e5c9850d2353ffa4a5 224 Pfam PF04397 LytTr DNA-binding domain 131 223 3.5E-18 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS01425 16d46a2fbe0735944af8cf4fd2525481 370 SUPERFAMILY SSF53187 149 363 6.62E-42 T 11-11-2016 S40542_RS01425 16d46a2fbe0735944af8cf4fd2525481 370 SUPERFAMILY SSF53187 19 110 6.62E-42 T 11-11-2016 S40542_RS01425 16d46a2fbe0735944af8cf4fd2525481 370 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 32 363 1.3E-56 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 S40542_RS01425 16d46a2fbe0735944af8cf4fd2525481 370 Gene3D G3DSA:3.40.630.10 18 135 4.0E-22 T 11-11-2016 S40542_RS01425 16d46a2fbe0735944af8cf4fd2525481 370 Gene3D G3DSA:3.40.630.10 167 268 4.0E-22 T 11-11-2016 S40542_RS01890 72ec3e2d541ebc492c7f324dca359a53 409 Pfam PF00144 Beta-lactamase 102 382 6.7E-11 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS01890 72ec3e2d541ebc492c7f324dca359a53 409 Gene3D G3DSA:3.40.710.10 102 401 2.0E-27 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS01890 72ec3e2d541ebc492c7f324dca359a53 409 SUPERFAMILY SSF56601 12 389 1.97E-50 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS13825 b0a289e032251263a75fafb952b13f40 676 SUPERFAMILY SSF82171 34 394 1.29E-33 T 11-11-2016 S40542_RS13825 b0a289e032251263a75fafb952b13f40 676 Pfam PF07676 WD40-like Beta Propeller Repeat 261 283 3.6E-4 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS13825 b0a289e032251263a75fafb952b13f40 676 Gene3D G3DSA:2.120.10.30 35 149 7.7E-34 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS13825 b0a289e032251263a75fafb952b13f40 676 Gene3D G3DSA:2.120.10.30 190 337 7.7E-34 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS13825 b0a289e032251263a75fafb952b13f40 676 Gene3D G3DSA:3.40.50.1820 429 672 1.2E-61 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13825 b0a289e032251263a75fafb952b13f40 676 Pfam PF00326 Prolyl oligopeptidase family 465 672 2.7E-45 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS13825 b0a289e032251263a75fafb952b13f40 676 SUPERFAMILY SSF53474 428 672 1.63E-63 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS15775 331fb7d9b90279b001f1c0dfdbf2083d 109 Gene3D G3DSA:3.30.780.10 30 109 7.9E-31 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 S40542_RS15775 331fb7d9b90279b001f1c0dfdbf2083d 109 PIRSF PIRSF037511 1 109 1.2E-31 T 11-11-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 S40542_RS15775 331fb7d9b90279b001f1c0dfdbf2083d 109 SUPERFAMILY SSF55159 5 105 1.03E-21 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 S40542_RS15775 331fb7d9b90279b001f1c0dfdbf2083d 109 Pfam PF01253 Translation initiation factor SUI1 32 103 9.0E-17 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 S40542_RS15775 331fb7d9b90279b001f1c0dfdbf2083d 109 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 6 109 4.9E-34 T 11-11-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 Pfam PF01380 SIS domain 39 171 3.1E-32 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 Pfam PF00571 CBS domain 202 256 3.9E-5 T 11-11-2016 IPR000644 CBS domain S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 Pfam PF00571 CBS domain 271 320 1.2E-5 T 11-11-2016 IPR000644 CBS domain S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 Gene3D G3DSA:3.40.50.10490 8 194 6.7E-56 T 11-11-2016 S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 SMART SM00116 274 322 6.4 T 11-11-2016 IPR000644 CBS domain S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 SMART SM00116 209 257 1.4 T 11-11-2016 IPR000644 CBS domain S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 PIRSF PIRSF004692 1 323 1.1E-129 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 44 313 1.6E-108 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 SUPERFAMILY SSF53697 5 320 6.23E-67 T 11-11-2016 S40542_RS19005 015d4f79d7e0b3fcfd683cf16d334c41 323 Gene3D G3DSA:3.10.580.10 195 320 2.0E-35 T 11-11-2016 S40542_RS06770 e188fcfdbfb27d7b87d64dd1d34a9d93 276 Pfam PF01609 Transposase DDE domain 130 255 4.1E-11 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06770 e188fcfdbfb27d7b87d64dd1d34a9d93 276 Pfam PF13006 Insertion element 4 transposase N-terminal 17 106 2.6E-30 T 11-11-2016 IPR024473 Transposase, IS4, N-terminal S40542_RS06770 e188fcfdbfb27d7b87d64dd1d34a9d93 276 SUPERFAMILY SSF53098 116 267 3.41E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 SUPERFAMILY SSF46689 85 132 7.62E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Gene3D G3DSA:3.40.10.10 3 82 1.4E-32 T 11-11-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 SMART SM01009 193 308 2.2E-38 T 11-11-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Pfam PF12833 Helix-turn-helix domain 105 184 1.9E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Pfam PF06029 AlkA N-terminal domain 193 308 6.4E-39 T 11-11-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 SUPERFAMILY SSF48150 299 451 5.58E-26 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 SMART SM00342 99 182 5.7E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 SUPERFAMILY SSF57884 2 81 2.35E-30 T 11-11-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 SUPERFAMILY SSF55945 193 289 4.71E-29 T 11-11-2016 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Gene3D G3DSA:1.10.10.60 140 193 1.3E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 SUPERFAMILY SSF46689 139 186 8.06E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Gene3D G3DSA:1.10.1670.10 413 451 1.7E-4 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Gene3D G3DSA:1.10.340.30 310 409 5.9E-23 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Pfam PF02805 Metal binding domain of Ada 7 70 8.8E-28 T 11-11-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Gene3D G3DSA:1.10.10.60 84 133 7.5E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16245 f11b5c589eedb9c17ee06ec1e97ac228 453 Gene3D G3DSA:3.30.310.20 194 308 8.6E-35 T 11-11-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 Gene3D G3DSA:1.50.10.100 213 573 4.8E-104 T 11-11-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 Pfam PF09092 Lyase, N terminal 28 195 1.9E-40 T 11-11-2016 IPR015176 Lyase, N-terminal S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 SUPERFAMILY SSF49785 25 198 3.4E-35 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 Gene3D G3DSA:2.60.220.10 860 970 6.8E-12 T 11-11-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 SUPERFAMILY SSF48230 212 573 2.54E-102 T 11-11-2016 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 Gene3D G3DSA:2.70.98.10 575 849 2.7E-69 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 SUPERFAMILY SSF74650 575 850 1.83E-62 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 Pfam PF09093 Lyase, catalytic 213 558 3.8E-99 T 11-11-2016 IPR015177 Lyase, catalytic S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 585 834 3.9E-27 T 11-11-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 Gene3D G3DSA:2.60.120.410 25 198 1.1E-41 T 11-11-2016 IPR015176 Lyase, N-terminal S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 SUPERFAMILY SSF49863 860 970 2.28E-7 T 11-11-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 S40542_RS13680 5eae8869b16b73e71e8e36fed3ccc0fe 972 PIRSF PIRSF034515 5 972 8.4E-267 T 11-11-2016 IPR024200 Chondroitin sulfate ABC endolyase GO:0005975|GO:0034000 S40542_RS02800 e9fb90e094232399af262811acb49304 460 SUPERFAMILY SSF118215 29 441 2.35E-90 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 6.2E-99 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 3.1E-27 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 3.1E-27 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 3.1E-27 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 3.1E-27 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 3.1E-27 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 3.1E-27 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 3.1E-27 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02800 e9fb90e094232399af262811acb49304 460 Gene3D G3DSA:1.10.3860.10 23 446 4.0E-93 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS14250 73ffac4c0b354c58609cc87a84bc1358 224 Gene3D G3DSA:3.40.50.2300 1 122 1.5E-37 T 11-11-2016 S40542_RS14250 73ffac4c0b354c58609cc87a84bc1358 224 SUPERFAMILY SSF46894 118 221 1.25E-27 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS14250 73ffac4c0b354c58609cc87a84bc1358 224 Gene3D G3DSA:1.10.10.10 123 222 1.8E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14250 73ffac4c0b354c58609cc87a84bc1358 224 Pfam PF00072 Response regulator receiver domain 3 112 1.7E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS14250 73ffac4c0b354c58609cc87a84bc1358 224 SUPERFAMILY SSF52172 1 118 2.28E-38 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS14250 73ffac4c0b354c58609cc87a84bc1358 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.8E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS14250 73ffac4c0b354c58609cc87a84bc1358 224 SMART SM00448 1 112 1.0E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS14250 73ffac4c0b354c58609cc87a84bc1358 224 SMART SM00862 145 220 1.6E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS09265 12abf351a17c5149fb55d9f92b309968 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 62 2.4E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS09265 12abf351a17c5149fb55d9f92b309968 291 SUPERFAMILY SSF53850 89 289 1.48E-41 T 11-11-2016 S40542_RS09265 12abf351a17c5149fb55d9f92b309968 291 Gene3D G3DSA:3.40.190.10 178 254 3.0E-18 T 11-11-2016 S40542_RS09265 12abf351a17c5149fb55d9f92b309968 291 SUPERFAMILY SSF46785 9 88 7.71E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09265 12abf351a17c5149fb55d9f92b309968 291 Gene3D G3DSA:3.40.190.10 92 177 2.4E-20 T 11-11-2016 S40542_RS09265 12abf351a17c5149fb55d9f92b309968 291 Pfam PF03466 LysR substrate binding domain 88 287 8.4E-43 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS09265 12abf351a17c5149fb55d9f92b309968 291 Gene3D G3DSA:1.10.10.10 9 85 1.6E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02090 86e2c9e10535c7fb485b2beb6caac839 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 31 1.3E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS02090 86e2c9e10535c7fb485b2beb6caac839 200 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 32 8.4E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS02090 86e2c9e10535c7fb485b2beb6caac839 200 Gene3D G3DSA:3.55.40.10 49 198 9.7E-34 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 S40542_RS02090 86e2c9e10535c7fb485b2beb6caac839 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 13 27 1.5E-12 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 S40542_RS02090 86e2c9e10535c7fb485b2beb6caac839 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 154 169 1.5E-12 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 S40542_RS02090 86e2c9e10535c7fb485b2beb6caac839 200 PRINTS PR00885 Bacterial general secretion pathway protein H signature 28 42 1.5E-12 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 S40542_RS02090 86e2c9e10535c7fb485b2beb6caac839 200 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 13 178 2.1E-13 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 S40542_RS11800 77886465dfe9ac95b2b0fa1d7fbc296d 603 SMART SM00220 44 310 7.1E-6 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 S40542_RS11800 77886465dfe9ac95b2b0fa1d7fbc296d 603 Gene3D G3DSA:3.30.200.20 26 135 6.5E-9 T 11-11-2016 S40542_RS11800 77886465dfe9ac95b2b0fa1d7fbc296d 603 Pfam PF00069 Protein kinase domain 44 258 5.4E-15 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 S40542_RS11800 77886465dfe9ac95b2b0fa1d7fbc296d 603 SUPERFAMILY SSF56112 43 303 4.51E-25 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS11800 77886465dfe9ac95b2b0fa1d7fbc296d 603 Gene3D G3DSA:1.10.510.10 136 299 5.4E-9 T 11-11-2016 S40542_RS11800 77886465dfe9ac95b2b0fa1d7fbc296d 603 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 50 72 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 S40542_RS16505 850c91fd789771b59a5a66fb80eb6a0e 284 Pfam PF09684 Phage tail protein (Tail_P2_I) 38 144 5.4E-6 T 11-11-2016 IPR006521 Tail protein I S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 5.1E-189 T 11-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 47.239 T 11-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Gene3D G3DSA:3.30.310.50 370 444 2.5E-17 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.2E-14 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.2E-14 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 2.2E-14 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Gene3D G3DSA:3.40.120.10 4 152 8.1E-48 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 363 8.2E-29 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 9.4E-14 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 SUPERFAMILY SSF53738 2 181 2.04E-48 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 SUPERFAMILY SSF55957 357 444 1.23E-20 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Gene3D G3DSA:3.40.120.10 251 369 5.0E-29 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.4E-20 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 3.2E-45 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 Gene3D G3DSA:3.40.120.10 176 250 2.6E-26 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 SUPERFAMILY SSF53738 156 256 2.86E-31 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15420 b379434045114ab6df2d534a1de445f4 446 SUPERFAMILY SSF53738 258 362 3.92E-27 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11445 5e2cb4b88bd7842354e83acb467b8f9c 291 PIRSF PIRSF000103 1 291 2.5E-70 T 11-11-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 S40542_RS11445 5e2cb4b88bd7842354e83acb467b8f9c 291 Gene3D G3DSA:1.10.1040.10 172 290 1.5E-39 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS11445 5e2cb4b88bd7842354e83acb467b8f9c 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 1.3E-32 T 11-11-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 S40542_RS11445 5e2cb4b88bd7842354e83acb467b8f9c 291 Gene3D G3DSA:3.40.50.720 2 171 8.5E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11445 5e2cb4b88bd7842354e83acb467b8f9c 291 SUPERFAMILY SSF48179 168 290 9.41E-39 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS11445 5e2cb4b88bd7842354e83acb467b8f9c 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 161 4.5E-47 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 S40542_RS11445 5e2cb4b88bd7842354e83acb467b8f9c 291 SUPERFAMILY SSF51735 6 168 1.26E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11445 5e2cb4b88bd7842354e83acb467b8f9c 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 11-11-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 S40542_RS03220 3426b77e7d2c1a9e7785af5971966de2 445 Pfam PF04225 Opacity-associated protein A LysM-like domain 87 167 2.0E-7 T 11-11-2016 IPR007340 Opacity-associated protein A S40542_RS03220 3426b77e7d2c1a9e7785af5971966de2 445 Gene3D G3DSA:2.70.70.10 266 404 1.4E-45 T 11-11-2016 S40542_RS03220 3426b77e7d2c1a9e7785af5971966de2 445 SUPERFAMILY SSF51261 157 403 1.62E-71 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS03220 3426b77e7d2c1a9e7785af5971966de2 445 Pfam PF01551 Peptidase family M23 308 402 9.1E-32 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS11560 dc038052743e42b09f952948360805de 84 SUPERFAMILY SSF52833 2 77 8.73E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS11560 dc038052743e42b09f952948360805de 84 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 76 2.5E-12 T 11-11-2016 IPR008554 Glutaredoxin-like S40542_RS11560 dc038052743e42b09f952948360805de 84 Gene3D G3DSA:3.40.30.10 3 81 3.8E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 SUPERFAMILY SSF82866 797 1021 1.09E-47 T 11-11-2016 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 Gene3D G3DSA:3.30.70.1430 40 137 2.6E-21 T 11-11-2016 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 SUPERFAMILY SSF82693 40 127 1.36E-18 T 11-11-2016 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 Pfam PF00873 AcrB/AcrD/AcrF family 1 1019 8.4E-186 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 SUPERFAMILY SSF82714 177 261 8.5E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 SUPERFAMILY SSF82693 263 319 1.7E-17 T 11-11-2016 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 SUPERFAMILY SSF82693 140 176 1.7E-17 T 11-11-2016 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 SUPERFAMILY SSF82866 287 483 4.71E-41 T 11-11-2016 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 SUPERFAMILY SSF82714 724 797 6.15E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 Gene3D G3DSA:3.30.2090.10 724 797 5.1E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 Gene3D G3DSA:1.10.3850.10 803 1021 9.5E-61 T 11-11-2016 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 Gene3D G3DSA:1.10.3850.10 268 484 1.4E-52 T 11-11-2016 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 325 348 1.0E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 379 403 1.0E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.0E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 PRINTS PR00702 Acriflavin resistance protein family signature 432 455 1.0E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08860 ae001095240572c6e5f9792d327e590c 1036 Gene3D G3DSA:3.30.2090.10 176 263 8.2E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS14650 b582d98d759aa3ba505405d897637a53 251 Pfam PF13432 Tetratricopeptide repeat 183 237 5.4E-7 T 11-11-2016 S40542_RS14650 b582d98d759aa3ba505405d897637a53 251 SUPERFAMILY SSF48452 139 243 1.43E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14650 b582d98d759aa3ba505405d897637a53 251 Pfam PF16331 TolA binding protein trimerisation 35 108 1.3E-19 T 11-11-2016 IPR032519 YbgF, trimerisation domain GO:0070206 S40542_RS14650 b582d98d759aa3ba505405d897637a53 251 Gene3D G3DSA:1.25.40.10 122 237 1.5E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14650 b582d98d759aa3ba505405d897637a53 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 130 248 7.2E-41 T 11-11-2016 IPR014162 Tol-Pal system, YbgF S40542_RS14650 b582d98d759aa3ba505405d897637a53 251 SMART SM00028 168 201 9.2 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS14650 b582d98d759aa3ba505405d897637a53 251 SMART SM00028 205 238 37.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 701 110.715 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 SUPERFAMILY SSF54211 487 608 2.12E-43 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Pfam PF03144 Elongation factor Tu domain 2 329 396 7.3E-17 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Gene3D G3DSA:3.30.70.240 609 695 2.7E-33 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Gene3D G3DSA:3.30.70.870 411 485 1.6E-38 T 11-11-2016 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 SMART SM00838 609 697 3.6E-56 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 SUPERFAMILY SSF50447 271 409 1.52E-34 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 SUPERFAMILY SSF52540 6 288 2.94E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.4E-35 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Gene3D G3DSA:2.40.30.10 310 410 6.5E-37 T 11-11-2016 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Pfam PF00679 Elongation factor G C-terminus 609 696 1.1E-30 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 SUPERFAMILY SSF54980 612 699 2.93E-29 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Gene3D G3DSA:3.30.230.10 489 608 1.9E-48 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 SUPERFAMILY SSF54980 407 485 2.09E-24 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 SMART SM00889 485 607 1.9E-71 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Gene3D G3DSA:3.40.50.300 6 293 9.3E-107 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Pfam PF03764 Elongation factor G, domain IV 484 607 1.8E-43 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.3E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.3E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.3E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.3E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.3E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.0E-69 T 11-11-2016 S40542_RS19515 4525eedb9d118d72d939f8517747159c 704 Pfam PF14492 Elongation Factor G, domain II 409 482 1.6E-33 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS01330 5126230ea7493d9434124fe6cb909027 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 11 98 3.0E-42 T 11-11-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 S40542_RS01330 5126230ea7493d9434124fe6cb909027 106 Gene3D G3DSA:1.10.140.10 2 103 4.6E-60 T 11-11-2016 IPR023453 Methionine repressor MetJ domain S40542_RS01330 5126230ea7493d9434124fe6cb909027 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.5E-59 T 11-11-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 S40542_RS01330 5126230ea7493d9434124fe6cb909027 106 SUPERFAMILY SSF47598 2 104 1.8E-56 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 S40542_RS12955 6c9e3ba3e3c6b39b5c39ddf44753592e 537 Gene3D G3DSA:3.40.50.1820 251 276 4.6E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS12955 6c9e3ba3e3c6b39b5c39ddf44753592e 537 Gene3D G3DSA:3.40.50.1820 141 212 4.6E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS12955 6c9e3ba3e3c6b39b5c39ddf44753592e 537 SUPERFAMILY SSF53474 161 276 7.75E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS12955 6c9e3ba3e3c6b39b5c39ddf44753592e 537 Pfam PF07819 PGAP1-like protein 118 219 3.4E-8 T 11-11-2016 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 Gene3D G3DSA:3.30.930.10 146 507 5.7E-119 T 11-11-2016 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 Gene3D G3DSA:2.40.50.140 9 143 4.9E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 SUPERFAMILY SSF55681 151 509 6.37E-116 T 11-11-2016 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 1.7E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 PRINTS PR00982 Lysyl-tRNA synthetase signature 393 409 1.7E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 1.7E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 1.7E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 1.7E-38 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 511 7.4E-200 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 SUPERFAMILY SSF50249 6 144 1.15E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 Pfam PF00152 tRNA synthetases class II (D, K and N) 152 508 6.4E-84 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 511 43.247 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 S40542_RS05145 f5dc1daaff514be934b22ab72cbf1e86 513 Pfam PF01336 OB-fold nucleic acid binding domain 63 137 1.3E-7 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 Gene3D G3DSA:1.10.8.60 370 420 3.8E-17 T 11-11-2016 S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 220 233 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 Gene3D G3DSA:3.30.450.40 3 163 5.6E-6 T 11-11-2016 IPR029016 GAF domain-like S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 409 418 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 SUPERFAMILY SSF52540 196 433 1.44E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 SUPERFAMILY SSF46689 465 516 1.93E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 Pfam PF00158 Sigma-54 interaction domain 196 362 2.5E-68 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 Gene3D G3DSA:1.10.10.60 421 516 2.5E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 Gene3D G3DSA:3.40.50.300 193 368 4.7E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 SMART SM00382 216 360 1.2E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS08210 01a480548934ae48c3d0989da6d6dd69 523 SUPERFAMILY SSF55781 22 163 3.6E-7 T 11-11-2016 IPR029016 GAF domain-like S40542_RS00540 8fbdcc9262af5c888ca002c3bcaac115 658 Gene3D G3DSA:2.120.10.30 37 294 3.7E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS00540 8fbdcc9262af5c888ca002c3bcaac115 658 Gene3D G3DSA:3.40.50.1820 337 654 1.5E-81 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00540 8fbdcc9262af5c888ca002c3bcaac115 658 Pfam PF00326 Prolyl oligopeptidase family 444 654 4.8E-48 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS00540 8fbdcc9262af5c888ca002c3bcaac115 658 SUPERFAMILY SSF53474 398 654 5.73E-72 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00540 8fbdcc9262af5c888ca002c3bcaac115 658 SUPERFAMILY SSF82171 39 77 5.76E-15 T 11-11-2016 S40542_RS00540 8fbdcc9262af5c888ca002c3bcaac115 658 SUPERFAMILY SSF82171 117 396 5.76E-15 T 11-11-2016 S40542_RS04380 f86853a8a5d979dc0b7909ec08290ba8 447 SUPERFAMILY SSF52540 137 223 2.49E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04380 f86853a8a5d979dc0b7909ec08290ba8 447 SUPERFAMILY SSF52540 22 89 2.49E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04380 f86853a8a5d979dc0b7909ec08290ba8 447 Gene3D G3DSA:3.40.50.300 20 224 9.9E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04380 f86853a8a5d979dc0b7909ec08290ba8 447 Pfam PF07693 KAP family P-loop domain 17 313 1.0E-47 T 11-11-2016 IPR011646 KAP family P-loop domain S40542_RS00120 12485cb9ce37c1498904304f38baef4b 191 Gene3D G3DSA:3.90.870.10 3 189 4.1E-54 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain S40542_RS00120 12485cb9ce37c1498904304f38baef4b 191 Pfam PF01300 Telomere recombination 16 185 1.2E-42 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 S40542_RS00120 12485cb9ce37c1498904304f38baef4b 191 SUPERFAMILY SSF55821 11 189 7.63E-52 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain S40542_RS00120 12485cb9ce37c1498904304f38baef4b 191 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 8 190 39.965 T 11-11-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 S40542_RS18905 b7a57827544668c5656b91fc95c83a96 207 Gene3D G3DSA:1.20.1050.10 102 205 6.2E-17 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS18905 b7a57827544668c5656b91fc95c83a96 207 SUPERFAMILY SSF47616 82 206 6.4E-25 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS18905 b7a57827544668c5656b91fc95c83a96 207 SUPERFAMILY SSF52833 11 110 1.27E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS18905 b7a57827544668c5656b91fc95c83a96 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 87 3.7E-14 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 S40542_RS18905 b7a57827544668c5656b91fc95c83a96 207 Gene3D G3DSA:3.40.30.10 8 101 2.7E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS18905 b7a57827544668c5656b91fc95c83a96 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 192 9.5E-9 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal S40542_RS07815 83792287b8421af924b9cabbe7624e24 325 Gene3D G3DSA:3.40.50.2300 206 288 5.6E-10 T 11-11-2016 S40542_RS07815 83792287b8421af924b9cabbe7624e24 325 Gene3D G3DSA:3.40.50.2300 21 153 3.2E-10 T 11-11-2016 S40542_RS07815 83792287b8421af924b9cabbe7624e24 325 Pfam PF04392 ABC transporter substrate binding protein 58 322 1.1E-19 T 11-11-2016 IPR007487 ABC transporter, substrate-binding protein S40542_RS07815 83792287b8421af924b9cabbe7624e24 325 SUPERFAMILY SSF53822 24 285 2.25E-6 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS18420 42ab7c131be31a7c2454b8c8ee7cd910 301 Gene3D G3DSA:3.30.70.270 121 284 3.0E-44 T 11-11-2016 S40542_RS18420 42ab7c131be31a7c2454b8c8ee7cd910 301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 120 279 6.3E-36 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18420 42ab7c131be31a7c2454b8c8ee7cd910 301 SMART SM00267 108 283 4.8E-39 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18420 42ab7c131be31a7c2454b8c8ee7cd910 301 SUPERFAMILY SSF55073 124 283 1.73E-39 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS18420 42ab7c131be31a7c2454b8c8ee7cd910 301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 119 280 5.7E-38 T 11-11-2016 IPR000160 GGDEF domain S40542_RS04745 ceacb240832d94afca3dd473e40b9ebc 398 SUPERFAMILY SSF53383 6 396 9.31E-123 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS04745 ceacb240832d94afca3dd473e40b9ebc 398 Pfam PF00155 Aminotransferase class I and II 44 387 2.2E-76 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS04745 ceacb240832d94afca3dd473e40b9ebc 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 6 398 5.2E-209 T 11-11-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 S40542_RS04745 ceacb240832d94afca3dd473e40b9ebc 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 3 396 53.562 T 11-11-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 S40542_RS04745 ceacb240832d94afca3dd473e40b9ebc 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 242 251 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 S40542_RS04745 ceacb240832d94afca3dd473e40b9ebc 398 Gene3D G3DSA:3.40.640.10 59 279 4.1E-94 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS04745 ceacb240832d94afca3dd473e40b9ebc 398 Gene3D G3DSA:3.90.1150.10 280 393 3.5E-33 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 Gene3D G3DSA:3.40.50.970 163 550 1.8E-77 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 SMART SM00861 594 787 3.5E-58 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 6.5E-16 T 11-11-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 3.8E-53 T 11-11-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 SUPERFAMILY SSF52518 122 528 1.77E-84 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 SUPERFAMILY SSF52518 577 794 4.04E-51 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 PIRSF PIRSF000157 1 935 0.0 T 11-11-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 Gene3D G3DSA:3.40.50.970 592 790 3.2E-21 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 2.1E-62 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 Pfam PF00676 Dehydrogenase E1 component 221 516 1.7E-52 T 11-11-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 S40542_RS12045 21e5a82ebe01a7a29685af9c7f49013d 937 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 17 933 0.0 T 11-11-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 SMART SM00052 316 562 1.1E-68 T 11-11-2016 IPR001633 EAL domain S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 300 1.2E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 SUPERFAMILY SSF141868 321 570 2.88E-69 T 11-11-2016 IPR001633 EAL domain S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 Gene3D G3DSA:3.30.70.270 146 312 5.2E-53 T 11-11-2016 S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 304 7.1E-40 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 Gene3D G3DSA:3.40.50.2300 4 133 5.7E-26 T 11-11-2016 S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 Pfam PF00072 Response regulator receiver domain 7 110 4.5E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 Gene3D G3DSA:3.20.20.450 320 570 1.9E-72 T 11-11-2016 IPR001633 EAL domain S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 SUPERFAMILY SSF52172 4 139 6.83E-27 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 Pfam PF00563 EAL domain 323 557 1.3E-57 T 11-11-2016 IPR001633 EAL domain S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 SMART SM00267 133 306 2.3E-58 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 SMART SM00448 4 120 2.1E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07830 0e7384062c15a7883ab89dda90bb51a0 595 SUPERFAMILY SSF55073 149 308 1.49E-47 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS18180 d0084df646862a8fafea8eb6774511f2 225 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 7 225 3.4E-63 T 11-11-2016 IPR002727 Protein of unknown function DUF47 S40542_RS18180 d0084df646862a8fafea8eb6774511f2 225 SUPERFAMILY SSF109755 47 215 1.92E-15 T 11-11-2016 S40542_RS18180 d0084df646862a8fafea8eb6774511f2 225 Pfam PF01865 Protein of unknown function DUF47 7 224 6.0E-63 T 11-11-2016 IPR018445 Putative phosphate transport regulator S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3457 3859 6.8E-122 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00550 Phosphopantetheine attachment site 1694 1758 5.3E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00550 Phosphopantetheine attachment site 3959 4022 7.0E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00550 Phosphopantetheine attachment site 6216 6278 8.3E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00550 Phosphopantetheine attachment site 2888 2955 5.0E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00550 Phosphopantetheine attachment site 5078 5142 4.2E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.30.300.30 3830 3962 6.2E-28 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF08659 KR domain 5946 6126 7.5E-37 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF08659 KR domain 2618 2803 1.7E-54 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF08659 KR domain 4817 5003 2.0E-48 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF08659 KR domain 1063 1239 4.3E-42 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF52777 2977 3181 1.08E-27 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF51735 1061 1290 4.78E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF52777 3173 3410 4.11E-40 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00825 Beta-ketoacyl synthase 19 443 2.4E-177 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00825 Beta-ketoacyl synthase 4056 4474 3.8E-115 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00825 Beta-ketoacyl synthase 1823 2237 5.5E-186 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00825 Beta-ketoacyl synthase 5176 5584 1.4E-157 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM01294 1692 1758 4.1E-11 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM01294 5072 5142 2.1E-5 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 4425 4543 1.1E-15 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 5537 5645 1.2E-17 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 396 484 4.2E-13 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 2187 2300 2.5E-16 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF08242 Methyltransferase domain 1467 1569 6.7E-16 T 11-11-2016 IPR013217 Methyltransferase type 12 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00501 AMP-binding enzyme 3435 3835 9.9E-89 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.50.720 5945 6157 7.2E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.50.720 1062 1275 3.0E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.50.720 4815 5038 1.2E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.50.720 2616 2807 4.9E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:1.10.1200.10 3963 4027 6.4E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF07993 Male sterility protein 6330 6566 6.9E-52 T 11-11-2016 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 176 192 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF13193 AMP-binding enzyme C-terminal domain 3843 3915 1.4E-6 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.50.980 3587 3742 2.0E-44 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1971 1987 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF47336 5073 5187 7.46E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF53901 4450 4469 2.03E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF53901 4052 4161 2.03E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF53901 4191 4417 2.03E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF51735 5944 6172 1.44E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF14765 Polyketide synthase dehydratase 606 884 2.8E-46 T 11-11-2016 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF51735 2613 2837 4.55E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00668 Condensation domain 2981 3279 6.6E-50 T 11-11-2016 IPR001242 Condensation domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.47.10 1827 2071 1.2E-81 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.47.10 13 275 6.9E-94 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.47.10 5179 5417 6.8E-71 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 5412 5532 2.2E-40 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 4303 4421 6.2E-35 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2066 2183 6.0E-40 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 271 392 2.6E-37 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.50.150 1455 1675 2.7E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF47336 6209 6285 3.8E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF47336 3953 4066 6.67E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00826 606 768 1.2E-11 T 11-11-2016 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF47336 2881 2994 1.31E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF53901 5172 5523 5.14E-76 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF56801 3424 3968 3.92E-134 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1717 1732 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF53335 1397 1625 2.07E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF53901 14 383 1.34E-86 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.50.720 6327 6598 7.6E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4054 4295 1.4E-50 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1822 2058 2.3E-70 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5174 5403 1.3E-63 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 17 263 4.3E-83 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00823 Phosphopantetheine attachment site 3957 4026 0.0019 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00823 Phosphopantetheine attachment site 6213 6284 0.025 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00823 Phosphopantetheine attachment site 2885 2959 1.7E-9 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00823 Phosphopantetheine attachment site 5075 5146 7.7E-8 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00823 Phosphopantetheine attachment site 1690 1762 3.8E-16 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF51735 4813 5043 1.1E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:2.30.38.10 3749 3825 2.6E-21 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF51735 896 1036 4.33E-6 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1063 1241 3.1E-25 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4817 5004 2.9E-30 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2618 2804 1.4E-45 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5946 6128 2.6E-19 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.50.980 3429 3586 7.2E-46 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.47.10 4056 4307 4.6E-55 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3577 3588 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:1.10.1200.10 5073 5178 3.7E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:1.10.1200.10 2882 2964 4.5E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:1.10.1200.10 1690 1765 3.7E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:1.10.1200.10 1805 1826 3.7E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:1.10.1200.10 6208 6292 9.4E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 6328 6607 1.0E-71 T 11-11-2016 IPR010080 Thioester reductase-like domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF51735 6326 6599 3.08E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Pfam PF13745 HxxPF-repeated domain 3301 3392 9.8E-8 T 11-11-2016 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF53901 1818 2176 1.2E-80 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 SUPERFAMILY SSF47336 1689 1776 4.84E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.47.10 276 443 5.6E-51 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.47.10 4308 4473 2.4E-52 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.47.10 2072 2238 1.5E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13270 3560f46a96b5e7f3e1ee433ebb2e9425 6706 Gene3D G3DSA:3.40.47.10 5418 5584 7.2E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 44.469 T 11-11-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 Gene3D G3DSA:3.40.50.720 1 109 1.6E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 242 4.3E-31 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 29 284 2.0E-21 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 SUPERFAMILY SSF52283 4 103 3.19E-23 T 11-11-2016 S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 120 147 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 Pfam PF11890 Domain of unknown function (DUF3410) 290 368 1.9E-19 T 11-11-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 SUPERFAMILY SSF51735 92 249 5.42E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS17075 7e9133d96dd50308804f47e34f1aa2fd 376 Gene3D G3DSA:3.40.50.720 111 243 3.8E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 157 168 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 SUPERFAMILY SSF52743 126 380 6.55E-80 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 541 605 4.2E-10 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 432 496 9.9E-14 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 Pfam PF05922 Peptidase inhibitor I9 37 114 6.1E-8 T 11-11-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 SUPERFAMILY SSF54897 35 115 5.44E-11 T 11-11-2016 IPR009020 Proteinase propeptide inhibitor S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 Gene3D G3DSA:3.40.50.200 129 387 4.1E-90 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 Pfam PF00082 Subtilase family 152 379 1.8E-36 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 194 204 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 344 354 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 Gene3D G3DSA:3.30.70.80 30 116 1.7E-16 T 11-11-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 343 359 1.6E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 203 1.6E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS15035 ab50f6abff0fcfff145f8e923e93b5b1 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 152 171 1.6E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS19085 e11e4bfe0a347c1ae87bbd0663068283 490 SMART SM00316 37 123 5.7E-8 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS19085 e11e4bfe0a347c1ae87bbd0663068283 490 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 427 8.8E-167 T 11-11-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 S40542_RS19085 e11e4bfe0a347c1ae87bbd0663068283 490 Gene3D G3DSA:2.40.50.140 36 129 1.2E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19085 e11e4bfe0a347c1ae87bbd0663068283 490 SUPERFAMILY SSF50249 39 128 1.46E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19085 e11e4bfe0a347c1ae87bbd0663068283 490 Pfam PF10150 Ribonuclease E/G family 125 394 2.2E-104 T 11-11-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 S40542_RS19085 e11e4bfe0a347c1ae87bbd0663068283 490 Pfam PF00575 S1 RNA binding domain 38 110 5.6E-6 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 Gene3D G3DSA:1.10.1060.10 327 451 1.3E-19 T 11-11-2016 S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.9E-33 T 11-11-2016 IPR026902 RnfC Barrel sandwich hybrid domain S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 SUPERFAMILY SSF142019 95 303 4.97E-61 T 11-11-2016 S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 2.0E-188 T 11-11-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 SUPERFAMILY SSF46548 335 447 3.66E-21 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 727 233.896 T 11-11-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 5.6E-51 T 11-11-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 Pfam PF12838 4Fe-4S dicluster domain 376 429 5.9E-8 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain S40542_RS17380 2a68163554aad9f886e83afeb9429716 823 Pfam PF10531 SLBB domain 296 344 8.7E-11 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 4.6E-154 T 11-11-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 11-11-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 Gene3D G3DSA:3.40.50.720 170 303 5.5E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 SMART SM01002 149 297 7.3E-84 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 SUPERFAMILY SSF51735 137 303 2.52E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 Gene3D G3DSA:3.40.50.1770 1 169 3.2E-59 T 11-11-2016 S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.1E-47 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.8E-80 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 PIRSF PIRSF000183 1 371 2.0E-152 T 11-11-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 SUPERFAMILY SSF52283 305 360 1.11E-68 T 11-11-2016 S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 SUPERFAMILY SSF52283 1 137 1.11E-68 T 11-11-2016 S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 SMART SM01003 4 137 1.6E-80 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 3.1E-5 T 11-11-2016 S40542_RS11055 c0f8335874b7356c12236944a41f3955 373 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 3.1E-5 T 11-11-2016 S40542_RS17800 fd8624ff355b896d4d1e549ed33e3a7e 525 SUPERFAMILY SSF56317 222 481 1.18E-35 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS17800 fd8624ff355b896d4d1e549ed33e3a7e 525 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 14 500 21.196 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 S40542_RS17800 fd8624ff355b896d4d1e549ed33e3a7e 525 Pfam PF00795 Carbon-nitrogen hydrolase 229 481 1.7E-28 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS17800 fd8624ff355b896d4d1e549ed33e3a7e 525 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 67 459 1.1E-84 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 S40542_RS17800 fd8624ff355b896d4d1e549ed33e3a7e 525 Gene3D G3DSA:3.60.110.10 221 481 2.1E-21 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS04075 825b7d0ce9a6534ea51b14a427a87b9f 158 SUPERFAMILY SSF52540 26 151 1.53E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04075 825b7d0ce9a6534ea51b14a427a87b9f 158 Gene3D G3DSA:3.40.50.300 6 154 6.5E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04075 825b7d0ce9a6534ea51b14a427a87b9f 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 142 2.1E-48 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 S40542_RS04075 825b7d0ce9a6534ea51b14a427a87b9f 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 136 4.1E-41 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 S40542_RS00250 b5c6115c346a3ab397d3e223b56bd69e 537 SMART SM00267 347 521 2.0E-55 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00250 b5c6115c346a3ab397d3e223b56bd69e 537 Pfam PF03924 CHASE domain 83 264 1.9E-38 T 11-11-2016 IPR006189 CHASE domain S40542_RS00250 b5c6115c346a3ab397d3e223b56bd69e 537 SUPERFAMILY SSF55073 363 521 7.85E-43 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS00250 b5c6115c346a3ab397d3e223b56bd69e 537 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 516 3.1E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00250 b5c6115c346a3ab397d3e223b56bd69e 537 SMART SM01079 74 268 4.0E-41 T 11-11-2016 IPR006189 CHASE domain S40542_RS00250 b5c6115c346a3ab397d3e223b56bd69e 537 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 357 520 1.4E-42 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00250 b5c6115c346a3ab397d3e223b56bd69e 537 Gene3D G3DSA:3.30.70.270 360 522 3.8E-46 T 11-11-2016 S40542_RS08955 cb6791cbf729b59afe796c580c53adc9 428 SUPERFAMILY SSF51338 384 420 1.66E-11 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS08955 cb6791cbf729b59afe796c580c53adc9 428 SUPERFAMILY SSF51338 33 80 1.66E-11 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS08955 cb6791cbf729b59afe796c580c53adc9 428 Gene3D G3DSA:2.30.40.10 21 81 6.1E-26 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS08955 cb6791cbf729b59afe796c580c53adc9 428 Gene3D G3DSA:2.30.40.10 393 425 6.1E-26 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS08955 cb6791cbf729b59afe796c580c53adc9 428 Pfam PF01979 Amidohydrolase family 76 420 2.1E-50 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS08955 cb6791cbf729b59afe796c580c53adc9 428 SUPERFAMILY SSF51556 80 382 1.15E-103 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS08955 cb6791cbf729b59afe796c580c53adc9 428 Gene3D G3DSA:3.20.20.140 82 369 6.7E-91 T 11-11-2016 S40542_RS08955 cb6791cbf729b59afe796c580c53adc9 428 Gene3D G3DSA:2.30.40.10 370 392 1.6E-6 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS19685 a32b32d12bd45cfe157336f58b0ed8a1 246 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 7 241 39.521 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 S40542_RS19685 a32b32d12bd45cfe157336f58b0ed8a1 246 SUPERFAMILY SSF52402 22 206 3.01E-53 T 11-11-2016 S40542_RS19685 a32b32d12bd45cfe157336f58b0ed8a1 246 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 46 217 3.6E-53 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 S40542_RS19685 a32b32d12bd45cfe157336f58b0ed8a1 246 Gene3D G3DSA:3.40.50.620 9 214 6.6E-62 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS19685 a32b32d12bd45cfe157336f58b0ed8a1 246 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 32 240 2.2E-85 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 S40542_RS19685 a32b32d12bd45cfe157336f58b0ed8a1 246 PIRSF PIRSF000857 1 244 2.2E-57 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 S40542_RS19685 a32b32d12bd45cfe157336f58b0ed8a1 246 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 20 240 3.3E-87 T 11-11-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 S40542_RS18965 78f526cd0e88b76d76985e51a4b5df34 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 1.8E-181 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18965 78f526cd0e88b76d76985e51a4b5df34 421 SUPERFAMILY SSF55205 1 419 5.56E-143 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 S40542_RS18965 78f526cd0e88b76d76985e51a4b5df34 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 2.0E-116 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 S40542_RS18965 78f526cd0e88b76d76985e51a4b5df34 421 Gene3D G3DSA:3.65.10.10 21 222 1.9E-70 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 S40542_RS18965 78f526cd0e88b76d76985e51a4b5df34 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 46.473 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18965 78f526cd0e88b76d76985e51a4b5df34 421 Gene3D G3DSA:3.65.10.10 223 419 2.6E-58 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 S40542_RS01410 a4e14cbd3444c4420836ffd6a9a98037 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 3.7E-34 T 11-11-2016 IPR023214 HAD-like domain S40542_RS01410 a4e14cbd3444c4420836ffd6a9a98037 224 Gene3D G3DSA:3.40.50.1000 92 219 7.0E-38 T 11-11-2016 IPR023214 HAD-like domain S40542_RS01410 a4e14cbd3444c4420836ffd6a9a98037 224 Gene3D G3DSA:3.40.50.1000 1 17 7.0E-38 T 11-11-2016 IPR023214 HAD-like domain S40542_RS01410 a4e14cbd3444c4420836ffd6a9a98037 224 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 6 214 2.4E-51 T 11-11-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 S40542_RS01410 a4e14cbd3444c4420836ffd6a9a98037 224 SUPERFAMILY SSF56784 2 218 6.17E-52 T 11-11-2016 IPR023214 HAD-like domain S40542_RS01410 a4e14cbd3444c4420836ffd6a9a98037 224 Gene3D G3DSA:1.10.150.240 20 86 7.6E-16 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 S40542_RS01410 a4e14cbd3444c4420836ffd6a9a98037 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 182 2.2E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS01410 a4e14cbd3444c4420836ffd6a9a98037 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 189 2.5E-14 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 3.7E-43 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 PRINTS PR00173 Glutamate-aspartate symporter signature 309 335 3.7E-43 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.7E-43 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 PRINTS PR00173 Glutamate-aspartate symporter signature 371 391 3.7E-43 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 PRINTS PR00173 Glutamate-aspartate symporter signature 344 363 3.7E-43 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 PRINTS PR00173 Glutamate-aspartate symporter signature 242 261 3.7E-43 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 PRINTS PR00173 Glutamate-aspartate symporter signature 97 122 3.7E-43 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 SUPERFAMILY SSF118215 9 418 1.2E-120 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 Pfam PF00375 Sodium:dicarboxylate symporter family 9 416 3.7E-129 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS11440 3a279249fa6f47ccb5e2bd7ec465535d 444 Gene3D G3DSA:1.10.3860.10 5 422 5.2E-131 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS00820 d203f5e288f547180994427f69a94d62 395 Pfam PF00924 Mechanosensitive ion channel 150 380 5.3E-39 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 S40542_RS00820 d203f5e288f547180994427f69a94d62 395 Gene3D G3DSA:2.30.30.60 209 257 6.6E-10 T 11-11-2016 S40542_RS00820 d203f5e288f547180994427f69a94d62 395 SUPERFAMILY SSF50182 190 257 1.28E-11 T 11-11-2016 IPR010920 LSM domain S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 SMART SM00481 4 73 7.1E-10 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 Pfam PF01336 OB-fold nucleic acid binding domain 932 1001 3.7E-8 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 Pfam PF14579 Helix-hairpin-helix motif 768 854 1.6E-14 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 Pfam PF02811 PHP domain 8 98 1.2E-10 T 11-11-2016 IPR004013 PHP domain GO:0003824 S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 268 693 9.3E-147 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 SUPERFAMILY SSF89550 10 66 2.55E-5 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 967 4.0E-161 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 Gene3D G3DSA:2.40.50.140 920 997 3.2E-4 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 Gene3D G3DSA:3.20.20.140 10 67 3.4E-4 T 11-11-2016 S40542_RS16280 0100a10d46ff649d0f1a8b5a1de66f8d 1022 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1022 13.067 T 11-11-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SUPERFAMILY SSF49899 1879 2058 5.87E-28 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SUPERFAMILY SSF49313 1122 1220 2.71E-11 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00560 2113 2257 4.7E-4 T 11-11-2016 IPR006558 LamG-like jellyroll fold S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Pfam PF00028 Cadherin domain 364 426 6.3E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Pfam PF00028 Cadherin domain 1130 1219 9.3E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SUPERFAMILY SSF69318 434 619 2.75E-23 T 11-11-2016 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Gene3D G3DSA:2.60.40.60 1121 1222 5.1E-13 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Gene3D G3DSA:2.60.40.60 364 432 4.3E-13 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SUPERFAMILY SSF49899 2046 2261 1.58E-32 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00112 353 434 2.8E-10 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00112 1145 1226 1.7E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Gene3D G3DSA:2.60.120.200 1869 2039 7.9E-23 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Gene3D G3DSA:2.60.120.200 2048 2261 5.1E-35 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00191 445 510 2.3E-11 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00191 684 739 16.0 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00191 522 579 7.2E-12 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00191 841 895 1.2E-5 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00191 907 967 2.1E-4 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SMART SM00191 594 668 0.9 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Gene3D G3DSA:2.130.10.130 433 620 3.6E-28 T 11-11-2016 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Gene3D G3DSA:2.130.10.130 850 929 1.2E-17 T 11-11-2016 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Gene3D G3DSA:2.130.10.130 647 787 1.2E-17 T 11-11-2016 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SUPERFAMILY SSF69318 591 960 3.66E-23 T 11-11-2016 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 SUPERFAMILY SSF49313 359 432 3.43E-12 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Pfam PF01839 FG-GAP repeat 847 878 1.8E-7 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Pfam PF01839 FG-GAP repeat 450 481 1.7E-7 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Pfam PF01839 FG-GAP repeat 527 564 2.8E-6 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Pfam PF01839 FG-GAP repeat 915 950 8.4E-5 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 2092 2259 4.1E-26 T 11-11-2016 S40542_RS18865 95b8d54f623008f66853401d4f244a5d 2388 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1890 2037 1.8E-22 T 11-11-2016 S40542_RS10685 dab32b421f58d371352d227489cf9004 854 SMART SM00052 583 828 3.5E-87 T 11-11-2016 IPR001633 EAL domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 Pfam PF00563 EAL domain 589 822 4.6E-68 T 11-11-2016 IPR001633 EAL domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 Gene3D G3DSA:3.20.20.450 587 835 5.8E-81 T 11-11-2016 IPR001633 EAL domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 SUPERFAMILY SSF55785 292 399 8.55E-30 T 11-11-2016 IPR000014 PAS domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 Gene3D G3DSA:3.30.70.270 414 579 5.4E-46 T 11-11-2016 S40542_RS10685 dab32b421f58d371352d227489cf9004 854 SMART SM00091 287 353 6.9E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 Pfam PF00990 Diguanylate cyclase, GGDEF domain 412 567 3.1E-37 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 SUPERFAMILY SSF55073 417 575 3.69E-40 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS10685 dab32b421f58d371352d227489cf9004 854 SMART SM00267 401 573 2.9E-44 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 409 572 3.3E-38 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 291 408 7.2E-26 T 11-11-2016 IPR000014 PAS domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 SMART SM00086 359 401 2.2E-7 T 11-11-2016 IPR001610 PAC motif S40542_RS10685 dab32b421f58d371352d227489cf9004 854 Gene3D G3DSA:3.30.450.20 296 400 1.4E-29 T 11-11-2016 S40542_RS10685 dab32b421f58d371352d227489cf9004 854 SUPERFAMILY SSF141868 589 836 8.76E-77 T 11-11-2016 IPR001633 EAL domain S40542_RS10685 dab32b421f58d371352d227489cf9004 854 Pfam PF13426 PAS domain 298 400 1.2E-19 T 11-11-2016 IPR000014 PAS domain S40542_RS15070 e9003ed6f78075333950ae3cbb90071a 307 SUPERFAMILY SSF103481 202 303 3.4E-11 T 11-11-2016 S40542_RS15070 e9003ed6f78075333950ae3cbb90071a 307 SUPERFAMILY SSF103481 48 150 2.35E-10 T 11-11-2016 S40542_RS15070 e9003ed6f78075333950ae3cbb90071a 307 Pfam PF00892 EamA-like transporter family 16 150 7.7E-17 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS15070 e9003ed6f78075333950ae3cbb90071a 307 Pfam PF00892 EamA-like transporter family 164 300 7.6E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS04920 3029619d2003e7200a8ba34441c97c5e 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 106.642 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 S40542_RS04920 3029619d2003e7200a8ba34441c97c5e 428 Pfam PF00202 Aminotransferase class-III 32 397 3.3E-76 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 S40542_RS04920 3029619d2003e7200a8ba34441c97c5e 428 Gene3D G3DSA:3.90.1150.10 4 69 1.1E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS04920 3029619d2003e7200a8ba34441c97c5e 428 Gene3D G3DSA:3.90.1150.10 319 425 1.1E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS04920 3029619d2003e7200a8ba34441c97c5e 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 1.8E-195 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 S40542_RS04920 3029619d2003e7200a8ba34441c97c5e 428 Gene3D G3DSA:3.40.640.10 70 316 7.6E-82 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS04920 3029619d2003e7200a8ba34441c97c5e 428 SUPERFAMILY SSF53383 2 425 7.06E-135 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS04920 3029619d2003e7200a8ba34441c97c5e 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 S40542_RS12770 3491f673cd54ec1fba9c4f6c1f73a633 670 Pfam PF00144 Beta-lactamase 60 386 2.0E-58 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS12770 3491f673cd54ec1fba9c4f6c1f73a633 670 Gene3D G3DSA:3.40.710.10 57 404 2.5E-70 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS12770 3491f673cd54ec1fba9c4f6c1f73a633 670 SUPERFAMILY SSF56601 57 388 5.97E-69 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS08740 e3aace4e9d657b03bce980d944c5f220 142 SUPERFAMILY SSF54631 1 124 8.34E-30 T 11-11-2016 S40542_RS08740 e3aace4e9d657b03bce980d944c5f220 142 SMART SM00116 80 128 2.3E-5 T 11-11-2016 IPR000644 CBS domain S40542_RS08740 e3aace4e9d657b03bce980d944c5f220 142 SMART SM00116 13 61 0.63 T 11-11-2016 IPR000644 CBS domain S40542_RS08740 e3aace4e9d657b03bce980d944c5f220 142 Pfam PF00571 CBS domain 6 61 6.4E-7 T 11-11-2016 IPR000644 CBS domain S40542_RS08740 e3aace4e9d657b03bce980d944c5f220 142 Pfam PF00571 CBS domain 73 127 7.6E-14 T 11-11-2016 IPR000644 CBS domain S40542_RS08740 e3aace4e9d657b03bce980d944c5f220 142 Gene3D G3DSA:3.10.580.10 1 137 2.2E-31 T 11-11-2016 S40542_RS08720 1217bb18f514d556ac195f9b622b73bb 506 PIRSF PIRSF011396 1 503 5.9E-150 T 11-11-2016 IPR006905 Tryptophan halogenase S40542_RS08720 1217bb18f514d556ac195f9b622b73bb 506 SUPERFAMILY SSF51905 2 87 7.56E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08720 1217bb18f514d556ac195f9b622b73bb 506 SUPERFAMILY SSF51905 320 422 7.56E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08720 1217bb18f514d556ac195f9b622b73bb 506 SUPERFAMILY SSF51905 142 232 7.56E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08720 1217bb18f514d556ac195f9b622b73bb 506 Gene3D G3DSA:3.50.50.60 151 230 1.1E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08720 1217bb18f514d556ac195f9b622b73bb 506 Gene3D G3DSA:3.50.50.60 315 359 1.1E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08720 1217bb18f514d556ac195f9b622b73bb 506 Gene3D G3DSA:3.50.50.60 2 72 1.1E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08720 1217bb18f514d556ac195f9b622b73bb 506 Pfam PF04820 Tryptophan halogenase 4 457 1.6E-126 T 11-11-2016 IPR006905 Tryptophan halogenase S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 74 90 - T 11-11-2016 IPR033693 Pyroglutamyl peptidase I, Glu active site S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 PIRSF PIRSF015592 6 218 1.0E-83 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 SUPERFAMILY SSF53182 8 219 1.09E-70 T 11-11-2016 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 7 206 39.006 T 11-11-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 Pfam PF01470 Pyroglutamyl peptidase 9 207 2.7E-79 T 11-11-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 135 149 - T 11-11-2016 IPR033694 Pyroglutamyl peptidase I, Cys active site S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 9 218 3.1E-79 T 11-11-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 9 32 3.1E-48 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 67 79 3.1E-48 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 85 105 3.1E-48 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 137 153 3.1E-48 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 167 179 3.1E-48 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 S40542_RS10190 dcd56c3c1b20627a5d6084e89534fc66 220 Gene3D G3DSA:3.40.630.20 6 215 3.3E-68 T 11-11-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like S40542_RS20300 ea792287483db50e06a2d6abd5996ff3 250 SMART SM00849 10 209 3.8E-14 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS20300 ea792287483db50e06a2d6abd5996ff3 250 Gene3D G3DSA:3.60.15.10 3 215 1.7E-30 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS20300 ea792287483db50e06a2d6abd5996ff3 250 SUPERFAMILY SSF56281 3 218 3.8E-32 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS20300 ea792287483db50e06a2d6abd5996ff3 250 Pfam PF00753 Metallo-beta-lactamase superfamily 11 202 1.8E-13 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 3 564 68.527 T 11-11-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 SMART SM01274 80 260 7.2E-106 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 Pfam PF03949 Malic enzyme, NAD binding domain 270 529 2.2E-98 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 SUPERFAMILY SSF51735 270 561 3.57E-95 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 SMART SM00919 270 530 2.0E-128 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 Gene3D G3DSA:3.40.50.720 268 561 4.1E-107 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 PRINTS PR00072 Malic enzyme signature 266 282 1.8E-73 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 PRINTS PR00072 Malic enzyme signature 86 110 1.8E-73 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 PRINTS PR00072 Malic enzyme signature 146 175 1.8E-73 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 PRINTS PR00072 Malic enzyme signature 182 204 1.8E-73 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 PRINTS PR00072 Malic enzyme signature 297 313 1.8E-73 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 PRINTS PR00072 Malic enzyme signature 241 259 1.8E-73 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 PRINTS PR00072 Malic enzyme signature 407 423 1.8E-73 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 PIRSF PIRSF000106 1 562 3.8E-230 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 ProSitePatterns PS00331 Malic enzymes signature. 266 282 - T 11-11-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 Gene3D G3DSA:3.40.50.10380 15 267 1.2E-118 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 Pfam PF00390 Malic enzyme, N-terminal domain 80 260 2.1E-78 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 S40542_RS10290 e0ad4aa62f43883b0c428495626683a2 564 SUPERFAMILY SSF53223 3 269 6.98E-112 T 11-11-2016 S40542_RS01630 833471ec7f1500dc1c76a80a82c122dc 265 SUPERFAMILY SSF110399 8 247 4.05E-82 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 S40542_RS01630 833471ec7f1500dc1c76a80a82c122dc 265 Pfam PF05690 Thiazole biosynthesis protein ThiG 11 255 7.0E-103 T 11-11-2016 S40542_RS01630 833471ec7f1500dc1c76a80a82c122dc 265 Hamap MF_00443 Thiazole synthase [thiG]. 8 261 41.701 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 S40542_RS01630 833471ec7f1500dc1c76a80a82c122dc 265 Gene3D G3DSA:3.20.20.70 10 264 6.6E-52 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS18635 61dbf38229331cc81a3c10589bddf80b 278 SUPERFAMILY SSF53448 3 223 4.85E-61 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18635 61dbf38229331cc81a3c10589bddf80b 278 Pfam PF00535 Glycosyl transferase family 2 6 160 8.4E-28 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 S40542_RS18635 61dbf38229331cc81a3c10589bddf80b 278 Gene3D G3DSA:3.90.550.10 3 223 3.5E-59 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 SUPERFAMILY SSF52218 64 207 1.38E-45 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 Gene3D G3DSA:2.40.30.10 235 287 2.5E-38 T 11-11-2016 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 Gene3D G3DSA:2.40.30.10 390 461 2.5E-38 T 11-11-2016 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 532 548 1.6E-27 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 555 563 1.6E-27 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 277 287 1.6E-27 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 426 435 1.6E-27 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 488 497 1.6E-27 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 501 512 1.6E-27 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 393 400 1.6E-27 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 463 482 1.6E-27 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 Pfam PF00258 Flavodoxin 68 199 6.9E-33 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 Pfam PF00667 FAD binding domain 239 431 4.8E-27 T 11-11-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 Gene3D G3DSA:3.40.50.80 462 605 8.9E-59 T 11-11-2016 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00369 Flavodoxin signature 171 190 1.0E-13 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00369 Flavodoxin signature 115 126 1.0E-13 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00369 Flavodoxin signature 67 80 1.0E-13 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PRINTS PR00369 Flavodoxin signature 147 157 1.0E-13 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 PIRSF PIRSF000207 1 606 7.1E-261 T 11-11-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 Pfam PF00175 Oxidoreductase NAD-binding domain 464 570 4.0E-18 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 SUPERFAMILY SSF63380 235 453 1.22E-62 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 606 6.3E-246 T 11-11-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 Gene3D G3DSA:3.40.50.360 59 210 8.9E-48 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 Gene3D G3DSA:1.20.990.10 288 389 4.4E-32 T 11-11-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 S40542_RS19695 903f5f7fd36898d2c85bab6d4bb85235 606 SUPERFAMILY SSF52343 451 606 7.2E-50 T 11-11-2016 S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.3E-13 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.3E-13 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.3E-13 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 Gene3D G3DSA:1.10.10.10 5 55 2.4E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 3.0E-19 T 11-11-2016 S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 141 6.8E-16 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 Gene3D G3DSA:3.30.70.920 56 139 8.9E-25 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 SUPERFAMILY SSF46785 3 63 4.62E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 SMART SM00344 3 112 6.0E-39 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 S40542_RS11340 179ec1007764b5408c0d3936ef68f8a5 153 SUPERFAMILY SSF54909 63 152 5.77E-18 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SMART SM00091 517 583 7.0E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SMART SM00091 643 709 1.5E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SMART SM00091 392 458 2.1 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SMART SM00091 267 334 1.4 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SUPERFAMILY SSF55785 502 629 9.25E-18 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Pfam PF00072 Response regulator receiver domain 1023 1132 3.8E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Pfam PF00512 His Kinase A (phospho-acceptor) domain 776 841 1.1E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 887 997 1.9E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Gene3D G3DSA:3.30.565.10 847 998 6.5E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SMART SM00387 883 1000 1.3E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SUPERFAMILY SSF55874 847 997 3.01E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SUPERFAMILY SSF52172 1019 1136 1.71E-28 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Pfam PF08448 PAS fold 524 632 3.4E-11 T 11-11-2016 IPR013656 PAS fold-4 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Gene3D G3DSA:3.30.450.20 503 629 4.7E-19 T 11-11-2016 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Gene3D G3DSA:3.30.450.20 636 757 1.7E-16 T 11-11-2016 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Gene3D G3DSA:3.30.450.20 384 502 3.6E-12 T 11-11-2016 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SMART SM00448 1021 1132 1.3E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Gene3D G3DSA:3.40.50.2300 1019 1137 2.6E-28 T 11-11-2016 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SMART SM00388 776 842 8.8E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SUPERFAMILY SSF55785 654 770 2.74E-20 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Pfam PF00989 PAS fold 645 740 9.9E-10 T 11-11-2016 IPR013767 PAS fold GO:0006355 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 514 634 5.9E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 390 509 2.0E-7 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 648 768 1.4E-17 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Gene3D G3DSA:3.30.450.20 263 364 4.7E-6 T 11-11-2016 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Pfam PF13426 PAS domain 402 504 2.3E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SUPERFAMILY SSF55785 256 337 6.47E-6 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SUPERFAMILY SSF55785 383 503 7.15E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 PRINTS PR00344 Bacterial sensor protein C-terminal signature 931 945 1.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 979 1.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 PRINTS PR00344 Bacterial sensor protein C-terminal signature 984 997 1.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 PRINTS PR00344 Bacterial sensor protein C-terminal signature 949 959 1.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 SUPERFAMILY SSF47384 771 841 8.24E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Gene3D G3DSA:1.10.287.130 773 838 0.001 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07960 a4d28a050fd04cfb4d02515a7688d026 1138 Pfam PF13188 PAS domain 268 300 0.02 T 11-11-2016 IPR000014 PAS domain S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 SUPERFAMILY SSF57783 752 815 7.48E-19 T 11-11-2016 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 SUPERFAMILY SSF57783 708 751 2.21E-6 T 11-11-2016 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:2.20.25.10 817 873 2.3E-29 T 11-11-2016 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 SMART SM00493 3 141 4.3E-27 T 11-11-2016 IPR006171 Toprim domain S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 717 753 5.7E-10 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 606 631 0.0015 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 331 - T 11-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Pfam PF01131 DNA topoisomerase 166 574 4.4E-129 T 11-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 SUPERFAMILY SSF57783 817 873 1.87E-21 T 11-11-2016 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 SMART SM00436 142 230 1.4E-47 T 11-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 731 54.552 T 11-11-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 642 1.2E-245 T 11-11-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Pfam PF01751 Toprim domain 5 151 3.9E-31 T 11-11-2016 IPR006171 Toprim domain S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:3.30.65.10 601 640 3.7E-10 T 11-11-2016 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:3.30.65.10 752 814 4.6E-25 T 11-11-2016 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:3.30.65.10 715 751 9.1E-10 T 11-11-2016 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:3.40.50.140 1 171 2.2E-56 T 11-11-2016 IPR006171 Toprim domain S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:1.10.460.10 483 587 3.3E-57 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:1.10.460.10 173 220 3.3E-57 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 SMART SM00437 280 536 5.3E-120 T 11-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Pfam PF08272 Topoisomerase I zinc-ribbon-like 832 871 4.7E-19 T 11-11-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Pfam PF08272 Topoisomerase I zinc-ribbon-like 766 801 1.2E-12 T 11-11-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 200 218 5.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 499 513 5.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 115 128 5.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 398 414 5.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 5.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:2.70.20.10 222 341 4.8E-30 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 Gene3D G3DSA:2.70.20.10 346 482 3.4E-33 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 S40542_RS11430 4dca3f7304b109d03dcd77d845211990 877 SUPERFAMILY SSF56712 3 618 5.62E-201 T 11-11-2016 IPR023405 DNA topoisomerase, type IA, core domain S40542_RS17565 d458ae208b3100e0bc074825c52860d6 241 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 3 240 26.208 T 11-11-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 S40542_RS17565 d458ae208b3100e0bc074825c52860d6 241 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 9 222 5.1E-35 T 11-11-2016 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 SUPERFAMILY SSF52242 393 543 8.11E-46 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 Pfam PF00809 Pterin binding enzyme 12 250 1.4E-59 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 Gene3D G3DSA:3.10.196.10 608 874 9.2E-109 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 Pfam PF02607 B12 binding domain 309 382 8.8E-24 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 SMART SM01018 307 390 5.6E-42 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 SUPERFAMILY SSF56507 552 874 5.36E-127 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 SUPERFAMILY SSF51717 8 281 1.7E-89 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 SUPERFAMILY SSF47644 302 389 2.35E-27 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 Pfam PF02310 B12 binding domain 398 493 3.0E-20 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 Gene3D G3DSA:1.10.1240.10 300 387 9.9E-38 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 Gene3D G3DSA:3.20.20.20 8 287 1.5E-115 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 589 856 1.0E-119 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 Gene3D G3DSA:3.40.50.280 395 544 5.3E-65 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 PIRSF PIRSF000381 1 844 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS16360 537930d91f336e7a9247cb5cbb32fec3 875 TIGRFAM TIGR02082 metH: methionine synthase 5 841 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 SUPERFAMILY SSF54913 1 112 4.45E-44 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 SMART SM00938 4 105 3.6E-65 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-48 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 PIRSF PIRSF039144 1 112 3.6E-54 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.4E-42 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS04900 5bb4b0a7ed332ab228ccf049de364605 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS13975 2753df7ed32a58c35ba171cb61a095bd 275 Gene3D G3DSA:3.40.50.1820 35 265 4.2E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13975 2753df7ed32a58c35ba171cb61a095bd 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 87 2.7E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS13975 2753df7ed32a58c35ba171cb61a095bd 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 2.7E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS13975 2753df7ed32a58c35ba171cb61a095bd 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 2.7E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS13975 2753df7ed32a58c35ba171cb61a095bd 275 Pfam PF00561 alpha/beta hydrolase fold 48 151 8.2E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS13975 2753df7ed32a58c35ba171cb61a095bd 275 SUPERFAMILY SSF53474 27 263 3.85E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS06150 97ed15514e642cc243ded34efe537694 136 Pfam PF03646 FlaG protein 40 133 1.4E-18 T 11-11-2016 IPR005186 FlaG protein S40542_RS06150 97ed15514e642cc243ded34efe537694 136 Gene3D G3DSA:3.30.160.170 43 131 1.9E-17 T 11-11-2016 IPR005186 FlaG protein S40542_RS06150 97ed15514e642cc243ded34efe537694 136 SUPERFAMILY SSF160214 43 135 3.4E-19 T 11-11-2016 IPR005186 FlaG protein S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 Pfam PF09112 Peptide-N-glycosidase F, N terminal 39 145 3.8E-6 T 11-11-2016 IPR015196 Peptide-N-glycosidase F, N-terminal S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 SUPERFAMILY SSF49742 183 335 3.92E-19 T 11-11-2016 IPR008977 PHM/PNGase F domain GO:0003824 S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 SMART SM00495 561 607 1.3E-7 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 SUPERFAMILY SSF51055 552 611 7.46E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 Gene3D G3DSA:2.60.120.230 55 143 1.2E-7 T 11-11-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 Pfam PF09113 Peptide-N-glycosidase F, C terminal 192 307 3.8E-15 T 11-11-2016 IPR015197 Peptide-N-glycosidase F, C-terminal S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 Pfam PF02839 Carbohydrate binding domain 562 604 2.6E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 Gene3D G3DSA:2.60.120.230 190 334 3.9E-21 T 11-11-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 S40542_RS08060 49616cbcbc5d3d5aad306bc22b2cdba3 615 Gene3D G3DSA:2.10.10.20 559 610 1.9E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS03625 1b7dc89584814fa8fe93e70e4eda849f 168 SUPERFAMILY SSF55083 1 157 1.31E-52 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS03625 1b7dc89584814fa8fe93e70e4eda849f 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 3.9E-43 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS03625 1b7dc89584814fa8fe93e70e4eda849f 168 Gene3D G3DSA:3.30.70.560 3 155 2.3E-55 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS03625 1b7dc89584814fa8fe93e70e4eda849f 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.0E-34 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS03625 1b7dc89584814fa8fe93e70e4eda849f 168 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS02110 4eca122b35d6756641e102f3aa29f139 402 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 399 5.9E-66 T 11-11-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 S40542_RS02110 4eca122b35d6756641e102f3aa29f139 402 PIRSF PIRSF015761 3 402 4.4E-38 T 11-11-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 S40542_RS02110 4eca122b35d6756641e102f3aa29f139 402 Pfam PF12693 GspL periplasmic domain 247 399 3.4E-28 T 11-11-2016 IPR025691 GspL periplasmic domain S40542_RS02110 4eca122b35d6756641e102f3aa29f139 402 SUPERFAMILY SSF53067 2 148 1.42E-30 T 11-11-2016 S40542_RS02110 4eca122b35d6756641e102f3aa29f139 402 SUPERFAMILY SSF53067 152 237 9.71E-16 T 11-11-2016 S40542_RS02110 4eca122b35d6756641e102f3aa29f139 402 Pfam PF05134 Type II secretion system (T2SS), protein L 5 240 3.0E-42 T 11-11-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain S40542_RS18290 4301c1b86f86d151ec6110240a8b9afb 349 SUPERFAMILY SSF111369 57 274 2.22E-38 T 11-11-2016 S40542_RS18290 4301c1b86f86d151ec6110240a8b9afb 349 Gene3D G3DSA:2.40.50.100 163 194 3.2E-11 T 11-11-2016 S40542_RS18290 4301c1b86f86d151ec6110240a8b9afb 349 Gene3D G3DSA:2.40.50.100 69 102 3.2E-11 T 11-11-2016 S40542_RS18290 4301c1b86f86d151ec6110240a8b9afb 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 268 2.0E-32 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS18290 4301c1b86f86d151ec6110240a8b9afb 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 347 1.6E-76 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 Gene3D G3DSA:3.30.300.30 620 663 1.9E-7 T 11-11-2016 S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 SUPERFAMILY SSF52777 2 210 3.56E-33 T 11-11-2016 S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 Pfam PF13745 HxxPF-repeated domain 94 187 1.2E-9 T 11-11-2016 S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 Pfam PF00501 AMP-binding enzyme 238 622 1.2E-62 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 SUPERFAMILY SSF56801 226 657 5.36E-90 T 11-11-2016 S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 ProSitePatterns PS00455 Putative AMP-binding domain signature. 375 386 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 Gene3D G3DSA:3.40.50.980 232 380 8.7E-30 T 11-11-2016 S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 Pfam PF00668 Condensation domain 2 68 2.4E-13 T 11-11-2016 IPR001242 Condensation domain S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 Gene3D G3DSA:2.30.38.10 534 616 2.8E-20 T 11-11-2016 S40542_RS21530 187f17f30ab6e54eeb4957ce8b399da4 663 Gene3D G3DSA:3.40.50.980 381 533 8.2E-32 T 11-11-2016 S40542_RS16370 61d09be3e99f247027578502d4ff1742 315 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 48.938 T 11-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 S40542_RS16370 61d09be3e99f247027578502d4ff1742 315 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 5.2E-123 T 11-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 S40542_RS16370 61d09be3e99f247027578502d4ff1742 315 Gene3D G3DSA:3.40.50.880 34 300 3.9E-112 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS16370 61d09be3e99f247027578502d4ff1742 315 PIRSF PIRSF000450 1 309 1.4E-133 T 11-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 S40542_RS16370 61d09be3e99f247027578502d4ff1742 315 Pfam PF04204 Homoserine O-succinyltransferase 2 299 8.9E-126 T 11-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 S40542_RS16370 61d09be3e99f247027578502d4ff1742 315 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-110 T 11-11-2016 S40542_RS16370 61d09be3e99f247027578502d4ff1742 315 SUPERFAMILY SSF52317 18 297 4.58E-92 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SUPERFAMILY SSF52172 928 1056 1.99E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Gene3D G3DSA:3.30.565.10 598 772 4.3E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Pfam PF08448 PAS fold 419 527 3.7E-8 T 11-11-2016 IPR013656 PAS fold-4 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Gene3D G3DSA:3.30.450.20 402 526 7.2E-11 T 11-11-2016 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SUPERFAMILY SSF47384 531 612 4.32E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SUPERFAMILY SSF47226 1073 1158 1.96E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SUPERFAMILY SSF47226 1026 1039 1.96E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SMART SM00448 791 904 1.9E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SMART SM00448 930 1043 3.6E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Pfam PF01627 Hpt domain 1094 1172 1.7E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Gene3D G3DSA:3.40.50.2300 927 1047 7.5E-38 T 11-11-2016 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Gene3D G3DSA:3.40.50.2300 790 909 3.2E-23 T 11-11-2016 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SUPERFAMILY SSF52172 788 908 6.97E-25 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Pfam PF00072 Response regulator receiver domain 794 903 6.3E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Pfam PF00072 Response regulator receiver domain 932 1043 5.2E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Gene3D G3DSA:1.20.120.160 1071 1171 8.0E-10 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Pfam PF00512 His Kinase A (phospho-acceptor) domain 547 611 9.6E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SMART SM00387 658 774 1.4E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SUPERFAMILY SSF55781 246 392 6.17E-5 T 11-11-2016 IPR029016 GAF domain-like S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 658 772 1.6E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 Gene3D G3DSA:1.10.287.130 538 597 1.0E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SUPERFAMILY SSF55785 400 524 7.04E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SMART SM00388 546 611 1.1E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 SUPERFAMILY SSF55874 600 772 7.73E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 752 6.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 PRINTS PR00344 Bacterial sensor protein C-terminal signature 699 713 6.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 727 6.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08995 89d16cfa075aed7994a21bba692efa04 1256 PRINTS PR00344 Bacterial sensor protein C-terminal signature 758 771 6.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13795 3041772b26379da6c0dddda0353d9225 159 Pfam PF01575 MaoC like domain 19 112 2.9E-18 T 11-11-2016 IPR002539 MaoC-like domain S40542_RS13795 3041772b26379da6c0dddda0353d9225 159 Gene3D G3DSA:3.10.129.10 9 138 9.1E-33 T 11-11-2016 IPR029069 HotDog domain S40542_RS13795 3041772b26379da6c0dddda0353d9225 159 SUPERFAMILY SSF54637 6 142 2.64E-31 T 11-11-2016 IPR029069 HotDog domain S40542_RS04050 74da9cf0e3a4363865099e5f43b5895a 172 Pfam PF00255 Glutathione peroxidase 25 126 1.7E-26 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS04050 74da9cf0e3a4363865099e5f43b5895a 172 ProSitePatterns PS00460 Glutathione peroxidases active site. 41 56 - T 11-11-2016 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 S40542_RS04050 74da9cf0e3a4363865099e5f43b5895a 172 SUPERFAMILY SSF52833 19 170 3.03E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS04050 74da9cf0e3a4363865099e5f43b5895a 172 Gene3D G3DSA:3.40.30.10 20 171 2.9E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS04050 74da9cf0e3a4363865099e5f43b5895a 172 PIRSF PIRSF000303 2 172 1.4E-54 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS04050 74da9cf0e3a4363865099e5f43b5895a 172 PRINTS PR01011 Glutathione peroxidase family signature 74 90 7.8E-11 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS04050 74da9cf0e3a4363865099e5f43b5895a 172 PRINTS PR01011 Glutathione peroxidase family signature 39 56 7.8E-11 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS04050 74da9cf0e3a4363865099e5f43b5895a 172 PRINTS PR01011 Glutathione peroxidase family signature 133 142 7.8E-11 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 SUPERFAMILY SSF52743 48 447 6.81E-56 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 137 147 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 93 104 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 Gene3D G3DSA:2.60.120.260 596 613 1.1E-27 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 Gene3D G3DSA:2.60.120.260 479 561 1.1E-27 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 SUPERFAMILY SSF49785 601 613 6.38E-23 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 SUPERFAMILY SSF49785 471 566 6.38E-23 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 Pfam PF00082 Subtilase family 88 433 1.0E-34 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 88 107 1.8E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 133 146 1.8E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 PRINTS PR00723 Subtilisin serine protease family (S8) signature 362 378 1.8E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 Gene3D G3DSA:3.40.50.200 46 448 7.4E-63 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS08840 674879d3d6cb44f901d7c56ea402c418 613 Pfam PF01483 Proprotein convertase P-domain 491 564 1.7E-18 T 11-11-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 S40542_RS18490 36556cd3f861ed493bdb7a9772c1bc90 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 3.1E-82 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 S40542_RS18490 36556cd3f861ed493bdb7a9772c1bc90 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 7.8E-75 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 S40542_RS18490 36556cd3f861ed493bdb7a9772c1bc90 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 7.0E-70 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 S40542_RS18490 36556cd3f861ed493bdb7a9772c1bc90 181 SUPERFAMILY SSF51182 2 178 1.99E-76 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS18490 36556cd3f861ed493bdb7a9772c1bc90 181 Gene3D G3DSA:2.60.120.10 2 179 2.9E-81 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 7.3E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 7.3E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 160 175 7.3E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 SMART SM01358 32 270 2.0E-20 T 11-11-2016 IPR032255 Helical bimodular sensor domain S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 Gene3D G3DSA:1.10.287.950 379 594 7.6E-59 T 11-11-2016 S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 SMART SM00283 364 625 9.1E-76 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 SUPERFAMILY SSF58104 318 626 3.01E-76 T 11-11-2016 S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 Pfam PF00672 HAMP domain 277 342 7.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 435 624 4.6E-51 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS01290 4625b93f7173a5fab4625b42284badd5 626 SMART SM00304 296 349 5.0E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02700 317c1409a0e48263fb590fcd500771c8 111 Gene3D G3DSA:3.40.50.270 1 38 1.7E-7 T 11-11-2016 S40542_RS02700 317c1409a0e48263fb590fcd500771c8 111 Gene3D G3DSA:3.40.50.270 40 94 7.8E-4 T 11-11-2016 S40542_RS02700 317c1409a0e48263fb590fcd500771c8 111 SUPERFAMILY SSF52788 1 100 9.94E-20 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS02700 317c1409a0e48263fb590fcd500771c8 111 SMART SM00226 2 108 0.0019 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS02700 317c1409a0e48263fb590fcd500771c8 111 PIRSF PIRSF029416 1 109 1.0E-44 T 11-11-2016 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 S40542_RS01575 2aac6c8676ecf620df0b32a437f8a4b6 342 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 341 2.3E-150 T 11-11-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 S40542_RS01575 2aac6c8676ecf620df0b32a437f8a4b6 342 SUPERFAMILY SSF55729 1 341 2.67E-137 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01575 2aac6c8676ecf620df0b32a437f8a4b6 342 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 341 4.4E-144 T 11-11-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 S40542_RS01575 2aac6c8676ecf620df0b32a437f8a4b6 342 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 340 3.0E-146 T 11-11-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 S40542_RS01575 2aac6c8676ecf620df0b32a437f8a4b6 342 Gene3D G3DSA:3.40.630.30 110 155 1.1E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01575 2aac6c8676ecf620df0b32a437f8a4b6 342 Gene3D G3DSA:3.40.630.30 225 250 1.1E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01575 2aac6c8676ecf620df0b32a437f8a4b6 342 Gene3D G3DSA:3.40.630.30 1 75 1.1E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01575 2aac6c8676ecf620df0b32a437f8a4b6 342 Gene3D G3DSA:2.40.40.20 280 339 2.3E-15 T 11-11-2016 S40542_RS11285 92cca891826e20bf15f6eff16da5bda3 227 Pfam PF03567 Sulfotransferase family 35 184 1.4E-6 T 11-11-2016 IPR005331 Sulfotransferase GO:0008146|GO:0016021 S40542_RS11285 92cca891826e20bf15f6eff16da5bda3 227 SUPERFAMILY SSF52540 27 224 1.02E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05125 9d2c6dc85f5b43c3faa8d84a2e650ece 308 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 14 308 57.658 T 11-11-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 S40542_RS05125 9d2c6dc85f5b43c3faa8d84a2e650ece 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 18 101 3.7E-19 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 S40542_RS05125 9d2c6dc85f5b43c3faa8d84a2e650ece 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 16 308 55.719 T 11-11-2016 IPR023009 Tyrosine recombinase XerC/XerD S40542_RS05125 9d2c6dc85f5b43c3faa8d84a2e650ece 308 Gene3D G3DSA:1.10.150.130 17 110 1.5E-24 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal S40542_RS05125 9d2c6dc85f5b43c3faa8d84a2e650ece 308 Gene3D G3DSA:1.10.443.10 124 298 8.1E-57 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS05125 9d2c6dc85f5b43c3faa8d84a2e650ece 308 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 19 308 1.3E-115 T 11-11-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 S40542_RS05125 9d2c6dc85f5b43c3faa8d84a2e650ece 308 SUPERFAMILY SSF56349 21 298 3.24E-57 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS05125 9d2c6dc85f5b43c3faa8d84a2e650ece 308 Pfam PF00589 Phage integrase family 124 293 1.7E-52 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS07180 1459f9daf32bb4a7339040dff8429731 662 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 165 4.7E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07180 1459f9daf32bb4a7339040dff8429731 662 Gene3D G3DSA:2.170.130.10 38 168 1.2E-27 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07180 1459f9daf32bb4a7339040dff8429731 662 Gene3D G3DSA:2.40.170.20 169 661 5.0E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07180 1459f9daf32bb4a7339040dff8429731 662 Pfam PF00593 TonB dependent receptor 404 660 3.0E-23 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07180 1459f9daf32bb4a7339040dff8429731 662 SUPERFAMILY SSF56935 43 661 4.12E-84 T 11-11-2016 S40542_RS13605 d88d25b8881ae8aa49b7f59cc81cc32d 292 Gene3D G3DSA:1.10.10.10 2 84 1.2E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS13605 d88d25b8881ae8aa49b7f59cc81cc32d 292 SUPERFAMILY SSF53850 89 290 9.31E-37 T 11-11-2016 S40542_RS13605 d88d25b8881ae8aa49b7f59cc81cc32d 292 Gene3D G3DSA:3.40.190.10 166 253 5.2E-6 T 11-11-2016 S40542_RS13605 d88d25b8881ae8aa49b7f59cc81cc32d 292 SUPERFAMILY SSF46785 3 109 5.9E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS13605 d88d25b8881ae8aa49b7f59cc81cc32d 292 Pfam PF03466 LysR substrate binding domain 87 283 4.3E-32 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS13605 d88d25b8881ae8aa49b7f59cc81cc32d 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS13605 d88d25b8881ae8aa49b7f59cc81cc32d 292 Gene3D G3DSA:3.40.190.10 91 165 1.6E-14 T 11-11-2016 S40542_RS12580 6d0d74bbd8ec50180ccca5430b63ded8 231 Gene3D G3DSA:1.10.10.10 158 228 1.6E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS12580 6d0d74bbd8ec50180ccca5430b63ded8 231 Pfam PF00072 Response regulator receiver domain 8 116 7.1E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS12580 6d0d74bbd8ec50180ccca5430b63ded8 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 5.0E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS12580 6d0d74bbd8ec50180ccca5430b63ded8 231 SMART SM00862 151 228 2.2E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS12580 6d0d74bbd8ec50180ccca5430b63ded8 231 SUPERFAMILY SSF46894 149 229 1.81E-16 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS12580 6d0d74bbd8ec50180ccca5430b63ded8 231 SUPERFAMILY SSF52172 5 127 5.55E-36 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS12580 6d0d74bbd8ec50180ccca5430b63ded8 231 SMART SM00448 5 116 2.1E-38 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS12580 6d0d74bbd8ec50180ccca5430b63ded8 231 Gene3D G3DSA:3.40.50.2300 5 157 1.4E-35 T 11-11-2016 S40542_RS12730 94960c369864839ad6039f2065679f74 285 Pfam PF07676 WD40-like Beta Propeller Repeat 183 220 0.056 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12730 94960c369864839ad6039f2065679f74 285 Pfam PF07676 WD40-like Beta Propeller Repeat 235 261 7.6E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12730 94960c369864839ad6039f2065679f74 285 Gene3D G3DSA:2.120.10.30 61 275 1.9E-8 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS12730 94960c369864839ad6039f2065679f74 285 SUPERFAMILY SSF82171 63 264 1.18E-12 T 11-11-2016 S40542_RS16195 592ea1351e2e33e8312aba1c778133e9 200 SUPERFAMILY SSF55729 10 193 3.47E-37 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS16195 592ea1351e2e33e8312aba1c778133e9 200 Gene3D G3DSA:3.40.630.30 9 198 3.5E-45 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS16195 592ea1351e2e33e8312aba1c778133e9 200 Pfam PF13302 Acetyltransferase (GNAT) domain 17 168 6.3E-33 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS19105 9913912c701578af04523076d2270f7c 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.8E-64 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 S40542_RS19105 9913912c701578af04523076d2270f7c 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.8E-64 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 S40542_RS19105 9913912c701578af04523076d2270f7c 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.8E-64 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 S40542_RS19105 9913912c701578af04523076d2270f7c 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.8E-64 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 S40542_RS19105 9913912c701578af04523076d2270f7c 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.8E-64 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 S40542_RS19105 9913912c701578af04523076d2270f7c 347 SUPERFAMILY SSF53067 9 152 3.96E-37 T 11-11-2016 S40542_RS19105 9913912c701578af04523076d2270f7c 347 Gene3D G3DSA:3.30.420.40 164 190 9.2E-34 T 11-11-2016 S40542_RS19105 9913912c701578af04523076d2270f7c 347 Gene3D G3DSA:3.30.420.40 267 321 9.2E-34 T 11-11-2016 S40542_RS19105 9913912c701578af04523076d2270f7c 347 Gene3D G3DSA:3.90.640.10 191 263 1.9E-29 T 11-11-2016 S40542_RS19105 9913912c701578af04523076d2270f7c 347 Gene3D G3DSA:3.30.420.40 10 163 1.1E-45 T 11-11-2016 S40542_RS19105 9913912c701578af04523076d2270f7c 347 Pfam PF06723 MreB/Mbl protein 11 338 4.8E-146 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 S40542_RS19105 9913912c701578af04523076d2270f7c 347 SUPERFAMILY SSF53067 153 340 1.62E-50 T 11-11-2016 S40542_RS19105 9913912c701578af04523076d2270f7c 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 7.7E-163 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 S40542_RS19970 13f30cd81c1fa7cd803dce7a81a07a04 235 Gene3D G3DSA:3.40.190.10 191 228 2.1E-13 T 11-11-2016 S40542_RS19970 13f30cd81c1fa7cd803dce7a81a07a04 235 Gene3D G3DSA:3.40.190.10 5 91 2.1E-13 T 11-11-2016 S40542_RS19970 13f30cd81c1fa7cd803dce7a81a07a04 235 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 7 220 3.3E-21 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS19970 13f30cd81c1fa7cd803dce7a81a07a04 235 SUPERFAMILY SSF53850 7 229 3.36E-29 T 11-11-2016 S40542_RS19970 13f30cd81c1fa7cd803dce7a81a07a04 235 SMART SM00062 5 232 0.0023 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS06645 8de0444533c7186207de94d89e00703e 397 Gene3D G3DSA:1.10.1740.10 312 394 4.3E-28 T 11-11-2016 S40542_RS06645 8de0444533c7186207de94d89e00703e 397 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 132 6.8E-46 T 11-11-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 S40542_RS06645 8de0444533c7186207de94d89e00703e 397 Pfam PF13288 DXP reductoisomerase C-terminal domain 270 386 8.8E-40 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 S40542_RS06645 8de0444533c7186207de94d89e00703e 397 SUPERFAMILY SSF69055 301 393 1.44E-29 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 S40542_RS06645 8de0444533c7186207de94d89e00703e 397 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 6 391 46.378 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 S40542_RS06645 8de0444533c7186207de94d89e00703e 397 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 391 6.4E-162 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 S40542_RS06645 8de0444533c7186207de94d89e00703e 397 Gene3D G3DSA:3.40.50.720 4 150 9.7E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06645 8de0444533c7186207de94d89e00703e 397 PIRSF PIRSF006205 3 397 3.2E-153 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 S40542_RS06645 8de0444533c7186207de94d89e00703e 397 SUPERFAMILY SSF55347 126 273 6.54E-61 T 11-11-2016 S40542_RS06645 8de0444533c7186207de94d89e00703e 397 SUPERFAMILY SSF51735 5 150 8.86E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06645 8de0444533c7186207de94d89e00703e 397 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 238 1.4E-36 T 11-11-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 SUPERFAMILY SSF46894 4 99 1.87E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 Gene3D G3DSA:1.10.10.10 7 101 3.0E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 98 4.1E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 SUPERFAMILY SSF82171 175 250 8.63E-20 T 11-11-2016 S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 SUPERFAMILY SSF82171 376 559 8.63E-20 T 11-11-2016 S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 SMART SM00862 23 98 3.0E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 Gene3D G3DSA:2.120.10.30 176 405 5.6E-17 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 Gene3D G3DSA:2.120.10.30 408 554 4.7E-17 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 Gene3D G3DSA:2.120.10.30 633 682 4.7E-17 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 Pfam PF07676 WD40-like Beta Propeller Repeat 227 248 0.028 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS01880 ee93aa19dd9cee52dcde0b26b413a7d7 717 Pfam PF07676 WD40-like Beta Propeller Repeat 483 509 0.038 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 Pfam PF00672 HAMP domain 267 335 1.2E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 484 3.8E-19 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 Gene3D G3DSA:3.20.20.450 515 765 3.1E-80 T 11-11-2016 IPR001633 EAL domain S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 Pfam PF00990 Diguanylate cyclase, GGDEF domain 345 491 8.9E-25 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 Pfam PF14827 Double sensory domain of two-component sensor kinase 38 208 1.1E-10 T 11-11-2016 IPR029150 Double Cache domain 3 S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 SUPERFAMILY SSF55073 350 491 1.18E-23 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 Pfam PF00563 EAL domain 518 753 3.5E-61 T 11-11-2016 IPR001633 EAL domain S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 Gene3D G3DSA:3.30.70.270 347 503 1.6E-26 T 11-11-2016 S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 SUPERFAMILY SSF141868 525 766 1.7E-76 T 11-11-2016 IPR001633 EAL domain S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 SMART SM00304 286 339 1.1E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 SMART SM00267 334 502 1.7E-21 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 SMART SM00052 511 758 1.9E-81 T 11-11-2016 IPR001633 EAL domain S40542_RS02255 8f450750e689c09a8368944f71232c8e 770 SUPERFAMILY SSF158472 286 335 1.03E-6 T 11-11-2016 S40542_RS19010 6520cf814450cc48727683c79e103daa 183 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 21 173 1.2E-57 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 S40542_RS19010 6520cf814450cc48727683c79e103daa 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 22 137 5.7E-13 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 S40542_RS19010 6520cf814450cc48727683c79e103daa 183 Pfam PF08282 haloacid dehalogenase-like hydrolase 89 152 8.1E-12 T 11-11-2016 IPR023214 HAD-like domain S40542_RS19010 6520cf814450cc48727683c79e103daa 183 PIRSF PIRSF006118 8 181 3.9E-70 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 S40542_RS19010 6520cf814450cc48727683c79e103daa 183 Gene3D G3DSA:3.40.50.1000 13 172 5.6E-44 T 11-11-2016 IPR023214 HAD-like domain S40542_RS19010 6520cf814450cc48727683c79e103daa 183 SUPERFAMILY SSF56784 18 173 4.01E-40 T 11-11-2016 IPR023214 HAD-like domain S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 Pfam PF00271 Helicase conserved C-terminal domain 245 346 1.6E-11 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 SMART SM00487 4 195 5.4E-20 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 SUPERFAMILY SSF57829 429 469 2.01E-5 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 SUPERFAMILY SSF52540 53 172 9.56E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 SUPERFAMILY SSF52540 240 361 9.56E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 Pfam PF04851 Type III restriction enzyme, res subunit 6 158 9.8E-26 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 Gene3D G3DSA:3.40.50.300 240 360 5.7E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 SMART SM00490 269 348 1.3E-9 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS17270 37304cca85844e83ea87bb0fbb1b5645 583 Gene3D G3DSA:3.40.50.300 5 158 2.5E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 Pfam PF05193 Peptidase M16 inactive domain 658 813 7.4E-7 T 11-11-2016 IPR007863 Peptidase M16, C-terminal S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 Pfam PF05193 Peptidase M16 inactive domain 182 348 3.9E-16 T 11-11-2016 IPR007863 Peptidase M16, C-terminal S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 Gene3D G3DSA:3.30.830.10 5 224 4.9E-65 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 11-11-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 Gene3D G3DSA:3.30.830.10 479 700 1.7E-43 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 Gene3D G3DSA:3.30.830.10 704 881 1.8E-30 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 Gene3D G3DSA:3.30.830.10 240 478 2.3E-59 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 Pfam PF16187 Middle or third domain of peptidase_M16 367 650 3.3E-63 T 11-11-2016 IPR032632 Peptidase M16, middle/third domain S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 SUPERFAMILY SSF63411 3 223 3.12E-54 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 SUPERFAMILY SSF63411 232 475 9.53E-64 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 SUPERFAMILY SSF63411 715 880 3.67E-33 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 SUPERFAMILY SSF63411 477 699 1.18E-42 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS05800 3c2cb1e812f0ba9cb88080608f6dfa95 896 Pfam PF00675 Insulinase (Peptidase family M16) 21 156 7.6E-33 T 11-11-2016 IPR011765 Peptidase M16, N-terminal S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 SUPERFAMILY SSF56053 1 81 3.27E-22 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 PRINTS PR00059 Ribosomal protein L6 signature 98 114 6.0E-34 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 PRINTS PR00059 Ribosomal protein L6 signature 140 161 6.0E-34 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 PRINTS PR00059 Ribosomal protein L6 signature 70 95 6.0E-34 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 11-11-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 Gene3D G3DSA:3.90.930.12 82 176 2.8E-42 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 Pfam PF00347 Ribosomal protein L6 89 163 3.1E-21 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 Pfam PF00347 Ribosomal protein L6 11 81 1.9E-17 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 7.4E-75 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 PIRSF PIRSF002162 1 176 3.8E-47 T 11-11-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 SUPERFAMILY SSF56053 82 176 1.15E-37 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 37.86 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 S40542_RS00945 da717b95723e7036ec976cc8f7d8cac7 176 Gene3D G3DSA:3.90.930.12 2 81 2.0E-27 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS12440 f72af08a2649fb7bcbb410b9c82b77d7 303 Gene3D G3DSA:3.30.70.270 150 268 2.6E-18 T 11-11-2016 S40542_RS12440 f72af08a2649fb7bcbb410b9c82b77d7 303 SUPERFAMILY SSF55073 154 266 1.41E-16 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS12440 f72af08a2649fb7bcbb410b9c82b77d7 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 262 6.7E-18 T 11-11-2016 IPR000160 GGDEF domain S40542_RS12440 f72af08a2649fb7bcbb410b9c82b77d7 303 SMART SM00267 137 302 2.4E-7 T 11-11-2016 IPR000160 GGDEF domain S40542_RS12440 f72af08a2649fb7bcbb410b9c82b77d7 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 149 260 1.7E-16 T 11-11-2016 IPR000160 GGDEF domain S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 SMART SM00086 98 140 0.034 T 11-11-2016 IPR001610 PAC motif S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 SMART SM00086 220 262 0.019 T 11-11-2016 IPR001610 PAC motif S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 Pfam PF08447 PAS fold 170 255 1.9E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 Pfam PF13426 PAS domain 38 138 2.7E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 SUPERFAMILY SSF58104 236 432 7.72E-51 T 11-11-2016 S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 SMART SM00283 244 435 3.1E-13 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 SUPERFAMILY SSF55785 36 137 4.71E-22 T 11-11-2016 IPR000014 PAS domain S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 SUPERFAMILY SSF55785 157 259 1.74E-23 T 11-11-2016 IPR000014 PAS domain S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 Gene3D G3DSA:1.10.287.950 257 431 1.0E-44 T 11-11-2016 S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 Gene3D G3DSA:3.30.450.20 36 138 2.2E-20 T 11-11-2016 S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 Gene3D G3DSA:3.30.450.20 158 256 4.9E-21 T 11-11-2016 S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 35 142 2.3E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 159 262 1.7E-15 T 11-11-2016 IPR000014 PAS domain S40542_RS08585 9e5e4805718bc8a2efc10c73d0563698 435 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 284 432 5.0E-39 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS13845 bfead73e755bf5e0e3edc2fd69f4a1e7 379 SUPERFAMILY SSF52096 26 202 1.66E-56 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13845 bfead73e755bf5e0e3edc2fd69f4a1e7 379 SUPERFAMILY SSF52096 278 351 1.66E-56 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13845 bfead73e755bf5e0e3edc2fd69f4a1e7 379 Gene3D G3DSA:3.90.226.10 20 205 3.4E-50 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13845 bfead73e755bf5e0e3edc2fd69f4a1e7 379 Pfam PF16113 Enoyl-CoA hydratase/isomerase 28 365 1.5E-114 T 11-11-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 S40542_RS05995 ae8023a8b825968ad2cc55aa02674bfd 311 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 34 181 2.5E-53 T 11-11-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 S40542_RS05995 ae8023a8b825968ad2cc55aa02674bfd 311 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 253 305 4.2E-10 T 11-11-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS05995 ae8023a8b825968ad2cc55aa02674bfd 311 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 220 1.1E-75 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS05995 ae8023a8b825968ad2cc55aa02674bfd 311 SUPERFAMILY SSF88697 252 307 5.47E-5 T 11-11-2016 IPR015947 PUA-like domain S40542_RS05995 ae8023a8b825968ad2cc55aa02674bfd 311 Gene3D G3DSA:2.30.130.10 251 307 2.2E-10 T 11-11-2016 IPR015947 PUA-like domain S40542_RS05995 ae8023a8b825968ad2cc55aa02674bfd 311 SUPERFAMILY SSF55120 9 250 2.45E-75 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS05995 ae8023a8b825968ad2cc55aa02674bfd 311 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 249 3.3E-21 T 11-11-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 S40542_RS05995 ae8023a8b825968ad2cc55aa02674bfd 311 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 307 17.414 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 4.0E-28 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.4E-41 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 SUPERFAMILY SSF46604 88 138 2.88E-9 T 11-11-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 132 7.1E-9 T 11-11-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 Gene3D G3DSA:2.60.15.10 3 91 4.0E-29 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 Gene3D G3DSA:1.20.5.440 92 134 2.7E-11 T 11-11-2016 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 1.0E-30 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 132 20.883 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20690 88daaff307be900ddb26a3424ad96614 138 SUPERFAMILY SSF51344 3 86 3.27E-24 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 Pfam PF13522 Glutamine amidotransferase domain 64 208 1.9E-16 T 11-11-2016 S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 PIRSF PIRSF000485 1 481 9.5E-163 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.252 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 Pfam PF00156 Phosphoribosyl transferase domain 282 393 1.4E-6 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 1.3E-158 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 SUPERFAMILY SSF56235 2 257 1.72E-70 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 SUPERFAMILY SSF53271 250 483 3.63E-68 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 Gene3D G3DSA:3.40.50.2020 273 443 8.8E-43 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS17035 f4386e5fdacce154d45170f13cf03db9 508 Gene3D G3DSA:3.60.20.10 2 258 1.4E-61 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS08370 08622b6adf35e22f50fdf3ce98163fdc 88 Pfam PF01527 Transposase 2 71 7.3E-23 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 S40542_RS08370 08622b6adf35e22f50fdf3ce98163fdc 88 SUPERFAMILY SSF46689 1 73 1.13E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08370 08622b6adf35e22f50fdf3ce98163fdc 88 Gene3D G3DSA:1.10.10.60 14 83 1.2E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07675 08622b6adf35e22f50fdf3ce98163fdc 88 Pfam PF01527 Transposase 2 71 7.3E-23 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 S40542_RS07675 08622b6adf35e22f50fdf3ce98163fdc 88 SUPERFAMILY SSF46689 1 73 1.13E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07675 08622b6adf35e22f50fdf3ce98163fdc 88 Gene3D G3DSA:1.10.10.60 14 83 1.2E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS13085 08622b6adf35e22f50fdf3ce98163fdc 88 Pfam PF01527 Transposase 2 71 7.3E-23 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 S40542_RS13085 08622b6adf35e22f50fdf3ce98163fdc 88 SUPERFAMILY SSF46689 1 73 1.13E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS13085 08622b6adf35e22f50fdf3ce98163fdc 88 Gene3D G3DSA:1.10.10.60 14 83 1.2E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06485 ee1f980b76b94956d5b86df9dccc98be 261 SMART SM00260 114 249 1.2E-5 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS06485 ee1f980b76b94956d5b86df9dccc98be 261 SUPERFAMILY SSF50341 116 250 1.31E-16 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS06485 ee1f980b76b94956d5b86df9dccc98be 261 PIRSF PIRSF020479 7 261 3.0E-76 T 11-11-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like S40542_RS06485 ee1f980b76b94956d5b86df9dccc98be 261 Pfam PF01584 CheW-like domain 118 248 9.3E-14 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS25180 2dc828d3d41f85faa050189fc2d065ef 119 SUPERFAMILY SSF81345 5 119 3.53E-28 T 11-11-2016 IPR029022 ABC transporter, BtuC-like S40542_RS25180 2dc828d3d41f85faa050189fc2d065ef 119 Gene3D G3DSA:1.10.3470.10 3 119 9.9E-38 T 11-11-2016 IPR029022 ABC transporter, BtuC-like S40542_RS25180 2dc828d3d41f85faa050189fc2d065ef 119 Pfam PF01032 FecCD transport family 3 119 1.6E-34 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 S40542_RS00490 7a6f5b153c401d29efd8e91b14cd5886 248 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 226 6.9E-71 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 S40542_RS00490 7a6f5b153c401d29efd8e91b14cd5886 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.5E-45 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 S40542_RS00490 7a6f5b153c401d29efd8e91b14cd5886 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.5E-45 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 S40542_RS00490 7a6f5b153c401d29efd8e91b14cd5886 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.5E-45 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 S40542_RS00490 7a6f5b153c401d29efd8e91b14cd5886 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.5E-45 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 S40542_RS00490 7a6f5b153c401d29efd8e91b14cd5886 248 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 5.0E-63 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 S40542_RS00490 7a6f5b153c401d29efd8e91b14cd5886 248 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 241 18.05 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 S40542_RS00490 7a6f5b153c401d29efd8e91b14cd5886 248 ProSitePatterns PS01218 TatC family signature. 154 173 - T 11-11-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site S40542_RS19905 e18229450ef7b65caef7d25670d5fab3 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site S40542_RS19905 e18229450ef7b65caef7d25670d5fab3 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 2.4E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS19905 e18229450ef7b65caef7d25670d5fab3 203 SUPERFAMILY SSF46689 3 78 2.32E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19905 e18229450ef7b65caef7d25670d5fab3 203 Gene3D G3DSA:1.10.357.10 3 185 1.7E-36 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 719 832 9.3E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SMART SM01079 51 224 2.2E-40 T 11-11-2016 IPR006189 CHASE domain S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SUPERFAMILY SSF52172 975 1098 3.42E-35 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Gene3D G3DSA:3.30.450.40 432 592 2.9E-11 T 11-11-2016 IPR029016 GAF domain-like S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Pfam PF00072 Response regulator receiver domain 977 1093 1.1E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SUPERFAMILY SSF55781 424 601 1.26E-12 T 11-11-2016 IPR029016 GAF domain-like S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SMART SM00065 439 591 5.2E-4 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Gene3D G3DSA:3.30.565.10 658 834 1.9E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Pfam PF00512 His Kinase A (phospho-acceptor) domain 608 671 4.4E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SMART SM00387 718 833 6.2E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Gene3D G3DSA:3.40.50.2300 975 1101 1.4E-39 T 11-11-2016 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SUPERFAMILY SSF55785 304 409 3.89E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SUPERFAMILY SSF47384 598 673 9.02E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SMART SM00448 975 1093 1.5E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SUPERFAMILY SSF55874 660 830 1.23E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Gene3D G3DSA:1.10.287.130 600 657 6.9E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 SMART SM00388 606 671 1.7E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Gene3D G3DSA:3.30.450.20 287 406 2.0E-6 T 11-11-2016 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Pfam PF01590 GAF domain 447 578 2.0E-5 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 830 1.0E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 793 811 1.0E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 758 772 1.0E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 776 786 1.0E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20210 248329138966e35bc03300fb43bdc6b5 1109 Pfam PF03924 CHASE domain 114 209 7.0E-17 T 11-11-2016 IPR006189 CHASE domain S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 Gene3D G3DSA:3.40.50.1170 2 197 2.4E-74 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 Pfam PF00710 Asparaginase, N-terminal 5 190 2.5E-64 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 11-11-2016 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 Gene3D G3DSA:3.40.50.40 210 335 1.7E-48 T 11-11-2016 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 11-11-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 3.8E-17 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 3.8E-17 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 3.8E-17 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 SMART SM00870 5 323 1.6E-129 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 335 8.9E-114 T 11-11-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 SUPERFAMILY SSF53774 3 335 5.63E-109 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 PIRSF PIRSF001220 1 334 4.5E-93 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 S40542_RS10890 e09479ff630652e8943c776c326ca4f0 336 PIRSF PIRSF500176 2 332 2.4E-106 T 11-11-2016 S40542_RS15835 5da4c00e869fbf54ee6497308c58d384 247 Pfam PF10615 Protein of unknown function (DUF2470) 161 231 3.4E-10 T 11-11-2016 IPR019595 Domain of unknown function DUF2470 S40542_RS15835 5da4c00e869fbf54ee6497308c58d384 247 Gene3D G3DSA:2.30.110.10 2 150 6.0E-49 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS15835 5da4c00e869fbf54ee6497308c58d384 247 SUPERFAMILY SSF50475 5 237 3.46E-51 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS15835 5da4c00e869fbf54ee6497308c58d384 247 Gene3D G3DSA:3.20.180.10 155 242 8.9E-25 T 11-11-2016 IPR019595 Domain of unknown function DUF2470 S40542_RS15835 5da4c00e869fbf54ee6497308c58d384 247 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 2 151 2.6E-24 T 11-11-2016 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 Gene3D G3DSA:1.10.287.950 375 590 1.4E-53 T 11-11-2016 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 SUPERFAMILY SSF103190 93 183 1.8E-16 T 11-11-2016 IPR029151 Periplasmic sensor domain-like S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 SMART SM00304 291 345 2.5E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 Pfam PF00672 HAMP domain 273 341 7.6E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 SUPERFAMILY SSF58104 313 622 2.75E-71 T 11-11-2016 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 9.1E-9 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 487 516 9.1E-9 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 SMART SM00283 360 621 1.8E-68 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 Gene3D G3DSA:3.30.450.20 138 268 2.4E-26 T 11-11-2016 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 620 3.1E-46 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS11065 cf998531aaff751e23a9823eda3beb53 622 Pfam PF02743 Cache domain 33 253 5.6E-29 T 11-11-2016 IPR033479 Double Cache domain 1 S40542_RS17110 484033bdfc09ed6b532a2fc0f2b88be4 683 SUPERFAMILY SSF82171 198 428 2.08E-8 T 11-11-2016 S40542_RS17110 484033bdfc09ed6b532a2fc0f2b88be4 683 Gene3D G3DSA:1.10.10.10 10 106 1.9E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17110 484033bdfc09ed6b532a2fc0f2b88be4 683 SUPERFAMILY SSF46894 22 105 7.09E-15 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS17110 484033bdfc09ed6b532a2fc0f2b88be4 683 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 104 3.7E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS17110 484033bdfc09ed6b532a2fc0f2b88be4 683 Gene3D G3DSA:2.120.10.60 421 509 6.7E-4 T 11-11-2016 S40542_RS17110 484033bdfc09ed6b532a2fc0f2b88be4 683 SUPERFAMILY SSF82171 415 660 9.81E-6 T 11-11-2016 S40542_RS17110 484033bdfc09ed6b532a2fc0f2b88be4 683 SMART SM00862 28 104 1.2E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS17110 484033bdfc09ed6b532a2fc0f2b88be4 683 Gene3D G3DSA:2.120.10.30 192 381 3.3E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 Gene3D G3DSA:2.60.120.280 18 139 2.4E-7 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 SMART SM00342 173 256 1.8E-26 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 Gene3D G3DSA:1.10.10.60 210 259 1.5E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.6E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.6E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 SUPERFAMILY SSF46689 156 207 9.41E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 SUPERFAMILY SSF51215 19 137 2.48E-9 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 SUPERFAMILY SSF46689 210 258 2.28E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 Gene3D G3DSA:1.10.10.60 153 209 1.6E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS15140 77ef834d7ee25f16243e096ed7a505c8 261 Pfam PF12833 Helix-turn-helix domain 180 257 4.0E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS05965 0e7dbe78e940d0d2d7d6c86b5d0f4d2d 261 Pfam PF10563 Cadmium carbonic anhydrase repeat 147 226 2.8E-5 T 11-11-2016 IPR018883 Carbonic anhydrase, cadmium-binding S40542_RS18590 153c5be498322ef7d5e9eef573f6799c 374 Gene3D G3DSA:3.10.560.10 166 244 2.8E-25 T 11-11-2016 S40542_RS18590 153c5be498322ef7d5e9eef573f6799c 374 Gene3D G3DSA:3.10.560.10 245 344 2.3E-28 T 11-11-2016 S40542_RS18590 153c5be498322ef7d5e9eef573f6799c 374 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 166 1.2E-21 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 S40542_RS18590 153c5be498322ef7d5e9eef573f6799c 374 Pfam PF10531 SLBB domain 258 313 6.8E-6 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS18590 153c5be498322ef7d5e9eef573f6799c 374 Pfam PF10531 SLBB domain 174 218 6.2E-11 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS18590 153c5be498322ef7d5e9eef573f6799c 374 Gene3D G3DSA:3.30.1950.10 91 165 3.0E-23 T 11-11-2016 S40542_RS18590 153c5be498322ef7d5e9eef573f6799c 374 Gene3D G3DSA:1.20.5.70 346 368 6.1E-7 T 11-11-2016 S40542_RS10450 4e2ae9ff6563cecac5121edf45939d3b 104 Gene3D G3DSA:1.10.260.40 11 73 2.1E-4 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS02765 f88bafcafd0490ddc4a6d543945ae911 515 Gene3D G3DSA:1.25.40.10 119 269 1.6E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02765 f88bafcafd0490ddc4a6d543945ae911 515 Gene3D G3DSA:1.25.40.10 309 381 5.2E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02765 f88bafcafd0490ddc4a6d543945ae911 515 Gene3D G3DSA:1.25.40.10 416 463 5.2E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02765 f88bafcafd0490ddc4a6d543945ae911 515 SMART SM00028 335 368 22.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS02765 f88bafcafd0490ddc4a6d543945ae911 515 SMART SM00028 175 208 1.4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS02765 f88bafcafd0490ddc4a6d543945ae911 515 SUPERFAMILY SSF81901 119 314 5.67E-15 T 11-11-2016 S40542_RS14490 c9218bb0d5f6eeadab7de00c7a0fcebb 70 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 70 20.68 T 11-11-2016 IPR009857 Uncharacterised protein family UPF0352 S40542_RS14490 c9218bb0d5f6eeadab7de00c7a0fcebb 70 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.7E-23 T 11-11-2016 IPR009857 Uncharacterised protein family UPF0352 S40542_RS14490 c9218bb0d5f6eeadab7de00c7a0fcebb 70 Gene3D G3DSA:1.10.3390.10 1 70 7.4E-34 T 11-11-2016 IPR023202 YejL-like domain S40542_RS14490 c9218bb0d5f6eeadab7de00c7a0fcebb 70 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 5.0E-28 T 11-11-2016 IPR009857 Uncharacterised protein family UPF0352 S40542_RS14490 c9218bb0d5f6eeadab7de00c7a0fcebb 70 PIRSF PIRSF006188 1 70 1.9E-30 T 11-11-2016 IPR009857 Uncharacterised protein family UPF0352 S40542_RS14490 c9218bb0d5f6eeadab7de00c7a0fcebb 70 SUPERFAMILY SSF158651 1 70 1.83E-28 T 11-11-2016 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 Pfam PF00162 Phosphoglycerate kinase 6 378 1.1E-141 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PIRSF PIRSF000724 1 392 2.1E-136 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-11-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.4E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 38.91 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 Gene3D G3DSA:3.40.50.1270 175 376 1.1E-82 T 11-11-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 Gene3D G3DSA:3.40.50.1260 5 174 1.1E-63 T 11-11-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03580 4deb8200f2158675b41ee112fbe9181d 392 SUPERFAMILY SSF53748 3 388 1.0E-146 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS05210 bb74dadf5c32781c5faa7a8835f8ec70 185 SUPERFAMILY SSF88946 21 115 1.65E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS05210 bb74dadf5c32781c5faa7a8835f8ec70 185 SUPERFAMILY SSF88659 125 182 3.05E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS05210 bb74dadf5c32781c5faa7a8835f8ec70 185 Gene3D G3DSA:1.10.1740.10 25 119 6.2E-16 T 11-11-2016 S40542_RS05210 bb74dadf5c32781c5faa7a8835f8ec70 185 Pfam PF08281 Sigma-70, region 4 126 177 2.8E-9 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS05210 bb74dadf5c32781c5faa7a8835f8ec70 185 Pfam PF04542 Sigma-70 region 2 50 101 8.2E-13 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS05210 bb74dadf5c32781c5faa7a8835f8ec70 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 181 4.4E-21 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS05210 bb74dadf5c32781c5faa7a8835f8ec70 185 Gene3D G3DSA:1.10.10.10 126 183 2.8E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 SUPERFAMILY SSF51338 503 544 8.35E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 SUPERFAMILY SSF51338 21 78 8.35E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 Gene3D G3DSA:3.20.20.140 488 542 7.1E-6 T 11-11-2016 S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 Gene3D G3DSA:2.30.40.10 19 88 1.4E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 SUPERFAMILY SSF51556 209 504 5.24E-36 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 SUPERFAMILY SSF51556 77 133 5.24E-36 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 Gene3D G3DSA:3.20.20.140 89 100 3.5E-30 T 11-11-2016 S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 Gene3D G3DSA:3.20.20.140 215 487 3.5E-30 T 11-11-2016 S40542_RS18435 af3ad449cc79772b08fc50dd508bc4bf 547 Pfam PF07969 Amidohydrolase family 67 542 2.2E-101 T 11-11-2016 IPR013108 Amidohydrolase 3 S40542_RS22930 b28deeb68ad7adc0b8dbba01fd231b79 298 Pfam PF02601 Exonuclease VII, large subunit 120 297 2.1E-75 T 11-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 S40542_RS22930 b28deeb68ad7adc0b8dbba01fd231b79 298 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 1 298 21.322 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS22930 b28deeb68ad7adc0b8dbba01fd231b79 298 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 5 297 1.2E-124 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS22930 b28deeb68ad7adc0b8dbba01fd231b79 298 Pfam PF13742 OB-fold nucleic acid binding domain 4 96 7.6E-30 T 11-11-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 PIRSF PIRSF037167 5 311 3.1E-138 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 211 217 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 11 307 51.998 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 Gene3D G3DSA:3.40.50.150 113 293 7.7E-52 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 SUPERFAMILY SSF53335 22 300 7.72E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 18 301 3.9E-132 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 307 9.6E-83 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 Gene3D G3DSA:1.10.8.10 20 111 2.4E-7 T 11-11-2016 S40542_RS15705 13eac2dc424f9a17940bb3150141da06 311 Pfam PF05175 Methyltransferase small domain 140 222 1.1E-15 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 S40542_RS08645 0a17b146ef28e1b4aedf5235cad89b4a 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 134 2.5E-30 T 11-11-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain S40542_RS08645 0a17b146ef28e1b4aedf5235cad89b4a 144 Gene3D G3DSA:3.30.530.20 1 142 9.8E-46 T 11-11-2016 IPR023393 START-like domain S40542_RS08645 0a17b146ef28e1b4aedf5235cad89b4a 144 SUPERFAMILY SSF55961 1 142 2.03E-31 T 11-11-2016 S40542_RS05865 5018e2d03a847212c0b4e0bc8519187f 437 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 14 436 5.9E-165 T 11-11-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 S40542_RS05865 5018e2d03a847212c0b4e0bc8519187f 437 Gene3D G3DSA:3.90.850.10 133 427 1.4E-103 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 S40542_RS05865 5018e2d03a847212c0b4e0bc8519187f 437 Pfam PF09298 Fumarylacetoacetase N-terminal 29 130 9.8E-24 T 11-11-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 S40542_RS05865 5018e2d03a847212c0b4e0bc8519187f 437 Gene3D G3DSA:2.30.30.230 14 132 4.3E-34 T 11-11-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 S40542_RS05865 5018e2d03a847212c0b4e0bc8519187f 437 SUPERFAMILY SSF63433 13 130 1.44E-31 T 11-11-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 S40542_RS05865 5018e2d03a847212c0b4e0bc8519187f 437 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 136 433 1.1E-52 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 S40542_RS05865 5018e2d03a847212c0b4e0bc8519187f 437 SUPERFAMILY SSF56529 132 436 6.28E-93 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 Gene3D G3DSA:1.10.630.10 21 442 4.3E-98 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00465 E-class P450 group IV signature 335 349 7.2E-17 T 11-11-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00465 E-class P450 group IV signature 373 389 7.2E-17 T 11-11-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00465 E-class P450 group IV signature 301 317 7.2E-17 T 11-11-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00465 E-class P450 group IV signature 389 407 7.2E-17 T 11-11-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00465 E-class P450 group IV signature 25 48 7.2E-17 T 11-11-2016 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 Pfam PF00067 Cytochrome P450 21 417 2.9E-72 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 382 391 - T 11-11-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 SUPERFAMILY SSF48264 20 440 1.83E-85 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00385 P450 superfamily signature 380 389 1.3E-12 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00385 P450 superfamily signature 389 400 1.3E-12 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00385 P450 superfamily signature 257 274 1.3E-12 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS13315 23c44de1579de59e27ddb9b278483d92 446 PRINTS PR00385 P450 superfamily signature 306 317 1.3E-12 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS02095 eb62f07bd97a909f284754c29f25f636 128 Gene3D G3DSA:3.30.1300.30 35 124 2.9E-27 T 11-11-2016 S40542_RS02095 eb62f07bd97a909f284754c29f25f636 128 SUPERFAMILY SSF54523 40 124 2.32E-22 T 11-11-2016 S40542_RS02095 eb62f07bd97a909f284754c29f25f636 128 Pfam PF02501 Type II secretion system (T2SS), protein I 42 123 1.1E-23 T 11-11-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 S40542_RS02095 eb62f07bd97a909f284754c29f25f636 128 TIGRFAM TIGR01707 gspI: type II secretion system protein I 8 108 1.1E-24 T 11-11-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 S40542_RS02095 eb62f07bd97a909f284754c29f25f636 128 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 27 2.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS02095 eb62f07bd97a909f284754c29f25f636 128 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 4.0E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 Gene3D G3DSA:3.40.50.1370 139 288 9.8E-52 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 Gene3D G3DSA:3.40.50.1370 2 138 1.2E-46 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 SUPERFAMILY SSF53671 2 302 1.44E-87 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 1.6E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 1.6E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 1.6E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 1.6E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 141 5.3E-41 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 301 8.4E-99 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 299 5.1E-47 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 3.8E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 117 131 3.8E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 77 90 3.8E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 3.8E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18360 e8dbd50c657c3d82d143d1e42a972e68 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 44 58 3.8E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS13725 2bb3dcbd619b9e0376480901e0418ba8 432 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 5 420 2.5E-160 T 11-11-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 S40542_RS13725 2bb3dcbd619b9e0376480901e0418ba8 432 SUPERFAMILY SSF51679 2 426 1.44E-129 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 S40542_RS13725 2bb3dcbd619b9e0376480901e0418ba8 432 PIRSF PIRSF000337 1 432 2.3E-150 T 11-11-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 S40542_RS13725 2bb3dcbd619b9e0376480901e0418ba8 432 Pfam PF00296 Luciferase-like monooxygenase 16 374 2.6E-64 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 S40542_RS13725 2bb3dcbd619b9e0376480901e0418ba8 432 Gene3D G3DSA:3.20.20.30 2 297 1.1E-135 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 S40542_RS13725 2bb3dcbd619b9e0376480901e0418ba8 432 Gene3D G3DSA:3.20.20.30 338 426 1.1E-135 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 Gene3D G3DSA:3.40.190.10 102 180 7.1E-12 T 11-11-2016 S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 Gene3D G3DSA:3.40.190.10 181 259 2.4E-14 T 11-11-2016 S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 Pfam PF03466 LysR substrate binding domain 92 292 6.8E-33 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.4E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 Gene3D G3DSA:1.10.10.10 1 85 6.9E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 SUPERFAMILY SSF46785 2 82 5.83E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 SUPERFAMILY SSF53850 90 294 5.91E-34 T 11-11-2016 S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17295 5e0fbdd9f63a2f32ee4c44a0f4eeb7bf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 45.511 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 2.4E-154 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 SUPERFAMILY SSF52540 197 369 9.71E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 SUPERFAMILY SSF54980 369 419 6.33E-11 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.8E-21 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 4.2E-31 T 11-11-2016 IPR025121 GTPase HflX, N-terminal S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.7E-9 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.7E-9 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.7E-9 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 PIRSF PIRSF006809 3 421 1.7E-145 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 Gene3D G3DSA:3.40.50.300 197 362 2.9E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04100 c6320af3f48da7074d1fdec6ef5972d5 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 3.1E-28 T 11-11-2016 IPR032305 GTP-binding protein, middle domain S40542_RS02735 ddcd5bf52d7b2fcec7dc7ee642c7dddf 685 SUPERFAMILY SSF63825 468 682 1.31E-22 T 11-11-2016 S40542_RS02735 ddcd5bf52d7b2fcec7dc7ee642c7dddf 685 Pfam PF01436 NHL repeat 506 532 4.4E-7 T 11-11-2016 IPR001258 NHL repeat GO:0005515 S40542_RS02735 ddcd5bf52d7b2fcec7dc7ee642c7dddf 685 SUPERFAMILY SSF63825 28 266 6.8E-25 T 11-11-2016 S40542_RS02735 ddcd5bf52d7b2fcec7dc7ee642c7dddf 685 Gene3D G3DSA:2.120.10.30 476 683 3.3E-36 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS02735 ddcd5bf52d7b2fcec7dc7ee642c7dddf 685 Gene3D G3DSA:2.120.10.30 24 290 1.1E-32 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 SUPERFAMILY SSF52172 122 266 1.99E-30 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 Pfam PF00072 Response regulator receiver domain 4 107 6.1E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 Pfam PF00072 Response regulator receiver domain 126 235 1.2E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 Gene3D G3DSA:3.40.50.2300 120 244 1.8E-29 T 11-11-2016 S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 SUPERFAMILY SSF55073 259 407 4.55E-39 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 SUPERFAMILY SSF52172 1 110 2.28E-16 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 SMART SM00448 2 111 3.5E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 SMART SM00448 123 237 1.9E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 407 1.9E-38 T 11-11-2016 IPR000160 GGDEF domain S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 Gene3D G3DSA:3.40.50.2300 2 110 4.7E-16 T 11-11-2016 S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 SMART SM00267 243 409 2.7E-41 T 11-11-2016 IPR000160 GGDEF domain S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 Gene3D G3DSA:3.30.70.270 256 410 2.4E-46 T 11-11-2016 S40542_RS04895 a7f8280d6e459a7f9304202769e526d2 422 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 404 5.8E-37 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02250 4961948def796ab5959b51705eaa6963 366 Gene3D G3DSA:3.30.200.20 13 134 2.1E-30 T 11-11-2016 S40542_RS02250 4961948def796ab5959b51705eaa6963 366 Pfam PF01259 SAICAR synthetase 21 294 2.7E-47 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS02250 4961948def796ab5959b51705eaa6963 366 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 4 365 3.3E-185 T 11-11-2016 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 S40542_RS02250 4961948def796ab5959b51705eaa6963 366 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 18 341 21.14 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS02250 4961948def796ab5959b51705eaa6963 366 SUPERFAMILY SSF56104 14 343 2.94E-64 T 11-11-2016 S40542_RS02250 4961948def796ab5959b51705eaa6963 366 Gene3D G3DSA:3.30.470.20 135 281 3.0E-38 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 556 42.823 T 11-11-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 Pfam PF00270 DEAD/DEAH box helicase 30 195 4.0E-51 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 SMART SM00487 24 222 5.0E-60 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 Pfam PF00271 Helicase conserved C-terminal domain 230 338 7.8E-29 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 SUPERFAMILY SSF52540 73 359 2.59E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 Pfam PF03880 DbpA RNA binding domain 484 554 2.1E-20 T 11-11-2016 IPR005580 DbpA, RNA-binding domain S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 Gene3D G3DSA:3.40.50.300 5 212 2.2E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 SMART SM00490 257 338 6.1E-32 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS16025 9ac3986b239ad6174294058f3c53119d 632 Gene3D G3DSA:3.40.50.300 213 373 5.7E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12090 fc5af8e6a387e4efd1b889bc077026d8 269 SUPERFAMILY SSF56219 1 268 1.31E-82 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS12090 fc5af8e6a387e4efd1b889bc077026d8 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 9.2E-25 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS12090 fc5af8e6a387e4efd1b889bc077026d8 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 8.9E-95 T 11-11-2016 S40542_RS12090 fc5af8e6a387e4efd1b889bc077026d8 269 Gene3D G3DSA:3.60.10.10 1 268 6.8E-82 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS12090 fc5af8e6a387e4efd1b889bc077026d8 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 268 1.4E-84 T 11-11-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 S40542_RS12090 fc5af8e6a387e4efd1b889bc077026d8 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-11-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 S40542_RS11540 78a8e8c8751537f0dfe8853f369350ad 723 Pfam PF13567 Domain of unknown function (DUF4131) 5 149 7.8E-7 T 11-11-2016 IPR025405 Domain of unknown function DUF4131 S40542_RS11540 78a8e8c8751537f0dfe8853f369350ad 723 SUPERFAMILY SSF56281 477 712 6.09E-33 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS11540 78a8e8c8751537f0dfe8853f369350ad 723 Pfam PF03772 Competence protein 184 453 6.8E-48 T 11-11-2016 IPR004477 ComEC/Rec2-related protein S40542_RS11540 78a8e8c8751537f0dfe8853f369350ad 723 Gene3D G3DSA:3.60.15.10 477 685 4.2E-17 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS11540 78a8e8c8751537f0dfe8853f369350ad 723 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 206 392 3.9E-23 T 11-11-2016 IPR004477 ComEC/Rec2-related protein S40542_RS11540 78a8e8c8751537f0dfe8853f369350ad 723 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 106 697 3.9E-90 T 11-11-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 SUPERFAMILY SSF48179 178 447 7.48E-81 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 SMART SM01350 179 443 2.3E-96 T 11-11-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 443 3.0E-77 T 11-11-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 Gene3D G3DSA:3.40.50.720 1 180 1.5E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 Gene3D G3DSA:1.10.1040.10 181 415 3.6E-69 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 SUPERFAMILY SSF51735 1 170 3.6E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 6.1E-53 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 120 145 6.1E-53 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 6.1E-53 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 353 375 6.1E-53 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 67 96 6.1E-53 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 6.1E-53 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 163 3.7E-34 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 PIRSF PIRSF000109 1 451 4.7E-117 T 11-11-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS10895 c63f63fea876e476090d77aba8c6337e 457 Gene3D G3DSA:1.20.5.320 422 435 2.0E-5 T 11-11-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 S40542_RS15900 9c862ec5a7bf8dd0c161cc02fa281ea1 167 SUPERFAMILY SSF54523 4 143 1.57E-10 T 11-11-2016 S40542_RS15900 9c862ec5a7bf8dd0c161cc02fa281ea1 167 Pfam PF12019 Type II transport protein GspH 43 156 7.6E-10 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 SUPERFAMILY SSF53633 4 241 1.27E-70 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 PIRSF PIRSF000726 59 406 4.5E-124 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 Pfam PF13840 ACT domain 337 398 4.7E-12 T 11-11-2016 IPR027795 GATS-like ACT domain S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 SUPERFAMILY SSF55021 326 403 5.09E-20 T 11-11-2016 S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 Gene3D G3DSA:3.40.1160.10 3 244 3.3E-72 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 SUPERFAMILY SSF55021 251 323 3.88E-11 T 11-11-2016 S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 400 8.7E-107 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 402 3.3E-127 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS05260 5c5310fe01ab46c15b793f2607aff79d 406 Pfam PF00696 Amino acid kinase family 3 229 1.6E-47 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS09085 3645745eace6a7da47361bb1ac7a34b4 844 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 11-11-2016 IPR010916 TonB box, conserved site S40542_RS09085 3645745eace6a7da47361bb1ac7a34b4 844 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 168 1.1E-19 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS09085 3645745eace6a7da47361bb1ac7a34b4 844 Gene3D G3DSA:2.40.170.20 170 844 3.7E-80 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS09085 3645745eace6a7da47361bb1ac7a34b4 844 SUPERFAMILY SSF56935 33 844 8.24E-95 T 11-11-2016 S40542_RS09085 3645745eace6a7da47361bb1ac7a34b4 844 Gene3D G3DSA:2.170.130.10 47 169 6.7E-27 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS09085 3645745eace6a7da47361bb1ac7a34b4 844 Pfam PF00593 TonB dependent receptor 514 842 3.1E-24 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS09210 fac6efccaa124e6eb3009cd975e4bd56 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 10 465 8.4E-229 T 11-11-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 S40542_RS09210 fac6efccaa124e6eb3009cd975e4bd56 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS09210 fac6efccaa124e6eb3009cd975e4bd56 477 SUPERFAMILY SSF81442 10 465 1.05E-124 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS09210 fac6efccaa124e6eb3009cd975e4bd56 477 Gene3D G3DSA:1.20.210.10 10 465 2.8E-72 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS09210 fac6efccaa124e6eb3009cd975e4bd56 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 14 444 4.4E-116 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Pfam PF08329 Chitinase A, N-terminal domain 30 156 1.9E-32 T 11-11-2016 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Gene3D G3DSA:3.10.50.10 466 542 4.1E-21 T 11-11-2016 IPR029070 Chitinase insertion domain S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Pfam PF02839 Carbohydrate binding domain 786 826 4.7E-5 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SUPERFAMILY SSF81296 31 138 2.52E-17 T 11-11-2016 IPR014756 Immunoglobulin E-set S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SUPERFAMILY SSF54556 464 540 3.53E-15 T 11-11-2016 IPR029070 Chitinase insertion domain S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SMART SM00495 840 885 0.077 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SMART SM00495 785 834 5.5E-4 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SUPERFAMILY SSF51445 540 573 1.26E-82 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SUPERFAMILY SSF51445 168 464 1.26E-82 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Pfam PF00704 Glycosyl hydrolases family 18 176 568 1.1E-73 T 11-11-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SUPERFAMILY SSF51055 773 836 1.45E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SUPERFAMILY SSF51055 840 884 7.06E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Gene3D G3DSA:2.60.40.10 31 138 3.0E-22 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Gene3D G3DSA:3.20.20.80 545 583 4.5E-100 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Gene3D G3DSA:3.20.20.80 167 465 4.5E-100 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Gene3D G3DSA:2.10.10.20 783 837 7.1E-10 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 Gene3D G3DSA:2.10.10.20 841 884 1.1E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS05585 e326f7079d096cc88e1d502e950f4132 885 SMART SM00636 174 568 1.0E-113 T 11-11-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-11-2016 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 SUPERFAMILY SSF54814 2 106 9.68E-38 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 SUPERFAMILY SSF54821 108 206 1.31E-40 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 Gene3D G3DSA:3.30.1140.32 108 207 9.9E-48 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 Gene3D G3DSA:3.30.300.20 18 107 1.0E-33 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 Pfam PF07650 KH domain 38 111 1.7E-20 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.0E-99 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.6E-41 T 11-11-2016 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.428 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 S40542_RS01205 e3fd57958f8cf098589f267fb6d38f98 233 SMART SM00322 60 125 7.5E-8 T 11-11-2016 IPR004087 K Homology domain GO:0003676 S40542_RS08040 945312d08e792164d0d51e920f5ac24e 347 Gene3D G3DSA:3.40.47.10 2 204 3.2E-51 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08040 945312d08e792164d0d51e920f5ac24e 347 SUPERFAMILY SSF53901 206 344 2.15E-30 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08040 945312d08e792164d0d51e920f5ac24e 347 PIRSF PIRSF000451 1 347 6.9E-101 T 11-11-2016 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 S40542_RS08040 945312d08e792164d0d51e920f5ac24e 347 SUPERFAMILY SSF53901 2 204 1.54E-45 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08040 945312d08e792164d0d51e920f5ac24e 347 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 62 199 2.7E-18 T 11-11-2016 IPR001099 Chalcone/stilbene synthase, N-terminal S40542_RS08040 945312d08e792164d0d51e920f5ac24e 347 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 216 341 8.0E-17 T 11-11-2016 IPR012328 Chalcone/stilbene synthase, C-terminal S40542_RS08040 945312d08e792164d0d51e920f5ac24e 347 Gene3D G3DSA:3.40.47.10 208 343 1.1E-30 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS14210 b4f63623550d3f591dee27e94cec793c 393 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 4 385 2.6E-194 T 11-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 S40542_RS14210 b4f63623550d3f591dee27e94cec793c 393 PIRSF PIRSF001413 1 392 3.4E-167 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 S40542_RS14210 b4f63623550d3f591dee27e94cec793c 393 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 387 50.692 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 S40542_RS14210 b4f63623550d3f591dee27e94cec793c 393 SUPERFAMILY SSF53686 3 385 1.44E-142 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS14210 b4f63623550d3f591dee27e94cec793c 393 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 77 91 - T 11-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 S40542_RS14210 b4f63623550d3f591dee27e94cec793c 393 Gene3D G3DSA:3.40.50.1100 174 388 3.0E-94 T 11-11-2016 S40542_RS14210 b4f63623550d3f591dee27e94cec793c 393 Gene3D G3DSA:3.40.50.1100 95 173 3.5E-23 T 11-11-2016 S40542_RS14210 b4f63623550d3f591dee27e94cec793c 393 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 50 374 1.2E-49 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Pfam PF00072 Response regulator receiver domain 519 630 1.0E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SUPERFAMILY SSF47226 658 769 1.44E-20 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 9.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 9.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 9.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 9.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 502 1.8E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 340 2.2E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Pfam PF01627 Hpt domain 691 768 1.8E-8 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Pfam PF08448 PAS fold 156 265 3.6E-17 T 11-11-2016 IPR013656 PAS fold-4 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SUPERFAMILY SSF55785 135 261 6.93E-23 T 11-11-2016 IPR000014 PAS domain S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SMART SM00448 517 630 5.8E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SMART SM00388 276 341 3.3E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SMART SM00387 388 503 6.8E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Gene3D G3DSA:3.40.50.2300 509 635 7.0E-29 T 11-11-2016 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SMART SM00091 150 216 3.9E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SUPERFAMILY SSF52172 517 642 2.56E-26 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 270 5.9E-15 T 11-11-2016 IPR000014 PAS domain S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Gene3D G3DSA:1.20.120.160 672 769 1.4E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SUPERFAMILY SSF47384 264 342 2.55E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Gene3D G3DSA:3.30.565.10 343 508 5.0E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 PIRSF PIRSF003182 8 774 1.1E-197 T 11-11-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 SUPERFAMILY SSF55874 330 501 5.11E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Gene3D G3DSA:1.10.287.970 6 90 4.9E-5 T 11-11-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Gene3D G3DSA:1.10.287.130 269 336 2.4E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03250 0361f69e39e8a0170b0a9629139c8381 775 Gene3D G3DSA:3.30.450.20 135 261 4.5E-23 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 Gene3D G3DSA:1.10.40.60 100 215 1.4E-32 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 Gene3D G3DSA:1.10.40.60 219 286 1.6E-17 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 Gene3D G3DSA:3.30.1300.30 25 98 5.8E-32 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 Gene3D G3DSA:3.30.1300.30 287 325 5.8E-32 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 1.7E-84 T 11-11-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 SUPERFAMILY SSF158544 219 283 9.68E-13 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 SUPERFAMILY SSF158544 101 215 4.71E-27 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 SUPERFAMILY SSF54523 285 324 5.81E-30 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 SUPERFAMILY SSF54523 35 100 5.81E-30 T 11-11-2016 S40542_RS02105 80fbac9462eb7c63ae44323459bb0745 326 PIRSF PIRSF002786 1 324 1.5E-75 T 11-11-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 Gene3D G3DSA:1.10.3210.10 420 605 9.3E-21 T 11-11-2016 IPR006674 HD domain S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 SUPERFAMILY SSF81301 13 172 3.27E-18 T 11-11-2016 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 5.2E-37 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 Gene3D G3DSA:3.30.70.260 799 855 6.1E-6 T 11-11-2016 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 Pfam PF01966 HD domain 478 582 1.4E-10 T 11-11-2016 IPR006674 HD domain S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 Pfam PF01909 Nucleotidyltransferase domain 75 120 1.5E-4 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 Gene3D G3DSA:3.30.460.10 72 153 1.5E-6 T 11-11-2016 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 SUPERFAMILY SSF81593 185 311 2.51E-11 T 11-11-2016 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 SUPERFAMILY SSF81891 486 618 4.71E-13 T 11-11-2016 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 SUPERFAMILY SSF81891 373 451 4.71E-13 T 11-11-2016 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 872 270.393 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 SMART SM00471 446 593 2.0E-4 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 SUPERFAMILY SSF55021 799 848 1.71E-5 T 11-11-2016 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 PIRSF PIRSF006288 9 872 1.8E-280 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 S40542_RS06605 9176c2c2a5243b71a6f237db614badbf 872 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 33 867 2.2E-272 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 6.3E-19 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 6.3E-19 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 6.3E-19 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 6.3E-19 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 Pfam PF01084 Ribosomal protein S18 19 68 4.3E-25 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-21 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 Gene3D G3DSA:4.10.640.10 8 72 5.6E-32 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 4.0E-37 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.047 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 SUPERFAMILY SSF46911 3 71 1.28E-28 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01700 8ce1c60c1476899d7975a0609555563b 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-11-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 SUPERFAMILY SSF158472 180 231 7.98E-9 T 11-11-2016 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 SMART SM00388 235 299 2.0E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 Gene3D G3DSA:3.30.565.10 285 454 7.5E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 6.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 6.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 SUPERFAMILY SSF47384 221 299 1.77E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 Gene3D G3DSA:1.10.287.130 225 284 1.7E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 Pfam PF00672 HAMP domain 164 230 2.3E-16 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 SMART SM00387 344 455 3.4E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 454 2.1E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 SUPERFAMILY SSF55874 288 453 9.69E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 299 4.9E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS17920 c285666dd06166b5353bb10ef8a0e92f 456 SMART SM00304 180 234 3.6E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS16760 3ee70a3bee96ca1aea14fd0ebbc234ba 224 SUPERFAMILY SSF52980 5 222 8.04E-73 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 S40542_RS16760 3ee70a3bee96ca1aea14fd0ebbc234ba 224 Pfam PF02976 DNA mismatch repair enzyme MutH 55 153 7.5E-31 T 11-11-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 S40542_RS16760 3ee70a3bee96ca1aea14fd0ebbc234ba 224 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 7 222 2.3E-86 T 11-11-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 S40542_RS16760 3ee70a3bee96ca1aea14fd0ebbc234ba 224 SMART SM00927 55 153 2.9E-54 T 11-11-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 S40542_RS16760 3ee70a3bee96ca1aea14fd0ebbc234ba 224 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 224 124.69 T 11-11-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 S40542_RS16760 3ee70a3bee96ca1aea14fd0ebbc234ba 224 Gene3D G3DSA:3.40.600.10 3 222 4.2E-70 T 11-11-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 SUPERFAMILY SSF49265 34 103 1.81E-8 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 Gene3D G3DSA:2.60.40.10 34 111 1.3E-11 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS15200 cc699caa17de8340368b185e145787fc 606 SUPERFAMILY SSF46626 319 389 1.26E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 SUPERFAMILY SSF46626 190 278 1.26E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 SUPERFAMILY SSF46626 381 491 3.24E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 Pfam PF03150 Di-haem cytochrome c peroxidase 193 404 2.5E-29 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 Gene3D G3DSA:1.10.760.10 322 395 8.3E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 Gene3D G3DSA:1.10.760.10 190 281 8.3E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 Gene3D G3DSA:1.10.760.10 534 573 4.8E-25 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS15200 cc699caa17de8340368b185e145787fc 606 Gene3D G3DSA:1.10.760.10 396 493 4.8E-25 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 Gene3D G3DSA:3.40.50.850 1 230 6.7E-65 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 Gene3D G3DSA:1.10.1200.10 231 285 1.3E-7 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 SUPERFAMILY SSF52499 1 211 6.41E-61 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 SUPERFAMILY SSF47336 217 285 3.4E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 Pfam PF00550 Phosphopantetheine attachment site 219 282 2.4E-8 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 Pfam PF00857 Isochorismatase family 32 202 7.9E-37 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 PIRSF PIRSF001111 1 288 4.8E-123 T 11-11-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 PRINTS PR01398 Isochorismatase signature 185 202 4.0E-43 T 11-11-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 PRINTS PR01398 Isochorismatase signature 167 185 4.0E-43 T 11-11-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 PRINTS PR01398 Isochorismatase signature 2 14 4.0E-43 T 11-11-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 PRINTS PR01398 Isochorismatase signature 80 99 4.0E-43 T 11-11-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 PRINTS PR01398 Isochorismatase signature 63 80 4.0E-43 T 11-11-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 S40542_RS19755 19420970f20620df4e6f19bd84a7545c 288 PRINTS PR01398 Isochorismatase signature 111 133 4.0E-43 T 11-11-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 Gene3D G3DSA:3.40.190.10 189 238 7.3E-7 T 11-11-2016 S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 SUPERFAMILY SSF46785 4 112 3.63E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 Gene3D G3DSA:1.10.10.10 3 84 1.6E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 Gene3D G3DSA:3.40.190.10 88 188 3.0E-13 T 11-11-2016 S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 SUPERFAMILY SSF53850 89 268 2.35E-21 T 11-11-2016 S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.5E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02565 512a5918ba1935cc8bf11f07f0b975bb 281 Pfam PF03466 LysR substrate binding domain 88 276 5.1E-24 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.2E-51 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 SUPERFAMILY SSF74731 3 115 2.88E-50 T 11-11-2016 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.878 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 11-11-2016 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 Gene3D G3DSA:1.10.1900.20 55 117 3.1E-31 T 11-11-2016 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 Pfam PF00453 Ribosomal protein L20 3 109 4.8E-49 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS11360 43770fb3df1ca813362a9f845a54b640 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18785 8f96ee2a197e73d5e144f2dd61d2805b 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 140 9.8E-49 T 11-11-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 S40542_RS18785 8f96ee2a197e73d5e144f2dd61d2805b 152 SUPERFAMILY SSF89447 1 134 1.67E-44 T 11-11-2016 S40542_RS18785 8f96ee2a197e73d5e144f2dd61d2805b 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 8.5E-19 T 11-11-2016 IPR020603 MraZ domain S40542_RS18785 8f96ee2a197e73d5e144f2dd61d2805b 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 136 2.1E-17 T 11-11-2016 IPR020603 MraZ domain S40542_RS18785 8f96ee2a197e73d5e144f2dd61d2805b 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 50.985 T 11-11-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 S40542_RS18785 8f96ee2a197e73d5e144f2dd61d2805b 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 129 3.0E-58 T 11-11-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 S40542_RS15435 a860bc5289bfdc3cc0484d6837c9cee0 209 PIRSF PIRSF005461 1 209 3.7E-80 T 11-11-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 S40542_RS15435 a860bc5289bfdc3cc0484d6837c9cee0 209 Gene3D G3DSA:3.40.50.150 1 208 4.6E-74 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS15435 a860bc5289bfdc3cc0484d6837c9cee0 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 28.893 T 11-11-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 S40542_RS15435 a860bc5289bfdc3cc0484d6837c9cee0 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.5E-58 T 11-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 S40542_RS15435 a860bc5289bfdc3cc0484d6837c9cee0 209 SUPERFAMILY SSF53335 30 208 2.79E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS14215 b3232c931b23a31fcd2cb4b8e68683cf 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 2.9E-92 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 S40542_RS14215 b3232c931b23a31fcd2cb4b8e68683cf 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.678 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 S40542_RS14215 b3232c931b23a31fcd2cb4b8e68683cf 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.6E-102 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 S40542_RS14215 b3232c931b23a31fcd2cb4b8e68683cf 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-11-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 S40542_RS14215 b3232c931b23a31fcd2cb4b8e68683cf 268 SUPERFAMILY SSF51366 1 266 5.56E-89 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 S40542_RS14215 b3232c931b23a31fcd2cb4b8e68683cf 268 Gene3D G3DSA:3.20.20.70 1 266 1.4E-95 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS04905 8fccbc8c936778896446375b35e75a2d 409 ProSitePatterns PS01219 Ammonium transporters signature. 161 186 - T 11-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 S40542_RS04905 8fccbc8c936778896446375b35e75a2d 409 Pfam PF00909 Ammonium Transporter Family 17 400 4.7E-98 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 S40542_RS04905 8fccbc8c936778896446375b35e75a2d 409 SUPERFAMILY SSF111352 11 381 5.1E-104 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 S40542_RS04905 8fccbc8c936778896446375b35e75a2d 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 10 403 7.3E-202 T 11-11-2016 IPR019879 Ammonium transporter, marine subtype S40542_RS04905 8fccbc8c936778896446375b35e75a2d 409 Gene3D G3DSA:1.10.3430.10 10 381 5.4E-107 T 11-11-2016 IPR029020 Ammonium/urea transporter S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 378 446 1.0E-31 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 Gene3D G3DSA:3.40.50.300 127 298 1.6E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 Pfam PF00308 Bacterial dnaA protein 135 351 6.8E-100 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 468 34.495 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 Pfam PF11638 DnaA N-terminal domain 4 63 5.5E-19 T 11-11-2016 IPR024633 DnaA N-terminal domain S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 SMART SM00382 166 375 2.8E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 SMART SM00760 377 446 3.0E-44 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 Gene3D G3DSA:1.10.1750.10 368 468 4.4E-42 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 467 9.1E-189 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 SUPERFAMILY SSF52540 135 345 1.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 Gene3D G3DSA:1.10.8.60 300 367 2.4E-31 T 11-11-2016 S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 ProSitePatterns PS01008 DnaA protein signature. 427 446 - T 11-11-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 SUPERFAMILY SSF48295 366 468 1.39E-37 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 167 187 3.1E-53 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 231 245 3.1E-53 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 265 292 3.1E-53 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 427 446 3.1E-53 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like S40542_RS00005 800ac607ee7ddd851df1e3226de1ddcd 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 199 213 3.1E-53 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 1.7E-77 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 11-11-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 SUPERFAMILY SSF51905 1 313 1.02E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 Gene3D G3DSA:3.50.50.60 119 235 2.5E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 2.1E-123 T 11-11-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 3.2E-40 T 11-11-2016 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 3.2E-40 T 11-11-2016 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.2E-40 T 11-11-2016 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.2E-40 T 11-11-2016 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 3.2E-40 T 11-11-2016 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 Gene3D G3DSA:3.50.50.60 3 118 3.4E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 Gene3D G3DSA:3.50.50.60 236 314 3.0E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09410 c753da6fa31ce8748d400aa25c73280c 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 299 1.7E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12155 2beed57a7be966b4bfd05b32eefbf227 404 Pfam PF00155 Aminotransferase class I and II 34 392 5.1E-49 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS12155 2beed57a7be966b4bfd05b32eefbf227 404 Gene3D G3DSA:3.40.640.10 51 279 3.5E-66 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS12155 2beed57a7be966b4bfd05b32eefbf227 404 SUPERFAMILY SSF53383 7 402 2.79E-93 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS12155 2beed57a7be966b4bfd05b32eefbf227 404 Gene3D G3DSA:3.90.1150.10 280 403 1.2E-38 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS03030 5d38fc78e2f0a65fec3066cd7f63a26e 315 Pfam PF01758 Sodium Bile acid symporter family 36 213 3.7E-42 T 11-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 SUPERFAMILY SSF52172 4 180 9.39E-24 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03710 8589380c800d4f678878cb6484f79046 217 Gene3D G3DSA:3.40.50.2300 3 127 6.3E-27 T 11-11-2016 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 SMART SM00421 148 205 1.3E-21 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 Pfam PF00072 Response regulator receiver domain 5 116 1.8E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 SMART SM00448 2 116 1.5E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 Gene3D G3DSA:1.10.10.10 140 209 1.6E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03710 8589380c800d4f678878cb6484f79046 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.4E-20 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.7E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.7E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03710 8589380c800d4f678878cb6484f79046 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.7E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03245 e2b6ead8bff8ade6a576dc5552e1d25e 306 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 299 34.295 T 11-11-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442 S40542_RS03245 e2b6ead8bff8ade6a576dc5552e1d25e 306 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 294 2.0E-75 T 11-11-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442 S40542_RS03245 e2b6ead8bff8ade6a576dc5552e1d25e 306 Gene3D G3DSA:3.10.270.10 4 164 1.5E-80 T 11-11-2016 S40542_RS03245 e2b6ead8bff8ade6a576dc5552e1d25e 306 Gene3D G3DSA:3.10.270.10 197 296 1.5E-80 T 11-11-2016 S40542_RS16430 59da05ec509b61a8e3b9b7c446cf50cf 270 Gene3D G3DSA:2.160.20.20 136 264 4.1E-6 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like S40542_RS16430 59da05ec509b61a8e3b9b7c446cf50cf 270 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 20 100 4.3E-20 T 11-11-2016 IPR013046 Phage baseplate assembly protein V/Gp45 S40542_RS16430 59da05ec509b61a8e3b9b7c446cf50cf 270 Pfam PF04717 Type VI secretion system, phage-baseplate injector 14 106 1.8E-25 T 11-11-2016 IPR006531 Gp5 N-terminal S40542_RS16430 59da05ec509b61a8e3b9b7c446cf50cf 270 SUPERFAMILY SSF69349 165 251 3.14E-8 T 11-11-2016 S40542_RS02065 fde40128a267ba76e06a86f6498da1ce 298 Gene3D G3DSA:2.30.42.10 244 296 1.2E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS02065 fde40128a267ba76e06a86f6498da1ce 298 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 23 296 4.1E-62 T 11-11-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 S40542_RS02065 fde40128a267ba76e06a86f6498da1ce 298 SUPERFAMILY SSF50156 204 297 5.89E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS02065 fde40128a267ba76e06a86f6498da1ce 298 Pfam PF11356 Type II secretion system protein C 27 166 2.7E-34 T 11-11-2016 IPR024961 Type II secretion system protein C, N-terminal S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF00975 Thioesterase domain 2187 2317 5.3E-11 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF47336 1037 1109 6.41E-19 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF00550 Phosphopantetheine attachment site 1046 1108 4.6E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF00550 Phosphopantetheine attachment site 2102 2164 3.6E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:3.40.50.980 530 695 6.0E-43 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:3.40.50.1820 2172 2289 6.4E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:3.40.50.1820 2335 2412 6.4E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF56801 492 1057 1.96E-127 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1734 1745 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:3.40.50.980 1578 1740 7.1E-45 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:1.10.1200.10 1048 1113 3.6E-26 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:1.10.1200.10 2088 2171 4.7E-23 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF52777 1308 1547 5.11E-51 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:3.30.300.30 932 1047 3.4E-36 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF00501 AMP-binding enzyme 537 937 2.6E-82 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF00501 AMP-binding enzyme 1584 1993 1.5E-88 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF00668 Condensation domain 1125 1415 1.0E-65 T 11-11-2016 IPR001242 Condensation domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF00668 Condensation domain 76 377 1.2E-53 T 11-11-2016 IPR001242 Condensation domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF13745 HxxPF-repeated domain 1438 1529 4.0E-24 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF47336 2092 2166 7.07E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 ProSitePatterns PS00455 Putative AMP-binding domain signature. 686 697 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF52777 1127 1297 1.56E-38 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SMART SM00823 Phosphopantetheine attachment site 1044 1113 0.0043 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SMART SM00823 Phosphopantetheine attachment site 2100 2169 0.13 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1605 2017 1.6E-121 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 556 961 3.1E-119 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF52777 260 502 7.89E-36 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF53474 2167 2373 1.0E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF52777 83 258 2.11E-29 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF13193 AMP-binding enzyme C-terminal domain 2001 2075 5.0E-10 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Pfam PF13193 AMP-binding enzyme C-terminal domain 945 1019 1.3E-5 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:3.40.50.980 1741 1898 1.5E-33 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:3.40.50.980 696 838 7.5E-30 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:2.30.38.10 844 927 2.9E-25 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:2.30.38.10 1899 1983 8.0E-27 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 SUPERFAMILY SSF56801 1543 2112 3.53E-142 T 11-11-2016 S40542_RS13745 c0044ba5b70404a7d92bf288d1f46126 2422 Gene3D G3DSA:3.30.300.30 1987 2085 7.8E-33 T 11-11-2016 S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 243 5.6E-65 T 11-11-2016 S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.2E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.3E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.3E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.3E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-52 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 SUPERFAMILY SSF51735 8 247 3.73E-83 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 191 2.5E-5 T 11-11-2016 S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 4.2E-100 T 11-11-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS14415 3e27d507724e45393aa6313ebd578bdb 248 Gene3D G3DSA:3.40.50.720 3 247 9.9E-88 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-11-2016 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 Gene3D G3DSA:3.30.190.20 161 225 1.1E-47 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 Gene3D G3DSA:3.30.190.20 18 68 1.1E-47 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 Gene3D G3DSA:3.40.50.790 69 159 1.6E-41 T 11-11-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.4E-53 T 11-11-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 PIRSF PIRSF002155 1 227 6.3E-80 T 11-11-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 SUPERFAMILY SSF56808 6 225 3.4E-83 T 11-11-2016 IPR023674 Ribosomal protein L1-like S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.668 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 S40542_RS19550 f3f8dccc2a141c02f3ab779d63380f5a 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 8.1E-108 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 S40542_RS17840 7c1b38103d1f62b6d6897872b68c5eb9 108 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 19 94 1.5E-17 T 11-11-2016 S40542_RS17840 7c1b38103d1f62b6d6897872b68c5eb9 108 SUPERFAMILY SSF54292 19 100 1.27E-17 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS17840 7c1b38103d1f62b6d6897872b68c5eb9 108 Gene3D G3DSA:3.10.20.30 22 93 5.8E-6 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS17840 7c1b38103d1f62b6d6897872b68c5eb9 108 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 29 86 1.4E-4 T 11-11-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 SUPERFAMILY SSF55545 220 340 1.83E-19 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 798 873 1.2E-15 T 11-11-2016 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 SUPERFAMILY SSF49384 34 206 7.11E-31 T 11-11-2016 IPR008965 Carbohydrate-binding domain GO:0030246 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 Gene3D G3DSA:3.30.379.10 219 338 8.4E-19 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 SUPERFAMILY SSF51445 341 764 5.87E-118 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 Gene3D G3DSA:2.60.40.320 828 874 3.3E-13 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 341 754 1.8E-93 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 Pfam PF03173 Putative carbohydrate binding domain 44 183 6.4E-27 T 11-11-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 302 322 1.2E-44 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 335 352 1.2E-44 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 532 545 1.2E-44 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 364 385 1.2E-44 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 736 753 1.2E-44 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 718 734 1.2E-44 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 439 456 1.2E-44 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 PRINTS PR00738 Glycosyl hydrolase family 20 signature 505 523 1.2E-44 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 SMART SM01081 42 204 3.9E-30 T 11-11-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 221 338 1.9E-13 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 Gene3D G3DSA:2.60.40.290 34 165 3.4E-29 T 11-11-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 Gene3D G3DSA:3.20.20.80 339 827 2.4E-127 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS00910 59acf6568a78d0c30b3b8c103d98154e 884 SUPERFAMILY SSF81296 778 874 5.74E-19 T 11-11-2016 IPR014756 Immunoglobulin E-set S40542_RS17870 b81792ee3c4aff2f6a4364baf8776753 311 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 57 7.9E-18 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain S40542_RS17870 b81792ee3c4aff2f6a4364baf8776753 311 Pfam PF00691 OmpA family 189 287 8.5E-18 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS17870 b81792ee3c4aff2f6a4364baf8776753 311 Gene3D G3DSA:3.30.1330.60 167 293 1.2E-28 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS17870 b81792ee3c4aff2f6a4364baf8776753 311 SUPERFAMILY SSF103088 176 293 1.09E-28 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 SUPERFAMILY SSF51735 135 234 1.3E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 SUPERFAMILY SSF51735 304 443 1.3E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 157 1.1E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 228 1.1E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 390 407 1.1E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 369 388 1.1E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 Pfam PF00106 short chain dehydrogenase 140 260 4.7E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 304 405 9.0E-11 T 11-11-2016 S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 Gene3D G3DSA:3.40.50.720 121 226 2.7E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03410 3e6b3f3d0062536a1dfa8ed2348020c8 459 Gene3D G3DSA:3.40.50.720 300 435 2.7E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 SUPERFAMILY SSF52172 448 565 1.35E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 Pfam PF05230 MASE2 domain 21 106 2.0E-14 T 11-11-2016 IPR007894 MASE2 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 SMART SM00387 317 429 5.6E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.8E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.8E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.8E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.8E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 428 2.0E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 SUPERFAMILY SSF55874 259 431 7.47E-47 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 SUPERFAMILY SSF47384 190 271 8.83E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 Pfam PF00072 Response regulator receiver domain 452 556 1.1E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 Gene3D G3DSA:1.10.287.130 198 266 2.8E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 Gene3D G3DSA:3.40.50.2300 440 565 1.6E-36 T 11-11-2016 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 269 4.8E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 SMART SM00388 205 270 4.2E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 SMART SM00448 450 561 3.1E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13980 264d62d818df508dbdb9d923d9b7bd2b 566 Gene3D G3DSA:3.30.565.10 271 432 1.7E-47 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 SUPERFAMILY SSF51735 1 152 1.3E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.1E-31 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.1E-31 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.1E-31 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.1E-31 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.1E-31 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 Gene3D G3DSA:3.30.70.1450 391 436 4.8E-5 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 SUPERFAMILY SSF51735 233 376 1.84E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 SUPERFAMILY SSF116726 150 226 6.41E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 Pfam PF02254 TrkA-N domain 3 111 5.3E-28 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 Pfam PF02254 TrkA-N domain 235 350 1.0E-25 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 SUPERFAMILY SSF116726 361 437 3.66E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 Pfam PF02080 TrkA-C domain 391 437 1.1E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 Pfam PF02080 TrkA-C domain 156 225 1.1E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 Gene3D G3DSA:3.40.50.720 233 376 8.1E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00080 fecaafca695254d3842e04bb115465ff 458 Gene3D G3DSA:3.40.50.720 1 151 2.7E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 Gene3D G3DSA:3.40.50.620 11 226 7.1E-84 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 Gene3D G3DSA:1.10.240.10 227 324 2.0E-37 T 11-11-2016 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 398 48.596 T 11-11-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 SUPERFAMILY SSF55174 319 398 5.63E-17 T 11-11-2016 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 SUPERFAMILY SSF52374 8 315 4.79E-97 T 11-11-2016 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 SMART SM00363 336 399 1.5E-4 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 Pfam PF01479 S4 domain 339 381 7.4E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 4.5E-77 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 9 398 9.2E-121 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 3.4E-24 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 199 3.4E-24 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 210 222 3.4E-24 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 3.4E-24 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 S40542_RS03225 2f48c2ad654bfe9e92f04bcae7d956c5 399 Gene3D G3DSA:3.10.290.10 325 398 1.0E-24 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS18195 56d6980a055883e41076d73943facdc9 549 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 281 541 9.1E-75 T 11-11-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 S40542_RS18195 56d6980a055883e41076d73943facdc9 549 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 545 8.7E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS18195 56d6980a055883e41076d73943facdc9 549 SUPERFAMILY SSF161098 253 531 9.03E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS18195 56d6980a055883e41076d73943facdc9 549 Gene3D G3DSA:1.10.3720.10 284 543 5.7E-50 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 Pfam PF02872 5'-nucleotidase, C-terminal domain 391 584 9.1E-27 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 SUPERFAMILY SSF55816 393 627 1.7E-40 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 PRINTS PR01607 Apyrase family signature 559 578 2.9E-27 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 PRINTS PR01607 Apyrase family signature 272 295 2.9E-27 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 PRINTS PR01607 Apyrase family signature 314 334 2.9E-27 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 PRINTS PR01607 Apyrase family signature 459 482 2.9E-27 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 PRINTS PR01607 Apyrase family signature 244 261 2.9E-27 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 PRINTS PR01607 Apyrase family signature 44 62 2.9E-27 T 11-11-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 ProSitePatterns PS00786 5'-nucleotidase signature 2. 132 143 - T 11-11-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 ProSitePatterns PS00785 5'-nucleotidase signature 1. 46 58 - T 11-11-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 SUPERFAMILY SSF56300 41 388 8.54E-78 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 Gene3D G3DSA:3.60.21.10 41 387 1.6E-87 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 Pfam PF00149 Calcineurin-like phosphoesterase 47 289 1.9E-11 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 S40542_RS02950 b4055bd5d86edb70a16ba17c6d6da97c 677 Gene3D G3DSA:3.90.780.10 391 628 9.5E-44 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 SMART SM01049 47 130 5.0E-20 T 11-11-2016 IPR033480 Single Cache domain 2 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 SUPERFAMILY SSF58104 235 544 4.32E-71 T 11-11-2016 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 542 1.4E-46 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 SMART SM00283 282 543 2.6E-67 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 Gene3D G3DSA:3.30.450.20 30 180 1.6E-37 T 11-11-2016 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 SMART SM00304 213 267 9.7E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 Gene3D G3DSA:1.10.287.950 296 510 9.5E-52 T 11-11-2016 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 Pfam PF17200 Single Cache domain 2 47 188 8.0E-36 T 11-11-2016 IPR033480 Single Cache domain 2 S40542_RS02745 faaf5d5a86df2ca8f95fc491f77a1aed 545 Pfam PF00672 HAMP domain 197 263 5.3E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 Gene3D G3DSA:3.30.250.10 268 326 1.4E-27 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 PRINTS PR00142 RecA protein signature 243 272 1.1E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 PRINTS PR00142 RecA protein signature 127 156 1.1E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 PRINTS PR00142 RecA protein signature 165 194 1.1E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 PRINTS PR00142 RecA protein signature 93 122 1.1E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 PRINTS PR00142 RecA protein signature 210 238 1.1E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 PRINTS PR00142 RecA protein signature 297 314 1.1E-82 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 SUPERFAMILY SSF52540 3 266 1.16E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 SMART SM00382 57 228 2.2E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 Gene3D G3DSA:3.40.50.300 28 266 3.1E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.6E-173 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 ProSitePatterns PS00321 recA signature. 213 221 - T 11-11-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 Hamap MF_00268 Protein RecA [recA]. 5 329 51.527 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.3E-146 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 S40542_RS17940 f75515be9bf21935ac6dcf64aa82ab08 349 SUPERFAMILY SSF54752 268 325 2.62E-20 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal S40542_RS24355 bb4f11e2a1da936b91cc72de2bd00e95 140 Gene3D G3DSA:2.170.130.10 2 100 1.3E-19 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS24355 bb4f11e2a1da936b91cc72de2bd00e95 140 Pfam PF07715 TonB-dependent Receptor Plug Domain 6 89 6.4E-9 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS24355 bb4f11e2a1da936b91cc72de2bd00e95 140 SUPERFAMILY SSF56935 2 138 8.7E-25 T 11-11-2016 S40542_RS24355 bb4f11e2a1da936b91cc72de2bd00e95 140 Gene3D G3DSA:2.40.170.20 101 139 6.5E-5 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS19605 ec675c827211701060ce79274e46d997 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.6E-11 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS19605 ec675c827211701060ce79274e46d997 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 4.6E-11 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS19605 ec675c827211701060ce79274e46d997 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.6E-11 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS19605 ec675c827211701060ce79274e46d997 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 4.6E-11 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS19605 ec675c827211701060ce79274e46d997 256 Gene3D G3DSA:3.40.190.80 155 252 1.7E-40 T 11-11-2016 S40542_RS19605 ec675c827211701060ce79274e46d997 256 Pfam PF00459 Inositol monophosphatase family 6 243 3.9E-49 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS19605 ec675c827211701060ce79274e46d997 256 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 6 252 3.5E-100 T 11-11-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 S40542_RS19605 ec675c827211701060ce79274e46d997 256 Gene3D G3DSA:3.30.540.10 4 154 2.2E-45 T 11-11-2016 S40542_RS19605 ec675c827211701060ce79274e46d997 256 SUPERFAMILY SSF56655 4 251 1.28E-75 T 11-11-2016 S40542_RS19605 ec675c827211701060ce79274e46d997 256 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 11-11-2016 IPR020583 Inositol monophosphatase, metal-binding site S40542_RS07790 d2ebb7e7a0109291f2d447980dfc11ce 356 Pfam PF07143 CrtC N-terminal lipocalin domain 61 228 9.3E-46 T 11-11-2016 IPR010791 AttH domain S40542_RS07790 d2ebb7e7a0109291f2d447980dfc11ce 356 Gene3D G3DSA:2.40.370.10 234 356 1.8E-30 T 11-11-2016 IPR023374 AttH-like domain S40542_RS07790 d2ebb7e7a0109291f2d447980dfc11ce 356 Pfam PF17186 Lipocalin-like domain 233 356 2.9E-28 T 11-11-2016 IPR033451 AttH, lipocalin-like domain S40542_RS07790 d2ebb7e7a0109291f2d447980dfc11ce 356 SUPERFAMILY SSF159245 40 356 4.71E-76 T 11-11-2016 S40542_RS07790 d2ebb7e7a0109291f2d447980dfc11ce 356 Gene3D G3DSA:2.40.370.10 49 231 1.0E-53 T 11-11-2016 IPR023374 AttH-like domain S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 SUPERFAMILY SSF51735 2 253 6.0E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 Gene3D G3DSA:3.40.50.720 2 249 3.7E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 8.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 Pfam PF00106 short chain dehydrogenase 3 189 3.5E-42 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.5E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.5E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS11355 17edac4aca3d7abca2f2f53148ed4742 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.5E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS02885 d3067ac0690453daa8509203383b1a8c 307 SUPERFAMILY SSF46785 8 86 1.84E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02885 d3067ac0690453daa8509203383b1a8c 307 SUPERFAMILY SSF53850 95 302 1.07E-34 T 11-11-2016 S40542_RS02885 d3067ac0690453daa8509203383b1a8c 307 Gene3D G3DSA:3.40.190.10 278 305 6.3E-24 T 11-11-2016 S40542_RS02885 d3067ac0690453daa8509203383b1a8c 307 Gene3D G3DSA:3.40.190.10 95 177 6.3E-24 T 11-11-2016 S40542_RS02885 d3067ac0690453daa8509203383b1a8c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.0E-13 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02885 d3067ac0690453daa8509203383b1a8c 307 Gene3D G3DSA:3.40.190.10 178 273 1.3E-17 T 11-11-2016 S40542_RS02885 d3067ac0690453daa8509203383b1a8c 307 Gene3D G3DSA:1.10.10.10 7 86 3.4E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02885 d3067ac0690453daa8509203383b1a8c 307 Pfam PF03466 LysR substrate binding domain 99 301 5.4E-22 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.865 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 SUPERFAMILY SSF51246 329 424 1.02E-31 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 SMART SM01209 103 296 1.3E-145 T 11-11-2016 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 SUPERFAMILY SSF52440 1 103 4.32E-36 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 Gene3D G3DSA:3.30.470.20 191 328 3.4E-63 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-11-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 SMART SM01210 330 423 5.3E-51 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 Gene3D G3DSA:3.30.1490.20 121 190 1.3E-34 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 7.1E-35 T 11-11-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.5E-181 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 1.3E-29 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 Gene3D G3DSA:3.90.600.10 330 423 4.7E-35 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 SUPERFAMILY SSF56059 104 318 1.73E-67 T 11-11-2016 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.1E-84 T 11-11-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS18050 68dfaff27a67859cb4fa6daf61b9047e 427 Gene3D G3DSA:3.40.50.20 2 95 1.8E-36 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 SUPERFAMILY SSF50129 3 189 3.5E-74 T 11-11-2016 IPR011032 GroES-like S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 6 373 4.4E-225 T 11-11-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 SMART SM00829 14 371 7.4E-4 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 Gene3D G3DSA:3.90.180.10 3 193 5.9E-71 T 11-11-2016 IPR011032 GroES-like S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 Gene3D G3DSA:3.40.50.720 194 313 1.3E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 158 1.4E-26 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 SUPERFAMILY SSF50129 322 373 5.65E-12 T 11-11-2016 IPR011032 GroES-like S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 SUPERFAMILY SSF51735 164 338 1.71E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09260 a34ac70a4e431053b3a6dd054d41f1ac 373 Pfam PF00107 Zinc-binding dehydrogenase 201 329 3.8E-24 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 S40542_RS03500 150c4a02b42c05c0dc64df340f16d4ff 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 35.559 T 11-11-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS03500 150c4a02b42c05c0dc64df340f16d4ff 214 SUPERFAMILY SSF53271 1 212 4.83E-48 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS03500 150c4a02b42c05c0dc64df340f16d4ff 214 Gene3D G3DSA:3.40.50.2020 6 212 4.8E-83 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS03500 150c4a02b42c05c0dc64df340f16d4ff 214 Pfam PF00156 Phosphoribosyl transferase domain 48 160 1.9E-12 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 S40542_RS03500 150c4a02b42c05c0dc64df340f16d4ff 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 6.5E-65 T 11-11-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS06340 4af3fa65aefdb9dc1eb009144e71cca1 263 Pfam PF00669 Bacterial flagellin N-terminal helical region 12 136 6.4E-27 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06340 4af3fa65aefdb9dc1eb009144e71cca1 263 Gene3D G3DSA:1.20.1330.10 48 218 4.4E-44 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06340 4af3fa65aefdb9dc1eb009144e71cca1 263 Pfam PF00700 Bacterial flagellin C-terminal helical region 178 262 4.5E-18 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06340 4af3fa65aefdb9dc1eb009144e71cca1 263 PRINTS PR00207 Flagellin signature 31 48 1.6E-16 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06340 4af3fa65aefdb9dc1eb009144e71cca1 263 PRINTS PR00207 Flagellin signature 70 89 1.6E-16 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06340 4af3fa65aefdb9dc1eb009144e71cca1 263 PRINTS PR00207 Flagellin signature 105 128 1.6E-16 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06340 4af3fa65aefdb9dc1eb009144e71cca1 263 SUPERFAMILY SSF64518 12 263 9.94E-63 T 11-11-2016 S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 388 6.4E-126 T 11-11-2016 IPR017687 Outer membrane protein assembly factor BamB S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 390 37.449 T 11-11-2016 IPR017687 Outer membrane protein assembly factor BamB S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 Pfam PF13360 PQQ-like domain 90 317 2.5E-43 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 Gene3D G3DSA:2.140.10.10 1 390 2.8E-74 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 SUPERFAMILY SSF50998 30 382 1.31E-79 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 SMART SM00564 249 280 17.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 SMART SM00564 287 318 0.0097 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 SMART SM00564 152 184 0.0095 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 SMART SM00564 197 229 160.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 SMART SM00564 60 91 0.21 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 SMART SM00564 328 359 0.015 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat S40542_RS04020 74db175e6cb90d3771e2745c099b84dc 391 SMART SM00564 112 144 0.0014 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat S40542_RS14945 15cf9c62eaf70bfff33fe03c3c84466c 508 PIRSF PIRSF001394 1 507 1.8E-216 T 11-11-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 S40542_RS14945 15cf9c62eaf70bfff33fe03c3c84466c 508 SUPERFAMILY SSF117457 317 489 9.55E-64 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 S40542_RS14945 15cf9c62eaf70bfff33fe03c3c84466c 508 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 2.2E-98 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 S40542_RS14945 15cf9c62eaf70bfff33fe03c3c84466c 508 Pfam PF05683 Fumarase C-terminus 289 491 1.3E-82 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 S40542_RS14945 15cf9c62eaf70bfff33fe03c3c84466c 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 487 2.3E-50 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 S40542_RS14945 15cf9c62eaf70bfff33fe03c3c84466c 508 Gene3D G3DSA:3.20.130.10 303 490 7.4E-74 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 S40542_RS14945 15cf9c62eaf70bfff33fe03c3c84466c 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 284 1.7E-61 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 S40542_RS00975 c25b386f6a0377eec7cbf3076df7f7d5 118 Gene3D G3DSA:1.10.8.50 2 71 9.9E-27 T 11-11-2016 S40542_RS00975 c25b386f6a0377eec7cbf3076df7f7d5 118 Gene3D G3DSA:4.10.910.10 72 118 3.3E-25 T 11-11-2016 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00975 c25b386f6a0377eec7cbf3076df7f7d5 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-50 T 11-11-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS00975 c25b386f6a0377eec7cbf3076df7f7d5 118 PIRSF PIRSF002134 1 118 1.0E-38 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00975 c25b386f6a0377eec7cbf3076df7f7d5 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-11-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00975 c25b386f6a0377eec7cbf3076df7f7d5 118 SUPERFAMILY SSF46946 2 114 2.15E-42 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 S40542_RS00975 c25b386f6a0377eec7cbf3076df7f7d5 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.9E-29 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00975 c25b386f6a0377eec7cbf3076df7f7d5 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 24.391 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 SUPERFAMILY SSF54782 223 311 3.79E-28 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 Gene3D G3DSA:3.40.190.10 5 112 4.9E-50 T 11-11-2016 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 Gene3D G3DSA:3.40.190.10 113 201 1.8E-39 T 11-11-2016 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 PRINTS PR00151 Porphobilinogen deaminase signature 126 143 1.2E-51 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 PRINTS PR00151 Porphobilinogen deaminase signature 47 67 1.2E-51 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 1.2E-51 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 PRINTS PR00151 Porphobilinogen deaminase signature 78 97 1.2E-51 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 PRINTS PR00151 Porphobilinogen deaminase signature 145 162 1.2E-51 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 SUPERFAMILY SSF53850 7 221 1.88E-86 T 11-11-2016 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 Gene3D G3DSA:3.30.160.40 223 307 1.0E-28 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 297 2.3E-22 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 PIRSF PIRSF001438 1 312 2.1E-124 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 8 215 8.2E-81 T 11-11-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 7 299 39.881 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 233 249 - T 11-11-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20110 66b8861cf5d74efe7c2681bdfdb20616 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 8 299 7.1E-113 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS13665 af812ddbb7bee5f0c5acab6eaa5470bc 205 SUPERFAMILY SSF52833 1 204 4.21E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS13665 af812ddbb7bee5f0c5acab6eaa5470bc 205 Pfam PF13743 Thioredoxin 7 194 6.1E-15 T 11-11-2016 S40542_RS13665 af812ddbb7bee5f0c5acab6eaa5470bc 205 Gene3D G3DSA:1.10.472.60 46 160 2.3E-35 T 11-11-2016 IPR023169 UPF0413, central domain S40542_RS13665 af812ddbb7bee5f0c5acab6eaa5470bc 205 Gene3D G3DSA:3.40.30.10 3 45 2.7E-5 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS13665 af812ddbb7bee5f0c5acab6eaa5470bc 205 Gene3D G3DSA:3.40.30.10 161 203 2.7E-5 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 493 505 2.9E-22 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 514 530 2.9E-22 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 585 596 2.9E-22 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 475 487 2.9E-22 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 SUPERFAMILY SSF55486 40 687 1.45E-223 T 11-11-2016 S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 Gene3D G3DSA:3.40.390.10 474 687 2.7E-113 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 Gene3D G3DSA:3.40.390.10 313 434 2.7E-113 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 Pfam PF05649 Peptidase family M13 52 431 4.5E-103 T 11-11-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 S40542_RS18690 8444f68b476623f3a2845271a8f9dfd8 687 Pfam PF01431 Peptidase family M13 483 684 3.0E-79 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.30.300.30 2379 2491 3.3E-38 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.30.300.30 3409 3522 1.5E-34 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.30.300.30 895 1008 3.4E-39 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3162 3173 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 2573 2745 1.1E-38 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 ProSitePatterns PS00455 Putative AMP-binding domain signature. 644 655 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 1543 1732 4.34E-35 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 1250 1515 3.56E-32 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF13745 HxxPF-repeated domain 361 450 1.6E-18 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF13745 HxxPF-repeated domain 2885 2971 2.6E-18 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF13745 HxxPF-repeated domain 3923 4011 7.5E-13 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00550 Phosphopantetheine attachment site 2490 2549 1.1E-5 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00550 Phosphopantetheine attachment site 1008 1069 2.2E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00550 Phosphopantetheine attachment site 3520 3583 1.2E-8 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 1719 1972 1.22E-44 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 3790 4030 4.89E-48 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF56801 2990 3531 2.09E-130 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1384 1538 1.6E-37 T 11-11-2016 IPR010060 Non-ribosomal peptide synthase S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.40.50.980 3024 3168 6.1E-35 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.40.50.980 500 649 1.1E-44 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:2.30.38.10 3326 3404 2.6E-24 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:2.30.38.10 812 890 8.9E-26 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:2.30.38.10 2295 2374 5.9E-24 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1029 1044 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3049 3438 3.9E-119 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 527 924 1.9E-133 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2024 2408 7.9E-118 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF47336 3512 3582 1.83E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:1.10.1200.10 3523 3589 1.7E-21 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:1.10.1200.10 1009 1074 1.4E-26 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:1.10.1200.10 2492 2558 4.5E-22 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 2753 2999 2.45E-44 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 1082 1256 2.45E-22 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00668 Condensation domain 1083 1378 1.2E-43 T 11-11-2016 IPR001242 Condensation domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00668 Condensation domain 49 339 3.1E-56 T 11-11-2016 IPR001242 Condensation domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00668 Condensation domain 2573 2862 1.1E-63 T 11-11-2016 IPR001242 Condensation domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00668 Condensation domain 1546 1833 1.4E-56 T 11-11-2016 IPR001242 Condensation domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00668 Condensation domain 3603 3901 3.6E-69 T 11-11-2016 IPR001242 Condensation domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00501 AMP-binding enzyme 508 900 1.8E-92 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00501 AMP-binding enzyme 2002 2384 8.5E-84 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF00501 AMP-binding enzyme 3031 3414 2.2E-74 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF47336 2480 2552 2.09E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF13193 AMP-binding enzyme C-terminal domain 3422 3493 1.6E-9 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF13193 AMP-binding enzyme C-terminal domain 908 980 8.4E-10 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Pfam PF13193 AMP-binding enzyme C-terminal domain 2393 2463 1.5E-7 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.40.50.980 2150 2294 2.4E-33 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.40.50.980 3169 3325 1.9E-32 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.40.50.980 650 811 2.1E-46 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF56801 1965 2500 1.06E-130 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF56801 472 1017 1.7E-156 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SMART SM00823 Phosphopantetheine attachment site 1005 1073 3.3E-6 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 3608 3782 1.22E-40 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 45 220 2.22E-34 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF52777 228 479 2.45E-45 T 11-11-2016 S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 SUPERFAMILY SSF47336 997 1069 1.44E-18 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19805 3a98a5769d3644cdbc07412c9e5502a5 4054 Gene3D G3DSA:3.40.50.980 2000 2149 1.5E-43 T 11-11-2016 S40542_RS09365 230efcc81e65d710cd88973e8edbf008 366 Gene3D G3DSA:2.30.30.280 215 281 1.4E-31 T 11-11-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 S40542_RS09365 230efcc81e65d710cd88973e8edbf008 366 Gene3D G3DSA:3.40.50.620 4 213 4.4E-99 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS09365 230efcc81e65d710cd88973e8edbf008 366 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 361 1.9E-152 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 S40542_RS09365 230efcc81e65d710cd88973e8edbf008 366 Pfam PF03054 tRNA methyl transferase 8 361 7.9E-144 T 11-11-2016 S40542_RS09365 230efcc81e65d710cd88973e8edbf008 366 Gene3D G3DSA:2.40.30.10 283 365 1.4E-31 T 11-11-2016 S40542_RS09365 230efcc81e65d710cd88973e8edbf008 366 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 41.067 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 S40542_RS09365 230efcc81e65d710cd88973e8edbf008 366 SUPERFAMILY SSF52402 6 296 1.87E-56 T 11-11-2016 S40542_RS06255 a4f79e3298e1fd469a1378a86f62688f 351 Gene3D G3DSA:3.40.50.920 200 323 1.5E-26 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS06255 a4f79e3298e1fd469a1378a86f62688f 351 SUPERFAMILY SSF52518 5 183 5.03E-49 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS06255 a4f79e3298e1fd469a1378a86f62688f 351 SUPERFAMILY SSF52922 200 325 6.81E-24 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS06255 a4f79e3298e1fd469a1378a86f62688f 351 SMART SM00861 6 181 6.8E-35 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS06255 a4f79e3298e1fd469a1378a86f62688f 351 Gene3D G3DSA:3.40.50.970 4 194 1.2E-54 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS06255 a4f79e3298e1fd469a1378a86f62688f 351 Pfam PF02780 Transketolase, C-terminal domain 199 319 1.5E-22 T 11-11-2016 IPR033248 Transketolase, C-terminal domain S40542_RS06255 a4f79e3298e1fd469a1378a86f62688f 351 Pfam PF02779 Transketolase, pyrimidine binding domain 14 178 6.3E-29 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 SMART SM00448 5 117 2.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 Gene3D G3DSA:3.40.50.2300 2 128 2.0E-29 T 11-11-2016 S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 SMART SM00267 123 298 4.3E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 130 297 7.6E-38 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 292 6.0E-41 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 SUPERFAMILY SSF52172 3 128 1.21E-31 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 Pfam PF00072 Response regulator receiver domain 7 117 3.2E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 SUPERFAMILY SSF55073 139 294 9.22E-35 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS02510 edc4e2919aacc3f3c9e4cec8b927cb9f 300 Gene3D G3DSA:3.30.70.270 136 297 4.3E-39 T 11-11-2016 S40542_RS20800 944e456d429609313da56042393ccb2c 44 Pfam PF00468 Ribosomal protein L34 1 44 6.1E-26 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS20800 944e456d429609313da56042393ccb2c 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-11-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS20800 944e456d429609313da56042393ccb2c 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-14 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS20800 944e456d429609313da56042393ccb2c 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.524 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS20800 944e456d429609313da56042393ccb2c 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.0E-27 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS05460 dd05e3a9c2841c5852b1e0adaabbf6a7 418 Gene3D G3DSA:3.90.1150.10 286 417 2.5E-55 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS05460 dd05e3a9c2841c5852b1e0adaabbf6a7 418 Pfam PF00464 Serine hydroxymethyltransferase 9 387 1.6E-183 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 S40542_RS05460 dd05e3a9c2841c5852b1e0adaabbf6a7 418 Gene3D G3DSA:3.40.640.10 37 285 2.4E-107 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS05460 dd05e3a9c2841c5852b1e0adaabbf6a7 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 11-11-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 S40542_RS05460 dd05e3a9c2841c5852b1e0adaabbf6a7 418 PIRSF PIRSF000412 1 417 2.6E-169 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 S40542_RS05460 dd05e3a9c2841c5852b1e0adaabbf6a7 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 418 52.577 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 S40542_RS05460 dd05e3a9c2841c5852b1e0adaabbf6a7 418 SUPERFAMILY SSF53383 5 417 1.77E-182 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS09315 1c5435e75e73967c66f12d64c0ddb4b0 660 Pfam PF00672 HAMP domain 320 389 5.1E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS09315 1c5435e75e73967c66f12d64c0ddb4b0 660 SMART SM00304 339 393 3.3E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS09315 1c5435e75e73967c66f12d64c0ddb4b0 660 SMART SM00283 394 627 9.1E-65 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS09315 1c5435e75e73967c66f12d64c0ddb4b0 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 626 2.9E-39 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS09315 1c5435e75e73967c66f12d64c0ddb4b0 660 Gene3D G3DSA:1.10.287.950 402 599 1.7E-44 T 11-11-2016 S40542_RS09315 1c5435e75e73967c66f12d64c0ddb4b0 660 SUPERFAMILY SSF58104 361 628 4.32E-65 T 11-11-2016 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 56 78 - T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 Pfam PF00246 Zinc carboxypeptidase 14 266 1.9E-55 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 SUPERFAMILY SSF49265 298 394 2.01E-5 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 SUPERFAMILY SSF53187 4 291 8.6E-67 T 11-11-2016 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 Gene3D G3DSA:2.60.40.10 308 377 2.0E-10 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 Gene3D G3DSA:3.40.630.10 4 292 5.2E-70 T 11-11-2016 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 56 70 2.7E-9 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 135 143 2.7E-9 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 31 43 2.7E-9 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS19220 e307c602a928c0ad31faeb1a0c6404b8 861 SMART SM00631 5 261 1.0E-49 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS14080 c04d12d8bd10b6cf1b058d5ee6555697 1330 SUPERFAMILY SSF49299 51 140 2.55E-5 T 11-11-2016 IPR000601 PKD domain S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 PRINTS PR01438 Universal stress protein signature 257 269 1.3E-7 T 11-11-2016 IPR006015 Universal stress protein A S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 PRINTS PR01438 Universal stress protein signature 275 297 1.3E-7 T 11-11-2016 IPR006015 Universal stress protein A S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 PRINTS PR01438 Universal stress protein signature 4 22 1.3E-7 T 11-11-2016 IPR006015 Universal stress protein A S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 SUPERFAMILY SSF52402 163 304 6.87E-21 T 11-11-2016 S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 SUPERFAMILY SSF52402 4 155 1.67E-27 T 11-11-2016 S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 Pfam PF00582 Universal stress protein family 4 144 7.1E-18 T 11-11-2016 IPR006016 UspA GO:0006950 S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 Pfam PF00582 Universal stress protein family 187 297 1.8E-13 T 11-11-2016 IPR006016 UspA GO:0006950 S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 Gene3D G3DSA:3.40.50.620 2 137 4.9E-25 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS09165 4ef39257b15f6f6141f6e5b6043e8b07 307 Gene3D G3DSA:3.40.50.620 138 296 1.4E-22 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PIRSF PIRSF000350 1 446 2.9E-82 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 7.8E-69 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.3E-28 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.3E-28 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.3E-28 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.3E-28 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.3E-28 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 SUPERFAMILY SSF51905 1 367 8.24E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 SUPERFAMILY SSF55424 338 452 4.12E-35 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 Gene3D G3DSA:3.50.50.60 169 330 3.7E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 452 8.5E-210 T 11-11-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 451 2.7E-34 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 Gene3D G3DSA:3.50.50.60 3 165 9.2E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 Gene3D G3DSA:3.30.390.30 341 452 7.2E-43 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.3E-65 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.3E-65 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 8.3E-65 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 426 446 8.3E-65 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 8.3E-65 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 8.3E-65 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 8.3E-65 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 419 8.3E-65 T 11-11-2016 S40542_RS03795 a68315b44f584ed7f1f9ab2652768d2c 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 8.3E-65 T 11-11-2016 S40542_RS09075 98ce905cf14e1a9bbe2b78421b0ad38d 414 Pfam PF01618 MotA/TolQ/ExbB proton channel family 289 395 3.7E-26 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 S40542_RS18820 4eae855675668c5eee6f88df77f83e4a 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 126 2.0E-6 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS18820 4eae855675668c5eee6f88df77f83e4a 132 Gene3D G3DSA:3.10.180.10 2 130 9.8E-31 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS18820 4eae855675668c5eee6f88df77f83e4a 132 SUPERFAMILY SSF54593 2 130 1.48E-15 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS17915 f530d156b6aaa1cc68fa0b4008d8f759 228 SUPERFAMILY SSF46894 128 225 1.33E-25 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS17915 f530d156b6aaa1cc68fa0b4008d8f759 228 SMART SM00448 3 113 8.4E-43 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS17915 f530d156b6aaa1cc68fa0b4008d8f759 228 SMART SM00862 150 225 6.4E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS17915 f530d156b6aaa1cc68fa0b4008d8f759 228 Pfam PF00072 Response regulator receiver domain 5 114 5.6E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS17915 f530d156b6aaa1cc68fa0b4008d8f759 228 Gene3D G3DSA:1.10.10.10 129 225 3.3E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17915 f530d156b6aaa1cc68fa0b4008d8f759 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.8E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS17915 f530d156b6aaa1cc68fa0b4008d8f759 228 SUPERFAMILY SSF52172 2 129 2.28E-38 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS17915 f530d156b6aaa1cc68fa0b4008d8f759 228 Gene3D G3DSA:3.40.50.2300 2 127 5.6E-38 T 11-11-2016 S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 Hamap MF_00372 Imidazolonepropionase [hutI]. 5 406 41.914 T 11-11-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 Gene3D G3DSA:2.30.40.10 4 79 2.6E-11 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 SUPERFAMILY SSF51556 68 365 4.74E-83 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 Gene3D G3DSA:3.20.20.140 80 353 2.8E-39 T 11-11-2016 S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 TIGRFAM TIGR01224 hutI: imidazolonepropionase 27 400 1.1E-140 T 11-11-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 Pfam PF01979 Amidohydrolase family 66 405 2.8E-16 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 Gene3D G3DSA:2.30.40.10 354 388 6.4E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 SUPERFAMILY SSF51338 4 68 1.14E-25 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS01260 430766b42908dcd9352728e1cfc239a1 408 SUPERFAMILY SSF51338 368 405 1.14E-25 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 446 587 3.7E-9 T 11-11-2016 IPR000160 GGDEF domain S40542_RS12020 8759827133f84c0aa839c018a772360b 595 SMART SM00028 255 288 7.3 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 SMART SM00028 92 125 220.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 SMART SM00028 296 329 62.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 Gene3D G3DSA:1.25.40.10 54 163 3.6E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 SUPERFAMILY SSF48452 184 365 5.35E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 SUPERFAMILY SSF48452 52 166 7.86E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 Gene3D G3DSA:1.25.40.10 219 271 0.001 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 Gene3D G3DSA:3.30.70.270 446 594 3.4E-12 T 11-11-2016 S40542_RS12020 8759827133f84c0aa839c018a772360b 595 SUPERFAMILY SSF55073 451 594 8.63E-10 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS12020 8759827133f84c0aa839c018a772360b 595 SMART SM00267 434 595 5.8E-6 T 11-11-2016 IPR000160 GGDEF domain S40542_RS12020 8759827133f84c0aa839c018a772360b 595 Gene3D G3DSA:1.25.40.10 272 389 2.6E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS19270 a31dd8c106bb0ccd365b360393877677 399 Gene3D G3DSA:3.40.50.1950 3 182 1.1E-67 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 S40542_RS19270 a31dd8c106bb0ccd365b360393877677 399 Gene3D G3DSA:3.40.50.10300 184 398 3.1E-84 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 S40542_RS19270 a31dd8c106bb0ccd365b360393877677 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 394 7.3E-149 T 11-11-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 S40542_RS19270 a31dd8c106bb0ccd365b360393877677 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 370 2.5E-71 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 S40542_RS19270 a31dd8c106bb0ccd365b360393877677 399 SUPERFAMILY SSF102645 185 398 6.15E-77 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 S40542_RS19270 a31dd8c106bb0ccd365b360393877677 399 Pfam PF02441 Flavoprotein 6 134 1.2E-36 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 S40542_RS19270 a31dd8c106bb0ccd365b360393877677 399 SUPERFAMILY SSF52507 3 180 1.44E-62 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.411 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 Gene3D G3DSA:1.10.340.30 24 122 8.5E-34 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 Gene3D G3DSA:1.10.1670.10 123 208 1.4E-36 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.7E-6 T 11-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 SMART SM00525 186 206 2.3E-6 T 11-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 PIRSF PIRSF001435 1 211 9.0E-51 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 SUPERFAMILY SSF48150 3 208 1.27E-71 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 SMART SM00478 38 185 2.9E-54 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-11-2016 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 8.6E-18 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 7.1E-88 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 S40542_RS17400 507beb8b7d58bb4a6b503236dcbac441 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 S40542_RS15455 e86ccd22656896bf7edb95214828d48b 235 SMART SM00448 5 115 2.2E-41 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15455 e86ccd22656896bf7edb95214828d48b 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 1.2E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS15455 e86ccd22656896bf7edb95214828d48b 235 SUPERFAMILY SSF52172 5 123 1.27E-37 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15455 e86ccd22656896bf7edb95214828d48b 235 SMART SM00862 154 230 1.6E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS15455 e86ccd22656896bf7edb95214828d48b 235 Pfam PF00072 Response regulator receiver domain 7 116 9.8E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15455 e86ccd22656896bf7edb95214828d48b 235 Gene3D G3DSA:3.40.50.2300 6 131 2.7E-37 T 11-11-2016 S40542_RS15455 e86ccd22656896bf7edb95214828d48b 235 SUPERFAMILY SSF46894 130 231 7.65E-26 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS15455 e86ccd22656896bf7edb95214828d48b 235 Gene3D G3DSA:1.10.10.10 132 232 7.7E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS12340 7424d0a2d8aefbd3ef591267d45e11e5 447 SUPERFAMILY SSF48452 41 132 2.85E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12340 7424d0a2d8aefbd3ef591267d45e11e5 447 Gene3D G3DSA:1.25.40.10 29 133 5.5E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12340 7424d0a2d8aefbd3ef591267d45e11e5 447 Pfam PF04575 Protein of unknown function (DUF560) 165 438 2.3E-4 T 11-11-2016 IPR007655 Protein of unknown function DUF560 S40542_RS12340 7424d0a2d8aefbd3ef591267d45e11e5 447 Pfam PF13432 Tetratricopeptide repeat 77 123 1.1E-7 T 11-11-2016 S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 SMART SM00052 579 820 3.7E-81 T 11-11-2016 IPR001633 EAL domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 SMART SM00091 281 347 2.3E-4 T 11-11-2016 IPR000014 PAS domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 SUPERFAMILY SSF141868 586 827 1.12E-75 T 11-11-2016 IPR001633 EAL domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Gene3D G3DSA:3.20.20.450 582 826 1.3E-76 T 11-11-2016 IPR001633 EAL domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 SUPERFAMILY SSF55073 410 569 5.02E-44 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 SMART SM00267 394 567 1.9E-48 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Gene3D G3DSA:3.30.70.270 407 571 7.7E-48 T 11-11-2016 S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Pfam PF00990 Diguanylate cyclase, GGDEF domain 405 562 1.2E-40 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 SUPERFAMILY SSF52172 129 274 2.56E-8 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Pfam PF00072 Response regulator receiver domain 8 87 7.0E-6 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Pfam PF00563 EAL domain 587 815 4.7E-62 T 11-11-2016 IPR001633 EAL domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Gene3D G3DSA:3.30.450.20 284 403 5.5E-17 T 11-11-2016 S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Gene3D G3DSA:3.40.50.2300 3 88 7.4E-9 T 11-11-2016 S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Pfam PF08447 PAS fold 305 383 3.9E-8 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 Gene3D G3DSA:3.40.50.2300 134 275 6.9E-7 T 11-11-2016 S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 401 3.8E-11 T 11-11-2016 IPR000014 PAS domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 SUPERFAMILY SSF55785 294 402 5.58E-16 T 11-11-2016 IPR000014 PAS domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 401 565 6.9E-39 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18165 90a8441f5557b6e1791a29c75efbde3d 835 SUPERFAMILY SSF52172 4 87 8.4E-10 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 Gene3D G3DSA:3.40.1450.10 80 312 8.3E-96 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.944 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 SUPERFAMILY SSF53649 5 79 1.24E-75 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 SUPERFAMILY SSF53649 316 510 1.24E-75 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 1.3E-227 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 Gene3D G3DSA:3.40.720.10 316 511 1.1E-88 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 Gene3D G3DSA:3.40.720.10 5 79 1.1E-88 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 PIRSF PIRSF001492 1 514 1.3E-205 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 300 1.8E-81 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 SUPERFAMILY SSF64158 79 311 3.4E-84 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS03675 7712698ef3f2c9055d1597407f1a4649 514 Pfam PF01676 Metalloenzyme superfamily 6 500 3.7E-80 T 11-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 S40542_RS14445 bf04a379c5c51ff4d590c0b900bf7a10 213 SUPERFAMILY SSF56784 1 212 6.7E-56 T 11-11-2016 IPR023214 HAD-like domain S40542_RS14445 bf04a379c5c51ff4d590c0b900bf7a10 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 183 2.8E-36 T 11-11-2016 IPR023214 HAD-like domain S40542_RS14445 bf04a379c5c51ff4d590c0b900bf7a10 213 Gene3D G3DSA:3.40.50.1000 73 212 4.8E-41 T 11-11-2016 IPR023214 HAD-like domain S40542_RS14445 bf04a379c5c51ff4d590c0b900bf7a10 213 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 183 4.0E-9 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS14445 bf04a379c5c51ff4d590c0b900bf7a10 213 Gene3D G3DSA:1.10.150.240 21 72 1.2E-7 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 S40542_RS14445 bf04a379c5c51ff4d590c0b900bf7a10 213 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 177 1.0E-11 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS03010 39a26ce5c344ac7c81f5ebde7a7c57fb 303 SUPERFAMILY SSF53850 91 288 1.86E-31 T 11-11-2016 S40542_RS03010 39a26ce5c344ac7c81f5ebde7a7c57fb 303 SUPERFAMILY SSF46785 5 114 1.52E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03010 39a26ce5c344ac7c81f5ebde7a7c57fb 303 Pfam PF03466 LysR substrate binding domain 90 288 8.6E-30 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS03010 39a26ce5c344ac7c81f5ebde7a7c57fb 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.9E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03010 39a26ce5c344ac7c81f5ebde7a7c57fb 303 Gene3D G3DSA:3.40.190.10 92 175 7.6E-10 T 11-11-2016 S40542_RS03010 39a26ce5c344ac7c81f5ebde7a7c57fb 303 Gene3D G3DSA:1.10.10.10 3 82 7.4E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03010 39a26ce5c344ac7c81f5ebde7a7c57fb 303 Gene3D G3DSA:3.40.190.10 176 254 1.7E-11 T 11-11-2016 S40542_RS12735 732e01d9659862456f651d2f92292c00 437 SUPERFAMILY SSF55031 226 332 4.45E-27 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS12735 732e01d9659862456f651d2f92292c00 437 SUPERFAMILY SSF53187 341 433 1.05E-80 T 11-11-2016 S40542_RS12735 732e01d9659862456f651d2f92292c00 437 SUPERFAMILY SSF53187 31 239 1.05E-80 T 11-11-2016 S40542_RS12735 732e01d9659862456f651d2f92292c00 437 PIRSF PIRSF005962 27 436 4.3E-116 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 S40542_RS12735 732e01d9659862456f651d2f92292c00 437 Gene3D G3DSA:3.30.70.360 223 340 3.0E-34 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS12735 732e01d9659862456f651d2f92292c00 437 Gene3D G3DSA:3.40.630.10 341 434 1.0E-97 T 11-11-2016 S40542_RS12735 732e01d9659862456f651d2f92292c00 437 Gene3D G3DSA:3.40.630.10 31 220 1.0E-97 T 11-11-2016 S40542_RS12735 732e01d9659862456f651d2f92292c00 437 Pfam PF07687 Peptidase dimerisation domain 227 323 1.3E-11 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS12735 732e01d9659862456f651d2f92292c00 437 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 43 420 1.8E-103 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 S40542_RS12735 732e01d9659862456f651d2f92292c00 437 Pfam PF01546 Peptidase family M20/M25/M40 100 427 1.4E-33 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 S40542_RS06710 ed6fa2f552520ab0801269a5ffecacd3 298 Gene3D G3DSA:3.30.70.270 143 296 1.1E-49 T 11-11-2016 S40542_RS06710 ed6fa2f552520ab0801269a5ffecacd3 298 SUPERFAMILY SSF55073 146 296 3.77E-43 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS06710 ed6fa2f552520ab0801269a5ffecacd3 298 SMART SM00267 130 298 8.7E-51 T 11-11-2016 IPR000160 GGDEF domain S40542_RS06710 ed6fa2f552520ab0801269a5ffecacd3 298 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 295 2.0E-48 T 11-11-2016 IPR000160 GGDEF domain S40542_RS06710 ed6fa2f552520ab0801269a5ffecacd3 298 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 293 8.2E-45 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Gene3D G3DSA:3.30.450.20 509 550 1.2E-6 T 11-11-2016 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SMART SM00091 411 472 0.16 T 11-11-2016 IPR000014 PAS domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SMART SM00091 530 593 0.0028 T 11-11-2016 IPR000014 PAS domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Pfam PF00072 Response regulator receiver domain 1008 1118 1.0E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 PRINTS PR00344 Bacterial sensor protein C-terminal signature 823 833 1.3E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 858 1.3E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 877 1.3E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 PRINTS PR00344 Bacterial sensor protein C-terminal signature 805 819 1.3E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SUPERFAMILY SSF47384 637 718 1.96E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Pfam PF08448 PAS fold 417 519 4.6E-10 T 11-11-2016 IPR013656 PAS fold-4 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SMART SM00388 652 717 5.3E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SMART SM00387 764 880 1.5E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SMART SM00448 1005 1118 7.5E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Gene3D G3DSA:3.30.450.20 551 657 2.6E-9 T 11-11-2016 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SUPERFAMILY SSF52172 1007 1139 7.12E-31 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Gene3D G3DSA:3.40.50.2300 1002 1111 2.7E-31 T 11-11-2016 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 526 642 5.0E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 409 521 9.4E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Gene3D G3DSA:1.10.287.130 658 713 1.4E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Gene3D G3DSA:1.20.120.160 1112 1205 4.7E-10 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SUPERFAMILY SSF55785 515 637 9.07E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SUPERFAMILY SSF55874 706 876 5.63E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Gene3D G3DSA:3.30.450.20 404 508 1.3E-11 T 11-11-2016 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 764 878 8.5E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Pfam PF00512 His Kinase A (phospho-acceptor) domain 652 717 1.1E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SUPERFAMILY SSF47226 1125 1207 8.24E-11 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Gene3D G3DSA:3.30.565.10 718 882 2.3E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 SUPERFAMILY SSF55785 401 516 1.92E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS02505 eec37840be2b019d6e194626a4944623 1246 Pfam PF13426 PAS domain 540 637 0.0038 T 11-11-2016 IPR000014 PAS domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF55048 1358 1420 1.96E-5 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.47.10 970 1132 1.4E-61 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF52777 2445 2688 2.45E-36 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 870 886 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00698 Acyl transferase domain 1232 1514 2.2E-50 T 11-11-2016 IPR014043 Acyl transferase S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SMART SM00823 Phosphopantetheine attachment site 606 676 6.8E-8 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SMART SM00823 Phosphopantetheine attachment site 1610 1682 4.7E-4 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SMART SM00823 Phosphopantetheine attachment site 3231 3300 0.0016 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.50.980 171 329 2.2E-33 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.50.980 2875 3026 9.9E-39 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00501 AMP-binding enzyme 15 463 2.8E-79 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00501 AMP-binding enzyme 2723 3118 1.7E-85 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:2.30.38.10 3027 3108 7.1E-17 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1084 1173 1.2E-14 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.30.300.30 455 563 1.2E-11 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2742 3139 5.4E-117 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SMART SM01294 607 673 3.6E-6 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SMART SM01294 1611 1678 8.5E-4 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 965 1077 1.7E-44 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF52777 2271 2438 1.22E-22 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:2.30.38.10 374 449 2.0E-17 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF47336 3224 3296 7.2E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF53383 1830 2241 2.13E-87 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1636 1651 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.50.980 12 170 2.0E-33 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 ProSitePatterns PS00012 Phosphopantetheine attachment site. 632 647 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1234 1529 2.0E-81 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00202 Aminotransferase class-III 1860 2217 4.5E-52 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.366.10 1230 1353 1.1E-73 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.366.10 1421 1530 1.1E-73 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3255 3270 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.47.10 725 969 8.3E-87 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2865 2876 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF52151 1423 1525 3.92E-68 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF52151 1230 1359 3.92E-68 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:1.10.1200.10 3222 3296 4.3E-18 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00668 Condensation domain 2271 2564 1.2E-44 T 11-11-2016 IPR001242 Condensation domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.90.1150.10 2157 2242 2.0E-36 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.90.1150.10 1823 1897 2.0E-36 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 720 957 9.2E-73 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:1.10.1200.10 609 724 4.9E-18 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.50.980 2715 2874 2.0E-43 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF56801 2696 3243 1.18E-130 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF47336 607 734 4.84E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF56801 371 568 1.57E-98 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF56801 7 338 1.57E-98 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF47336 1605 1682 3.8E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.30.300.30 3113 3215 1.7E-27 T 11-11-2016 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF53901 717 1076 2.11E-87 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SUPERFAMILY SSF53901 1109 1128 2.11E-87 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 SMART SM00825 Beta-ketoacyl synthase 721 1134 1.7E-185 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00550 Phosphopantetheine attachment site 1611 1678 3.8E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00550 Phosphopantetheine attachment site 3235 3296 4.7E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Pfam PF00550 Phosphopantetheine attachment site 608 673 3.6E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:1.10.1200.10 1607 1681 7.3E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01780 524eae80f43e08af9a14a5d4e75b16d7 3339 Gene3D G3DSA:3.40.640.10 1899 2153 1.4E-62 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS20140 e5c6a5d0f3f0f2d66d1525afa274c491 276 SUPERFAMILY SSF54506 3 274 7.67E-58 T 11-11-2016 S40542_RS20140 e5c6a5d0f3f0f2d66d1525afa274c491 276 Gene3D G3DSA:3.10.310.10 123 264 2.4E-52 T 11-11-2016 S40542_RS20140 e5c6a5d0f3f0f2d66d1525afa274c491 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.569 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 S40542_RS20140 e5c6a5d0f3f0f2d66d1525afa274c491 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-11-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 S40542_RS20140 e5c6a5d0f3f0f2d66d1525afa274c491 276 Pfam PF01678 Diaminopimelate epimerase 154 268 2.4E-30 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 S40542_RS20140 e5c6a5d0f3f0f2d66d1525afa274c491 276 Pfam PF01678 Diaminopimelate epimerase 5 125 4.7E-35 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 S40542_RS20140 e5c6a5d0f3f0f2d66d1525afa274c491 276 Gene3D G3DSA:3.10.310.10 3 122 7.7E-51 T 11-11-2016 S40542_RS20140 e5c6a5d0f3f0f2d66d1525afa274c491 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.6E-97 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 4.6E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 4.6E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 SUPERFAMILY SSF51735 3 221 7.04E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 Gene3D G3DSA:3.40.50.720 2 221 1.2E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 Pfam PF00106 short chain dehydrogenase 3 182 2.2E-29 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.5E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 7.5E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 7.5E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS00680 645f7c404038d234cbfcb634491e80aa 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 7.5E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 524 2.1E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 SUPERFAMILY SSF58104 241 521 9.55E-68 T 11-11-2016 S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 SMART SM00283 260 521 2.8E-64 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 SUPERFAMILY SSF55785 23 116 6.11E-24 T 11-11-2016 IPR000014 PAS domain S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 Gene3D G3DSA:3.30.450.20 22 115 6.3E-20 T 11-11-2016 S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 SMART SM00086 81 123 0.0099 T 11-11-2016 IPR001610 PAC motif S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 Pfam PF08447 PAS fold 33 116 2.0E-16 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 Gene3D G3DSA:1.10.287.950 275 490 6.4E-55 T 11-11-2016 S40542_RS17430 f4918a9acb6ddbdcf4a0606255c5aa18 526 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 110 4.4E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 SUPERFAMILY SSF47384 134 214 2.55E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 Gene3D G3DSA:3.30.565.10 215 375 1.7E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 SMART SM00388 148 213 4.4E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 SUPERFAMILY SSF52172 391 506 1.99E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 SMART SM00086 93 135 4.5E-7 T 11-11-2016 IPR001610 PAC motif S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 Gene3D G3DSA:3.30.450.20 5 146 2.6E-20 T 11-11-2016 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 Pfam PF00512 His Kinase A (phospho-acceptor) domain 148 212 1.1E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 Pfam PF08447 PAS fold 43 128 6.8E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 SUPERFAMILY SSF55874 202 367 4.98E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 Gene3D G3DSA:3.40.50.2300 391 506 1.1E-34 T 11-11-2016 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 Gene3D G3DSA:1.10.287.130 147 209 3.9E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 SMART SM00448 390 504 2.9E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 SMART SM00387 260 369 1.5E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 261 368 1.7E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 Pfam PF00072 Response regulator receiver domain 392 504 7.4E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 SUPERFAMILY SSF55785 22 137 3.62E-16 T 11-11-2016 IPR000014 PAS domain S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 141 3.9E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 3.0E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 3.0E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 3.0E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00265 b0600acc14afbbd082eab0b2110e6990 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 366 3.0E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 321 2.8E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 305 2.8E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 SUPERFAMILY SSF46689 221 271 9.84E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 Gene3D G3DSA:1.10.10.60 220 275 2.6E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 Gene3D G3DSA:2.60.120.10 55 99 5.9E-4 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 Pfam PF12852 Cupin 24 206 3.8E-40 T 11-11-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 Pfam PF12833 Helix-turn-helix domain 245 323 2.2E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 Gene3D G3DSA:1.10.10.60 276 324 1.1E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 SMART SM00342 238 321 5.2E-29 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 SUPERFAMILY SSF46689 274 323 7.17E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09420 4a77badcd1d6ac6ec8b3c7e0f55645a6 325 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 275 317 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 667 43.304 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Gene3D G3DSA:3.40.50.300 388 408 1.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Gene3D G3DSA:3.40.50.300 6 89 1.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Gene3D G3DSA:3.40.50.300 278 338 1.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Pfam PF02151 UvrB/uvrC motif 633 667 1.2E-7 T 11-11-2016 IPR001943 UVR domain GO:0005515 S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 3.0E-22 T 11-11-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Pfam PF00271 Helicase conserved C-terminal domain 435 544 4.1E-19 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Pfam PF04851 Type III restriction enzyme, res subunit 12 97 1.4E-9 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 SMART SM00487 9 426 9.1E-26 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Gene3D G3DSA:3.40.50.300 419 582 3.3E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 SUPERFAMILY SSF52540 36 80 8.78E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 SUPERFAMILY SSF52540 470 593 8.78E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Gene3D G3DSA:4.10.860.10 629 669 1.2E-14 T 11-11-2016 IPR001943 UVR domain GO:0005515 S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 Gene3D G3DSA:3.30.2060.10 161 231 4.4E-12 T 11-11-2016 S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 SUPERFAMILY SSF52540 4 415 6.0E-137 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 SUPERFAMILY SSF46600 629 669 2.75E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 S40542_RS17335 5caf117eb313edb756aa0716e45d7c11 671 SMART SM00490 460 546 3.5E-20 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.761 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 SUPERFAMILY SSF54686 1 134 4.32E-56 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 3.4E-60 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 8.4E-49 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 Gene3D G3DSA:3.90.1170.10 23 134 1.9E-54 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 6.1E-40 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 6.1E-40 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 6.1E-40 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01210 f9df0259b98aeddc7ba7416de3701910 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 6.1E-40 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS16810 19a3d0ddead6984de465eb005b91c4aa 405 Gene3D G3DSA:3.90.1150.10 256 390 1.2E-52 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS16810 19a3d0ddead6984de465eb005b91c4aa 405 Gene3D G3DSA:3.40.640.10 5 255 2.1E-95 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS16810 19a3d0ddead6984de465eb005b91c4aa 405 SUPERFAMILY SSF53383 26 390 2.53E-119 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS16810 19a3d0ddead6984de465eb005b91c4aa 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS16810 19a3d0ddead6984de465eb005b91c4aa 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 389 1.2E-145 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS16810 19a3d0ddead6984de465eb005b91c4aa 405 PIRSF PIRSF001434 1 392 8.6E-147 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Gene3D G3DSA:3.30.565.10 633 792 5.3E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Pfam PF08447 PAS fold 320 408 2.5E-14 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SMART SM00086 505 547 1.4E-6 T 11-11-2016 IPR001610 PAC motif S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SMART SM00086 374 416 0.013 T 11-11-2016 IPR001610 PAC motif S40542_RS08240 278144fbc976e33359538af168c72e90 1106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 772 7.4E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 733 7.4E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 791 7.4E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 PRINTS PR00344 Bacterial sensor protein C-terminal signature 737 747 7.4E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SMART SM00091 431 499 2.8 T 11-11-2016 IPR000014 PAS domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SMART SM00091 297 364 0.07 T 11-11-2016 IPR000014 PAS domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Gene3D G3DSA:3.30.450.20 289 414 5.3E-24 T 11-11-2016 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SUPERFAMILY SSF55785 438 547 1.55E-21 T 11-11-2016 IPR000014 PAS domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 679 792 4.0E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Gene3D G3DSA:3.30.450.20 442 547 2.6E-30 T 11-11-2016 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SUPERFAMILY SSF52172 969 1101 1.57E-36 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SUPERFAMILY SSF55785 305 417 6.98E-19 T 11-11-2016 IPR000014 PAS domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SUPERFAMILY SSF55874 621 790 3.27E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SMART SM00388 567 632 1.6E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Gene3D G3DSA:1.10.287.130 560 628 8.3E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SMART SM00387 679 794 4.7E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 428 554 5.5E-14 T 11-11-2016 IPR000014 PAS domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 293 423 3.6E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SMART SM00448 810 930 4.4E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SMART SM00448 970 1091 1.2E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SUPERFAMILY SSF47384 553 633 1.16E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Gene3D G3DSA:3.40.50.2300 808 933 5.6E-28 T 11-11-2016 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 SUPERFAMILY SSF52172 809 933 1.25E-26 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Pfam PF00072 Response regulator receiver domain 813 930 8.9E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Pfam PF00072 Response regulator receiver domain 973 1091 1.8E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Pfam PF00512 His Kinase A (phospho-acceptor) domain 567 632 1.7E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Pfam PF13426 PAS domain 442 546 1.5E-19 T 11-11-2016 IPR000014 PAS domain S40542_RS08240 278144fbc976e33359538af168c72e90 1106 Gene3D G3DSA:3.40.50.2300 969 1101 5.2E-42 T 11-11-2016 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Gene3D G3DSA:3.40.50.620 212 262 4.4E-43 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Gene3D G3DSA:3.40.50.620 29 96 4.4E-43 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 SUPERFAMILY SSF50715 340 546 4.6E-70 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Gene3D G3DSA:2.40.240.10 462 545 1.8E-27 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 29 337 1.3E-121 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Gene3D G3DSA:3.90.800.10 101 209 7.5E-47 T 11-11-2016 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 4.6E-9 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 4.6E-9 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 4.6E-9 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 4.6E-9 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 547 51.893 T 11-11-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 SUPERFAMILY SSF52374 29 346 2.56E-102 T 11-11-2016 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 29 549 6.3E-273 T 11-11-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Gene3D G3DSA:1.10.1160.10 263 338 2.6E-38 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 3.9E-59 T 11-11-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS11805 ec9eb4bd562cfb4eb465841ddeb1a6d7 553 Gene3D G3DSA:2.40.240.10 348 461 2.3E-46 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS20060 26d58b987230718335fbfeeb26ad0eb5 460 Pfam PF03880 DbpA RNA binding domain 389 457 2.5E-20 T 11-11-2016 IPR005580 DbpA, RNA-binding domain S40542_RS20060 26d58b987230718335fbfeeb26ad0eb5 460 Pfam PF00271 Helicase conserved C-terminal domain 234 337 1.3E-25 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS20060 26d58b987230718335fbfeeb26ad0eb5 460 SUPERFAMILY SSF52540 72 354 5.52E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20060 26d58b987230718335fbfeeb26ad0eb5 460 Pfam PF00270 DEAD/DEAH box helicase 27 194 7.2E-50 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS20060 26d58b987230718335fbfeeb26ad0eb5 460 SMART SM00490 256 337 4.1E-27 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS20060 26d58b987230718335fbfeeb26ad0eb5 460 Gene3D G3DSA:3.40.50.300 5 217 2.8E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20060 26d58b987230718335fbfeeb26ad0eb5 460 SMART SM00487 22 219 9.3E-63 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS20060 26d58b987230718335fbfeeb26ad0eb5 460 Gene3D G3DSA:3.40.50.300 218 369 3.6E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 SUPERFAMILY SSF81886 878 890 7.98E-85 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 SUPERFAMILY SSF81886 620 840 7.98E-85 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 SMART SM00957 6 402 0.0 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Pfam PF07517 SecA DEAD-like domain 7 402 5.0E-134 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 SUPERFAMILY SSF52540 417 618 2.54E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Gene3D G3DSA:3.40.50.300 417 619 2.2E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 9.9E-39 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 11-11-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Gene3D G3DSA:3.40.50.300 2 228 8.9E-127 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Gene3D G3DSA:3.40.50.300 369 416 8.9E-127 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 PRINTS PR00906 SecA protein signature 376 393 2.2E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 PRINTS PR00906 SecA protein signature 117 127 2.2E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 PRINTS PR00906 SecA protein signature 63 87 2.2E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 PRINTS PR00906 SecA protein signature 101 115 2.2E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 PRINTS PR00906 SecA protein signature 170 190 2.2E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 PRINTS PR00906 SecA protein signature 413 426 2.2E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 PRINTS PR00906 SecA protein signature 339 361 2.2E-72 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Gene3D G3DSA:3.90.1440.10 230 368 5.8E-45 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 SMART SM00958 228 358 3.0E-79 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 SUPERFAMILY SSF81767 227 368 4.71E-43 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.883 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Pfam PF07516 SecA Wing and Scaffold domain 617 830 1.9E-70 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Gene3D G3DSA:1.10.3060.10 648 831 6.0E-60 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 Pfam PF02810 SEC-C motif 882 900 8.0E-10 T 11-11-2016 IPR004027 SEC-C motif S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 SUPERFAMILY SSF52540 368 415 9.75E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18700 1fad795068dfa7537483f87b3438d74a 902 SUPERFAMILY SSF52540 4 228 9.75E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18100 0c3e22252981525011964c898b57c15a 236 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 227 5.3E-47 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 S40542_RS18100 0c3e22252981525011964c898b57c15a 236 Pfam PF01479 S4 domain 6 51 4.3E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS18100 0c3e22252981525011964c898b57c15a 236 SUPERFAMILY SSF55174 6 60 2.06E-11 T 11-11-2016 S40542_RS18100 0c3e22252981525011964c898b57c15a 236 Pfam PF00849 RNA pseudouridylate synthase 65 195 5.0E-18 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS18100 0c3e22252981525011964c898b57c15a 236 SMART SM00363 5 66 2.1E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS18100 0c3e22252981525011964c898b57c15a 236 SUPERFAMILY SSF55120 64 230 1.6E-44 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS18100 0c3e22252981525011964c898b57c15a 236 Gene3D G3DSA:3.10.290.10 5 60 6.1E-17 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS18100 0c3e22252981525011964c898b57c15a 236 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 S40542_RS15340 fac90785795302efc5316c0e6215142c 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 6.7E-68 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS15340 fac90785795302efc5316c0e6215142c 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 11-11-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 S40542_RS15340 fac90785795302efc5316c0e6215142c 322 Gene3D G3DSA:3.40.50.1100 36 132 1.6E-37 T 11-11-2016 S40542_RS15340 fac90785795302efc5316c0e6215142c 322 Gene3D G3DSA:3.40.50.1100 133 313 1.0E-70 T 11-11-2016 S40542_RS15340 fac90785795302efc5316c0e6215142c 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 3.3E-130 T 11-11-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 S40542_RS15340 fac90785795302efc5316c0e6215142c 322 SUPERFAMILY SSF53686 4 314 5.11E-92 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS15340 fac90785795302efc5316c0e6215142c 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 311 2.3E-137 T 11-11-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 S40542_RS15475 1d86c588da6ed2b015177d8fad164843 261 Gene3D G3DSA:3.30.420.10 101 254 7.0E-33 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS15475 1d86c588da6ed2b015177d8fad164843 261 Pfam PF00665 Integrase core domain 103 217 3.6E-24 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 S40542_RS15475 1d86c588da6ed2b015177d8fad164843 261 SUPERFAMILY SSF53098 103 258 5.01E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 60 3.8E-17 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 267 2.2E-64 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 SUPERFAMILY SSF47757 2 74 5.36E-20 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 SMART SM00138 8 271 7.6E-110 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 Gene3D G3DSA:3.40.50.150 74 269 8.6E-68 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.9E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 PRINTS PR00996 Glutamate methyltransferase family signature 68 80 1.9E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 PRINTS PR00996 Glutamate methyltransferase family signature 210 224 1.9E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 1.9E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 1.9E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 SUPERFAMILY SSF53335 75 268 2.68E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 Gene3D G3DSA:1.10.155.10 2 73 6.4E-26 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS01975 997a3c4b2a2584a9db9806fa51161f0f 274 PIRSF PIRSF000410 1 272 3.4E-100 T 11-11-2016 IPR026024 Chemotaxis protein methyltransferase CheR S40542_RS03320 50bf8330385af060a26170e7c3a1bd5a 118 Gene3D G3DSA:3.30.160.100 1 93 9.2E-23 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 S40542_RS03320 50bf8330385af060a26170e7c3a1bd5a 118 SUPERFAMILY SSF69754 2 100 4.32E-25 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 S40542_RS03320 50bf8330385af060a26170e7c3a1bd5a 118 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 8.0E-18 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 S40542_RS03320 50bf8330385af060a26170e7c3a1bd5a 118 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.1E-16 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 1294 1455 5.36E-20 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 2494 2626 6.8E-16 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 975 993 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1491 1509 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 2858 3007 2.75E-18 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2523 2541 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 832 850 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2007 2025 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 1638 1778 1.24E-19 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 823 841 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2882 2900 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF06594 Haemolysin-type calcium binding protein related domain 2994 3045 1.0E-4 T 11-11-2016 IPR010566 Haemolysin-type calcium binding-related S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2900 2918 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 922 1109 3.92E-17 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 2135 2315 1.22E-17 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 1122 1279 3.66E-18 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 805 823 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 PRINTS PR00313 NodO calcium binding signature 845 853 6.6E-10 T 11-11-2016 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 PRINTS PR00313 NodO calcium binding signature 815 826 6.6E-10 T 11-11-2016 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 PRINTS PR00313 NodO calcium binding signature 836 844 6.6E-10 T 11-11-2016 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 PRINTS PR00313 NodO calcium binding signature 854 863 6.6E-10 T 11-11-2016 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1319 1337 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 1810 1971 4.71E-20 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 2325 2486 2.22E-18 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2351 2369 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1835 1853 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 836 857 2.6E-6 T 11-11-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 171 192 2.6E-6 T 11-11-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 841 859 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 814 832 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 782 926 2.22E-28 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:1.10.530.40 12 51 6.2E-8 T 11-11-2016 IPR023347 Lysozyme domain GO:0003796 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:1.10.530.40 130 242 6.2E-8 T 11-11-2016 IPR023347 Lysozyme domain GO:0003796 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 1466 1606 1.03E-19 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1147 1165 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2179 2197 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 1981 2146 1.2E-23 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 951 1112 2.6E-20 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 1293 1457 4.7E-24 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 2155 2318 3.4E-23 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 3227 3390 7.4E-18 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 3056 3217 1.8E-20 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 2325 2489 5.5E-23 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 2856 3016 1.2E-22 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 1639 1802 4.5E-23 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 782 944 4.5E-39 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 1467 1630 3.3E-23 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 2667 2825 9.8E-18 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 1123 1284 1.2E-21 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 1811 1973 2.3E-23 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Gene3D G3DSA:2.150.10.10 2498 2653 2.2E-21 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1663 1681 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 3225 3362 5.62E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 2666 2817 2.75E-15 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 1982 2122 9.16E-20 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 SUPERFAMILY SSF51120 3056 3192 1.16E-18 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1699 1714 18.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2906 2920 0.011 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3262 3276 1.2 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2935 2950 17.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1527 1542 18.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2043 2058 18.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1323 1339 0.56 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1151 1167 0.12 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1667 1683 0.49 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2385 2395 25.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1871 1886 18.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2684 2699 0.19 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2156 2169 3.5 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 791 807 1.1 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2886 2902 0.13 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1839 1855 0.49 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2513 2525 39.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2183 2199 0.12 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1183 1198 18.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 809 825 0.48 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1296 1309 3.5 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1984 1997 4.5 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2527 2543 0.12 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2868 2884 34.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 844 860 0.0075 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 826 843 0.0094 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2337 2353 0.75 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3087 3101 0.53 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3244 3260 11.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1495 1511 0.11 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3311 3322 21.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 979 995 0.21 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2355 2371 0.1 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2011 2027 0.12 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS10130 f8cae5eac260e777c9b3765cc2216d98 3476 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1355 1370 18.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS14180 415a3a387aa05bf179672483ab9c9d66 206 SUPERFAMILY SSF55821 1 203 1.95E-62 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain S40542_RS14180 415a3a387aa05bf179672483ab9c9d66 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.3E-66 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 S40542_RS14180 415a3a387aa05bf179672483ab9c9d66 206 Pfam PF01300 Telomere recombination 22 198 2.0E-45 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 S40542_RS14180 415a3a387aa05bf179672483ab9c9d66 206 Gene3D G3DSA:3.90.870.10 2 202 2.9E-61 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain S40542_RS05265 4794f0d71da04cbe31ee93d7f51470a7 62 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.5E-30 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 S40542_RS05265 4794f0d71da04cbe31ee93d7f51470a7 62 SUPERFAMILY SSF117130 1 54 4.05E-21 T 11-11-2016 S40542_RS05265 4794f0d71da04cbe31ee93d7f51470a7 62 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 S40542_RS05265 4794f0d71da04cbe31ee93d7f51470a7 62 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.483 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 S40542_RS05265 4794f0d71da04cbe31ee93d7f51470a7 62 Pfam PF02599 Global regulator protein family 1 52 1.3E-26 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 SUPERFAMILY SSF52016 162 387 3.92E-32 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 Pfam PF11791 Aconitate B N-terminal domain 6 156 3.4E-40 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 SUPERFAMILY SSF53732 395 907 8.63E-73 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 Gene3D G3DSA:3.30.499.10 424 550 1.8E-43 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 Pfam PF00330 Aconitase family (aconitate hydratase) 404 887 4.6E-57 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 SUPERFAMILY SSF74778 7 160 4.18E-39 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 399 3.3E-66 T 11-11-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 Gene3D G3DSA:3.30.499.10 728 908 7.8E-35 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 Gene3D G3DSA:3.20.19.10 163 377 5.1E-47 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel S40542_RS14295 3073aa028502fe6da18bbdf76c4d0890 929 Gene3D G3DSA:3.40.1060.10 551 711 2.7E-50 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS14430 29cc4816110a76900cd973374cc036e9 56 Pfam PF01783 Ribosomal L32p protein family 2 56 2.8E-19 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS14430 29cc4816110a76900cd973374cc036e9 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.2E-18 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS14430 29cc4816110a76900cd973374cc036e9 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.001 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS14430 29cc4816110a76900cd973374cc036e9 56 SUPERFAMILY SSF57829 2 55 9.16E-18 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 S40542_RS15805 2f757da24769065914fcd4092b1eaf8c 177 Pfam PF05239 PRC-barrel domain 98 171 2.5E-11 T 11-11-2016 IPR027275 PRC-barrel domain S40542_RS15805 2f757da24769065914fcd4092b1eaf8c 177 Gene3D G3DSA:2.30.30.240 101 176 1.4E-27 T 11-11-2016 S40542_RS15805 2f757da24769065914fcd4092b1eaf8c 177 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 8 177 24.478 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 S40542_RS15805 2f757da24769065914fcd4092b1eaf8c 177 SUPERFAMILY SSF50447 9 95 3.0E-25 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS15805 2f757da24769065914fcd4092b1eaf8c 177 Pfam PF01782 RimM N-terminal domain 10 91 7.5E-27 T 11-11-2016 IPR002676 RimM protein GO:0006364 S40542_RS15805 2f757da24769065914fcd4092b1eaf8c 177 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 9 176 2.5E-56 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 S40542_RS15805 2f757da24769065914fcd4092b1eaf8c 177 Gene3D G3DSA:2.40.30.60 3 95 1.6E-32 T 11-11-2016 IPR002676 RimM protein GO:0006364 S40542_RS15805 2f757da24769065914fcd4092b1eaf8c 177 SUPERFAMILY SSF50346 101 175 1.28E-18 T 11-11-2016 IPR011033 PRC-barrel-like S40542_RS02400 37fa869a51dc4a4afd00848837efba2a 254 Pfam PF01026 TatD related DNase 4 253 8.8E-56 T 11-11-2016 IPR001130 TatD family GO:0016788 S40542_RS02400 37fa869a51dc4a4afd00848837efba2a 254 Gene3D G3DSA:3.20.20.140 1 254 3.0E-70 T 11-11-2016 S40542_RS02400 37fa869a51dc4a4afd00848837efba2a 254 PIRSF PIRSF005902 1 254 3.3E-63 T 11-11-2016 IPR001130 TatD family GO:0016788 S40542_RS02400 37fa869a51dc4a4afd00848837efba2a 254 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 S40542_RS02400 37fa869a51dc4a4afd00848837efba2a 254 SUPERFAMILY SSF51556 3 254 1.49E-69 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 Gene3D G3DSA:2.60.40.670 415 497 3.0E-17 T 11-11-2016 IPR000601 PKD domain S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 SUPERFAMILY SSF50494 193 400 2.33E-26 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 SMART SM00089 417 497 3.0E-16 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 SUPERFAMILY SSF49299 414 497 3.92E-17 T 11-11-2016 IPR000601 PKD domain S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 521 582 2.1E-11 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 Gene3D G3DSA:2.40.10.10 287 388 2.9E-12 T 11-11-2016 S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 Pfam PF00801 PKD domain 433 486 1.9E-8 T 11-11-2016 IPR000601 PKD domain S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 Gene3D G3DSA:2.40.10.10 210 286 1.3E-6 T 11-11-2016 S40542_RS00375 8af9f44c53538179c0fa627883836f2e 603 Pfam PF13365 Trypsin-like peptidase domain 217 377 5.8E-12 T 11-11-2016 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 Gene3D G3DSA:1.10.285.10 373 446 2.3E-25 T 11-11-2016 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 Gene3D G3DSA:1.10.285.10 8 67 4.1E-22 T 11-11-2016 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 Gene3D G3DSA:3.40.192.10 68 189 1.1E-59 T 11-11-2016 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 4.4E-29 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 4.4E-29 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 4.4E-29 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 4.4E-29 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 PIRSF PIRSF000185 22 447 1.2E-113 T 11-11-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 SUPERFAMILY SSF53223 7 196 7.04E-70 T 11-11-2016 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 Gene3D G3DSA:3.40.50.720 209 372 3.4E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 185 6.0E-50 T 11-11-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 6.2E-81 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 SUPERFAMILY SSF51735 202 446 2.19E-73 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09745 fca4acd6fd53d371d240a257c18c2c58 447 SMART SM00839 204 445 4.2E-80 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS07855 a1db49aedf285b1147788ccf3e4b6af2 449 Pfam PF06123 Inner membrane protein CreD 9 427 3.3E-137 T 11-11-2016 IPR010364 Uncharacterised protein family, inner membrane CreD S40542_RS07855 a1db49aedf285b1147788ccf3e4b6af2 449 PIRSF PIRSF004548 2 444 5.4E-137 T 11-11-2016 IPR010364 Uncharacterised protein family, inner membrane CreD S40542_RS18765 92019e057565791e95e8c45ee6882114 487 SUPERFAMILY SSF53244 330 482 1.27E-46 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 413 1.8E-20 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 482 32.52 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 Gene3D G3DSA:3.40.1190.10 97 333 1.1E-73 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 SUPERFAMILY SSF63418 4 95 5.23E-21 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 Pfam PF08245 Mur ligase middle domain 106 309 9.0E-49 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 Gene3D G3DSA:3.40.1390.10 6 95 3.9E-24 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 Gene3D G3DSA:3.90.190.20 334 475 6.7E-53 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 SUPERFAMILY SSF53623 97 327 1.44E-71 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 Pfam PF01225 Mur ligase family, catalytic domain 21 94 2.3E-12 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 S40542_RS18765 92019e057565791e95e8c45ee6882114 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 482 3.6E-158 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 SUPERFAMILY SSF53633 5 254 5.24E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 Gene3D G3DSA:3.40.1160.10 3 254 3.2E-53 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 PIRSF PIRSF000729 1 368 2.7E-129 T 11-11-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 Gene3D G3DSA:2.30.130.10 274 365 4.3E-23 T 11-11-2016 IPR015947 PUA-like domain S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 11-11-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 257 35.5 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 Pfam PF00696 Amino acid kinase family 5 233 2.0E-40 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 SMART SM00359 276 359 4.1E-18 T 11-11-2016 IPR002478 PUA domain GO:0003723 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 Pfam PF01472 PUA domain 277 348 3.4E-21 T 11-11-2016 IPR002478 PUA domain GO:0003723 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 5.2E-55 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 5.2E-55 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 5.2E-55 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 5.2E-55 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 5.2E-55 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 SUPERFAMILY SSF88697 276 366 1.1E-21 T 11-11-2016 IPR015947 PUA-like domain S40542_RS18425 5695f52398feb4d9b748e2af0b86e7e2 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 365 4.9E-136 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 S40542_RS04940 de04adecdf26569d96916b4e48e34f6d 112 SUPERFAMILY SSF89360 6 101 3.53E-30 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS04940 de04adecdf26569d96916b4e48e34f6d 112 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 112 35.585 T 11-11-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 S40542_RS04940 de04adecdf26569d96916b4e48e34f6d 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 7 107 6.4E-19 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS04940 de04adecdf26569d96916b4e48e34f6d 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 93 110 - T 11-11-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site S40542_RS04940 de04adecdf26569d96916b4e48e34f6d 112 Gene3D G3DSA:2.60.300.12 2 98 8.1E-31 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS04940 de04adecdf26569d96916b4e48e34f6d 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 112 6.4E-37 T 11-11-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 S40542_RS17665 fa5a3652081609bc450d21ce486f3762 280 Gene3D G3DSA:1.10.8.10 7 88 1.2E-29 T 11-11-2016 S40542_RS17665 fa5a3652081609bc450d21ce486f3762 280 SUPERFAMILY SSF53335 8 277 1.94E-61 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS17665 fa5a3652081609bc450d21ce486f3762 280 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 277 1.0E-86 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 S40542_RS17665 fa5a3652081609bc450d21ce486f3762 280 Gene3D G3DSA:3.40.50.150 90 278 4.7E-69 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS17665 fa5a3652081609bc450d21ce486f3762 280 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 6 279 44.114 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 S40542_RS17665 fa5a3652081609bc450d21ce486f3762 280 Pfam PF13847 Methyltransferase domain 115 243 1.1E-20 T 11-11-2016 IPR025714 Methyltransferase domain S40542_RS17665 fa5a3652081609bc450d21ce486f3762 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 184 190 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS17665 fa5a3652081609bc450d21ce486f3762 280 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 275 7.1E-93 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 S40542_RS05630 e828b829032d3880c33c391a4fbe3f20 368 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 11-11-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 S40542_RS05630 e828b829032d3880c33c391a4fbe3f20 368 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 363 7.6E-132 T 11-11-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 S40542_RS05630 e828b829032d3880c33c391a4fbe3f20 368 Pfam PF01098 Cell cycle protein 23 364 4.4E-108 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 S40542_RS01170 9fa47de660d230454441bf671a750e29 103 Gene3D G3DSA:3.30.70.600 3 102 1.5E-43 T 11-11-2016 IPR027486 Ribosomal protein S10 domain S40542_RS01170 9fa47de660d230454441bf671a750e29 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-11-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01170 9fa47de660d230454441bf671a750e29 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.2E-46 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01170 9fa47de660d230454441bf671a750e29 103 SMART SM01403 7 101 7.6E-57 T 11-11-2016 IPR027486 Ribosomal protein S10 domain S40542_RS01170 9fa47de660d230454441bf671a750e29 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.165 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01170 9fa47de660d230454441bf671a750e29 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.1E-18 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01170 9fa47de660d230454441bf671a750e29 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.1E-18 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01170 9fa47de660d230454441bf671a750e29 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.1E-18 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01170 9fa47de660d230454441bf671a750e29 103 SUPERFAMILY SSF54999 5 101 6.28E-37 T 11-11-2016 IPR027486 Ribosomal protein S10 domain S40542_RS01170 9fa47de660d230454441bf671a750e29 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 5.5E-35 T 11-11-2016 IPR027486 Ribosomal protein S10 domain S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 PRINTS PR00147 DNA photolyase signature 333 351 2.0E-6 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 PRINTS PR00147 DNA photolyase signature 313 329 2.0E-6 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 SUPERFAMILY SSF52425 3 192 1.31E-38 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 Pfam PF03441 FAD binding domain of DNA photolyase 261 460 4.6E-55 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 Pfam PF00875 DNA photolyase 4 128 1.7E-20 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 Gene3D G3DSA:1.10.579.10 268 462 2.7E-53 T 11-11-2016 S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 SUPERFAMILY SSF48173 188 465 3.14E-83 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 313 325 - T 11-11-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 Gene3D G3DSA:3.40.50.620 2 145 7.0E-34 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS09525 b73d52cd889aa040d5783bf8e4741365 482 Gene3D G3DSA:1.25.40.80 153 267 1.1E-17 T 11-11-2016 S40542_RS12830 c48674aa96d9e267a7e443689ff7af12 332 SUPERFAMILY SSF53448 13 191 1.34E-34 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS12830 c48674aa96d9e267a7e443689ff7af12 332 Pfam PF00535 Glycosyl transferase family 2 17 181 2.0E-28 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 S40542_RS12830 c48674aa96d9e267a7e443689ff7af12 332 Gene3D G3DSA:3.90.550.10 15 190 1.6E-23 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18395 97db10f5c38b0aaba8aeec79e3414967 287 Gene3D G3DSA:3.40.190.10 176 254 2.1E-17 T 11-11-2016 S40542_RS18395 97db10f5c38b0aaba8aeec79e3414967 287 Gene3D G3DSA:1.10.10.10 3 84 4.4E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18395 97db10f5c38b0aaba8aeec79e3414967 287 Gene3D G3DSA:3.40.190.10 91 175 4.7E-22 T 11-11-2016 S40542_RS18395 97db10f5c38b0aaba8aeec79e3414967 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 6.1E-21 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS18395 97db10f5c38b0aaba8aeec79e3414967 287 SUPERFAMILY SSF53850 88 283 2.71E-40 T 11-11-2016 S40542_RS18395 97db10f5c38b0aaba8aeec79e3414967 287 Pfam PF03466 LysR substrate binding domain 87 283 3.4E-39 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS18395 97db10f5c38b0aaba8aeec79e3414967 287 SUPERFAMILY SSF46785 3 85 6.01E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03975 6b3bb7120ecf5196c0bafc2f71f9e28c 383 Gene3D G3DSA:2.70.70.10 200 340 5.5E-15 T 11-11-2016 S40542_RS03975 6b3bb7120ecf5196c0bafc2f71f9e28c 383 Pfam PF01551 Peptidase family M23 257 340 1.7E-10 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS03975 6b3bb7120ecf5196c0bafc2f71f9e28c 383 SUPERFAMILY SSF51261 190 339 1.31E-15 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS03975 6b3bb7120ecf5196c0bafc2f71f9e28c 383 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 317 337 4.6E-43 T 11-11-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 S40542_RS03975 6b3bb7120ecf5196c0bafc2f71f9e28c 383 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 265 283 4.6E-43 T 11-11-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 S40542_RS03975 6b3bb7120ecf5196c0bafc2f71f9e28c 383 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 238 256 4.6E-43 T 11-11-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 S40542_RS03975 6b3bb7120ecf5196c0bafc2f71f9e28c 383 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 216 237 4.6E-43 T 11-11-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 S40542_RS03975 6b3bb7120ecf5196c0bafc2f71f9e28c 383 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 344 367 4.6E-43 T 11-11-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 S40542_RS09875 50ff21d2fe50018966a13281e93fd6e9 150 SUPERFAMILY SSF50475 1 89 3.75E-16 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS09875 50ff21d2fe50018966a13281e93fd6e9 150 Gene3D G3DSA:2.30.110.10 1 120 3.2E-26 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS09875 50ff21d2fe50018966a13281e93fd6e9 150 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 86 4.9E-13 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS00565 71b94d14dbedcfd12e99aa2ce17f6f26 256 SUPERFAMILY SSF56317 1 245 1.7E-52 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS00565 71b94d14dbedcfd12e99aa2ce17f6f26 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 136 156 - T 11-11-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site S40542_RS00565 71b94d14dbedcfd12e99aa2ce17f6f26 256 Gene3D G3DSA:3.60.110.10 1 253 3.6E-53 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS00565 71b94d14dbedcfd12e99aa2ce17f6f26 256 Pfam PF00795 Carbon-nitrogen hydrolase 7 238 6.1E-33 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS09800 39bc6faf08a5b5c4f7d05cea7421b39c 245 SUPERFAMILY SSF56317 1 231 7.19E-37 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS09800 39bc6faf08a5b5c4f7d05cea7421b39c 245 Gene3D G3DSA:3.60.110.10 1 230 1.3E-31 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS09800 39bc6faf08a5b5c4f7d05cea7421b39c 245 Pfam PF00795 Carbon-nitrogen hydrolase 2 230 4.3E-14 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS12750 66f268855279d03526a4a056df22e85c 382 Gene3D G3DSA:1.25.40.10 198 362 1.5E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12750 66f268855279d03526a4a056df22e85c 382 SUPERFAMILY SSF48452 212 367 1.96E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12750 66f268855279d03526a4a056df22e85c 382 SMART SM00028 198 231 32.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS12750 66f268855279d03526a4a056df22e85c 382 SMART SM00028 333 366 9.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS03615 3b738240e2443e9d96d411bed495bbd5 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.167 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 S40542_RS03615 3b738240e2443e9d96d411bed495bbd5 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 64 1.4E-9 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS03615 3b738240e2443e9d96d411bed495bbd5 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.8E-101 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 S40542_RS03615 3b738240e2443e9d96d411bed495bbd5 282 Gene3D G3DSA:3.30.1300.10 181 280 9.3E-31 T 11-11-2016 S40542_RS03615 3b738240e2443e9d96d411bed495bbd5 282 SUPERFAMILY SSF52374 1 280 4.69E-106 T 11-11-2016 S40542_RS03615 3b738240e2443e9d96d411bed495bbd5 282 Pfam PF02569 Pantoate-beta-alanine ligase 4 278 3.6E-102 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 S40542_RS03615 3b738240e2443e9d96d411bed495bbd5 282 Gene3D G3DSA:3.40.50.620 1 176 6.2E-76 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 Pfam PF00579 tRNA synthetases class I (W and Y) 3 284 8.8E-49 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 Gene3D G3DSA:1.10.240.10 205 296 1.2E-29 T 11-11-2016 S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 SUPERFAMILY SSF52374 2 329 1.02E-72 T 11-11-2016 S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 329 8.2E-63 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 Gene3D G3DSA:3.40.50.620 2 204 7.5E-65 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.3E-22 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 2.3E-22 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 2.3E-22 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS18810 0575f1f924e09a24ec89f85144ee19ff 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 196 206 2.3E-22 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 SMART SM00267 803 991 1.4E-21 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 Gene3D G3DSA:2.120.10.30 37 136 5.6E-11 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 Gene3D G3DSA:2.120.10.30 227 271 5.6E-11 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 Pfam PF07495 Y_Y_Y domain 682 741 9.6E-14 T 11-11-2016 IPR011123 Two component regulator three Y S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 SUPERFAMILY SSF55073 819 983 6.28E-28 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 Gene3D G3DSA:3.30.70.270 816 984 4.7E-32 T 11-11-2016 S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 812 982 1.5E-24 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 Pfam PF00990 Diguanylate cyclase, GGDEF domain 815 982 3.9E-27 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 Gene3D G3DSA:2.130.10.140 542 564 2.1E-4 T 11-11-2016 S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 Gene3D G3DSA:2.130.10.140 272 464 2.1E-4 T 11-11-2016 S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 SUPERFAMILY SSF63829 40 186 4.25E-10 T 11-11-2016 S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 SUPERFAMILY SSF63829 234 337 4.25E-10 T 11-11-2016 S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 Pfam PF07494 Two component regulator propeller 33 54 0.0016 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 SUPERFAMILY SSF63829 339 463 2.32E-9 T 11-11-2016 S40542_RS05505 8a54f861f572c6ec5153c9226bab1704 1025 SUPERFAMILY SSF63829 499 566 2.32E-9 T 11-11-2016 S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 Pfam PF09423 PhoD-like phosphatase 148 405 2.6E-16 T 11-11-2016 IPR018946 Alkaline phosphatase D-related S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 Gene3D G3DSA:3.60.21.10 532 557 8.8E-17 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 Gene3D G3DSA:3.60.21.10 158 339 8.8E-17 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 Gene3D G3DSA:3.60.21.10 373 449 8.8E-17 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 SUPERFAMILY SSF56300 364 413 1.46E-20 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 SUPERFAMILY SSF56300 143 330 1.46E-20 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 Gene3D G3DSA:2.10.10.10 452 507 9.9E-11 T 11-11-2016 IPR000562 Fibronectin, type II, collagen-binding S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 Gene3D G3DSA:2.10.10.10 79 121 4.9E-5 T 11-11-2016 IPR000562 Fibronectin, type II, collagen-binding S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 Pfam PF00040 Fibronectin type II domain 462 504 1.0E-9 T 11-11-2016 IPR000562 Fibronectin, type II, collagen-binding S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 SMART SM00059 454 504 0.0016 T 11-11-2016 IPR000562 Fibronectin, type II, collagen-binding S40542_RS16305 c96f43d052cc88b0a360b2295f3777b8 571 SUPERFAMILY SSF57440 461 506 2.36E-8 T 11-11-2016 IPR013806 Kringle-like fold S40542_RS12345 5e93c19280cad2dae376db6a8de1e046 445 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 444 56.11 T 11-11-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 S40542_RS12345 5e93c19280cad2dae376db6a8de1e046 445 Pfam PF04996 Succinylarginine dihydrolase 4 443 1.4E-209 T 11-11-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 S40542_RS12345 5e93c19280cad2dae376db6a8de1e046 445 SUPERFAMILY SSF55909 3 443 2.45E-196 T 11-11-2016 S40542_RS12345 5e93c19280cad2dae376db6a8de1e046 445 Gene3D G3DSA:3.75.10.20 1 443 5.6E-210 T 11-11-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 S40542_RS12345 5e93c19280cad2dae376db6a8de1e046 445 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 443 1.1E-199 T 11-11-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 SMART SM00226 8 154 1.7E-38 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 10 150 3.1E-35 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 Gene3D G3DSA:3.40.50.270 5 155 1.8E-47 T 11-11-2016 S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 SUPERFAMILY SSF52788 7 155 6.02E-45 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 51 67 1.2E-22 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 85 100 1.2E-22 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 108 121 1.2E-22 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 10 27 1.2E-22 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS08145 f18d2908af09ea566a3dbf9d17337462 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 126 141 1.2E-22 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 Gene3D G3DSA:3.40.50.300 154 326 1.2E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 Gene3D G3DSA:3.40.50.2300 4 140 2.1E-28 T 11-11-2016 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 Gene3D G3DSA:1.10.8.60 328 395 2.9E-17 T 11-11-2016 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 Gene3D G3DSA:1.10.10.60 396 442 4.3E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 Pfam PF00158 Sigma-54 interaction domain 157 321 3.5E-62 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 SUPERFAMILY SSF46689 360 442 4.12E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 Pfam PF02954 Bacterial regulatory protein, Fis family 408 440 2.5E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 SMART SM00382 175 317 6.6E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 Pfam PF00072 Response regulator receiver domain 5 119 4.0E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 423 443 6.1E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 406 423 6.1E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 241 256 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 SUPERFAMILY SSF52172 4 198 7.26E-31 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 SMART SM00448 3 119 1.8E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS15240 43865d0ece8cff7a4fc57b45533c0dc3 445 SUPERFAMILY SSF52540 155 388 6.48E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 Gene3D G3DSA:3.90.110.10 147 310 5.9E-63 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 Gene3D G3DSA:3.40.50.720 1 146 3.7E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 2.5E-127 T 11-11-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 11-11-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 PIRSF PIRSF000102 1 309 1.3E-61 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 SUPERFAMILY SSF51735 1 145 3.58E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 SUPERFAMILY SSF56327 146 310 8.8E-45 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 52.371 T 11-11-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.5E-45 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 S40542_RS04865 1f63bd4dd5a51d8573b792e3b434eaa3 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.3E-49 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 S40542_RS18560 05ef4ecbd41f558298b8e319db01e62f 384 SUPERFAMILY SSF53383 8 383 8.87E-106 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS18560 05ef4ecbd41f558298b8e319db01e62f 384 Gene3D G3DSA:3.90.1150.10 263 384 2.1E-34 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS18560 05ef4ecbd41f558298b8e319db01e62f 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 381 1.4E-108 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase S40542_RS18560 05ef4ecbd41f558298b8e319db01e62f 384 Gene3D G3DSA:3.40.640.10 12 260 3.2E-77 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS18560 05ef4ecbd41f558298b8e319db01e62f 384 PIRSF PIRSF000390 1 384 4.3E-99 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase S40542_RS05225 6d4269d38156f46d99b01b3b0b04fa24 508 SUPERFAMILY SSF55785 211 333 1.14E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS05225 6d4269d38156f46d99b01b3b0b04fa24 508 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 342 504 4.9E-42 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05225 6d4269d38156f46d99b01b3b0b04fa24 508 SUPERFAMILY SSF55073 351 507 1.1E-41 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS05225 6d4269d38156f46d99b01b3b0b04fa24 508 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 502 8.3E-39 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05225 6d4269d38156f46d99b01b3b0b04fa24 508 Gene3D G3DSA:3.30.70.270 348 507 9.4E-46 T 11-11-2016 S40542_RS05225 6d4269d38156f46d99b01b3b0b04fa24 508 SMART SM00267 335 506 5.4E-49 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05225 6d4269d38156f46d99b01b3b0b04fa24 508 Gene3D G3DSA:3.30.450.20 217 333 4.3E-6 T 11-11-2016 S40542_RS13815 8113d2972c4eee68c8a089ca7e3e8ffc 299 Pfam PF05726 Pirin C-terminal cupin domain 180 275 6.8E-16 T 11-11-2016 IPR008778 Pirin, C-terminal domain S40542_RS13815 8113d2972c4eee68c8a089ca7e3e8ffc 299 Gene3D G3DSA:2.60.120.10 11 244 3.3E-64 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS13815 8113d2972c4eee68c8a089ca7e3e8ffc 299 Pfam PF02678 Pirin 22 125 1.7E-33 T 11-11-2016 IPR003829 Pirin, N-terminal domain S40542_RS13815 8113d2972c4eee68c8a089ca7e3e8ffc 299 SUPERFAMILY SSF51182 6 287 1.62E-74 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS13815 8113d2972c4eee68c8a089ca7e3e8ffc 299 PIRSF PIRSF006232 3 284 5.1E-80 T 11-11-2016 IPR012093 Pirin S40542_RS10185 82728eaefbdad4874d76223968e64feb 556 Gene3D G3DSA:3.60.20.10 2 190 6.9E-67 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS10185 82728eaefbdad4874d76223968e64feb 556 SUPERFAMILY SSF52402 211 483 8.9E-74 T 11-11-2016 S40542_RS10185 82728eaefbdad4874d76223968e64feb 556 SUPERFAMILY SSF56235 1 196 3.52E-55 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS10185 82728eaefbdad4874d76223968e64feb 556 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.5E-39 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain S40542_RS10185 82728eaefbdad4874d76223968e64feb 556 Pfam PF00733 Asparagine synthase 212 511 3.6E-93 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 S40542_RS10185 82728eaefbdad4874d76223968e64feb 556 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 2.0E-117 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 S40542_RS10185 82728eaefbdad4874d76223968e64feb 556 Gene3D G3DSA:3.40.50.620 191 511 7.9E-114 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.4E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 SUPERFAMILY SSF46785 1 81 1.11E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 Pfam PF03466 LysR substrate binding domain 88 262 1.8E-8 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 SUPERFAMILY SSF53850 91 262 2.53E-11 T 11-11-2016 S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 Gene3D G3DSA:3.40.190.10 91 170 1.0E-7 T 11-11-2016 S40542_RS10760 0f286eac504b1ec025256fa66b16c407 280 Gene3D G3DSA:1.10.10.10 1 82 3.2E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02235 c1660e3ddbd93a95c5e6416a83d2433e 165 Pfam PF11736 Protein of unknown function (DUF3299) 31 163 4.5E-46 T 11-11-2016 IPR021727 Protein of unknown function DUF3299 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 Gene3D G3DSA:3.10.350.10 442 485 1.4E-9 T 11-11-2016 IPR018392 LysM domain S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 Gene3D G3DSA:3.10.350.10 490 534 2.4E-8 T 11-11-2016 IPR018392 LysM domain S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 244 1.2E-57 T 11-11-2016 IPR013360 Pilus biogenesis/stability type IV, PilW S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 Pfam PF13424 Tetratricopeptide repeat 110 174 2.0E-8 T 11-11-2016 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SUPERFAMILY SSF48452 145 249 6.33E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SMART SM00028 75 108 1.5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SMART SM00028 145 178 3.9E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SMART SM00028 109 142 74.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SMART SM00028 41 74 9.9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 Pfam PF13432 Tetratricopeptide repeat 46 94 0.017 T 11-11-2016 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SMART SM00257 442 486 2.6E-8 T 11-11-2016 IPR018392 LysM domain S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SMART SM00257 491 535 3.9E-4 T 11-11-2016 IPR018392 LysM domain S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SUPERFAMILY SSF54106 490 534 2.09E-6 T 11-11-2016 IPR018392 LysM domain S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 Gene3D G3DSA:1.25.40.10 36 256 3.4E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SUPERFAMILY SSF48452 38 174 7.3E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 Pfam PF01476 LysM domain 443 483 7.0E-6 T 11-11-2016 IPR018392 LysM domain S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 Pfam PF01476 LysM domain 492 534 1.8E-5 T 11-11-2016 IPR018392 LysM domain S40542_RS03995 5f5a447fb35af168cdb14ccff7f9b5c8 542 SUPERFAMILY SSF54106 442 485 1.57E-7 T 11-11-2016 IPR018392 LysM domain S40542_RS13525 8f694840cffcbed7843a5b013ae10309 94 SUPERFAMILY SSF54909 1 84 8.58E-17 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS13525 8f694840cffcbed7843a5b013ae10309 94 Gene3D G3DSA:3.30.70.1060 3 82 8.0E-8 T 11-11-2016 S40542_RS13525 8f694840cffcbed7843a5b013ae10309 94 Pfam PF03795 YCII-related domain 7 81 2.1E-8 T 11-11-2016 IPR005545 YCII-related S40542_RS09010 8a25f550070489010bcf58d8c9985b6b 303 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 13 291 8.3E-31 T 11-11-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 S40542_RS09010 8a25f550070489010bcf58d8c9985b6b 303 SUPERFAMILY SSF53067 122 291 8.91E-42 T 11-11-2016 S40542_RS09010 8a25f550070489010bcf58d8c9985b6b 303 SUPERFAMILY SSF53067 10 118 1.65E-22 T 11-11-2016 S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Gene3D G3DSA:1.10.150.310 497 628 1.9E-45 T 11-11-2016 IPR023097 Tex RuvX-like domain S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Gene3D G3DSA:1.10.10.650 2 108 2.2E-43 T 11-11-2016 IPR023319 Tex-like protein, HTH domain S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Gene3D G3DSA:3.30.420.140 323 448 2.1E-53 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Pfam PF12836 Helix-hairpin-helix motif 489 553 2.7E-28 T 11-11-2016 S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 SUPERFAMILY SSF53098 319 467 1.67E-51 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Pfam PF09371 Tex-like protein N-terminal domain 8 191 2.8E-63 T 11-11-2016 IPR018974 Tex-like protein, N-terminal S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 SUPERFAMILY SSF47781 468 554 6.67E-28 T 11-11-2016 IPR010994 RuvA domain 2-like S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Pfam PF16921 Tex protein YqgF-like domain 323 449 1.4E-53 T 11-11-2016 IPR032639 Tex protein, YqgF-like domain S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 SMART SM00732 323 422 2.1E-36 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 SMART SM00316 647 718 5.0E-24 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Gene3D G3DSA:1.10.3500.10 109 319 5.1E-94 T 11-11-2016 IPR023323 Tex-like domain S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Gene3D G3DSA:1.10.3500.10 449 496 5.1E-94 T 11-11-2016 IPR023323 Tex-like domain S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 SUPERFAMILY SSF158832 2 318 1.44E-112 T 11-11-2016 S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Pfam PF00575 S1 RNA binding domain 646 718 1.3E-20 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 SUPERFAMILY SSF47781 558 630 2.22E-19 T 11-11-2016 IPR010994 RuvA domain 2-like S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 Gene3D G3DSA:2.40.50.140 631 718 4.3E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS02030 7ccf91bb4059ff6d63625b47fa364344 777 SUPERFAMILY SSF50249 637 725 2.93E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS12930 3ba60c39ef643cea789c953938b60b5b 164 Pfam PF13924 Lipocalin-like domain 60 163 1.1E-7 T 11-11-2016 IPR024311 Lipocalin-like domain S40542_RS14165 3fe65e427eb5910eb67a512961d24896 286 SUPERFAMILY SSF55120 67 235 9.83E-43 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS14165 3fe65e427eb5910eb67a512961d24896 286 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 4.7E-59 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 S40542_RS14165 3fe65e427eb5910eb67a512961d24896 286 Gene3D G3DSA:3.10.290.10 3 61 3.8E-17 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS14165 3fe65e427eb5910eb67a512961d24896 286 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 S40542_RS14165 3fe65e427eb5910eb67a512961d24896 286 Pfam PF01479 S4 domain 4 48 4.2E-11 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS14165 3fe65e427eb5910eb67a512961d24896 286 Pfam PF00849 RNA pseudouridylate synthase 67 228 5.9E-18 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS14165 3fe65e427eb5910eb67a512961d24896 286 SUPERFAMILY SSF55174 5 97 4.56E-16 T 11-11-2016 S40542_RS14165 3fe65e427eb5910eb67a512961d24896 286 SMART SM00363 3 61 7.0E-9 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Gene3D G3DSA:3.30.300.20 204 282 8.4E-33 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 2.8E-123 T 11-11-2016 IPR010213 Transcription termination factor NusA GO:0003723 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 SUPERFAMILY SSF54814 284 348 9.16E-16 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 SUPERFAMILY SSF69705 1 130 2.22E-37 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Gene3D G3DSA:1.10.150.20 437 495 4.0E-21 T 11-11-2016 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 28.433 T 11-11-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Gene3D G3DSA:3.30.1480.10 1 128 8.0E-42 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Pfam PF13184 NusA-like KH domain 235 301 1.1E-27 T 11-11-2016 IPR025249 KH domain, NusA-like GO:0003723 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 SUPERFAMILY SSF47794 434 496 1.54E-15 T 11-11-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Gene3D G3DSA:3.30.300.20 283 352 1.5E-28 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 SUPERFAMILY SSF50249 136 204 5.31E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Pfam PF14520 Helix-hairpin-helix domain 437 491 1.1E-6 T 11-11-2016 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Pfam PF14520 Helix-hairpin-helix domain 376 417 0.0045 T 11-11-2016 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Gene3D G3DSA:1.10.150.20 360 424 7.0E-21 T 11-11-2016 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 SUPERFAMILY SSF47794 360 421 6.59E-16 T 11-11-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Gene3D G3DSA:2.40.50.140 134 202 2.0E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 445 494 5.8E-15 T 11-11-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 370 419 4.6E-18 T 11-11-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 SMART SM00316 138 205 1.3E-9 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 SUPERFAMILY SSF54814 206 283 3.73E-28 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 S40542_RS05980 95a6b78fd822e77c8abe3d3180ca6ec1 499 Pfam PF08529 NusA N-terminal domain 4 128 9.9E-34 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 Gene3D G3DSA:3.90.1150.10 11 144 2.0E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 SUPERFAMILY SSF53383 1 397 1.27E-113 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 Gene3D G3DSA:3.90.1150.10 217 396 6.7E-60 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 11-11-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.6E-77 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-32 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-32 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-32 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 S40542_RS15755 3d3eeef3e2c36ee944d40a0092e09405 397 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-32 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 S40542_RS16235 ab3e9eee10730aff3470738c39535bd7 353 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 13 72 3.7E-10 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS16235 ab3e9eee10730aff3470738c39535bd7 353 Gene3D G3DSA:3.90.79.10 205 350 2.0E-38 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS16235 ab3e9eee10730aff3470738c39535bd7 353 Pfam PF01467 Cytidylyltransferase-like 13 155 4.8E-7 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS16235 ab3e9eee10730aff3470738c39535bd7 353 Pfam PF00293 NUDIX domain 219 344 5.9E-18 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS16235 ab3e9eee10730aff3470738c39535bd7 353 SUPERFAMILY SSF52374 13 161 7.74E-16 T 11-11-2016 S40542_RS16235 ab3e9eee10730aff3470738c39535bd7 353 Gene3D G3DSA:3.40.50.620 8 204 1.1E-39 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS16235 ab3e9eee10730aff3470738c39535bd7 353 SUPERFAMILY SSF55811 205 350 7.45E-29 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 Gene3D G3DSA:1.10.10.60 239 287 1.3E-20 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 SUPERFAMILY SSF46689 239 287 2.69E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 SUPERFAMILY SSF46689 191 235 7.17E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 Gene3D G3DSA:1.10.10.60 191 235 1.8E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 Pfam PF12833 Helix-turn-helix domain 213 286 2.1E-23 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 9.7E-8 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 9.7E-8 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS07150 fb720d8de3c00f5098dc124d5b1dea77 290 SMART SM00342 202 285 5.5E-31 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS01940 8542af88d8af7ccfc4d6754e90a93f88 301 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 18 299 18.781 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 S40542_RS01940 8542af88d8af7ccfc4d6754e90a93f88 301 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 21 298 1.8E-91 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 S40542_RS01940 8542af88d8af7ccfc4d6754e90a93f88 301 Pfam PF01040 UbiA prenyltransferase family 35 282 2.0E-56 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 S40542_RS16805 eee0048529edf58ca8dc7377db5659e3 265 Gene3D G3DSA:1.10.800.10 3 247 9.9E-94 T 11-11-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 S40542_RS16805 eee0048529edf58ca8dc7377db5659e3 265 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 118 129 - T 11-11-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 S40542_RS16805 eee0048529edf58ca8dc7377db5659e3 265 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 9 232 7.3E-49 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 S40542_RS16805 eee0048529edf58ca8dc7377db5659e3 265 SUPERFAMILY SSF56534 4 247 5.23E-100 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 S40542_RS16805 eee0048529edf58ca8dc7377db5659e3 265 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 11 255 1.8E-101 T 11-11-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 S40542_RS16805 eee0048529edf58ca8dc7377db5659e3 265 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 179 197 8.4E-10 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 S40542_RS16805 eee0048529edf58ca8dc7377db5659e3 265 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 75 97 8.4E-10 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 S40542_RS16805 eee0048529edf58ca8dc7377db5659e3 265 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 210 229 8.4E-10 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 S40542_RS01760 ec1da5b95b813f3510d7e3014f25ad59 143 Pfam PF01894 Uncharacterised protein family UPF0047 26 136 5.2E-37 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 S40542_RS01760 ec1da5b95b813f3510d7e3014f25ad59 143 PIRSF PIRSF004681 1 140 8.4E-45 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 S40542_RS01760 ec1da5b95b813f3510d7e3014f25ad59 143 SUPERFAMILY SSF111038 1 139 4.06E-48 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 S40542_RS01760 ec1da5b95b813f3510d7e3014f25ad59 143 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 139 6.1E-43 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 S40542_RS01760 ec1da5b95b813f3510d7e3014f25ad59 143 Gene3D G3DSA:2.60.120.460 1 140 7.3E-56 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 S40542_RS09035 3c10d9ed1bfc449bfe7e36072a4372f6 389 Gene3D G3DSA:3.90.1150.10 254 383 7.7E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS09035 3c10d9ed1bfc449bfe7e36072a4372f6 389 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 197 211 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS09035 3c10d9ed1bfc449bfe7e36072a4372f6 389 SUPERFAMILY SSF53383 22 382 3.89E-98 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS09035 3c10d9ed1bfc449bfe7e36072a4372f6 389 PIRSF PIRSF001434 1 386 3.3E-123 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS09035 3c10d9ed1bfc449bfe7e36072a4372f6 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 382 3.0E-109 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS09035 3c10d9ed1bfc449bfe7e36072a4372f6 389 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 5 383 1.5E-158 T 11-11-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 S40542_RS09035 3c10d9ed1bfc449bfe7e36072a4372f6 389 Gene3D G3DSA:3.40.640.10 4 253 2.5E-77 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS09965 9cb0d6e0f37fdc7b268204ed44c59bdb 401 SUPERFAMILY SSF52172 5 126 9.68E-22 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS09965 9cb0d6e0f37fdc7b268204ed44c59bdb 401 Gene3D G3DSA:3.40.50.2300 4 126 2.8E-21 T 11-11-2016 S40542_RS09965 9cb0d6e0f37fdc7b268204ed44c59bdb 401 SMART SM00448 6 123 2.9E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09965 9cb0d6e0f37fdc7b268204ed44c59bdb 401 Pfam PF00563 EAL domain 149 379 3.8E-59 T 11-11-2016 IPR001633 EAL domain S40542_RS09965 9cb0d6e0f37fdc7b268204ed44c59bdb 401 SUPERFAMILY SSF141868 144 388 3.01E-68 T 11-11-2016 IPR001633 EAL domain S40542_RS09965 9cb0d6e0f37fdc7b268204ed44c59bdb 401 Pfam PF00072 Response regulator receiver domain 8 122 1.5E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09965 9cb0d6e0f37fdc7b268204ed44c59bdb 401 Gene3D G3DSA:3.20.20.450 144 388 3.2E-72 T 11-11-2016 IPR001633 EAL domain S40542_RS09965 9cb0d6e0f37fdc7b268204ed44c59bdb 401 SMART SM00052 138 384 2.3E-69 T 11-11-2016 IPR001633 EAL domain S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 SMART SM00534 613 800 9.5E-118 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Pfam PF01624 MutS domain I 15 126 5.3E-43 T 11-11-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 694 710 - T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Gene3D G3DSA:3.30.420.110 133 262 4.3E-41 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Pfam PF05192 MutS domain III 276 565 1.8E-38 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Gene3D G3DSA:3.40.1170.10 7 127 1.0E-51 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 15 857 0.0 T 11-11-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 14 852 25.049 T 11-11-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Pfam PF05188 MutS domain II 135 260 2.1E-29 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 PIRSF PIRSF005813 4 840 3.3E-129 T 11-11-2016 IPR011184 DNA mismatch repair MutS GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 SMART SM00533 290 597 8.3E-102 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 SUPERFAMILY SSF48334 274 571 8.24E-88 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 SUPERFAMILY SSF55271 8 122 3.27E-42 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Gene3D G3DSA:1.10.1420.10 322 483 4.5E-55 T 11-11-2016 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 SUPERFAMILY SSF53150 121 273 6.15E-43 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Pfam PF00488 MutS domain V 617 803 2.4E-85 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 SUPERFAMILY SSF52540 573 804 8.32E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Gene3D G3DSA:3.40.50.300 573 804 2.1E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17950 44f17c1423f0b392e5316d36f8cddf58 860 Pfam PF05190 MutS family domain IV 434 524 1.6E-30 T 11-11-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 S40542_RS16170 21b5db80773a07f509658343a1794296 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 4 402 1.1E-51 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS16170 21b5db80773a07f509658343a1794296 447 Pfam PF01554 MatE 233 387 8.2E-20 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS16170 21b5db80773a07f509658343a1794296 447 Pfam PF01554 MatE 4 164 7.8E-18 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS16170 21b5db80773a07f509658343a1794296 447 PIRSF PIRSF006603 1 434 2.5E-70 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS02635 92be628ba217f0dff86db2cb5b36a0e5 607 SUPERFAMILY SSF56601 28 357 2.82E-62 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS02635 92be628ba217f0dff86db2cb5b36a0e5 607 Gene3D G3DSA:3.40.710.10 16 358 2.5E-61 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS02635 92be628ba217f0dff86db2cb5b36a0e5 607 Pfam PF00144 Beta-lactamase 28 355 1.2E-45 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS15905 c32108604484c6c0f3eba5a1727a9f82 139 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 33 118 3.7E-20 T 11-11-2016 IPR031982 Type IV minor pilin ComP S40542_RS15905 c32108604484c6c0f3eba5a1727a9f82 139 SUPERFAMILY SSF54523 12 125 1.78E-23 T 11-11-2016 S40542_RS15905 c32108604484c6c0f3eba5a1727a9f82 139 Gene3D G3DSA:3.30.700.10 12 112 1.3E-18 T 11-11-2016 S40542_RS15905 c32108604484c6c0f3eba5a1727a9f82 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 5.6E-10 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 S40542_RS15905 c32108604484c6c0f3eba5a1727a9f82 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 5.6E-10 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 S40542_RS15905 c32108604484c6c0f3eba5a1727a9f82 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 4.0E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 SUPERFAMILY SSF47384 190 271 2.16E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 Pfam PF11808 Domain of unknown function (DUF3329) 8 90 1.5E-27 T 11-11-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 SMART SM00388 204 271 5.1E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 SMART SM00387 316 428 2.1E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 SUPERFAMILY SSF55785 88 196 8.03E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 Gene3D G3DSA:3.30.450.20 98 195 5.0E-8 T 11-11-2016 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 427 7.9E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 7.7E-137 T 11-11-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 Gene3D G3DSA:1.10.287.130 196 257 5.8E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 Gene3D G3DSA:3.30.565.10 258 427 1.1E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 SUPERFAMILY SSF55874 260 426 3.27E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03600 c0ae2789f854755e3d90d620a8a63265 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 204 270 1.9E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00115 06df5b8a056984485f5c1dccc06b991f 192 SUPERFAMILY SSF57783 66 100 1.68E-12 T 11-11-2016 S40542_RS00115 06df5b8a056984485f5c1dccc06b991f 192 Gene3D G3DSA:3.30.65.10 113 145 1.1E-5 T 11-11-2016 S40542_RS00115 06df5b8a056984485f5c1dccc06b991f 192 Gene3D G3DSA:3.30.65.10 64 98 1.3E-14 T 11-11-2016 S40542_RS00115 06df5b8a056984485f5c1dccc06b991f 192 Gene3D G3DSA:3.30.65.10 22 60 8.1E-13 T 11-11-2016 S40542_RS00115 06df5b8a056984485f5c1dccc06b991f 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 71 103 1.4E-15 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 S40542_RS00115 06df5b8a056984485f5c1dccc06b991f 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 53 1.2E-15 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 S40542_RS00115 06df5b8a056984485f5c1dccc06b991f 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 113 147 2.4E-11 T 11-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 S40542_RS00115 06df5b8a056984485f5c1dccc06b991f 192 SUPERFAMILY SSF57783 21 63 2.04E-11 T 11-11-2016 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 Gene3D G3DSA:1.20.140.10 304 463 1.1E-29 T 11-11-2016 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 Gene3D G3DSA:2.40.110.10 193 303 1.7E-17 T 11-11-2016 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 316 461 1.5E-13 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 193 293 9.8E-9 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 78 189 6.6E-18 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 SUPERFAMILY SSF47203 316 462 1.32E-25 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 Pfam PF09317 Domain of unknown function (DUF1974) 471 751 2.4E-82 T 11-11-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 Gene3D G3DSA:1.10.540.10 52 190 4.9E-28 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 S40542_RS13435 665c12e6235f8d5ddcf56c70aea69544 756 SUPERFAMILY SSF56645 75 311 4.45E-46 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 S40542_RS06010 50ce25fdd746f243f1ec7bd30bdcc535 284 SMART SM00028 123 156 5.3 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS06010 50ce25fdd746f243f1ec7bd30bdcc535 284 SMART SM00028 55 88 0.23 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS06010 50ce25fdd746f243f1ec7bd30bdcc535 284 SMART SM00028 89 122 0.072 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS06010 50ce25fdd746f243f1ec7bd30bdcc535 284 SMART SM00028 227 260 83.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS06010 50ce25fdd746f243f1ec7bd30bdcc535 284 PIRSF PIRSF004654 2 283 2.0E-101 T 11-11-2016 IPR023605 Lipoprotein NlpI S40542_RS06010 50ce25fdd746f243f1ec7bd30bdcc535 284 SUPERFAMILY SSF48452 26 275 1.78E-62 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06010 50ce25fdd746f243f1ec7bd30bdcc535 284 Pfam PF13181 Tetratricopeptide repeat 55 87 0.0021 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS06010 50ce25fdd746f243f1ec7bd30bdcc535 284 Gene3D G3DSA:1.25.40.10 40 258 4.6E-27 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12075 72eef5a358e427ec802bc34988c3f8f8 88 Gene3D G3DSA:3.30.70.100 1 87 5.2E-26 T 11-11-2016 S40542_RS12075 72eef5a358e427ec802bc34988c3f8f8 88 Pfam PF00708 Acylphosphatase 1 87 5.3E-24 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 S40542_RS12075 72eef5a358e427ec802bc34988c3f8f8 88 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 11-11-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 S40542_RS12075 72eef5a358e427ec802bc34988c3f8f8 88 SUPERFAMILY SSF54975 2 87 1.05E-24 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 S40542_RS13755 a8d213df45b767c0a6aed13afe1f158f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 2.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13755 a8d213df45b767c0a6aed13afe1f158f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 33 50 2.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13755 a8d213df45b767c0a6aed13afe1f158f 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 2.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13755 a8d213df45b767c0a6aed13afe1f158f 273 SUPERFAMILY SSF51735 34 272 6.67E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13755 a8d213df45b767c0a6aed13afe1f158f 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 38 271 5.8E-37 T 11-11-2016 S40542_RS13755 a8d213df45b767c0a6aed13afe1f158f 273 Gene3D G3DSA:3.40.50.720 34 272 7.4E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13755 a8d213df45b767c0a6aed13afe1f158f 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 166 194 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 492 6.0E-27 T 11-11-2016 IPR025158 Mg chelatase-related protein, C-terminal domain S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.4E-42 T 11-11-2016 S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 393 2.7E-87 T 11-11-2016 IPR000523 Magnesium chelatase ChlI domain S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 291 305 7.1E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 211 226 7.1E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 319 332 7.1E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 291 306 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 SUPERFAMILY SSF54211 8 163 3.26E-27 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 SMART SM00382 212 390 2.9E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 SUPERFAMILY SSF52540 191 499 4.57E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 Gene3D G3DSA:3.40.50.300 192 386 1.1E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 Gene3D G3DSA:3.30.230.10 8 150 2.6E-24 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS19210 13c57ae607b4bded8668d079fa064965 503 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 492 1.2E-183 T 11-11-2016 IPR004482 Mg chelatase-related protein S40542_RS16705 b015c6020035db5d1e19f60bbad6b7f3 269 SUPERFAMILY SSF49354 21 156 8.63E-13 T 11-11-2016 IPR008962 PapD-like S40542_RS16705 b015c6020035db5d1e19f60bbad6b7f3 269 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 87 157 1.2E-4 T 11-11-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 S40542_RS16705 b015c6020035db5d1e19f60bbad6b7f3 269 Gene3D G3DSA:2.60.40.360 25 155 2.8E-7 T 11-11-2016 IPR008962 PapD-like S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 Pfam PF01546 Peptidase family M20/M25/M40 67 376 2.5E-39 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 Gene3D G3DSA:3.30.70.360 193 292 2.3E-35 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 SUPERFAMILY SSF53187 7 183 1.8E-62 T 11-11-2016 S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 SUPERFAMILY SSF53187 297 378 1.8E-62 T 11-11-2016 S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 Pfam PF07687 Peptidase dimerisation domain 180 287 6.9E-26 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 SUPERFAMILY SSF55031 184 293 2.99E-29 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 10 378 2.9E-165 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 102 140 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 7 380 51.476 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 Gene3D G3DSA:3.40.630.10 321 379 3.4E-67 T 11-11-2016 S40542_RS12145 b420971e28db5d72f50ba0afc7de9f7d 382 Gene3D G3DSA:3.40.630.10 7 192 3.4E-67 T 11-11-2016 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 SUPERFAMILY SSF47917 346 460 1.49E-53 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 6.3E-63 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 SMART SM00382 143 328 0.0023 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 461 1.1E-255 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 SUPERFAMILY SSF50615 1 76 9.42E-23 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 Gene3D G3DSA:2.40.10.170 2 76 1.3E-26 T 11-11-2016 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 4.6E-16 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 56.14 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 SUPERFAMILY SSF52540 78 348 2.74E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 Gene3D G3DSA:3.40.50.300 77 344 1.2E-107 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20695 75a2bbb4cdd5bab1530ce5335bf0397f 461 Gene3D G3DSA:1.10.1140.10 346 461 6.5E-56 T 11-11-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 SUPERFAMILY SSF51905 6 163 2.04E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 SUPERFAMILY SSF51905 259 348 2.04E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 Pfam PF01494 FAD binding domain 7 307 8.9E-19 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 Gene3D G3DSA:3.50.50.60 6 169 3.3E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 Gene3D G3DSA:3.50.50.60 260 332 3.3E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 303 6.9E-15 T 11-11-2016 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.9E-15 T 11-11-2016 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 272 287 6.9E-15 T 11-11-2016 S40542_RS07360 4b366efc445af31781c693ac9f378738 373 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 141 156 6.9E-15 T 11-11-2016 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 SUPERFAMILY SSF55103 274 565 1.24E-109 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 SUPERFAMILY SSF56176 9 271 1.96E-73 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 Gene3D G3DSA:3.30.43.10 5 96 4.0E-12 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 276 565 6.8E-136 T 11-11-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 Gene3D G3DSA:3.30.1370.20 433 516 2.8E-33 T 11-11-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 Gene3D G3DSA:3.30.70.610 267 308 9.6E-41 T 11-11-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 Gene3D G3DSA:3.30.70.610 375 432 9.6E-41 T 11-11-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 PIRSF PIRSF000101 2 567 2.6E-271 T 11-11-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 Pfam PF01565 FAD binding domain 45 164 6.2E-8 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 S40542_RS13470 272de66a3e5c6a60bdd4765e7450da08 571 Gene3D G3DSA:3.30.465.10 105 266 1.3E-77 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 S40542_RS15825 b3b6dcdc55f8f8693633c34afa832d03 349 Gene3D G3DSA:1.10.3470.10 13 346 8.6E-104 T 11-11-2016 IPR029022 ABC transporter, BtuC-like S40542_RS15825 b3b6dcdc55f8f8693633c34afa832d03 349 SUPERFAMILY SSF81345 12 342 2.22E-81 T 11-11-2016 IPR029022 ABC transporter, BtuC-like S40542_RS15825 b3b6dcdc55f8f8693633c34afa832d03 349 Pfam PF01032 FecCD transport family 24 342 3.9E-92 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 SUPERFAMILY SSF49785 895 1056 2.81E-39 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 Gene3D G3DSA:2.60.120.200 39 237 1.2E-83 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 Gene3D G3DSA:2.60.120.200 276 324 1.2E-83 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 SUPERFAMILY SSF49785 542 731 3.23E-39 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 SUPERFAMILY SSF49785 365 536 3.06E-29 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 SUPERFAMILY SSF49899 276 324 1.87E-77 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 SUPERFAMILY SSF49899 36 237 1.87E-77 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 Gene3D G3DSA:2.60.120.360 947 1056 2.2E-6 T 11-11-2016 S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 Gene3D G3DSA:2.60.120.360 609 714 3.0E-5 T 11-11-2016 S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 Gene3D G3DSA:2.60.120.360 771 884 8.3E-4 T 11-11-2016 S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 SUPERFAMILY SSF49785 725 888 7.82E-37 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS10015 7ca35c8e1aca98e4c86c807c5f467bb6 1058 Pfam PF00722 Glycosyl hydrolases family 16 78 242 3.0E-26 T 11-11-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 S40542_RS02665 4dcd846ce480a9c41d865b5a9e2ea0dd 599 Pfam PF00005 ABC transporter 385 536 1.1E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS02665 4dcd846ce480a9c41d865b5a9e2ea0dd 599 SMART SM00382 391 590 3.6E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS02665 4dcd846ce480a9c41d865b5a9e2ea0dd 599 SUPERFAMILY SSF90123 33 347 2.09E-35 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS02665 4dcd846ce480a9c41d865b5a9e2ea0dd 599 Gene3D G3DSA:1.20.1560.10 32 354 3.5E-27 T 11-11-2016 S40542_RS02665 4dcd846ce480a9c41d865b5a9e2ea0dd 599 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS02665 4dcd846ce480a9c41d865b5a9e2ea0dd 599 SUPERFAMILY SSF52540 360 593 1.05E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02665 4dcd846ce480a9c41d865b5a9e2ea0dd 599 Gene3D G3DSA:3.40.50.300 363 594 3.9E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02665 4dcd846ce480a9c41d865b5a9e2ea0dd 599 Pfam PF00664 ABC transporter transmembrane region 43 310 4.1E-11 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 SMART SM00977 366 434 6.0E-17 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 312 23.005 T 11-11-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 Gene3D G3DSA:3.40.50.620 11 187 2.3E-14 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 Pfam PF09179 TilS substrate binding domain 254 317 7.2E-17 T 11-11-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 26 209 1.9E-53 T 11-11-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 366 412 2.7E-8 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 SUPERFAMILY SSF56037 339 430 1.49E-19 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 Pfam PF01171 PP-loop family 27 206 9.2E-53 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 Pfam PF11734 TilS substrate C-terminal domain 366 429 4.0E-19 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 SUPERFAMILY SSF52402 25 238 1.41E-55 T 11-11-2016 S40542_RS06700 ab16bf804ab3deddc2dc311d0b5dd864 441 SUPERFAMILY SSF82829 243 322 8.89E-22 T 11-11-2016 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 Gene3D G3DSA:3.30.420.40 1 43 8.4E-30 T 11-11-2016 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 Gene3D G3DSA:3.30.420.40 88 220 8.4E-30 T 11-11-2016 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 SUPERFAMILY SSF53067 1 44 7.77E-26 T 11-11-2016 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 SUPERFAMILY SSF53067 88 209 7.77E-26 T 11-11-2016 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 Pfam PF00012 Hsp70 protein 130 234 2.2E-12 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 Pfam PF00012 Hsp70 protein 325 430 7.3E-5 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 Gene3D G3DSA:3.30.420.40 221 284 3.4E-13 T 11-11-2016 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 Gene3D G3DSA:3.30.420.40 342 431 3.4E-13 T 11-11-2016 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 SUPERFAMILY SSF53067 211 279 4.57E-28 T 11-11-2016 S40542_RS05830 533439f146c2264d266b2eb24f4675b7 453 SUPERFAMILY SSF53067 331 449 4.57E-28 T 11-11-2016 S40542_RS11675 9bcbcff3616a4c32fa4e855927955ef1 119 Pfam PF02635 DsrE/DsrF-like family 3 118 4.2E-16 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein S40542_RS11675 9bcbcff3616a4c32fa4e855927955ef1 119 Gene3D G3DSA:3.40.1260.10 1 118 1.3E-30 T 11-11-2016 IPR027396 DsrEFH-like S40542_RS11675 9bcbcff3616a4c32fa4e855927955ef1 119 SUPERFAMILY SSF75169 3 117 1.11E-26 T 11-11-2016 IPR027396 DsrEFH-like S40542_RS20715 af8653d06d7519965260d42f2ba9d8ea 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 11 156 3.6E-50 T 11-11-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 S40542_RS20715 af8653d06d7519965260d42f2ba9d8ea 156 Gene3D G3DSA:1.20.5.620 63 122 9.4E-22 T 11-11-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain S40542_RS20715 af8653d06d7519965260d42f2ba9d8ea 156 SUPERFAMILY SSF81573 63 121 2.35E-14 T 11-11-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain S40542_RS20715 af8653d06d7519965260d42f2ba9d8ea 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 5.0E-36 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 S40542_RS20715 af8653d06d7519965260d42f2ba9d8ea 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.966 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 S40542_RS13820 685346483cd3913a589ba3c7d7c90265 403 Pfam PF12146 Serine aminopeptidase, S33 44 133 5.4E-13 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 S40542_RS13820 685346483cd3913a589ba3c7d7c90265 403 Pfam PF02566 OsmC-like protein 294 397 5.5E-19 T 11-11-2016 IPR003718 OsmC/Ohr family S40542_RS13820 685346483cd3913a589ba3c7d7c90265 403 SUPERFAMILY SSF82784 225 399 9.68E-42 T 11-11-2016 IPR003718 OsmC/Ohr family S40542_RS13820 685346483cd3913a589ba3c7d7c90265 403 Gene3D G3DSA:3.30.300.20 271 400 2.1E-42 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS13820 685346483cd3913a589ba3c7d7c90265 403 Gene3D G3DSA:3.40.50.1820 176 248 7.1E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13820 685346483cd3913a589ba3c7d7c90265 403 Gene3D G3DSA:3.40.50.1820 2 134 7.1E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13820 685346483cd3913a589ba3c7d7c90265 403 SUPERFAMILY SSF53474 178 248 9.32E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13820 685346483cd3913a589ba3c7d7c90265 403 SUPERFAMILY SSF53474 5 136 9.32E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11005 c1435c61613e4e39a12a36f21f324794 272 Pfam PF01551 Peptidase family M23 163 258 6.5E-26 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS11005 c1435c61613e4e39a12a36f21f324794 272 SUPERFAMILY SSF51261 80 260 3.01E-47 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS11005 c1435c61613e4e39a12a36f21f324794 272 Gene3D G3DSA:2.70.70.10 120 262 2.3E-36 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SUPERFAMILY SSF56801 1506 2024 1.83E-107 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:2.30.38.10 1814 1896 1.2E-19 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:2.30.38.10 811 883 1.2E-19 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SUPERFAMILY SSF52777 238 484 4.78E-43 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:1.10.1200.10 2015 2082 1.4E-21 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:1.10.1200.10 1003 1060 6.4E-20 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1655 1666 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:3.40.50.980 503 657 1.6E-39 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:3.40.50.980 1512 1660 4.7E-29 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SUPERFAMILY SSF52777 74 236 6.89E-25 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF00668 Condensation domain 1080 1348 1.5E-44 T 11-11-2016 IPR001242 Condensation domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF00668 Condensation domain 72 348 6.3E-41 T 11-11-2016 IPR001242 Condensation domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF13193 AMP-binding enzyme C-terminal domain 902 973 1.5E-9 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF13193 AMP-binding enzyme C-terminal domain 1914 1986 1.4E-6 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SUPERFAMILY SSF52777 1244 1490 3.34E-40 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SMART SM00823 Phosphopantetheine attachment site 2011 2080 0.0069 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SUPERFAMILY SSF47336 2004 2077 1.06E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:3.30.300.30 1904 2014 1.4E-28 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:3.30.300.30 890 1002 1.0E-31 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:3.40.50.980 658 810 1.2E-32 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Gene3D G3DSA:3.40.50.980 1661 1813 4.5E-31 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 531 918 5.7E-110 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF00550 Phosphopantetheine attachment site 2014 2076 4.8E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF00550 Phosphopantetheine attachment site 999 1061 1.5E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SUPERFAMILY SSF47336 990 1060 9.68E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SUPERFAMILY SSF52777 1081 1240 1.78E-26 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF13745 HxxPF-repeated domain 1374 1467 5.4E-9 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 SUPERFAMILY SSF56801 503 1011 2.88E-121 T 11-11-2016 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF00501 AMP-binding enzyme 1518 1902 1.3E-61 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS00875 4842b80acac13cd1ae4d2fd561e162d8 2094 Pfam PF00501 AMP-binding enzyme 510 894 2.5E-80 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS25565 7539b5a15260363b849e328b4fa813c1 221 SUPERFAMILY SSF51445 147 195 2.24E-7 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS25565 7539b5a15260363b849e328b4fa813c1 221 Gene3D G3DSA:3.20.20.80 145 219 5.4E-10 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS25565 7539b5a15260363b849e328b4fa813c1 221 Pfam PF08329 Chitinase A, N-terminal domain 9 135 1.1E-33 T 11-11-2016 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 S40542_RS25565 7539b5a15260363b849e328b4fa813c1 221 Gene3D G3DSA:2.60.40.10 10 117 2.4E-23 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS25565 7539b5a15260363b849e328b4fa813c1 221 SUPERFAMILY SSF81296 10 117 1.96E-18 T 11-11-2016 IPR014756 Immunoglobulin E-set S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 Gene3D G3DSA:2.40.10.10 151 283 7.3E-45 T 11-11-2016 S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 SMART SM00020 47 279 3.1E-75 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 89 94 - T 11-11-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 SUPERFAMILY SSF50494 31 284 1.59E-73 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 Gene3D G3DSA:2.40.10.10 85 150 1.8E-19 T 11-11-2016 S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 SMART SM00089 731 818 0.12 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 SMART SM00089 545 634 2.4 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 137 151 6.9E-12 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 229 241 6.9E-12 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 79 94 6.9E-12 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 230 241 - T 11-11-2016 IPR033116 Serine proteases, trypsin family, serine active site S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 SUPERFAMILY SSF49299 727 818 1.06E-5 T 11-11-2016 IPR000601 PKD domain S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 Pfam PF00089 Trypsin 48 278 6.0E-59 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 S40542_RS06810 c737c98198ba1acda111fab10b23e4c8 847 Gene3D G3DSA:2.40.10.10 48 84 2.6E-11 T 11-11-2016 S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 Gene3D G3DSA:3.90.650.10 143 320 2.0E-43 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 320 6.2E-104 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 Gene3D G3DSA:3.30.1330.10 1 139 1.9E-47 T 11-11-2016 IPR016188 PurM-like, N-terminal domain S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 SUPERFAMILY SSF56042 142 304 1.79E-36 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 317 29.53 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 296 2.8E-14 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 136 3.9E-25 T 11-11-2016 IPR016188 PurM-like, N-terminal domain S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 PIRSF PIRSF005303 1 320 2.1E-84 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 S40542_RS05495 09d1f8b9d8ce917491400bebafb53d48 321 SUPERFAMILY SSF55326 2 136 1.64E-37 T 11-11-2016 S40542_RS11200 1f79b2449abb1f112a24ab5e79d63a30 240 SUPERFAMILY SSF52540 6 230 1.13E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11200 1f79b2449abb1f112a24ab5e79d63a30 240 Gene3D G3DSA:3.40.50.300 5 227 2.2E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11200 1f79b2449abb1f112a24ab5e79d63a30 240 Pfam PF00005 ABC transporter 26 176 7.4E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS11200 1f79b2449abb1f112a24ab5e79d63a30 240 SMART SM00382 35 237 4.0E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11200 1f79b2449abb1f112a24ab5e79d63a30 240 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 Gene3D G3DSA:3.40.50.720 9 244 4.5E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 Pfam PF00106 short chain dehydrogenase 14 209 1.3E-48 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 9.3E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 9.3E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 9.3E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 9.3E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 9.3E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 9.3E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS14160 25d2b83197a2cf79a2c25b9306572ee6 247 SUPERFAMILY SSF51735 10 242 6.99E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18325 371f8d8614928df2314004a2a731331b 485 SUPERFAMILY SSF52402 178 375 2.28E-43 T 11-11-2016 S40542_RS18325 371f8d8614928df2314004a2a731331b 485 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 5 378 2.5E-112 T 11-11-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 S40542_RS18325 371f8d8614928df2314004a2a731331b 485 SMART SM00981 78 168 1.1E-18 T 11-11-2016 IPR004114 THUMP domain GO:0003723 S40542_RS18325 371f8d8614928df2314004a2a731331b 485 SUPERFAMILY SSF143437 3 176 7.85E-44 T 11-11-2016 S40542_RS18325 371f8d8614928df2314004a2a731331b 485 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 386 485 8.5E-38 T 11-11-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 S40542_RS18325 371f8d8614928df2314004a2a731331b 485 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 179 372 9.2E-69 T 11-11-2016 IPR020536 Thil, AANH domain GO:0004810 S40542_RS18325 371f8d8614928df2314004a2a731331b 485 SUPERFAMILY SSF52821 399 484 1.31E-12 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS18325 371f8d8614928df2314004a2a731331b 485 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 485 204.199 T 11-11-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 S40542_RS18325 371f8d8614928df2314004a2a731331b 485 Gene3D G3DSA:3.40.250.10 401 483 1.1E-11 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS18325 371f8d8614928df2314004a2a731331b 485 Pfam PF02926 THUMP domain 47 164 7.0E-19 T 11-11-2016 IPR004114 THUMP domain GO:0003723 S40542_RS18325 371f8d8614928df2314004a2a731331b 485 Gene3D G3DSA:3.40.50.620 176 336 3.7E-36 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS11620 438d9739dfa29704f6376d280654073f 676 Gene3D G3DSA:3.90.226.10 336 555 4.6E-65 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS11620 438d9739dfa29704f6376d280654073f 676 SMART SM00228 245 322 3.7E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS11620 438d9739dfa29704f6376d280654073f 676 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 237 317 3.7E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS11620 438d9739dfa29704f6376d280654073f 676 Gene3D G3DSA:3.30.750.44 156 250 1.3E-6 T 11-11-2016 S40542_RS11620 438d9739dfa29704f6376d280654073f 676 Pfam PF03572 Peptidase family S41 360 528 1.7E-51 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS11620 438d9739dfa29704f6376d280654073f 676 Gene3D G3DSA:2.30.42.10 251 335 7.9E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS11620 438d9739dfa29704f6376d280654073f 676 SUPERFAMILY SSF50156 245 316 2.8E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS11620 438d9739dfa29704f6376d280654073f 676 SMART SM00245 326 531 6.0E-58 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS11620 438d9739dfa29704f6376d280654073f 676 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 534 666 2.6E-37 T 11-11-2016 IPR020992 Tail specific protease, C-terminal S40542_RS11620 438d9739dfa29704f6376d280654073f 676 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 551 2.6E-103 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 S40542_RS11620 438d9739dfa29704f6376d280654073f 676 SUPERFAMILY SSF52096 354 542 9.44E-71 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS11620 438d9739dfa29704f6376d280654073f 676 SUPERFAMILY SSF52096 167 263 9.44E-71 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS15895 1d254c97c4cc985aca18b4d562b479a0 180 SUPERFAMILY SSF54523 7 111 1.88E-9 T 11-11-2016 S40542_RS15895 1d254c97c4cc985aca18b4d562b479a0 180 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS15895 1d254c97c4cc985aca18b4d562b479a0 180 Pfam PF12019 Type II transport protein GspH 45 165 2.4E-7 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 S40542_RS15895 1d254c97c4cc985aca18b4d562b479a0 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 8.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 Gene3D G3DSA:2.40.110.10 130 225 2.2E-41 T 11-11-2016 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.0E-27 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 386 1.1E-44 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 6.9E-38 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 133 145 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 SUPERFAMILY SSF56645 10 251 1.44E-86 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 Gene3D G3DSA:1.10.540.10 7 129 4.8E-43 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 Gene3D G3DSA:1.20.140.10 226 390 2.7E-66 T 11-11-2016 S40542_RS13875 f73d532b7fba1b2bde716bcf239f5b31 391 SUPERFAMILY SSF47203 238 389 6.44E-47 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 SMART SM00283 281 542 3.9E-62 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 SUPERFAMILY SSF58104 234 543 1.02E-76 T 11-11-2016 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 Gene3D G3DSA:1.10.287.950 296 512 5.3E-56 T 11-11-2016 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 4.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 4.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 4.0E-22 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 SMART SM00304 212 266 4.1E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 541 2.8E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 Pfam PF00672 HAMP domain 193 261 8.0E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS09830 a9c898b77f902d2aada81ee49ead15ef 544 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 180 2.9E-7 T 11-11-2016 IPR024478 4HB MCP domain S40542_RS06130 8f77c0a5690d0e7d33d41daa6f252b4e 414 Pfam PF00700 Bacterial flagellin C-terminal helical region 333 413 3.5E-7 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06130 8f77c0a5690d0e7d33d41daa6f252b4e 414 SUPERFAMILY SSF64518 1 414 1.31E-67 T 11-11-2016 S40542_RS06130 8f77c0a5690d0e7d33d41daa6f252b4e 414 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 140 1.5E-18 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06130 8f77c0a5690d0e7d33d41daa6f252b4e 414 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 413 1.2E-70 T 11-11-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 S40542_RS06130 8f77c0a5690d0e7d33d41daa6f252b4e 414 Gene3D G3DSA:1.20.1330.10 55 138 7.0E-17 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06130 8f77c0a5690d0e7d33d41daa6f252b4e 414 Gene3D G3DSA:1.20.1330.10 233 234 7.0E-17 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06130 8f77c0a5690d0e7d33d41daa6f252b4e 414 Gene3D G3DSA:1.20.1330.10 318 367 7.0E-17 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS10680 1768a30fa36f2fb26a6a4bf3365bbc01 339 SUPERFAMILY SSF53800 18 338 5.36E-102 T 11-11-2016 S40542_RS10680 1768a30fa36f2fb26a6a4bf3365bbc01 339 TIGRFAM TIGR00109 hemH: ferrochelatase 18 336 4.7E-97 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 S40542_RS10680 1768a30fa36f2fb26a6a4bf3365bbc01 339 Gene3D G3DSA:3.40.50.1400 18 219 1.8E-66 T 11-11-2016 S40542_RS10680 1768a30fa36f2fb26a6a4bf3365bbc01 339 Gene3D G3DSA:3.40.50.1400 220 338 7.4E-31 T 11-11-2016 S40542_RS10680 1768a30fa36f2fb26a6a4bf3365bbc01 339 Hamap MF_00323 Ferrochelatase [hemH]. 18 339 36.068 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 S40542_RS10680 1768a30fa36f2fb26a6a4bf3365bbc01 339 Pfam PF00762 Ferrochelatase 19 337 2.3E-108 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 Gene3D G3DSA:3.30.1330.60 185 288 2.6E-27 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 Pfam PF00691 OmpA family 187 282 2.7E-18 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 SUPERFAMILY SSF103088 158 288 1.16E-27 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01021 OMPA domain signature 233 249 5.3E-6 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01021 OMPA domain signature 187 209 5.3E-6 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01021 OMPA domain signature 218 233 5.3E-6 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.0E-53 T 11-11-2016 S40542_RS08625 47efd5daa84c33d104b364a1766466c8 291 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.0E-53 T 11-11-2016 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 SMART SM00481 7 74 4.8E-22 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 734 5.6E-170 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 Pfam PF01336 OB-fold nucleic acid binding domain 1001 1075 3.4E-7 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 Pfam PF14579 Helix-hairpin-helix motif 809 897 1.9E-25 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 Gene3D G3DSA:2.40.50.140 993 1082 1.7E-7 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1035 0.0 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 Gene3D G3DSA:3.20.20.140 6 257 2.0E-20 T 11-11-2016 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 Pfam PF02811 PHP domain 8 172 4.8E-42 T 11-11-2016 IPR004013 PHP domain GO:0003824 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 SUPERFAMILY SSF89550 6 263 6.47E-15 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 S40542_RS06690 91591df5342710ddf7b1eda8f04648ba 1163 Gene3D G3DSA:1.10.150.280 833 878 2.7E-6 T 11-11-2016 S40542_RS18330 c6586130314f57694fcab979b382cfa7 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 6.4E-11 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS18330 c6586130314f57694fcab979b382cfa7 218 SUPERFAMILY SSF46689 2 75 4.82E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS18330 c6586130314f57694fcab979b382cfa7 218 Pfam PF13972 Bacterial transcriptional repressor 57 197 8.7E-37 T 11-11-2016 IPR025722 Bacterial transcriptional repressor TetR S40542_RS18330 c6586130314f57694fcab979b382cfa7 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.2E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS18330 c6586130314f57694fcab979b382cfa7 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.2E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS18330 c6586130314f57694fcab979b382cfa7 218 Gene3D G3DSA:1.10.357.10 2 159 4.4E-28 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 Pfam PF03466 LysR substrate binding domain 91 293 7.9E-43 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 Gene3D G3DSA:3.40.190.10 92 184 1.6E-20 T 11-11-2016 S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 6.5E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 SUPERFAMILY SSF53850 92 317 1.36E-42 T 11-11-2016 S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 Gene3D G3DSA:1.10.10.10 1 81 3.0E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 SUPERFAMILY SSF46785 1 86 2.06E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.9E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.9E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.9E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14965 d99ec355b41fa1078b6209d93b41d5df 325 Gene3D G3DSA:3.40.190.10 185 261 3.4E-26 T 11-11-2016 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 191 723 1.2E-154 T 11-11-2016 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 SUPERFAMILY SSF56601 391 765 4.63E-105 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 SUPERFAMILY SSF56601 340 362 4.63E-105 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 PIRSF PIRSF002799 4 774 1.0E-303 T 11-11-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 Pfam PF14814 Bifunctional transglycosylase second domain 93 174 1.0E-18 T 11-11-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 47 763 9.9E-259 T 11-11-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 Gene3D G3DSA:3.30.2060.10 90 177 1.1E-21 T 11-11-2016 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 Gene3D G3DSA:3.40.710.10 362 765 1.8E-102 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 Gene3D G3DSA:1.10.3810.10 183 361 1.8E-69 T 11-11-2016 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 457 690 9.7E-21 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 Pfam PF00912 Transglycosylase 186 358 1.1E-58 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 S40542_RS04910 527dc100454012a784b35f7cba1a18c9 774 SUPERFAMILY SSF53955 187 385 7.87E-69 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS09595 0e14c9c5353d57e5cb179ff6b44eedce 405 SUPERFAMILY SSF51445 29 259 1.27E-48 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS09595 0e14c9c5353d57e5cb179ff6b44eedce 405 SUPERFAMILY SSF51445 305 353 1.27E-48 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS09595 0e14c9c5353d57e5cb179ff6b44eedce 405 ProSitePatterns PS01095 Chitinases family 18 active site. 130 138 - T 11-11-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 S40542_RS09595 0e14c9c5353d57e5cb179ff6b44eedce 405 SMART SM00636 29 325 1.5E-25 T 11-11-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 S40542_RS09595 0e14c9c5353d57e5cb179ff6b44eedce 405 Pfam PF00704 Glycosyl hydrolases family 18 32 325 2.3E-40 T 11-11-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 S40542_RS09595 0e14c9c5353d57e5cb179ff6b44eedce 405 Gene3D G3DSA:3.20.20.80 29 343 1.4E-51 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS09030 72c88a73dd15d912d7594b093e2d8f66 317 Pfam PF00293 NUDIX domain 186 282 5.3E-16 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS09030 72c88a73dd15d912d7594b093e2d8f66 317 SUPERFAMILY SSF55811 128 296 7.31E-43 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS09030 72c88a73dd15d912d7594b093e2d8f66 317 ProSitePatterns PS00893 Nudix box signature. 209 230 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 S40542_RS09030 72c88a73dd15d912d7594b093e2d8f66 317 Gene3D G3DSA:3.90.79.10 127 287 9.5E-44 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS09030 72c88a73dd15d912d7594b093e2d8f66 317 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 30 134 1.6E-8 T 11-11-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 S40542_RS09030 72c88a73dd15d912d7594b093e2d8f66 317 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 136 169 4.7E-8 T 11-11-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 Pfam PF00072 Response regulator receiver domain 20 129 2.6E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 SUPERFAMILY SSF109604 323 498 9.14E-37 T 11-11-2016 S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 Pfam PF11849 Domain of unknown function (DUF3369) 140 312 4.9E-40 T 11-11-2016 IPR021800 Domain of unknown function DUF3369 S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 Gene3D G3DSA:1.10.3210.10 318 505 1.2E-20 T 11-11-2016 IPR006674 HD domain S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 SMART SM00471 330 467 6.3E-9 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 Pfam PF01966 HD domain 336 457 1.8E-16 T 11-11-2016 IPR006674 HD domain S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 Gene3D G3DSA:3.40.50.2300 19 160 2.8E-13 T 11-11-2016 S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 SMART SM00448 18 140 0.0044 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02630 95e284b509e224aafbd39c3c5d9eebb2 509 SUPERFAMILY SSF52172 18 186 7.97E-15 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.0E-54 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.0E-54 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 PRINTS PR00301 70kDa heat shock protein signature 363 383 1.0E-54 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 PRINTS PR00301 70kDa heat shock protein signature 332 348 1.0E-54 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.0E-54 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.0E-54 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.0E-54 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.0E-54 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 42.082 T 11-11-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Gene3D G3DSA:1.20.1270.10 531 619 1.2E-24 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 SUPERFAMILY SSF100934 507 619 3.73E-32 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 SUPERFAMILY SSF100920 387 537 1.31E-49 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 SUPERFAMILY SSF53067 200 380 1.22E-49 T 11-11-2016 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Gene3D G3DSA:3.90.640.10 239 312 7.6E-8 T 11-11-2016 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Gene3D G3DSA:3.30.30.30 70 114 1.4E-8 T 11-11-2016 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Gene3D G3DSA:2.60.34.10 390 530 5.9E-53 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Gene3D G3DSA:3.30.420.40 132 205 1.5E-51 T 11-11-2016 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Gene3D G3DSA:3.30.420.40 20 69 1.5E-51 T 11-11-2016 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Gene3D G3DSA:3.30.420.40 317 359 6.1E-31 T 11-11-2016 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Gene3D G3DSA:3.30.420.40 206 238 6.1E-31 T 11-11-2016 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 1.4E-261 T 11-11-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 Pfam PF00012 Hsp70 protein 21 603 3.8E-185 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 S40542_RS04215 cd8b942ff0a23a73b8e20058ed23b35a 620 SUPERFAMILY SSF53067 19 196 6.48E-48 T 11-11-2016 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.448 T 11-11-2016 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 PRINTS PR00124 ATP synthase C subunit signature 49 74 3.1E-7 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 PRINTS PR00124 ATP synthase C subunit signature 11 30 3.1E-7 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 PRINTS PR00124 ATP synthase C subunit signature 32 47 3.1E-7 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 Pfam PF00137 ATP synthase subunit C 10 73 3.6E-11 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 SUPERFAMILY SSF81333 2 76 6.41E-19 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 Gene3D G3DSA:1.20.20.10 2 76 3.0E-31 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 5.9E-28 T 11-11-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 S40542_RS20720 9eb7397900cd8bed99b2a68952f750cd 77 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-11-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 167 176 - T 11-11-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 Gene3D G3DSA:2.30.30.30 123 182 1.9E-29 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 12 183 1.1E-66 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 Gene3D G3DSA:3.30.70.940 11 121 3.4E-42 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 Pfam PF00467 KOW motif 133 166 3.5E-9 T 11-11-2016 IPR005824 KOW S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 SUPERFAMILY SSF82679 10 121 3.01E-38 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 SUPERFAMILY SSF50104 129 182 2.36E-18 T 11-11-2016 IPR008991 Translation protein SH3-like domain S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 Pfam PF02357 Transcription termination factor nusG 11 115 1.2E-27 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 9 184 24.297 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 SMART SM00738 9 118 7.4E-45 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 SMART SM00739 130 157 9.9E-8 T 11-11-2016 IPR005824 KOW S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 PRINTS PR00338 Transcription termination factor NUSG signature 160 176 3.9E-20 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 PRINTS PR00338 Transcription termination factor NUSG signature 142 157 3.9E-20 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 S40542_RS19560 893e02f7725ef5bcbb4c203e3336a08b 185 PRINTS PR00338 Transcription termination factor NUSG signature 64 76 3.9E-20 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 S40542_RS17535 073ac71c68ed3fc023428d17b6328ae5 237 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 105 229 9.2E-41 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 S40542_RS17535 073ac71c68ed3fc023428d17b6328ae5 237 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 234 20.712 T 11-11-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 S40542_RS17535 073ac71c68ed3fc023428d17b6328ae5 237 SUPERFAMILY SSF64383 101 235 5.49E-43 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 S40542_RS17535 073ac71c68ed3fc023428d17b6328ae5 237 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 106 233 6.0E-60 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 S40542_RS17535 073ac71c68ed3fc023428d17b6328ae5 237 SMART SM00771 102 232 9.7E-41 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 S40542_RS17535 073ac71c68ed3fc023428d17b6328ae5 237 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 66 232 2.4E-36 T 11-11-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 S40542_RS17535 073ac71c68ed3fc023428d17b6328ae5 237 Gene3D G3DSA:3.30.1400.10 101 236 1.2E-45 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 S40542_RS17250 cee8a2172537f4f32fcff802fc3acd98 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 114 232 5.3E-8 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS17250 cee8a2172537f4f32fcff802fc3acd98 272 SUPERFAMILY SSF53850 14 235 1.33E-12 T 11-11-2016 S40542_RS05690 82a73cb255aec1b20cf5ca5a0bd7c133 207 PIRSF PIRSF006158 27 207 2.1E-46 T 11-11-2016 IPR016476 SH3 domain protein S40542_RS05690 82a73cb255aec1b20cf5ca5a0bd7c133 207 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 41 206 1.4E-40 T 11-11-2016 IPR016476 SH3 domain protein S40542_RS05690 82a73cb255aec1b20cf5ca5a0bd7c133 207 Pfam PF08239 Bacterial SH3 domain 48 98 6.4E-11 T 11-11-2016 IPR003646 SH3-like domain, bacterial-type S40542_RS05690 82a73cb255aec1b20cf5ca5a0bd7c133 207 SMART SM00287 37 101 1.6E-4 T 11-11-2016 IPR003646 SH3-like domain, bacterial-type S40542_RS19110 2fc67a603205b3849f8cfd74aaf28f80 670 Pfam PF08308 PEGA domain 340 401 1.6E-12 T 11-11-2016 IPR013229 PEGA S40542_RS19110 2fc67a603205b3849f8cfd74aaf28f80 670 SUPERFAMILY SSF56436 433 669 4.0E-67 T 11-11-2016 IPR016187 C-type lectin fold S40542_RS19110 2fc67a603205b3849f8cfd74aaf28f80 670 Pfam PF03781 Sulfatase-modifying factor enzyme 1 436 668 5.7E-58 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 S40542_RS19110 2fc67a603205b3849f8cfd74aaf28f80 670 Gene3D G3DSA:3.90.1580.10 431 669 1.5E-63 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 SUPERFAMILY SSF55874 1139 1287 8.64E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 SUPERFAMILY SSF55781 854 1039 6.54E-25 T 11-11-2016 IPR029016 GAF domain-like S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 SMART SM00387 1176 1289 6.5E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Pfam PF13185 GAF domain 873 1012 2.0E-12 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Pfam PF07494 Two component regulator propeller 58 77 0.003 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Gene3D G3DSA:3.30.565.10 1139 1287 6.6E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 SUPERFAMILY SSF63829 58 217 8.34E-9 T 11-11-2016 S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 SMART SM00065 872 1022 9.0E-10 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Gene3D G3DSA:3.30.450.40 851 1023 2.8E-23 T 11-11-2016 IPR029016 GAF domain-like S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Gene3D G3DSA:2.120.10.30 310 416 2.1E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Gene3D G3DSA:2.120.10.30 48 137 6.8E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Pfam PF07495 Y_Y_Y domain 743 800 8.0E-18 T 11-11-2016 IPR011123 Two component regulator three Y S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Gene3D G3DSA:2.120.10.30 457 572 1.4E-9 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1179 1288 2.8E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 SUPERFAMILY SSF50998 207 597 6.02E-18 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1217 1231 1.4E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1235 1245 1.4E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1248 1266 1.4E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16265 aa3094405e0a0d59dae2f67ce54c687f 1289 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1273 1286 1.4E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 21 510 29.782 T 11-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 37 157 1.1E-10 T 11-11-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 SUPERFAMILY SSF52949 26 178 3.12E-12 T 11-11-2016 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 SUPERFAMILY SSF53187 189 507 5.65E-102 T 11-11-2016 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 Gene3D G3DSA:3.40.220.10 23 165 1.6E-14 T 11-11-2016 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 356 363 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 194 501 1.2E-101 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 PRINTS PR00481 Cytosol aminopeptidase signature 271 288 2.4E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 PRINTS PR00481 Cytosol aminopeptidase signature 352 372 2.4E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 PRINTS PR00481 Cytosol aminopeptidase signature 293 314 2.4E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 PRINTS PR00481 Cytosol aminopeptidase signature 330 351 2.4E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 PRINTS PR00481 Cytosol aminopeptidase signature 381 396 2.4E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS12585 6ff792d902cffd2d9ec941c689003b6b 510 Gene3D G3DSA:3.40.630.10 189 507 1.0E-112 T 11-11-2016 S40542_RS05745 fed23cc5d24b1fd853b4655870baa7cf 751 Gene3D G3DSA:2.60.450.10 47 193 1.2E-7 T 11-11-2016 S40542_RS05745 fed23cc5d24b1fd853b4655870baa7cf 751 Pfam PF04453 Organic solvent tolerance protein 288 657 2.6E-87 T 11-11-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 S40542_RS05745 fed23cc5d24b1fd853b4655870baa7cf 751 Pfam PF03968 OstA-like protein 50 180 2.6E-8 T 11-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal S40542_RS05745 fed23cc5d24b1fd853b4655870baa7cf 751 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 726 19.932 T 11-11-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.2E-49 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 SUPERFAMILY SSF56420 2 164 6.41E-57 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.893 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 PRINTS PR01576 Peptide deformylase signature 89 100 1.8E-30 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 PRINTS PR01576 Peptide deformylase signature 101 119 1.8E-30 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 PRINTS PR01576 Peptide deformylase signature 33 62 1.8E-30 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 PRINTS PR01576 Peptide deformylase signature 120 149 1.8E-30 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 PIRSF PIRSF004749 1 167 2.5E-53 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 Pfam PF01327 Polypeptide deformylase 4 152 1.2E-49 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS10090 9fe83c8905591bd5dea2d4966708745f 167 Gene3D G3DSA:3.90.45.10 3 164 4.1E-58 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-11-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 5.6E-50 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 Gene3D G3DSA:1.10.520.20 2 105 1.7E-33 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.1E-54 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.2E-26 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.2E-26 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.2E-26 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.2E-26 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.2E-26 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 SUPERFAMILY SSF47928 3 105 8.5E-27 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 S40542_RS20710 1c54c1abdb22c9165cff7b54b890b3c3 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.91 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 Pfam PF01938 TRAM domain 13 65 1.8E-8 T 11-11-2016 IPR002792 TRAM domain S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 Gene3D G3DSA:2.40.50.140 3 87 4.8E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 419 429 - T 11-11-2016 IPR030391 RNA methyltransferase TrmA, conserved site S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 Gene3D G3DSA:3.40.50.150 228 436 1.0E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 368 398 - T 11-11-2016 IPR030390 RNA methyltransferase TrmA, active site S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 99 436 2.7E-32 T 11-11-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 SUPERFAMILY SSF50249 7 66 2.11E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 255 429 3.3E-61 T 11-11-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 S40542_RS16790 6415ba74948dbccb3fc09a86f7b6bb6c 437 SUPERFAMILY SSF53335 76 436 3.26E-66 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Gene3D G3DSA:3.40.50.300 244 330 6.1E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Gene3D G3DSA:3.40.50.300 3 110 6.1E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 SMART SM00382 49 331 2.7E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 SMART SM01086 334 428 9.4E-22 T 11-11-2016 IPR019489 Clp ATPase, C-terminal S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 442 43.384 T 11-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 404 1.9E-7 T 11-11-2016 IPR019489 Clp ATPase, C-terminal S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 9.2E-223 T 11-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Gene3D G3DSA:1.10.8.60 334 442 6.8E-36 T 11-11-2016 S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 99 1.5E-6 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 SUPERFAMILY SSF52540 4 440 1.3E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 185 328 3.2E-41 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Gene3D G3DSA:1.10.8.10 212 242 4.5E-33 T 11-11-2016 S40542_RS01300 6b335aaf2e1efa77b02774f2934803ac 442 Gene3D G3DSA:1.10.8.10 111 176 4.5E-33 T 11-11-2016 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Gene3D G3DSA:3.30.1360.120 2 121 1.6E-41 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Pfam PF01926 50S ribosome-binding GTPase 218 310 1.5E-23 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 2.1E-102 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 1.1E-34 T 11-11-2016 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 6.3E-21 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 SUPERFAMILY SSF52540 72 152 1.17E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 SUPERFAMILY SSF52540 188 372 1.17E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 SUPERFAMILY SSF116878 379 454 1.07E-52 T 11-11-2016 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 SUPERFAMILY SSF116878 121 220 1.07E-52 T 11-11-2016 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Pfam PF12631 MnmE helical domain 123 451 1.2E-60 T 11-11-2016 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 32.613 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Gene3D G3DSA:3.40.50.300 195 246 1.1E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Gene3D G3DSA:1.20.120.430 122 182 2.5E-59 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Gene3D G3DSA:1.20.120.430 247 271 2.5E-59 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Gene3D G3DSA:1.20.120.430 384 454 2.5E-59 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 S40542_RS20760 48f296e2e9410128e8d05a8e9cc76871 454 Gene3D G3DSA:3.40.50.300 286 375 1.6E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05085 a6ec909337e1630b71105636e0dd1f6a 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 11-11-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 S40542_RS05085 a6ec909337e1630b71105636e0dd1f6a 316 Hamap MF_00492 Transaldolase [tal]. 2 316 46.656 T 11-11-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 S40542_RS05085 a6ec909337e1630b71105636e0dd1f6a 316 Pfam PF00923 Transaldolase 14 312 4.1E-96 T 11-11-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 S40542_RS05085 a6ec909337e1630b71105636e0dd1f6a 316 TIGRFAM TIGR00874 talAB: transaldolase 4 314 4.0E-138 T 11-11-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 S40542_RS05085 a6ec909337e1630b71105636e0dd1f6a 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 11-11-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 S40542_RS05085 a6ec909337e1630b71105636e0dd1f6a 316 SUPERFAMILY SSF51569 1 315 4.19E-109 T 11-11-2016 S40542_RS05085 a6ec909337e1630b71105636e0dd1f6a 316 Gene3D G3DSA:3.20.20.70 2 314 3.1E-121 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS09895 e5ba3bfeb730462eef5e04b475ebfc16 364 SUPERFAMILY SSF51905 5 173 1.25E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09895 e5ba3bfeb730462eef5e04b475ebfc16 364 SUPERFAMILY SSF51905 266 352 1.25E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09895 e5ba3bfeb730462eef5e04b475ebfc16 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 2.8E-7 T 11-11-2016 S40542_RS09895 e5ba3bfeb730462eef5e04b475ebfc16 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.8E-7 T 11-11-2016 S40542_RS09895 e5ba3bfeb730462eef5e04b475ebfc16 364 Gene3D G3DSA:3.50.50.60 6 178 2.2E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09895 e5ba3bfeb730462eef5e04b475ebfc16 364 Gene3D G3DSA:3.50.50.60 267 339 2.2E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09895 e5ba3bfeb730462eef5e04b475ebfc16 364 Pfam PF01494 FAD binding domain 6 323 1.4E-18 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 S40542_RS14860 f9ebfb200ee9b871591236649c93bd00 108 Gene3D G3DSA:3.30.1310.10 3 108 1.1E-46 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family S40542_RS14860 f9ebfb200ee9b871591236649c93bd00 108 PIRSF PIRSF004555 3 108 3.0E-37 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family S40542_RS14860 f9ebfb200ee9b871591236649c93bd00 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 2.0E-35 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family S40542_RS14860 f9ebfb200ee9b871591236649c93bd00 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 22.139 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family S40542_RS14860 f9ebfb200ee9b871591236649c93bd00 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 99 6.8E-33 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family S40542_RS14860 f9ebfb200ee9b871591236649c93bd00 108 SUPERFAMILY SSF82607 10 102 8.63E-34 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family S40542_RS16410 624bd06b27a1ef8acbea98b0f503dace 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 1 168 3.5E-41 T 11-11-2016 IPR006498 Tail tube protein S40542_RS16410 624bd06b27a1ef8acbea98b0f503dace 169 Pfam PF04985 Phage tail tube protein FII 3 168 1.6E-43 T 11-11-2016 IPR006498 Tail tube protein S40542_RS08660 c5fb13a4beb36b0b4d203e0d189b2313 183 Pfam PF03358 NADPH-dependent FMN reductase 10 112 1.2E-7 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 S40542_RS08660 c5fb13a4beb36b0b4d203e0d189b2313 183 SUPERFAMILY SSF52218 1 182 6.03E-51 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS08660 c5fb13a4beb36b0b4d203e0d189b2313 183 Gene3D G3DSA:3.40.50.360 1 182 5.6E-57 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS12230 920e5222ea47debe7e60e39fcd63f11d 758 Gene3D G3DSA:3.30.450.20 225 265 6.9E-5 T 11-11-2016 S40542_RS12230 920e5222ea47debe7e60e39fcd63f11d 758 Gene3D G3DSA:3.20.20.450 514 749 3.3E-67 T 11-11-2016 IPR001633 EAL domain S40542_RS12230 920e5222ea47debe7e60e39fcd63f11d 758 SUPERFAMILY SSF55073 353 487 4.39E-5 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS12230 920e5222ea47debe7e60e39fcd63f11d 758 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 487 1.8E-5 T 11-11-2016 IPR000160 GGDEF domain S40542_RS12230 920e5222ea47debe7e60e39fcd63f11d 758 Gene3D G3DSA:3.30.70.270 349 487 2.6E-7 T 11-11-2016 S40542_RS12230 920e5222ea47debe7e60e39fcd63f11d 758 SMART SM00052 509 748 6.3E-66 T 11-11-2016 IPR001633 EAL domain S40542_RS12230 920e5222ea47debe7e60e39fcd63f11d 758 SUPERFAMILY SSF141868 517 749 1.44E-63 T 11-11-2016 IPR001633 EAL domain S40542_RS12230 920e5222ea47debe7e60e39fcd63f11d 758 Pfam PF00563 EAL domain 518 743 5.9E-58 T 11-11-2016 IPR001633 EAL domain S40542_RS14015 1c7d4ad01d345cb7362fe5d23004386d 137 Pfam PF00717 Peptidase S24-like 46 107 4.1E-8 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B S40542_RS14015 1c7d4ad01d345cb7362fe5d23004386d 137 SUPERFAMILY SSF51306 21 124 2.44E-23 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C S40542_RS14015 1c7d4ad01d345cb7362fe5d23004386d 137 Gene3D G3DSA:2.10.109.10 14 127 5.8E-32 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain S40542_RS19770 729117eaf43e616bc964305ffe162d61 695 SUPERFAMILY SSF56935 23 695 6.8E-94 T 11-11-2016 S40542_RS19770 729117eaf43e616bc964305ffe162d61 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 153 1.0E-10 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS19770 729117eaf43e616bc964305ffe162d61 695 Pfam PF00593 TonB dependent receptor 467 694 7.7E-20 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS19770 729117eaf43e616bc964305ffe162d61 695 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 695 3.5E-77 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 S40542_RS19770 729117eaf43e616bc964305ffe162d61 695 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 678 695 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site S40542_RS19770 729117eaf43e616bc964305ffe162d61 695 Gene3D G3DSA:2.170.130.10 45 161 1.1E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS19770 729117eaf43e616bc964305ffe162d61 695 Gene3D G3DSA:2.40.170.20 168 695 2.2E-92 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Gene3D G3DSA:2.10.10.20 484 533 3.2E-16 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Gene3D G3DSA:2.10.10.20 349 397 5.7E-14 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Pfam PF02839 Carbohydrate binding domain 488 529 2.2E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Pfam PF02839 Carbohydrate binding domain 353 391 6.3E-10 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Gene3D G3DSA:2.60.40.670 266 347 1.9E-19 T 11-11-2016 IPR000601 PKD domain S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Gene3D G3DSA:2.60.40.670 404 478 4.4E-20 T 11-11-2016 IPR000601 PKD domain S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SMART SM00089 406 480 6.3E-16 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SMART SM00089 269 347 1.8E-16 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 206 218 6.0E-15 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 115 129 6.0E-15 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 56 71 6.0E-15 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Gene3D G3DSA:2.40.10.10 30 63 1.2E-16 T 11-11-2016 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SUPERFAMILY SSF49299 266 348 4.97E-18 T 11-11-2016 IPR000601 PKD domain S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SMART SM00020 29 253 8.3E-71 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 207 218 - T 11-11-2016 IPR033116 Serine proteases, trypsin family, serine active site S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Gene3D G3DSA:2.40.10.10 64 257 1.8E-54 T 11-11-2016 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Pfam PF00089 Trypsin 30 253 4.2E-57 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SUPERFAMILY SSF51055 346 398 5.23E-10 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SUPERFAMILY SSF50494 15 258 1.59E-71 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SUPERFAMILY SSF49299 404 479 9.94E-19 T 11-11-2016 IPR000601 PKD domain S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Pfam PF00801 PKD domain 409 469 1.5E-10 T 11-11-2016 IPR000601 PKD domain S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 Pfam PF00801 PKD domain 274 336 2.2E-11 T 11-11-2016 IPR000601 PKD domain S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SUPERFAMILY SSF51055 483 535 5.36E-14 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 66 71 - T 11-11-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SMART SM00495 487 532 2.0E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS09540 568eff6e50b5ac31b308121ce10619b9 536 SMART SM00495 351 394 2.0E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS09705 596c480775dad74115a56ec12ccb6942 284 SUPERFAMILY SSF56112 17 271 2.21E-25 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS09705 596c480775dad74115a56ec12ccb6942 284 Gene3D G3DSA:3.90.1200.10 96 247 9.0E-7 T 11-11-2016 S40542_RS09705 596c480775dad74115a56ec12ccb6942 284 PIRSF PIRSF006221 1 284 1.7E-69 T 11-11-2016 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 S40542_RS09705 596c480775dad74115a56ec12ccb6942 284 Pfam PF03881 Fructosamine kinase 1 284 8.8E-81 T 11-11-2016 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 S40542_RS01350 c62c593c1dc9a9afd5d19e3eb45497c5 359 Gene3D G3DSA:3.30.420.40 11 102 2.5E-11 T 11-11-2016 S40542_RS01350 c62c593c1dc9a9afd5d19e3eb45497c5 359 Pfam PF11104 Type IV pilus assembly protein PilM; 15 354 5.0E-135 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM S40542_RS01350 c62c593c1dc9a9afd5d19e3eb45497c5 359 SMART SM00842 13 180 5.1E-4 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 S40542_RS01350 c62c593c1dc9a9afd5d19e3eb45497c5 359 PIRSF PIRSF019169 2 355 1.1E-114 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM S40542_RS01350 c62c593c1dc9a9afd5d19e3eb45497c5 359 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 354 2.3E-103 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM S40542_RS01350 c62c593c1dc9a9afd5d19e3eb45497c5 359 SUPERFAMILY SSF53067 193 354 5.62E-25 T 11-11-2016 S40542_RS01350 c62c593c1dc9a9afd5d19e3eb45497c5 359 Gene3D G3DSA:3.30.420.40 197 314 2.1E-23 T 11-11-2016 S40542_RS01350 c62c593c1dc9a9afd5d19e3eb45497c5 359 SUPERFAMILY SSF53067 12 180 2.02E-12 T 11-11-2016 S40542_RS12065 2fb9e5d9eb2632598e759384eb87d553 137 PIRSF PIRSF000178 3 136 2.7E-28 T 11-11-2016 S40542_RS12065 2fb9e5d9eb2632598e759384eb87d553 137 Gene3D G3DSA:1.20.1300.10 13 136 5.1E-38 T 11-11-2016 S40542_RS12065 2fb9e5d9eb2632598e759384eb87d553 137 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 15 134 4.9E-41 T 11-11-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12065 2fb9e5d9eb2632598e759384eb87d553 137 SUPERFAMILY SSF81343 13 136 6.76E-33 T 11-11-2016 S40542_RS12065 2fb9e5d9eb2632598e759384eb87d553 137 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 14 130 6.9E-30 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 SUPERFAMILY SSF58104 560 841 9.68E-76 T 11-11-2016 S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 Gene3D G3DSA:1.10.287.950 608 812 5.6E-64 T 11-11-2016 S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 Gene3D G3DSA:3.30.450.20 372 487 2.2E-4 T 11-11-2016 S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 652 839 9.2E-62 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 SMART SM00283 593 840 1.8E-95 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 Gene3D G3DSA:3.30.450.20 246 361 9.8E-5 T 11-11-2016 S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 Pfam PF13426 PAS domain 131 233 0.18 T 11-11-2016 IPR000014 PAS domain S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 Pfam PF13426 PAS domain 262 364 0.011 T 11-11-2016 IPR000014 PAS domain S40542_RS01970 d2b13b12cfe9b9be800fc528c3f8726d 909 Pfam PF13426 PAS domain 394 495 0.075 T 11-11-2016 IPR000014 PAS domain S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 SMART SM00487 28 233 5.6E-53 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 SUPERFAMILY SSF52540 83 364 7.8E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 162 170 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 388 49.855 T 11-11-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 Pfam PF00271 Helicase conserved C-terminal domain 242 350 7.4E-29 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.9E-45 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 SMART SM00490 269 350 7.3E-33 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 Gene3D G3DSA:3.40.50.300 223 379 2.6E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20030 9879bfb2be3f1b4ac890cd219eaac9f1 427 Gene3D G3DSA:3.40.50.300 8 222 4.6E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05070 260bc4f81b0abb79a22cd38a9a3eb115 219 SMART SM00987 46 207 9.4E-43 T 11-11-2016 S40542_RS05070 260bc4f81b0abb79a22cd38a9a3eb115 219 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 54 63 - T 11-11-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 S40542_RS05070 260bc4f81b0abb79a22cd38a9a3eb115 219 SMART SM00986 46 207 9.4E-43 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 S40542_RS05070 260bc4f81b0abb79a22cd38a9a3eb115 219 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 218 38.714 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 S40542_RS05070 260bc4f81b0abb79a22cd38a9a3eb115 219 Gene3D G3DSA:3.40.470.10 3 219 1.3E-97 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 S40542_RS05070 260bc4f81b0abb79a22cd38a9a3eb115 219 Pfam PF03167 Uracil DNA glycosylase superfamily 51 206 8.2E-25 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 S40542_RS05070 260bc4f81b0abb79a22cd38a9a3eb115 219 SUPERFAMILY SSF52141 3 219 8.07E-93 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 S40542_RS05070 260bc4f81b0abb79a22cd38a9a3eb115 219 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 3 211 5.4E-84 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 SUPERFAMILY SSF51246 331 444 2.35E-42 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.7E-37 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.8E-85 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 SUPERFAMILY SSF56059 83 345 1.23E-70 T 11-11-2016 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 2.2E-239 T 11-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 SMART SM00878 336 441 4.6E-63 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 Gene3D G3DSA:3.30.1490.20 130 203 4.8E-29 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 Gene3D G3DSA:3.30.470.20 204 444 2.1E-101 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 Gene3D G3DSA:3.40.50.20 1 129 3.1E-49 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 SUPERFAMILY SSF52440 1 113 5.11E-45 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS01825 80e8de97b49c1e03bce02adcd4adc12e 446 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.3E-43 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 SUPERFAMILY SSF47384 133 209 8.44E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 Gene3D G3DSA:1.10.287.130 140 206 1.4E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 254 358 4.8E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 Gene3D G3DSA:3.30.565.10 214 362 6.0E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 Gene3D G3DSA:3.30.450.20 33 115 5.7E-8 T 11-11-2016 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 SMART SM00388 144 210 1.5E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 SUPERFAMILY SSF55874 199 360 3.27E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 SMART SM00091 38 101 5.0E-4 T 11-11-2016 IPR000014 PAS domain S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 Pfam PF13188 PAS domain 40 82 2.9E-4 T 11-11-2016 IPR000014 PAS domain S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 SMART SM00387 253 360 1.3E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 SUPERFAMILY SSF55785 32 118 7.33E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 305 3.3E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 338 3.3E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 319 3.3E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 357 3.3E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06355 874e59c35bf67d6abcbfb8af2ec50b15 368 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 209 8.9E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 1.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 SUPERFAMILY SSF82714 185 267 8.63E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 SUPERFAMILY SSF82693 41 135 1.49E-16 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 Gene3D G3DSA:1.20.1640.10 293 505 1.8E-41 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 SUPERFAMILY SSF82866 892 1084 1.44E-33 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 Gene3D G3DSA:3.30.70.1430 42 141 5.4E-17 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 Gene3D G3DSA:1.10.3850.10 837 1084 2.6E-59 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 Gene3D G3DSA:3.30.70.1430 569 676 7.6E-5 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 SUPERFAMILY SSF82866 298 502 4.45E-36 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 Gene3D G3DSA:3.30.2090.10 184 267 3.3E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 SUPERFAMILY SSF82693 564 677 1.88E-7 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 SUPERFAMILY SSF82693 143 184 1.2E-7 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 SUPERFAMILY SSF82693 272 330 1.2E-7 T 11-11-2016 S40542_RS00845 8dc1a5b25b6eac52110521071648e890 1097 Pfam PF00873 AcrB/AcrD/AcrF family 17 1082 8.5E-135 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 SMART SM00863 644 687 7.8E-22 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 SUPERFAMILY SSF55681 4 247 3.73E-111 T 11-11-2016 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 Pfam PF01411 tRNA synthetases class II (A) 8 547 2.0E-227 T 11-11-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 866 201.693 T 11-11-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 SUPERFAMILY SSF55186 543 701 1.24E-51 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 SUPERFAMILY SSF101353 248 457 1.44E-61 T 11-11-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 845 0.0 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 Pfam PF02272 DHHA1 domain 792 857 3.3E-16 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 Gene3D G3DSA:3.30.930.10 4 244 5.4E-121 T 11-11-2016 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 SUPERFAMILY SSF50447 448 543 1.94E-17 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 PRINTS PR00980 Alanyl-tRNA synthetase signature 228 241 5.4E-33 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 PRINTS PR00980 Alanyl-tRNA synthetase signature 77 88 5.4E-33 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 5.4E-33 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 PRINTS PR00980 Alanyl-tRNA synthetase signature 201 212 5.4E-33 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 5.4E-33 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 S40542_RS05255 78ee9148849e6bbd8c84d54f046f3691 867 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 644 687 9.3E-19 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 S40542_RS09980 f4fadd83dc2eb8eead17122733739e19 382 Gene3D G3DSA:3.40.50.2300 261 381 6.6E-37 T 11-11-2016 S40542_RS09980 f4fadd83dc2eb8eead17122733739e19 382 SMART SM00448 263 376 1.3E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09980 f4fadd83dc2eb8eead17122733739e19 382 Pfam PF00072 Response regulator receiver domain 265 373 1.1E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09980 f4fadd83dc2eb8eead17122733739e19 382 SUPERFAMILY SSF52172 262 381 7.83E-35 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS04875 25cfe21586cc9b749ecbda65dfb8d96a 217 Gene3D G3DSA:3.30.70.260 140 196 3.2E-30 T 11-11-2016 S40542_RS04875 25cfe21586cc9b749ecbda65dfb8d96a 217 Gene3D G3DSA:3.40.50.1360 4 139 5.4E-60 T 11-11-2016 S40542_RS04875 25cfe21586cc9b749ecbda65dfb8d96a 217 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 213 2.0E-71 T 11-11-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 S40542_RS04875 25cfe21586cc9b749ecbda65dfb8d96a 217 SUPERFAMILY SSF75445 127 198 1.7E-24 T 11-11-2016 S40542_RS04875 25cfe21586cc9b749ecbda65dfb8d96a 217 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.664 T 11-11-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 S40542_RS04875 25cfe21586cc9b749ecbda65dfb8d96a 217 SUPERFAMILY SSF100950 1 146 2.51E-48 T 11-11-2016 S40542_RS04875 25cfe21586cc9b749ecbda65dfb8d96a 217 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.2E-60 T 11-11-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 S40542_RS02940 5738c7dcd13a83903b6da2f268faa2f1 454 Pfam PF00144 Beta-lactamase 43 344 1.1E-67 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS02940 5738c7dcd13a83903b6da2f268faa2f1 454 SUPERFAMILY SSF56601 35 357 5.28E-85 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS02940 5738c7dcd13a83903b6da2f268faa2f1 454 Gene3D G3DSA:3.40.710.10 44 360 4.0E-93 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS18185 900a3c6722e5d79ebc07d6122f71c386 233 SUPERFAMILY SSF109755 12 230 1.36E-70 T 11-11-2016 S40542_RS18185 900a3c6722e5d79ebc07d6122f71c386 233 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 12 221 4.5E-75 T 11-11-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 S40542_RS18185 900a3c6722e5d79ebc07d6122f71c386 233 Gene3D G3DSA:1.20.58.220 117 228 1.9E-33 T 11-11-2016 S40542_RS18185 900a3c6722e5d79ebc07d6122f71c386 233 Gene3D G3DSA:1.20.58.220 8 116 3.3E-36 T 11-11-2016 S40542_RS18185 900a3c6722e5d79ebc07d6122f71c386 233 Pfam PF01895 PhoU domain 128 212 5.7E-19 T 11-11-2016 IPR026022 PhoU domain S40542_RS18185 900a3c6722e5d79ebc07d6122f71c386 233 Pfam PF01895 PhoU domain 25 111 6.0E-22 T 11-11-2016 IPR026022 PhoU domain S40542_RS18185 900a3c6722e5d79ebc07d6122f71c386 233 PIRSF PIRSF003107 6 226 8.2E-68 T 11-11-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 S40542_RS14280 bef31cc3b1fe157ac5400797daa59bdd 197 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 191 6.5E-32 T 11-11-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial S40542_RS14280 bef31cc3b1fe157ac5400797daa59bdd 197 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 1.8E-26 T 11-11-2016 S40542_RS14280 bef31cc3b1fe157ac5400797daa59bdd 197 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 185 9.0E-25 T 11-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 S40542_RS14280 bef31cc3b1fe157ac5400797daa59bdd 197 Gene3D G3DSA:3.40.50.1000 76 190 4.2E-25 T 11-11-2016 IPR023214 HAD-like domain S40542_RS14280 bef31cc3b1fe157ac5400797daa59bdd 197 SUPERFAMILY SSF56784 2 187 2.86E-22 T 11-11-2016 IPR023214 HAD-like domain S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 SUPERFAMILY SSF51735 131 315 6.66E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 3.8E-51 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 Gene3D G3DSA:3.30.360.10 301 459 1.6E-58 T 11-11-2016 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 133 466 4.0E-115 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 292 4.2E-38 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 SMART SM00846 131 292 7.4E-51 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 Gene3D G3DSA:3.40.50.720 132 300 1.7E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 1.0E-18 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 1.0E-18 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 1.0E-18 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 1.0E-18 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS14325 454d55a2ce7144399360ffc61767c2e3 480 SUPERFAMILY SSF55347 292 455 2.59E-56 T 11-11-2016 S40542_RS05650 bb06535a9fa1784568bb085f760a72e1 209 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 4 207 2.7E-54 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 S40542_RS05650 bb06535a9fa1784568bb085f760a72e1 209 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 2 65 2.8E-12 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS05650 bb06535a9fa1784568bb085f760a72e1 209 Pfam PF01467 Cytidylyltransferase-like 4 147 2.2E-30 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS05650 bb06535a9fa1784568bb085f760a72e1 209 SUPERFAMILY SSF52374 1 207 6.82E-53 T 11-11-2016 S40542_RS05650 bb06535a9fa1784568bb085f760a72e1 209 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 208 26.431 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 S40542_RS05650 bb06535a9fa1784568bb085f760a72e1 209 Gene3D G3DSA:3.40.50.620 2 207 3.1E-67 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 SUPERFAMILY SSF75615 114 209 1.7E-26 T 11-11-2016 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 427 2.3E-50 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 3.8E-8 T 11-11-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 1.1E-74 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 4.1E-20 T 11-11-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 SUPERFAMILY SSF53790 210 458 1.83E-82 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Gene3D G3DSA:3.40.1010.10 214 330 7.7E-47 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 SUPERFAMILY SSF51735 2 113 1.23E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Gene3D G3DSA:3.40.50.720 2 112 2.0E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Pfam PF13241 Putative NAD(P)-binding 6 115 1.8E-30 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Gene3D G3DSA:3.30.950.10 331 459 6.0E-51 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Gene3D G3DSA:1.10.8.210 149 210 1.2E-21 T 11-11-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 450 1.1E-94 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 459 52.029 T 11-11-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 PIRSF PIRSF036426 1 467 4.6E-204 T 11-11-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 S40542_RS19580 80a33a2db3e59c93e2fbd7cd6c720e84 473 Gene3D G3DSA:3.30.160.110 113 148 3.4E-19 T 11-11-2016 S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 Gene3D G3DSA:3.10.350.10 333 378 1.5E-15 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 Gene3D G3DSA:3.10.350.10 405 451 9.1E-17 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 Gene3D G3DSA:3.10.350.10 467 513 5.7E-19 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 SMART SM00257 406 450 4.4E-14 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 SMART SM00257 335 378 2.7E-14 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 SMART SM00257 469 513 9.2E-15 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 Pfam PF01476 LysM domain 407 449 3.2E-13 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 Pfam PF01476 LysM domain 470 512 9.5E-13 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 Pfam PF01476 LysM domain 336 378 1.3E-11 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 Gene3D G3DSA:1.10.530.10 99 255 2.5E-44 T 11-11-2016 S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 124 152 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 Pfam PF01464 Transglycosylase SLT domain 107 215 2.8E-23 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 SUPERFAMILY SSF54106 405 450 8.5E-11 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 SUPERFAMILY SSF53955 102 254 1.22E-41 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 SUPERFAMILY SSF54106 333 378 8.37E-11 T 11-11-2016 IPR018392 LysM domain S40542_RS17185 d94f8ccc3022dcdd68f6af6f749cefe1 519 SUPERFAMILY SSF54106 467 513 2.62E-11 T 11-11-2016 IPR018392 LysM domain S40542_RS16405 06da08fbc8e7861e5ffa85f9de3bae9f 85 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 79 2.3E-16 T 11-11-2016 IPR019289 Bacteriophage tail protein Gp41, putative S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:2.40.270.10 793 820 1.1E-86 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:2.40.270.10 1060 1241 1.1E-86 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 11-11-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 SUPERFAMILY SSF64484 343 939 0.0 T 11-11-2016 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 SUPERFAMILY SSF64484 1039 1339 0.0 T 11-11-2016 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 SUPERFAMILY SSF64484 12 225 0.0 T 11-11-2016 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 3.8E-24 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 2.2E-27 T 11-11-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.228 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:3.90.1110.10 152 229 1.0E-64 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:3.90.1110.10 346 444 1.0E-64 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 150 222 2.5E-5 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 350 454 4.2E-15 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:2.40.50.100 715 792 3.4E-29 T 11-11-2016 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 4.3E-29 T 11-11-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:2.40.50.150 1045 1059 3.7E-56 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:2.40.50.150 828 937 3.7E-56 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 2.8E-157 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Pfam PF04563 RNA polymerase beta subunit 27 500 7.3E-52 T 11-11-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:2.30.150.10 592 656 4.1E-28 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:3.90.1100.10 659 713 8.6E-145 T 11-11-2016 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:3.90.1100.10 445 591 8.6E-145 T 11-11-2016 S40542_RS19535 c73bd70c51269ac4ec82950a143af3b8 1341 Gene3D G3DSA:3.90.1100.10 20 150 8.6E-145 T 11-11-2016 S40542_RS12905 7c0e01e47fdb09a6f7808614b710c29f 192 Gene3D G3DSA:2.30.110.10 2 192 6.8E-53 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS12905 7c0e01e47fdb09a6f7808614b710c29f 192 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 192 1.5E-48 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS12905 7c0e01e47fdb09a6f7808614b710c29f 192 PIRSF PIRSF000190 1 192 9.5E-51 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS12905 7c0e01e47fdb09a6f7808614b710c29f 192 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 21 96 2.0E-13 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS12905 7c0e01e47fdb09a6f7808614b710c29f 192 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 152 192 1.0E-10 T 11-11-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS12905 7c0e01e47fdb09a6f7808614b710c29f 192 SUPERFAMILY SSF50475 1 192 7.65E-42 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS02955 d5e40578b9822934d7c3b74a525267f1 231 Pfam PF12103 Surface lipoprotein of Spirochaetales order 43 215 6.0E-65 T 11-11-2016 IPR021962 Surface lipoprotein of Spirochaetales order S40542_RS17810 12459011ecb1db13b281470ce20619f7 178 Gene3D G3DSA:3.40.630.30 3 171 1.0E-30 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS17810 12459011ecb1db13b281470ce20619f7 178 Pfam PF13673 Acetyltransferase (GNAT) domain 40 148 3.9E-11 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS17810 12459011ecb1db13b281470ce20619f7 178 SUPERFAMILY SSF55729 17 170 5.23E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13420 b32922b56e9996b3362c02a6ce6d3a7a 391 Pfam PF13533 Biotin-lipoyl like 73 118 4.6E-7 T 11-11-2016 S40542_RS13420 b32922b56e9996b3362c02a6ce6d3a7a 391 Pfam PF13437 HlyD family secretion protein 186 294 3.8E-10 T 11-11-2016 S40542_RS13420 b32922b56e9996b3362c02a6ce6d3a7a 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 372 1.4E-42 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS13420 b32922b56e9996b3362c02a6ce6d3a7a 391 SUPERFAMILY SSF111369 58 301 4.18E-23 T 11-11-2016 S40542_RS13420 b32922b56e9996b3362c02a6ce6d3a7a 391 Gene3D G3DSA:2.40.50.100 71 103 2.5E-11 T 11-11-2016 S40542_RS13420 b32922b56e9996b3362c02a6ce6d3a7a 391 Gene3D G3DSA:2.40.50.100 183 214 2.5E-11 T 11-11-2016 S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 Gene3D G3DSA:1.10.8.60 186 258 4.8E-33 T 11-11-2016 S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 2.5E-148 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 1.9E-118 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 5.0E-35 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 SMART SM00382 54 181 9.9E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.8E-34 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 333 181.915 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 Gene3D G3DSA:1.10.10.10 260 330 8.2E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 SUPERFAMILY SSF46785 260 330 4.28E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 SUPERFAMILY SSF52540 23 255 2.35E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14680 947c2f08f04402191d0f7b6258b72e64 333 Gene3D G3DSA:3.40.50.300 23 178 4.9E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00300 bc050cd7d83828da549c79c7564a87fa 163 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS00300 bc050cd7d83828da549c79c7564a87fa 163 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 4 162 12.418 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS00300 bc050cd7d83828da549c79c7564a87fa 163 Pfam PF01252 Signal peptidase (SPase) II 13 153 2.5E-25 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS00300 bc050cd7d83828da549c79c7564a87fa 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 51 59 2.8E-12 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS00300 bc050cd7d83828da549c79c7564a87fa 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 2.8E-12 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS00300 bc050cd7d83828da549c79c7564a87fa 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 2.8E-12 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS00300 bc050cd7d83828da549c79c7564a87fa 163 TIGRFAM TIGR00077 lspA: signal peptidase II 10 160 2.2E-25 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS19415 4cda44aa9bd1a0f5c69e27b7d145d8c4 401 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 200 396 1.3E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS19415 4cda44aa9bd1a0f5c69e27b7d145d8c4 401 SUPERFAMILY SSF58104 93 400 2.35E-52 T 11-11-2016 S40542_RS19415 4cda44aa9bd1a0f5c69e27b7d145d8c4 401 SMART SM00283 140 401 1.1E-32 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS19415 4cda44aa9bd1a0f5c69e27b7d145d8c4 401 Gene3D G3DSA:1.10.287.950 159 368 1.4E-43 T 11-11-2016 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 SUPERFAMILY SSF52425 4 176 1.57E-30 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 Gene3D G3DSA:1.10.579.10 285 423 4.4E-55 T 11-11-2016 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 PRINTS PR00147 DNA photolyase signature 344 362 1.3E-12 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 PRINTS PR00147 DNA photolyase signature 383 397 1.3E-12 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 PRINTS PR00147 DNA photolyase signature 324 340 1.3E-12 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 Gene3D G3DSA:1.25.40.80 152 284 6.8E-33 T 11-11-2016 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 Gene3D G3DSA:3.40.50.620 2 151 7.0E-24 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 SUPERFAMILY SSF48173 203 429 4.84E-69 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 Pfam PF00875 DNA photolyase 4 158 2.4E-25 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 Pfam PF03441 FAD binding domain of DNA photolyase 277 428 3.2E-42 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09520 94bf477c96f0e946c5c2209b93547e14 445 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 422 1.9E-135 T 11-11-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 S40542_RS00865 eecf77ffd4c6f0cd78b1c533b292a261 418 Gene3D G3DSA:1.20.1250.20 12 196 6.2E-18 T 11-11-2016 S40542_RS00865 eecf77ffd4c6f0cd78b1c533b292a261 418 Gene3D G3DSA:1.20.1250.20 227 402 4.3E-12 T 11-11-2016 S40542_RS00865 eecf77ffd4c6f0cd78b1c533b292a261 418 SUPERFAMILY SSF103473 15 404 1.7E-34 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS00865 eecf77ffd4c6f0cd78b1c533b292a261 418 Pfam PF07690 Major Facilitator Superfamily 16 369 2.5E-18 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS00865 eecf77ffd4c6f0cd78b1c533b292a261 418 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 76 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 S40542_RS14395 14cec0fcb91db8c087f1e4a619922055 327 Gene3D G3DSA:3.30.160.60 294 326 2.9E-16 T 11-11-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 S40542_RS14395 14cec0fcb91db8c087f1e4a619922055 327 Pfam PF02618 YceG-like family 40 321 2.8E-75 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like S40542_RS14395 14cec0fcb91db8c087f1e4a619922055 327 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 7 325 2.1E-88 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like S40542_RS03875 fc0d502d415c965a78f4ff93ef98245f 813 Pfam PF07660 Secretin and TonB N terminus short domain 59 105 6.8E-7 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 S40542_RS03875 fc0d502d415c965a78f4ff93ef98245f 813 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 150 813 5.8E-74 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 S40542_RS03875 fc0d502d415c965a78f4ff93ef98245f 813 Pfam PF07715 TonB-dependent Receptor Plug Domain 148 246 1.5E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS03875 fc0d502d415c965a78f4ff93ef98245f 813 SUPERFAMILY SSF56935 114 813 8.55E-96 T 11-11-2016 S40542_RS03875 fc0d502d415c965a78f4ff93ef98245f 813 Gene3D G3DSA:2.40.170.20 263 813 4.6E-90 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS03875 fc0d502d415c965a78f4ff93ef98245f 813 Gene3D G3DSA:2.170.130.10 122 259 4.3E-26 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS03875 fc0d502d415c965a78f4ff93ef98245f 813 SMART SM00965 58 108 1.3E-5 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 S40542_RS03875 fc0d502d415c965a78f4ff93ef98245f 813 Pfam PF00593 TonB dependent receptor 571 812 5.1E-23 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16365 d197244f202cf5e819d115ede91ed23a 363 Pfam PF02574 Homocysteine S-methyltransferase 29 335 8.7E-88 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 S40542_RS16365 d197244f202cf5e819d115ede91ed23a 363 SUPERFAMILY SSF82282 20 363 9.03E-100 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 S40542_RS16365 d197244f202cf5e819d115ede91ed23a 363 Gene3D G3DSA:3.20.20.330 17 360 1.2E-110 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 S40542_RS18025 79424614cef4d966cb024f4115168cf5 291 SUPERFAMILY SSF53335 65 268 4.07E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18025 79424614cef4d966cb024f4115168cf5 291 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 287 1.2E-98 T 11-11-2016 S40542_RS18025 79424614cef4d966cb024f4115168cf5 291 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 289 32.007 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 S40542_RS18025 79424614cef4d966cb024f4115168cf5 291 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 282 2.2E-98 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 S40542_RS18025 79424614cef4d966cb024f4115168cf5 291 PIRSF PIRSF000401 1 291 7.1E-93 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 S40542_RS18025 79424614cef4d966cb024f4115168cf5 291 Gene3D G3DSA:3.40.50.150 96 282 1.3E-40 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS20725 f4d2dd2e92c3c6e6d4cadd0d8d54588f 286 SUPERFAMILY SSF81336 97 278 8.37E-40 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 S40542_RS20725 f4d2dd2e92c3c6e6d4cadd0d8d54588f 286 Gene3D G3DSA:1.20.120.220 97 282 2.3E-50 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 S40542_RS20725 f4d2dd2e92c3c6e6d4cadd0d8d54588f 286 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 284 15.182 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 S40542_RS20725 f4d2dd2e92c3c6e6d4cadd0d8d54588f 286 Pfam PF00119 ATP synthase A chain 49 278 6.8E-55 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 S40542_RS20725 f4d2dd2e92c3c6e6d4cadd0d8d54588f 286 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 42 279 3.5E-39 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 S40542_RS20725 f4d2dd2e92c3c6e6d4cadd0d8d54588f 286 ProSitePatterns PS00449 ATP synthase a subunit signature. 221 230 - T 11-11-2016 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 S40542_RS03810 32346d42baaf3f36d0724797d21f5b88 255 Gene3D G3DSA:3.40.1630.10 7 55 2.5E-7 T 11-11-2016 S40542_RS03810 32346d42baaf3f36d0724797d21f5b88 255 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 252 38.044 T 11-11-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 S40542_RS03810 32346d42baaf3f36d0724797d21f5b88 255 Pfam PF04445 Putative SAM-dependent methyltransferase 17 250 7.1E-103 T 11-11-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 S40542_RS03810 32346d42baaf3f36d0724797d21f5b88 255 Gene3D G3DSA:3.40.50.150 57 251 5.4E-78 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03810 32346d42baaf3f36d0724797d21f5b88 255 SUPERFAMILY SSF53335 28 250 1.71E-72 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS05405 5db4888c82ea5f5812cab80ea2f8c804 565 Pfam PF02554 Carbon starvation protein CstA 1 365 3.8E-115 T 11-11-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 S40542_RS05405 5db4888c82ea5f5812cab80ea2f8c804 565 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 389 509 4.5E-32 T 11-11-2016 IPR025299 CstA, C-terminal domain S40542_RS08800 9caf0ce8f40a5855bb4604edc7b8f00e 328 Gene3D G3DSA:3.40.50.410 83 281 1.1E-29 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS08800 9caf0ce8f40a5855bb4604edc7b8f00e 328 SMART SM00327 86 286 5.0E-25 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS08800 9caf0ce8f40a5855bb4604edc7b8f00e 328 SUPERFAMILY SSF53300 83 264 4.15E-40 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS08800 9caf0ce8f40a5855bb4604edc7b8f00e 328 Pfam PF00092 von Willebrand factor type A domain 88 279 2.7E-29 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS06510 fbc6cc4c9dfa803497df1dc76561bade 109 Gene3D G3DSA:3.40.710.10 1 87 2.3E-4 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.5E-19 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 SMART SM00354 2 72 7.4E-28 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 SUPERFAMILY SSF53822 63 352 4.71E-57 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 11-11-2016 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 Gene3D G3DSA:3.40.50.2300 55 187 4.0E-23 T 11-11-2016 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 SUPERFAMILY SSF47413 2 60 1.13E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 7.3E-6 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 7.3E-6 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 Gene3D G3DSA:3.40.50.2300 188 326 1.3E-42 T 11-11-2016 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 Pfam PF13377 Periplasmic binding protein-like domain 185 348 3.3E-29 T 11-11-2016 S40542_RS08695 98a965947fb836424851dedbb30b27b9 353 Gene3D G3DSA:1.10.260.40 3 54 6.8E-24 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS13535 b78959ebcf3792d9f1583d0235fe7f80 698 SUPERFAMILY SSF56935 22 698 1.19E-97 T 11-11-2016 S40542_RS13535 b78959ebcf3792d9f1583d0235fe7f80 698 Pfam PF00593 TonB dependent receptor 443 697 1.6E-31 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS13535 b78959ebcf3792d9f1583d0235fe7f80 698 Gene3D G3DSA:2.40.170.20 153 698 1.3E-80 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS13535 b78959ebcf3792d9f1583d0235fe7f80 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 151 1.1E-10 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS13535 b78959ebcf3792d9f1583d0235fe7f80 698 Gene3D G3DSA:2.170.130.10 22 152 1.3E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 SUPERFAMILY SSF51055 16 76 3.66E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 Gene3D G3DSA:3.20.20.80 183 391 8.4E-60 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 Gene3D G3DSA:3.20.20.80 423 459 8.4E-60 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 Pfam PF14600 Cellulose-binding domain 481 536 1.4E-12 T 11-11-2016 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 SUPERFAMILY SSF51445 418 463 1.44E-56 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS19965 93054af93ac681baa9c52d7816835656 539 SUPERFAMILY SSF51445 182 388 1.44E-56 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS19965 93054af93ac681baa9c52d7816835656 539 Gene3D G3DSA:2.10.10.20 24 74 3.1E-14 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 ProSitePatterns PS01095 Chitinases family 18 active site. 285 293 - T 11-11-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 SUPERFAMILY SSF51055 487 538 1.11E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 Pfam PF00704 Glycosyl hydrolases family 18 185 446 2.1E-45 T 11-11-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 SMART SM00495 27 73 5.9E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 SMART SM00495 495 536 0.025 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 SMART SM00636 184 446 1.2E-49 T 11-11-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 Gene3D G3DSA:2.10.10.20 487 538 5.2E-15 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19965 93054af93ac681baa9c52d7816835656 539 Pfam PF02839 Carbohydrate binding domain 28 70 2.0E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 Gene3D G3DSA:3.60.20.10 15 432 9.4E-106 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 Gene3D G3DSA:2.160.20.60 1405 1613 4.1E-62 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 Pfam PF01645 Conserved region in glutamate synthase 975 1288 6.9E-101 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 Pfam PF00310 Glutamine amidotransferases class-II 15 419 1.1E-89 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 Gene3D G3DSA:3.20.20.70 443 776 3.9E-69 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 SUPERFAMILY SSF69336 1405 1613 3.4E-62 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 Gene3D G3DSA:3.20.20.70 961 1326 1.5E-134 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 Pfam PF01493 GXGXG motif 1403 1563 6.3E-52 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 Pfam PF04898 Glutamate synthase central domain 452 725 6.0E-78 T 11-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 SUPERFAMILY SSF51395 852 881 3.95E-164 T 11-11-2016 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 SUPERFAMILY SSF51395 979 1306 3.95E-164 T 11-11-2016 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 SUPERFAMILY SSF51395 448 818 3.95E-164 T 11-11-2016 S40542_RS07915 56002b01f9fbce35d8c1e2a8f022ad76 1809 SUPERFAMILY SSF56235 15 423 2.87E-90 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS07300 aa302c924a4dca7cf9ec4d198dad5e5a 480 Pfam PF12679 ABC-2 family transporter protein 8 278 1.9E-28 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 S40542_RS07300 aa302c924a4dca7cf9ec4d198dad5e5a 480 Pfam PF12040 Domain of unknown function (DUF3526) 292 438 2.6E-34 T 11-11-2016 IPR021913 Protein of unknown function DUF3526 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 SUPERFAMILY SSF54211 476 595 4.55E-40 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 SUPERFAMILY SSF50447 261 399 9.28E-31 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Pfam PF03764 Elongation factor G, domain IV 476 594 3.5E-44 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Gene3D G3DSA:3.30.230.10 481 596 2.3E-45 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Gene3D G3DSA:3.40.50.300 2 283 4.0E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 SMART SM00838 597 684 1.0E-45 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 3.5E-15 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 6.4E-61 T 11-11-2016 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Gene3D G3DSA:3.30.70.870 402 477 5.2E-31 T 11-11-2016 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 6.1E-290 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 SUPERFAMILY SSF54980 600 688 3.31E-28 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Gene3D G3DSA:3.30.70.240 597 682 2.6E-30 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Pfam PF14492 Elongation Factor G, domain II 401 475 3.1E-28 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Pfam PF00679 Elongation factor G C-terminus 597 683 2.1E-28 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Gene3D G3DSA:2.40.30.10 303 401 1.3E-33 T 11-11-2016 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 SMART SM00889 477 595 1.5E-61 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 SUPERFAMILY SSF52540 3 278 6.53E-99 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 2.4E-24 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 99.191 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS00460 25e9c27b0a76be7b7865d3d8c11098ae 695 SUPERFAMILY SSF54980 401 478 2.34E-20 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS08640 0b7ea79f263d6f301aa0eed49b3c1dd9 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 3.0E-65 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 S40542_RS08640 0b7ea79f263d6f301aa0eed49b3c1dd9 159 Gene3D G3DSA:2.40.280.10 13 133 1.4E-46 T 11-11-2016 IPR023620 Small protein B S40542_RS08640 0b7ea79f263d6f301aa0eed49b3c1dd9 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 69.295 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 S40542_RS08640 0b7ea79f263d6f301aa0eed49b3c1dd9 159 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 11-11-2016 IPR020081 SsrA-binding protein, conserved site S40542_RS08640 0b7ea79f263d6f301aa0eed49b3c1dd9 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 5.2E-52 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 S40542_RS08640 0b7ea79f263d6f301aa0eed49b3c1dd9 159 SUPERFAMILY SSF74982 8 138 6.02E-48 T 11-11-2016 IPR023620 Small protein B S40542_RS08640 0b7ea79f263d6f301aa0eed49b3c1dd9 159 Pfam PF01668 SmpB protein 13 76 1.7E-27 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 S40542_RS16160 d73ffef9aeb7e67e36233ef439cc5866 243 SMART SM00448 3 114 3.7E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS16160 d73ffef9aeb7e67e36233ef439cc5866 243 Gene3D G3DSA:1.10.10.10 137 235 7.4E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS16160 d73ffef9aeb7e67e36233ef439cc5866 243 SUPERFAMILY SSF46894 136 234 8.65E-31 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS16160 d73ffef9aeb7e67e36233ef439cc5866 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 233 9.6E-25 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS16160 d73ffef9aeb7e67e36233ef439cc5866 243 Gene3D G3DSA:3.40.50.2300 2 122 6.8E-36 T 11-11-2016 S40542_RS16160 d73ffef9aeb7e67e36233ef439cc5866 243 SMART SM00862 158 233 3.6E-25 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS16160 d73ffef9aeb7e67e36233ef439cc5866 243 SUPERFAMILY SSF52172 2 128 5.83E-36 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS16160 d73ffef9aeb7e67e36233ef439cc5866 243 Pfam PF00072 Response regulator receiver domain 5 114 1.9E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 2.6E-109 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 Gene3D G3DSA:1.10.150.20 244 326 2.9E-37 T 11-11-2016 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 SUPERFAMILY SSF56553 53 178 8.37E-40 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 SUPERFAMILY SSF47789 251 324 2.88E-25 T 11-11-2016 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 SUPERFAMILY SSF55257 179 231 4.61E-30 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 SUPERFAMILY SSF55257 6 53 4.61E-30 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.271 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 7.1E-22 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 Gene3D G3DSA:3.30.1360.10 10 51 9.1E-10 T 11-11-2016 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 SMART SM00662 23 234 1.5E-103 T 11-11-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 3.1E-24 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 Gene3D G3DSA:2.170.120.12 53 177 3.6E-38 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 2.2E-23 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS00990 67f62752c549ce3b022cf7494d3f016b 328 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 328 1.0E-35 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Gene3D G3DSA:2.10.10.20 32 78 1.1E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Gene3D G3DSA:2.10.10.20 87 130 3.7E-13 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 SUPERFAMILY SSF49299 285 369 6.15E-11 T 11-11-2016 IPR000601 PKD domain S40542_RS02360 73a0c728c4423320008d177a4134c099 905 SUPERFAMILY SSF51055 85 130 2.35E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 SUPERFAMILY SSF49785 758 900 3.15E-8 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Pfam PF02839 Carbohydrate binding domain 90 127 3.3E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Pfam PF02839 Carbohydrate binding domain 35 75 4.5E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 SUPERFAMILY SSF51055 26 79 1.23E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 SUPERFAMILY SSF49785 159 268 4.82E-16 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Pfam PF00754 F5/8 type C domain 151 234 3.1E-10 T 11-11-2016 IPR000421 Coagulation factor 5/8 C-terminal domain S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Gene3D G3DSA:2.60.120.260 780 903 2.9E-11 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Gene3D G3DSA:2.60.120.260 614 748 9.0E-9 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Gene3D G3DSA:2.60.120.260 148 281 1.3E-16 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS02360 73a0c728c4423320008d177a4134c099 905 SUPERFAMILY SSF49785 630 748 4.47E-5 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS02360 73a0c728c4423320008d177a4134c099 905 SMART SM00495 88 130 1.4E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 SMART SM00495 34 78 4.0E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Gene3D G3DSA:2.60.40.670 286 370 2.0E-9 T 11-11-2016 IPR000601 PKD domain S40542_RS02360 73a0c728c4423320008d177a4134c099 905 Pfam PF04450 Peptidase of plants and bacteria 379 592 5.5E-50 T 11-11-2016 IPR007541 Uncharacterised protein family, basic secretory protein S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 ProSitePatterns PS00012 Phosphopantetheine attachment site. 615 630 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:3.30.300.30 1536 1653 3.8E-32 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 SUPERFAMILY SSF52777 860 1102 2.96E-51 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 SUPERFAMILY SSF56801 1117 1660 1.44E-118 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 SUPERFAMILY SSF52777 679 852 1.0E-33 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:1.10.1200.10 582 660 2.5E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:1.10.1200.10 1654 1717 5.1E-19 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 SUPERFAMILY SSF47336 1643 1712 1.07E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1275 1286 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Pfam PF00668 Condensation domain 674 968 5.5E-54 T 11-11-2016 IPR001242 Condensation domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1157 1565 1.7E-107 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Pfam PF13193 AMP-binding enzyme C-terminal domain 1549 1624 2.0E-7 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:3.40.50.980 5 166 6.9E-33 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Pfam PF13745 HxxPF-repeated domain 993 1084 2.5E-23 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:3.40.50.980 1285 1440 1.1E-30 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:3.40.50.980 167 327 8.5E-37 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Pfam PF00550 Phosphopantetheine attachment site 593 654 1.8E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Pfam PF00550 Phosphopantetheine attachment site 1650 1712 1.3E-8 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:2.30.38.10 369 443 1.5E-17 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Pfam PF00501 AMP-binding enzyme 1139 1541 7.7E-72 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Pfam PF00501 AMP-binding enzyme 11 453 7.5E-82 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 SUPERFAMILY SSF47336 586 656 9.16E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:3.40.50.980 1133 1284 1.6E-37 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:2.30.38.10 1452 1524 1.9E-21 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 SUPERFAMILY SSF56801 4 331 1.09E-111 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 SUPERFAMILY SSF56801 360 562 1.09E-111 T 11-11-2016 S40542_RS19815 db6937e04bb424a07a208107a801e447 1749 Gene3D G3DSA:3.30.300.30 445 552 9.0E-11 T 11-11-2016 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 Gene3D G3DSA:3.40.50.450 1 213 6.6E-67 T 11-11-2016 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 SUPERFAMILY SSF53784 1 317 6.8E-97 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 Pfam PF00365 Phosphofructokinase 3 283 6.4E-94 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PIRSF PIRSF000532 1 328 7.2E-96 T 11-11-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 219 231 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 248 270 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS05780 6c69b03be75ec0dead8b7abb9c75575a 329 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 7.9E-60 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 Pfam PF03379 CcmB protein 12 225 5.5E-82 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 15 224 2.8E-84 T 11-11-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 PIRSF PIRSF002764 4 228 1.2E-80 T 11-11-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 164 183 2.2E-63 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 201 224 2.2E-63 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 35 56 2.2E-63 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 84 107 2.2E-63 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 61 78 2.2E-63 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06535 309699dd01b9cb59ea254be9a1308267 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 109 127 2.2E-63 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 SUPERFAMILY SSF51445 5 464 1.82E-135 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 Gene3D G3DSA:3.20.20.80 4 105 1.9E-107 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 Gene3D G3DSA:3.20.20.80 177 465 1.9E-107 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 Pfam PF00128 Alpha amylase, catalytic domain 29 378 4.9E-95 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 SMART SM00642 14 405 1.2E-122 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 Pfam PF16657 Maltogenic Amylase, C-terminal domain 467 536 8.6E-8 T 11-11-2016 IPR032091 Maltogenic Amylase, C-terminal S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 SUPERFAMILY SSF51011 467 538 3.3E-9 T 11-11-2016 S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 Gene3D G3DSA:3.90.400.10 106 176 2.3E-29 T 11-11-2016 S40542_RS07055 d88ec6809755d35fa820ad017a0e67e9 540 Gene3D G3DSA:2.60.40.1180 467 537 1.0E-8 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 Pfam PF01433 Peptidase family M1 28 399 5.6E-72 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 SUPERFAMILY SSF63737 22 216 7.98E-39 T 11-11-2016 S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 SUPERFAMILY SSF55486 242 462 3.96E-45 T 11-11-2016 S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 331 343 3.2E-18 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 327 3.2E-18 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 278 288 3.2E-18 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 153 168 3.2E-18 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 200 215 3.2E-18 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS07430 740d99222dc186633ed5b0ef8aaf57e5 835 Gene3D G3DSA:1.10.390.10 326 465 6.9E-24 T 11-11-2016 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 Gene3D G3DSA:1.20.120.640 307 392 1.0E-23 T 11-11-2016 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 1.9E-183 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 Gene3D G3DSA:3.40.50.620 20 305 9.0E-112 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 458 38.792 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 SMART SM00840 341 402 7.2E-25 T 11-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 Pfam PF09190 DALR domain 341 402 1.0E-21 T 11-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 9.3E-30 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 9.3E-30 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 9.3E-30 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 9.3E-30 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.2E-135 T 11-11-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 SUPERFAMILY SSF52374 2 313 8.85E-101 T 11-11-2016 S40542_RS16945 f89905a65aa40857a7d77936055ebfb4 459 SUPERFAMILY SSF47323 316 458 7.45E-40 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 SUPERFAMILY SSF56112 29 308 3.78E-59 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Gene3D G3DSA:3.30.200.20 19 156 2.8E-19 T 11-11-2016 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 41 64 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Gene3D G3DSA:1.25.40.10 898 950 3.7E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Gene3D G3DSA:1.25.40.10 1019 1099 3.7E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Gene3D G3DSA:1.25.40.10 721 823 3.7E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Gene3D G3DSA:1.25.40.10 1151 1191 3.7E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Pfam PF00069 Protein kinase domain 38 290 6.3E-43 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 SUPERFAMILY SSF52540 313 590 3.92E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 SMART SM00220 35 297 3.4E-40 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 SUPERFAMILY SSF48452 687 827 2.28E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Gene3D G3DSA:1.10.510.10 157 312 1.1E-35 T 11-11-2016 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Gene3D G3DSA:3.40.50.300 446 515 4.3E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Gene3D G3DSA:3.40.50.300 313 404 4.3E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 163 175 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 S40542_RS11235 9089953f9421fa6385a8a4ebc3cb64fc 1242 Pfam PF13191 AAA ATPase domain 315 495 1.5E-20 T 11-11-2016 S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 SMART SM00387 460 583 8.0E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 SMART SM00388 344 411 6.8E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 SUPERFAMILY SSF55874 400 580 1.96E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 535 7.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 7.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 7.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 570 4.6E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 SUPERFAMILY SSF47384 335 410 1.79E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 Pfam PF00512 His Kinase A (phospho-acceptor) domain 345 408 3.9E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 Gene3D G3DSA:3.30.565.10 398 583 1.9E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12575 c406a8de0323448f1f585303d567c3d2 587 Gene3D G3DSA:1.10.287.130 340 397 1.7E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 439 6.0E-136 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 PRINTS PR00175 Sodium/alanine symporter signature 181 199 4.2E-50 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 PRINTS PR00175 Sodium/alanine symporter signature 90 112 4.2E-50 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 PRINTS PR00175 Sodium/alanine symporter signature 302 320 4.2E-50 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 PRINTS PR00175 Sodium/alanine symporter signature 209 228 4.2E-50 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 PRINTS PR00175 Sodium/alanine symporter signature 347 369 4.2E-50 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 PRINTS PR00175 Sodium/alanine symporter signature 408 428 4.2E-50 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS03035 f1d1b186df216b1b3915f194c3ec1130 468 Pfam PF01235 Sodium:alanine symporter family 53 449 8.7E-143 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS07395 1954acb5edbfa1804d95f99bafea2c62 150 Gene3D G3DSA:3.40.630.30 4 137 2.1E-38 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS07395 1954acb5edbfa1804d95f99bafea2c62 150 SUPERFAMILY SSF55729 3 139 1.31E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS07395 1954acb5edbfa1804d95f99bafea2c62 150 Pfam PF00583 Acetyltransferase (GNAT) family 52 134 1.1E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS04340 6b2e339957d7295aa0b1b94236c9cc38 281 SMART SM00382 25 183 2.4E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS04340 6b2e339957d7295aa0b1b94236c9cc38 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 177 1.1E-13 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS04340 6b2e339957d7295aa0b1b94236c9cc38 281 SUPERFAMILY SSF52540 13 246 1.36E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04340 6b2e339957d7295aa0b1b94236c9cc38 281 Gene3D G3DSA:3.40.50.300 20 203 1.2E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18070 840451aea80ebe97253fca2bd5d672d7 305 Gene3D G3DSA:3.40.800.20 2 303 7.4E-96 T 11-11-2016 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS18070 840451aea80ebe97253fca2bd5d672d7 305 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 2.3E-17 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS18070 840451aea80ebe97253fca2bd5d672d7 305 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 2.3E-17 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS18070 840451aea80ebe97253fca2bd5d672d7 305 PRINTS PR01270 Histone deacetylase superfamily signature 232 242 2.3E-17 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS18070 840451aea80ebe97253fca2bd5d672d7 305 SUPERFAMILY SSF52768 1 304 2.25E-90 T 11-11-2016 S40542_RS18070 840451aea80ebe97253fca2bd5d672d7 305 Pfam PF00850 Histone deacetylase domain 20 302 2.5E-71 T 11-11-2016 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 SMART SM00490 301 401 2.8E-14 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 11 1288 0.0 T 11-11-2016 IPR010222 RNA helicase HrpA GO:0004004 S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 Pfam PF04408 Helicase associated domain (HA2) 464 554 5.6E-15 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 608 695 1.5E-18 T 11-11-2016 IPR011709 Domain of unknown function DUF1605 S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 SUPERFAMILY SSF52540 68 564 3.29E-108 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 Pfam PF11898 Domain of unknown function (DUF3418) 708 1289 3.3E-212 T 11-11-2016 IPR024590 RNA helicase HrpA, C-terminal S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 SMART SM00847 461 556 1.8E-31 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 Gene3D G3DSA:3.40.50.300 269 413 4.8E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 SMART SM00382 86 381 5.0E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 SMART SM00487 68 253 1.8E-27 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 Pfam PF00271 Helicase conserved C-terminal domain 284 400 2.9E-11 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 Pfam PF00270 DEAD/DEAH box helicase 82 227 5.5E-6 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS08745 ca5ab932e0bb868fedec26785aa87289 1293 Gene3D G3DSA:3.40.50.300 70 227 3.8E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08980 acd8b7177957efbd4c672a2b749515b7 322 Gene3D G3DSA:3.40.50.150 112 319 5.6E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS08980 acd8b7177957efbd4c672a2b749515b7 322 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 55.33 T 11-11-2016 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 S40542_RS08980 acd8b7177957efbd4c672a2b749515b7 322 Pfam PF08003 Protein of unknown function (DUF1698) 8 321 6.6E-155 T 11-11-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like S40542_RS08980 acd8b7177957efbd4c672a2b749515b7 322 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 4.7E-152 T 11-11-2016 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 S40542_RS08980 acd8b7177957efbd4c672a2b749515b7 322 SUPERFAMILY SSF53335 92 320 7.97E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS16315 70bf0418c629238187526d89a5593623 811 Pfam PF00271 Helicase conserved C-terminal domain 204 325 1.3E-12 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS16315 70bf0418c629238187526d89a5593623 811 Pfam PF00270 DEAD/DEAH box helicase 14 159 1.2E-8 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS16315 70bf0418c629238187526d89a5593623 811 Pfam PF08482 ATP-dependent helicase C-terminal 666 798 1.5E-53 T 11-11-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal S40542_RS16315 70bf0418c629238187526d89a5593623 811 Gene3D G3DSA:3.40.50.300 2 157 8.6E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16315 70bf0418c629238187526d89a5593623 811 SUPERFAMILY SSF52540 15 336 2.38E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16315 70bf0418c629238187526d89a5593623 811 Pfam PF04408 Helicase associated domain (HA2) 386 440 9.7E-9 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 S40542_RS16315 70bf0418c629238187526d89a5593623 811 SMART SM00490 226 326 1.4E-15 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS16315 70bf0418c629238187526d89a5593623 811 Gene3D G3DSA:3.40.50.300 181 336 4.3E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16315 70bf0418c629238187526d89a5593623 811 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 2 810 2.0E-276 T 11-11-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type S40542_RS16315 70bf0418c629238187526d89a5593623 811 PIRSF PIRSF005496 1 811 2.7E-270 T 11-11-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type S40542_RS16315 70bf0418c629238187526d89a5593623 811 SMART SM00847 385 478 0.0046 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 S40542_RS16315 70bf0418c629238187526d89a5593623 811 SMART SM00487 3 187 8.5E-13 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 SUPERFAMILY SSF109998 27 203 1.57E-38 T 11-11-2016 IPR027304 Trigger factor/SurA domain S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 SUPERFAMILY SSF54534 174 277 1.05E-23 T 11-11-2016 S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 Pfam PF00639 PPIC-type PPIASE domain 180 274 2.2E-18 T 11-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 Gene3D G3DSA:3.10.50.40 168 283 3.3E-27 T 11-11-2016 S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 Gene3D G3DSA:3.10.50.40 284 407 2.0E-30 T 11-11-2016 S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 Hamap MF_01183 Chaperone SurA [surA]. 6 429 33.015 T 11-11-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 SUPERFAMILY SSF54534 285 385 3.34E-28 T 11-11-2016 S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 Pfam PF13616 PPIC-type PPIASE domain 284 385 1.1E-21 T 11-11-2016 S40542_RS05740 dc09646941b04b0d33600b7b386e9dc4 430 Pfam PF09312 SurA N-terminal domain 27 144 1.8E-33 T 11-11-2016 IPR015391 SurA N-terminal S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 264 7.4E-84 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 264 32.922 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 124 2.5E-32 T 11-11-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 Gene3D G3DSA:3.40.50.720 1 162 3.2E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 SUPERFAMILY SSF55347 126 235 1.85E-33 T 11-11-2016 S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 263 1.1E-42 T 11-11-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 PIRSF PIRSF000161 1 266 5.1E-87 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 SUPERFAMILY SSF51735 1 125 4.27E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 SUPERFAMILY SSF51735 235 265 4.27E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09135 40249262f1f255ee07cb1ed25528fc07 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 11-11-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS18935 9fdcdcdafc00883bf078c6fcca40a011 129 Gene3D G3DSA:3.30.230.10 3 129 3.1E-52 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS18935 9fdcdcdafc00883bf078c6fcca40a011 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 11-11-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 S40542_RS18935 9fdcdcdafc00883bf078c6fcca40a011 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 31.926 T 11-11-2016 IPR023035 Ribosomal protein S9, bacterial/plastid S40542_RS18935 9fdcdcdafc00883bf078c6fcca40a011 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 1.1E-47 T 11-11-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 S40542_RS18935 9fdcdcdafc00883bf078c6fcca40a011 129 SUPERFAMILY SSF54211 4 129 7.59E-49 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS00555 8418c69f3824d287b347aef10d9a677d 205 Gene3D G3DSA:3.40.225.10 4 196 1.2E-48 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS00555 8418c69f3824d287b347aef10d9a677d 205 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 10 199 5.3E-69 T 11-11-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 S40542_RS00555 8418c69f3824d287b347aef10d9a677d 205 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 194 5.5E-42 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS00555 8418c69f3824d287b347aef10d9a677d 205 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 203 104.026 T 11-11-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 S40542_RS00555 8418c69f3824d287b347aef10d9a677d 205 SUPERFAMILY SSF53639 2 195 1.1E-47 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS00555 8418c69f3824d287b347aef10d9a677d 205 SMART SM01007 8 195 3.5E-50 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 SUPERFAMILY SSF50129 1 94 1.29E-30 T 11-11-2016 IPR011032 GroES-like S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 SMART SM00883 2 94 1.9E-51 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 Gene3D G3DSA:2.30.33.40 1 94 3.9E-34 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 24.34 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-11-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.3E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.1E-28 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.1E-28 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.1E-28 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 S40542_RS01855 211858af5f62941e63addbb6ebb60ba5 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.1E-28 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 Pfam PF03222 Tryptophan/tyrosine permease family 4 386 2.0E-114 T 11-11-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 11-11-2016 IPR013061 Tryptophan/tryrosine permease, conserved site S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.2E-79 T 11-11-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 S40542_RS17855 2236d40c77ce99dd74fd8cfac9be12d4 399 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 375 6.1E-116 T 11-11-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SUPERFAMILY SSF55785 478 590 2.47E-14 T 11-11-2016 IPR000014 PAS domain S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Gene3D G3DSA:1.20.120.160 1133 1248 5.0E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SUPERFAMILY SSF47384 591 673 2.55E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 470 594 5.0E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Pfam PF08448 PAS fold 479 589 1.3E-6 T 11-11-2016 IPR013656 PAS fold-4 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Pfam PF00072 Response regulator receiver domain 855 966 7.5E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Pfam PF00072 Response regulator receiver domain 997 1108 5.2E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 813 2.5E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 832 2.5E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 788 2.5E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 760 774 2.5E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SUPERFAMILY SSF52172 993 1122 9.53E-36 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SMART SM00448 995 1108 3.2E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SMART SM00448 853 966 2.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SMART SM00388 607 672 1.1E-24 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Gene3D G3DSA:3.30.450.40 309 453 2.9E-5 T 11-11-2016 IPR029016 GAF domain-like S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Pfam PF00512 His Kinase A (phospho-acceptor) domain 607 672 1.6E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SUPERFAMILY SSF55874 661 831 5.89E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SUPERFAMILY SSF47226 1145 1248 4.32E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SUPERFAMILY SSF47226 1091 1104 4.32E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SUPERFAMILY SSF52172 852 971 7.26E-28 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 719 831 3.6E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SUPERFAMILY SSF55781 304 457 3.53E-8 T 11-11-2016 IPR029016 GAF domain-like S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Gene3D G3DSA:3.30.450.20 476 611 7.3E-14 T 11-11-2016 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Gene3D G3DSA:3.30.565.10 681 830 1.2E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Gene3D G3DSA:3.40.50.2300 991 1115 6.1E-41 T 11-11-2016 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Gene3D G3DSA:3.40.50.2300 851 972 6.2E-29 T 11-11-2016 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Gene3D G3DSA:1.10.287.130 612 668 3.4E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 SMART SM00387 719 835 7.0E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS13505 833edccfb768ef104f0703d0b40e8112 1333 Pfam PF01627 Hpt domain 1180 1245 6.1E-10 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 SMART SM00357 52 118 2.3E-15 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 SUPERFAMILY SSF52540 91 371 9.0E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20040 e96f165909836cec1ae057d194aea914 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 7.1E-23 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.7E-19 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 Gene3D G3DSA:1.10.720.10 1 47 2.9E-23 T 11-11-2016 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 SMART SM00382 170 355 2.0E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS20040 e96f165909836cec1ae057d194aea914 419 Gene3D G3DSA:3.40.50.300 132 418 1.8E-104 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20040 e96f165909836cec1ae057d194aea914 419 SUPERFAMILY SSF68912 1 46 2.82E-13 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 247.598 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 Gene3D G3DSA:2.40.50.140 49 117 1.2E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS20040 e96f165909836cec1ae057d194aea914 419 SUPERFAMILY SSF50249 49 125 7.42E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS20040 e96f165909836cec1ae057d194aea914 419 Pfam PF07497 Rho termination factor, RNA-binding domain 53 125 6.1E-31 T 11-11-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 4.7E-216 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 S40542_RS20040 e96f165909836cec1ae057d194aea914 419 SMART SM00959 5 47 8.4E-21 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 S40542_RS01335 fd98297b4752e2ba2ac1d95241bb02e5 407 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 6.2E-176 T 11-11-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48 S40542_RS01335 fd98297b4752e2ba2ac1d95241bb02e5 407 PIRSF PIRSF001434 1 384 5.0E-136 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS01335 fd98297b4752e2ba2ac1d95241bb02e5 407 Gene3D G3DSA:3.90.1150.10 248 383 9.3E-56 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS01335 fd98297b4752e2ba2ac1d95241bb02e5 407 Gene3D G3DSA:3.40.640.10 7 247 1.5E-79 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS01335 fd98297b4752e2ba2ac1d95241bb02e5 407 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS01335 fd98297b4752e2ba2ac1d95241bb02e5 407 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 380 1.4E-141 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS01335 fd98297b4752e2ba2ac1d95241bb02e5 407 SUPERFAMILY SSF53383 10 383 2.53E-109 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS02350 08ac69302c123fefdde05b8c845c63c6 153 Gene3D G3DSA:3.40.630.30 13 144 2.0E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS02350 08ac69302c123fefdde05b8c845c63c6 153 Pfam PF00583 Acetyltransferase (GNAT) family 52 120 1.2E-14 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS02350 08ac69302c123fefdde05b8c845c63c6 153 SUPERFAMILY SSF55729 13 145 1.83E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS02350 08ac69302c123fefdde05b8c845c63c6 153 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 143 3.1E-34 T 11-11-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 S40542_RS18495 fdf021fa1b9d3a2dbe4542b31e432955 296 Gene3D G3DSA:3.90.550.10 4 268 9.3E-72 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18495 fdf021fa1b9d3a2dbe4542b31e432955 296 Pfam PF00483 Nucleotidyl transferase 6 242 2.0E-72 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 S40542_RS18495 fdf021fa1b9d3a2dbe4542b31e432955 296 SUPERFAMILY SSF53448 5 291 7.21E-91 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18495 fdf021fa1b9d3a2dbe4542b31e432955 296 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 6 290 2.4E-148 T 11-11-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 SUPERFAMILY SSF46785 3 70 8.97E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 Gene3D G3DSA:1.10.10.10 1 69 3.3E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 Gene3D G3DSA:2.10.109.10 79 200 8.5E-43 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 Pfam PF00717 Peptidase S24-like 117 183 5.1E-13 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 TIGRFAM TIGR00498 lexA: repressor LexA 1 200 9.7E-79 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 Hamap MF_00015 LexA repressor [lexA]. 3 202 31.698 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 SUPERFAMILY SSF51306 78 200 1.43E-33 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 Pfam PF01726 LexA DNA binding domain 1 65 2.3E-29 T 11-11-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 7.4E-11 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 7.4E-11 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 S40542_RS19465 01c7ce58b99bdafacdedab0de4deb01e 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 7.4E-11 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 Gene3D G3DSA:3.10.20.30 395 457 5.9E-22 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 SUPERFAMILY SSF81301 186 399 8.66E-64 T 11-11-2016 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 SUPERFAMILY SSF81271 384 454 2.4E-20 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 SUPERFAMILY SSF109604 25 197 7.22E-39 T 11-11-2016 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 SUPERFAMILY SSF55021 640 716 3.62E-13 T 11-11-2016 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 Gene3D G3DSA:3.30.460.10 184 330 4.1E-50 T 11-11-2016 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 SMART SM00954 241 351 1.3E-61 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 Gene3D G3DSA:3.30.70.260 641 714 3.9E-19 T 11-11-2016 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 Pfam PF02824 TGS domain 395 454 9.7E-19 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 Pfam PF13328 HD domain 42 181 5.9E-36 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 Pfam PF04607 Region found in RelA / SpoT proteins 241 350 1.9E-36 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 Pfam PF13291 ACT domain 640 716 1.4E-16 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 S40542_RS16785 d6e59c6d2e8d9488f4ffae2ea36e013d 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 55 716 1.1E-184 T 11-11-2016 IPR004811 RelA/SpoT family GO:0015969 S40542_RS00325 e3c140487532cd66868ebf227a236f5f 746 SUPERFAMILY SSF56935 578 746 1.07E-81 T 11-11-2016 S40542_RS00325 e3c140487532cd66868ebf227a236f5f 746 SUPERFAMILY SSF56935 35 548 1.07E-81 T 11-11-2016 S40542_RS00325 e3c140487532cd66868ebf227a236f5f 746 Gene3D G3DSA:2.40.170.20 161 746 4.1E-64 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS00325 e3c140487532cd66868ebf227a236f5f 746 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 33 746 5.6E-95 T 11-11-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 S40542_RS00325 e3c140487532cd66868ebf227a236f5f 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site S40542_RS00325 e3c140487532cd66868ebf227a236f5f 746 Gene3D G3DSA:2.170.130.10 47 160 4.6E-26 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS00325 e3c140487532cd66868ebf227a236f5f 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 155 5.8E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS00325 e3c140487532cd66868ebf227a236f5f 746 Pfam PF00593 TonB dependent receptor 457 745 1.1E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 Pfam PF00970 Oxidoreductase FAD-binding domain 198 267 8.5E-10 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 SUPERFAMILY SSF63380 106 273 7.7E-35 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 Gene3D G3DSA:3.10.20.30 37 123 1.2E-20 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 PIRSF PIRSF000044 1 408 3.3E-213 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 Gene3D G3DSA:2.40.30.10 125 265 1.6E-58 T 11-11-2016 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 386 1.2E-17 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 SUPERFAMILY SSF54292 39 123 8.41E-22 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 Gene3D G3DSA:3.40.50.80 270 407 7.7E-42 T 11-11-2016 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 61.29 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 210 217 9.3E-5 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 312 9.3E-5 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 277 296 9.3E-5 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 374 382 9.3E-5 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 8.4E-226 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 SUPERFAMILY SSF52343 258 403 2.36E-37 T 11-11-2016 S40542_RS05010 54b32c6459671810b24ffca36031e8a3 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 45 116 1.8E-9 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 462 596 3.0E-27 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 SUPERFAMILY SSF51735 456 626 2.25E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 SUPERFAMILY SSF55021 376 452 1.72E-18 T 11-11-2016 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 650 672 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 Gene3D G3DSA:3.30.360.10 626 782 3.0E-53 T 11-11-2016 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 Gene3D G3DSA:3.40.1160.10 1 48 2.6E-57 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 Gene3D G3DSA:3.40.1160.10 103 289 2.6E-57 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 Gene3D G3DSA:3.40.50.720 455 625 1.3E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 Pfam PF00742 Homoserine dehydrogenase 604 800 9.0E-45 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 PIRSF PIRSF000727 1 805 4.1E-303 T 11-11-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 SUPERFAMILY SSF53633 1 288 2.59E-71 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 SUPERFAMILY SSF55021 294 371 5.34E-21 T 11-11-2016 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 SUPERFAMILY SSF55347 604 787 7.85E-47 T 11-11-2016 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 Pfam PF00696 Amino acid kinase family 2 275 1.7E-45 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 450 4.6E-120 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS05445 215fea47328cdb37c7dea9894c4b69e2 805 Pfam PF13840 ACT domain 302 365 1.3E-9 T 11-11-2016 IPR027795 GATS-like ACT domain S40542_RS14545 3229b87d7591c729cbaa3a6ca46b4555 318 SMART SM00240 18 68 2.9E-12 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 S40542_RS14545 3229b87d7591c729cbaa3a6ca46b4555 318 Gene3D G3DSA:2.60.200.20 15 95 1.5E-22 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 S40542_RS14545 3229b87d7591c729cbaa3a6ca46b4555 318 Pfam PF00498 FHA domain 20 84 6.4E-16 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 S40542_RS14545 3229b87d7591c729cbaa3a6ca46b4555 318 SUPERFAMILY SSF49879 17 102 8.03E-22 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 S40542_RS06465 8483602e9137e829be6107a04be26fdc 255 Gene3D G3DSA:1.10.287.500 65 196 1.1E-47 T 11-11-2016 S40542_RS06465 8483602e9137e829be6107a04be26fdc 255 PIRSF PIRSF002884 20 255 1.9E-79 T 11-11-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 S40542_RS06465 8483602e9137e829be6107a04be26fdc 255 SUPERFAMILY SSF75708 35 254 3.92E-64 T 11-11-2016 S40542_RS06465 8483602e9137e829be6107a04be26fdc 255 Pfam PF04344 Chemotaxis phosphatase, CheZ 43 255 4.6E-75 T 11-11-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 SUPERFAMILY SSF51984 1 90 2.22E-24 T 11-11-2016 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 Gene3D G3DSA:3.40.1190.10 92 310 8.8E-81 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 359 1.0E-8 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 SUPERFAMILY SSF53244 309 442 7.33E-35 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 SUPERFAMILY SSF53623 97 307 9.03E-51 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 Pfam PF01225 Mur ligase family, catalytic domain 2 99 1.5E-19 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 445 56.736 T 11-11-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 Gene3D G3DSA:3.90.190.20 311 445 2.6E-32 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 Gene3D G3DSA:3.40.50.720 1 90 1.4E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 Pfam PF08245 Mur ligase middle domain 108 289 7.7E-20 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS03505 14c2bd8cf90fd619964d7133854b039d 449 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 445 3.9E-217 T 11-11-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01955 Frankia sp. LanC-like protein signature 131 147 9.7E-7 T 11-11-2016 IPR020434 LanC-like protein S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01955 Frankia sp. LanC-like protein signature 313 333 9.7E-7 T 11-11-2016 IPR020434 LanC-like protein S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01955 Frankia sp. LanC-like protein signature 264 287 9.7E-7 T 11-11-2016 IPR020434 LanC-like protein S40542_RS20595 5bacaf28c975199fb9df500831108017 406 SMART SM01260 34 404 1.6E-28 T 11-11-2016 IPR007822 Lanthionine synthetase C-like S40542_RS20595 5bacaf28c975199fb9df500831108017 406 SUPERFAMILY SSF158745 29 404 2.75E-50 T 11-11-2016 S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01950 LanC-like protein superfamily signature 37 55 2.0E-17 T 11-11-2016 IPR007822 Lanthionine synthetase C-like S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01950 LanC-like protein superfamily signature 200 216 2.0E-17 T 11-11-2016 IPR007822 Lanthionine synthetase C-like S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01950 LanC-like protein superfamily signature 314 327 2.0E-17 T 11-11-2016 IPR007822 Lanthionine synthetase C-like S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01950 LanC-like protein superfamily signature 264 284 2.0E-17 T 11-11-2016 IPR007822 Lanthionine synthetase C-like S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01950 LanC-like protein superfamily signature 375 392 2.0E-17 T 11-11-2016 IPR007822 Lanthionine synthetase C-like S40542_RS20595 5bacaf28c975199fb9df500831108017 406 PRINTS PR01950 LanC-like protein superfamily signature 132 147 2.0E-17 T 11-11-2016 IPR007822 Lanthionine synthetase C-like S40542_RS20595 5bacaf28c975199fb9df500831108017 406 Pfam PF05147 Lanthionine synthetase C-like protein 38 404 5.7E-43 T 11-11-2016 IPR007822 Lanthionine synthetase C-like S40542_RS20390 7c13c6ee0adfb0fb0bf907ae179f8c97 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 655 1.1E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS20390 7c13c6ee0adfb0fb0bf907ae179f8c97 663 Pfam PF08376 Nitrate and nitrite sensing 58 288 9.0E-46 T 11-11-2016 IPR013587 Nitrate/nitrite sensing protein S40542_RS20390 7c13c6ee0adfb0fb0bf907ae179f8c97 663 SUPERFAMILY SSF58104 349 658 2.09E-65 T 11-11-2016 S40542_RS20390 7c13c6ee0adfb0fb0bf907ae179f8c97 663 Gene3D G3DSA:1.10.287.950 411 628 1.4E-53 T 11-11-2016 S40542_RS20390 7c13c6ee0adfb0fb0bf907ae179f8c97 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 523 552 1.1E-6 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS20390 7c13c6ee0adfb0fb0bf907ae179f8c97 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 321 1.1E-6 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS20390 7c13c6ee0adfb0fb0bf907ae179f8c97 663 SMART SM00283 396 657 1.4E-65 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS14375 411a40b88a50fbb0be4a82ae4409fc33 667 SUPERFAMILY SSF58104 358 667 1.44E-67 T 11-11-2016 S40542_RS14375 411a40b88a50fbb0be4a82ae4409fc33 667 Pfam PF00672 HAMP domain 320 385 9.7E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS14375 411a40b88a50fbb0be4a82ae4409fc33 667 Gene3D G3DSA:1.10.287.950 419 635 5.0E-54 T 11-11-2016 S40542_RS14375 411a40b88a50fbb0be4a82ae4409fc33 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 452 665 7.4E-50 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS14375 411a40b88a50fbb0be4a82ae4409fc33 667 SMART SM00283 405 666 5.0E-63 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS14375 411a40b88a50fbb0be4a82ae4409fc33 667 SMART SM00304 338 390 8.1E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS18030 e7fe24d1b22a8d8b1a9ed84b6cd19090 323 PIRSF PIRSF006621 1 323 4.1E-104 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS18030 e7fe24d1b22a8d8b1a9ed84b6cd19090 323 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 50.409 T 11-11-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 S40542_RS18030 e7fe24d1b22a8d8b1a9ed84b6cd19090 323 Gene3D G3DSA:1.10.1200.80 252 321 2.6E-18 T 11-11-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 S40542_RS18030 e7fe24d1b22a8d8b1a9ed84b6cd19090 323 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS18030 e7fe24d1b22a8d8b1a9ed84b6cd19090 323 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 4.1E-131 T 11-11-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 S40542_RS18030 e7fe24d1b22a8d8b1a9ed84b6cd19090 323 SUPERFAMILY SSF51395 10 318 2.56E-89 T 11-11-2016 S40542_RS18030 e7fe24d1b22a8d8b1a9ed84b6cd19090 323 Gene3D G3DSA:3.20.20.70 8 245 2.0E-84 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS18030 e7fe24d1b22a8d8b1a9ed84b6cd19090 323 Pfam PF01207 Dihydrouridine synthase (Dus) 13 315 1.5E-110 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS18850 c3b56ad37953f3512bef1f6d14ff5550 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 287 7.0E-23 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 S40542_RS18850 c3b56ad37953f3512bef1f6d14ff5550 316 Gene3D G3DSA:3.40.50.720 2 112 2.4E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18850 c3b56ad37953f3512bef1f6d14ff5550 316 SUPERFAMILY SSF51735 96 264 8.5E-23 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18850 c3b56ad37953f3512bef1f6d14ff5550 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 22 308 6.3E-15 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 S40542_RS18850 c3b56ad37953f3512bef1f6d14ff5550 316 SUPERFAMILY SSF52283 4 129 3.61E-17 T 11-11-2016 S40542_RS18850 c3b56ad37953f3512bef1f6d14ff5550 316 Gene3D G3DSA:3.40.50.720 113 288 1.0E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 536 2.1E-49 T 11-11-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 Gene3D G3DSA:3.90.226.10 322 429 6.9E-60 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 Gene3D G3DSA:3.90.226.10 23 168 5.4E-52 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 Gene3D G3DSA:3.90.226.10 211 308 5.4E-52 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 Gene3D G3DSA:3.90.226.10 466 550 6.9E-60 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 PIRSF PIRSF001217 2 621 2.9E-198 T 11-11-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 SUPERFAMILY SSF52096 321 437 3.53E-41 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 SUPERFAMILY SSF52096 465 525 3.53E-41 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 SUPERFAMILY SSF52096 28 172 1.49E-24 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 SUPERFAMILY SSF52096 203 276 1.49E-24 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 10 612 1.5E-162 T 11-11-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 Pfam PF01343 Peptidase family S49 132 289 3.4E-27 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 S40542_RS10885 4b45e37bb5e9573b1525aae5d6b94308 622 Pfam PF01343 Peptidase family S49 389 539 1.9E-44 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 S40542_RS05075 5d72e7f6c2f6417d206a464a9dd90183 63 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 8.9E-20 T 11-11-2016 IPR021932 Protein of unknown function DUF3545 S40542_RS12325 0990e4afb5036037949c9986cd704841 272 SUPERFAMILY SSF56281 1 271 1.35E-35 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS12325 0990e4afb5036037949c9986cd704841 272 Pfam PF12706 Beta-lactamase superfamily domain 39 234 5.4E-12 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS12325 0990e4afb5036037949c9986cd704841 272 Gene3D G3DSA:3.60.15.10 1 271 2.8E-32 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS04120 2d4f6eedfc172922a1f2905ef942f0f4 207 Gene3D G3DSA:1.25.40.10 64 183 4.7E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS04120 2d4f6eedfc172922a1f2905ef942f0f4 207 Pfam PF08238 Sel1 repeat 154 170 16.0 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS04120 2d4f6eedfc172922a1f2905ef942f0f4 207 Pfam PF08238 Sel1 repeat 74 105 0.0052 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS04120 2d4f6eedfc172922a1f2905ef942f0f4 207 Pfam PF08238 Sel1 repeat 107 142 1.3E-4 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS04120 2d4f6eedfc172922a1f2905ef942f0f4 207 SMART SM00671 143 178 46.0 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS04120 2d4f6eedfc172922a1f2905ef942f0f4 207 SMART SM00671 71 106 0.0031 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS04120 2d4f6eedfc172922a1f2905ef942f0f4 207 SMART SM00671 107 142 1.1E-4 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS04120 2d4f6eedfc172922a1f2905ef942f0f4 207 SUPERFAMILY SSF81901 63 175 8.5E-20 T 11-11-2016 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 Pfam PF01627 Hpt domain 914 989 1.5E-7 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 Gene3D G3DSA:3.40.50.2300 661 786 1.2E-37 T 11-11-2016 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 2.4E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 2.4E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 2.4E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 2.4E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 Gene3D G3DSA:1.10.287.130 269 336 5.2E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 Pfam PF00072 Response regulator receiver domain 665 781 1.3E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 SMART SM00388 275 340 5.0E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 SUPERFAMILY SSF47226 884 1003 4.45E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 SUPERFAMILY SSF52172 663 787 4.27E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 SUPERFAMILY SSF47384 261 341 4.32E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 Gene3D G3DSA:1.20.120.160 904 1003 3.5E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 SMART SM00387 387 508 6.6E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 506 8.0E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 Gene3D G3DSA:3.30.565.10 347 506 4.1E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 SMART SM00448 663 781 3.6E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 Pfam PF00512 His Kinase A (phospho-acceptor) domain 275 340 5.4E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS05295 38e7155ae46f32900f943ddb3111d21f 1006 SUPERFAMILY SSF55874 329 509 9.56E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 SUPERFAMILY SSF54631 139 278 8.84E-28 T 11-11-2016 S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 Pfam PF01769 Divalent cation transporter 326 444 8.9E-21 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 Pfam PF00571 CBS domain 203 257 2.5E-7 T 11-11-2016 IPR000644 CBS domain S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 Pfam PF00571 CBS domain 140 192 0.0062 T 11-11-2016 IPR000644 CBS domain S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 Gene3D G3DSA:1.25.60.10 10 133 3.2E-22 T 11-11-2016 S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 Gene3D G3DSA:1.10.357.20 280 451 5.7E-45 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 SMART SM00116 210 258 0.002 T 11-11-2016 IPR000644 CBS domain S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 SMART SM00116 146 199 10.0 T 11-11-2016 IPR000644 CBS domain S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 451 7.2E-81 T 11-11-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 SUPERFAMILY SSF158791 12 136 6.67E-28 T 11-11-2016 S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 SMART SM00924 36 139 2.3E-33 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 SUPERFAMILY SSF161093 280 451 4.71E-42 T 11-11-2016 S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 Gene3D G3DSA:3.10.580.10 134 261 5.3E-17 T 11-11-2016 S40542_RS19055 c067820665ceb9af79e6699e7874f3f7 452 Pfam PF03448 MgtE intracellular N domain 37 136 7.5E-22 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain S40542_RS01955 b159450e2cf4eba06b53456d46bffd52 120 Gene3D G3DSA:3.40.50.2300 2 120 2.5E-38 T 11-11-2016 S40542_RS01955 b159450e2cf4eba06b53456d46bffd52 120 SUPERFAMILY SSF52172 1 120 1.2E-37 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS01955 b159450e2cf4eba06b53456d46bffd52 120 SMART SM00448 2 115 2.4E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01955 b159450e2cf4eba06b53456d46bffd52 120 Pfam PF00072 Response regulator receiver domain 4 115 2.4E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 Gene3D G3DSA:3.30.1490.100 242 356 2.0E-31 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 Pfam PF00817 impB/mucB/samB family 13 159 3.5E-51 T 11-11-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 Hamap MF_01113 DNA polymerase IV [dinB]. 7 355 35.43 T 11-11-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 Gene3D G3DSA:1.10.150.20 170 239 5.5E-21 T 11-11-2016 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 342 5.2E-6 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 SUPERFAMILY SSF100879 246 355 1.69E-19 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 SUPERFAMILY SSF56672 7 239 8.9E-91 T 11-11-2016 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 Pfam PF11798 IMS family HHH motif 171 201 2.5E-6 T 11-11-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 S40542_RS05400 aa5a920e01878c5970ebb8521a7f49de 357 Gene3D G3DSA:3.30.70.270 71 169 2.5E-35 T 11-11-2016 S40542_RS12605 6604c60a8cafa9f8caec7b5ef7dc5fdf 148 SUPERFAMILY SSF55729 5 147 3.16E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12605 6604c60a8cafa9f8caec7b5ef7dc5fdf 148 Gene3D G3DSA:3.40.630.30 24 147 6.1E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12605 6604c60a8cafa9f8caec7b5ef7dc5fdf 148 Pfam PF13508 Acetyltransferase (GNAT) domain 39 125 5.1E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS11590 540e6341359f7a0f13181354136a9226 332 Pfam PF14870 Photosynthesis system II assembly factor YCF48 115 221 2.6E-8 T 11-11-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain S40542_RS11590 540e6341359f7a0f13181354136a9226 332 Pfam PF14870 Photosynthesis system II assembly factor YCF48 62 110 6.8E-8 T 11-11-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain S40542_RS11590 540e6341359f7a0f13181354136a9226 332 SUPERFAMILY SSF50939 35 283 5.69E-28 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 S40542_RS11590 540e6341359f7a0f13181354136a9226 332 Gene3D G3DSA:2.130.10.140 38 321 4.7E-20 T 11-11-2016 S40542_RS20580 6b686aec008dda362e916b403095f7c6 174 Pfam PF02834 LigT like Phosphoesterase 16 87 8.0E-6 T 11-11-2016 IPR014051 Phosphoesterase, HXTX S40542_RS20580 6b686aec008dda362e916b403095f7c6 174 Gene3D G3DSA:3.90.1140.10 5 173 3.8E-32 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase S40542_RS20580 6b686aec008dda362e916b403095f7c6 174 SUPERFAMILY SSF55144 4 172 8.02E-31 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase S40542_RS20580 6b686aec008dda362e916b403095f7c6 174 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 5 172 3.6E-25 T 11-11-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 S40542_RS20580 6b686aec008dda362e916b403095f7c6 174 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 172 15.846 T 11-11-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 S40542_RS18215 fd059cfbca62944f014bf66efa75804e 495 SUPERFAMILY SSF109604 305 492 3.3E-43 T 11-11-2016 S40542_RS18215 fd059cfbca62944f014bf66efa75804e 495 Pfam PF02541 Ppx/GppA phosphatase family 20 300 9.2E-73 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 S40542_RS18215 fd059cfbca62944f014bf66efa75804e 495 SUPERFAMILY SSF53067 131 301 1.68E-38 T 11-11-2016 S40542_RS18215 fd059cfbca62944f014bf66efa75804e 495 Gene3D G3DSA:3.30.420.40 5 125 5.0E-37 T 11-11-2016 S40542_RS18215 fd059cfbca62944f014bf66efa75804e 495 SUPERFAMILY SSF53067 7 127 1.04E-31 T 11-11-2016 S40542_RS18215 fd059cfbca62944f014bf66efa75804e 495 Gene3D G3DSA:3.30.420.150 129 301 1.3E-44 T 11-11-2016 S40542_RS18215 fd059cfbca62944f014bf66efa75804e 495 PIRSF PIRSF001267 1 495 6.1E-167 T 11-11-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 Pfam PF00501 AMP-binding enzyme 442 824 1.2E-69 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 ProSitePatterns PS00455 Putative AMP-binding domain signature. 573 584 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 Gene3D G3DSA:2.30.38.10 742 812 1.5E-14 T 11-11-2016 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 SUPERFAMILY SSF56801 441 953 2.62E-101 T 11-11-2016 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 SMART SM01294 941 1005 0.0075 T 11-11-2016 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 Gene3D G3DSA:3.30.300.30 819 943 7.4E-22 T 11-11-2016 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 SUPERFAMILY SSF52777 17 174 4.45E-5 T 11-11-2016 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 SMART SM00823 Phosphopantetheine attachment site 940 1009 9.7E-8 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 SUPERFAMILY SSF47336 932 1005 2.09E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 Gene3D G3DSA:3.40.50.980 583 728 1.2E-31 T 11-11-2016 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 Gene3D G3DSA:3.40.50.980 442 582 4.1E-33 T 11-11-2016 S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 Gene3D G3DSA:1.10.1200.10 944 1011 1.7E-21 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 Pfam PF00550 Phosphopantetheine attachment site 942 1005 4.6E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 Pfam PF00668 Condensation domain 27 297 5.8E-12 T 11-11-2016 IPR001242 Condensation domain S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 ProSitePatterns PS00012 Phosphopantetheine attachment site. 964 979 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS19800 89cf5e23b8403de7da1ea5e352d36021 1044 SUPERFAMILY SSF52777 181 412 1.03E-18 T 11-11-2016 S40542_RS11510 80c7019fd5a3be8e27787acc07e89e13 265 Pfam PF00899 ThiF family 20 160 1.8E-37 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 S40542_RS11510 80c7019fd5a3be8e27787acc07e89e13 265 Gene3D G3DSA:3.40.50.720 5 254 1.9E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11510 80c7019fd5a3be8e27787acc07e89e13 265 SUPERFAMILY SSF69572 8 254 8.5E-61 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 S40542_RS03890 847c080d0bc6a154e9ff3e77d5510943 353 SUPERFAMILY SSF110849 102 150 5.06E-5 T 11-11-2016 IPR003115 ParB/Sulfiredoxin S40542_RS03890 847c080d0bc6a154e9ff3e77d5510943 353 Gene3D G3DSA:3.90.1530.10 103 143 9.7E-5 T 11-11-2016 S40542_RS15920 6b8caaeab1b9c5f45611d039fc473f3a 325 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS15920 6b8caaeab1b9c5f45611d039fc473f3a 325 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 25 1.4E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS15920 6b8caaeab1b9c5f45611d039fc473f3a 325 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 7.6E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS15920 6b8caaeab1b9c5f45611d039fc473f3a 325 Pfam PF16074 Type IV Pilus-assembly protein W 187 319 2.8E-28 T 11-11-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 S40542_RS01465 fd70b65339d5ce8f83a6630f936c7783 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 192 221 - T 11-11-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 S40542_RS01465 fd70b65339d5ce8f83a6630f936c7783 307 SUPERFAMILY SSF56752 3 302 1.7E-100 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 S40542_RS01465 fd70b65339d5ce8f83a6630f936c7783 307 Gene3D G3DSA:3.20.10.10 133 293 4.2E-57 T 11-11-2016 S40542_RS01465 fd70b65339d5ce8f83a6630f936c7783 307 Gene3D G3DSA:3.30.470.10 6 128 3.1E-42 T 11-11-2016 S40542_RS01465 fd70b65339d5ce8f83a6630f936c7783 307 Pfam PF01063 Amino-transferase class IV 35 266 9.9E-51 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 S40542_RS01465 fd70b65339d5ce8f83a6630f936c7783 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 305 9.9E-131 T 11-11-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 S40542_RS05635 c49908069d9c182ff66a19da8c05eec7 623 Gene3D G3DSA:3.90.1310.10 132 253 1.3E-35 T 11-11-2016 S40542_RS05635 c49908069d9c182ff66a19da8c05eec7 623 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 614 2.4E-236 T 11-11-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 S40542_RS05635 c49908069d9c182ff66a19da8c05eec7 623 Gene3D G3DSA:3.40.710.10 254 617 4.5E-103 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS05635 c49908069d9c182ff66a19da8c05eec7 623 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.0E-42 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 S40542_RS05635 c49908069d9c182ff66a19da8c05eec7 623 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 610 6.3E-72 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 S40542_RS05635 c49908069d9c182ff66a19da8c05eec7 623 SUPERFAMILY SSF56601 255 617 1.58E-96 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS05635 c49908069d9c182ff66a19da8c05eec7 623 SUPERFAMILY SSF56519 57 254 1.01E-50 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 S40542_RS19025 2ea1ef1e2042a9be51cf877c2363bc5c 241 SMART SM00382 28 230 4.1E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS19025 2ea1ef1e2042a9be51cf877c2363bc5c 241 Pfam PF00005 ABC transporter 19 166 2.3E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS19025 2ea1ef1e2042a9be51cf877c2363bc5c 241 SUPERFAMILY SSF52540 4 237 1.62E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19025 2ea1ef1e2042a9be51cf877c2363bc5c 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS19025 2ea1ef1e2042a9be51cf877c2363bc5c 241 Gene3D G3DSA:3.40.50.300 4 231 2.1E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19025 2ea1ef1e2042a9be51cf877c2363bc5c 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 2.9E-120 T 11-11-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 S40542_RS19025 2ea1ef1e2042a9be51cf877c2363bc5c 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.0E-6 T 11-11-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 SMART SM00267 178 349 2.7E-57 T 11-11-2016 IPR000160 GGDEF domain S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 SUPERFAMILY SSF55781 31 185 1.74E-14 T 11-11-2016 IPR029016 GAF domain-like S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 Pfam PF01590 GAF domain 32 169 5.2E-7 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 SUPERFAMILY SSF55073 194 347 2.75E-47 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 348 7.7E-54 T 11-11-2016 IPR000160 GGDEF domain S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 Gene3D G3DSA:3.30.70.270 191 347 1.1E-52 T 11-11-2016 S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 SMART SM00065 29 183 0.0022 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 345 2.8E-46 T 11-11-2016 IPR000160 GGDEF domain S40542_RS03545 3c6365207b7a7465b7d6a1a71f46eb16 350 Gene3D G3DSA:3.30.450.40 27 173 7.9E-9 T 11-11-2016 IPR029016 GAF domain-like S40542_RS19980 3f84763032aa5c0d75b6548f1c01cbbb 217 SUPERFAMILY SSF47413 19 68 9.48E-8 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS19980 3f84763032aa5c0d75b6548f1c01cbbb 217 SUPERFAMILY SSF51306 84 215 2.88E-22 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C S40542_RS19980 3f84763032aa5c0d75b6548f1c01cbbb 217 ProSitePatterns PS00501 Signal peptidases I serine active site. 134 141 - T 11-11-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 S40542_RS19980 3f84763032aa5c0d75b6548f1c01cbbb 217 Gene3D G3DSA:1.10.260.40 20 67 1.0E-8 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS19980 3f84763032aa5c0d75b6548f1c01cbbb 217 Gene3D G3DSA:2.10.109.10 85 216 2.4E-23 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain S40542_RS19980 3f84763032aa5c0d75b6548f1c01cbbb 217 Pfam PF00717 Peptidase S24-like 132 198 6.7E-12 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B S40542_RS03800 78c129fd76a4d0fcc85923f3864bebc7 681 Pfam PF01432 Peptidase family M3 221 676 7.4E-157 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 S40542_RS03800 78c129fd76a4d0fcc85923f3864bebc7 681 Gene3D G3DSA:3.40.390.10 358 503 6.5E-58 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS03800 78c129fd76a4d0fcc85923f3864bebc7 681 Gene3D G3DSA:1.10.1370.10 140 348 3.0E-136 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 S40542_RS03800 78c129fd76a4d0fcc85923f3864bebc7 681 Gene3D G3DSA:1.10.1370.10 504 677 3.0E-136 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 S40542_RS03800 78c129fd76a4d0fcc85923f3864bebc7 681 SUPERFAMILY SSF55486 1 676 6.5E-204 T 11-11-2016 S40542_RS03800 78c129fd76a4d0fcc85923f3864bebc7 681 Gene3D G3DSA:1.20.1050.40 10 137 1.3E-26 T 11-11-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal S40542_RS20425 522fa2bed3f6743052627236e946c306 835 Pfam PF00593 TonB dependent receptor 559 834 3.5E-25 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS20425 522fa2bed3f6743052627236e946c306 835 Gene3D G3DSA:2.40.170.20 239 520 1.3E-65 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS20425 522fa2bed3f6743052627236e946c306 835 Gene3D G3DSA:2.40.170.20 553 835 1.3E-65 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS20425 522fa2bed3f6743052627236e946c306 835 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 113 835 1.8E-121 T 11-11-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 S40542_RS20425 522fa2bed3f6743052627236e946c306 835 SUPERFAMILY SSF56935 740 835 9.17E-78 T 11-11-2016 S40542_RS20425 522fa2bed3f6743052627236e946c306 835 SUPERFAMILY SSF56935 107 708 9.17E-78 T 11-11-2016 S40542_RS20425 522fa2bed3f6743052627236e946c306 835 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 235 2.0E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS20425 522fa2bed3f6743052627236e946c306 835 Gene3D G3DSA:2.170.130.10 127 238 1.3E-27 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS20425 522fa2bed3f6743052627236e946c306 835 SMART SM00965 53 104 6.2E-4 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 SMART SM00267 243 411 4.0E-42 T 11-11-2016 IPR000160 GGDEF domain S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 Pfam PF00072 Response regulator receiver domain 5 105 2.9E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 Pfam PF00072 Response regulator receiver domain 125 234 6.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 408 9.3E-38 T 11-11-2016 IPR000160 GGDEF domain S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 410 6.6E-41 T 11-11-2016 IPR000160 GGDEF domain S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 SUPERFAMILY SSF55073 259 411 2.12E-39 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 Gene3D G3DSA:3.40.50.2300 4 116 1.2E-13 T 11-11-2016 S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 SUPERFAMILY SSF52172 122 258 3.98E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 Gene3D G3DSA:3.40.50.2300 119 240 2.2E-31 T 11-11-2016 S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 SMART SM00448 123 237 9.5E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 SMART SM00448 3 114 0.0062 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 SUPERFAMILY SSF52172 4 105 2.7E-15 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS04295 7d43bbda8d025037e21b8cc37eae0487 411 Gene3D G3DSA:3.30.70.270 256 411 5.8E-45 T 11-11-2016 S40542_RS05485 6365c13ded1644488f3419786d5829c3 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 6.2E-52 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05485 6365c13ded1644488f3419786d5829c3 154 Gene3D G3DSA:3.40.50.960 1 152 1.2E-61 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05485 6365c13ded1644488f3419786d5829c3 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.4E-54 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05485 6365c13ded1644488f3419786d5829c3 154 SUPERFAMILY SSF52121 3 154 1.83E-57 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05485 6365c13ded1644488f3419786d5829c3 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 30.837 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS08095 89b7f708cdb038363849f2b7193b794b 240 Gene3D G3DSA:3.40.50.300 1 219 3.4E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08095 89b7f708cdb038363849f2b7193b794b 240 SMART SM00382 30 219 1.2E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS08095 89b7f708cdb038363849f2b7193b794b 240 Pfam PF00005 ABC transporter 21 169 2.3E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS08095 89b7f708cdb038363849f2b7193b794b 240 SUPERFAMILY SSF52540 1 221 1.16E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08095 89b7f708cdb038363849f2b7193b794b 240 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 186 1.4E-13 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 SUPERFAMILY SSF56784 4 211 7.63E-45 T 11-11-2016 IPR023214 HAD-like domain S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.8E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.8E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 175 188 1.8E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.8E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.8E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 Gene3D G3DSA:3.40.50.1000 91 211 1.1E-36 T 11-11-2016 IPR023214 HAD-like domain S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 Gene3D G3DSA:3.40.50.1000 3 16 1.1E-36 T 11-11-2016 IPR023214 HAD-like domain S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 1.3E-35 T 11-11-2016 IPR023214 HAD-like domain S40542_RS05820 76239643ab5dfebc06dbf166a6559868 217 Gene3D G3DSA:1.10.150.240 17 84 5.8E-4 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 309 892 1.1E-279 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Pfam PF00009 Elongation factor Tu GTP binding domain 397 552 4.9E-34 T 11-11-2016 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 396 550 1.0E-32 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Gene3D G3DSA:3.40.50.300 393 552 6.8E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 SUPERFAMILY SSF52156 670 799 5.89E-38 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Pfam PF11987 Translation-initiation factor 2 677 782 4.6E-37 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 317 367 2.1E-15 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 SUPERFAMILY SSF46955 3 49 6.23E-11 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 98 1.0E-15 T 11-11-2016 IPR013575 Initiation factor 2 associated domain, bacterial S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 ProSitePatterns PS01176 Initiation factor 2 signature. 843 865 - T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Gene3D G3DSA:3.40.50.10050 692 771 5.1E-25 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Gene3D G3DSA:2.40.30.10 565 656 2.1E-21 T 11-11-2016 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 890 17.54 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 SUPERFAMILY SSF52540 391 559 2.59E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Gene3D G3DSA:3.30.56.50 2 49 1.4E-18 T 11-11-2016 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 Gene3D G3DSA:2.40.30.10 794 891 6.9E-39 T 11-11-2016 S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 SUPERFAMILY SSF50447 565 647 6.36E-24 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS05985 506fcc57666d9cab0936105bdbdc483f 892 SUPERFAMILY SSF50447 794 890 6.45E-34 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS01535 586ed4136e53c261557f4d3297078018 214 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 198 27.145 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 S40542_RS01535 586ed4136e53c261557f4d3297078018 214 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 2.2E-71 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 S40542_RS01535 586ed4136e53c261557f4d3297078018 214 Pfam PF01926 50S ribosome-binding GTPase 30 147 1.1E-19 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS01535 586ed4136e53c261557f4d3297078018 214 Gene3D G3DSA:3.40.50.300 14 197 3.9E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01535 586ed4136e53c261557f4d3297078018 214 SUPERFAMILY SSF52540 16 198 1.39E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 Gene3D G3DSA:3.30.360.10 164 318 1.9E-66 T 11-11-2016 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 PIRSF PIRSF000149 1 337 9.1E-134 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 Gene3D G3DSA:3.40.50.720 1 163 4.5E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.0E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.0E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.0E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.0E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.0E-31 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 5 328 8.7E-171 T 11-11-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 SUPERFAMILY SSF55347 155 317 3.27E-62 T 11-11-2016 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 66.337 T 11-11-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 SMART SM00846 3 155 1.1E-77 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 SUPERFAMILY SSF51735 1 177 2.39E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 4.2E-53 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 1.2E-58 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS03575 dac29395ddbcb1c2cffc322ab312b2ac 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 2.2E-113 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 Pfam PF12002 MgsA AAA+ ATPase C terminal 266 432 1.1E-64 T 11-11-2016 IPR021886 MgsA AAA+ ATPase C-terminal S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 Gene3D G3DSA:1.10.3710.10 346 444 6.5E-34 T 11-11-2016 S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 SMART SM00382 48 165 4.0E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 Gene3D G3DSA:1.20.272.10 247 345 7.1E-41 T 11-11-2016 S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 SUPERFAMILY SSF52540 12 239 5.29E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 17 140 1.3E-17 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 Gene3D G3DSA:3.40.50.300 13 153 4.5E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 Gene3D G3DSA:1.10.8.60 154 222 1.1E-13 T 11-11-2016 S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 Pfam PF16193 AAA C-terminal domain 188 265 3.5E-23 T 11-11-2016 IPR032423 AAA ATPase, C-terminal domain S40542_RS11035 e77930034d81666cb9834dad5e7ae227 451 SUPERFAMILY SSF48019 250 432 4.42E-72 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 Pfam PF00072 Response regulator receiver domain 182 303 5.8E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 Gene3D G3DSA:3.40.50.2300 182 308 3.8E-27 T 11-11-2016 S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 SMART SM00260 17 153 2.9E-22 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 SUPERFAMILY SSF52172 177 307 3.84E-25 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 SMART SM00448 180 303 1.0E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 Pfam PF01584 CheW-like domain 21 155 9.4E-36 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 SUPERFAMILY SSF50341 16 157 1.96E-36 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 PIRSF PIRSF002867 1 310 3.8E-106 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV S40542_RS16650 5d5f7290d6b477f2c66c34b5357e8561 310 Gene3D G3DSA:2.30.30.40 89 144 0.001 T 11-11-2016 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 SUPERFAMILY SSF53223 4 143 2.3E-42 T 11-11-2016 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 Gene3D G3DSA:3.40.50.720 149 334 2.5E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 215 298 4.1E-10 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 SMART SM00839 141 345 4.0E-71 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 Gene3D G3DSA:3.40.192.10 3 148 7.9E-61 T 11-11-2016 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 SUPERFAMILY SSF51735 138 342 1.32E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.1E-15 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 193 1.1E-15 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 283 294 1.1E-15 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 PIRSF PIRSF000188 1 345 3.1E-149 T 11-11-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 S40542_RS14940 af14d10c269cfa56cfa2ee49489ad420 346 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 13 132 5.3E-25 T 11-11-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 S40542_RS12820 1e682109f4a60594dff479742a8c20c9 222 SUPERFAMILY SSF52172 2 120 3.13E-35 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS12820 1e682109f4a60594dff479742a8c20c9 222 SUPERFAMILY SSF46894 126 220 5.39E-22 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS12820 1e682109f4a60594dff479742a8c20c9 222 Gene3D G3DSA:1.10.10.10 129 221 4.0E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS12820 1e682109f4a60594dff479742a8c20c9 222 SMART SM00862 146 220 5.3E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS12820 1e682109f4a60594dff479742a8c20c9 222 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS12820 1e682109f4a60594dff479742a8c20c9 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 3.0E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS12820 1e682109f4a60594dff479742a8c20c9 222 SMART SM00448 1 112 8.6E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS12820 1e682109f4a60594dff479742a8c20c9 222 Gene3D G3DSA:3.40.50.2300 2 120 3.0E-33 T 11-11-2016 S40542_RS10010 7652065cf5afb6122a4d3e6f668e7d11 280 Pfam PF00072 Response regulator receiver domain 5 112 1.4E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10010 7652065cf5afb6122a4d3e6f668e7d11 280 SMART SM00850 175 272 1.3E-28 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS10010 7652065cf5afb6122a4d3e6f668e7d11 280 Gene3D G3DSA:3.40.50.2300 1 125 5.9E-26 T 11-11-2016 S40542_RS10010 7652065cf5afb6122a4d3e6f668e7d11 280 SMART SM00448 2 112 3.3E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10010 7652065cf5afb6122a4d3e6f668e7d11 280 Gene3D G3DSA:2.40.50.40 172 234 8.0E-18 T 11-11-2016 S40542_RS10010 7652065cf5afb6122a4d3e6f668e7d11 280 Pfam PF04397 LytTr DNA-binding domain 178 271 2.9E-21 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS10010 7652065cf5afb6122a4d3e6f668e7d11 280 SUPERFAMILY SSF52172 1 117 1.99E-27 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15855 a00c2bd66bb8a7afa7387a88432fb8b5 202 SUPERFAMILY SSF53955 8 170 7.36E-24 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS15855 a00c2bd66bb8a7afa7387a88432fb8b5 202 Gene3D G3DSA:1.10.530.10 42 160 4.1E-7 T 11-11-2016 S40542_RS04695 67dec3a79792965a5d44ab28e1259ef7 59 Pfam PF13617 YnbE-like lipoprotein 4 56 1.6E-25 T 11-11-2016 IPR025985 YnbE-like lipoprotein S40542_RS04695 67dec3a79792965a5d44ab28e1259ef7 59 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 14 59 7.0E-19 T 11-11-2016 S40542_RS00590 68bdd0fdde7153eefff34c0a2426d489 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 5.3E-18 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS00590 68bdd0fdde7153eefff34c0a2426d489 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 4.2E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS00590 68bdd0fdde7153eefff34c0a2426d489 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 4.2E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS00590 68bdd0fdde7153eefff34c0a2426d489 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 4.2E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS00590 68bdd0fdde7153eefff34c0a2426d489 218 Gene3D G3DSA:1.10.10.10 152 212 2.7E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS00590 68bdd0fdde7153eefff34c0a2426d489 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS00590 68bdd0fdde7153eefff34c0a2426d489 218 SUPERFAMILY SSF46894 151 211 1.8E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS00590 68bdd0fdde7153eefff34c0a2426d489 218 SMART SM00421 152 209 5.2E-21 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF55874 1019 1192 6.81E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00388 965 1030 2.0E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Gene3D G3DSA:3.30.450.20 839 970 1.3E-16 T 11-11-2016 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF00512 His Kinase A (phospho-acceptor) domain 965 1030 1.2E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00387 1077 1194 3.2E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF47226 1439 1452 5.5E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF47226 1485 1566 5.5E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF00989 PAS fold 697 807 1.6E-11 T 11-11-2016 IPR013767 PAS fold GO:0006355 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF00989 PAS fold 561 673 5.6E-13 T 11-11-2016 IPR013767 PAS fold GO:0006355 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00448 1340 1456 3.5E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00086 902 945 88.0 T 11-11-2016 IPR001610 PAC motif S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00086 636 676 3.8 T 11-11-2016 IPR001610 PAC motif S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00086 491 533 2.7E-10 T 11-11-2016 IPR001610 PAC motif S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00086 768 810 1.5E-4 T 11-11-2016 IPR001610 PAC motif S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Gene3D G3DSA:3.30.565.10 1016 1193 1.3E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Gene3D G3DSA:3.40.50.2300 1337 1458 1.3E-37 T 11-11-2016 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Gene3D G3DSA:1.10.287.130 971 1015 5.1E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF13426 PAS domain 437 532 6.6E-20 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF158472 353 394 8.11E-5 T 11-11-2016 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF47384 951 1032 9.02E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF08447 PAS fold 852 934 6.7E-13 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF01627 Hpt domain 1507 1586 2.1E-8 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF55785 423 532 4.03E-26 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF00072 Response regulator receiver domain 1342 1456 3.8E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Gene3D G3DSA:1.20.120.160 1498 1584 6.8E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF00672 HAMP domain 331 393 4.6E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1119 1133 1.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1154 1172 1.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1178 1191 1.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1137 1147 1.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00091 827 896 26.0 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00091 695 761 3.5E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00091 416 485 3.3E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SMART SM00091 560 626 4.8E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF55785 686 808 4.19E-21 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF55785 841 946 1.77E-13 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF55785 547 674 4.64E-24 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Gene3D G3DSA:3.30.450.20 686 808 1.9E-22 T 11-11-2016 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 421 539 5.0E-17 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 852 951 2.1E-6 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 556 680 6.5E-27 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 691 817 2.0E-22 T 11-11-2016 IPR000014 PAS domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1078 1193 1.3E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Gene3D G3DSA:3.30.450.20 428 532 2.5E-34 T 11-11-2016 S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 SUPERFAMILY SSF52172 1341 1475 1.57E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS09970 a2b76cd68026b156afbd5a290b2cfd4e 1594 Gene3D G3DSA:3.30.450.20 549 674 1.9E-26 T 11-11-2016 S40542_RS06505 1c2d3efd19d02e038bf9c9f4dbf52f01 132 Gene3D G3DSA:3.40.710.10 1 131 5.3E-22 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS06505 1c2d3efd19d02e038bf9c9f4dbf52f01 132 Pfam PF00144 Beta-lactamase 1 130 2.4E-15 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS06505 1c2d3efd19d02e038bf9c9f4dbf52f01 132 SUPERFAMILY SSF56601 1 131 6.93E-22 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS06635 2a753348d8a9a24ab7f887d01c820f88 257 Gene3D G3DSA:3.40.1180.10 5 247 5.1E-98 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 S40542_RS06635 2a753348d8a9a24ab7f887d01c820f88 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 13 240 2.0E-93 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 S40542_RS06635 2a753348d8a9a24ab7f887d01c820f88 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 11-11-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 S40542_RS06635 2a753348d8a9a24ab7f887d01c820f88 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 241 39.798 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 S40542_RS06635 2a753348d8a9a24ab7f887d01c820f88 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 240 6.9E-80 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 S40542_RS06635 2a753348d8a9a24ab7f887d01c820f88 257 SUPERFAMILY SSF64005 11 236 3.01E-86 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 S40542_RS10695 44600b78988213c28dfc319e18323a04 526 Pfam PF00990 Diguanylate cyclase, GGDEF domain 371 519 3.3E-39 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10695 44600b78988213c28dfc319e18323a04 526 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 521 3.5E-43 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10695 44600b78988213c28dfc319e18323a04 526 Gene3D G3DSA:3.30.70.270 371 524 5.5E-47 T 11-11-2016 S40542_RS10695 44600b78988213c28dfc319e18323a04 526 SUPERFAMILY SSF103190 192 268 3.81E-11 T 11-11-2016 IPR029151 Periplasmic sensor domain-like S40542_RS10695 44600b78988213c28dfc319e18323a04 526 Gene3D G3DSA:3.30.450.20 153 277 3.9E-15 T 11-11-2016 S40542_RS10695 44600b78988213c28dfc319e18323a04 526 SUPERFAMILY SSF103190 86 188 2.08E-6 T 11-11-2016 IPR029151 Periplasmic sensor domain-like S40542_RS10695 44600b78988213c28dfc319e18323a04 526 SUPERFAMILY SSF55073 374 522 1.02E-45 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS10695 44600b78988213c28dfc319e18323a04 526 SMART SM00267 358 523 6.0E-52 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10695 44600b78988213c28dfc319e18323a04 526 Pfam PF02743 Cache domain 50 273 2.4E-23 T 11-11-2016 IPR033479 Double Cache domain 1 S40542_RS02865 dd40d1883ce52c28c65d40e1a27ec1ca 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 120 2.6E-16 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS02865 dd40d1883ce52c28c65d40e1a27ec1ca 126 SUPERFAMILY SSF81343 1 125 1.46E-18 T 11-11-2016 S40542_RS02865 dd40d1883ce52c28c65d40e1a27ec1ca 126 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 122 7.7E-25 T 11-11-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS02865 dd40d1883ce52c28c65d40e1a27ec1ca 126 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 11-11-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS02865 dd40d1883ce52c28c65d40e1a27ec1ca 126 PIRSF PIRSF000178 1 125 6.7E-20 T 11-11-2016 S40542_RS02865 dd40d1883ce52c28c65d40e1a27ec1ca 126 Gene3D G3DSA:1.20.1300.10 1 125 3.2E-25 T 11-11-2016 S40542_RS12105 f1205e703d2d010072e7eeaa99dc1078 1243 Gene3D G3DSA:3.10.170.10 275 408 1.1E-4 T 11-11-2016 IPR013856 Peptidase M4 domain GO:0004222 S40542_RS12105 f1205e703d2d010072e7eeaa99dc1078 1243 Gene3D G3DSA:1.10.390.10 432 577 6.6E-17 T 11-11-2016 S40542_RS12105 f1205e703d2d010072e7eeaa99dc1078 1243 Gene3D G3DSA:2.60.40.670 1088 1141 1.9E-9 T 11-11-2016 IPR000601 PKD domain S40542_RS12105 f1205e703d2d010072e7eeaa99dc1078 1243 SUPERFAMILY SSF49299 1083 1136 3.01E-9 T 11-11-2016 IPR000601 PKD domain S40542_RS12105 f1205e703d2d010072e7eeaa99dc1078 1243 SUPERFAMILY SSF55486 287 575 1.39E-29 T 11-11-2016 S40542_RS12105 f1205e703d2d010072e7eeaa99dc1078 1243 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 434 574 2.6E-12 T 11-11-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 S40542_RS12105 f1205e703d2d010072e7eeaa99dc1078 1243 Pfam PF00801 PKD domain 1084 1124 3.1E-8 T 11-11-2016 IPR000601 PKD domain S40542_RS12105 f1205e703d2d010072e7eeaa99dc1078 1243 SMART SM00089 1064 1143 7.3E-7 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS01655 ac45095010a6333a1e6d17642cc72a40 181 Gene3D G3DSA:3.30.420.10 5 180 2.7E-74 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS01655 ac45095010a6333a1e6d17642cc72a40 181 SUPERFAMILY SSF53098 2 180 2.89E-50 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS01655 ac45095010a6333a1e6d17642cc72a40 181 Pfam PF00929 Exonuclease 9 168 4.0E-36 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS01655 ac45095010a6333a1e6d17642cc72a40 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.516 T 11-11-2016 IPR022894 Oligoribonuclease GO:0016788 S40542_RS01655 ac45095010a6333a1e6d17642cc72a40 181 SMART SM00479 7 180 3.6E-17 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS10925 d62fea88e912d0661fbddd67fd62a714 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 4.2E-196 T 11-11-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 S40542_RS10925 d62fea88e912d0661fbddd67fd62a714 423 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS10925 d62fea88e912d0661fbddd67fd62a714 423 SUPERFAMILY SSF53383 2 421 4.74E-129 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS10925 d62fea88e912d0661fbddd67fd62a714 423 Gene3D G3DSA:3.90.1150.10 286 422 2.5E-47 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS10925 d62fea88e912d0661fbddd67fd62a714 423 Gene3D G3DSA:3.40.640.10 3 285 3.5E-117 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS10925 d62fea88e912d0661fbddd67fd62a714 423 PIRSF PIRSF001434 1 423 1.2E-125 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS10925 d62fea88e912d0661fbddd67fd62a714 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 420 1.3E-140 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 S40542_RS10735 5f6ede95ec8218bb8cf10ee2d64b3710 203 Gene3D G3DSA:2.30.30.60 123 170 7.4E-7 T 11-11-2016 S40542_RS10735 5f6ede95ec8218bb8cf10ee2d64b3710 203 Pfam PF00924 Mechanosensitive ion channel 63 169 9.5E-8 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 S40542_RS10735 5f6ede95ec8218bb8cf10ee2d64b3710 203 SUPERFAMILY SSF50182 107 170 5.89E-9 T 11-11-2016 IPR010920 LSM domain S40542_RS17395 264d7f1c0c73de15b943295812bccaec 232 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 208 3.1E-84 T 11-11-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 S40542_RS17395 264d7f1c0c73de15b943295812bccaec 232 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 1.7E-65 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 S40542_RS17395 264d7f1c0c73de15b943295812bccaec 232 PIRSF PIRSF006102 1 219 5.3E-79 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 S40542_RS17395 264d7f1c0c73de15b943295812bccaec 232 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.808 T 11-11-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 S40542_RS06320 6fd518322940b42257b41041784c601d 503 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS06320 6fd518322940b42257b41041784c601d 503 SUPERFAMILY SSF56801 4 498 2.75E-119 T 11-11-2016 S40542_RS06320 6fd518322940b42257b41041784c601d 503 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 492 1.4E-9 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS06320 6fd518322940b42257b41041784c601d 503 Pfam PF00501 AMP-binding enzyme 8 408 3.4E-81 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS06320 6fd518322940b42257b41041784c601d 503 Gene3D G3DSA:2.30.38.10 329 400 1.8E-21 T 11-11-2016 S40542_RS06320 6fd518322940b42257b41041784c601d 503 Gene3D G3DSA:3.30.300.30 404 499 1.3E-18 T 11-11-2016 S40542_RS06320 6fd518322940b42257b41041784c601d 503 Gene3D G3DSA:3.40.50.980 4 171 7.7E-29 T 11-11-2016 S40542_RS06320 6fd518322940b42257b41041784c601d 503 Gene3D G3DSA:3.40.50.980 172 328 4.7E-32 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 PRINTS PR00702 Acriflavin resistance protein family signature 348 371 2.4E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 2.4E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 2.4E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.4E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 2.4E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 SUPERFAMILY SSF82693 577 676 1.07E-7 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 Gene3D G3DSA:1.20.1640.10 304 520 3.4E-58 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 Gene3D G3DSA:3.30.70.1430 578 676 5.7E-4 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 SUPERFAMILY SSF82714 187 274 2.75E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 SUPERFAMILY SSF82693 142 186 8.37E-15 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 SUPERFAMILY SSF82693 297 342 8.37E-15 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 Gene3D G3DSA:3.30.70.1430 42 143 4.3E-24 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 Gene3D G3DSA:3.30.2090.10 187 274 2.9E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 Gene3D G3DSA:3.30.2090.10 734 818 4.4E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 Pfam PF00873 AcrB/AcrD/AcrF family 5 1037 1.2E-267 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1041 0.0 T 11-11-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 SUPERFAMILY SSF82866 818 1042 6.41E-52 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 SUPERFAMILY SSF82714 734 818 4.19E-19 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 SUPERFAMILY SSF82693 42 128 6.8E-20 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 Gene3D G3DSA:1.10.3850.10 824 1039 6.4E-58 T 11-11-2016 S40542_RS15080 b2365bb72ab0c1c0b8e46ae89284e6ad 1049 SUPERFAMILY SSF82866 308 515 2.49E-43 T 11-11-2016 S40542_RS08410 e5d33d095ae21d1ed9f98222b6ff85f8 295 SUPERFAMILY SSF90123 10 279 2.09E-14 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS08410 e5d33d095ae21d1ed9f98222b6ff85f8 295 Pfam PF13748 ABC transporter transmembrane region 11 243 2.6E-72 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS08410 e5d33d095ae21d1ed9f98222b6ff85f8 295 Gene3D G3DSA:1.20.1560.10 9 265 2.1E-9 T 11-11-2016 S40542_RS08765 2c1500db646838224828080d184f84ca 222 Gene3D G3DSA:1.10.10.10 144 221 3.5E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08765 2c1500db646838224828080d184f84ca 222 Gene3D G3DSA:3.40.50.2300 3 143 4.8E-39 T 11-11-2016 S40542_RS08765 2c1500db646838224828080d184f84ca 222 SUPERFAMILY SSF52172 3 126 3.7E-38 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08765 2c1500db646838224828080d184f84ca 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 219 1.9E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS08765 2c1500db646838224828080d184f84ca 222 SUPERFAMILY SSF46894 129 220 2.44E-25 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS08765 2c1500db646838224828080d184f84ca 222 Pfam PF00072 Response regulator receiver domain 5 113 7.2E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08765 2c1500db646838224828080d184f84ca 222 SMART SM00862 143 219 6.8E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS08765 2c1500db646838224828080d184f84ca 222 SMART SM00448 3 113 1.1E-38 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 Gene3D G3DSA:3.40.190.10 173 264 2.5E-19 T 11-11-2016 S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 Pfam PF03466 LysR substrate binding domain 88 273 6.9E-19 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 SUPERFAMILY SSF46785 1 86 1.74E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 7.3E-21 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 Gene3D G3DSA:3.40.190.10 93 172 1.9E-4 T 11-11-2016 S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 Gene3D G3DSA:1.10.10.10 1 84 1.8E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 SUPERFAMILY SSF53850 88 292 1.36E-19 T 11-11-2016 S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03155 1dccbb6e26f698235f4d8dde2375458b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 Gene3D G3DSA:3.30.559.10 258 495 1.3E-90 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 SUPERFAMILY SSF52777 269 496 4.45E-89 T 11-11-2016 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 Pfam PF02817 e3 binding domain 204 236 4.1E-15 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 129 158 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 Gene3D G3DSA:2.40.50.100 1 96 3.0E-24 T 11-11-2016 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 Gene3D G3DSA:2.40.50.100 103 196 2.7E-23 T 11-11-2016 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 Pfam PF00364 Biotin-requiring enzyme 4 76 5.2E-18 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 Pfam PF00364 Biotin-requiring enzyme 106 178 4.0E-15 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 SUPERFAMILY SSF47005 196 241 1.83E-12 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 105 497 7.0E-180 T 11-11-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 SUPERFAMILY SSF51230 105 196 8.38E-23 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 SUPERFAMILY SSF51230 1 96 4.71E-24 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 267 495 4.0E-81 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS12040 6ae5e03c8049eb60ebbb7ae4b2a6d618 497 Gene3D G3DSA:4.10.320.10 198 248 2.8E-20 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 Pfam PF00390 Malic enzyme, N-terminal domain 21 115 4.7E-20 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 Gene3D G3DSA:3.40.50.10380 7 159 1.0E-47 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 SUPERFAMILY SSF51735 162 408 1.28E-80 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 SMART SM00919 162 398 7.3E-137 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 PIRSF PIRSF000106 43 413 3.1E-72 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 11-11-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 SUPERFAMILY SSF53223 9 160 5.68E-51 T 11-11-2016 S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 Gene3D G3DSA:3.40.50.720 160 410 1.7E-85 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 SMART SM01274 17 150 9.3E-72 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 S40542_RS01325 41b351bd695e0ba311d12e29503b4fbb 413 Pfam PF03949 Malic enzyme, NAD binding domain 164 369 1.2E-26 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 PIRSF PIRSF000197 1 1263 0.0 T 11-11-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 SUPERFAMILY SSF81935 12 182 1.31E-60 T 11-11-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Gene3D G3DSA:3.40.605.10 561 797 4.0E-69 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Gene3D G3DSA:1.10.2060.10 61 181 2.0E-50 T 11-11-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 SUPERFAMILY SSF53720 1031 1197 2.09E-13 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Gene3D G3DSA:3.40.309.10 798 990 4.0E-45 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 67 180 6.2E-46 T 11-11-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 SUPERFAMILY SSF51730 183 526 9.02E-114 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Pfam PF01619 Proline dehydrogenase 191 482 3.2E-92 T 11-11-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Gene3D G3DSA:3.20.20.220 183 525 7.8E-103 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Pfam PF00171 Aldehyde dehydrogenase family 565 1004 8.4E-119 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Pfam PF00171 Aldehyde dehydrogenase family 1015 1184 1.7E-8 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 810 821 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 518 1007 2.6E-199 T 11-11-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 SUPERFAMILY SSF53720 556 1006 7.33E-125 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 S40542_RS17850 64d034d4b09943139b28c385858a23cd 1267 Gene3D G3DSA:3.40.605.10 1024 1199 7.0E-11 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 S40542_RS12535 d22a866ffdc6671535604523607b511c 158 Pfam PF04982 HPP family 33 147 8.0E-34 T 11-11-2016 IPR007065 HPP S40542_RS11040 0face7a97c665c52b698cd90e959f3ba 209 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 195 3.8E-36 T 11-11-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like S40542_RS11040 0face7a97c665c52b698cd90e959f3ba 209 SUPERFAMILY SSF89392 25 205 3.92E-40 T 11-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX S40542_RS11040 0face7a97c665c52b698cd90e959f3ba 209 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 12 205 24.009 T 11-11-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 S40542_RS11040 0face7a97c665c52b698cd90e959f3ba 209 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 205 5.4E-39 T 11-11-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 S40542_RS11040 0face7a97c665c52b698cd90e959f3ba 209 Gene3D G3DSA:2.50.20.10 25 205 3.8E-43 T 11-11-2016 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 Gene3D G3DSA:3.30.2090.10 180 263 7.2E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 SUPERFAMILY SSF82693 39 128 3.14E-13 T 11-11-2016 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 Gene3D G3DSA:1.20.1640.10 283 486 3.1E-37 T 11-11-2016 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 SUPERFAMILY SSF82714 180 262 9.68E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 SUPERFAMILY SSF82866 801 1028 4.84E-47 T 11-11-2016 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 1.2E-145 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 Gene3D G3DSA:3.30.70.1430 40 135 3.5E-14 T 11-11-2016 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 SUPERFAMILY SSF82866 295 484 3.27E-31 T 11-11-2016 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 SUPERFAMILY SSF82714 731 803 8.37E-5 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 5.3E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 5.3E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 434 457 5.3E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.3E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.3E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 5.3E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08530 7e33c99cafa14a1c861fc5cdf6a0998a 1043 Gene3D G3DSA:1.10.3850.10 809 1027 2.3E-55 T 11-11-2016 S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 Pfam PF00801 PKD domain 419 478 4.7E-13 T 11-11-2016 IPR000601 PKD domain S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 Gene3D G3DSA:2.40.10.10 194 281 4.5E-5 T 11-11-2016 S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 Gene3D G3DSA:2.10.10.20 492 538 3.2E-14 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 SUPERFAMILY SSF49299 408 486 5.36E-21 T 11-11-2016 IPR000601 PKD domain S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 SMART SM00495 494 540 1.3E-7 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 Gene3D G3DSA:2.60.40.670 409 488 1.3E-23 T 11-11-2016 IPR000601 PKD domain S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 SUPERFAMILY SSF51055 492 543 5.1E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 SMART SM00089 412 489 1.1E-20 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 Pfam PF13365 Trypsin-like peptidase domain 204 364 1.0E-11 T 11-11-2016 S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 Pfam PF02839 Carbohydrate binding domain 496 534 4.1E-10 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 Gene3D G3DSA:2.40.10.10 282 376 2.3E-11 T 11-11-2016 S40542_RS07210 c9d1fdcb1a26dd3bcb5711fcc1a02e17 544 SUPERFAMILY SSF50494 188 378 3.67E-22 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS19850 34b2e4ea1ff5c3229f31ffd3b613f91e 199 SUPERFAMILY SSF52016 3 192 3.73E-52 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel S40542_RS19850 34b2e4ea1ff5c3229f31ffd3b613f91e 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 36.802 T 11-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 S40542_RS19850 34b2e4ea1ff5c3229f31ffd3b613f91e 199 Gene3D G3DSA:3.20.19.10 5 166 7.8E-38 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel S40542_RS19850 34b2e4ea1ff5c3229f31ffd3b613f91e 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 185 6.3E-67 T 11-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 S40542_RS19850 34b2e4ea1ff5c3229f31ffd3b613f91e 199 Pfam PF00694 Aconitase C-terminal domain 6 120 1.9E-30 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS13880 7600ccebb742f7fc2ab5ff4e9c937cbb 535 Gene3D G3DSA:3.90.226.10 280 530 6.8E-92 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13880 7600ccebb742f7fc2ab5ff4e9c937cbb 535 Gene3D G3DSA:3.90.226.10 28 274 1.9E-81 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13880 7600ccebb742f7fc2ab5ff4e9c937cbb 535 SUPERFAMILY SSF52096 237 518 4.07E-87 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13880 7600ccebb742f7fc2ab5ff4e9c937cbb 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.5E-154 T 11-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS13880 7600ccebb742f7fc2ab5ff4e9c937cbb 535 SUPERFAMILY SSF52096 20 271 8.82E-74 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Pfam PF02225 PA domain 346 427 6.5E-10 T 11-11-2016 IPR003137 PA domain S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Gene3D G3DSA:2.60.40.670 522 604 2.4E-16 T 11-11-2016 IPR000601 PKD domain S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 PRINTS PR00723 Subtilisin serine protease family (S8) signature 168 181 8.4E-17 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 PRINTS PR00723 Subtilisin serine protease family (S8) signature 449 465 8.4E-17 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 PRINTS PR00723 Subtilisin serine protease family (S8) signature 130 149 8.4E-17 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Gene3D G3DSA:3.50.30.30 312 436 8.5E-30 T 11-11-2016 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Pfam PF00082 Subtilase family 134 320 1.9E-29 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Pfam PF00082 Subtilase family 435 500 1.0E-12 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 SUPERFAMILY SSF49299 522 603 1.03E-16 T 11-11-2016 IPR000601 PKD domain S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Gene3D G3DSA:2.10.10.20 610 665 2.0E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Pfam PF00801 PKD domain 539 592 6.9E-11 T 11-11-2016 IPR000601 PKD domain S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 SMART SM00495 613 662 6.5E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 SUPERFAMILY SSF51055 609 665 3.14E-10 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 450 460 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Pfam PF02839 Carbohydrate binding domain 615 657 1.8E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 SUPERFAMILY SSF52743 114 511 5.57E-80 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 SMART SM00089 526 604 1.5E-15 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Gene3D G3DSA:3.40.50.200 78 311 3.4E-79 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 Gene3D G3DSA:3.40.50.200 437 510 3.4E-79 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS10970 7bcc8e04d228d648485eae8086bd65de 666 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 172 182 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 1.4E-57 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 SUPERFAMILY SSF52467 184 342 9.33E-51 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 SUPERFAMILY SSF52518 356 545 4.24E-65 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 3.4E-207 T 11-11-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 319 3.2E-38 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 SUPERFAMILY SSF52518 1 171 1.83E-62 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 521 3.7E-48 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 Gene3D G3DSA:3.40.50.970 1 170 1.2E-74 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 Gene3D G3DSA:3.40.50.970 335 537 3.7E-71 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS01455 b6fc6775acb379c231b8a7f1a6ec0c2f 549 Gene3D G3DSA:3.40.50.1220 186 334 6.3E-51 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.8E-60 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 Gene3D G3DSA:3.40.50.720 2 160 3.8E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 PIRSF PIRSF000149 1 334 1.0E-118 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 SMART SM00846 3 152 3.6E-60 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 SUPERFAMILY SSF51735 1 180 2.03E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 SUPERFAMILY SSF55347 152 314 8.93E-65 T 11-11-2016 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 2.8E-46 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.2E-115 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 Gene3D G3DSA:3.30.360.10 161 315 4.1E-68 T 11-11-2016 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 4.6E-28 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 4.6E-28 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 4.6E-28 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 4.6E-28 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS13925 d1622d7a414eeb5ada5cde48c1d3a90f 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 4.6E-28 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.2E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.2E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.2E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 204 4.7E-20 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 SUPERFAMILY SSF52172 2 131 1.85E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 SUPERFAMILY SSF46894 134 211 3.4E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 SMART SM00421 147 204 2.5E-18 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 Gene3D G3DSA:1.10.10.10 120 212 1.0E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 Gene3D G3DSA:3.40.50.2300 2 119 6.4E-35 T 11-11-2016 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 Pfam PF00072 Response regulator receiver domain 4 116 4.4E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15325 43c5a659a74e8be115fe176f70470309 216 SMART SM00448 2 115 7.6E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10755 68b618fb9b20ddea13074087f1e4b1c8 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.205 T 11-11-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK S40542_RS10755 68b618fb9b20ddea13074087f1e4b1c8 301 SUPERFAMILY SSF56059 98 288 2.42E-50 T 11-11-2016 S40542_RS10755 68b618fb9b20ddea13074087f1e4b1c8 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 5.5E-68 T 11-11-2016 IPR013651 ATP-grasp fold, RimK-type S40542_RS10755 68b618fb9b20ddea13074087f1e4b1c8 301 Gene3D G3DSA:3.30.1490.20 103 171 6.5E-7 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS10755 68b618fb9b20ddea13074087f1e4b1c8 301 Gene3D G3DSA:3.30.470.20 172 277 9.3E-38 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS10755 68b618fb9b20ddea13074087f1e4b1c8 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.3E-87 T 11-11-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 S40542_RS10755 68b618fb9b20ddea13074087f1e4b1c8 301 Gene3D G3DSA:3.40.50.20 8 102 2.6E-18 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:2.30.38.10 1923 2002 6.6E-20 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:2.30.38.10 863 940 4.0E-22 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:2.30.38.10 3473 3547 7.5E-21 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF47336 1056 1130 2.36E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF56801 1580 2112 2.62E-127 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF52777 2869 3114 1.56E-35 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.30.300.30 946 1065 5.4E-30 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.30.300.30 3554 3671 3.7E-32 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF52777 269 517 2.22E-44 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF53474 3742 4004 9.62E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3304 3315 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF13193 AMP-binding enzyme C-terminal domain 959 1036 4.2E-11 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF13193 AMP-binding enzyme C-terminal domain 3567 3640 2.9E-8 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF13193 AMP-binding enzyme C-terminal domain 2021 2098 3.4E-6 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF56801 505 1074 3.53E-150 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.40.50.1820 3743 3863 3.4E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.40.50.1820 3942 3997 3.4E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF52777 2404 2650 6.45E-24 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.40.50.980 3314 3472 1.7E-40 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.40.50.980 1770 1915 7.2E-35 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.40.50.980 693 862 3.8E-48 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF47336 2127 2197 1.02E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.40.50.980 3147 3313 2.0E-34 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00668 Condensation domain 2685 2983 2.6E-57 T 11-11-2016 IPR001242 Condensation domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00668 Condensation domain 78 379 2.6E-58 T 11-11-2016 IPR001242 Condensation domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00668 Condensation domain 2219 2512 1.8E-37 T 11-11-2016 IPR001242 Condensation domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00668 Condensation domain 1149 1453 1.6E-56 T 11-11-2016 IPR001242 Condensation domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF52777 1151 1355 6.34E-37 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF52777 1345 1583 4.22E-49 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF52777 82 260 1.56E-35 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:1.10.1200.10 1066 1132 8.1E-19 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:1.10.1200.10 3672 3736 3.2E-21 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:1.10.1200.10 2121 2199 9.2E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1640 2037 1.3E-115 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3182 3582 4.2E-118 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 568 975 4.3E-134 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00550 Phosphopantetheine attachment site 2134 2196 1.8E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00550 Phosphopantetheine attachment site 1067 1129 4.2E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00550 Phosphopantetheine attachment site 3672 3733 1.1E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF52777 2223 2394 3.89E-23 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF47336 3662 3734 4.32E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2156 2171 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF13745 HxxPF-repeated domain 403 494 1.1E-19 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF13745 HxxPF-repeated domain 1476 1564 1.0E-18 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.40.50.980 1626 1769 1.3E-40 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.40.50.980 539 692 1.1E-47 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00975 Thioesterase domain 3762 4008 3.1E-6 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF52777 2683 2883 2.22E-42 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00501 AMP-binding enzyme 1627 2013 2.4E-85 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00501 AMP-binding enzyme 3161 3558 3.4E-81 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Pfam PF00501 AMP-binding enzyme 557 951 3.2E-94 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1763 1774 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 ProSitePatterns PS00455 Putative AMP-binding domain signature. 687 698 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 Gene3D G3DSA:3.30.300.30 2007 2109 1.1E-29 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SUPERFAMILY SSF56801 3147 3657 3.27E-130 T 11-11-2016 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SMART SM00823 Phosphopantetheine attachment site 2132 2200 6.2E-4 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SMART SM00823 Phosphopantetheine attachment site 1062 1133 0.0057 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS01790 7326c2ff37a059e6bddd952b790961bb 4015 SMART SM00823 Phosphopantetheine attachment site 3665 3737 2.0E-5 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS17895 3a28cb1ac9631e30c04df5773868719b 78 SMART SM00530 13 68 2.7E-4 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS17895 3a28cb1ac9631e30c04df5773868719b 78 SUPERFAMILY SSF47413 8 69 6.14E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS17895 3a28cb1ac9631e30c04df5773868719b 78 Pfam PF13560 Helix-turn-helix domain 11 67 2.4E-6 T 11-11-2016 S40542_RS17895 3a28cb1ac9631e30c04df5773868719b 78 Gene3D G3DSA:1.10.260.40 10 70 1.4E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 Gene3D G3DSA:1.20.1640.10 303 486 1.8E-40 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 Gene3D G3DSA:3.30.70.1430 46 136 5.0E-10 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 SUPERFAMILY SSF82693 149 181 1.48E-8 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 SUPERFAMILY SSF82693 268 324 1.48E-8 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.7E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 4.7E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.7E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 4.7E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.7E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 SUPERFAMILY SSF82714 718 790 3.53E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 Gene3D G3DSA:3.30.2090.10 181 267 8.2E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 SUPERFAMILY SSF82866 792 1017 1.31E-43 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 Pfam PF00873 AcrB/AcrD/AcrF family 8 1015 3.4E-151 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 SUPERFAMILY SSF82866 292 486 1.31E-36 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 SUPERFAMILY SSF82714 182 265 8.24E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 Gene3D G3DSA:3.30.2090.10 710 788 2.5E-7 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 SUPERFAMILY SSF82693 47 133 1.67E-8 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 Gene3D G3DSA:1.10.3850.10 798 1016 7.4E-49 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 Gene3D G3DSA:3.30.70.1320 270 302 1.8E-4 T 11-11-2016 S40542_RS07270 67a5294ac22a338c46dfd90000e8ef51 1034 Gene3D G3DSA:3.30.70.1320 160 178 1.8E-4 T 11-11-2016 S40542_RS01545 f545ee23ca58e062e985ad4d81238199 216 Pfam PF13489 Methyltransferase domain 68 202 1.1E-21 T 11-11-2016 S40542_RS01545 f545ee23ca58e062e985ad4d81238199 216 Gene3D G3DSA:3.40.50.150 79 208 4.2E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01545 f545ee23ca58e062e985ad4d81238199 216 SUPERFAMILY SSF53335 52 204 1.21E-18 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS19150 7e8cb83a27232366c847e92b9d14f06c 129 SUPERFAMILY SSF54637 3 127 4.22E-33 T 11-11-2016 IPR029069 HotDog domain S40542_RS19150 7e8cb83a27232366c847e92b9d14f06c 129 Gene3D G3DSA:3.10.129.10 4 128 1.4E-35 T 11-11-2016 IPR029069 HotDog domain S40542_RS19150 7e8cb83a27232366c847e92b9d14f06c 129 Pfam PF13279 Thioesterase-like superfamily 10 110 5.7E-8 T 11-11-2016 S40542_RS15850 7ed98496f23f161d151295a23ed70c9e 426 Pfam PF00571 CBS domain 276 325 1.3E-4 T 11-11-2016 IPR000644 CBS domain S40542_RS15850 7ed98496f23f161d151295a23ed70c9e 426 SMART SM01091 341 419 2.7E-21 T 11-11-2016 IPR005170 Transporter-associated domain S40542_RS15850 7ed98496f23f161d151295a23ed70c9e 426 SUPERFAMILY SSF54631 191 328 1.39E-26 T 11-11-2016 S40542_RS15850 7ed98496f23f161d151295a23ed70c9e 426 Gene3D G3DSA:3.30.465.10 318 417 2.0E-23 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 S40542_RS15850 7ed98496f23f161d151295a23ed70c9e 426 Pfam PF03471 Transporter associated domain 342 416 9.3E-17 T 11-11-2016 IPR005170 Transporter-associated domain S40542_RS15850 7ed98496f23f161d151295a23ed70c9e 426 Gene3D G3DSA:3.10.580.10 192 317 3.1E-14 T 11-11-2016 S40542_RS15850 7ed98496f23f161d151295a23ed70c9e 426 Pfam PF01595 Domain of unknown function DUF21 14 182 2.3E-47 T 11-11-2016 IPR002550 Domain of unknown function DUF21 S40542_RS15850 7ed98496f23f161d151295a23ed70c9e 426 SUPERFAMILY SSF56176 339 423 6.0E-21 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 SUPERFAMILY SSF52540 137 170 4.53E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 SUPERFAMILY SSF52540 200 464 4.53E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 PIRSF PIRSF006485 1 466 1.3E-180 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 Pfam PF01926 50S ribosome-binding GTPase 205 322 9.6E-25 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 Pfam PF01926 50S ribosome-binding GTPase 5 119 7.7E-29 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 SMART SM00382 1 141 0.88 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 SMART SM00382 201 348 0.57 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 4.9E-26 T 11-11-2016 IPR032859 GTPase Der, C-terminal KH-domain-like S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 201 365 1.6E-22 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 8.7E-24 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 SUPERFAMILY SSF52540 4 159 4.94E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.0E-9 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.0E-9 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 Gene3D G3DSA:3.30.300.20 384 459 2.7E-24 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 458 3.8E-178 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 Hamap MF_00195 GTPase Der [der]. 2 461 38.988 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 Gene3D G3DSA:3.40.50.300 201 383 1.0E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04025 b12cb53effa8c00b3d928a653e27036e 490 Gene3D G3DSA:3.40.50.300 3 158 8.2E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07165 bef15bfc10047e974a21faae6858e570 677 Gene3D G3DSA:1.10.1370.10 503 676 1.6E-109 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 S40542_RS07165 bef15bfc10047e974a21faae6858e570 677 Gene3D G3DSA:1.10.1370.10 145 350 1.6E-109 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 S40542_RS07165 bef15bfc10047e974a21faae6858e570 677 SUPERFAMILY SSF55486 12 675 1.87E-183 T 11-11-2016 S40542_RS07165 bef15bfc10047e974a21faae6858e570 677 Pfam PF01432 Peptidase family M3 229 675 2.8E-115 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 S40542_RS07165 bef15bfc10047e974a21faae6858e570 677 Gene3D G3DSA:1.20.1050.40 11 144 1.2E-26 T 11-11-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal S40542_RS07165 bef15bfc10047e974a21faae6858e570 677 Gene3D G3DSA:3.40.390.10 360 502 1.2E-47 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS04815 7b8bfe0dc9a3fd7b5b69deadf40f6df5 116 Pfam PF02152 Dihydroneopterin aldolase 4 112 2.0E-30 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS04815 7b8bfe0dc9a3fd7b5b69deadf40f6df5 116 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 113 6.9E-25 T 11-11-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS04815 7b8bfe0dc9a3fd7b5b69deadf40f6df5 116 SMART SM00905 4 114 9.8E-39 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS04815 7b8bfe0dc9a3fd7b5b69deadf40f6df5 116 SUPERFAMILY SSF55620 1 115 1.45E-31 T 11-11-2016 S40542_RS04815 7b8bfe0dc9a3fd7b5b69deadf40f6df5 116 Gene3D G3DSA:3.30.1130.10 1 115 6.5E-37 T 11-11-2016 S40542_RS04815 7b8bfe0dc9a3fd7b5b69deadf40f6df5 116 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 9.2E-31 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS18525 c7b235f9a4e54ee8cf5e10d5d355e318 311 Pfam PF00551 Formyl transferase 51 170 4.0E-20 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS18525 c7b235f9a4e54ee8cf5e10d5d355e318 311 SUPERFAMILY SSF53328 6 202 2.22E-38 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS18525 c7b235f9a4e54ee8cf5e10d5d355e318 311 SUPERFAMILY SSF50486 206 306 3.77E-20 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 S40542_RS18525 c7b235f9a4e54ee8cf5e10d5d355e318 311 Pfam PF02911 Formyl transferase, C-terminal domain 206 300 1.8E-18 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS18525 c7b235f9a4e54ee8cf5e10d5d355e318 311 Gene3D G3DSA:3.40.50.170 6 203 1.5E-36 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS18525 c7b235f9a4e54ee8cf5e10d5d355e318 311 Gene3D G3DSA:3.10.25.10 208 306 2.2E-20 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 SMART SM00490 506 590 3.9E-25 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 SUPERFAMILY SSF50249 8 176 9.42E-39 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 Gene3D G3DSA:3.40.50.300 455 639 6.7E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 Pfam PF00271 Helicase conserved C-terminal domain 481 589 4.2E-21 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 SMART SM00487 266 460 4.3E-32 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 SUPERFAMILY SSF52540 453 655 5.43E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 Gene3D G3DSA:1.10.150.20 6 37 7.0E-6 T 11-11-2016 S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 8.8E-233 T 11-11-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 Gene3D G3DSA:2.40.50.140 47 140 8.7E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 Pfam PF17191 RecG wedge domain 12 172 3.5E-21 T 11-11-2016 IPR033454 RecG, wedge domain S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 SUPERFAMILY SSF52540 207 454 4.96E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 Pfam PF00270 DEAD/DEAH box helicase 294 434 7.2E-18 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS03345 126344b3a9962cb5ebb56e73ab910ccd 694 Gene3D G3DSA:3.40.50.300 255 454 1.8E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02075 69463658a12ea14588404a79c4ce7d7e 514 SUPERFAMILY SSF52540 122 510 3.78E-103 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02075 69463658a12ea14588404a79c4ce7d7e 514 Pfam PF00437 Type II/IV secretion system protein 139 405 1.4E-88 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 S40542_RS02075 69463658a12ea14588404a79c4ce7d7e 514 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 29 510 2.5E-218 T 11-11-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 S40542_RS02075 69463658a12ea14588404a79c4ce7d7e 514 SMART SM00382 266 389 4.7E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS02075 69463658a12ea14588404a79c4ce7d7e 514 SUPERFAMILY SSF160246 28 92 2.09E-15 T 11-11-2016 S40542_RS02075 69463658a12ea14588404a79c4ce7d7e 514 Gene3D G3DSA:3.40.50.300 244 511 6.7E-99 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02075 69463658a12ea14588404a79c4ce7d7e 514 Gene3D G3DSA:3.30.450.90 108 238 8.1E-54 T 11-11-2016 S40542_RS02075 69463658a12ea14588404a79c4ce7d7e 514 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 333 347 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 S40542_RS20745 b886c5e6ceae489fd9402443db6a24e1 206 SUPERFAMILY SSF53335 3 205 9.53E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS20745 b886c5e6ceae489fd9402443db6a24e1 206 Gene3D G3DSA:3.40.50.150 4 205 3.0E-68 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS20745 b886c5e6ceae489fd9402443db6a24e1 206 Pfam PF02527 rRNA small subunit methyltransferase G 21 201 5.7E-61 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 S40542_RS20745 b886c5e6ceae489fd9402443db6a24e1 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 205 1.9E-55 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 S40542_RS20745 b886c5e6ceae489fd9402443db6a24e1 206 PIRSF PIRSF003078 2 206 1.6E-60 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 S40542_RS20745 b886c5e6ceae489fd9402443db6a24e1 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 202 27.587 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 S40542_RS19595 1070b07e5c3653284fa6c14519ea8af5 564 SUPERFAMILY SSF116726 281 340 1.83E-14 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS19595 1070b07e5c3653284fa6c14519ea8af5 564 Pfam PF03600 Citrate transporter 22 509 1.7E-25 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 S40542_RS19595 1070b07e5c3653284fa6c14519ea8af5 564 Pfam PF02080 TrkA-C domain 283 339 2.4E-11 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS19595 1070b07e5c3653284fa6c14519ea8af5 564 Pfam PF02080 TrkA-C domain 201 266 3.8E-7 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS19595 1070b07e5c3653284fa6c14519ea8af5 564 SUPERFAMILY SSF116726 198 273 1.7E-13 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS19595 1070b07e5c3653284fa6c14519ea8af5 564 Gene3D G3DSA:3.30.70.1450 281 339 7.2E-17 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS19595 1070b07e5c3653284fa6c14519ea8af5 564 Gene3D G3DSA:3.30.70.1450 200 276 1.2E-14 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 Pfam PF00072 Response regulator receiver domain 12 125 6.0E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 Pfam PF00072 Response regulator receiver domain 153 264 8.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 SUPERFAMILY SSF55874 346 505 6.55E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 Gene3D G3DSA:3.40.50.2300 7 131 5.3E-29 T 11-11-2016 S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 Gene3D G3DSA:3.40.50.2300 146 270 4.7E-40 T 11-11-2016 S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 Gene3D G3DSA:3.30.565.10 332 505 4.1E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 SMART SM00387 401 506 4.3E-4 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 SUPERFAMILY SSF52172 152 275 3.27E-36 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 504 1.2E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 SMART SM00448 10 125 1.1E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 SMART SM00448 151 264 2.4E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03080 15c68b6b5320e7b23ac3291700df4304 506 SUPERFAMILY SSF52172 6 133 8.25E-27 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS00535 fc5f1ee84f500c39f441be6f54eca5c5 335 Pfam PF01008 Initiation factor 2 subunit family 47 327 1.6E-67 T 11-11-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 S40542_RS00535 fc5f1ee84f500c39f441be6f54eca5c5 335 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 33 327 6.5E-94 T 11-11-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 S40542_RS00535 fc5f1ee84f500c39f441be6f54eca5c5 335 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 7 328 3.8E-120 T 11-11-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 S40542_RS00535 fc5f1ee84f500c39f441be6f54eca5c5 335 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 335 35.189 T 11-11-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 S40542_RS00535 fc5f1ee84f500c39f441be6f54eca5c5 335 Gene3D G3DSA:1.20.120.420 7 145 9.1E-41 T 11-11-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 S40542_RS00535 fc5f1ee84f500c39f441be6f54eca5c5 335 SUPERFAMILY SSF100950 7 331 9.3E-107 T 11-11-2016 S40542_RS00535 fc5f1ee84f500c39f441be6f54eca5c5 335 Gene3D G3DSA:3.40.50.10470 146 329 1.3E-64 T 11-11-2016 S40542_RS08030 d6cc9da83365833d0eace02d0dbeee6f 499 Pfam PF00171 Aldehyde dehydrogenase family 13 478 5.2E-51 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 S40542_RS08030 d6cc9da83365833d0eace02d0dbeee6f 499 Gene3D G3DSA:3.40.605.10 4 270 2.9E-45 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 S40542_RS08030 d6cc9da83365833d0eace02d0dbeee6f 499 SUPERFAMILY SSF53720 20 496 6.68E-91 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 S40542_RS08030 d6cc9da83365833d0eace02d0dbeee6f 499 Gene3D G3DSA:3.40.309.10 271 456 6.6E-39 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 S40542_RS02520 6d6c46da34171dde9f5888144a49bb28 315 SUPERFAMILY SSF52283 1 119 4.54E-27 T 11-11-2016 S40542_RS02520 6d6c46da34171dde9f5888144a49bb28 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 315 4.6E-22 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 S40542_RS02520 6d6c46da34171dde9f5888144a49bb28 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 284 1.9E-50 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 S40542_RS02520 6d6c46da34171dde9f5888144a49bb28 315 Gene3D G3DSA:3.40.50.720 1 108 4.8E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS02520 6d6c46da34171dde9f5888144a49bb28 315 SUPERFAMILY SSF51735 97 285 1.94E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS02520 6d6c46da34171dde9f5888144a49bb28 315 Gene3D G3DSA:3.40.50.720 109 287 4.7E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 PRINTS PR01591 DNA-binding protein FIS signature 40 55 4.8E-17 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 PRINTS PR01591 DNA-binding protein FIS signature 24 40 4.8E-17 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 PRINTS PR01591 DNA-binding protein FIS signature 7 24 4.8E-17 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 PRINTS PR01591 DNA-binding protein FIS signature 55 67 4.8E-17 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 Pfam PF02954 Bacterial regulatory protein, Fis family 53 93 4.7E-15 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 SUPERFAMILY SSF46689 14 96 1.02E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 76 96 1.1E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 59 76 1.1E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 PIRSF PIRSF002097 1 96 3.9E-40 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 S40542_RS18035 94e7cd49f8a2c144d8ec9078d3ec9fdd 96 Gene3D G3DSA:1.10.10.60 25 96 7.2E-27 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS14735 32ef3162b727699555f5194ce0c4948f 558 SUPERFAMILY SSF52540 283 498 1.48E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14735 32ef3162b727699555f5194ce0c4948f 558 SUPERFAMILY SSF52540 2 50 1.48E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14735 32ef3162b727699555f5194ce0c4948f 558 Gene3D G3DSA:3.40.50.300 387 497 8.1E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14735 32ef3162b727699555f5194ce0c4948f 558 SUPERFAMILY SSF52540 1 218 9.69E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14735 32ef3162b727699555f5194ce0c4948f 558 Gene3D G3DSA:3.40.50.300 1 207 6.2E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14735 32ef3162b727699555f5194ce0c4948f 558 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 5.9E-170 T 11-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 S40542_RS14735 32ef3162b727699555f5194ce0c4948f 558 PIRSF PIRSF003128 1 558 4.2E-166 T 11-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 S40542_RS14735 32ef3162b727699555f5194ce0c4948f 558 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 508 5.6E-21 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal S40542_RS11705 8e006c45e3d92903cabe2e92c0e54424 745 SUPERFAMILY SSF56935 24 745 1.94E-94 T 11-11-2016 S40542_RS11705 8e006c45e3d92903cabe2e92c0e54424 745 Gene3D G3DSA:2.170.130.10 26 160 1.5E-26 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS11705 8e006c45e3d92903cabe2e92c0e54424 745 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 2.9E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS11705 8e006c45e3d92903cabe2e92c0e54424 745 Gene3D G3DSA:2.40.170.20 163 745 5.5E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS13700 94662e3edb4315310d0081aada66cce7 397 SUPERFAMILY SSF52743 179 385 5.63E-26 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS13700 94662e3edb4315310d0081aada66cce7 397 Pfam PF00082 Subtilase family 204 391 1.3E-12 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS13700 94662e3edb4315310d0081aada66cce7 397 Gene3D G3DSA:3.40.50.200 176 384 2.3E-25 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS03065 3d9071b6783f8642501c570105488651 289 Gene3D G3DSA:3.40.190.10 173 238 6.0E-4 T 11-11-2016 S40542_RS03065 3d9071b6783f8642501c570105488651 289 SUPERFAMILY SSF53850 90 287 2.53E-25 T 11-11-2016 S40542_RS03065 3d9071b6783f8642501c570105488651 289 Gene3D G3DSA:1.10.10.10 3 87 3.9E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03065 3d9071b6783f8642501c570105488651 289 Pfam PF03466 LysR substrate binding domain 89 284 2.8E-24 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS03065 3d9071b6783f8642501c570105488651 289 Gene3D G3DSA:3.40.190.10 92 172 2.1E-14 T 11-11-2016 S40542_RS03065 3d9071b6783f8642501c570105488651 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03065 3d9071b6783f8642501c570105488651 289 SUPERFAMILY SSF46785 3 112 6.15E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 SUPERFAMILY SSF58104 318 626 1.7E-76 T 11-11-2016 S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 Pfam PF02743 Cache domain 33 258 3.0E-33 T 11-11-2016 IPR033479 Double Cache domain 1 S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 SUPERFAMILY SSF103190 50 181 7.85E-13 T 11-11-2016 IPR029151 Periplasmic sensor domain-like S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 SMART SM00304 296 350 2.1E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 Gene3D G3DSA:3.30.450.20 139 273 8.4E-32 T 11-11-2016 S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 Gene3D G3DSA:1.10.287.950 382 596 3.7E-56 T 11-11-2016 S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 625 6.4E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 SMART SM00283 365 626 2.8E-70 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS15125 405b2989e331e926a2089214f5605ba4 627 Pfam PF00672 HAMP domain 277 346 8.1E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS12525 3477e804ac5f20dde04735bce0b29736 279 SUPERFAMILY SSF46785 3 83 3.86E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS12525 3477e804ac5f20dde04735bce0b29736 279 Gene3D G3DSA:3.40.190.10 91 141 2.6E-9 T 11-11-2016 S40542_RS12525 3477e804ac5f20dde04735bce0b29736 279 Gene3D G3DSA:3.40.190.10 182 242 1.0E-4 T 11-11-2016 S40542_RS12525 3477e804ac5f20dde04735bce0b29736 279 SUPERFAMILY SSF53850 92 277 4.34E-10 T 11-11-2016 S40542_RS12525 3477e804ac5f20dde04735bce0b29736 279 Gene3D G3DSA:1.10.10.10 1 82 5.5E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS12525 3477e804ac5f20dde04735bce0b29736 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 8.5E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 PIRSF PIRSF036565 1 551 9.7E-119 T 11-11-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 535 9.7E-26 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 Gene3D G3DSA:3.40.50.970 356 545 8.1E-43 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 Gene3D G3DSA:3.40.50.1220 197 337 6.1E-36 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 SUPERFAMILY SSF52467 172 333 3.97E-27 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 181 8.0E-30 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 SUPERFAMILY SSF52518 372 543 5.36E-38 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 Gene3D G3DSA:3.40.50.970 4 184 5.6E-53 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 SUPERFAMILY SSF52518 5 181 1.3E-31 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS14065 e1eee17d49d91f3e5db2b856e40dbc64 551 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 328 3.4E-20 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 S40542_RS07020 619452eac6347ff8fdd5622356b0a30e 395 Gene3D G3DSA:3.30.450.40 18 175 2.7E-10 T 11-11-2016 IPR029016 GAF domain-like S40542_RS07020 619452eac6347ff8fdd5622356b0a30e 395 Pfam PF00990 Diguanylate cyclase, GGDEF domain 233 390 5.2E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07020 619452eac6347ff8fdd5622356b0a30e 395 SMART SM00267 221 394 7.1E-66 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07020 619452eac6347ff8fdd5622356b0a30e 395 SUPERFAMILY SSF55073 237 393 1.73E-46 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS07020 619452eac6347ff8fdd5622356b0a30e 395 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 394 2.6E-46 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07020 619452eac6347ff8fdd5622356b0a30e 395 SUPERFAMILY SSF55781 16 176 2.84E-12 T 11-11-2016 IPR029016 GAF domain-like S40542_RS07020 619452eac6347ff8fdd5622356b0a30e 395 Gene3D G3DSA:3.30.70.270 234 393 8.8E-54 T 11-11-2016 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 309 371 6.7E-16 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Pfam PF01584 CheW-like domain 564 690 6.8E-23 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Gene3D G3DSA:1.20.120.160 2 140 3.3E-39 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 SMART SM00387 416 557 4.0E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Gene3D G3DSA:3.30.565.10 373 556 6.2E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Gene3D G3DSA:2.40.50.180 580 644 4.4E-13 T 11-11-2016 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 SMART SM01231 307 371 1.1E-18 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 SMART SM00073 5 102 1.9E-28 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 SMART SM00260 549 689 1.0E-38 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 SUPERFAMILY SSF55874 374 555 3.14E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 SUPERFAMILY SSF47226 5 129 6.41E-33 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Gene3D G3DSA:1.10.287.560 308 372 2.0E-19 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Gene3D G3DSA:2.30.30.40 645 689 4.4E-22 T 11-11-2016 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Gene3D G3DSA:2.30.30.40 557 578 4.4E-22 T 11-11-2016 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Pfam PF01627 Hpt domain 8 99 1.1E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 SUPERFAMILY SSF47384 308 372 1.77E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 556 1.4E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 SUPERFAMILY SSF50341 556 689 7.46E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 1.1E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 1.1E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 1.1E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01960 c63c76dbbb50b864ebf1ae3552721e6d 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 1.1E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 Gene3D G3DSA:3.10.580.10 152 270 4.1E-32 T 11-11-2016 S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 Gene3D G3DSA:2.60.120.10 20 140 1.4E-8 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 SUPERFAMILY SSF51206 20 137 1.31E-10 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 SUPERFAMILY SSF54631 150 270 1.06E-29 T 11-11-2016 S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 Pfam PF03445 Putative nucleotidyltransferase DUF294 298 434 3.6E-42 T 11-11-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 609 1.1E-37 T 11-11-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 Pfam PF00571 CBS domain 218 271 1.3E-8 T 11-11-2016 IPR000644 CBS domain S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 Pfam PF00571 CBS domain 157 207 1.3E-9 T 11-11-2016 IPR000644 CBS domain S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 SMART SM00116 161 208 1.9E-7 T 11-11-2016 IPR000644 CBS domain S40542_RS03565 16a2a43a3e578ca1bcd16f166886378b 615 SMART SM00116 225 273 0.0023 T 11-11-2016 IPR000644 CBS domain S40542_RS05735 419967f4881a707209d44fa1306b643b 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 323 34.867 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 S40542_RS05735 419967f4881a707209d44fa1306b643b 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 318 5.1E-106 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 S40542_RS05735 419967f4881a707209d44fa1306b643b 330 SUPERFAMILY SSF53659 3 325 2.03E-113 T 11-11-2016 S40542_RS05735 419967f4881a707209d44fa1306b643b 330 Gene3D G3DSA:3.40.718.10 3 325 9.8E-131 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 S40542_RS05735 419967f4881a707209d44fa1306b643b 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 323 1.2E-125 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 S40542_RS20025 bd2e30b7cd5daaf46b35a1df09ba9cf3 500 PIRSF PIRSF001267 4 500 9.8E-166 T 11-11-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 S40542_RS20025 bd2e30b7cd5daaf46b35a1df09ba9cf3 500 SUPERFAMILY SSF53067 135 305 8.33E-41 T 11-11-2016 S40542_RS20025 bd2e30b7cd5daaf46b35a1df09ba9cf3 500 SUPERFAMILY SSF53067 11 130 7.3E-36 T 11-11-2016 S40542_RS20025 bd2e30b7cd5daaf46b35a1df09ba9cf3 500 Pfam PF02541 Ppx/GppA phosphatase family 24 304 3.6E-79 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 S40542_RS20025 bd2e30b7cd5daaf46b35a1df09ba9cf3 500 Gene3D G3DSA:3.30.420.40 9 130 4.9E-41 T 11-11-2016 S40542_RS20025 bd2e30b7cd5daaf46b35a1df09ba9cf3 500 Gene3D G3DSA:3.30.420.150 133 305 2.2E-44 T 11-11-2016 S40542_RS20025 bd2e30b7cd5daaf46b35a1df09ba9cf3 500 SUPERFAMILY SSF109604 310 498 1.73E-38 T 11-11-2016 S40542_RS08170 38ce8fd1478b362228e39213e9b8e77a 138 Pfam PF00293 NUDIX domain 6 120 6.2E-22 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS08170 38ce8fd1478b362228e39213e9b8e77a 138 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.3E-7 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 S40542_RS08170 38ce8fd1478b362228e39213e9b8e77a 138 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.3E-7 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 S40542_RS08170 38ce8fd1478b362228e39213e9b8e77a 138 Gene3D G3DSA:3.90.79.10 4 120 1.1E-38 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS08170 38ce8fd1478b362228e39213e9b8e77a 138 SUPERFAMILY SSF55811 4 124 1.35E-33 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS08170 38ce8fd1478b362228e39213e9b8e77a 138 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 Gene3D G3DSA:2.60.120.380 499 597 9.9E-4 T 11-11-2016 S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 436 446 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 Gene3D G3DSA:3.40.50.200 154 495 2.6E-86 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 PRINTS PR00723 Subtilisin serine protease family (S8) signature 253 266 1.7E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 PRINTS PR00723 Subtilisin serine protease family (S8) signature 188 207 1.7E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 PRINTS PR00723 Subtilisin serine protease family (S8) signature 435 451 1.7E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 SUPERFAMILY SSF52743 250 496 1.13E-75 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 SUPERFAMILY SSF52743 175 223 1.13E-75 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 525 589 1.7E-13 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 631 695 5.9E-14 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 Pfam PF00082 Subtilase family 188 486 2.4E-49 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS03820 2b2010bd3bbdfe6ed7cf6196cd320b81 710 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 257 267 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 Gene3D G3DSA:2.30.22.10 143 200 4.2E-27 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 Pfam PF01025 GrpE 36 199 3.0E-50 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 Gene3D G3DSA:3.90.20.20 42 142 5.8E-34 T 11-11-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 Hamap MF_01151 Protein GrpE [grpE]. 10 199 22.451 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 SUPERFAMILY SSF51064 144 199 3.27E-19 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 ProSitePatterns PS01071 grpE protein signature. 154 197 - T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 SUPERFAMILY SSF58014 46 143 3.01E-29 T 11-11-2016 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 PRINTS PR00773 GrpE protein signature 96 111 3.0E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 PRINTS PR00773 GrpE protein signature 68 84 3.0E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 PRINTS PR00773 GrpE protein signature 178 197 3.0E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 S40542_RS14715 6a06081a53f54da6f2a72a047d041156 202 PRINTS PR00773 GrpE protein signature 151 166 3.0E-27 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 Gene3D G3DSA:2.170.130.10 51 164 1.9E-35 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 SUPERFAMILY SSF56935 315 355 1.5E-94 T 11-11-2016 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 SUPERFAMILY SSF56935 740 935 1.5E-94 T 11-11-2016 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 SUPERFAMILY SSF56935 667 710 1.5E-94 T 11-11-2016 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 SUPERFAMILY SSF56935 38 221 1.5E-94 T 11-11-2016 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 SUPERFAMILY SSF56935 387 438 1.5E-94 T 11-11-2016 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 SUPERFAMILY SSF56935 476 630 1.5E-94 T 11-11-2016 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 162 2.9E-25 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 Pfam PF00593 TonB dependent receptor 599 934 9.3E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 Gene3D G3DSA:2.40.170.20 299 935 1.3E-74 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16070 5e9394c1a33e4e53f749a59e3cd858e2 935 Gene3D G3DSA:2.40.170.20 165 226 1.3E-74 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS02870 559a8caf6ea28ae78af1b1b04777e846 112 SUPERFAMILY SSF81343 4 111 1.74E-12 T 11-11-2016 S40542_RS02870 559a8caf6ea28ae78af1b1b04777e846 112 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 7 111 7.0E-19 T 11-11-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 S40542_RS02870 559a8caf6ea28ae78af1b1b04777e846 112 PIRSF PIRSF000169 1 112 6.4E-22 T 11-11-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 S40542_RS02870 559a8caf6ea28ae78af1b1b04777e846 112 Gene3D G3DSA:1.20.1300.10 4 111 1.1E-20 T 11-11-2016 S40542_RS19225 4ae1a7ac947e061a463d262a717456c0 459 SUPERFAMILY SSF56059 86 262 1.6E-30 T 11-11-2016 S40542_RS19225 4ae1a7ac947e061a463d262a717456c0 459 Pfam PF08443 RimK-like ATP-grasp domain 104 252 2.1E-11 T 11-11-2016 IPR013651 ATP-grasp fold, RimK-type S40542_RS19225 4ae1a7ac947e061a463d262a717456c0 459 SUPERFAMILY SSF47781 395 454 3.06E-5 T 11-11-2016 IPR010994 RuvA domain 2-like S40542_RS19225 4ae1a7ac947e061a463d262a717456c0 459 Gene3D G3DSA:3.30.1490.20 97 165 1.7E-4 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS19225 4ae1a7ac947e061a463d262a717456c0 459 Gene3D G3DSA:3.30.470.20 166 245 3.0E-11 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS07670 c0a54a724e88cc35a4253d7c3fcd08c2 242 Gene3D G3DSA:3.30.420.10 79 236 1.1E-46 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS07670 c0a54a724e88cc35a4253d7c3fcd08c2 242 SUPERFAMILY SSF53098 79 237 1.21E-41 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS07670 c0a54a724e88cc35a4253d7c3fcd08c2 242 Pfam PF13683 Integrase core domain 170 235 3.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 S40542_RS07670 c0a54a724e88cc35a4253d7c3fcd08c2 242 Pfam PF13276 HTH-like domain 16 70 1.7E-8 T 11-11-2016 IPR025948 HTH-like domain S40542_RS13080 c0a54a724e88cc35a4253d7c3fcd08c2 242 Gene3D G3DSA:3.30.420.10 79 236 1.1E-46 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS13080 c0a54a724e88cc35a4253d7c3fcd08c2 242 SUPERFAMILY SSF53098 79 237 1.21E-41 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS13080 c0a54a724e88cc35a4253d7c3fcd08c2 242 Pfam PF13683 Integrase core domain 170 235 3.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 S40542_RS13080 c0a54a724e88cc35a4253d7c3fcd08c2 242 Pfam PF13276 HTH-like domain 16 70 1.7E-8 T 11-11-2016 IPR025948 HTH-like domain S40542_RS04795 2f1c39929a31b082cdafc4c2ed7d0d4a 109 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 82 101 - T 11-11-2016 IPR001876 Zinc finger, RanBP2-type GO:0008270 S40542_RS04795 2f1c39929a31b082cdafc4c2ed7d0d4a 109 Pfam PF09413 Putative prokaryotic signal transducing protein 7 70 5.7E-8 T 11-11-2016 IPR018551 Domain of unknown function DUF2007 S40542_RS20165 c6051d9ff41dc0d0e708d45914d90758 292 SUPERFAMILY SSF51735 3 289 7.2E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20165 c6051d9ff41dc0d0e708d45914d90758 292 Gene3D G3DSA:3.40.50.720 1 239 1.9E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20165 c6051d9ff41dc0d0e708d45914d90758 292 Pfam PF04321 RmlD substrate binding domain 3 290 6.1E-62 T 11-11-2016 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 S40542_RS10335 414f5f3f9a265dabd48980467ef2b14a 124 SUPERFAMILY SSF161084 5 122 2.49E-25 T 11-11-2016 S40542_RS10335 414f5f3f9a265dabd48980467ef2b14a 124 Gene3D G3DSA:1.20.120.550 5 121 1.0E-18 T 11-11-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain S40542_RS10335 414f5f3f9a265dabd48980467ef2b14a 124 Pfam PF01124 MAPEG family 4 120 8.0E-23 T 11-11-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 SUPERFAMILY SSF53300 93 279 7.53E-19 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 SMART SM00327 89 261 6.4E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 Gene3D G3DSA:1.25.40.10 372 439 5.6E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 SMART SM00028 400 433 9.5E-7 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 Pfam PF13519 von Willebrand factor type A domain 93 199 3.7E-14 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 Pfam PF00515 Tetratricopeptide repeat 402 432 4.7E-8 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 SUPERFAMILY SSF48452 371 447 2.89E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 Gene3D G3DSA:1.10.1300.10 440 487 1.3E-4 T 11-11-2016 IPR002073 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain GO:0004114|GO:0007165 S40542_RS08795 28e69b5de1d471fd29181a6edb485ed8 624 Gene3D G3DSA:1.10.1300.10 134 162 1.3E-4 T 11-11-2016 IPR002073 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain GO:0004114|GO:0007165 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 187 639 6.2E-209 T 11-11-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 SUPERFAMILY SSF51230 105 196 1.57E-21 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Gene3D G3DSA:2.40.50.100 1 94 6.5E-22 T 11-11-2016 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 SUPERFAMILY SSF47005 326 371 3.79E-12 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 408 638 3.9E-81 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 SUPERFAMILY SSF51230 1 94 3.66E-23 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 SUPERFAMILY SSF52777 397 638 1.38E-82 T 11-11-2016 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Pfam PF02817 e3 binding domain 333 367 3.9E-13 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Gene3D G3DSA:4.10.320.10 325 372 1.8E-19 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Gene3D G3DSA:3.30.559.10 398 639 1.4E-85 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 232 261 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Gene3D G3DSA:2.40.50.100 107 181 1.1E-20 T 11-11-2016 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Gene3D G3DSA:2.40.50.100 211 285 2.0E-22 T 11-11-2016 S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 SUPERFAMILY SSF51230 209 300 1.96E-23 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Pfam PF00364 Biotin-requiring enzyme 4 73 2.6E-20 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Pfam PF00364 Biotin-requiring enzyme 210 280 4.4E-22 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS02425 bda5b73a4a2d7911343d88bf7a9929d9 639 Pfam PF00364 Biotin-requiring enzyme 106 176 2.1E-20 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 SMART SM00052 532 776 1.1E-106 T 11-11-2016 IPR001633 EAL domain S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 Gene3D G3DSA:3.20.20.450 536 784 8.8E-90 T 11-11-2016 IPR001633 EAL domain S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 Gene3D G3DSA:3.30.70.270 361 530 1.6E-53 T 11-11-2016 S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 Gene3D G3DSA:3.30.450.40 4 170 6.5E-33 T 11-11-2016 IPR029016 GAF domain-like S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 SMART SM00065 204 356 0.0013 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 SMART SM00065 29 176 6.8E-19 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 SMART SM00267 348 522 3.3E-56 T 11-11-2016 IPR000160 GGDEF domain S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 SUPERFAMILY SSF141868 537 783 2.22E-81 T 11-11-2016 IPR001633 EAL domain S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 521 9.0E-41 T 11-11-2016 IPR000160 GGDEF domain S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 SUPERFAMILY SSF55781 3 166 4.14E-32 T 11-11-2016 IPR029016 GAF domain-like S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 Pfam PF00563 EAL domain 538 771 2.5E-70 T 11-11-2016 IPR001633 EAL domain S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 SUPERFAMILY SSF55781 190 359 5.23E-18 T 11-11-2016 IPR029016 GAF domain-like S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 SUPERFAMILY SSF55073 364 524 6.36E-46 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 517 5.7E-45 T 11-11-2016 IPR000160 GGDEF domain S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 Gene3D G3DSA:3.30.450.40 181 359 5.1E-16 T 11-11-2016 IPR029016 GAF domain-like S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 Pfam PF13185 GAF domain 29 163 8.5E-15 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS17285 a32fe26e1f817b8ef81e0e369ce88850 789 Pfam PF13185 GAF domain 203 347 3.5E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 PIRSF PIRSF000423 1 438 4.0E-193 T 11-11-2016 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 Gene3D G3DSA:3.40.630.30 291 434 5.0E-36 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 Pfam PF00696 Amino acid kinase family 23 264 3.7E-27 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 Pfam PF00583 Acetyltransferase (GNAT) family 337 409 1.2E-6 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 SUPERFAMILY SSF55729 293 415 1.72E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 Gene3D G3DSA:3.40.1160.10 21 286 3.6E-63 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 SUPERFAMILY SSF53633 3 289 1.68E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 6 437 9.5E-185 T 11-11-2016 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 S40542_RS02840 58a2b77cb741d71909845a5d377c5e1f 448 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 438 211.154 T 11-11-2016 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 Gene3D G3DSA:2.10.10.20 533 581 8.5E-10 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 Gene3D G3DSA:3.40.50.200 114 336 1.8E-64 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 Gene3D G3DSA:3.40.50.200 448 525 1.8E-64 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 Pfam PF00082 Subtilase family 128 515 8.4E-35 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 SUPERFAMILY SSF52743 115 527 5.01E-66 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 PRINTS PR00723 Subtilisin serine protease family (S8) signature 164 177 4.8E-12 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 PRINTS PR00723 Subtilisin serine protease family (S8) signature 464 480 4.8E-12 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 PRINTS PR00723 Subtilisin serine protease family (S8) signature 127 146 4.8E-12 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 132 143 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 Pfam PF02839 Carbohydrate binding domain 538 575 8.1E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS15255 4f4b3c71a090ae1334f6fa8d81b55775 623 SUPERFAMILY SSF51055 528 581 3.4E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 Gene3D G3DSA:2.140.10.10 553 682 1.7E-5 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 Gene3D G3DSA:2.140.10.10 491 515 1.7E-5 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 106 1.6E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 Gene3D G3DSA:2.120.10.30 198 433 2.5E-15 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 SUPERFAMILY SSF50978 512 672 3.48E-8 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 SUPERFAMILY SSF50978 337 435 3.48E-8 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 SMART SM00862 30 106 3.8E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 SUPERFAMILY SSF82171 177 478 3.34E-15 T 11-11-2016 S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 Gene3D G3DSA:1.10.10.10 10 106 3.9E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20685 b281e2cece1234a8a7f5ec96dcc9d758 726 SUPERFAMILY SSF46894 13 106 3.97E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS04580 8651319516625da156efb18e425edfe6 319 SUPERFAMILY SSF52440 3 123 5.47E-43 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS04580 8651319516625da156efb18e425edfe6 319 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 8.0E-44 T 11-11-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 S40542_RS04580 8651319516625da156efb18e425edfe6 319 SUPERFAMILY SSF56059 124 313 7.32E-60 T 11-11-2016 S40542_RS04580 8651319516625da156efb18e425edfe6 319 Gene3D G3DSA:3.30.1490.20 138 192 2.1E-30 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS04580 8651319516625da156efb18e425edfe6 319 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.6E-77 T 11-11-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 S40542_RS04580 8651319516625da156efb18e425edfe6 319 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 165.641 T 11-11-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 S40542_RS04580 8651319516625da156efb18e425edfe6 319 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 313 1.2E-136 T 11-11-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 S40542_RS04580 8651319516625da156efb18e425edfe6 319 Gene3D G3DSA:3.30.470.20 193 300 2.9E-49 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS04580 8651319516625da156efb18e425edfe6 319 Gene3D G3DSA:3.40.50.20 3 130 1.1E-51 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 Pfam PF00072 Response regulator receiver domain 9 111 2.0E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 297 3.3E-43 T 11-11-2016 IPR000160 GGDEF domain S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 Gene3D G3DSA:3.30.70.270 141 306 4.1E-48 T 11-11-2016 S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 SMART SM00448 7 121 5.2E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 SUPERFAMILY SSF55073 144 305 6.43E-43 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 SMART SM00267 128 305 3.5E-48 T 11-11-2016 IPR000160 GGDEF domain S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 SUPERFAMILY SSF52172 6 165 8.97E-19 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 Gene3D G3DSA:3.40.50.2300 7 135 3.6E-17 T 11-11-2016 S40542_RS09960 b17692a3a1a17446b976b6ec0cc0fff6 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 298 3.6E-44 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00795 a71893635cc7ef7ec2aac6560ea67a9f 355 Gene3D G3DSA:3.20.20.210 2 354 7.6E-161 T 11-11-2016 S40542_RS00795 a71893635cc7ef7ec2aac6560ea67a9f 355 SUPERFAMILY SSF51726 2 353 1.92E-125 T 11-11-2016 S40542_RS00795 a71893635cc7ef7ec2aac6560ea67a9f 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 5.6E-139 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00795 a71893635cc7ef7ec2aac6560ea67a9f 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.708 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00795 a71893635cc7ef7ec2aac6560ea67a9f 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00795 a71893635cc7ef7ec2aac6560ea67a9f 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00795 a71893635cc7ef7ec2aac6560ea67a9f 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.4E-144 T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS13655 a6f2283c1def934c16c0efdf400eb3ea 135 Gene3D G3DSA:3.10.400.10 5 134 1.6E-43 T 11-11-2016 S40542_RS13655 a6f2283c1def934c16c0efdf400eb3ea 135 PIRSF PIRSF021320 1 135 1.4E-32 T 11-11-2016 IPR009326 Protein of unknown function DUF984 S40542_RS13655 a6f2283c1def934c16c0efdf400eb3ea 135 Pfam PF04266 ASCH domain 24 133 2.2E-20 T 11-11-2016 IPR007374 ASCH domain S40542_RS13655 a6f2283c1def934c16c0efdf400eb3ea 135 SMART SM01022 16 133 4.1E-31 T 11-11-2016 IPR007374 ASCH domain S40542_RS13655 a6f2283c1def934c16c0efdf400eb3ea 135 SUPERFAMILY SSF88697 5 133 9.94E-36 T 11-11-2016 IPR015947 PUA-like domain S40542_RS06650 73f041002dec3f9cf633128d702fcbbc 450 Pfam PF02163 Peptidase family M50 11 438 2.4E-80 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 S40542_RS06650 73f041002dec3f9cf633128d702fcbbc 450 SUPERFAMILY SSF50156 228 311 2.23E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS06650 73f041002dec3f9cf633128d702fcbbc 450 SMART SM00228 107 186 0.074 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS06650 73f041002dec3f9cf633128d702fcbbc 450 SMART SM00228 210 279 0.0037 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS06650 73f041002dec3f9cf633128d702fcbbc 450 Gene3D G3DSA:2.30.42.10 228 295 7.6E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS06650 73f041002dec3f9cf633128d702fcbbc 450 SUPERFAMILY SSF50156 91 184 2.37E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS06650 73f041002dec3f9cf633128d702fcbbc 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 450 9.4E-124 T 11-11-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 S40542_RS06650 73f041002dec3f9cf633128d702fcbbc 450 Gene3D G3DSA:2.30.42.10 95 186 6.2E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS17700 66cfc54fe5990477a70a36d6dfc30329 194 SUPERFAMILY SSF53178 5 193 1.44E-68 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 S40542_RS17700 66cfc54fe5990477a70a36d6dfc30329 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 34.644 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 S40542_RS17700 66cfc54fe5990477a70a36d6dfc30329 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 S40542_RS17700 66cfc54fe5990477a70a36d6dfc30329 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 4.1E-54 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 S40542_RS17700 66cfc54fe5990477a70a36d6dfc30329 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 2.2E-66 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 S40542_RS17700 66cfc54fe5990477a70a36d6dfc30329 194 Gene3D G3DSA:3.40.50.1470 4 192 7.0E-71 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 S40542_RS17700 66cfc54fe5990477a70a36d6dfc30329 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 S40542_RS16590 0ab1bf144adbd13053d9332ac126ed24 280 Pfam PF04865 Baseplate J-like protein 95 238 4.5E-17 T 11-11-2016 IPR006949 Baseplate protein J-like S40542_RS16590 0ab1bf144adbd13053d9332ac126ed24 280 PIRSF PIRSF020481 2 273 2.6E-68 T 11-11-2016 IPR014507 Baseplate assembly protein J, predicted S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 739 2.8E-130 T 11-11-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 SUPERFAMILY SSF51621 427 722 2.88E-90 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 Pfam PF05524 PEP-utilising enzyme, N-terminal 176 298 8.8E-21 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 Gene3D G3DSA:3.30.450.40 2 165 1.2E-43 T 11-11-2016 IPR029016 GAF domain-like S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 SUPERFAMILY SSF47831 205 313 6.15E-24 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 Gene3D G3DSA:3.20.20.60 428 742 2.0E-93 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 483 2.7E-20 T 11-11-2016 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 674 686 2.7E-20 T 11-11-2016 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 621 636 2.7E-20 T 11-11-2016 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 638 653 2.7E-20 T 11-11-2016 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 Gene3D G3DSA:1.10.274.10 203 303 5.3E-27 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 SUPERFAMILY SSF55781 2 159 6.98E-30 T 11-11-2016 IPR029016 GAF domain-like S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 Pfam PF01590 GAF domain 18 153 3.0E-15 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 SUPERFAMILY SSF52009 297 416 1.44E-28 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 Pfam PF00391 PEP-utilising enzyme, mobile domain 325 396 7.3E-17 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 SMART SM00065 17 164 1.7E-20 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 Gene3D G3DSA:3.50.30.10 304 424 5.3E-30 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 S40542_RS16750 5e443cf3b2e4f26ef6a43dc030d65495 761 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 427 715 1.5E-89 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 S40542_RS00105 b77e4912357ccafd9d23222210afb522 359 Pfam PF02481 DNA recombination-mediator protein A 71 276 4.4E-76 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 S40542_RS00105 b77e4912357ccafd9d23222210afb522 359 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 285 6.1E-75 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 S40542_RS00105 b77e4912357ccafd9d23222210afb522 359 Gene3D G3DSA:3.40.50.450 111 256 6.3E-12 T 11-11-2016 S40542_RS00105 b77e4912357ccafd9d23222210afb522 359 SUPERFAMILY SSF102405 80 285 1.08E-41 T 11-11-2016 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Pfam PF01627 Hpt domain 808 866 1.4E-8 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Pfam PF07695 7TM diverse intracellular signalling 176 375 1.7E-25 T 11-11-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 SUPERFAMILY SSF47226 766 884 3.27E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 SUPERFAMILY SSF52172 674 788 9.53E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 SMART SM00073 794 894 1.4E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Gene3D G3DSA:3.30.565.10 467 638 4.6E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 SMART SM00387 527 638 1.3E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 414 479 6.6E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 SUPERFAMILY SSF47384 399 481 9.42E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Pfam PF00072 Response regulator receiver domain 674 783 4.4E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 SMART SM00388 414 480 1.7E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 3.6E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 591 3.6E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 577 3.6E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 616 3.6E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Gene3D G3DSA:1.10.287.130 406 466 9.9E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 SMART SM00448 672 783 2.2E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Gene3D G3DSA:3.40.50.2300 673 776 1.4E-33 T 11-11-2016 S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 SUPERFAMILY SSF55874 469 640 1.44E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 528 636 1.4E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11700 cf577d696835d420ee0553be1d354f93 894 Gene3D G3DSA:1.20.120.160 777 887 2.6E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 4.4E-25 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 4.4E-25 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 4.4E-25 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 4.4E-25 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 4.4E-25 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 Pfam PF01131 DNA topoisomerase 158 593 1.1E-115 T 11-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 Pfam PF01751 Toprim domain 3 135 3.4E-14 T 11-11-2016 IPR006171 Toprim domain S40542_RS06055 5b123085dc12711980e48f50e332e259 645 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 642 55.659 T 11-11-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 SMART SM00437 280 559 9.2E-91 T 11-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 SMART SM00436 128 223 3.1E-31 T 11-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 SMART SM00493 1 124 1.1E-24 T 11-11-2016 IPR006171 Toprim domain S40542_RS06055 5b123085dc12711980e48f50e332e259 645 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 11-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 639 1.3E-234 T 11-11-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 SUPERFAMILY SSF56712 1 604 6.02E-183 T 11-11-2016 IPR023405 DNA topoisomerase, type IA, core domain S40542_RS06055 5b123085dc12711980e48f50e332e259 645 Gene3D G3DSA:1.10.460.10 161 217 5.9E-52 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 Gene3D G3DSA:1.10.460.10 491 604 5.9E-52 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 Gene3D G3DSA:2.70.20.10 219 252 3.6E-43 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 Gene3D G3DSA:2.70.20.10 370 489 3.6E-43 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 S40542_RS06055 5b123085dc12711980e48f50e332e259 645 Gene3D G3DSA:3.40.50.140 1 153 4.4E-44 T 11-11-2016 IPR006171 Toprim domain S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 Pfam PF03466 LysR substrate binding domain 109 310 2.3E-20 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 2.5E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 2.5E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 2.5E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 79 1.4E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 Gene3D G3DSA:3.40.190.10 103 188 2.6E-17 T 11-11-2016 S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 Gene3D G3DSA:3.40.190.10 287 313 2.6E-17 T 11-11-2016 S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 Gene3D G3DSA:3.40.190.10 189 283 3.0E-23 T 11-11-2016 S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 Gene3D G3DSA:1.10.10.10 13 99 2.5E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 SUPERFAMILY SSF53850 106 311 1.39E-34 T 11-11-2016 S40542_RS09090 a711a423954a549cd44f072c9cd60b80 319 SUPERFAMILY SSF46785 15 100 2.87E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 Gene3D G3DSA:3.40.1190.10 100 301 2.2E-53 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 SUPERFAMILY SSF51984 7 100 3.49E-16 T 11-11-2016 S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 SUPERFAMILY SSF53244 301 439 5.04E-39 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 437 5.0E-115 T 11-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 Pfam PF08245 Mur ligase middle domain 116 281 4.1E-25 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 Gene3D G3DSA:3.90.190.20 303 436 2.7E-42 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 439 31.559 T 11-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 303 366 1.4E-6 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 Gene3D G3DSA:3.40.50.720 7 99 1.7E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18750 7c8ecf969fcd26a92c149c7b5d3fba97 439 SUPERFAMILY SSF53623 102 299 3.66E-46 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS17005 2d78e8d7b00be21d0dea4d259990bb14 335 Pfam PF00535 Glycosyl transferase family 2 10 126 2.8E-32 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 S40542_RS17005 2d78e8d7b00be21d0dea4d259990bb14 335 SUPERFAMILY SSF53448 7 234 4.5E-60 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS17005 2d78e8d7b00be21d0dea4d259990bb14 335 Gene3D G3DSA:3.90.550.10 7 236 5.0E-60 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS03185 7cd57cf441f16b95323266530561e6b9 156 SUPERFAMILY SSF54523 9 112 3.87E-20 T 11-11-2016 S40542_RS03185 7cd57cf441f16b95323266530561e6b9 156 Pfam PF13633 Prokaryotic N-terminal methylation site 6 32 8.2E-12 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS03185 7cd57cf441f16b95323266530561e6b9 156 Gene3D G3DSA:3.30.700.10 9 150 4.1E-29 T 11-11-2016 S40542_RS03185 7cd57cf441f16b95323266530561e6b9 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS03185 7cd57cf441f16b95323266530561e6b9 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 2.3E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS03185 7cd57cf441f16b95323266530561e6b9 156 Pfam PF00114 Pilin (bacterial filament) 38 150 1.4E-5 T 11-11-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 S40542_RS04730 02952d11b142cc451d31ed4ad99f62c6 241 Gene3D G3DSA:1.10.510.10 151 218 2.5E-11 T 11-11-2016 S40542_RS04730 02952d11b142cc451d31ed4ad99f62c6 241 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 235 1.2E-52 T 11-11-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 S40542_RS04730 02952d11b142cc451d31ed4ad99f62c6 241 SUPERFAMILY SSF56112 51 189 1.62E-14 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS04730 02952d11b142cc451d31ed4ad99f62c6 241 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 237 29.498 T 11-11-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 S40542_RS14350 b046a6eec0331407ca1501b0b4c973e3 350 Gene3D G3DSA:3.30.1330.10 23 171 8.6E-63 T 11-11-2016 IPR016188 PurM-like, N-terminal domain S40542_RS14350 b046a6eec0331407ca1501b0b4c973e3 350 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.59 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS14350 b046a6eec0331407ca1501b0b4c973e3 350 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.3E-150 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS14350 b046a6eec0331407ca1501b0b4c973e3 350 SUPERFAMILY SSF56042 172 340 2.54E-62 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS14350 b046a6eec0331407ca1501b0b4c973e3 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 165 2.8E-14 T 11-11-2016 IPR016188 PurM-like, N-terminal domain S40542_RS14350 b046a6eec0331407ca1501b0b4c973e3 350 Gene3D G3DSA:3.90.650.10 173 344 2.1E-69 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS14350 b046a6eec0331407ca1501b0b4c973e3 350 SUPERFAMILY SSF55326 8 171 5.98E-53 T 11-11-2016 S40542_RS14350 b046a6eec0331407ca1501b0b4c973e3 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 2.1E-38 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS11725 52d62be1ee9b7fb9c00cb5e957b6ce95 278 SUPERFAMILY SSF53850 11 263 9.88E-18 T 11-11-2016 S40542_RS11725 52d62be1ee9b7fb9c00cb5e957b6ce95 278 TIGRFAM TIGR02285 TIGR02285: conserved hypothetical protein 5 261 9.3E-43 T 11-11-2016 IPR011972 Conserved hypothetical protein CHP02285 S40542_RS11725 52d62be1ee9b7fb9c00cb5e957b6ce95 278 Gene3D G3DSA:3.40.190.10 24 102 2.7E-8 T 11-11-2016 S40542_RS11725 52d62be1ee9b7fb9c00cb5e957b6ce95 278 Gene3D G3DSA:3.40.190.10 246 262 2.7E-8 T 11-11-2016 S40542_RS11725 52d62be1ee9b7fb9c00cb5e957b6ce95 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 260 8.2E-12 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS18755 26afdb67cd606fdf93ec7c0f08bc1679 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS18755 26afdb67cd606fdf93ec7c0f08bc1679 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 5.3E-6 T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS18755 26afdb67cd606fdf93ec7c0f08bc1679 360 Pfam PF00953 Glycosyl transferase family 4 99 284 3.8E-36 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 S40542_RS18755 26afdb67cd606fdf93ec7c0f08bc1679 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.266 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS18755 26afdb67cd606fdf93ec7c0f08bc1679 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS18755 26afdb67cd606fdf93ec7c0f08bc1679 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 6.0E-147 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 SMART SM00448 22 144 0.004 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 SMART SM00471 334 471 7.2E-9 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 Gene3D G3DSA:1.10.3210.10 318 500 3.0E-22 T 11-11-2016 IPR006674 HD domain S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 Gene3D G3DSA:3.40.50.2300 21 152 1.6E-13 T 11-11-2016 S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 Pfam PF00072 Response regulator receiver domain 24 134 5.9E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 Pfam PF01966 HD domain 340 461 6.8E-20 T 11-11-2016 IPR006674 HD domain S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 SUPERFAMILY SSF52172 18 151 4.84E-13 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 SUPERFAMILY SSF109604 315 502 6.28E-39 T 11-11-2016 S40542_RS17660 9d068672a3aa4cffbd1d8ae47ab74693 515 Pfam PF11849 Domain of unknown function (DUF3369) 144 316 6.9E-46 T 11-11-2016 IPR021800 Domain of unknown function DUF3369 S40542_RS12880 583bb21b520f4131cbf0be7696a5a404 298 Gene3D G3DSA:3.30.70.1290 107 161 3.8E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS12880 583bb21b520f4131cbf0be7696a5a404 298 Gene3D G3DSA:3.30.70.1290 19 54 3.8E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS12880 583bb21b520f4131cbf0be7696a5a404 298 SUPERFAMILY SSF143422 13 53 3.92E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS12880 583bb21b520f4131cbf0be7696a5a404 298 SUPERFAMILY SSF143422 106 165 3.92E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS01435 60d485d02800c9bc47e65f92726e9713 246 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 102 130 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 S40542_RS01435 60d485d02800c9bc47e65f92726e9713 246 Gene3D G3DSA:2.160.10.10 65 229 6.5E-45 T 11-11-2016 S40542_RS01435 60d485d02800c9bc47e65f92726e9713 246 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 6 41 2.8E-6 T 11-11-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 S40542_RS01435 60d485d02800c9bc47e65f92726e9713 246 SUPERFAMILY SSF51161 14 186 6.7E-42 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS01435 60d485d02800c9bc47e65f92726e9713 246 Gene3D G3DSA:1.10.166.10 6 41 2.2E-6 T 11-11-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 S40542_RS01435 60d485d02800c9bc47e65f92726e9713 246 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 143 176 7.8E-7 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 657 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 643 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 701 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 682 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SUPERFAMILY SSF48452 67 180 6.25E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SUPERFAMILY SSF47384 465 547 9.81E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Gene3D G3DSA:1.10.287.130 471 542 2.2E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 594 701 4.7E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Gene3D G3DSA:3.30.565.10 547 705 4.3E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SUPERFAMILY SSF55874 535 704 5.89E-47 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Pfam PF00512 His Kinase A (phospho-acceptor) domain 481 545 1.1E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Gene3D G3DSA:1.25.40.10 244 345 5.9E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Pfam PF01627 Hpt domain 862 923 1.4E-8 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Gene3D G3DSA:3.40.50.2300 728 833 8.0E-34 T 11-11-2016 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Pfam PF13424 Tetratricopeptide repeat 187 258 2.9E-13 T 11-11-2016 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SUPERFAMILY SSF47226 821 938 2.75E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Gene3D G3DSA:1.25.40.10 117 243 1.5E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Pfam PF00072 Response regulator receiver domain 729 838 2.0E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SMART SM00387 593 704 3.7E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 Gene3D G3DSA:1.20.120.160 834 937 2.7E-11 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SUPERFAMILY SSF52172 729 852 1.29E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SUPERFAMILY SSF48452 149 354 2.85E-23 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SMART SM00028 147 180 13.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SMART SM00028 187 220 51.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SMART SM00028 107 140 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SMART SM00028 307 340 91.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SMART SM00028 227 260 0.078 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SMART SM00388 480 546 2.0E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20050 657adfe35eca10741efc3595672b1eff 951 SMART SM00448 727 838 5.6E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS14825 b30a2b1939f4a1406cef80b7dcaf6a7a 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 99.268 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 S40542_RS14825 b30a2b1939f4a1406cef80b7dcaf6a7a 199 Pfam PF02132 RecR protein 41 77 1.6E-11 T 11-11-2016 IPR023628 Recombination protein RecR, C4-type zinc finger S40542_RS14825 b30a2b1939f4a1406cef80b7dcaf6a7a 199 SUPERFAMILY SSF111304 2 198 1.57E-71 T 11-11-2016 IPR023627 Recombination protein RecR S40542_RS14825 b30a2b1939f4a1406cef80b7dcaf6a7a 199 Gene3D G3DSA:3.40.50.140 83 171 1.5E-5 T 11-11-2016 IPR006171 Toprim domain S40542_RS14825 b30a2b1939f4a1406cef80b7dcaf6a7a 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 11-11-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 S40542_RS14825 b30a2b1939f4a1406cef80b7dcaf6a7a 199 Pfam PF13662 Toprim domain 83 172 3.0E-26 T 11-11-2016 IPR006171 Toprim domain S40542_RS14825 b30a2b1939f4a1406cef80b7dcaf6a7a 199 SMART SM00493 81 166 7.6E-18 T 11-11-2016 IPR006171 Toprim domain S40542_RS14825 b30a2b1939f4a1406cef80b7dcaf6a7a 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 2.5E-75 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 SUPERFAMILY SSF53187 104 428 1.44E-91 T 11-11-2016 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 Gene3D G3DSA:3.40.630.10 94 428 1.1E-102 T 11-11-2016 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 423 2.7E-91 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 2.9E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 2.9E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 2.9E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 2.9E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 2.9E-44 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 PIRSF PIRSF036388 1 431 2.9E-189 T 11-11-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 S40542_RS03650 6b579a4a67d30786f0c4e8fb44267e88 431 Pfam PF12404 Peptidase 7 81 3.3E-29 T 11-11-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 Pfam PF08453 Peptidase family M9 N-terminal 86 265 3.8E-51 T 11-11-2016 IPR013661 Peptidase M9, collagenase, N-terminal domain S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 SUPERFAMILY SSF49299 619 703 1.31E-17 T 11-11-2016 IPR000601 PKD domain S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 Gene3D G3DSA:2.60.40.670 620 705 2.2E-18 T 11-11-2016 IPR000601 PKD domain S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 729 795 2.3E-10 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 Pfam PF01752 Collagenase 326 609 6.5E-101 T 11-11-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 Pfam PF00801 PKD domain 635 691 1.5E-10 T 11-11-2016 IPR000601 PKD domain S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 SMART SM00089 623 705 1.9E-13 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 152 170 2.6E-34 T 11-11-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 442 458 2.6E-34 T 11-11-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 507 522 2.6E-34 T 11-11-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 424 438 2.6E-34 T 11-11-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 S40542_RS06990 3a83a0e66dc16a2ed9aabcf9ae718e22 930 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 485 503 2.6E-34 T 11-11-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 S40542_RS10465 14b3bf57e6d9afc07e928f1114b28c21 895 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 788 872 2.1E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10465 14b3bf57e6d9afc07e928f1114b28c21 895 SMART SM00387 786 878 0.0073 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10465 14b3bf57e6d9afc07e928f1114b28c21 895 Gene3D G3DSA:3.30.565.10 784 878 3.5E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10465 14b3bf57e6d9afc07e928f1114b28c21 895 SUPERFAMILY SSF63825 21 142 6.54E-5 T 11-11-2016 S40542_RS10465 14b3bf57e6d9afc07e928f1114b28c21 895 SUPERFAMILY SSF63825 183 214 6.54E-5 T 11-11-2016 S40542_RS10465 14b3bf57e6d9afc07e928f1114b28c21 895 SUPERFAMILY SSF55874 765 876 3.27E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS18480 22f41b2ebec3dccc83d7296433f8387f 284 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 280 2.0E-93 T 11-11-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 S40542_RS18480 22f41b2ebec3dccc83d7296433f8387f 284 Gene3D G3DSA:3.40.50.720 1 226 5.1E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18480 22f41b2ebec3dccc83d7296433f8387f 284 Pfam PF04321 RmlD substrate binding domain 1 280 1.4E-89 T 11-11-2016 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 S40542_RS18480 22f41b2ebec3dccc83d7296433f8387f 284 SUPERFAMILY SSF51735 1 280 1.46E-85 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PIRSF PIRSF004557 7 440 1.1E-125 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 SUPERFAMILY SSF103491 14 423 6.8E-132 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 Pfam PF00344 SecY translocase 75 416 5.2E-115 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 432 28.919 T 11-11-2016 IPR026593 Protein translocase subunit SecY S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 Gene3D G3DSA:1.10.3370.10 14 436 1.2E-164 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 401 419 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 369 387 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 314 336 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 2.4E-94 T 11-11-2016 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS00970 2308cadf705c1e133f93044b052dd196 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 19 428 8.7E-133 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS12320 673ec16d387df55d04d59511aec6f283 664 Gene3D G3DSA:3.30.70.1230 403 586 1.1E-42 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 S40542_RS12320 673ec16d387df55d04d59511aec6f283 664 SMART SM01080 1 307 1.6E-32 T 11-11-2016 IPR007890 CHASE2 S40542_RS12320 673ec16d387df55d04d59511aec6f283 664 Pfam PF05226 CHASE2 domain 5 305 1.2E-41 T 11-11-2016 IPR007890 CHASE2 S40542_RS12320 673ec16d387df55d04d59511aec6f283 664 SMART SM00044 371 568 1.9E-6 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 S40542_RS12320 673ec16d387df55d04d59511aec6f283 664 SUPERFAMILY SSF55073 401 586 1.48E-56 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS12320 673ec16d387df55d04d59511aec6f283 664 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 405 584 2.4E-28 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 S40542_RS06090 5177e3a13ae9d7eb4f1197ab6b05f5f4 225 Pfam PF13861 FlgD Tudor-like domain 89 221 3.8E-9 T 11-11-2016 IPR025963 FlgD Tudor-like domain S40542_RS06090 5177e3a13ae9d7eb4f1197ab6b05f5f4 225 Pfam PF03963 Flagellar hook capping protein - N-terminal region 20 80 4.3E-19 T 11-11-2016 IPR005648 Flagellar hook capping protein S40542_RS06090 5177e3a13ae9d7eb4f1197ab6b05f5f4 225 Pfam PF13860 FlgD Ig-like domain 115 180 3.5E-18 T 11-11-2016 IPR025965 FlgD Ig-like domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 Pfam PF01476 LysM domain 313 354 4.6E-10 T 11-11-2016 IPR018392 LysM domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 Pfam PF01476 LysM domain 388 430 1.0E-9 T 11-11-2016 IPR018392 LysM domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 SUPERFAMILY SSF54106 312 354 7.98E-10 T 11-11-2016 IPR018392 LysM domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 Pfam PF01464 Transglycosylase SLT domain 104 201 4.8E-25 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 Gene3D G3DSA:3.10.350.10 311 354 5.1E-14 T 11-11-2016 IPR018392 LysM domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 Gene3D G3DSA:3.10.350.10 388 430 6.0E-11 T 11-11-2016 IPR018392 LysM domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 107 135 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 SUPERFAMILY SSF53955 86 230 1.06E-37 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 SUPERFAMILY SSF54106 387 431 3.27E-8 T 11-11-2016 IPR018392 LysM domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 SMART SM00257 312 355 3.8E-12 T 11-11-2016 IPR018392 LysM domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 SMART SM00257 387 431 9.7E-9 T 11-11-2016 IPR018392 LysM domain S40542_RS18245 da2407a338a632a49fdf98448629d7ba 473 Gene3D G3DSA:1.10.530.10 82 232 2.4E-43 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5037 5132 1.83E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3760 3860 1.7E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 4678 4784 2.48E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 6906 7000 1.83E-15 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 6419 6519 1.44E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 2487 2584 4.58E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5387 5452 1.06E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 4110 4208 1.27E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3992 4093 7.19E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 2253 2350 9.81E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 4454 4557 1.7E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 1443 1513 3.79E-9 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 6678 6764 1.96E-16 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 4225 4324 7.32E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5265 5335 1.7E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5502 5569 1.83E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5739 5803 2.75E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 1550 1654 1.57E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 4572 4687 1.7E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3880 3974 2.88E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 1789 1884 1.29E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 1673 1773 6.54E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 6793 6859 5.1E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3298 3393 4.45E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 6090 6154 1.83E-5 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 2129 2234 7.19E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 4808 4900 2.48E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5973 6037 3.4E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 6323 6401 8.89E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 2601 2688 1.26E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3412 3512 1.07E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5153 5252 3.4E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 2836 2928 2.35E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 42 82 1.1E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 7206 7255 3.4E-6 T 11-11-2016 IPR001434 Domain of unknown function DUF11 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 434 477 1.0E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 169 209 2.6E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 6206 6271 4.84E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 4926 5020 9.02E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 2021 2136 1.14E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 6553 6649 1.1E-5 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3065 3163 7.32E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3181 3280 8.24E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3532 3628 3.27E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5855 5920 4.84E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 3543 3610 7.4E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5985 6038 2.1E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2267 2334 8.5E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 3891 3958 2.2E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2383 2450 1.0E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5167 5231 1.2E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5634 5702 9.3E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 6335 6398 1.6E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4935 5002 4.6E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 6694 6757 1.2E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4703 4772 4.1E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2499 2566 3.6E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2963 3033 2.5E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5517 5570 1.9E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5400 5453 7.8E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 3079 3146 2.8E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 3659 3729 1.5E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4587 4654 4.9E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 6451 6504 7.2E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 1803 1870 5.8E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 3775 3842 2.8E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4355 4424 4.4E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2615 2685 1.5E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 1919 1986 2.8E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 6807 6859 2.4E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4471 4537 6.7E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 1571 1638 1.9E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5751 5805 2.8E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 1448 1510 4.3E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5283 5336 2.1E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5868 5922 3.4E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 3311 3378 1.3E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4239 4306 4.9E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 5051 5120 3.9E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2035 2104 5.2E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 6219 6273 3.4E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2847 2914 5.1E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 1687 1751 8.5E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 6102 6163 3.3E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2731 2798 2.8E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4819 4888 8.7E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4123 4190 2.7E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 2151 2218 8.5E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 4007 4071 1.2E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 3427 3494 1.7E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 3195 3262 2.8E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 Gene3D G3DSA:2.60.40.10 6926 6996 5.6E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 2948 3035 6.28E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 5622 5687 1.83E-6 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 3646 3732 1.83E-8 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 4344 4436 9.94E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 1904 2004 1.02E-7 T 11-11-2016 S40542_RS19385 a67d4b76235283ff128fd89787a038bf 7538 SUPERFAMILY SSF117074 2716 2816 1.57E-7 T 11-11-2016 S40542_RS04095 9768f9d7eed81a16c477cdc76f232f58 87 SUPERFAMILY SSF50182 7 69 2.45E-24 T 11-11-2016 IPR010920 LSM domain S40542_RS04095 9768f9d7eed81a16c477cdc76f232f58 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.587 T 11-11-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 S40542_RS04095 9768f9d7eed81a16c477cdc76f232f58 87 Gene3D G3DSA:2.30.30.100 1 74 1.1E-36 T 11-11-2016 S40542_RS04095 9768f9d7eed81a16c477cdc76f232f58 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.6E-30 T 11-11-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 S40542_RS05385 b89cfd97687211a07efe862efb551c9c 613 SUPERFAMILY SSF58104 304 613 9.55E-67 T 11-11-2016 S40542_RS05385 b89cfd97687211a07efe862efb551c9c 613 SMART SM01358 26 260 4.0E-11 T 11-11-2016 IPR032255 Helical bimodular sensor domain S40542_RS05385 b89cfd97687211a07efe862efb551c9c 613 SMART SM00283 351 612 2.8E-51 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS05385 b89cfd97687211a07efe862efb551c9c 613 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 412 611 3.3E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS05385 b89cfd97687211a07efe862efb551c9c 613 Pfam PF00672 HAMP domain 264 330 3.3E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS05385 b89cfd97687211a07efe862efb551c9c 613 Gene3D G3DSA:1.10.287.950 365 582 6.2E-51 T 11-11-2016 S40542_RS05385 b89cfd97687211a07efe862efb551c9c 613 SMART SM00304 282 336 2.1E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS14200 38f85fcf5cbd1bfb9d367a38be7345ca 334 Pfam PF00591 Glycosyl transferase family, a/b domain 74 321 9.2E-102 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 S40542_RS14200 38f85fcf5cbd1bfb9d367a38be7345ca 334 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 6.6E-15 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 S40542_RS14200 38f85fcf5cbd1bfb9d367a38be7345ca 334 SUPERFAMILY SSF47648 3 67 3.79E-17 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 S40542_RS14200 38f85fcf5cbd1bfb9d367a38be7345ca 334 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 4 330 5.3E-130 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 S40542_RS14200 38f85fcf5cbd1bfb9d367a38be7345ca 334 Gene3D G3DSA:1.20.970.10 2 66 4.3E-23 T 11-11-2016 S40542_RS14200 38f85fcf5cbd1bfb9d367a38be7345ca 334 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 2 331 38.675 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 S40542_RS14200 38f85fcf5cbd1bfb9d367a38be7345ca 334 SUPERFAMILY SSF52418 73 330 5.23E-93 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 S40542_RS14200 38f85fcf5cbd1bfb9d367a38be7345ca 334 Gene3D G3DSA:3.40.1030.10 73 333 1.2E-106 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 S40542_RS20335 c6c38d51833e5000a14ed9f12b40cd18 196 Pfam PF06080 Protein of unknown function (DUF938) 3 195 3.8E-65 T 11-11-2016 IPR010342 Protein of unknown function DUF938 S40542_RS20335 c6c38d51833e5000a14ed9f12b40cd18 196 Gene3D G3DSA:3.40.50.150 19 191 6.2E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS20335 c6c38d51833e5000a14ed9f12b40cd18 196 SUPERFAMILY SSF53335 16 185 2.07E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18565 1fb751db05896b5f11125c0e682344ba 191 Gene3D G3DSA:2.160.10.10 2 156 6.6E-42 T 11-11-2016 S40542_RS18565 1fb751db05896b5f11125c0e682344ba 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 51 75 3.1E-4 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS18565 1fb751db05896b5f11125c0e682344ba 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 49 3.2E-8 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS18565 1fb751db05896b5f11125c0e682344ba 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 136 6.0E-6 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS18565 1fb751db05896b5f11125c0e682344ba 191 SUPERFAMILY SSF51161 3 157 3.88E-44 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS02670 5f8e4fb09669c3294517684f0f07c1d5 320 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 11-11-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 S40542_RS02670 5f8e4fb09669c3294517684f0f07c1d5 320 SUPERFAMILY SSF53335 4 285 6.89E-75 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS02670 5f8e4fb09669c3294517684f0f07c1d5 320 TIGRFAM TIGR00417 speE: spermidine synthase 6 277 1.1E-78 T 11-11-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 S40542_RS02670 5f8e4fb09669c3294517684f0f07c1d5 320 Gene3D G3DSA:3.40.50.150 57 286 1.6E-67 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS02670 5f8e4fb09669c3294517684f0f07c1d5 320 Gene3D G3DSA:2.30.140.10 6 56 5.3E-12 T 11-11-2016 S40542_RS02670 5f8e4fb09669c3294517684f0f07c1d5 320 Pfam PF01564 Spermine/spermidine synthase 9 237 4.7E-61 T 11-11-2016 S40542_RS02670 5f8e4fb09669c3294517684f0f07c1d5 320 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 5 290 33.253 T 11-11-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Pfam PF00550 Phosphopantetheine attachment site 1572 1635 8.1E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Pfam PF00550 Phosphopantetheine attachment site 533 578 5.0E-7 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:3.40.50.980 1060 1208 6.7E-40 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Pfam PF13193 AMP-binding enzyme C-terminal domain 1471 1545 7.1E-7 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Pfam PF13193 AMP-binding enzyme C-terminal domain 417 492 3.9E-10 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1594 1609 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Pfam PF13745 HxxPF-repeated domain 920 1014 3.4E-13 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:3.40.50.980 166 316 4.2E-34 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:3.40.50.980 1209 1375 2.3E-46 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Pfam PF00668 Condensation domain 601 898 1.5E-54 T 11-11-2016 IPR001242 Condensation domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:2.30.38.10 1376 1453 2.1E-21 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:2.30.38.10 317 396 1.8E-20 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:3.30.300.30 1458 1573 1.3E-34 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 SMART SM00823 Phosphopantetheine attachment site 1570 1639 0.0033 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 SMART SM00823 Phosphopantetheine attachment site 520 586 0.012 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:3.30.300.30 403 502 2.7E-28 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 SUPERFAMILY SSF56801 1051 1583 8.63E-140 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1203 1214 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1085 1487 8.9E-122 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 38 429 7.1E-109 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:3.40.50.980 15 165 8.4E-34 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 SUPERFAMILY SSF52777 787 1042 5.26E-47 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 SUPERFAMILY SSF47336 1563 1635 6.94E-18 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:1.10.1200.10 534 585 4.7E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Gene3D G3DSA:1.10.1200.10 1574 1637 3.1E-23 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 SUPERFAMILY SSF47336 530 582 5.37E-8 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 SUPERFAMILY SSF56801 16 502 2.88E-114 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 SUPERFAMILY SSF52777 605 780 1.78E-32 T 11-11-2016 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Pfam PF00501 AMP-binding enzyme 1066 1463 4.3E-91 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS00880 c8f8481bf64b1ff8555e21591759228a 1661 Pfam PF00501 AMP-binding enzyme 22 409 1.4E-71 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS20530 e2882e565bc79e8e1ab37855f74b422b 233 SUPERFAMILY SSF52540 1 221 1.54E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20530 e2882e565bc79e8e1ab37855f74b422b 233 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS20530 e2882e565bc79e8e1ab37855f74b422b 233 Gene3D G3DSA:3.40.50.300 1 222 5.7E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20530 e2882e565bc79e8e1ab37855f74b422b 233 SMART SM00382 30 224 5.8E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS20530 e2882e565bc79e8e1ab37855f74b422b 233 Pfam PF00005 ABC transporter 21 169 6.1E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS01135 07511b30c5b970291de960444e89e89b 721 Gene3D G3DSA:1.10.10.160 114 189 7.7E-23 T 11-11-2016 IPR013986 DExx box DNA helicase domain S40542_RS01135 07511b30c5b970291de960444e89e89b 721 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 719 0.0 T 11-11-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 S40542_RS01135 07511b30c5b970291de960444e89e89b 721 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 9.5E-78 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 S40542_RS01135 07511b30c5b970291de960444e89e89b 721 Gene3D G3DSA:1.10.486.10 386 539 1.7E-47 T 11-11-2016 S40542_RS01135 07511b30c5b970291de960444e89e89b 721 Gene3D G3DSA:3.40.50.300 284 385 7.8E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01135 07511b30c5b970291de960444e89e89b 721 Gene3D G3DSA:3.40.50.300 550 640 7.8E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01135 07511b30c5b970291de960444e89e89b 721 Pfam PF13361 UvrD-like helicase C-terminal domain 275 614 1.5E-74 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 S40542_RS01135 07511b30c5b970291de960444e89e89b 721 SUPERFAMILY SSF52540 5 640 3.46E-178 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01135 07511b30c5b970291de960444e89e89b 721 Gene3D G3DSA:3.40.50.300 190 283 5.5E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01135 07511b30c5b970291de960444e89e89b 721 Gene3D G3DSA:3.40.50.300 4 110 5.5E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04665 cf06ade064468d0b8a4535338da648db 172 Pfam PF14437 MafB19-like deaminase 7 152 4.2E-32 T 11-11-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 S40542_RS04665 cf06ade064468d0b8a4535338da648db 172 Gene3D G3DSA:3.40.140.10 3 150 1.2E-61 T 11-11-2016 S40542_RS04665 cf06ade064468d0b8a4535338da648db 172 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 47.607 T 11-11-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 S40542_RS04665 cf06ade064468d0b8a4535338da648db 172 SUPERFAMILY SSF53927 4 156 5.86E-59 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 S40542_RS04665 cf06ade064468d0b8a4535338da648db 172 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 S40542_RS19645 154c4d977004a0c3e26f3b13cc2321f7 273 Pfam PF00797 N-acetyltransferase 23 254 7.3E-44 T 11-11-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 S40542_RS19645 154c4d977004a0c3e26f3b13cc2321f7 273 Gene3D G3DSA:3.30.2140.10 181 261 3.1E-35 T 11-11-2016 S40542_RS19645 154c4d977004a0c3e26f3b13cc2321f7 273 Gene3D G3DSA:3.30.2140.10 1 86 3.1E-35 T 11-11-2016 S40542_RS19645 154c4d977004a0c3e26f3b13cc2321f7 273 SUPERFAMILY SSF54001 2 263 1.62E-55 T 11-11-2016 S40542_RS14175 35759b90f2ffc1a69a212b083cbc6b29 266 Pfam PF02616 Segregation and condensation protein ScpA 50 262 1.9E-27 T 11-11-2016 IPR003768 Segregation and condensation protein A S40542_RS14175 35759b90f2ffc1a69a212b083cbc6b29 266 Hamap MF_01805 Segregation and condensation protein A [scpA]. 33 264 21.942 T 11-11-2016 IPR003768 Segregation and condensation protein A S40542_RS00480 1a9b85c00c687712cda4c9d03c4075eb 263 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 S40542_RS00480 1a9b85c00c687712cda4c9d03c4075eb 263 Pfam PF01026 TatD related DNase 5 255 4.3E-63 T 11-11-2016 IPR001130 TatD family GO:0016788 S40542_RS00480 1a9b85c00c687712cda4c9d03c4075eb 263 Gene3D G3DSA:3.20.20.140 3 255 2.2E-78 T 11-11-2016 S40542_RS00480 1a9b85c00c687712cda4c9d03c4075eb 263 PIRSF PIRSF005902 1 260 4.4E-68 T 11-11-2016 IPR001130 TatD family GO:0016788 S40542_RS00480 1a9b85c00c687712cda4c9d03c4075eb 263 SUPERFAMILY SSF51556 4 255 1.57E-76 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 8.1E-17 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 8.1E-17 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 8.1E-17 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 SUPERFAMILY SSF69189 280 372 9.81E-26 T 11-11-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 Gene3D G3DSA:2.60.410.10 280 370 1.0E-30 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 SUPERFAMILY SSF56601 8 280 6.61E-81 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 SMART SM00936 280 370 1.6E-35 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 1.9E-25 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 Gene3D G3DSA:3.40.710.10 29 279 1.1E-93 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS05620 f86bf0fd2374c58c65e77f0ba1bdaf7b 387 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 5.5E-88 T 11-11-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 S40542_RS12470 79c3fa425f054ea3234b9f522952261a 250 SMART SM00893 23 211 9.5E-65 T 11-11-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 S40542_RS12470 79c3fa425f054ea3234b9f522952261a 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-11-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105 S40542_RS12470 79c3fa425f054ea3234b9f522952261a 250 Gene3D G3DSA:3.40.50.620 1 244 2.8E-99 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS12470 79c3fa425f054ea3234b9f522952261a 250 PIRSF PIRSF000090 1 249 3.9E-80 T 11-11-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 S40542_RS12470 79c3fa425f054ea3234b9f522952261a 250 SUPERFAMILY SSF52402 1 242 2.15E-82 T 11-11-2016 S40542_RS12470 79c3fa425f054ea3234b9f522952261a 250 Pfam PF01012 Electron transfer flavoprotein domain 30 206 3.5E-44 T 11-11-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 S40542_RS14130 4d1ac6d3f1dfe4359ea3682b810bda58 457 SUPERFAMILY SSF63829 312 437 8.11E-8 T 11-11-2016 S40542_RS14130 4d1ac6d3f1dfe4359ea3682b810bda58 457 SUPERFAMILY SSF63829 190 254 8.11E-8 T 11-11-2016 S40542_RS14130 4d1ac6d3f1dfe4359ea3682b810bda58 457 Pfam PF05787 Bacterial protein of unknown function (DUF839) 40 127 2.1E-9 T 11-11-2016 IPR008557 Protein of unknown function DUF839 S40542_RS14130 4d1ac6d3f1dfe4359ea3682b810bda58 457 Pfam PF05787 Bacterial protein of unknown function (DUF839) 142 442 7.6E-55 T 11-11-2016 IPR008557 Protein of unknown function DUF839 S40542_RS09650 9143e39844a61a41623529439b671bff 295 SUPERFAMILY SSF51735 1 284 5.22E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09650 9143e39844a61a41623529439b671bff 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 163 7.3E-21 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 S40542_RS09650 9143e39844a61a41623529439b671bff 295 Gene3D G3DSA:3.40.50.720 1 210 8.0E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15025 ad9018e05163d5a3dba55febde58f8a5 214 SUPERFAMILY SSF109604 3 212 1.28E-61 T 11-11-2016 S40542_RS15025 ad9018e05163d5a3dba55febde58f8a5 214 SMART SM00471 23 140 6.5E-5 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS15025 ad9018e05163d5a3dba55febde58f8a5 214 Pfam PF01966 HD domain 29 130 4.2E-9 T 11-11-2016 IPR006674 HD domain S40542_RS15025 ad9018e05163d5a3dba55febde58f8a5 214 Gene3D G3DSA:1.10.3210.10 6 144 5.0E-43 T 11-11-2016 IPR006674 HD domain S40542_RS15025 ad9018e05163d5a3dba55febde58f8a5 214 Gene3D G3DSA:1.10.3210.10 183 211 5.0E-43 T 11-11-2016 IPR006674 HD domain S40542_RS09630 677a6ad19391b66e4533eb1dbca633b3 377 Pfam PF00155 Aminotransferase class I and II 40 371 3.5E-55 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS09630 677a6ad19391b66e4533eb1dbca633b3 377 Gene3D G3DSA:3.90.1150.10 264 376 1.7E-23 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS09630 677a6ad19391b66e4533eb1dbca633b3 377 Gene3D G3DSA:3.40.640.10 61 263 6.5E-73 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS09630 677a6ad19391b66e4533eb1dbca633b3 377 SUPERFAMILY SSF53383 2 376 2.64E-87 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS09630 677a6ad19391b66e4533eb1dbca633b3 377 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 228 237 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 S40542_RS00230 dd613d1eadd065059b9d30a7d9c6a96d 280 Gene3D G3DSA:3.40.50.1820 31 278 7.7E-59 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00230 dd613d1eadd065059b9d30a7d9c6a96d 280 SUPERFAMILY SSF53474 23 278 1.22E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00230 dd613d1eadd065059b9d30a7d9c6a96d 280 Pfam PF00756 Putative esterase 44 198 6.0E-15 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 Gene3D G3DSA:1.10.10.60 395 474 6.0E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 136 6.5E-21 T 11-11-2016 IPR000014 PAS domain S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 Gene3D G3DSA:3.30.450.20 14 127 2.8E-24 T 11-11-2016 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 256 271 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 SMART SM00382 190 334 6.6E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 Pfam PF00158 Sigma-54 interaction domain 170 337 1.5E-71 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 Gene3D G3DSA:1.10.8.60 343 394 7.1E-19 T 11-11-2016 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 SUPERFAMILY SSF52540 170 405 9.26E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 SMART SM00086 89 129 3.0E-6 T 11-11-2016 IPR001610 PAC motif S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 SUPERFAMILY SSF55785 21 138 4.89E-24 T 11-11-2016 IPR000014 PAS domain S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 Pfam PF02954 Bacterial regulatory protein, Fis family 428 471 1.5E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 Gene3D G3DSA:3.40.50.300 169 342 3.2E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 SUPERFAMILY SSF46689 381 474 1.84E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 383 392 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 Pfam PF00989 PAS fold 12 126 2.9E-14 T 11-11-2016 IPR013767 PAS fold GO:0006355 S40542_RS09155 b83f2accdf76c350a94738ce650a76bc 479 SMART SM00091 10 75 3.8E-6 T 11-11-2016 IPR000014 PAS domain S40542_RS13275 83e72caee47439e3620430a044f248f8 220 SUPERFAMILY SSF48371 19 211 2.3E-39 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 S40542_RS13275 83e72caee47439e3620430a044f248f8 220 Gene3D G3DSA:1.25.40.290 115 212 3.2E-15 T 11-11-2016 S40542_RS13275 83e72caee47439e3620430a044f248f8 220 Pfam PF08713 DNA alkylation repair enzyme 21 209 2.0E-37 T 11-11-2016 IPR014825 DNA alkylation repair enzyme S40542_RS15315 214f5b032d32507c475409ac35d22af9 181 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 179 1.4E-53 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 S40542_RS15315 214f5b032d32507c475409ac35d22af9 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 70 8.6E-19 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 S40542_RS15315 214f5b032d32507c475409ac35d22af9 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 S40542_RS15315 214f5b032d32507c475409ac35d22af9 181 PIRSF PIRSF000847 1 180 1.6E-44 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 S40542_RS13065 0a83acf4e67c90b7305a188d4450c638 130 Gene3D G3DSA:1.10.443.10 39 84 4.8E-5 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS13065 0a83acf4e67c90b7305a188d4450c638 130 SUPERFAMILY SSF56349 29 106 5.59E-6 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS05680 fd5d93e25d409f27d9947311cf0741b5 159 SUPERFAMILY SSF54534 22 158 4.32E-44 T 11-11-2016 S40542_RS05680 fd5d93e25d409f27d9947311cf0741b5 159 Gene3D G3DSA:3.10.50.40 25 158 2.2E-45 T 11-11-2016 S40542_RS05680 fd5d93e25d409f27d9947311cf0741b5 159 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 23 61 7.9E-11 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 S40542_RS05680 fd5d93e25d409f27d9947311cf0741b5 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 68 156 2.9E-22 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 S40542_RS09380 922b78771994ad136436484b93f2b047 72 Pfam PF00313 'Cold-shock' DNA-binding domain 4 65 2.0E-26 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 S40542_RS09380 922b78771994ad136436484b93f2b047 72 SMART SM00357 3 67 1.4E-21 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 S40542_RS09380 922b78771994ad136436484b93f2b047 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-11-2016 IPR019844 Cold-shock conserved site S40542_RS09380 922b78771994ad136436484b93f2b047 72 SUPERFAMILY SSF50249 1 65 1.57E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09380 922b78771994ad136436484b93f2b047 72 Gene3D G3DSA:2.40.50.140 2 65 1.5E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09380 922b78771994ad136436484b93f2b047 72 PIRSF PIRSF002599 1 71 5.5E-22 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 S40542_RS09380 922b78771994ad136436484b93f2b047 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 3.6E-38 T 11-11-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 S40542_RS09380 922b78771994ad136436484b93f2b047 72 PRINTS PR00050 Cold shock protein signature 40 58 3.5E-15 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 S40542_RS09380 922b78771994ad136436484b93f2b047 72 PRINTS PR00050 Cold shock protein signature 4 19 3.5E-15 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 S40542_RS09380 922b78771994ad136436484b93f2b047 72 PRINTS PR00050 Cold shock protein signature 25 34 3.5E-15 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 S40542_RS07780 c44e91dc1981cbeb4af99d247d5a521c 218 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS07780 c44e91dc1981cbeb4af99d247d5a521c 218 Gene3D G3DSA:3.40.50.300 1 216 2.5E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07780 c44e91dc1981cbeb4af99d247d5a521c 218 SMART SM00382 30 215 2.3E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS07780 c44e91dc1981cbeb4af99d247d5a521c 218 SUPERFAMILY SSF52540 1 217 1.16E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07780 c44e91dc1981cbeb4af99d247d5a521c 218 Pfam PF00005 ABC transporter 22 166 2.1E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS06670 9d987eb994f77f8ee7ed7384d95babd9 150 SUPERFAMILY SSF54637 7 146 1.06E-49 T 11-11-2016 IPR029069 HotDog domain S40542_RS06670 9d987eb994f77f8ee7ed7384d95babd9 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 35.284 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS06670 9d987eb994f77f8ee7ed7384d95babd9 150 Pfam PF07977 FabA-like domain 17 141 5.2E-35 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS06670 9d987eb994f77f8ee7ed7384d95babd9 150 Gene3D G3DSA:3.10.129.10 5 147 1.6E-58 T 11-11-2016 IPR029069 HotDog domain S40542_RS06670 9d987eb994f77f8ee7ed7384d95babd9 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.5E-60 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS04290 8edf69414c80cc967ea279f42cb87c64 300 Pfam PF00892 EamA-like transporter family 10 143 6.5E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS04290 8edf69414c80cc967ea279f42cb87c64 300 SUPERFAMILY SSF103481 65 146 3.4E-10 T 11-11-2016 S40542_RS04290 8edf69414c80cc967ea279f42cb87c64 300 TIGRFAM TIGR00688 rarD: protein RarD 9 262 8.0E-81 T 11-11-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 S40542_RS04290 8edf69414c80cc967ea279f42cb87c64 300 SUPERFAMILY SSF103481 195 289 1.44E-8 T 11-11-2016 S40542_RS00225 8ad8c506743e395f73576d7a08d11a52 437 SUPERFAMILY SSF51261 132 387 1.73E-60 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS00225 8ad8c506743e395f73576d7a08d11a52 437 Pfam PF01551 Peptidase family M23 289 385 9.7E-33 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS00225 8ad8c506743e395f73576d7a08d11a52 437 Gene3D G3DSA:2.70.70.10 243 388 3.7E-48 T 11-11-2016 S40542_RS09310 e17c2ff2c95a9bc73853f6d4da2dbd82 168 Gene3D G3DSA:2.30.30.40 92 146 3.6E-6 T 11-11-2016 S40542_RS09310 e17c2ff2c95a9bc73853f6d4da2dbd82 168 Pfam PF01584 CheW-like domain 16 153 4.0E-28 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS09310 e17c2ff2c95a9bc73853f6d4da2dbd82 168 SMART SM00260 11 152 7.0E-28 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS09310 e17c2ff2c95a9bc73853f6d4da2dbd82 168 Gene3D G3DSA:2.40.50.180 55 89 3.0E-6 T 11-11-2016 S40542_RS09310 e17c2ff2c95a9bc73853f6d4da2dbd82 168 SUPERFAMILY SSF50341 14 154 5.75E-31 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS18225 41cb217adb904aa48f6c87d8b4c5216b 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 160 166 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS18225 41cb217adb904aa48f6c87d8b4c5216b 278 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 271 1.6E-76 T 11-11-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 S40542_RS18225 41cb217adb904aa48f6c87d8b4c5216b 278 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 265 38.228 T 11-11-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 S40542_RS18225 41cb217adb904aa48f6c87d8b4c5216b 278 Gene3D G3DSA:3.40.50.150 1 273 5.4E-103 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18225 41cb217adb904aa48f6c87d8b4c5216b 278 SUPERFAMILY SSF53335 9 274 1.17E-83 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18225 41cb217adb904aa48f6c87d8b4c5216b 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 240 246 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 SMART SM00089 641 729 0.0023 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 SMART SM00020 47 276 1.4E-69 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 Gene3D G3DSA:2.40.10.10 83 276 2.5E-56 T 11-11-2016 S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 84 89 - T 11-11-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 227 238 - T 11-11-2016 IPR033116 Serine proteases, trypsin family, serine active site S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 SUPERFAMILY SSF50494 16 277 7.48E-72 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 SUPERFAMILY SSF49299 636 729 9.81E-7 T 11-11-2016 IPR000601 PKD domain S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 Gene3D G3DSA:2.40.10.10 48 82 1.6E-12 T 11-11-2016 S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 74 89 1.6E-10 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 226 238 1.6E-10 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 134 148 1.6E-10 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 Gene3D G3DSA:2.60.40.10 615 727 5.1E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS06805 1f0ef59a82c3dd5bda119f7fdad0bd58 764 Pfam PF00089 Trypsin 48 276 7.7E-54 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 S40542_RS18645 2c1a856cf8128958f77f54eee7a4a55b 374 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 372 1.9E-158 T 11-11-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 S40542_RS18645 2c1a856cf8128958f77f54eee7a4a55b 374 Gene3D G3DSA:3.40.50.2000 2 213 4.9E-85 T 11-11-2016 S40542_RS18645 2c1a856cf8128958f77f54eee7a4a55b 374 SUPERFAMILY SSF53756 4 373 7.18E-136 T 11-11-2016 S40542_RS18645 2c1a856cf8128958f77f54eee7a4a55b 374 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 372 2.2E-125 T 11-11-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 S40542_RS18645 2c1a856cf8128958f77f54eee7a4a55b 374 Gene3D G3DSA:3.40.50.2000 214 373 3.3E-67 T 11-11-2016 S40542_RS06105 3409ce5464fb0990bde0a50f6fb3ee1c 262 Pfam PF00460 Flagella basal body rod protein 5 35 2.2E-11 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 S40542_RS06105 3409ce5464fb0990bde0a50f6fb3ee1c 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 2.8E-25 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain S40542_RS06105 3409ce5464fb0990bde0a50f6fb3ee1c 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site S40542_RS06105 3409ce5464fb0990bde0a50f6fb3ee1c 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 2.0E-41 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G S40542_RS06105 3409ce5464fb0990bde0a50f6fb3ee1c 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 2.8E-29 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G S40542_RS06105 3409ce5464fb0990bde0a50f6fb3ee1c 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 2.0E-108 T 11-11-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 S40542_RS06105 3409ce5464fb0990bde0a50f6fb3ee1c 262 SUPERFAMILY SSF117143 92 223 6.93E-32 T 11-11-2016 S40542_RS00860 d04bcc5a8e980416b4108afff392a6ee 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 19 208 5.5E-37 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 S40542_RS00860 d04bcc5a8e980416b4108afff392a6ee 218 SUPERFAMILY SSF56529 14 210 9.94E-52 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 S40542_RS00860 d04bcc5a8e980416b4108afff392a6ee 218 Gene3D G3DSA:3.90.850.10 15 210 3.3E-58 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.004 T 11-11-2016 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 Pfam PF01467 Cytidylyltransferase-like 6 134 8.6E-21 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 3.8E-18 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.058 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 SUPERFAMILY SSF52374 4 157 1.33E-46 T 11-11-2016 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 Gene3D G3DSA:3.40.50.620 1 157 1.6E-55 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.2E-49 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.2E-49 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.2E-49 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.2E-49 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.2E-49 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 S40542_RS18335 8a9838154f767d22792d46d0e0dde983 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 1.7E-60 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 Pfam PF03924 CHASE domain 92 187 6.3E-15 T 11-11-2016 IPR006189 CHASE domain S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 Pfam PF00989 PAS fold 280 344 4.6E-8 T 11-11-2016 IPR013767 PAS fold GO:0006355 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 SMART SM00091 279 345 1.6E-4 T 11-11-2016 IPR000014 PAS domain S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 SUPERFAMILY SSF55785 290 404 1.43E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 281 403 1.9E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 SMART SM00388 418 486 1.3E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 578 1.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 616 1.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 1.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 SUPERFAMILY SSF55874 476 634 4.32E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 SUPERFAMILY SSF47384 404 485 3.53E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 634 7.5E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 Gene3D G3DSA:3.30.565.10 475 634 1.8E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 SMART SM00387 528 638 1.0E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 Gene3D G3DSA:1.10.287.130 410 474 2.9E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 Gene3D G3DSA:3.30.450.20 281 396 1.6E-12 T 11-11-2016 S40542_RS07805 a8d7e35ecdb07e2fcd0d0f5917350ad1 642 SMART SM01079 62 200 3.8E-21 T 11-11-2016 IPR006189 CHASE domain S40542_RS05605 995a84553b38e72d50aa14a4c1bb0ab4 321 SUPERFAMILY SSF102114 50 314 5.62E-67 T 11-11-2016 S40542_RS05605 995a84553b38e72d50aa14a4c1bb0ab4 321 SMART SM00729 84 292 1.3E-21 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 S40542_RS05605 995a84553b38e72d50aa14a4c1bb0ab4 321 Gene3D G3DSA:3.20.20.70 55 313 1.0E-68 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS05605 995a84553b38e72d50aa14a4c1bb0ab4 321 PIRSF PIRSF005963 2 321 1.0E-129 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 S40542_RS05605 995a84553b38e72d50aa14a4c1bb0ab4 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 30 73 1.5E-6 T 11-11-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 S40542_RS05605 995a84553b38e72d50aa14a4c1bb0ab4 321 Pfam PF04055 Radical SAM superfamily 91 252 4.2E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS05605 995a84553b38e72d50aa14a4c1bb0ab4 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 320 6.7E-148 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 S40542_RS05605 995a84553b38e72d50aa14a4c1bb0ab4 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 154.701 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 S40542_RS11985 0cb841c97790e848b7407fdc037b7d1a 211 Pfam PF14065 Protein of unknown function (DUF4255) 10 191 1.1E-22 T 11-11-2016 IPR025351 Protein of unknown function DUF4255 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 TIGRFAM TIGR00492 alr: alanine racemase 4 357 2.5E-121 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 Gene3D G3DSA:2.40.37.10 210 359 3.9E-55 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 SUPERFAMILY SSF51419 8 234 7.98E-70 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 SUPERFAMILY SSF50621 226 359 3.84E-45 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.7E-66 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 Hamap MF_01201 Alanine racemase. 1 358 34.424 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 155 166 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 249 264 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 266 281 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 26 42 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 340 353 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 60 78 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 120 132 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 287 304 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 PRINTS PR00992 Alanine racemase signature 192 219 2.0E-69 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 Pfam PF00842 Alanine racemase, C-terminal domain 233 355 1.1E-38 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 11-11-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 SMART SM01005 233 358 2.8E-61 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 S40542_RS01755 0884d7496e2b9b3767cf66e9863c2cd6 360 Gene3D G3DSA:3.20.20.10 11 209 2.0E-71 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS11230 204913c018e4946a08a45a24d22e568b 191 Gene3D G3DSA:3.40.140.10 35 172 7.9E-32 T 11-11-2016 S40542_RS11230 204913c018e4946a08a45a24d22e568b 191 SUPERFAMILY SSF53927 41 167 4.02E-32 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 S40542_RS11230 204913c018e4946a08a45a24d22e568b 191 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 92 125 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 S40542_RS11230 204913c018e4946a08a45a24d22e568b 191 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 41 136 1.3E-18 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 S40542_RS14755 64a5e1d78fda371f202372ffaea73821 112 PIRSF PIRSF005894 1 107 3.3E-51 T 11-11-2016 IPR014434 Monothiol glutaredoxin S40542_RS14755 64a5e1d78fda371f202372ffaea73821 112 Pfam PF00462 Glutaredoxin 16 80 1.3E-16 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 S40542_RS14755 64a5e1d78fda371f202372ffaea73821 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.5E-45 T 11-11-2016 IPR004480 Monothiol glutaredoxin-related S40542_RS14755 64a5e1d78fda371f202372ffaea73821 112 Gene3D G3DSA:3.40.30.10 7 101 1.4E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS14755 64a5e1d78fda371f202372ffaea73821 112 SUPERFAMILY SSF52833 1 102 3.92E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS16035 689797707f8aa8b4234db8aa945c252d 776 SMART SM00490 218 313 1.9E-11 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS16035 689797707f8aa8b4234db8aa945c252d 776 Pfam PF04408 Helicase associated domain (HA2) 371 429 4.2E-5 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 S40542_RS16035 689797707f8aa8b4234db8aa945c252d 776 Gene3D G3DSA:3.40.50.300 199 332 1.5E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16035 689797707f8aa8b4234db8aa945c252d 776 SUPERFAMILY SSF52540 16 323 2.99E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16035 689797707f8aa8b4234db8aa945c252d 776 Pfam PF00270 DEAD/DEAH box helicase 15 150 5.5E-9 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS16035 689797707f8aa8b4234db8aa945c252d 776 SMART SM00487 1 175 1.2E-16 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS16035 689797707f8aa8b4234db8aa945c252d 776 Gene3D G3DSA:3.40.50.300 3 148 2.8E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16035 689797707f8aa8b4234db8aa945c252d 776 Pfam PF00271 Helicase conserved C-terminal domain 200 312 2.9E-11 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS06410 994ff9bc6c65dc768ce79a98762ff10a 131 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 49 123 3.9E-33 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 S40542_RS06410 994ff9bc6c65dc768ce79a98762ff10a 131 Gene3D G3DSA:2.30.330.10 42 131 1.9E-37 T 11-11-2016 S40542_RS06410 994ff9bc6c65dc768ce79a98762ff10a 131 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 51 121 2.2E-24 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) S40542_RS06410 994ff9bc6c65dc768ce79a98762ff10a 131 PRINTS PR00956 Flagellar motor switch protein FliN signature 97 112 3.6E-28 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 S40542_RS06410 994ff9bc6c65dc768ce79a98762ff10a 131 PRINTS PR00956 Flagellar motor switch protein FliN signature 51 67 3.6E-28 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 S40542_RS06410 994ff9bc6c65dc768ce79a98762ff10a 131 PRINTS PR00956 Flagellar motor switch protein FliN signature 68 84 3.6E-28 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 S40542_RS06410 994ff9bc6c65dc768ce79a98762ff10a 131 PRINTS PR00956 Flagellar motor switch protein FliN signature 84 97 3.6E-28 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 S40542_RS06410 994ff9bc6c65dc768ce79a98762ff10a 131 SUPERFAMILY SSF101801 48 129 2.49E-24 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) S40542_RS17200 3c6432a754b792f65568e903802a2e16 105 Gene3D G3DSA:1.20.1440.40 3 101 2.2E-34 T 11-11-2016 IPR023376 YqcC-like domain S40542_RS17200 3c6432a754b792f65568e903802a2e16 105 SUPERFAMILY SSF158452 3 103 7.19E-35 T 11-11-2016 IPR023376 YqcC-like domain S40542_RS17200 3c6432a754b792f65568e903802a2e16 105 PIRSF PIRSF006257 1 105 4.5E-34 T 11-11-2016 IPR007384 Protein of unknown function UCP006257 S40542_RS17200 3c6432a754b792f65568e903802a2e16 105 Pfam PF04287 tRNA pseudouridine synthase C 5 100 8.1E-33 T 11-11-2016 IPR023376 YqcC-like domain S40542_RS15610 4c83931945b13966049666426e7e322d 595 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 4.2E-53 T 11-11-2016 S40542_RS15610 4c83931945b13966049666426e7e322d 595 SUPERFAMILY SSF54980 398 492 7.67E-25 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS15610 4c83931945b13966049666426e7e322d 595 Hamap MF_00071 Elongation factor 4 [lepA]. 1 595 302.581 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 S40542_RS15610 4c83931945b13966049666426e7e322d 595 Pfam PF00679 Elongation factor G C-terminus 398 479 2.1E-20 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS15610 4c83931945b13966049666426e7e322d 595 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.5E-9 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 S40542_RS15610 4c83931945b13966049666426e7e322d 595 SMART SM00838 397 484 0.0067 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS15610 4c83931945b13966049666426e7e322d 595 Gene3D G3DSA:3.30.70.240 400 488 1.7E-21 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS15610 4c83931945b13966049666426e7e322d 595 SUPERFAMILY SSF54980 292 370 1.51E-18 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS15610 4c83931945b13966049666426e7e322d 595 Gene3D G3DSA:3.40.50.300 2 192 4.6E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15610 4c83931945b13966049666426e7e322d 595 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site S40542_RS15610 4c83931945b13966049666426e7e322d 595 Pfam PF06421 GTP-binding protein LepA C-terminus 486 592 1.4E-48 T 11-11-2016 IPR013842 GTP-binding protein LepA, C-terminal S40542_RS15610 4c83931945b13966049666426e7e322d 595 Gene3D G3DSA:3.30.70.870 291 369 8.3E-26 T 11-11-2016 S40542_RS15610 4c83931945b13966049666426e7e322d 595 SUPERFAMILY SSF52540 2 230 1.16E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15610 4c83931945b13966049666426e7e322d 595 SUPERFAMILY SSF52540 262 283 1.16E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15610 4c83931945b13966049666426e7e322d 595 Gene3D G3DSA:2.40.30.10 193 289 6.6E-23 T 11-11-2016 S40542_RS15610 4c83931945b13966049666426e7e322d 595 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.7E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS15610 4c83931945b13966049666426e7e322d 595 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.7E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS15610 4c83931945b13966049666426e7e322d 595 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.7E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS15610 4c83931945b13966049666426e7e322d 595 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.7E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS15610 4c83931945b13966049666426e7e322d 595 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.7E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS15610 4c83931945b13966049666426e7e322d 595 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 9.4E-18 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS15610 4c83931945b13966049666426e7e322d 595 TIGRFAM TIGR01393 lepA: elongation factor 4 2 593 1.9E-299 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 S40542_RS15155 d405e689a92078adc9b9811041053541 1405 SMART SM00490 1266 1348 2.7E-25 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS15155 d405e689a92078adc9b9811041053541 1405 Gene3D G3DSA:3.40.50.300 929 1107 1.2E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15155 d405e689a92078adc9b9811041053541 1405 Pfam PF00176 SNF2 family N-terminal domain 954 1227 3.7E-58 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 S40542_RS15155 d405e689a92078adc9b9811041053541 1405 Gene3D G3DSA:3.40.50.300 1236 1379 1.1E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15155 d405e689a92078adc9b9811041053541 1405 SMART SM00487 934 1118 6.0E-31 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS15155 d405e689a92078adc9b9811041053541 1405 Pfam PF00271 Helicase conserved C-terminal domain 1239 1348 2.4E-19 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS15155 d405e689a92078adc9b9811041053541 1405 SUPERFAMILY SSF52540 915 1154 7.22E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15155 d405e689a92078adc9b9811041053541 1405 SUPERFAMILY SSF52540 1156 1401 4.87E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SUPERFAMILY SSF48452 803 943 2.1E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 Gene3D G3DSA:1.25.40.10 795 976 4.4E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SMART SM00028 800 833 50.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SMART SM00028 1085 1118 130.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SMART SM00028 1126 1159 230.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SMART SM00028 1030 1063 100.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SMART SM00028 844 877 120.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 Gene3D G3DSA:1.25.40.10 1026 1160 9.3E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 Gene3D G3DSA:3.30.230.10 89 198 1.2E-7 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SUPERFAMILY SSF48452 1026 1158 2.1E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SUPERFAMILY SSF54211 54 198 1.48E-8 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 SUPERFAMILY SSF52540 223 430 6.69E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15260 a51cac1ed1620393c026bef96e3ea8bb 1185 Gene3D G3DSA:3.40.50.300 222 389 8.7E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19205 13dbcee60fea039ce4d2c63746f4b23d 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 6.0E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS19205 13dbcee60fea039ce4d2c63746f4b23d 234 SMART SM00448 3 118 1.1E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS19205 13dbcee60fea039ce4d2c63746f4b23d 234 SUPERFAMILY SSF46894 129 232 3.61E-23 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS19205 13dbcee60fea039ce4d2c63746f4b23d 234 Gene3D G3DSA:3.40.50.2300 2 133 1.8E-26 T 11-11-2016 S40542_RS19205 13dbcee60fea039ce4d2c63746f4b23d 234 SUPERFAMILY SSF52172 2 126 1.42E-24 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS19205 13dbcee60fea039ce4d2c63746f4b23d 234 Gene3D G3DSA:1.10.10.10 134 233 5.8E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS19205 13dbcee60fea039ce4d2c63746f4b23d 234 Pfam PF00072 Response regulator receiver domain 5 116 6.8E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS19205 13dbcee60fea039ce4d2c63746f4b23d 234 SMART SM00862 157 232 4.1E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS01980 518a0dd9db246fd871364d652f9f1ce4 207 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 22 179 27.426 T 11-11-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 S40542_RS01980 518a0dd9db246fd871364d652f9f1ce4 207 Pfam PF03975 CheD chemotactic sensory transduction 69 175 2.7E-27 T 11-11-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 S40542_RS01980 518a0dd9db246fd871364d652f9f1ce4 207 SUPERFAMILY SSF64438 27 181 4.49E-46 T 11-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 SUPERFAMILY SSF52922 536 662 1.44E-43 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 11-11-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 SUPERFAMILY SSF52518 5 320 4.61E-120 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 Gene3D G3DSA:3.40.50.970 328 534 7.7E-77 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 Gene3D G3DSA:3.40.50.920 539 662 6.2E-49 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 Pfam PF02779 Transketolase, pyrimidine binding domain 355 525 8.5E-42 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 SUPERFAMILY SSF52518 335 527 1.77E-65 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 SMART SM00861 355 527 1.7E-61 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 Pfam PF02780 Transketolase, C-terminal domain 548 655 1.6E-18 T 11-11-2016 IPR033248 Transketolase, C-terminal domain S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 Gene3D G3DSA:3.40.50.970 5 322 2.6E-133 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS05710 a592b6f30b7fd4d96253d5fabbea697e 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 6.9E-167 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 SUPERFAMILY SSF49265 194 277 9.56E-7 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 Gene3D G3DSA:2.60.40.10 195 273 1.2E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 1336 1371 9.3E-8 T 11-11-2016 IPR013431 Delta-60 repeat S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 SUPERFAMILY SSF49313 969 1055 1.49E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1762 1802 3.1E-6 T 11-11-2016 IPR013431 Delta-60 repeat S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1328 1381 2.7E-13 T 11-11-2016 IPR013431 Delta-60 repeat S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1158 1208 1.3E-8 T 11-11-2016 IPR013431 Delta-60 repeat S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1093 1140 9.3E-4 T 11-11-2016 IPR013431 Delta-60 repeat S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1710 1749 0.0032 T 11-11-2016 IPR013431 Delta-60 repeat S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 SMART SM00112 985 1056 0.0098 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS12330 54a44ac1c7c1d0d00a4bc2703b541ed0 1904 Gene3D G3DSA:2.60.40.60 969 1055 8.3E-13 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS20095 f0d4d4b5fa2f6e70eef581fccbe8fad9 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 2.4E-105 T 11-11-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 S40542_RS20095 f0d4d4b5fa2f6e70eef581fccbe8fad9 331 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.657 T 11-11-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 S40542_RS20095 f0d4d4b5fa2f6e70eef581fccbe8fad9 331 SUPERFAMILY SSF51556 5 326 2.85E-69 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS20095 f0d4d4b5fa2f6e70eef581fccbe8fad9 331 Pfam PF00962 Adenosine/AMP deaminase 6 328 9.6E-81 T 11-11-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 S40542_RS20095 f0d4d4b5fa2f6e70eef581fccbe8fad9 331 Gene3D G3DSA:3.20.20.140 4 330 4.8E-94 T 11-11-2016 S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 682 699 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 SUPERFAMILY SSF56935 27 699 1.31E-118 T 11-11-2016 S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 Pfam PF00593 TonB dependent receptor 444 698 3.7E-36 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 ProSitePatterns PS00018 EF-hand calcium-binding domain. 251 263 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 152 1.4E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 Gene3D G3DSA:2.170.130.10 27 155 2.6E-33 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 31 699 2.0E-110 T 11-11-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 33 699 6.0E-114 T 11-11-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 S40542_RS15815 7efff71959f36b27dfe52b25ef498966 699 Gene3D G3DSA:2.40.170.20 156 699 2.1E-99 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10845 053351f6343d0aa72314cfbeecc71106 172 SMART SM00100 1 114 4.6E-10 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS10845 053351f6343d0aa72314cfbeecc71106 172 Gene3D G3DSA:2.60.120.10 6 139 4.6E-24 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS10845 053351f6343d0aa72314cfbeecc71106 172 Pfam PF00027 Cyclic nucleotide-binding domain 15 100 3.0E-15 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS10845 053351f6343d0aa72314cfbeecc71106 172 SUPERFAMILY SSF51206 2 127 3.01E-24 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS18465 0689f75d09976f2ebb323ff0c36dd3bc 182 Pfam PF02397 Bacterial sugar transferase 3 173 9.7E-47 T 11-11-2016 IPR003362 Bacterial sugar transferase S40542_RS08065 c28b246d877123641efe8e83e027fe66 193 SUPERFAMILY SSF50475 13 180 2.28E-20 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS08065 c28b246d877123641efe8e83e027fe66 193 Pfam PF04299 Putative FMN-binding domain 3 157 7.1E-26 T 11-11-2016 IPR007396 Transcriptional regulator PAI 2-type S40542_RS08065 c28b246d877123641efe8e83e027fe66 193 PIRSF PIRSF010372 2 192 1.5E-32 T 11-11-2016 IPR007396 Transcriptional regulator PAI 2-type S40542_RS08065 c28b246d877123641efe8e83e027fe66 193 Gene3D G3DSA:2.30.110.10 3 186 1.0E-37 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS11520 1e47ca73ec289ed05bfa70bc51288fdd 251 SUPERFAMILY SSF53448 3 245 3.52E-56 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS11520 1e47ca73ec289ed05bfa70bc51288fdd 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 243 1.9E-90 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 S40542_RS11520 1e47ca73ec289ed05bfa70bc51288fdd 251 Gene3D G3DSA:3.90.550.10 3 249 1.9E-70 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS11520 1e47ca73ec289ed05bfa70bc51288fdd 251 Pfam PF02348 Cytidylyltransferase 4 223 2.8E-59 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 S40542_RS11520 1e47ca73ec289ed05bfa70bc51288fdd 251 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 250 40.882 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 S40542_RS20660 c3d2583075f017d3b528b6a283475231 114 SUPERFAMILY SSF54427 3 103 6.07E-5 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS20660 c3d2583075f017d3b528b6a283475231 114 Gene3D G3DSA:3.10.450.100 5 103 6.0E-4 T 11-11-2016 S40542_RS06445 663721e1f99725c081a4229f8407dc80 504 Pfam PF00448 SRP54-type protein, GTPase domain 288 476 9.2E-42 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS06445 663721e1f99725c081a4229f8407dc80 504 SMART SM00382 285 456 1.8E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS06445 663721e1f99725c081a4229f8407dc80 504 SUPERFAMILY SSF52540 282 475 4.7E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06445 663721e1f99725c081a4229f8407dc80 504 Gene3D G3DSA:1.20.120.140 257 297 3.1E-6 T 11-11-2016 S40542_RS06445 663721e1f99725c081a4229f8407dc80 504 SMART SM00962 286 479 1.3E-69 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS06445 663721e1f99725c081a4229f8407dc80 504 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 374 2.0E-85 T 11-11-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 S40542_RS06445 663721e1f99725c081a4229f8407dc80 504 Gene3D G3DSA:3.40.50.300 298 476 3.6E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Gene3D G3DSA:3.90.580.10 2 101 2.8E-39 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 SMART SM00400 36 90 1.6E-38 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 254 2.3E-43 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Gene3D G3DSA:1.10.860.10 436 578 7.0E-42 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Pfam PF08278 DNA primase DnaG DnaB-binding 450 570 5.2E-27 T 11-11-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Gene3D G3DSA:3.40.1360.10 243 364 3.7E-44 T 11-11-2016 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Gene3D G3DSA:3.90.980.10 117 242 1.7E-43 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Pfam PF01807 CHC2 zinc finger 6 101 7.3E-40 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 SMART SM00493 261 332 6.0E-20 T 11-11-2016 IPR006171 Toprim domain S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 SUPERFAMILY SSF56731 117 425 1.44E-102 T 11-11-2016 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Pfam PF13662 Toprim domain 262 326 2.0E-13 T 11-11-2016 IPR006171 Toprim domain S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 SUPERFAMILY SSF57783 5 100 1.36E-36 T 11-11-2016 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 2.0E-144 T 11-11-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Gene3D G3DSA:1.20.50.20 373 427 1.6E-16 T 11-11-2016 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 PIRSF PIRSF002811 2 582 8.0E-145 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 SMART SM00766 449 574 5.0E-32 T 11-11-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Hamap MF_00974 DNA primase [dnaG]. 4 574 28.944 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 Pfam PF10410 DnaB-helicase binding domain of primase 374 423 1.7E-10 T 11-11-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 S40542_RS18015 ea7f768d78ff7976472e6a9011fbdd81 585 SUPERFAMILY SSF117023 446 577 3.01E-37 T 11-11-2016 S40542_RS10660 6f2251b724e194546fd10c6b951ea6eb 169 Pfam PF01625 Peptide methionine sulfoxide reductase 7 140 7.6E-19 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10660 6f2251b724e194546fd10c6b951ea6eb 169 Gene3D G3DSA:3.30.1060.10 5 148 1.6E-24 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10660 6f2251b724e194546fd10c6b951ea6eb 169 SUPERFAMILY SSF55068 5 150 2.35E-32 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS12005 6524799df5a776660d43c75cdea3f424 193 SUPERFAMILY SSF88946 12 107 2.39E-13 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS12005 6524799df5a776660d43c75cdea3f424 193 Gene3D G3DSA:1.10.10.10 129 187 7.6E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS12005 6524799df5a776660d43c75cdea3f424 193 Pfam PF04542 Sigma-70 region 2 28 93 3.8E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS12005 6524799df5a776660d43c75cdea3f424 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 183 5.4E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS12005 6524799df5a776660d43c75cdea3f424 193 SUPERFAMILY SSF88659 120 184 6.92E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS12005 6524799df5a776660d43c75cdea3f424 193 Gene3D G3DSA:1.10.1740.10 19 95 4.9E-13 T 11-11-2016 S40542_RS12005 6524799df5a776660d43c75cdea3f424 193 Pfam PF08281 Sigma-70, region 4 135 182 1.7E-8 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 Pfam PF00270 DEAD/DEAH box helicase 49 127 2.8E-4 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 Pfam PF06733 DEAD_2 145 264 1.6E-5 T 11-11-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 SMART SM00491 538 670 2.6E-31 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 Pfam PF13307 Helicase C-terminal domain 528 683 1.4E-32 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 SUPERFAMILY SSF52540 47 99 1.5E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 SUPERFAMILY SSF52540 198 274 1.5E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 SUPERFAMILY SSF52540 450 464 1.5E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 SUPERFAMILY SSF52540 495 663 1.5E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 Gene3D G3DSA:3.40.50.300 14 132 1.9E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 Gene3D G3DSA:3.40.50.300 452 462 1.9E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 Gene3D G3DSA:3.40.50.300 213 277 1.9E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16085 9e091fb310766d94dd0b382baaa1fc2a 689 Gene3D G3DSA:3.40.50.300 511 665 1.7E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19050 053bfbe5014623164e0892d42bff91ff 92 PRINTS PR00107 Phosphocarrier protein signature 16 32 1.9E-8 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like S40542_RS19050 053bfbe5014623164e0892d42bff91ff 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 1.9E-8 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like S40542_RS19050 053bfbe5014623164e0892d42bff91ff 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 1.9E-8 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like S40542_RS19050 053bfbe5014623164e0892d42bff91ff 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 16 23 - T 11-11-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site S40542_RS19050 053bfbe5014623164e0892d42bff91ff 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 9 85 5.4E-20 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like S40542_RS19050 053bfbe5014623164e0892d42bff91ff 92 Gene3D G3DSA:3.30.1340.10 9 90 3.2E-24 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like S40542_RS19050 053bfbe5014623164e0892d42bff91ff 92 Pfam PF00381 PTS HPr component phosphorylation site 10 85 4.6E-20 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like S40542_RS19050 053bfbe5014623164e0892d42bff91ff 92 SUPERFAMILY SSF55594 9 91 1.24E-22 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like S40542_RS11450 ea40ddd9a5d7bae527b16929ca4de211 171 SUPERFAMILY SSF52833 3 159 1.28E-46 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS11450 ea40ddd9a5d7bae527b16929ca4de211 171 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 11-11-2016 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 S40542_RS11450 ea40ddd9a5d7bae527b16929ca4de211 171 Gene3D G3DSA:3.40.30.10 3 160 5.7E-57 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS11450 ea40ddd9a5d7bae527b16929ca4de211 171 PIRSF PIRSF000303 1 163 3.0E-56 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS11450 ea40ddd9a5d7bae527b16929ca4de211 171 Pfam PF00255 Glutathione peroxidase 4 111 2.0E-35 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS11450 ea40ddd9a5d7bae527b16929ca4de211 171 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.4E-14 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS11450 ea40ddd9a5d7bae527b16929ca4de211 171 PRINTS PR01011 Glutathione peroxidase family signature 123 132 2.4E-14 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS11450 ea40ddd9a5d7bae527b16929ca4de211 171 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.4E-14 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS04440 48ace9bc4e8f00adf23b9a54ea036c54 94 Pfam PF04977 Septum formation initiator 11 88 1.4E-21 T 11-11-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 S40542_RS04440 48ace9bc4e8f00adf23b9a54ea036c54 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 31.31 T 11-11-2016 IPR023081 Cell division protein FtsB S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 2.0E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.0E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.0E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 2.0E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 SUPERFAMILY SSF52943 2 286 1.28E-93 T 11-11-2016 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 Pfam PF00231 ATP synthase 5 285 1.2E-89 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 Gene3D G3DSA:3.40.1380.10 64 191 1.1E-42 T 11-11-2016 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 Gene3D G3DSA:1.10.287.80 19 60 4.8E-38 T 11-11-2016 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 Gene3D G3DSA:1.10.287.80 201 234 4.8E-38 T 11-11-2016 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.579 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 Gene3D G3DSA:1.10.287.80 235 281 4.0E-30 T 11-11-2016 S40542_RS20700 9b79b01bc4718035b4b25185357db374 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 9.4E-107 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 PIRSF PIRSF002401 1 375 8.2E-141 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 Gene3D G3DSA:2.70.210.12 2 155 2.2E-59 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 SUPERFAMILY SSF52540 152 335 6.6E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 Pfam PF01018 GTP1/OBG 3 157 2.8E-59 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.9E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 Gene3D G3DSA:3.40.50.300 156 336 1.1E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 SUPERFAMILY SSF82051 2 157 4.19E-55 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-11-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.8E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.8E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.8E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.8E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 Hamap MF_01454 GTPase Obg [obg]. 2 332 47.912 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 S40542_RS03305 7600b4894481ff5d3536a6638ee3de2d 381 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 329 3.7E-146 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 Pfam PF03572 Peptidase family S41 178 344 5.7E-51 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 SUPERFAMILY SSF52096 172 348 3.48E-70 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 SUPERFAMILY SSF52096 26 100 3.48E-70 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 Gene3D G3DSA:3.90.226.10 163 355 1.5E-60 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 83 149 1.6E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 45 351 6.2E-88 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 SUPERFAMILY SSF50156 79 164 3.46E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 Gene3D G3DSA:3.30.750.44 49 87 4.7E-5 T 11-11-2016 S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 Gene3D G3DSA:2.30.42.10 88 162 6.1E-19 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 SMART SM00228 82 153 9.7E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS03665 542b21a8692fbf90febffac4e695f15f 391 SMART SM00245 153 346 6.9E-62 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 SUPERFAMILY SSF52317 1 191 3.54E-51 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.3E-6 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.3E-6 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 3.1E-76 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 Pfam PF00117 Glutamine amidotransferase class-I 4 190 2.5E-50 T 11-11-2016 IPR017926 Glutamine amidotransferase S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.8E-14 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.8E-14 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 6.8E-14 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 Gene3D G3DSA:3.40.50.880 2 191 7.1E-62 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.4E-34 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.4E-34 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.4E-34 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.4E-34 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.4E-34 T 11-11-2016 S40542_RS01560 aeb347fd8cfa8b1322cb2af380f97d43 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.4E-34 T 11-11-2016 S40542_RS09695 84af0dd8de88ec73c6957e56c4e58d48 213 SUPERFAMILY SSF63380 99 205 4.93E-29 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS09695 84af0dd8de88ec73c6957e56c4e58d48 213 Gene3D G3DSA:2.40.30.20 109 190 1.1E-24 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 S40542_RS09695 84af0dd8de88ec73c6957e56c4e58d48 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 206 1.6E-58 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS09695 84af0dd8de88ec73c6957e56c4e58d48 213 PIRSF PIRSF000498 1 211 1.4E-62 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS09695 84af0dd8de88ec73c6957e56c4e58d48 213 Gene3D G3DSA:2.40.30.20 5 108 5.9E-26 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 S40542_RS09695 84af0dd8de88ec73c6957e56c4e58d48 213 Pfam PF00677 Lumazine binding domain 3 92 5.4E-18 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS09695 84af0dd8de88ec73c6957e56c4e58d48 213 Pfam PF00677 Lumazine binding domain 106 190 3.9E-18 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS09695 84af0dd8de88ec73c6957e56c4e58d48 213 SUPERFAMILY SSF63380 1 94 1.02E-21 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Gene3D G3DSA:3.40.50.300 550 777 7.3E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Gene3D G3DSA:1.10.1780.10 1 148 1.2E-41 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 SUPERFAMILY SSF52540 546 853 4.15E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Gene3D G3DSA:1.10.8.60 778 856 1.0E-29 T 11-11-2016 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 8.0E-43 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 8.0E-43 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 8.0E-43 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 8.0E-43 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 1.7E-57 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 SMART SM00382 198 344 9.3E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 SMART SM00382 597 741 6.1E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 840 1.9E-24 T 11-11-2016 IPR019489 Clp ATPase, C-terminal S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 SUPERFAMILY SSF81923 4 156 7.85E-40 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 3.5E-14 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 SUPERFAMILY SSF52540 158 545 1.19E-99 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.6E-11 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.7E-7 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Gene3D G3DSA:1.10.8.60 343 427 1.1E-36 T 11-11-2016 S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 SMART SM01086 766 855 7.0E-30 T 11-11-2016 IPR019489 Clp ATPase, C-terminal S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 Gene3D G3DSA:3.40.50.300 160 342 1.1E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15870 f5246ae3abad1128ad7fd849c7ef0067 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 11-11-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 S40542_RS21040 e4af84d97b2da2bf00b65537532364b2 162 SUPERFAMILY SSF56935 22 148 8.33E-9 T 11-11-2016 S40542_RS21040 e4af84d97b2da2bf00b65537532364b2 162 Gene3D G3DSA:2.40.170.20 25 154 3.1E-6 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10745 e33dff7ec1c74c531fce01b5d51b41fd 144 Gene3D G3DSA:2.40.70.10 3 134 7.9E-41 T 11-11-2016 IPR021109 Aspartic peptidase domain S40542_RS10745 e33dff7ec1c74c531fce01b5d51b41fd 144 Pfam PF05618 Putative ATP-dependant zinc protease 6 141 1.8E-28 T 11-11-2016 S40542_RS10745 e33dff7ec1c74c531fce01b5d51b41fd 144 SUPERFAMILY SSF50630 6 140 2.67E-41 T 11-11-2016 IPR021109 Aspartic peptidase domain S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 Gene3D G3DSA:3.40.50.2300 3 120 2.5E-32 T 11-11-2016 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 SUPERFAMILY SSF46894 135 205 1.43E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 SUPERFAMILY SSF52172 3 135 4.84E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 SMART SM00448 2 116 9.5E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 6.4E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 Pfam PF00072 Response regulator receiver domain 5 117 4.8E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 SMART SM00421 142 199 2.2E-17 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 5.9E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 5.9E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 5.9E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS02815 c6eb670c7f0c2f7491997c54745c978e 205 Gene3D G3DSA:1.10.10.10 121 205 1.1E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09250 d0df49cd099ef53c57d958ada4472177 633 Gene3D G3DSA:3.40.47.10 117 384 1.6E-24 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS09250 d0df49cd099ef53c57d958ada4472177 633 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 154 370 1.0E-12 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS09250 d0df49cd099ef53c57d958ada4472177 633 SUPERFAMILY SSF53901 115 380 7.52E-28 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS09250 d0df49cd099ef53c57d958ada4472177 633 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 382 497 3.9E-5 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS09250 d0df49cd099ef53c57d958ada4472177 633 Gene3D G3DSA:3.40.47.10 389 541 1.2E-15 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS09250 d0df49cd099ef53c57d958ada4472177 633 SMART SM00825 Beta-ketoacyl synthase 164 548 0.0055 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS09250 d0df49cd099ef53c57d958ada4472177 633 SUPERFAMILY SSF53901 343 542 1.15E-26 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 11-11-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 Gene3D G3DSA:1.10.1040.10 618 696 7.2E-18 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 4 699 0.0 T 11-11-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 490 583 2.1E-27 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 Gene3D G3DSA:3.40.50.720 296 491 4.7E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 487 512 - T 11-11-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 SUPERFAMILY SSF48179 609 699 6.97E-22 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 Gene3D G3DSA:1.10.1040.10 492 584 1.3E-27 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 309 487 1.1E-55 T 11-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 SUPERFAMILY SSF48179 490 607 5.19E-30 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 SUPERFAMILY SSF51735 305 487 1.31E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 200 1.1E-40 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 SUPERFAMILY SSF52096 2 299 2.11E-67 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS08825 d7616a2d8cd368ef64f38a09a307085b 700 Gene3D G3DSA:3.90.226.10 4 200 8.7E-63 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS11685 8cece943093752e26abfb0c162aafafb 109 PIRSF PIRSF006223 2 109 5.0E-46 T 11-11-2016 IPR007453 Sulphur transfer protein DsrC/TusE S40542_RS11685 8cece943093752e26abfb0c162aafafb 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 2.2E-51 T 11-11-2016 IPR007453 Sulphur transfer protein DsrC/TusE S40542_RS11685 8cece943093752e26abfb0c162aafafb 109 Gene3D G3DSA:1.10.10.370 40 109 4.9E-38 T 11-11-2016 S40542_RS11685 8cece943093752e26abfb0c162aafafb 109 Gene3D G3DSA:3.30.1420.10 1 39 3.1E-13 T 11-11-2016 S40542_RS11685 8cece943093752e26abfb0c162aafafb 109 SUPERFAMILY SSF69721 1 109 9.16E-42 T 11-11-2016 IPR025526 DsrC-like domain S40542_RS11685 8cece943093752e26abfb0c162aafafb 109 Pfam PF04358 DsrC like protein 3 109 5.8E-47 T 11-11-2016 IPR007453 Sulphur transfer protein DsrC/TusE S40542_RS18460 0b43f0cb0aaad82cf6073e1431b03584 655 SUPERFAMILY SSF51735 143 271 2.32E-17 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18460 0b43f0cb0aaad82cf6073e1431b03584 655 Gene3D G3DSA:3.40.50.720 283 472 1.9E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18460 0b43f0cb0aaad82cf6073e1431b03584 655 Pfam PF02719 Polysaccharide biosynthesis protein 284 581 2.1E-127 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain S40542_RS18460 0b43f0cb0aaad82cf6073e1431b03584 655 SUPERFAMILY SSF51735 280 560 4.26E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18460 0b43f0cb0aaad82cf6073e1431b03584 655 Gene3D G3DSA:3.40.50.720 138 227 1.4E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18460 0b43f0cb0aaad82cf6073e1431b03584 655 Pfam PF13727 CoA-binding domain 70 239 2.2E-15 T 11-11-2016 S40542_RS18460 0b43f0cb0aaad82cf6073e1431b03584 655 Gene3D G3DSA:3.90.25.10 473 539 3.5E-6 T 11-11-2016 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 SMART SM00729 46 258 2.2E-36 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 Gene3D G3DSA:3.20.20.70 8 316 1.3E-103 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 SUPERFAMILY SSF102114 8 316 3.01E-91 T 11-11-2016 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 223 313 4.4E-20 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 TIGRFAM TIGR00433 bioB: biotin synthase 17 314 1.3E-125 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 Hamap MF_01694 Biotin synthase [bioB]. 8 316 41.42 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 SMART SM00876 223 315 3.9E-47 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 PIRSF PIRSF001619 2 322 3.1E-135 T 11-11-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 S40542_RS09625 46d0def12934dcdae57a92c8b934cd8f 347 Pfam PF04055 Radical SAM superfamily 53 200 3.6E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS18570 066baa46e27580cc1d945728bbf44665 318 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 124 3.7E-22 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 S40542_RS18570 066baa46e27580cc1d945728bbf44665 318 SUPERFAMILY SSF55347 133 277 1.9E-7 T 11-11-2016 S40542_RS18570 066baa46e27580cc1d945728bbf44665 318 SUPERFAMILY SSF51735 3 174 1.27E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18570 066baa46e27580cc1d945728bbf44665 318 Gene3D G3DSA:3.40.50.720 2 201 7.6E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18570 066baa46e27580cc1d945728bbf44665 318 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 151 230 2.1E-13 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 S40542_RS21400 c38e65adc173f015c9b22be73c0403f6 91 SUPERFAMILY SSF53474 21 89 8.27E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS21400 c38e65adc173f015c9b22be73c0403f6 91 Gene3D G3DSA:3.40.50.1820 28 89 5.9E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS19285 694c38c07f32212ce6374200649d9604 737 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 387 407 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 S40542_RS19285 694c38c07f32212ce6374200649d9604 737 SUPERFAMILY SSF102114 480 611 2.49E-11 T 11-11-2016 S40542_RS19285 694c38c07f32212ce6374200649d9604 737 SUPERFAMILY SSF102114 376 450 2.49E-11 T 11-11-2016 S40542_RS19285 694c38c07f32212ce6374200649d9604 737 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 31 651 1.3E-263 T 11-11-2016 IPR022946 Uncharacterised protein family UPF0313 S40542_RS19285 694c38c07f32212ce6374200649d9604 737 Pfam PF11842 Domain of unknown function (DUF3362) 601 727 7.0E-42 T 11-11-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal S40542_RS19285 694c38c07f32212ce6374200649d9604 737 SMART SM00729 383 634 9.2E-7 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 S40542_RS19285 694c38c07f32212ce6374200649d9604 737 Pfam PF08497 Radical SAM N-terminal 31 386 1.1E-143 T 11-11-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal S40542_RS19285 694c38c07f32212ce6374200649d9604 737 Gene3D G3DSA:3.80.30.20 381 648 3.1E-48 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe S40542_RS19285 694c38c07f32212ce6374200649d9604 737 Pfam PF04055 Radical SAM superfamily 387 592 3.5E-21 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS19285 694c38c07f32212ce6374200649d9604 737 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 30 731 48.334 T 11-11-2016 IPR022946 Uncharacterised protein family UPF0313 S40542_RS08815 d0be287a1de47d04cb40a37938fc1c9a 318 Gene3D G3DSA:1.10.8.300 200 314 3.1E-41 T 11-11-2016 S40542_RS08815 d0be287a1de47d04cb40a37938fc1c9a 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 5.5E-64 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 S40542_RS08815 d0be287a1de47d04cb40a37938fc1c9a 318 PIRSF PIRSF002849 1 318 4.2E-128 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted S40542_RS08815 d0be287a1de47d04cb40a37938fc1c9a 318 SUPERFAMILY SSF52540 5 290 2.62E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08815 d0be287a1de47d04cb40a37938fc1c9a 318 Gene3D G3DSA:3.40.50.300 18 182 2.6E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 SUPERFAMILY SSF82714 183 263 5.62E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 Gene3D G3DSA:1.10.3850.10 799 1014 1.0E-54 T 11-11-2016 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 SUPERFAMILY SSF82714 708 793 5.36E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 Gene3D G3DSA:1.20.1640.10 285 493 6.7E-44 T 11-11-2016 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 SUPERFAMILY SSF82866 304 489 6.41E-37 T 11-11-2016 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 SUPERFAMILY SSF82866 791 1016 9.55E-45 T 11-11-2016 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 SUPERFAMILY SSF82693 134 180 5.23E-12 T 11-11-2016 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 SUPERFAMILY SSF82693 268 319 5.23E-12 T 11-11-2016 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 Gene3D G3DSA:3.30.70.1430 42 139 1.3E-23 T 11-11-2016 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 Pfam PF00873 AcrB/AcrD/AcrF family 4 1012 8.7E-162 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 SUPERFAMILY SSF82693 42 133 2.82E-19 T 11-11-2016 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 Gene3D G3DSA:3.30.2090.10 184 263 3.1E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 Gene3D G3DSA:3.30.2090.10 707 792 2.5E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.8E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.8E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.8E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.8E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.8E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 PRINTS PR00702 Acriflavin resistance protein family signature 533 550 5.8E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS19450 fbec9e21a2a088d74e8c13a246a16c07 1019 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.8E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.9E-69 T 11-11-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 Gene3D G3DSA:3.40.50.720 140 264 8.9E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 SUPERFAMILY SSF53223 1 122 4.12E-40 T 11-11-2016 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 SUPERFAMILY SSF51735 123 282 6.73E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 Gene3D G3DSA:3.40.192.10 7 139 9.1E-52 T 11-11-2016 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.7E-39 T 11-11-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.8E-85 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.444 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS16925 f3e977a8b42c804ddb5810897303cb89 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 S40542_RS18970 00aca00351fae55a8ab589ce0459059a 85 PIRSF PIRSF003113 1 84 1.9E-21 T 11-11-2016 IPR002634 BolA protein S40542_RS18970 00aca00351fae55a8ab589ce0459059a 85 SUPERFAMILY SSF82657 1 81 5.89E-26 T 11-11-2016 IPR002634 BolA protein S40542_RS18970 00aca00351fae55a8ab589ce0459059a 85 Pfam PF01722 BolA-like protein 22 74 1.6E-12 T 11-11-2016 IPR002634 BolA protein S40542_RS18970 00aca00351fae55a8ab589ce0459059a 85 Gene3D G3DSA:3.30.300.90 1 80 1.2E-25 T 11-11-2016 IPR002634 BolA protein S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 Gene3D G3DSA:3.30.1330.30 3 76 1.1E-23 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 Pfam PF00588 SpoU rRNA Methylase family 97 237 2.6E-40 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 3.3E-83 T 11-11-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 SUPERFAMILY SSF75217 69 243 1.64E-49 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 SUPERFAMILY SSF55315 3 77 4.47E-18 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 Gene3D G3DSA:3.40.1280.10 93 243 8.1E-55 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 SMART SM00967 5 81 1.5E-18 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.326 T 11-11-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB S40542_RS19370 d482e87963d4c9f5bf8056a867645fb0 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 3.4E-19 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 S40542_RS10795 c8cafe7ad85ede44a97bead5c173d8ff 439 Pfam PF01266 FAD dependent oxidoreductase 8 393 1.2E-18 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 S40542_RS10795 c8cafe7ad85ede44a97bead5c173d8ff 439 SUPERFAMILY SSF51905 5 239 1.17E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10795 c8cafe7ad85ede44a97bead5c173d8ff 439 Gene3D G3DSA:3.50.50.60 4 61 1.2E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10795 c8cafe7ad85ede44a97bead5c173d8ff 439 Gene3D G3DSA:3.50.50.60 358 399 1.2E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10795 c8cafe7ad85ede44a97bead5c173d8ff 439 Gene3D G3DSA:3.50.50.60 156 226 1.2E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10795 c8cafe7ad85ede44a97bead5c173d8ff 439 Gene3D G3DSA:3.30.9.10 63 154 1.3E-21 T 11-11-2016 S40542_RS10795 c8cafe7ad85ede44a97bead5c173d8ff 439 Gene3D G3DSA:3.30.9.10 232 346 1.3E-21 T 11-11-2016 S40542_RS10795 c8cafe7ad85ede44a97bead5c173d8ff 439 SUPERFAMILY SSF54373 255 344 5.1E-7 T 11-11-2016 S40542_RS16295 f570eec2afd6a0037f5b17df20f97f4a 231 Gene3D G3DSA:3.90.1680.10 1 213 3.1E-29 T 11-11-2016 IPR003738 SOS response associated peptidase (SRAP) S40542_RS16295 f570eec2afd6a0037f5b17df20f97f4a 231 SUPERFAMILY SSF143081 2 214 1.44E-33 T 11-11-2016 IPR003738 SOS response associated peptidase (SRAP) S40542_RS16295 f570eec2afd6a0037f5b17df20f97f4a 231 Pfam PF02586 SOS response associated peptidase (SRAP) 1 213 1.1E-25 T 11-11-2016 IPR003738 SOS response associated peptidase (SRAP) S40542_RS04945 99420d09cecfcebb8b0fab0491f2ce04 81 Pfam PF01381 Helix-turn-helix 18 70 6.8E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS04945 99420d09cecfcebb8b0fab0491f2ce04 81 SUPERFAMILY SSF47413 13 74 1.38E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS04945 99420d09cecfcebb8b0fab0491f2ce04 81 Gene3D G3DSA:1.10.260.40 2 74 5.9E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS04945 99420d09cecfcebb8b0fab0491f2ce04 81 SMART SM00530 17 72 2.1E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS20160 18146149309bc60c0202173833b3687f 507 SUPERFAMILY SSF103473 13 214 4.05E-31 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS20160 18146149309bc60c0202173833b3687f 507 SUPERFAMILY SSF103473 287 495 4.05E-31 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS20160 18146149309bc60c0202173833b3687f 507 Pfam PF00854 POT family 98 462 3.5E-63 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 S40542_RS20160 18146149309bc60c0202173833b3687f 507 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 86 110 - T 11-11-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 S40542_RS20160 18146149309bc60c0202173833b3687f 507 Gene3D G3DSA:1.20.1250.20 40 204 3.3E-16 T 11-11-2016 S40542_RS20160 18146149309bc60c0202173833b3687f 507 Gene3D G3DSA:1.20.1250.20 292 492 5.9E-9 T 11-11-2016 S40542_RS20160 18146149309bc60c0202173833b3687f 507 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 19 492 8.0E-120 T 11-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 Gene3D G3DSA:3.30.2090.10 719 804 1.8E-23 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 6.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82866 299 500 3.27E-51 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1044 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82866 828 1023 1.7E-43 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 Gene3D G3DSA:3.30.70.1430 39 139 6.3E-34 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 Pfam PF00873 AcrB/AcrD/AcrF family 2 1022 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 Gene3D G3DSA:3.30.70.1430 567 666 1.8E-25 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82693 39 133 4.71E-28 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 Gene3D G3DSA:3.30.2090.10 183 278 1.1E-25 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82693 277 333 1.44E-23 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82693 137 183 1.44E-23 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82714 719 804 1.01E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 Gene3D G3DSA:1.10.3850.10 811 1025 7.3E-56 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 Gene3D G3DSA:1.10.3850.10 285 501 4.4E-61 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82693 565 668 4.71E-25 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82693 669 718 2.88E-26 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82693 805 854 2.88E-26 T 11-11-2016 S40542_RS11405 cdef19993c3a8f6d6dcfaa500368b469 1057 SUPERFAMILY SSF82714 184 274 1.14E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS18940 dd22beca9b7d7330e7e3518cf2f69a8c 142 Gene3D G3DSA:3.90.1180.10 3 141 1.1E-66 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 S40542_RS18940 dd22beca9b7d7330e7e3518cf2f69a8c 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.9E-67 T 11-11-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18940 dd22beca9b7d7330e7e3518cf2f69a8c 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-11-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 S40542_RS18940 dd22beca9b7d7330e7e3518cf2f69a8c 142 Pfam PF00572 Ribosomal protein L13 15 138 3.9E-59 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 S40542_RS18940 dd22beca9b7d7330e7e3518cf2f69a8c 142 SUPERFAMILY SSF52161 1 140 1.44E-61 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 S40542_RS18940 dd22beca9b7d7330e7e3518cf2f69a8c 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.459 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 S40542_RS18940 dd22beca9b7d7330e7e3518cf2f69a8c 142 PIRSF PIRSF002181 1 142 3.3E-52 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 S40542_RS17785 1b5dbf0f852f523b9307782adb5ce183 349 Pfam PF02562 PhoH-like protein 118 321 9.1E-95 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 S40542_RS17785 1b5dbf0f852f523b9307782adb5ce183 349 SUPERFAMILY SSF54791 15 75 7.6E-5 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 S40542_RS17785 1b5dbf0f852f523b9307782adb5ce183 349 Gene3D G3DSA:3.40.50.300 118 321 3.0E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17785 1b5dbf0f852f523b9307782adb5ce183 349 SUPERFAMILY SSF52540 117 293 1.99E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 Gene3D G3DSA:3.40.50.1000 481 521 2.5E-39 T 11-11-2016 IPR023214 HAD-like domain S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 Gene3D G3DSA:3.40.50.1000 605 752 2.5E-39 T 11-11-2016 IPR023214 HAD-like domain S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 280 764 5.4E-67 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 SUPERFAMILY SSF81665 281 311 8.89E-11 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 SUPERFAMILY SSF81665 408 498 8.89E-11 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 87 2.0E-23 T 11-11-2016 IPR021993 Putative metal-binding domain of cation transport ATPase S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 SUPERFAMILY SSF56784 557 785 1.7E-44 T 11-11-2016 IPR023214 HAD-like domain S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 SUPERFAMILY SSF56784 505 523 1.7E-44 T 11-11-2016 IPR023214 HAD-like domain S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 Gene3D G3DSA:2.70.150.10 272 406 3.5E-28 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 507 513 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 698 4.0E-27 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 Gene3D G3DSA:3.30.70.100 89 160 3.2E-17 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 789 6.4E-120 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 229 787 2.5E-143 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 246 787 4.4E-155 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 SUPERFAMILY SSF55008 87 162 4.58E-18 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 SUPERFAMILY SSF81653 310 405 1.05E-25 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 Pfam PF00403 Heavy-metal-associated domain 95 155 4.2E-9 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00943 Copper-transporting ATPase signature 662 679 3.6E-5 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00943 Copper-transporting ATPase signature 488 503 3.6E-5 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00943 Copper-transporting ATPase signature 136 156 3.6E-5 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00943 Copper-transporting ATPase signature 231 250 3.6E-5 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00943 Copper-transporting ATPase signature 297 315 3.6E-5 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 Pfam PF00122 E1-E2 ATPase 279 496 1.2E-58 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 642 1.7E-20 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 357 371 1.7E-20 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 685 704 1.7E-20 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 720 1.7E-20 T 11-11-2016 S40542_RS09185 39ed663a4b1551047e4ee2983f194627 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 519 1.7E-20 T 11-11-2016 S40542_RS05805 1f0e38ce915030294bd6cf847d27d2b8 155 SUPERFAMILY SSF53254 1 143 4.06E-20 T 11-11-2016 IPR029033 Histidine phosphatase superfamily S40542_RS05805 1f0e38ce915030294bd6cf847d27d2b8 155 Gene3D G3DSA:3.40.50.1240 2 141 1.5E-32 T 11-11-2016 IPR029033 Histidine phosphatase superfamily S40542_RS05805 1f0e38ce915030294bd6cf847d27d2b8 155 SMART SM00855 3 116 4.0E-4 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 S40542_RS05805 1f0e38ce915030294bd6cf847d27d2b8 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 4 137 2.2E-27 T 11-11-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 S40542_RS05805 1f0e38ce915030294bd6cf847d27d2b8 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 67 1.5E-8 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 S40542_RS18680 c4cb00482bea6d08a19e2cfd977ece06 433 Pfam PF07690 Major Facilitator Superfamily 25 392 3.1E-15 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS18680 c4cb00482bea6d08a19e2cfd977ece06 433 Gene3D G3DSA:1.20.1250.20 15 215 9.0E-17 T 11-11-2016 S40542_RS18680 c4cb00482bea6d08a19e2cfd977ece06 433 SUPERFAMILY SSF103473 7 424 3.01E-32 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS18680 c4cb00482bea6d08a19e2cfd977ece06 433 Gene3D G3DSA:1.20.1250.20 229 408 6.0E-4 T 11-11-2016 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 677 688 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 SUPERFAMILY SSF55103 274 554 1.06E-44 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 Pfam PF13183 4Fe-4S dicluster domain 588 691 7.0E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 SUPERFAMILY SSF56176 28 204 6.91E-47 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 SUPERFAMILY SSF56176 252 293 6.91E-47 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 SUPERFAMILY SSF46548 585 695 2.51E-8 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 296 551 4.0E-51 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 Gene3D G3DSA:3.30.43.10 25 120 1.5E-21 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 Gene3D G3DSA:1.10.1060.10 529 700 2.2E-14 T 11-11-2016 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 Pfam PF01565 FAD binding domain 64 200 4.6E-32 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 S40542_RS13675 35498b83f5341d1bc4b4c3a62a53aabb 1012 Gene3D G3DSA:3.30.465.10 121 293 9.5E-36 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 S40542_RS01580 9e512ef8eedf4ade8c29a0f2a72f41f4 490 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 7 488 4.0E-249 T 11-11-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 S40542_RS01580 9e512ef8eedf4ade8c29a0f2a72f41f4 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 S40542_RS01580 9e512ef8eedf4ade8c29a0f2a72f41f4 490 Gene3D G3DSA:3.40.309.10 261 446 2.7E-41 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 S40542_RS01580 9e512ef8eedf4ade8c29a0f2a72f41f4 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 S40542_RS01580 9e512ef8eedf4ade8c29a0f2a72f41f4 490 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 5 489 57.79 T 11-11-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 S40542_RS01580 9e512ef8eedf4ade8c29a0f2a72f41f4 490 SUPERFAMILY SSF53720 3 458 7.46E-124 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 S40542_RS01580 9e512ef8eedf4ade8c29a0f2a72f41f4 490 Pfam PF00171 Aldehyde dehydrogenase family 13 463 2.1E-119 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 S40542_RS01580 9e512ef8eedf4ade8c29a0f2a72f41f4 490 Gene3D G3DSA:3.40.605.10 6 260 6.0E-74 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 S40542_RS05725 5e0a0266fd3ba3ee4bea2512f502acc3 129 Pfam PF04379 Protein of unknown function (DUF525) 22 106 7.1E-34 T 11-11-2016 IPR007474 ApaG domain S40542_RS05725 5e0a0266fd3ba3ee4bea2512f502acc3 129 SUPERFAMILY SSF110069 8 129 2.35E-47 T 11-11-2016 IPR007474 ApaG domain S40542_RS05725 5e0a0266fd3ba3ee4bea2512f502acc3 129 Hamap MF_00791 Protein ApaG [apaG]. 4 129 31.77 T 11-11-2016 IPR023065 Uncharacterised protein family ApaG S40542_RS05725 5e0a0266fd3ba3ee4bea2512f502acc3 129 Gene3D G3DSA:2.60.40.1470 7 129 3.2E-46 T 11-11-2016 IPR007474 ApaG domain S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 SUPERFAMILY SSF55031 184 293 1.64E-20 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 Pfam PF01546 Peptidase family M20/M25/M40 79 382 1.4E-30 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 386 57.9 T 11-11-2016 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 380 1.5E-126 T 11-11-2016 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 SUPERFAMILY SSF53187 308 384 1.94E-54 T 11-11-2016 S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 SUPERFAMILY SSF53187 4 183 1.94E-54 T 11-11-2016 S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 113 150 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 78 87 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 Gene3D G3DSA:3.30.70.360 193 293 8.6E-25 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 Pfam PF07687 Peptidase dimerisation domain 181 290 2.7E-23 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 Gene3D G3DSA:3.40.630.10 326 385 3.8E-61 T 11-11-2016 S40542_RS18375 95c5d19e1c7d24b44a740a0c51bcacfb 392 Gene3D G3DSA:3.40.630.10 4 192 3.8E-61 T 11-11-2016 S40542_RS15885 a96b13abdc127669b3446847a9fc8619 252 SUPERFAMILY SSF48452 37 121 9.87E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS15885 a96b13abdc127669b3446847a9fc8619 252 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 10 250 8.3E-77 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD S40542_RS15885 a96b13abdc127669b3446847a9fc8619 252 Pfam PF13525 Outer membrane lipoprotein 38 243 1.3E-66 T 11-11-2016 S40542_RS15885 a96b13abdc127669b3446847a9fc8619 252 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 251 34.226 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD S40542_RS15885 a96b13abdc127669b3446847a9fc8619 252 Gene3D G3DSA:1.25.40.10 37 217 1.3E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS04585 55754b6f2241f55ec4b70c7c96a5327f 244 Pfam PF04452 RNA methyltransferase 20 236 2.6E-75 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS04585 55754b6f2241f55ec4b70c7c96a5327f 244 Gene3D G3DSA:2.40.240.20 1 68 6.0E-25 T 11-11-2016 S40542_RS04585 55754b6f2241f55ec4b70c7c96a5327f 244 Gene3D G3DSA:3.40.1280.10 75 242 2.0E-60 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS04585 55754b6f2241f55ec4b70c7c96a5327f 244 SUPERFAMILY SSF88697 2 69 7.95E-18 T 11-11-2016 IPR015947 PUA-like domain S40542_RS04585 55754b6f2241f55ec4b70c7c96a5327f 244 SUPERFAMILY SSF75217 75 242 6.11E-53 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS04585 55754b6f2241f55ec4b70c7c96a5327f 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 5.9E-75 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS04585 55754b6f2241f55ec4b70c7c96a5327f 244 PIRSF PIRSF015601 3 242 7.5E-58 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 PIRSF PIRSF001369 38 428 6.2E-170 T 11-11-2016 IPR024176 Citrate synthase, bacterial-type S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 Gene3D G3DSA:1.10.230.10 281 373 6.1E-43 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 11-11-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 SUPERFAMILY SSF48256 4 428 2.09E-168 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 PRINTS PR00143 Citrate synthase signature 165 178 2.9E-56 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 PRINTS PR00143 Citrate synthase signature 296 316 2.9E-56 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 PRINTS PR00143 Citrate synthase signature 379 393 2.9E-56 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 PRINTS PR00143 Citrate synthase signature 219 234 2.9E-56 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 PRINTS PR00143 Citrate synthase signature 359 375 2.9E-56 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 PRINTS PR00143 Citrate synthase signature 241 269 2.9E-56 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 3.8E-231 T 11-11-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 2.2E-137 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 S40542_RS12070 6a5746c1c632ffdc17dc443ed1112803 428 Gene3D G3DSA:1.10.580.10 52 280 5.4E-99 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 S40542_RS08890 a11639d258f8a77160c2f5f8eebb9b4b 322 Gene3D G3DSA:3.20.20.100 14 313 8.6E-64 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain S40542_RS08890 a11639d258f8a77160c2f5f8eebb9b4b 322 Pfam PF00248 Aldo/keto reductase family 16 308 9.3E-53 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain S40542_RS08890 a11639d258f8a77160c2f5f8eebb9b4b 322 SUPERFAMILY SSF51430 13 313 8.77E-63 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain S40542_RS04210 387ef2b9f41f4ae548f78dd8517d0d34 174 Gene3D G3DSA:1.20.1280.20 81 174 6.7E-28 T 11-11-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 S40542_RS04210 387ef2b9f41f4ae548f78dd8517d0d34 174 SUPERFAMILY SSF46565 2 73 3.14E-16 T 11-11-2016 IPR001623 DnaJ domain S40542_RS04210 387ef2b9f41f4ae548f78dd8517d0d34 174 SUPERFAMILY SSF47144 77 174 3.4E-23 T 11-11-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 S40542_RS04210 387ef2b9f41f4ae548f78dd8517d0d34 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 173 24.183 T 11-11-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 S40542_RS04210 387ef2b9f41f4ae548f78dd8517d0d34 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 165 6.8E-18 T 11-11-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 S40542_RS04210 387ef2b9f41f4ae548f78dd8517d0d34 174 SMART SM00271 1 66 1.5E-8 T 11-11-2016 IPR001623 DnaJ domain S40542_RS04210 387ef2b9f41f4ae548f78dd8517d0d34 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 172 9.6E-38 T 11-11-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 S40542_RS04210 387ef2b9f41f4ae548f78dd8517d0d34 174 Gene3D G3DSA:1.10.287.110 2 73 9.2E-24 T 11-11-2016 IPR001623 DnaJ domain S40542_RS16780 8ed915530e550ee89f1abf1b1139979a 259 SUPERFAMILY SSF101386 3 103 5.61E-23 T 11-11-2016 S40542_RS16780 8ed915530e550ee89f1abf1b1139979a 259 SUPERFAMILY SSF101386 136 228 2.99E-21 T 11-11-2016 S40542_RS16780 8ed915530e550ee89f1abf1b1139979a 259 Gene3D G3DSA:1.10.287.1080 135 217 5.9E-11 T 11-11-2016 S40542_RS16780 8ed915530e550ee89f1abf1b1139979a 259 Gene3D G3DSA:1.10.287.1080 5 72 1.3E-7 T 11-11-2016 S40542_RS16780 8ed915530e550ee89f1abf1b1139979a 259 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 166 224 6.0E-6 T 11-11-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core S40542_RS16780 8ed915530e550ee89f1abf1b1139979a 259 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 2.7E-22 T 11-11-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core S40542_RS16780 8ed915530e550ee89f1abf1b1139979a 259 TIGRFAM TIGR00444 mazG: MazG family protein 11 255 2.4E-82 T 11-11-2016 IPR011551 NTP pyrophosphohydrolase MazG S40542_RS11745 0b7542e085dd502c6f2b80fb2fac63fc 405 Gene3D G3DSA:3.40.50.970 20 385 2.0E-142 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS11745 0b7542e085dd502c6f2b80fb2fac63fc 405 Pfam PF00676 Dehydrogenase E1 component 56 363 8.6E-91 T 11-11-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 S40542_RS11745 0b7542e085dd502c6f2b80fb2fac63fc 405 SUPERFAMILY SSF52518 25 398 1.73E-105 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS06975 0cda4a4b019068ba3485c1663bba3afc 240 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 162 9.3E-10 T 11-11-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 6.4E-199 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 PIRSF PIRSF000447 1 412 3.0E-200 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 SUPERFAMILY SSF53901 4 252 5.21E-81 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 SUPERFAMILY SSF53901 214 411 4.19E-70 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.8E-36 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 Gene3D G3DSA:3.40.47.10 3 257 2.5E-80 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 Gene3D G3DSA:3.40.47.10 263 411 2.4E-60 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.7E-63 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS14405 c7ff4316c8e6f74aceefba9a0435a31e 412 SMART SM00825 Beta-ketoacyl synthase 6 412 1.1E-14 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 8.9E-39 T 11-11-2016 IPR013029 Domain of unknown function DUF933 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 SUPERFAMILY SSF81271 279 363 1.33E-35 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 Gene3D G3DSA:3.10.20.30 265 363 6.6E-48 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 Gene3D G3DSA:3.40.50.300 4 130 1.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 Gene3D G3DSA:3.40.50.300 201 264 1.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 Gene3D G3DSA:1.10.150.300 131 200 1.6E-25 T 11-11-2016 IPR023192 TGS-like domain S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 PIRSF PIRSF006641 1 363 1.8E-156 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.685 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 SUPERFAMILY SSF52540 3 301 1.41E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.6E-22 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.4E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.4E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.4E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS17705 d7a876ed9c92923e381963a91fd6c07b 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 9.5E-166 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 S40542_RS00665 ae249befe639596f5a8648c982842241 394 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 237 340 1.2E-24 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS00665 ae249befe639596f5a8648c982842241 394 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 91 229 1.5E-19 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS00665 ae249befe639596f5a8648c982842241 394 SUPERFAMILY SSF53901 7 228 6.34E-32 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00665 ae249befe639596f5a8648c982842241 394 SUPERFAMILY SSF53901 204 390 7.29E-41 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00665 ae249befe639596f5a8648c982842241 394 Gene3D G3DSA:3.40.47.10 243 391 5.1E-45 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00665 ae249befe639596f5a8648c982842241 394 SMART SM00825 Beta-ketoacyl synthase 9 392 2.4E-6 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS00665 ae249befe639596f5a8648c982842241 394 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 149 165 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site S40542_RS00665 ae249befe639596f5a8648c982842241 394 Gene3D G3DSA:3.40.47.10 72 229 2.4E-26 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 Pfam PF00106 short chain dehydrogenase 6 195 3.9E-42 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 SUPERFAMILY SSF51735 3 213 4.31E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 Gene3D G3DSA:3.40.50.720 3 200 6.9E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-13 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-13 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.2E-13 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.2E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.2E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10850 43298159c0c9e78daa8a5cc580cb67e9 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.2E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 Gene3D G3DSA:2.40.30.10 151 253 1.3E-29 T 11-11-2016 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 Pfam PF00042 Globin 7 102 3.7E-11 T 11-11-2016 IPR000971 Globin GO:0019825|GO:0020037 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 Pfam PF00175 Oxidoreductase NAD-binding domain 262 363 1.7E-14 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 Gene3D G3DSA:1.10.490.10 2 142 2.1E-51 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 SUPERFAMILY SSF46458 1 144 8.98E-40 T 11-11-2016 IPR009050 Globin-like S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 Pfam PF00970 Oxidoreductase FAD-binding domain 158 251 2.1E-8 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 SUPERFAMILY SSF63380 151 253 7.74E-23 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 SUPERFAMILY SSF52343 255 385 4.98E-33 T 11-11-2016 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 Gene3D G3DSA:3.40.50.80 257 385 2.6E-31 T 11-11-2016 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 4.9E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 PRINTS PR00410 Phenol hydroxylase reductase family signature 349 357 4.9E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS08200 afb4de0a92a89b2a4442fe45e2c12d3a 387 PRINTS PR00410 Phenol hydroxylase reductase family signature 261 280 4.9E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 PIRSF PIRSF000429 1 392 9.7E-114 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 Gene3D G3DSA:3.40.47.10 277 392 5.9E-59 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 Gene3D G3DSA:3.40.47.10 144 195 5.9E-59 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 SUPERFAMILY SSF53901 6 270 4.55E-78 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 1.3E-127 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.3E-43 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 SUPERFAMILY SSF53901 271 391 2.11E-40 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 Pfam PF00108 Thiolase, N-terminal domain 6 263 4.6E-86 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 11-11-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 Gene3D G3DSA:3.40.47.10 196 276 1.5E-67 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13865 e98799bbd37c1abb8628f1d860e0ed4b 392 Gene3D G3DSA:3.40.47.10 6 125 1.5E-67 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00810 3559d4b4b1e073dcdef6506708072407 292 SMART SM00563 83 225 8.1E-21 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS00810 3559d4b4b1e073dcdef6506708072407 292 Gene3D G3DSA:3.40.1130.10 72 193 7.1E-6 T 11-11-2016 S40542_RS00810 3559d4b4b1e073dcdef6506708072407 292 SUPERFAMILY SSF69593 15 230 5.62E-34 T 11-11-2016 S40542_RS00810 3559d4b4b1e073dcdef6506708072407 292 Pfam PF01553 Acyltransferase 69 217 4.9E-17 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS15040 e57db9009e34d733d623454391fcf7a8 244 SUPERFAMILY SSF53098 81 240 1.52E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS15040 e57db9009e34d733d623454391fcf7a8 244 Gene3D G3DSA:3.30.420.10 75 235 7.3E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS15040 e57db9009e34d733d623454391fcf7a8 244 Pfam PF00665 Integrase core domain 82 196 1.2E-18 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SUPERFAMILY SSF52540 788 996 8.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 Gene3D G3DSA:3.40.50.300 593 792 1.5E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 Pfam PF02559 CarD-like/TRCF domain 486 581 6.2E-23 T 11-11-2016 IPR003711 CarD-like/TRCF domain S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SMART SM00487 606 796 1.5E-35 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 Gene3D G3DSA:3.30.2060.10 132 207 1.7E-15 T 11-11-2016 S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 Pfam PF00270 DEAD/DEAH box helicase 611 771 1.2E-20 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SMART SM01058 485 582 2.4E-48 T 11-11-2016 IPR003711 CarD-like/TRCF domain S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 Pfam PF00271 Helicase conserved C-terminal domain 811 915 1.2E-17 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SMART SM00982 1014 1114 8.0E-46 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SUPERFAMILY SSF52540 9 344 8.67E-104 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SUPERFAMILY SSF143517 1001 1152 9.15E-42 T 11-11-2016 S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SUPERFAMILY SSF52540 529 789 9.34E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 Pfam PF03461 TRCF domain 1015 1106 4.2E-28 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 Gene3D G3DSA:3.40.50.300 799 969 1.3E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SUPERFAMILY SSF141259 477 554 3.01E-22 T 11-11-2016 IPR003711 CarD-like/TRCF domain S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SUPERFAMILY SSF52540 352 472 1.27E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 SMART SM00490 832 916 1.4E-16 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1088 0.0 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 S40542_RS11085 0c24ac2ef8c2262773c181f00237d057 1157 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1147 28.921 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 S40542_RS05625 6f7d6f7c57701818076e5934bba5f7c8 251 Pfam PF03330 Lytic transglycolase 74 164 8.1E-24 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain S40542_RS05625 6f7d6f7c57701818076e5934bba5f7c8 251 Gene3D G3DSA:3.30.70.1070 172 245 5.3E-6 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS05625 6f7d6f7c57701818076e5934bba5f7c8 251 SUPERFAMILY SSF110997 173 247 1.06E-10 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS05625 6f7d6f7c57701818076e5934bba5f7c8 251 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 77 235 1.0E-44 T 11-11-2016 IPR012997 Rare lipoprotein A S40542_RS05625 6f7d6f7c57701818076e5934bba5f7c8 251 Pfam PF05036 Sporulation related domain 178 242 7.1E-10 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS05625 6f7d6f7c57701818076e5934bba5f7c8 251 SUPERFAMILY SSF50685 70 162 2.2E-9 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain S40542_RS11750 fca9a236a9bc563c275113d15481b67d 343 PIRSF PIRSF017020 6 342 1.7E-132 T 11-11-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 S40542_RS11750 fca9a236a9bc563c275113d15481b67d 343 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 54 335 2.3E-53 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 S40542_RS11750 fca9a236a9bc563c275113d15481b67d 343 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 11 333 6.1E-110 T 11-11-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 S40542_RS11750 fca9a236a9bc563c275113d15481b67d 343 SUPERFAMILY SSF53187 11 335 9.82E-77 T 11-11-2016 S40542_RS11750 fca9a236a9bc563c275113d15481b67d 343 Gene3D G3DSA:3.40.630.10 43 247 1.2E-10 T 11-11-2016 S40542_RS11750 fca9a236a9bc563c275113d15481b67d 343 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 343 138.083 T 11-11-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 S40542_RS17580 695f6e3c4d88dfa29fd860555567fa7b 542 Gene3D G3DSA:3.30.43.10 76 133 4.6E-6 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 S40542_RS17580 695f6e3c4d88dfa29fd860555567fa7b 542 Pfam PF01565 FAD binding domain 80 202 3.9E-17 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 S40542_RS17580 695f6e3c4d88dfa29fd860555567fa7b 542 Pfam PF08031 Berberine and berberine like 497 541 9.5E-14 T 11-11-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 S40542_RS17580 695f6e3c4d88dfa29fd860555567fa7b 542 Gene3D G3DSA:3.30.465.10 134 246 1.0E-4 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 S40542_RS17580 695f6e3c4d88dfa29fd860555567fa7b 542 SUPERFAMILY SSF56176 59 252 1.64E-31 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 S40542_RS17580 695f6e3c4d88dfa29fd860555567fa7b 542 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 41 1.2E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal S40542_RS04240 1516600690f1119bc1310bb0fad43b78 457 Gene3D G3DSA:3.40.50.720 391 416 6.3E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04240 1516600690f1119bc1310bb0fad43b78 457 Gene3D G3DSA:3.40.50.720 54 219 6.3E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04240 1516600690f1119bc1310bb0fad43b78 457 SUPERFAMILY SSF51735 53 213 6.1E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04240 1516600690f1119bc1310bb0fad43b78 457 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 5.0E-6 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal S40542_RS04240 1516600690f1119bc1310bb0fad43b78 457 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 4 26 5.4E-9 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal S40542_RS04240 1516600690f1119bc1310bb0fad43b78 457 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 54 180 2.9E-19 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 S40542_RS05675 8ea5039bd891fac739a88d7fb9be00f8 804 Pfam PF13654 AAA domain 35 543 9.6E-158 T 11-11-2016 S40542_RS05675 8ea5039bd891fac739a88d7fb9be00f8 804 Gene3D G3DSA:3.30.230.10 562 759 9.8E-31 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS05675 8ea5039bd891fac739a88d7fb9be00f8 804 SUPERFAMILY SSF54211 568 761 4.55E-35 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS05675 8ea5039bd891fac739a88d7fb9be00f8 804 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 653 759 2.4E-9 T 11-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 S40542_RS05675 8ea5039bd891fac739a88d7fb9be00f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 710 728 1.2E-8 T 11-11-2016 S40542_RS05675 8ea5039bd891fac739a88d7fb9be00f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 680 699 1.2E-8 T 11-11-2016 S40542_RS05675 8ea5039bd891fac739a88d7fb9be00f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 650 669 1.2E-8 T 11-11-2016 S40542_RS05675 8ea5039bd891fac739a88d7fb9be00f8 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 569 585 1.2E-8 T 11-11-2016 S40542_RS04570 ab90b1bb073f7f6cb52f24b87a5332e3 151 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 16 145 6.6E-49 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 S40542_RS04570 ab90b1bb073f7f6cb52f24b87a5332e3 151 Pfam PF03652 Holliday junction resolvase 14 145 9.9E-39 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 S40542_RS04570 ab90b1bb073f7f6cb52f24b87a5332e3 151 Gene3D G3DSA:3.30.420.140 13 147 5.8E-42 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 S40542_RS04570 ab90b1bb073f7f6cb52f24b87a5332e3 151 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 13 148 23.533 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 S40542_RS04570 ab90b1bb073f7f6cb52f24b87a5332e3 151 SUPERFAMILY SSF53098 14 146 1.15E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS04570 ab90b1bb073f7f6cb52f24b87a5332e3 151 SMART SM00732 13 113 8.8E-33 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 S40542_RS05030 533a03a96946036177a8f29aeaf8055f 274 Gene3D G3DSA:3.40.50.300 5 232 1.9E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05030 533a03a96946036177a8f29aeaf8055f 274 Pfam PF00005 ABC transporter 21 170 1.8E-36 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS05030 533a03a96946036177a8f29aeaf8055f 274 SMART SM00382 30 214 2.2E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS05030 533a03a96946036177a8f29aeaf8055f 274 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS05030 533a03a96946036177a8f29aeaf8055f 274 SUPERFAMILY SSF52540 5 228 1.59E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 SUPERFAMILY SSF52374 16 179 7.04E-31 T 11-11-2016 S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 Gene3D G3DSA:3.40.50.620 1 179 1.1E-63 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 PIRSF PIRSF004491 1 309 3.6E-104 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 SMART SM00904 183 306 2.4E-56 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 Gene3D G3DSA:2.40.30.30 180 306 1.0E-40 T 11-11-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 Pfam PF06574 FAD synthetase 13 166 2.1E-52 T 11-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 SUPERFAMILY SSF82114 174 307 2.4E-45 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 Pfam PF01687 Riboflavin kinase 184 305 2.2E-36 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 S40542_RS15960 f93e1234bc1138b94360b24759af48af 309 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 1.1E-99 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS15075 3ccbdf5e8c1133b8effaa5294600fff9 101 Pfam PF06127 Protein of unknown function (DUF962) 5 98 2.8E-34 T 11-11-2016 IPR009305 Protein of unknown function DUF962 S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 SUPERFAMILY SSF55073 450 606 2.35E-39 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 Gene3D G3DSA:3.30.450.20 321 432 1.3E-7 T 11-11-2016 S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 SMART SM00267 434 605 2.5E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 SMART SM00052 615 858 1.0E-87 T 11-11-2016 IPR001633 EAL domain S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 Pfam PF00990 Diguanylate cyclase, GGDEF domain 445 600 2.3E-36 T 11-11-2016 IPR000160 GGDEF domain S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 Gene3D G3DSA:3.30.70.270 446 612 3.1E-45 T 11-11-2016 S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 SUPERFAMILY SSF55785 312 432 2.47E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 Pfam PF00563 EAL domain 624 853 3.7E-64 T 11-11-2016 IPR001633 EAL domain S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 SUPERFAMILY SSF141868 620 863 2.35E-74 T 11-11-2016 IPR001633 EAL domain S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 Gene3D G3DSA:3.20.20.450 619 863 3.3E-79 T 11-11-2016 IPR001633 EAL domain S40542_RS19650 a8c1384ae3bf7f67f7376127cefd841a 876 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 442 603 2.5E-32 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 SUPERFAMILY SSF50677 226 417 2.62E-56 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 861 0.0 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 406 5.5E-78 T 11-11-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 SUPERFAMILY SSF52374 418 670 8.05E-143 T 11-11-2016 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 SUPERFAMILY SSF52374 4 226 8.05E-143 T 11-11-2016 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 622 661 5.5E-8 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 420 593 9.7E-9 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 2.7E-27 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.2E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 526 548 6.2E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.2E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 559 569 6.2E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.2E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 487 505 6.2E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.2E-52 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Pfam PF08264 Anticodon-binding domain of tRNA 701 823 4.1E-19 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 SUPERFAMILY SSF47323 665 861 1.85E-37 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Gene3D G3DSA:1.10.730.10 651 797 8.8E-45 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Gene3D G3DSA:3.40.50.620 4 222 8.9E-154 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Gene3D G3DSA:3.40.50.620 427 575 8.9E-154 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Gene3D G3DSA:3.40.50.620 621 650 8.9E-154 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Gene3D G3DSA:3.90.740.10 223 426 2.3E-59 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 861 23.487 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 S40542_RS05665 dad5a526a9f864f46f13f531e8f1af02 862 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 SUPERFAMILY SSF52172 1 182 1.85E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 Gene3D G3DSA:3.40.50.300 141 308 2.5E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 SMART SM00448 2 118 4.4E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 Pfam PF00072 Response regulator receiver domain 4 119 5.3E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 SUPERFAMILY SSF52540 147 379 4.11E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 Gene3D G3DSA:3.40.50.2300 1 124 1.4E-28 T 11-11-2016 S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 SUPERFAMILY SSF46689 350 438 7.17E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 Gene3D G3DSA:1.10.8.60 309 382 1.1E-20 T 11-11-2016 S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 SMART SM00382 157 300 4.8E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 Pfam PF00158 Sigma-54 interaction domain 143 303 5.0E-60 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 Pfam PF02954 Bacterial regulatory protein, Fis family 395 436 6.4E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS11190 5873c48335c4221fc58f1f433fc36301 444 Gene3D G3DSA:1.10.10.60 383 438 1.9E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS04555 cce02765abc628b970f6fc1a507f6f8a 349 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.2E-152 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 S40542_RS04555 cce02765abc628b970f6fc1a507f6f8a 349 Gene3D G3DSA:3.40.50.300 100 341 4.1E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04555 cce02765abc628b970f6fc1a507f6f8a 349 Pfam PF00437 Type II/IV secretion system protein 12 267 3.5E-49 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 S40542_RS04555 cce02765abc628b970f6fc1a507f6f8a 349 SUPERFAMILY SSF52540 5 334 2.78E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04555 cce02765abc628b970f6fc1a507f6f8a 349 SMART SM00382 122 247 0.0036 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS04555 cce02765abc628b970f6fc1a507f6f8a 349 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 S40542_RS05990 7358f0d2ab1bfec5ea80a2882d297d4c 134 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 5 115 2.3E-39 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 S40542_RS05990 7358f0d2ab1bfec5ea80a2882d297d4c 134 SUPERFAMILY SSF89919 1 105 5.76E-36 T 11-11-2016 IPR023799 Ribosome-binding factor A domain S40542_RS05990 7358f0d2ab1bfec5ea80a2882d297d4c 134 Gene3D G3DSA:3.30.300.20 3 119 9.4E-41 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS05990 7358f0d2ab1bfec5ea80a2882d297d4c 134 Pfam PF02033 Ribosome-binding factor A 6 110 7.5E-33 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 S40542_RS05990 7358f0d2ab1bfec5ea80a2882d297d4c 134 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 2 118 22.995 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 S40542_RS05990 7358f0d2ab1bfec5ea80a2882d297d4c 134 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 98 3.0E-38 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 S40542_RS01490 fb544107677cbf99052e79f749728391 224 Gene3D G3DSA:3.40.1050.10 6 221 8.0E-76 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS01490 fb544107677cbf99052e79f749728391 224 SMART SM00947 35 197 8.6E-70 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS01490 fb544107677cbf99052e79f749728391 224 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 47 54 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS01490 fb544107677cbf99052e79f749728391 224 Pfam PF00484 Carbonic anhydrase 42 192 1.1E-52 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS01490 fb544107677cbf99052e79f749728391 224 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 87 107 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS01490 fb544107677cbf99052e79f749728391 224 SUPERFAMILY SSF53056 4 216 1.83E-74 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS17180 10ab1d49d531f9df1bf3cc7ce35b6e93 255 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 3.3E-13 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS17180 10ab1d49d531f9df1bf3cc7ce35b6e93 255 Gene3D G3DSA:3.60.15.10 4 255 7.6E-84 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS17180 10ab1d49d531f9df1bf3cc7ce35b6e93 255 SUPERFAMILY SSF56281 3 255 1.31E-63 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS17180 10ab1d49d531f9df1bf3cc7ce35b6e93 255 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 168 255 5.3E-24 T 11-11-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 S40542_RS17180 10ab1d49d531f9df1bf3cc7ce35b6e93 255 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 255 5.8E-97 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 S40542_RS17180 10ab1d49d531f9df1bf3cc7ce35b6e93 255 PIRSF PIRSF005457 1 255 4.7E-90 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 S40542_RS17180 10ab1d49d531f9df1bf3cc7ce35b6e93 255 SMART SM00849 12 167 9.2E-33 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS17180 10ab1d49d531f9df1bf3cc7ce35b6e93 255 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 255 40.343 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 S40542_RS09975 4c1a843fa5d6fcca3bafaba3bdb0a2a6 312 SUPERFAMILY SSF55781 15 151 9.08E-11 T 11-11-2016 IPR029016 GAF domain-like S40542_RS09975 4c1a843fa5d6fcca3bafaba3bdb0a2a6 312 Pfam PF01590 GAF domain 93 143 1.1E-4 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS09975 4c1a843fa5d6fcca3bafaba3bdb0a2a6 312 SUPERFAMILY SSF55073 177 288 7.61E-5 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS09975 4c1a843fa5d6fcca3bafaba3bdb0a2a6 312 Gene3D G3DSA:3.30.70.270 173 298 1.5E-5 T 11-11-2016 S40542_RS09975 4c1a843fa5d6fcca3bafaba3bdb0a2a6 312 Gene3D G3DSA:3.30.450.40 16 129 1.0E-5 T 11-11-2016 IPR029016 GAF domain-like S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.5E-30 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.3E-201 T 11-11-2016 S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.626 T 11-11-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.2E-151 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 Pfam PF04055 Radical SAM superfamily 151 325 7.8E-29 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 Pfam PF01938 TRAM domain 383 440 3.9E-18 T 11-11-2016 IPR002792 TRAM domain S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 SMART SM00729 147 367 3.6E-61 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 Gene3D G3DSA:3.80.30.20 146 379 2.4E-79 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe S40542_RS17780 985707bcb11d4e2835e050e88d0b21e3 477 SUPERFAMILY SSF102114 129 371 9.42E-62 T 11-11-2016 S40542_RS13685 14bf7958ffb49072cf87f75592865353 410 Pfam PF13650 Aspartyl protease 211 290 5.2E-8 T 11-11-2016 S40542_RS13685 14bf7958ffb49072cf87f75592865353 410 Pfam PF13650 Aspartyl protease 56 153 4.4E-10 T 11-11-2016 S40542_RS13685 14bf7958ffb49072cf87f75592865353 410 SUPERFAMILY SSF50630 49 163 4.42E-10 T 11-11-2016 IPR021109 Aspartic peptidase domain S40542_RS13685 14bf7958ffb49072cf87f75592865353 410 Gene3D G3DSA:2.40.70.10 49 113 8.1E-4 T 11-11-2016 IPR021109 Aspartic peptidase domain S40542_RS13685 14bf7958ffb49072cf87f75592865353 410 SMART SM00228 321 391 0.0019 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS13685 14bf7958ffb49072cf87f75592865353 410 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 66 77 - T 11-11-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 S40542_RS13685 14bf7958ffb49072cf87f75592865353 410 Gene3D G3DSA:2.30.42.10 322 383 2.7E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS13685 14bf7958ffb49072cf87f75592865353 410 SUPERFAMILY SSF50156 320 391 8.28E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS01810 8d13356df026ae26367870cd8709c846 553 SUPERFAMILY SSF90123 18 306 1.7E-18 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS01810 8d13356df026ae26367870cd8709c846 553 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS01810 8d13356df026ae26367870cd8709c846 553 Pfam PF00005 ABC transporter 356 490 3.9E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS01810 8d13356df026ae26367870cd8709c846 553 Gene3D G3DSA:3.40.50.300 334 546 6.8E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01810 8d13356df026ae26367870cd8709c846 553 SUPERFAMILY SSF52540 334 546 3.2E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01810 8d13356df026ae26367870cd8709c846 553 SMART SM00382 363 539 4.8E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS01810 8d13356df026ae26367870cd8709c846 553 Pfam PF00664 ABC transporter transmembrane region 19 206 1.3E-7 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS01810 8d13356df026ae26367870cd8709c846 553 Gene3D G3DSA:1.20.1560.10 19 306 2.3E-14 T 11-11-2016 S40542_RS01810 8d13356df026ae26367870cd8709c846 553 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 19 543 5.4E-104 T 11-11-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 Gene3D G3DSA:1.10.1060.10 212 269 2.0E-8 T 11-11-2016 S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 Gene3D G3DSA:2.60.40.10 343 458 1.0E-30 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 Gene3D G3DSA:3.30.70.20 270 316 3.2E-7 T 11-11-2016 S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 343 458 9.0E-27 T 11-11-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 SUPERFAMILY SSF54862 162 350 5.34E-26 T 11-11-2016 S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 SUPERFAMILY SSF54862 94 116 5.34E-26 T 11-11-2016 S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 30 458 1.7E-164 T 11-11-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 Pfam PF12801 4Fe-4S binding domain 84 123 9.4E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 Pfam PF13746 4Fe-4S dicluster domain 208 313 8.6E-43 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain S40542_RS09160 7054ffafb8fd210b3afa3410ad4841f7 460 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 261 272 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS16845 0c450a2366f1767437a27483d67d2bdf 530 SUPERFAMILY SSF53850 25 525 4.71E-130 T 11-11-2016 S40542_RS16845 0c450a2366f1767437a27483d67d2bdf 530 Gene3D G3DSA:3.90.76.10 33 212 6.7E-41 T 11-11-2016 S40542_RS16845 0c450a2366f1767437a27483d67d2bdf 530 Gene3D G3DSA:3.10.105.10 286 498 6.8E-61 T 11-11-2016 S40542_RS16845 0c450a2366f1767437a27483d67d2bdf 530 PIRSF PIRSF002741 3 527 1.9E-104 T 11-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 S40542_RS16845 0c450a2366f1767437a27483d67d2bdf 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 445 1.3E-89 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain S40542_RS07280 def81c26f9236bd8efd86783f8ed48b6 273 Pfam PF03059 Nicotianamine synthase protein 12 271 1.4E-40 T 11-11-2016 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 S40542_RS07280 def81c26f9236bd8efd86783f8ed48b6 273 SUPERFAMILY SSF53335 102 256 3.02E-11 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS07280 def81c26f9236bd8efd86783f8ed48b6 273 Gene3D G3DSA:3.40.50.150 110 261 1.1E-7 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS16850 c094f8b36b0d1d556ae7d74e82983688 343 Gene3D G3DSA:1.10.3720.10 90 161 9.2E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS16850 c094f8b36b0d1d556ae7d74e82983688 343 Gene3D G3DSA:1.10.3720.10 203 327 9.2E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS16850 c094f8b36b0d1d556ae7d74e82983688 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 4.3E-44 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS16850 c094f8b36b0d1d556ae7d74e82983688 343 SUPERFAMILY SSF161098 91 160 2.62E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS16850 c094f8b36b0d1d556ae7d74e82983688 343 SUPERFAMILY SSF161098 200 321 2.62E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 Gene3D G3DSA:3.30.300.30 431 530 1.7E-29 T 11-11-2016 S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 Gene3D G3DSA:2.30.38.10 356 429 7.8E-20 T 11-11-2016 S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 521 6.0E-14 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 528 1.9E-238 T 11-11-2016 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 Pfam PF00501 AMP-binding enzyme 38 436 2.8E-75 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 Gene3D G3DSA:3.40.50.980 196 355 2.2E-37 T 11-11-2016 S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 SUPERFAMILY SSF56801 6 531 3.4E-129 T 11-11-2016 S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 Gene3D G3DSA:3.40.50.980 173 195 1.9E-26 T 11-11-2016 S40542_RS19750 0cfad66b5ac24a5af314b0064bfaf75d 532 Gene3D G3DSA:3.40.50.980 24 138 1.9E-26 T 11-11-2016 S40542_RS12790 1d7f5d3ae1d1688da5cce29585d212a9 158 Pfam PF00293 NUDIX domain 14 129 1.6E-10 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS12790 1d7f5d3ae1d1688da5cce29585d212a9 158 Gene3D G3DSA:3.90.79.10 10 148 1.7E-25 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS12790 1d7f5d3ae1d1688da5cce29585d212a9 158 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 S40542_RS12790 1d7f5d3ae1d1688da5cce29585d212a9 158 SUPERFAMILY SSF55811 15 139 4.2E-21 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS09445 d3801269edaac980692df78e2d95e692 425 Gene3D G3DSA:3.90.1580.10 183 424 1.5E-46 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 S40542_RS09445 d3801269edaac980692df78e2d95e692 425 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 16 421 1.3E-147 T 11-11-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 S40542_RS09445 d3801269edaac980692df78e2d95e692 425 Pfam PF03781 Sulfatase-modifying factor enzyme 1 350 422 1.1E-5 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 S40542_RS09445 d3801269edaac980692df78e2d95e692 425 Pfam PF03781 Sulfatase-modifying factor enzyme 1 185 336 5.2E-19 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 S40542_RS09445 d3801269edaac980692df78e2d95e692 425 Pfam PF12867 DinB superfamily 22 151 4.7E-10 T 11-11-2016 IPR024775 DinB-like domain S40542_RS09445 d3801269edaac980692df78e2d95e692 425 SUPERFAMILY SSF56436 183 424 7.53E-55 T 11-11-2016 IPR016187 C-type lectin fold S40542_RS18445 94225b482d6a8ab41f9fe5ab5660081e 218 SMART SM00100 2 122 0.0034 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS18445 94225b482d6a8ab41f9fe5ab5660081e 218 Gene3D G3DSA:2.60.120.10 5 129 3.9E-18 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS18445 94225b482d6a8ab41f9fe5ab5660081e 218 Pfam PF00027 Cyclic nucleotide-binding domain 25 108 3.2E-11 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS18445 94225b482d6a8ab41f9fe5ab5660081e 218 SUPERFAMILY SSF51206 15 130 9.17E-19 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS04055 84defb41b748386f859d3e73468ef984 650 SMART SM00388 421 491 5.2E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 388 1.3E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS04055 84defb41b748386f859d3e73468ef984 650 Pfam PF00512 His Kinase A (phospho-acceptor) domain 421 491 4.4E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 Pfam PF00072 Response regulator receiver domain 131 240 7.7E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 SUPERFAMILY SSF47384 407 492 1.0E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 Gene3D G3DSA:3.30.565.10 477 647 4.9E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04055 84defb41b748386f859d3e73468ef984 650 Pfam PF13426 PAS domain 282 380 2.3E-7 T 11-11-2016 IPR000014 PAS domain S40542_RS04055 84defb41b748386f859d3e73468ef984 650 SMART SM00387 537 648 5.7E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04055 84defb41b748386f859d3e73468ef984 650 Gene3D G3DSA:3.40.50.2300 130 261 1.5E-24 T 11-11-2016 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 Gene3D G3DSA:3.30.450.20 265 370 5.6E-13 T 11-11-2016 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 SUPERFAMILY SSF55874 480 646 4.06E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04055 84defb41b748386f859d3e73468ef984 650 SMART SM00448 129 240 7.4E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 538 645 4.3E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04055 84defb41b748386f859d3e73468ef984 650 SMART SM00091 272 338 3.7E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS04055 84defb41b748386f859d3e73468ef984 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 588 4.9E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 602 4.9E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 626 4.9E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 645 4.9E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 Gene3D G3DSA:1.10.287.130 414 476 2.5E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS04055 84defb41b748386f859d3e73468ef984 650 SUPERFAMILY SSF55785 259 376 9.25E-13 T 11-11-2016 IPR000014 PAS domain S40542_RS04055 84defb41b748386f859d3e73468ef984 650 SUPERFAMILY SSF52172 129 267 1.38E-24 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS11330 b7c0e1ee28094e38b7a4ffa137893dff 140 SUPERFAMILY SSF51182 38 130 7.31E-15 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS11330 b7c0e1ee28094e38b7a4ffa137893dff 140 Gene3D G3DSA:2.60.120.10 43 129 2.0E-13 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS11330 b7c0e1ee28094e38b7a4ffa137893dff 140 Pfam PF07883 Cupin domain 60 127 5.0E-11 T 11-11-2016 IPR013096 Cupin 2, conserved barrel S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SUPERFAMILY SSF52058 157 411 3.3E-36 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 Pfam PF08477 Ras of Complex, Roc, domain of DAPkinase 427 566 1.1E-11 T 11-11-2016 IPR013684 Mitochondrial Rho-like GO:0005525|GO:0007264 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 Pfam PF13676 TIR domain 989 1090 1.0E-16 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SUPERFAMILY SSF52200 984 1105 3.4E-18 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 Gene3D G3DSA:3.40.50.10140 988 1108 1.4E-10 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SMART SM00365 355 376 18.0 T 11-11-2016 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SMART SM00365 267 288 12.0 T 11-11-2016 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SMART SM00365 289 310 320.0 T 11-11-2016 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SMART SM00365 311 332 180.0 T 11-11-2016 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SMART SM00365 333 354 29.0 T 11-11-2016 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SMART SM00255 986 1120 8.5E-7 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 Gene3D G3DSA:3.80.10.10 228 411 2.3E-37 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 Gene3D G3DSA:3.80.10.10 667 668 2.3E-37 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SUPERFAMILY SSF52058 20 218 4.59E-15 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 Gene3D G3DSA:3.40.50.300 423 578 1.6E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 SUPERFAMILY SSF52540 423 575 4.15E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 Gene3D G3DSA:3.80.10.10 18 227 1.2E-13 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS02440 2a2c4634ffad231cc80404129c475696 1154 Pfam PF16095 C-terminal of Roc, COR, domain 670 819 4.9E-13 T 11-11-2016 IPR032171 C-terminal of Roc (COR) domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 S40542_RS18220 3141df4eeb059fdbaefb6c596413f5e5 426 SUPERFAMILY SSF141868 17 208 4.05E-23 T 11-11-2016 IPR001633 EAL domain S40542_RS18220 3141df4eeb059fdbaefb6c596413f5e5 426 SMART SM00052 6 210 4.5E-5 T 11-11-2016 IPR001633 EAL domain S40542_RS18220 3141df4eeb059fdbaefb6c596413f5e5 426 SUPERFAMILY SSF109604 196 384 4.08E-29 T 11-11-2016 S40542_RS18220 3141df4eeb059fdbaefb6c596413f5e5 426 Pfam PF08668 HDOD domain 220 333 7.7E-13 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS18220 3141df4eeb059fdbaefb6c596413f5e5 426 Pfam PF00563 EAL domain 82 205 3.9E-14 T 11-11-2016 IPR001633 EAL domain S40542_RS18220 3141df4eeb059fdbaefb6c596413f5e5 426 Gene3D G3DSA:3.20.20.450 94 132 7.0E-4 T 11-11-2016 IPR001633 EAL domain S40542_RS18220 3141df4eeb059fdbaefb6c596413f5e5 426 Gene3D G3DSA:1.10.3150.10 188 362 1.0E-26 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS18220 3141df4eeb059fdbaefb6c596413f5e5 426 PIRSF PIRSF003180 13 411 9.2E-102 T 11-11-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing S40542_RS11575 708005faacabc0b5afb60c83d5923f37 336 SUPERFAMILY SSF51395 1 336 2.49E-103 T 11-11-2016 S40542_RS11575 708005faacabc0b5afb60c83d5923f37 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 S40542_RS11575 708005faacabc0b5afb60c83d5923f37 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 1.5E-92 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 S40542_RS11575 708005faacabc0b5afb60c83d5923f37 336 PIRSF PIRSF000164 10 336 4.4E-101 T 11-11-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 S40542_RS11575 708005faacabc0b5afb60c83d5923f37 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 335 2.4E-138 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS11575 708005faacabc0b5afb60c83d5923f37 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 49.366 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS11575 708005faacabc0b5afb60c83d5923f37 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 S40542_RS11575 708005faacabc0b5afb60c83d5923f37 336 Gene3D G3DSA:3.20.20.70 1 336 1.3E-127 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS10715 1b7b85bffa95eb10701b0b8ba8f3dd53 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 1.3E-50 T 11-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS10715 1b7b85bffa95eb10701b0b8ba8f3dd53 376 Gene3D G3DSA:1.10.620.20 3 340 6.1E-122 T 11-11-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 S40542_RS10715 1b7b85bffa95eb10701b0b8ba8f3dd53 376 SUPERFAMILY SSF47240 3 340 1.33E-113 T 11-11-2016 IPR009078 Ferritin-like superfamily S40542_RS15675 1137d571648829cc1497796b1982a13b 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 226 4.9E-34 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 S40542_RS15675 1137d571648829cc1497796b1982a13b 265 SUPERFAMILY SSF52096 2 260 4.04E-58 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS15675 1137d571648829cc1497796b1982a13b 265 Gene3D G3DSA:3.90.226.10 2 251 4.9E-55 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 SUPERFAMILY SSF55874 290 426 3.01E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 SMART SM00388 219 284 0.0095 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 426 1.3E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 Gene3D G3DSA:1.10.287.130 215 280 1.2E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 SUPERFAMILY SSF47384 213 280 1.37E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 389 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 SMART SM00387 322 427 4.9E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00360 69898e4b46eadbae26e4e68f85f9eda9 427 Gene3D G3DSA:3.30.565.10 284 426 8.1E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 Gene3D G3DSA:3.40.30.10 200 293 8.6E-8 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 300 415 7.2E-36 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 Gene3D G3DSA:3.30.1060.10 22 187 7.0E-60 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 Pfam PF01641 SelR domain 300 413 1.3E-31 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 SUPERFAMILY SSF55068 21 196 1.06E-58 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 SUPERFAMILY SSF51316 300 415 2.14E-36 T 11-11-2016 IPR011057 Mss4-like S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 Pfam PF01625 Peptide methionine sulfoxide reductase 30 187 1.6E-52 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 Gene3D G3DSA:2.170.150.20 300 416 1.3E-36 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 27 193 31.147 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 SUPERFAMILY SSF52833 201 292 1.86E-11 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS10220 f3cafbea0167e402a557637a55380e24 417 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 30 187 3.8E-48 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Gene3D G3DSA:3.30.300.30 861 973 5.0E-39 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Gene3D G3DSA:2.30.38.10 777 856 2.8E-21 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 SUPERFAMILY SSF52777 222 459 1.45E-40 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Gene3D G3DSA:1.10.1200.10 974 1040 6.0E-26 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 1551 1835 1.9E-42 T 11-11-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 SUPERFAMILY SSF56801 484 982 9.81E-135 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 508 890 1.5E-121 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 SUPERFAMILY SSF52777 43 214 3.45E-37 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 SMART SM00823 Phosphopantetheine attachment site 970 1039 4.1E-4 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Gene3D G3DSA:3.60.130.10 1717 1839 3.6E-49 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Gene3D G3DSA:3.60.130.10 1543 1685 3.6E-49 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 ProSitePatterns PS00455 Putative AMP-binding domain signature. 624 635 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Gene3D G3DSA:3.40.50.980 484 630 1.4E-42 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 SUPERFAMILY SSF52777 1057 1236 2.22E-42 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Pfam PF13745 HxxPF-repeated domain 1377 1467 4.8E-12 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Pfam PF13745 HxxPF-repeated domain 353 441 1.9E-6 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Gene3D G3DSA:3.40.50.980 631 772 4.1E-36 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Pfam PF00668 Condensation domain 1053 1355 1.4E-63 T 11-11-2016 IPR001242 Condensation domain S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Pfam PF00668 Condensation domain 42 324 1.1E-57 T 11-11-2016 IPR001242 Condensation domain S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 ProSitePatterns PS00012 Phosphopantetheine attachment site. 994 1009 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Pfam PF00550 Phosphopantetheine attachment site 971 1035 1.1E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Pfam PF13193 AMP-binding enzyme C-terminal domain 874 945 1.8E-12 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 SUPERFAMILY SSF52777 1246 1484 5.78E-41 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 SUPERFAMILY SSF47336 962 1035 2.88E-19 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 SUPERFAMILY SSF51197 1526 1837 1.1E-73 T 11-11-2016 S40542_RS19795 5858e1d308564f881f7d44d7c56b5512 1859 Pfam PF00501 AMP-binding enzyme 490 866 6.8E-89 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 SUPERFAMILY SSF46955 2 119 1.72E-31 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 SMART SM00422 2 71 4.4E-29 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 Gene3D G3DSA:1.10.1660.10 1 56 1.5E-26 T 11-11-2016 S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 Pfam PF13411 MerR HTH family regulatory protein 2 69 1.9E-18 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 Gene3D G3DSA:1.10.1660.10 57 133 7.4E-23 T 11-11-2016 S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 5.4E-11 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 5.4E-11 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS02525 82caf2e31b209dcf56bdfd071f47166f 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 5.4E-11 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 SUPERFAMILY SSF51998 222 740 3.36E-166 T 11-11-2016 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.3E-41 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.3E-41 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.3E-41 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.3E-41 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.3E-41 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.3E-41 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 SUPERFAMILY SSF48168 10 221 1.44E-74 T 11-11-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 4.3E-13 T 11-11-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 Pfam PF03477 ATP cone domain 6 92 3.6E-19 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 Gene3D G3DSA:3.20.70.20 610 700 4.1E-46 T 11-11-2016 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 Gene3D G3DSA:3.20.70.20 398 559 4.1E-46 T 11-11-2016 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 Gene3D G3DSA:3.20.70.20 127 344 4.1E-46 T 11-11-2016 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 6.3E-120 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS09460 8de3115fbfc66461d740ed6921c820be 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.5E-177 T 11-11-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 S40542_RS02580 7062e538b9469eda0dcecdd4e57e8084 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 S40542_RS02580 7062e538b9469eda0dcecdd4e57e8084 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 32.19 T 11-11-2016 IPR002930 Glycine cleavage system H-protein S40542_RS02580 7062e538b9469eda0dcecdd4e57e8084 129 Pfam PF01597 Glycine cleavage H-protein 8 127 2.8E-49 T 11-11-2016 IPR002930 Glycine cleavage system H-protein S40542_RS02580 7062e538b9469eda0dcecdd4e57e8084 129 Gene3D G3DSA:2.40.50.100 7 128 4.4E-51 T 11-11-2016 S40542_RS02580 7062e538b9469eda0dcecdd4e57e8084 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 4.6E-56 T 11-11-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 S40542_RS02580 7062e538b9469eda0dcecdd4e57e8084 129 SUPERFAMILY SSF51230 3 127 2.23E-46 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS15830 2e8ea55531762928349ab2c6bf7195d5 265 Pfam PF00005 ABC transporter 18 169 3.3E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS15830 2e8ea55531762928349ab2c6bf7195d5 265 Gene3D G3DSA:3.40.50.300 3 229 4.1E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15830 2e8ea55531762928349ab2c6bf7195d5 265 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS15830 2e8ea55531762928349ab2c6bf7195d5 265 SMART SM00382 26 217 2.1E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS15830 2e8ea55531762928349ab2c6bf7195d5 265 SUPERFAMILY SSF52540 3 232 1.29E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09580 3af83137ff7dd49ed073cf2b116bf156 202 SUPERFAMILY SSF49503 40 131 1.36E-8 T 11-11-2016 IPR008972 Cupredoxin S40542_RS09580 3af83137ff7dd49ed073cf2b116bf156 202 Gene3D G3DSA:2.60.40.420 39 129 1.7E-8 T 11-11-2016 IPR008972 Cupredoxin S40542_RS16735 a275b460bc48c66465b006ed0b13fc3c 574 Gene3D G3DSA:2.40.50.100 212 243 1.1E-11 T 11-11-2016 S40542_RS16735 a275b460bc48c66465b006ed0b13fc3c 574 Gene3D G3DSA:2.40.50.100 128 161 1.1E-11 T 11-11-2016 S40542_RS16735 a275b460bc48c66465b006ed0b13fc3c 574 Pfam PF11604 Copper binding periplasmic protein CusF 417 483 3.3E-22 T 11-11-2016 IPR021647 Copper binding periplasmic protein CusF S40542_RS16735 a275b460bc48c66465b006ed0b13fc3c 574 Pfam PF11604 Copper binding periplasmic protein CusF 497 561 1.4E-13 T 11-11-2016 IPR021647 Copper binding periplasmic protein CusF S40542_RS16735 a275b460bc48c66465b006ed0b13fc3c 574 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 217 390 8.2E-34 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS16735 a275b460bc48c66465b006ed0b13fc3c 574 SUPERFAMILY SSF111369 124 322 1.57E-19 T 11-11-2016 S40542_RS16735 a275b460bc48c66465b006ed0b13fc3c 574 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 318 7.4E-82 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 Gene3D G3DSA:3.40.50.180 189 378 2.3E-71 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 381 38.84 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 SMART SM00448 3 122 8.9E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 Pfam PF00072 Response regulator receiver domain 5 109 2.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 PIRSF PIRSF000876 1 382 5.5E-127 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 Pfam PF01339 CheB methylesterase 196 375 2.9E-58 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 SUPERFAMILY SSF52738 191 378 1.7E-61 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 Gene3D G3DSA:3.40.50.2300 3 110 1.3E-29 T 11-11-2016 S40542_RS06475 f20e395a01a5b35ccb1b2b3f6ba829a5 383 SUPERFAMILY SSF52172 4 109 8.11E-27 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03760 ca578670a12242b8e7baf8b37ec95146 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 253 9.1E-9 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS03760 ca578670a12242b8e7baf8b37ec95146 282 Gene3D G3DSA:3.40.190.10 36 146 3.9E-4 T 11-11-2016 S40542_RS03760 ca578670a12242b8e7baf8b37ec95146 282 SUPERFAMILY SSF53850 27 262 7.93E-16 T 11-11-2016 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 9.9E-9 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 SUPERFAMILY SSF47203 360 507 3.38E-21 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.8E-10 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 Gene3D G3DSA:1.10.540.10 95 234 3.9E-28 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 Gene3D G3DSA:1.20.140.10 349 507 4.9E-24 T 11-11-2016 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 133 232 7.5E-15 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 SUPERFAMILY SSF56645 120 355 2.49E-43 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 Pfam PF09317 Domain of unknown function (DUF1974) 514 796 4.9E-108 T 11-11-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 S40542_RS17085 fcf3c9bbb66fcce5207790abbbb3dc64 816 Gene3D G3DSA:2.40.110.10 237 348 1.0E-16 T 11-11-2016 S40542_RS14425 e1e1a0e852144faede42ef304f3ccad8 346 PIRSF PIRSF002465 3 342 6.2E-122 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 S40542_RS14425 e1e1a0e852144faede42ef304f3ccad8 346 Gene3D G3DSA:3.40.718.10 4 337 2.3E-126 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 S40542_RS14425 e1e1a0e852144faede42ef304f3ccad8 346 SUPERFAMILY SSF53659 5 338 9.46E-101 T 11-11-2016 S40542_RS14425 e1e1a0e852144faede42ef304f3ccad8 346 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 342 134.579 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 S40542_RS14425 e1e1a0e852144faede42ef304f3ccad8 346 Pfam PF02504 Fatty acid synthesis protein 6 325 2.4E-101 T 11-11-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 S40542_RS14425 e1e1a0e852144faede42ef304f3ccad8 346 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 339 1.3E-105 T 11-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 S40542_RS00935 3f2e188d7d4d26f659176ffdfd6b5e12 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.078 T 11-11-2016 IPR023036 Ribosomal protein S14, bacterial/plastid S40542_RS00935 3f2e188d7d4d26f659176ffdfd6b5e12 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.7E-28 T 11-11-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS00935 3f2e188d7d4d26f659176ffdfd6b5e12 101 Gene3D G3DSA:4.10.830.10 41 101 1.7E-32 T 11-11-2016 S40542_RS00935 3f2e188d7d4d26f659176ffdfd6b5e12 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-11-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00935 3f2e188d7d4d26f659176ffdfd6b5e12 101 SUPERFAMILY SSF57716 2 101 1.07E-39 T 11-11-2016 S40542_RS02640 4c0e2ae38a5050aa3f2c66cabea10ea2 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 8.4E-22 T 11-11-2016 S40542_RS02640 4c0e2ae38a5050aa3f2c66cabea10ea2 92 SUPERFAMILY SSF54534 4 89 2.22E-26 T 11-11-2016 S40542_RS02640 4c0e2ae38a5050aa3f2c66cabea10ea2 92 Gene3D G3DSA:3.10.50.40 4 91 6.1E-36 T 11-11-2016 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 Gene3D G3DSA:3.40.50.720 53 88 8.8E-10 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 Pfam PF01593 Flavin containing amine oxidoreductase 66 580 6.5E-56 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 SUPERFAMILY SSF51905 54 424 1.83E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 SUPERFAMILY SSF51905 546 584 1.83E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 Gene3D G3DSA:3.50.50.60 297 405 1.3E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 Gene3D G3DSA:3.50.50.60 549 587 1.3E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 SUPERFAMILY SSF49899 629 797 1.58E-24 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 632 776 6.0E-17 T 11-11-2016 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 SMART SM00282 635 768 1.0E-7 T 11-11-2016 IPR001791 Laminin G domain S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 Gene3D G3DSA:2.60.120.200 618 782 6.3E-21 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 SMART SM00560 635 773 0.0099 T 11-11-2016 IPR006558 LamG-like jellyroll fold S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 SUPERFAMILY SSF54373 405 529 5.63E-16 T 11-11-2016 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 Gene3D G3DSA:3.90.660.10 409 519 1.9E-22 T 11-11-2016 S40542_RS10810 68673824a5091d8edf55e8b34484976d 822 Gene3D G3DSA:3.90.660.10 89 163 1.9E-22 T 11-11-2016 S40542_RS09880 f8cdf1ccf956bf04c35fade11996056b 293 PIRSF PIRSF016184 2 291 3.6E-63 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 S40542_RS09880 f8cdf1ccf956bf04c35fade11996056b 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 282 1.1E-52 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 S40542_RS09880 f8cdf1ccf956bf04c35fade11996056b 293 Gene3D G3DSA:3.10.310.10 123 279 1.4E-34 T 11-11-2016 S40542_RS09880 f8cdf1ccf956bf04c35fade11996056b 293 Pfam PF02567 Phenazine biosynthesis-like protein 15 281 3.1E-49 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 S40542_RS09880 f8cdf1ccf956bf04c35fade11996056b 293 Gene3D G3DSA:3.10.310.10 3 122 1.2E-32 T 11-11-2016 S40542_RS09880 f8cdf1ccf956bf04c35fade11996056b 293 SUPERFAMILY SSF54506 4 283 1.4E-56 T 11-11-2016 S40542_RS20755 76f7821306ab345b085b0bf90b62ad83 148 SUPERFAMILY SSF52218 1 145 1.68E-38 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS20755 76f7821306ab345b085b0bf90b62ad83 148 Gene3D G3DSA:3.40.50.360 1 146 4.0E-36 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS20755 76f7821306ab345b085b0bf90b62ad83 148 PRINTS PR00369 Flavodoxin signature 104 123 8.4E-10 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS20755 76f7821306ab345b085b0bf90b62ad83 148 PRINTS PR00369 Flavodoxin signature 80 90 8.4E-10 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS20755 76f7821306ab345b085b0bf90b62ad83 148 PRINTS PR00369 Flavodoxin signature 50 61 8.4E-10 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS20755 76f7821306ab345b085b0bf90b62ad83 148 PRINTS PR00369 Flavodoxin signature 5 18 8.4E-10 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS20755 76f7821306ab345b085b0bf90b62ad83 148 Pfam PF00258 Flavodoxin 6 136 9.5E-23 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Pfam PF00550 Phosphopantetheine attachment site 1385 1444 3.4E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SUPERFAMILY SSF53901 408 429 2.62E-80 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SUPERFAMILY SSF53901 9 374 2.62E-80 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Gene3D G3DSA:3.40.366.10 714 815 9.8E-67 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Gene3D G3DSA:3.40.366.10 515 649 9.8E-67 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 381 1.2E-41 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SUPERFAMILY SSF55048 652 713 1.06E-9 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SUPERFAMILY SSF47336 1376 1447 1.44E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 385 492 6.9E-17 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1407 1422 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 170 186 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Gene3D G3DSA:3.40.47.10 11 269 1.2E-70 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 524 819 9.0E-84 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Gene3D G3DSA:3.30.70.250 652 713 3.1E-7 T 11-11-2016 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SUPERFAMILY SSF51735 910 1087 4.72E-5 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1106 1300 5.1E-24 T 11-11-2016 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SUPERFAMILY SSF52151 521 654 1.96E-58 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SUPERFAMILY SSF52151 714 807 1.96E-58 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SMART SM00825 Beta-ketoacyl synthase 11 433 4.1E-162 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 SUPERFAMILY SSF51735 1106 1338 2.28E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Pfam PF08659 KR domain 1109 1298 8.1E-37 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 10 257 8.3E-66 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Gene3D G3DSA:1.10.1200.10 1372 1451 2.1E-22 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Pfam PF00698 Acyl transferase domain 524 815 7.6E-37 T 11-11-2016 IPR014043 Acyl transferase S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Gene3D G3DSA:3.40.47.10 270 434 7.9E-60 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Gene3D G3DSA:3.40.50.720 1106 1303 2.3E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19810 6fc2f4a1ec0865473584de2065e3001d 1455 Gene3D G3DSA:3.40.50.720 1338 1356 2.3E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 SUPERFAMILY SSF56925 24 173 2.62E-10 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 Gene3D G3DSA:4.10.1080.10 198 227 1.4E-4 T 11-11-2016 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 PRINTS PR01021 OMPA domain signature 272 287 6.1E-8 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 PRINTS PR01021 OMPA domain signature 242 264 6.1E-8 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 PRINTS PR01021 OMPA domain signature 287 303 6.1E-8 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 Pfam PF13505 Outer membrane protein beta-barrel domain 9 171 1.5E-10 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 Gene3D G3DSA:3.30.1330.60 231 343 7.7E-34 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 SUPERFAMILY SSF103088 212 341 1.57E-32 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 Gene3D G3DSA:2.40.160.20 10 193 3.7E-13 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS01035 966a8b9a51bf662f992178ea9aa3d1b5 352 Pfam PF00691 OmpA family 242 336 3.6E-20 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS10250 5a35789f562be65a5ee59a189d070150 174 SUPERFAMILY SSF46689 3 76 4.67E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS10250 5a35789f562be65a5ee59a189d070150 174 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 4.3E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS10250 5a35789f562be65a5ee59a189d070150 174 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 4.3E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS10250 5a35789f562be65a5ee59a189d070150 174 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site S40542_RS10250 5a35789f562be65a5ee59a189d070150 174 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 8.9E-14 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS10250 5a35789f562be65a5ee59a189d070150 174 Gene3D G3DSA:1.10.357.10 2 125 1.9E-25 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 Gene3D G3DSA:2.30.120.10 312 341 2.8E-5 T 11-11-2016 S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 Pfam PF01804 Penicillin amidase 35 796 1.8E-118 T 11-11-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 Gene3D G3DSA:3.60.20.10 167 195 8.8E-72 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 Gene3D G3DSA:3.60.20.10 391 611 8.8E-72 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 Gene3D G3DSA:3.60.20.10 227 311 8.8E-72 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 SUPERFAMILY SSF56235 228 704 3.34E-138 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 SUPERFAMILY SSF56235 31 189 3.34E-138 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 SUPERFAMILY SSF56235 732 806 3.34E-138 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS19825 f9b5271e6c33dbdd754eccb2bbfc7381 810 Gene3D G3DSA:1.10.439.10 28 166 2.1E-37 T 11-11-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 S40542_RS17100 f69285aad1c3eaaf12e42153a1e60830 298 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 44 277 1.1E-46 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region S40542_RS17100 f69285aad1c3eaaf12e42153a1e60830 298 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 181 201 2.5E-10 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) S40542_RS17100 f69285aad1c3eaaf12e42153a1e60830 298 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 158 180 2.5E-10 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) S40542_RS17100 f69285aad1c3eaaf12e42153a1e60830 298 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 260 278 2.5E-10 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) S40542_RS17100 f69285aad1c3eaaf12e42153a1e60830 298 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 218 235 2.5E-10 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) S40542_RS17100 f69285aad1c3eaaf12e42153a1e60830 298 Gene3D G3DSA:2.120.10.30 41 295 7.1E-60 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS17100 f69285aad1c3eaaf12e42153a1e60830 298 SUPERFAMILY SSF63829 23 287 5.67E-58 T 11-11-2016 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 Gene3D G3DSA:3.20.19.10 162 360 1.7E-90 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel S40542_RS01040 211769d45dacb980eef25f5680815d24 865 Pfam PF00330 Aconitase family (aconitate hydratase) 471 818 4.6E-42 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 SUPERFAMILY SSF53732 379 859 7.06E-145 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 PIRSF PIRSF036687 1 859 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 Gene3D G3DSA:3.30.499.10 402 519 2.5E-62 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 SUPERFAMILY SSF74778 2 160 1.57E-66 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.9E-95 T 11-11-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 Gene3D G3DSA:3.30.499.10 684 860 5.2E-52 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 Gene3D G3DSA:3.40.1060.10 520 682 1.9E-82 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.3E-64 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 S40542_RS01040 211769d45dacb980eef25f5680815d24 865 SUPERFAMILY SSF52016 162 372 3.81E-68 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel S40542_RS23780 3d372d5a9c7c5ee25ddaff2ea783c28d 404 SMART SM00304 136 189 0.0073 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS23780 3d372d5a9c7c5ee25ddaff2ea783c28d 404 SUPERFAMILY SSF47384 240 320 3.34E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS23780 3d372d5a9c7c5ee25ddaff2ea783c28d 404 Pfam PF00672 HAMP domain 118 185 2.1E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS23780 3d372d5a9c7c5ee25ddaff2ea783c28d 404 Gene3D G3DSA:1.10.287.130 240 319 2.8E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS23780 3d372d5a9c7c5ee25ddaff2ea783c28d 404 SUPERFAMILY SSF55874 301 402 1.89E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS23780 3d372d5a9c7c5ee25ddaff2ea783c28d 404 Gene3D G3DSA:3.30.565.10 333 391 1.1E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08360 355db0a301719ce3cb13d6b55bcb0335 582 Gene3D G3DSA:3.40.1140.10 1 98 2.6E-11 T 11-11-2016 S40542_RS08360 355db0a301719ce3cb13d6b55bcb0335 582 Gene3D G3DSA:3.40.1140.10 318 373 2.6E-11 T 11-11-2016 S40542_RS08360 355db0a301719ce3cb13d6b55bcb0335 582 SUPERFAMILY SSF52540 281 373 9.93E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08360 355db0a301719ce3cb13d6b55bcb0335 582 SUPERFAMILY SSF52540 1 174 9.93E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 Pfam PF04542 Sigma-70 region 2 21 92 3.5E-17 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 239 2.2E-80 T 11-11-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 8 242 60.422 T 11-11-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 Gene3D G3DSA:1.10.10.10 183 239 1.7E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 238 1.4E-32 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 209 235 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 PRINTS PR00046 Major sigma-70 factor signature 47 60 5.1E-12 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 PRINTS PR00046 Major sigma-70 factor signature 224 235 5.1E-12 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 PRINTS PR00046 Major sigma-70 factor signature 192 204 5.1E-12 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 PRINTS PR00046 Major sigma-70 factor signature 209 224 5.1E-12 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 PIRSF PIRSF000770 2 244 1.5E-34 T 11-11-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 SUPERFAMILY SSF88946 14 92 1.83E-24 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 SUPERFAMILY SSF88659 170 242 1.83E-18 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 SUPERFAMILY SSF88659 94 158 4.01E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 Gene3D G3DSA:1.10.601.10 18 88 2.9E-16 T 11-11-2016 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 Pfam PF04539 Sigma-70 region 3 101 146 1.2E-10 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 Gene3D G3DSA:1.10.10.10 94 139 3.2E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS06455 80c71f192e7d398cc05ad0d43755979f 244 Pfam PF04545 Sigma-70, region 4 188 237 6.3E-17 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS22125 a4de40aa13655a1ffcdc71b980455623 93 Pfam PF00484 Carbonic anhydrase 1 92 8.4E-27 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS22125 a4de40aa13655a1ffcdc71b980455623 93 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 23 43 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS22125 a4de40aa13655a1ffcdc71b980455623 93 SUPERFAMILY SSF53056 1 93 5.36E-33 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS22125 a4de40aa13655a1ffcdc71b980455623 93 Gene3D G3DSA:3.40.1050.10 1 92 9.6E-33 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS22125 a4de40aa13655a1ffcdc71b980455623 93 SMART SM00947 1 82 1.1E-6 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 S40542_RS07900 fa83bc76967293669b6c6497eefa59bf 306 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 61 180 7.9E-14 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 S40542_RS07900 fa83bc76967293669b6c6497eefa59bf 306 SUPERFAMILY SSF51695 62 300 1.26E-29 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 S40542_RS07900 fa83bc76967293669b6c6497eefa59bf 306 Gene3D G3DSA:3.20.20.190 62 296 5.7E-30 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 SUPERFAMILY SSF52172 1 139 1.02E-27 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 Gene3D G3DSA:3.20.20.450 314 563 2.1E-65 T 11-11-2016 IPR001633 EAL domain S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 SUPERFAMILY SSF55073 146 303 3.61E-48 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 Pfam PF00072 Response regulator receiver domain 3 107 5.8E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 SMART SM00448 1 117 5.8E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 SMART SM00267 130 301 4.1E-63 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 SUPERFAMILY SSF141868 316 562 4.18E-65 T 11-11-2016 IPR001633 EAL domain S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 297 4.3E-48 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 Gene3D G3DSA:3.40.50.2300 1 143 2.1E-29 T 11-11-2016 S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 299 2.2E-43 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 Pfam PF00563 EAL domain 317 552 1.4E-53 T 11-11-2016 IPR001633 EAL domain S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 Gene3D G3DSA:3.30.70.270 144 307 8.5E-55 T 11-11-2016 S40542_RS07800 d7e15bee877b0d6eac859fd4031777b5 564 SMART SM00052 311 557 7.4E-60 T 11-11-2016 IPR001633 EAL domain S40542_RS15860 0f61d2183817c34b2b10274cd21cb800 525 SUPERFAMILY SSF55931 10 518 4.77E-181 T 11-11-2016 S40542_RS15860 0f61d2183817c34b2b10274cd21cb800 525 Pfam PF04262 Glutamate-cysteine ligase 11 384 4.5E-161 T 11-11-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 S40542_RS15860 0f61d2183817c34b2b10274cd21cb800 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 19 520 2.7E-174 T 11-11-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 S40542_RS15860 0f61d2183817c34b2b10274cd21cb800 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 186.592 T 11-11-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 S40542_RS15995 b32d2998d7953dd5e5edf587a12d4e1f 306 SUPERFAMILY SSF52283 15 122 1.75E-11 T 11-11-2016 S40542_RS15995 b32d2998d7953dd5e5edf587a12d4e1f 306 SUPERFAMILY SSF51735 94 272 6.51E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15995 b32d2998d7953dd5e5edf587a12d4e1f 306 Gene3D G3DSA:3.40.50.720 46 99 5.8E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15995 b32d2998d7953dd5e5edf587a12d4e1f 306 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 271 2.0E-40 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 S40542_RS15995 b32d2998d7953dd5e5edf587a12d4e1f 306 Gene3D G3DSA:3.40.50.720 100 272 3.2E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 Gene3D G3DSA:1.10.10.10 1 56 9.6E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 SUPERFAMILY SSF46894 1 53 5.39E-7 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 Pfam PF00486 Transcriptional regulatory protein, C terminal 1 53 3.3E-6 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 Gene3D G3DSA:2.120.10.30 492 564 3.3E-5 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 Gene3D G3DSA:2.120.10.30 266 463 4.2E-20 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 Gene3D G3DSA:2.120.10.60 103 265 1.6E-14 T 11-11-2016 S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 SUPERFAMILY SSF82171 103 166 1.29E-6 T 11-11-2016 S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 SUPERFAMILY SSF82171 206 500 6.15E-24 T 11-11-2016 S40542_RS08915 5ec0519ea7bad58fad8b11f073395fcd 621 Pfam PF07676 WD40-like Beta Propeller Repeat 99 133 0.0018 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS06870 a4815c83f4e1414d4c9b57f619185d5d 615 Gene3D G3DSA:3.40.50.1820 98 400 3.2E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS06870 a4815c83f4e1414d4c9b57f619185d5d 615 PRINTS PR00412 Epoxide hydrolase signature 128 146 2.4E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 S40542_RS06870 a4815c83f4e1414d4c9b57f619185d5d 615 PRINTS PR00412 Epoxide hydrolase signature 148 163 2.4E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 S40542_RS06870 a4815c83f4e1414d4c9b57f619185d5d 615 PRINTS PR00412 Epoxide hydrolase signature 194 207 2.4E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 S40542_RS06870 a4815c83f4e1414d4c9b57f619185d5d 615 PRINTS PR00412 Epoxide hydrolase signature 375 397 2.4E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 S40542_RS06870 a4815c83f4e1414d4c9b57f619185d5d 615 Pfam PF00561 alpha/beta hydrolase fold 123 230 2.5E-17 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS06870 a4815c83f4e1414d4c9b57f619185d5d 615 SUPERFAMILY SSF53474 95 400 7.3E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02895 d615f3b765d618622aae21343cb03117 310 Gene3D G3DSA:1.10.10.10 11 95 2.4E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02895 d615f3b765d618622aae21343cb03117 310 Gene3D G3DSA:3.40.190.10 99 183 4.7E-14 T 11-11-2016 S40542_RS02895 d615f3b765d618622aae21343cb03117 310 SUPERFAMILY SSF53850 99 303 5.52E-35 T 11-11-2016 S40542_RS02895 d615f3b765d618622aae21343cb03117 310 Pfam PF03466 LysR substrate binding domain 97 298 4.8E-39 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS02895 d615f3b765d618622aae21343cb03117 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 6.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02895 d615f3b765d618622aae21343cb03117 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 6.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02895 d615f3b765d618622aae21343cb03117 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 6.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02895 d615f3b765d618622aae21343cb03117 310 SUPERFAMILY SSF46785 12 95 1.25E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02895 d615f3b765d618622aae21343cb03117 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.2E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS02895 d615f3b765d618622aae21343cb03117 310 Gene3D G3DSA:3.40.190.10 184 268 4.9E-21 T 11-11-2016 S40542_RS08025 8875fb2f01fa78a903931131595245ce 333 Gene3D G3DSA:3.10.310.10 3 153 9.1E-63 T 11-11-2016 S40542_RS08025 8875fb2f01fa78a903931131595245ce 333 Gene3D G3DSA:3.10.310.10 154 319 2.7E-58 T 11-11-2016 S40542_RS08025 8875fb2f01fa78a903931131595245ce 333 PIRSF PIRSF029792 1 333 1.3E-121 T 11-11-2016 IPR008794 Proline racemase family S40542_RS08025 8875fb2f01fa78a903931131595245ce 333 SUPERFAMILY SSF54506 5 330 2.92E-109 T 11-11-2016 S40542_RS08025 8875fb2f01fa78a903931131595245ce 333 Pfam PF05544 Proline racemase 8 331 9.7E-120 T 11-11-2016 IPR008794 Proline racemase family S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.7E-22 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 6.7E-22 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 6.7E-22 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.7E-22 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 6.7E-22 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 PIRSF PIRSF000349 1 193 1.5E-81 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 SUPERFAMILY SSF54719 84 192 2.88E-39 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 81 6.9E-35 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 SUPERFAMILY SSF46609 1 83 2.88E-35 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 190 3.2E-35 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS14760 c4d3bf09a1f50676e79342bfba23be1a 193 Gene3D G3DSA:1.10.287.990 20 82 3.4E-23 T 11-11-2016 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 Gene3D G3DSA:1.25.40.10 65 187 9.0E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SUPERFAMILY SSF48452 149 399 1.82E-31 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SUPERFAMILY SSF55874 545 711 1.44E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 666 3.6E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 652 3.6E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 691 3.6E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00387 601 713 1.3E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SUPERFAMILY SSF48452 64 192 8.35E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 Gene3D G3DSA:1.10.287.130 484 548 2.2E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 Pfam PF13424 Tetratricopeptide repeat 173 244 2.0E-14 T 11-11-2016 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00028 213 246 1.7E-6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00028 133 166 240.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00028 173 206 0.023 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00028 253 286 43.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00028 371 404 40.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00028 94 127 370.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00028 293 326 56.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 Gene3D G3DSA:1.25.40.10 188 409 3.3E-31 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 Pfam PF00512 His Kinase A (phospho-acceptor) domain 492 551 8.4E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SMART SM00388 491 555 3.2E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 Gene3D G3DSA:3.30.565.10 557 713 8.4E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 602 711 4.7E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS17330 2398facfb8b444d6397e1a321afe1b58 715 SUPERFAMILY SSF47384 484 555 5.1E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 4 608 34.324 T 11-11-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 Pfam PF11412 Disulphide bond corrector protein DsbC 36 141 1.1E-26 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 Gene3D G3DSA:2.60.40.1250 34 149 1.4E-37 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 Pfam PF13899 Thioredoxin-like 501 580 6.6E-9 T 11-11-2016 S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 SUPERFAMILY SSF52833 501 606 6.59E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 208 413 4.9E-19 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 SUPERFAMILY SSF74863 36 148 8.76E-36 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 Gene3D G3DSA:3.40.30.10 516 609 3.1E-28 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 ProSitePatterns PS00194 Thioredoxin family active site. 516 534 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 S40542_RS01840 4accfb74d6b29e2eadf13ac693199ad6 611 Gene3D G3DSA:3.40.30.10 456 515 1.5E-4 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 1.2E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 326 350 1.2E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 391 406 1.2E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 44 1.2E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 373 1.2E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 293 314 1.2E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 426 1.2E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 Pfam PF00529 HlyD membrane-fusion protein of T1SS 24 383 8.1E-13 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 Gene3D G3DSA:2.40.50.100 280 312 6.0E-10 T 11-11-2016 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 Gene3D G3DSA:2.40.50.100 54 85 6.0E-10 T 11-11-2016 S40542_RS20450 ae7834a63a833538dbc303ed55437b51 427 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 10 424 5.4E-98 T 11-11-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 Pfam PF02839 Carbohydrate binding domain 437 476 8.1E-7 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 SUPERFAMILY SSF51445 376 417 1.2E-75 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 SUPERFAMILY SSF51445 37 293 1.2E-75 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 Gene3D G3DSA:3.10.50.10 296 376 9.3E-10 T 11-11-2016 IPR029070 Chitinase insertion domain S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 SUPERFAMILY SSF51055 432 484 1.96E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 Pfam PF00704 Glycosyl hydrolases family 18 47 403 7.0E-71 T 11-11-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 Gene3D G3DSA:2.10.10.20 432 479 2.1E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 SUPERFAMILY SSF54556 293 375 4.45E-6 T 11-11-2016 IPR029070 Chitinase insertion domain S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 Gene3D G3DSA:3.20.20.80 380 417 2.8E-85 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 Gene3D G3DSA:3.20.20.80 37 295 2.8E-85 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 SMART SM00495 435 481 4.5E-7 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 ProSitePatterns PS01095 Chitinases family 18 active site. 166 174 - T 11-11-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 S40542_RS11270 afaf1c38d350c1d81ff971d3191a8323 485 SMART SM00636 45 403 1.5E-92 T 11-11-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 SUPERFAMILY SSF69318 1664 1930 9.81E-15 T 11-11-2016 S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 SUPERFAMILY SSF69318 1211 1261 9.81E-15 T 11-11-2016 S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 1380 1433 3.7E-6 T 11-11-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 Gene3D G3DSA:2.140.10.10 881 1037 4.1E-15 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 SUPERFAMILY SSF50998 871 1032 4.06E-11 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 2664 2699 1.5E-4 T 11-11-2016 IPR006530 YD repeat S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 2656 2679 8.0E-4 T 11-11-2016 IPR006530 YD repeat S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 Pfam PF13360 PQQ-like domain 925 1027 4.5E-6 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat S40542_RS07465 26873a8a0c88180e2e2996781a74fa17 3532 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 3130 3199 1.1E-13 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 9 328 30.823 T 11-11-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 SUPERFAMILY SSF46785 10 62 2.16E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 Gene3D G3DSA:3.30.930.10 85 279 1.7E-55 T 11-11-2016 S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 Gene3D G3DSA:1.10.10.10 8 64 5.1E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 93 219 2.7E-15 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 SUPERFAMILY SSF50037 282 328 1.28E-9 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 Gene3D G3DSA:2.30.30.100 282 329 7.5E-18 T 11-11-2016 S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 SUPERFAMILY SSF55681 84 279 3.11E-55 T 11-11-2016 S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 Pfam PF08279 HTH domain 10 61 8.8E-14 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 328 1.1E-60 T 11-11-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS00615 3b9e299a66f94270f14730868aebbd06 331 Pfam PF02237 Biotin protein ligase C terminal domain 284 328 3.9E-7 T 11-11-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS20600 149bf799159b357078173a5fba470821 709 Pfam PF00005 ABC transporter 507 656 2.8E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS20600 149bf799159b357078173a5fba470821 709 Gene3D G3DSA:1.20.1560.10 164 469 7.5E-68 T 11-11-2016 S40542_RS20600 149bf799159b357078173a5fba470821 709 SUPERFAMILY SSF90123 164 465 8.63E-61 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS20600 149bf799159b357078173a5fba470821 709 Pfam PF03412 Peptidase C39 family 20 148 1.1E-34 T 11-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 S40542_RS20600 149bf799159b357078173a5fba470821 709 SUPERFAMILY SSF52540 481 698 3.89E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20600 149bf799159b357078173a5fba470821 709 SMART SM00382 516 700 3.5E-19 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS20600 149bf799159b357078173a5fba470821 709 Gene3D G3DSA:3.90.70.10 26 146 7.2E-24 T 11-11-2016 S40542_RS20600 149bf799159b357078173a5fba470821 709 ProSitePatterns PS00211 ABC transporters family signature. 628 642 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS20600 149bf799159b357078173a5fba470821 709 Pfam PF00664 ABC transporter transmembrane region 175 442 6.3E-40 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS20600 149bf799159b357078173a5fba470821 709 Gene3D G3DSA:3.40.50.300 489 698 1.2E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.5E-95 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 Gene3D G3DSA:1.10.560.10 372 519 2.5E-41 T 11-11-2016 IPR027413 GroEL-like equatorial domain S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 Hamap MF_00600 60 kDa chaperonin [groL]. 2 548 41.48 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 Gene3D G3DSA:1.10.560.10 4 197 1.3E-46 T 11-11-2016 IPR027413 GroEL-like equatorial domain S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 SUPERFAMILY SSF52029 185 377 1.59E-83 T 11-11-2016 IPR027409 GroEL-like apical domain S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 SUPERFAMILY SSF54849 137 204 7.55E-23 T 11-11-2016 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 PRINTS PR00298 60kDa chaperonin signature 351 376 8.2E-75 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 PRINTS PR00298 60kDa chaperonin signature 269 292 8.2E-75 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 PRINTS PR00298 60kDa chaperonin signature 399 420 8.2E-75 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 SUPERFAMILY SSF48592 8 134 5.8E-77 T 11-11-2016 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 SUPERFAMILY SSF48592 407 522 5.8E-77 T 11-11-2016 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 Gene3D G3DSA:3.50.7.10 198 371 1.1E-93 T 11-11-2016 IPR027409 GroEL-like apical domain S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 ProSitePatterns PS00296 Chaperonins cpn60 signature. 406 417 - T 11-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 S40542_RS01860 111d63704a2dbc01075768a97aca4c51 549 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.4E-254 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS18405 75c8778e8527ef910b0000ce40f4ce74 147 SMART SM00347 31 131 1.3E-20 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 S40542_RS18405 75c8778e8527ef910b0000ce40f4ce74 147 SUPERFAMILY SSF46785 9 139 3.14E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18405 75c8778e8527ef910b0000ce40f4ce74 147 Gene3D G3DSA:1.10.10.10 3 139 1.4E-43 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18405 75c8778e8527ef910b0000ce40f4ce74 147 Pfam PF01047 MarR family 38 95 3.1E-16 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.2E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.2E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.2E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 Gene3D G3DSA:3.40.190.10 172 279 1.5E-21 T 11-11-2016 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 Gene3D G3DSA:1.10.10.10 2 86 1.8E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14510 604157e1759d8e1a320eff0086674756 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.9E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 Pfam PF03466 LysR substrate binding domain 94 306 1.3E-15 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS14510 604157e1759d8e1a320eff0086674756 312 SUPERFAMILY SSF53850 90 307 5.43E-38 T 11-11-2016 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 Gene3D G3DSA:3.40.190.10 90 171 1.5E-29 T 11-11-2016 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 Gene3D G3DSA:3.40.190.10 283 310 1.5E-29 T 11-11-2016 S40542_RS14510 604157e1759d8e1a320eff0086674756 312 SUPERFAMILY SSF46785 3 84 6.35E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17290 db50e0413e248c0fa01b3fe6fc64525c 105 Gene3D G3DSA:3.20.20.210 2 97 3.1E-15 T 11-11-2016 S40542_RS17290 db50e0413e248c0fa01b3fe6fc64525c 105 SUPERFAMILY SSF51726 2 103 2.88E-12 T 11-11-2016 S40542_RS17290 db50e0413e248c0fa01b3fe6fc64525c 105 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 3 79 2.2E-9 T 11-11-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 SMART SM00387 691 806 1.1E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 SUPERFAMILY SSF55785 393 505 1.61E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 Pfam PF08447 PAS fold 413 491 1.5E-10 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 696 803 1.9E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 SUPERFAMILY SSF55874 648 804 3.41E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 Gene3D G3DSA:3.30.450.20 207 336 5.0E-7 T 11-11-2016 S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 Gene3D G3DSA:3.30.450.20 549 580 4.9E-14 T 11-11-2016 S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 Gene3D G3DSA:3.30.450.20 390 509 4.9E-14 T 11-11-2016 S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 Gene3D G3DSA:3.30.565.10 654 806 1.2E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03930 324172f0b27d65bdacafabec451a18fd 810 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 389 510 9.1E-7 T 11-11-2016 IPR000014 PAS domain S40542_RS01065 c5b24028917bc2b17b2474f62e13be39 152 Gene3D G3DSA:2.60.120.10 12 149 7.6E-21 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS01065 c5b24028917bc2b17b2474f62e13be39 152 SUPERFAMILY SSF51206 14 149 4.71E-20 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS01065 c5b24028917bc2b17b2474f62e13be39 152 SMART SM00100 24 137 4.5E-4 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS01065 c5b24028917bc2b17b2474f62e13be39 152 Pfam PF00027 Cyclic nucleotide-binding domain 45 121 1.5E-13 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 SUPERFAMILY SSF52540 4 170 2.33E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 Gene3D G3DSA:3.40.50.300 2 170 3.0E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 Pfam PF01202 Shikimate kinase 13 170 3.3E-55 T 11-11-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 11-11-2016 S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 11-11-2016 S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 11-11-2016 S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 11-11-2016 S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 11-11-2016 S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-11-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 S40542_RS01375 f94a661d0a9d389f4e9e672f71e1ef4a 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 28.521 T 11-11-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 S40542_RS00330 7ec241221f3c1896dd1b8f6393104367 129 Pfam PF04304 Protein of unknown function (DUF454) 11 121 1.7E-32 T 11-11-2016 IPR007401 Protein of unknown function DUF454 S40542_RS00330 7ec241221f3c1896dd1b8f6393104367 129 PIRSF PIRSF016789 7 128 2.8E-30 T 11-11-2016 IPR007401 Protein of unknown function DUF454 S40542_RS11455 5f3e1b455b47cd166a8d83ce2f6f1ff7 325 Gene3D G3DSA:3.40.50.720 1 138 4.5E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11455 5f3e1b455b47cd166a8d83ce2f6f1ff7 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 325 3.5E-30 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 S40542_RS11455 5f3e1b455b47cd166a8d83ce2f6f1ff7 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site S40542_RS11455 5f3e1b455b47cd166a8d83ce2f6f1ff7 325 Gene3D G3DSA:3.40.50.720 139 302 1.2E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11455 5f3e1b455b47cd166a8d83ce2f6f1ff7 325 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site S40542_RS11455 5f3e1b455b47cd166a8d83ce2f6f1ff7 325 SUPERFAMILY SSF51735 103 295 8.86E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11455 5f3e1b455b47cd166a8d83ce2f6f1ff7 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 294 1.8E-51 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 S40542_RS11455 5f3e1b455b47cd166a8d83ce2f6f1ff7 325 SUPERFAMILY SSF52283 2 136 2.46E-39 T 11-11-2016 S40542_RS14235 a347b22c1afe6ad607dd4d6b5757c610 474 Pfam PF00209 Sodium:neurotransmitter symporter family 5 124 5.1E-23 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS14235 a347b22c1afe6ad607dd4d6b5757c610 474 Pfam PF00209 Sodium:neurotransmitter symporter family 146 463 7.6E-24 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS14235 a347b22c1afe6ad607dd4d6b5757c610 474 SUPERFAMILY SSF161070 5 464 1.44E-112 T 11-11-2016 S40542_RS14235 a347b22c1afe6ad607dd4d6b5757c610 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 1.4E-7 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS14235 a347b22c1afe6ad607dd4d6b5757c610 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.4E-7 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS14235 a347b22c1afe6ad607dd4d6b5757c610 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 1.4E-7 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS14235 a347b22c1afe6ad607dd4d6b5757c610 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 443 463 1.4E-7 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 446 481 1.8E-4 T 11-11-2016 IPR006530 YD repeat S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 344 382 2.3E-5 T 11-11-2016 IPR006530 YD repeat S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 386 420 8.4E-5 T 11-11-2016 IPR006530 YD repeat S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 691 725 4.5E-4 T 11-11-2016 IPR006530 YD repeat S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 302 342 1.0E-4 T 11-11-2016 IPR006530 YD repeat S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 PRINTS PR00394 RHS protein signature 771 791 4.9E-11 T 11-11-2016 IPR001826 RHS protein S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 PRINTS PR00394 RHS protein signature 846 865 4.9E-11 T 11-11-2016 IPR001826 RHS protein S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 PRINTS PR00394 RHS protein signature 823 843 4.9E-11 T 11-11-2016 IPR001826 RHS protein S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 Pfam PF05593 RHS Repeat 302 338 3.6E-6 T 11-11-2016 IPR031325 RHS repeat S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 Pfam PF05593 RHS Repeat 387 417 7.2E-7 T 11-11-2016 IPR031325 RHS repeat S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 Pfam PF05593 RHS Repeat 113 151 8.4E-6 T 11-11-2016 IPR031325 RHS repeat S40542_RS07490 cdcd37244ff1eab125a468dbceaca10e 1038 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 806 879 2.3E-21 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 37.949 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 Pfam PF00164 Ribosomal protein S12/S23 4 123 1.4E-42 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 PIRSF PIRSF002133 1 124 2.8E-53 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.5E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.5E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.5E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.5E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.5E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.5E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 SUPERFAMILY SSF50249 3 123 4.28E-50 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 9.4E-69 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS19525 3656c3dd4ad49f98b85845162f6e3dad 124 Gene3D G3DSA:2.40.50.140 1 123 8.1E-64 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS14725 154fff5239c44f093ac060164b7f7242 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.058 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 S40542_RS14725 154fff5239c44f093ac060164b7f7242 294 Pfam PF01513 ATP-NAD kinase 7 273 2.3E-62 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 S40542_RS14725 154fff5239c44f093ac060164b7f7242 294 SUPERFAMILY SSF111331 7 292 7.98E-88 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain S40542_RS14725 154fff5239c44f093ac060164b7f7242 294 Gene3D G3DSA:2.60.200.30 153 263 1.0E-38 T 11-11-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 S40542_RS14725 154fff5239c44f093ac060164b7f7242 294 Gene3D G3DSA:3.40.50.10330 4 152 1.6E-36 T 11-11-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 S40542_RS18890 6a753dea6813824d1e32f0d1ace75a97 194 Pfam PF13580 SIS domain 9 143 1.2E-23 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 S40542_RS18890 6a753dea6813824d1e32f0d1ace75a97 194 Gene3D G3DSA:3.40.50.10490 1 190 1.3E-38 T 11-11-2016 S40542_RS18890 6a753dea6813824d1e32f0d1ace75a97 194 SUPERFAMILY SSF53697 1 190 7.69E-39 T 11-11-2016 S40542_RS01165 3a399ea0fe92218bfe5af7d42ee307c9 808 SUPERFAMILY SSF69593 284 491 4.45E-25 T 11-11-2016 S40542_RS01165 3a399ea0fe92218bfe5af7d42ee307c9 808 PIRSF PIRSF000437 19 808 2.2E-251 T 11-11-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 S40542_RS01165 3a399ea0fe92218bfe5af7d42ee307c9 808 PIRSF PIRSF500064 3 808 2.1E-261 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 S40542_RS01165 3a399ea0fe92218bfe5af7d42ee307c9 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 808 25.842 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 S40542_RS01165 3a399ea0fe92218bfe5af7d42ee307c9 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 14 804 0.0 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 S40542_RS01165 3a399ea0fe92218bfe5af7d42ee307c9 808 SMART SM00563 303 430 5.2E-24 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS01165 3a399ea0fe92218bfe5af7d42ee307c9 808 Pfam PF01553 Acyltransferase 285 427 3.0E-22 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS01835 9902c68b39ea44db89a2c97ec39db0e5 153 SUPERFAMILY SSF52304 6 150 2.35E-61 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 S40542_RS01835 9902c68b39ea44db89a2c97ec39db0e5 153 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 153 69.035 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 S40542_RS01835 9902c68b39ea44db89a2c97ec39db0e5 153 Gene3D G3DSA:3.40.50.9100 6 147 3.8E-65 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 S40542_RS01835 9902c68b39ea44db89a2c97ec39db0e5 153 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 8 153 1.0E-56 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 S40542_RS01835 9902c68b39ea44db89a2c97ec39db0e5 153 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 6.4E-63 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 S40542_RS01835 9902c68b39ea44db89a2c97ec39db0e5 153 PIRSF PIRSF001399 3 149 3.0E-60 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 S40542_RS01835 9902c68b39ea44db89a2c97ec39db0e5 153 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 11-11-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 S40542_RS01835 9902c68b39ea44db89a2c97ec39db0e5 153 Pfam PF01220 Dehydroquinase class II 6 142 5.8E-58 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 S40542_RS19420 2a02a351ed82d95a99eac3a27cfca32a 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 1.3E-127 T 11-11-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 S40542_RS19420 2a02a351ed82d95a99eac3a27cfca32a 324 Gene3D G3DSA:3.30.930.10 12 319 1.0E-70 T 11-11-2016 S40542_RS19420 2a02a351ed82d95a99eac3a27cfca32a 324 SUPERFAMILY SSF55681 11 319 1.97E-79 T 11-11-2016 S40542_RS19420 2a02a351ed82d95a99eac3a27cfca32a 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 319 1.9E-45 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 20 39 1.3E-29 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 1.3E-29 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 189 207 1.3E-29 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 289 1.3E-29 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 302 324 1.3E-29 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 288 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 19 41 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 52 67 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 317 324 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 443 463 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 189 214 8.0E-52 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 PIRSF PIRSF000350 2 474 2.2E-74 T 11-11-2016 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 Gene3D G3DSA:3.50.50.60 157 346 1.1E-53 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 SUPERFAMILY SSF51905 17 330 2.49E-56 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 SUPERFAMILY SSF55424 356 474 2.06E-29 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 13 477 64.774 T 11-11-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 Gene3D G3DSA:3.50.50.60 17 156 2.7E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 Gene3D G3DSA:3.30.390.30 356 471 7.2E-32 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 468 6.2E-29 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 S40542_RS19915 8e2e90af4ac9f975f3f129ea74f28c40 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 18 337 1.6E-61 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02445 aeded7f1247ca44ec1a7839f06e5dce8 368 SUPERFAMILY SSF81891 120 362 4.45E-36 T 11-11-2016 S40542_RS02445 aeded7f1247ca44ec1a7839f06e5dce8 368 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 208 1.4E-7 T 11-11-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 S40542_RS02445 aeded7f1247ca44ec1a7839f06e5dce8 368 Gene3D G3DSA:1.10.3090.10 122 306 2.6E-32 T 11-11-2016 S40542_RS02445 aeded7f1247ca44ec1a7839f06e5dce8 368 Pfam PF01743 Poly A polymerase head domain 3 122 1.4E-16 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 S40542_RS02445 aeded7f1247ca44ec1a7839f06e5dce8 368 SUPERFAMILY SSF81301 1 119 9.81E-28 T 11-11-2016 S40542_RS02445 aeded7f1247ca44ec1a7839f06e5dce8 368 Gene3D G3DSA:3.30.460.10 1 121 8.7E-27 T 11-11-2016 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 SUPERFAMILY SSF50447 242 325 1.3E-20 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 SUPERFAMILY SSF52540 19 232 9.06E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 Gene3D G3DSA:2.40.30.10 242 341 5.0E-17 T 11-11-2016 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 5.4E-186 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 210 1.0E-13 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 Gene3D G3DSA:2.40.30.10 342 432 4.8E-6 T 11-11-2016 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 SUPERFAMILY SSF50465 329 430 2.88E-31 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 PRINTS PR00315 GTP-binding elongation factor signature 123 134 2.9E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 PRINTS PR00315 GTP-binding elongation factor signature 87 95 2.9E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 PRINTS PR00315 GTP-binding elongation factor signature 26 39 2.9E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 PRINTS PR00315 GTP-binding elongation factor signature 160 169 2.9E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 PRINTS PR00315 GTP-binding elongation factor signature 107 117 2.9E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 Gene3D G3DSA:3.40.50.300 15 229 1.2E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 471 49.892 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 S40542_RS19590 4f0e5aaf457ad01b6090fe8389c10b13 471 Pfam PF00009 Elongation factor Tu GTP binding domain 24 210 2.5E-44 T 11-11-2016 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 Gene3D G3DSA:3.40.1190.10 107 324 4.9E-79 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 SUPERFAMILY SSF53244 322 468 8.24E-46 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 Pfam PF08245 Mur ligase middle domain 123 303 7.4E-29 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 SUPERFAMILY SSF51984 20 105 4.19E-28 T 11-11-2016 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 Gene3D G3DSA:3.40.50.720 20 106 8.9E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18735 6813f370e046b9662b014479a97364c7 483 Pfam PF01225 Mur ligase family, catalytic domain 20 117 1.6E-28 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 412 4.2E-19 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 468 4.4E-172 T 11-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 18 474 41.827 T 11-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 SUPERFAMILY SSF53623 104 320 3.89E-71 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18735 6813f370e046b9662b014479a97364c7 483 Gene3D G3DSA:3.90.190.20 325 470 6.0E-54 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS09620 b6795a783256a79dc42c5f7612573629 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 16 424 4.9E-179 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 S40542_RS09620 b6795a783256a79dc42c5f7612573629 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 S40542_RS09620 b6795a783256a79dc42c5f7612573629 429 Gene3D G3DSA:3.90.1150.10 336 426 8.2E-49 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS09620 b6795a783256a79dc42c5f7612573629 429 Gene3D G3DSA:3.90.1150.10 9 64 8.2E-49 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS09620 b6795a783256a79dc42c5f7612573629 429 Pfam PF00202 Aminotransferase class-III 30 424 1.4E-125 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 S40542_RS09620 b6795a783256a79dc42c5f7612573629 429 Gene3D G3DSA:3.40.640.10 65 333 3.6E-91 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS09620 b6795a783256a79dc42c5f7612573629 429 SUPERFAMILY SSF53383 10 426 4.81E-123 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS09620 b6795a783256a79dc42c5f7612573629 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 4 427 47.565 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 4 387 5.0E-220 T 11-11-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 11-11-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 11-11-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 SUPERFAMILY SSF53901 1 257 1.18E-79 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 9.5E-143 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 PIRSF PIRSF000429 1 388 2.2E-134 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 11-11-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 Gene3D G3DSA:3.40.47.10 268 386 4.3E-60 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 Gene3D G3DSA:3.40.47.10 143 183 4.3E-60 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 Pfam PF02803 Thiolase, C-terminal domain 262 386 3.6E-49 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 SUPERFAMILY SSF53901 263 386 8.42E-44 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 Gene3D G3DSA:3.40.47.10 184 267 3.0E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 Gene3D G3DSA:3.40.47.10 4 126 3.0E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 Pfam PF00108 Thiolase, N-terminal domain 5 254 2.2E-82 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 S40542_RS00045 4084d6068326107126f9c5ba7e405079 388 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.209 T 11-11-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 S40542_RS20550 c1a270409cc50f1ea25e092125503899 249 Pfam PF04397 LytTr DNA-binding domain 151 245 1.4E-21 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS20550 c1a270409cc50f1ea25e092125503899 249 SMART SM00850 149 246 1.8E-27 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS20550 c1a270409cc50f1ea25e092125503899 249 Gene3D G3DSA:2.40.50.40 141 208 1.1E-18 T 11-11-2016 S40542_RS00445 a70e222ebea78f957a873376e4cce950 469 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 307 466 2.7E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00445 a70e222ebea78f957a873376e4cce950 469 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 462 2.3E-44 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00445 a70e222ebea78f957a873376e4cce950 469 Gene3D G3DSA:3.30.70.270 313 467 2.5E-51 T 11-11-2016 S40542_RS00445 a70e222ebea78f957a873376e4cce950 469 SUPERFAMILY SSF55073 316 465 3.06E-45 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS00445 a70e222ebea78f957a873376e4cce950 469 Gene3D G3DSA:3.30.450.20 153 265 2.0E-7 T 11-11-2016 S40542_RS00445 a70e222ebea78f957a873376e4cce950 469 SMART SM00267 300 466 1.4E-49 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00445 a70e222ebea78f957a873376e4cce950 469 Pfam PF02743 Cache domain 65 264 3.6E-15 T 11-11-2016 IPR033479 Double Cache domain 1 S40542_RS05240 bb9cd086245ac4bef0bea65ee1cc3c56 208 Pfam PF00925 GTP cyclohydrolase II 19 171 3.1E-55 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 S40542_RS05240 bb9cd086245ac4bef0bea65ee1cc3c56 208 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 201 35.551 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 S40542_RS05240 bb9cd086245ac4bef0bea65ee1cc3c56 208 SUPERFAMILY SSF142695 18 171 7.45E-53 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.9E-40 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 SMART SM00864 13 205 2.0E-106 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 SMART SM00865 207 325 6.5E-54 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 Gene3D G3DSA:3.30.1330.20 215 320 2.2E-45 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 SUPERFAMILY SSF52490 14 205 6.41E-66 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-11-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.1E-48 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.1E-48 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.1E-48 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.1E-48 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-11-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 320 2.0E-129 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 Pfam PF12327 FtsZ family, C-terminal domain 222 316 5.6E-35 T 11-11-2016 IPR024757 Cell division protein FtsZ, C-terminal S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 SUPERFAMILY SSF55307 205 319 6.87E-41 T 11-11-2016 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 Gene3D G3DSA:3.40.50.1440 14 214 6.1E-90 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 S40542_RS18715 6b886a385228ac43b540a5fdef6ce4b3 418 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 399 37.041 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 S40542_RS14020 f3fe9248941fcb6f089ffef214267b30 419 Pfam PF00817 impB/mucB/samB family 5 151 7.4E-31 T 11-11-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 S40542_RS14020 f3fe9248941fcb6f089ffef214267b30 419 Gene3D G3DSA:3.30.1490.100 251 352 8.1E-4 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 S40542_RS14020 f3fe9248941fcb6f089ffef214267b30 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 350 1.6E-8 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 S40542_RS14020 f3fe9248941fcb6f089ffef214267b30 419 SUPERFAMILY SSF56672 1 237 3.65E-63 T 11-11-2016 S40542_RS14020 f3fe9248941fcb6f089ffef214267b30 419 Gene3D G3DSA:1.10.150.20 170 235 9.3E-18 T 11-11-2016 S40542_RS14020 f3fe9248941fcb6f089ffef214267b30 419 Pfam PF13438 Domain of unknown function (DUF4113) 367 414 5.5E-19 T 11-11-2016 IPR025188 Domain of unknown function DUF4113 S40542_RS14020 f3fe9248941fcb6f089ffef214267b30 419 Gene3D G3DSA:3.30.70.270 66 158 5.5E-18 T 11-11-2016 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 Gene3D G3DSA:1.25.40.10 733 811 1.9E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 Gene3D G3DSA:1.25.40.10 656 732 1.1E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 Pfam PF00069 Protein kinase domain 15 265 1.5E-53 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 SUPERFAMILY SSF56112 14 266 2.97E-69 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS14580 13c4ef4f1022dd824505050850260471 859 Pfam PF13432 Tetratricopeptide repeat 687 741 2.6E-4 T 11-11-2016 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 SUPERFAMILY SSF48452 731 813 1.71E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 Gene3D G3DSA:1.25.40.10 499 655 1.3E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 Gene3D G3DSA:3.30.200.20 14 78 2.0E-19 T 11-11-2016 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 Gene3D G3DSA:1.10.510.10 79 265 7.0E-50 T 11-11-2016 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 SMART SM00028 581 614 0.054 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 SMART SM00028 751 784 190.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 SMART SM00028 681 714 0.059 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 SUPERFAMILY SSF48452 580 741 1.9E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14580 13c4ef4f1022dd824505050850260471 859 SMART SM00220 12 275 1.0E-60 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 S40542_RS02380 fd37c97ef849ae7c99abbc660d1c21fb 245 Pfam PF00975 Thioesterase domain 18 240 1.7E-40 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 S40542_RS02380 fd37c97ef849ae7c99abbc660d1c21fb 245 SUPERFAMILY SSF53474 7 242 5.71E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02380 fd37c97ef849ae7c99abbc660d1c21fb 245 Gene3D G3DSA:3.40.50.1820 10 123 7.2E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02380 fd37c97ef849ae7c99abbc660d1c21fb 245 Gene3D G3DSA:3.40.50.1820 176 242 7.2E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 SUPERFAMILY SSF50156 240 347 1.05E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 Pfam PF13365 Trypsin-like peptidase domain 82 216 3.5E-30 T 11-11-2016 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 SMART SM00228 257 340 4.6E-5 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 Gene3D G3DSA:2.40.10.10 42 146 1.2E-29 T 11-11-2016 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.6E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 9.6E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 9.6E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 9.6E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 9.6E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 PRINTS PR00834 HtrA/DegQ protease family signature 298 310 9.6E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 Gene3D G3DSA:2.30.42.10 259 353 7.8E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 SUPERFAMILY SSF50494 45 254 1.2E-55 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 Gene3D G3DSA:2.40.10.10 148 258 5.4E-37 T 11-11-2016 S40542_RS18960 ff6e8167a12d6de4b8eeb39bf6d32fb0 357 Pfam PF13180 PDZ domain 268 349 5.8E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS13220 e316082e96a385c3329b589e0ffd9c85 186 Pfam PF05076 Suppressor of fused protein (SUFU) 38 182 4.2E-14 T 11-11-2016 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 S40542_RS14310 5758d4982a192867a0c0f7df10eb0846 108 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 54 3.0E-8 T 11-11-2016 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 Gene3D G3DSA:3.40.1410.10 87 223 2.3E-44 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 Gene3D G3DSA:1.10.10.10 3 76 1.9E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 SMART SM00866 90 227 5.8E-31 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 SUPERFAMILY SSF64288 57 232 6.6E-39 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 SUPERFAMILY SSF46785 3 73 2.33E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 Pfam PF07702 UTRA domain 91 227 8.9E-31 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 233 6.3E-91 T 11-11-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.3E-8 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.3E-8 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 SMART SM00345 10 69 3.1E-21 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 48 66 9.6E-5 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 34 48 9.6E-5 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS01255 21149e1f9c664332dda1e4bd8e68fc9f 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 1.2E-18 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS16255 77bf7f4750d00d1e0b191cc2f3fd97d2 345 SMART SM00267 165 333 1.4E-53 T 11-11-2016 IPR000160 GGDEF domain S40542_RS16255 77bf7f4750d00d1e0b191cc2f3fd97d2 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 173 331 1.1E-45 T 11-11-2016 IPR000160 GGDEF domain S40542_RS16255 77bf7f4750d00d1e0b191cc2f3fd97d2 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 329 9.6E-42 T 11-11-2016 IPR000160 GGDEF domain S40542_RS16255 77bf7f4750d00d1e0b191cc2f3fd97d2 345 Gene3D G3DSA:3.30.70.270 178 335 5.1E-48 T 11-11-2016 S40542_RS16255 77bf7f4750d00d1e0b191cc2f3fd97d2 345 SUPERFAMILY SSF55073 181 334 1.1E-43 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS18145 88aebd62b6a11c27ed10a0819a4c78ae 619 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 619 48.211 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 S40542_RS18145 88aebd62b6a11c27ed10a0819a4c78ae 619 Pfam PF13721 SecD export protein N-terminal TM region 2 102 2.1E-34 T 11-11-2016 IPR027398 SecD export protein N-terminal TM domain S40542_RS18145 88aebd62b6a11c27ed10a0819a4c78ae 619 SUPERFAMILY SSF82866 414 609 5.62E-43 T 11-11-2016 S40542_RS18145 88aebd62b6a11c27ed10a0819a4c78ae 619 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 7.2E-145 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 S40542_RS18145 88aebd62b6a11c27ed10a0819a4c78ae 619 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 598 1.5E-78 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial S40542_RS18145 88aebd62b6a11c27ed10a0819a4c78ae 619 Pfam PF07549 SecD/SecF GG Motif 116 140 6.6E-7 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site S40542_RS18145 88aebd62b6a11c27ed10a0819a4c78ae 619 Gene3D G3DSA:1.20.1640.10 446 608 3.5E-24 T 11-11-2016 S40542_RS18145 88aebd62b6a11c27ed10a0819a4c78ae 619 Pfam PF02355 Protein export membrane protein 437 598 1.3E-17 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial S40542_RS20475 7501ae1bdb60b4b8d90526fe1153c65a 82 Gene3D G3DSA:1.10.260.40 4 62 2.7E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS20475 7501ae1bdb60b4b8d90526fe1153c65a 82 SUPERFAMILY SSF47413 4 65 7.51E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS20475 7501ae1bdb60b4b8d90526fe1153c65a 82 Pfam PF01381 Helix-turn-helix 7 59 6.6E-14 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS20475 7501ae1bdb60b4b8d90526fe1153c65a 82 SMART SM00530 6 61 5.1E-9 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 PIRSF PIRSF000774 1 503 1.4E-152 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 Pfam PF04963 Sigma-54 factor, core binding domain 136 329 2.2E-58 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 481 488 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 500 7.1E-152 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 PRINTS PR00045 Sigma-54 factor signature 212 229 1.6E-31 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 PRINTS PR00045 Sigma-54 factor signature 476 494 1.6E-31 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 PRINTS PR00045 Sigma-54 factor signature 402 414 1.6E-31 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 PRINTS PR00045 Sigma-54 factor signature 418 429 1.6E-31 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 2.1E-17 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 390 409 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 S40542_RS19030 25a9d8d7aa9d9ef7c41f461b1c6f44a0 503 Pfam PF04552 Sigma-54, DNA binding domain 343 500 7.8E-72 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 SUPERFAMILY SSF55681 420 583 4.58E-101 T 11-11-2016 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 SUPERFAMILY SSF55681 108 287 4.58E-101 T 11-11-2016 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 SUPERFAMILY SSF50249 1 105 6.67E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 SUPERFAMILY SSF55261 288 418 2.62E-46 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.1E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 9.8E-16 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 Gene3D G3DSA:3.30.930.10 133 275 1.8E-111 T 11-11-2016 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 Gene3D G3DSA:3.30.930.10 415 584 1.8E-111 T 11-11-2016 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 Gene3D G3DSA:3.30.1360.30 276 414 2.4E-47 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 2.7E-106 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 Gene3D G3DSA:2.40.50.140 1 106 2.4E-38 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.742 T 11-11-2016 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 Pfam PF02938 GAD domain 311 406 5.6E-33 T 11-11-2016 IPR029351 GAD domain Reactome: R-HSA-379726 S40542_RS14695 19d10f060daed6583d254eb5411b2542 593 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.6E-264 T 11-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 S40542_RS20155 e1cba8ac423093d4fafb9819dd7e673c 233 SUPERFAMILY SSF56784 9 231 2.03E-37 T 11-11-2016 IPR023214 HAD-like domain S40542_RS20155 e1cba8ac423093d4fafb9819dd7e673c 233 Gene3D G3DSA:3.40.50.1000 9 229 2.6E-31 T 11-11-2016 IPR023214 HAD-like domain S40542_RS20155 e1cba8ac423093d4fafb9819dd7e673c 233 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 84 200 2.4E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS20155 e1cba8ac423093d4fafb9819dd7e673c 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 205 6.5E-17 T 11-11-2016 IPR023214 HAD-like domain S40542_RS24620 a2bdada35a7560b3e87f5514667ac414 89 SUPERFAMILY SSF54826 14 89 4.88E-13 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS24620 a2bdada35a7560b3e87f5514667ac414 89 Gene3D G3DSA:3.30.390.10 14 89 9.5E-17 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS24620 a2bdada35a7560b3e87f5514667ac414 89 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 88 1.3E-5 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain S40542_RS19520 8fafe679366a5ca06edafdf6155f97f0 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.385 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 S40542_RS19520 8fafe679366a5ca06edafdf6155f97f0 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.0E-65 T 11-11-2016 IPR023798 Ribosomal protein S7 domain S40542_RS19520 8fafe679366a5ca06edafdf6155f97f0 156 Gene3D G3DSA:1.10.455.10 8 156 4.2E-66 T 11-11-2016 IPR023798 Ribosomal protein S7 domain S40542_RS19520 8fafe679366a5ca06edafdf6155f97f0 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.5E-69 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 S40542_RS19520 8fafe679366a5ca06edafdf6155f97f0 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-11-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS19520 8fafe679366a5ca06edafdf6155f97f0 156 PIRSF PIRSF002122 3 156 1.5E-61 T 11-11-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 S40542_RS19520 8fafe679366a5ca06edafdf6155f97f0 156 SUPERFAMILY SSF47973 6 149 5.49E-59 T 11-11-2016 IPR023798 Ribosomal protein S7 domain S40542_RS16665 5158ed0da2f32f2d59b409a5230cc4e1 142 Pfam PF05130 FlgN protein 6 128 1.6E-15 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 S40542_RS16665 5158ed0da2f32f2d59b409a5230cc4e1 142 Gene3D G3DSA:1.20.58.300 9 114 3.2E-11 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 S40542_RS16665 5158ed0da2f32f2d59b409a5230cc4e1 142 SUPERFAMILY SSF140566 9 114 1.83E-15 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 S40542_RS13510 d1f72c322786468211ad1e743da47013 162 Pfam PF13508 Acetyltransferase (GNAT) domain 56 138 1.2E-14 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS13510 d1f72c322786468211ad1e743da47013 162 Gene3D G3DSA:3.40.630.30 2 157 9.3E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13510 d1f72c322786468211ad1e743da47013 162 SUPERFAMILY SSF55729 1 147 2.62E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 TIGRFAM TIGR00191 thrB: homoserine kinase 4 306 1.7E-76 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 26.808 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 PIRSF PIRSF000676 1 307 3.4E-67 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 Gene3D G3DSA:3.30.230.10 3 157 7.7E-40 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 Gene3D G3DSA:3.30.70.890 169 294 2.8E-30 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 PRINTS PR00958 Homoserine kinase signature 98 113 4.4E-28 T 11-11-2016 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 PRINTS PR00958 Homoserine kinase signature 9 24 4.4E-28 T 11-11-2016 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 PRINTS PR00958 Homoserine kinase signature 176 193 4.4E-28 T 11-11-2016 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 PRINTS PR00958 Homoserine kinase signature 255 270 4.4E-28 T 11-11-2016 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 PRINTS PR00958 Homoserine kinase signature 138 151 4.4E-28 T 11-11-2016 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 Pfam PF00288 GHMP kinases N terminal domain 86 151 2.0E-12 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 Pfam PF08544 GHMP kinases C terminal 216 282 4.6E-6 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 91 102 - T 11-11-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 SUPERFAMILY SSF55060 172 290 2.59E-21 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain S40542_RS05450 165e9e7de8ea1721f0a752a892142e02 309 SUPERFAMILY SSF54211 1 186 1.21E-25 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.0E-73 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 SUPERFAMILY SSF47917 383 511 2.17E-45 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 SUPERFAMILY SSF50615 10 94 2.16E-25 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 SUPERFAMILY SSF52540 96 381 2.15E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 6.4E-13 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.933 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 Gene3D G3DSA:2.40.30.20 1 93 1.2E-29 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 Gene3D G3DSA:3.40.50.300 94 382 1.8E-112 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 Gene3D G3DSA:1.20.150.20 383 510 2.4E-46 T 11-11-2016 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 8.3E-44 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.1E-253 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 S40542_RS20705 08e08500e5aad9c37c05d7dc1ad903aa 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS16320 5bce61827440d631fc3018de37203cf6 615 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 577 1.5E-45 T 11-11-2016 IPR000160 GGDEF domain S40542_RS16320 5bce61827440d631fc3018de37203cf6 615 SUPERFAMILY SSF48452 73 213 1.42E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS16320 5bce61827440d631fc3018de37203cf6 615 SMART SM00267 402 582 2.8E-55 T 11-11-2016 IPR000160 GGDEF domain S40542_RS16320 5bce61827440d631fc3018de37203cf6 615 Gene3D G3DSA:3.30.70.270 415 581 4.2E-51 T 11-11-2016 S40542_RS16320 5bce61827440d631fc3018de37203cf6 615 SUPERFAMILY SSF55073 418 580 4.0E-44 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS16320 5bce61827440d631fc3018de37203cf6 615 SUPERFAMILY SSF48452 163 349 4.51E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS16320 5bce61827440d631fc3018de37203cf6 615 Gene3D G3DSA:1.25.40.10 28 334 3.8E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS16320 5bce61827440d631fc3018de37203cf6 615 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 409 579 4.6E-45 T 11-11-2016 IPR000160 GGDEF domain S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.7E-36 T 11-11-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 Gene3D G3DSA:2.40.50.140 6 81 1.6E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.8E-12 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.8E-12 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.8E-12 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 SUPERFAMILY SSF50249 5 83 1.5E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 7.0E-31 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 Pfam PF00366 Ribosomal protein S17 10 76 1.3E-31 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01220 b35ca8505803e8bf792c24f0701bf6df 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 24.881 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS07000 e966711d5c0f7c804ab97ca893d3ff17 146 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-11-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 S40542_RS07000 e966711d5c0f7c804ab97ca893d3ff17 146 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 129 4.2E-38 T 11-11-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 S40542_RS07000 e966711d5c0f7c804ab97ca893d3ff17 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 3.6E-16 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS07000 e966711d5c0f7c804ab97ca893d3ff17 146 Gene3D G3DSA:3.10.180.10 2 131 5.2E-39 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS07000 e966711d5c0f7c804ab97ca893d3ff17 146 SUPERFAMILY SSF54593 2 128 7.25E-32 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 11-11-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 SUPERFAMILY SSF46785 7 64 4.55E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 SUPERFAMILY SSF100950 79 233 1.67E-30 T 11-11-2016 S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 Gene3D G3DSA:3.40.50.1360 79 222 2.3E-15 T 11-11-2016 S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 8.3E-16 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 SMART SM00420 9 61 1.6E-15 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 5.1E-6 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 5.1E-6 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 Gene3D G3DSA:1.10.10.10 4 54 1.2E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 Pfam PF00455 DeoR C terminal sensor domain 78 233 1.7E-43 T 11-11-2016 IPR014036 DeoR C-terminal sensor domain S40542_RS20515 69b5a567d0a253b774cf26b65df33e32 258 SMART SM01134 73 234 8.1E-58 T 11-11-2016 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 SUPERFAMILY SSF53067 156 393 1.3E-86 T 11-11-2016 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 178.488 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 Gene3D G3DSA:3.30.420.40 204 394 3.2E-78 T 11-11-2016 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 SUPERFAMILY SSF53067 5 194 2.54E-65 T 11-11-2016 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 395 1.0E-156 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 Pfam PF00871 Acetokinase family 6 390 9.5E-153 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 11-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 Gene3D G3DSA:3.30.420.40 86 203 2.9E-7 T 11-11-2016 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 11-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 PRINTS PR00471 Acetate kinase family signature 377 389 1.4E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 PRINTS PR00471 Acetate kinase family signature 6 17 1.4E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 PRINTS PR00471 Acetate kinase family signature 172 185 1.4E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 PRINTS PR00471 Acetate kinase family signature 299 312 1.4E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 PRINTS PR00471 Acetate kinase family signature 321 337 1.4E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 PRINTS PR00471 Acetate kinase family signature 202 223 1.4E-45 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS12120 63b555116d7581be0da48acca45b774f 399 PIRSF PIRSF000722 2 399 2.7E-145 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 SUPERFAMILY SSF53474 2185 2311 4.86E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 194 364 4.1E-10 T 11-11-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 SUPERFAMILY SSF69318 101 205 4.19E-25 T 11-11-2016 S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 SUPERFAMILY SSF69318 464 677 4.19E-25 T 11-11-2016 S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 SUPERFAMILY SSF69318 764 898 1.83E-12 T 11-11-2016 S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 Gene3D G3DSA:3.40.50.1820 2143 2260 7.7E-5 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1630 1659 0.0035 T 11-11-2016 IPR006530 YD repeat S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1534 1569 4.1E-5 T 11-11-2016 IPR006530 YD repeat S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 Pfam PF11187 Protein of unknown function (DUF2974) 2179 2264 2.0E-8 T 11-11-2016 IPR024499 Protein of unknown function DUF2974 S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 552 613 4.9E-9 T 11-11-2016 S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1965 2031 5.2E-18 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 S40542_RS17595 22b7973f4e3f75925802d1fecea99cbc 2347 Pfam PF05593 RHS Repeat 1630 1664 5.8E-5 T 11-11-2016 IPR031325 RHS repeat S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 7.1E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 7.1E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.1E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 7.1E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 81 178 1.3E-9 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 5 190 8.0E-52 T 11-11-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 183 3.6E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 4.1E-37 T 11-11-2016 IPR023214 HAD-like domain S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 SUPERFAMILY SSF56784 1 215 1.08E-51 T 11-11-2016 IPR023214 HAD-like domain S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 Gene3D G3DSA:1.10.150.240 20 80 7.9E-7 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 Gene3D G3DSA:3.40.50.1000 87 213 5.7E-37 T 11-11-2016 IPR023214 HAD-like domain S40542_RS09465 5e50dbf29f693e606db4e20479cd157e 215 Gene3D G3DSA:3.40.50.1000 1 19 5.7E-37 T 11-11-2016 IPR023214 HAD-like domain S40542_RS17540 631c55ad83c5f765931eaf4e7d5a790e 1129 Gene3D G3DSA:3.40.50.300 1 166 1.2E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17540 631c55ad83c5f765931eaf4e7d5a790e 1129 Gene3D G3DSA:3.40.50.300 970 1125 1.2E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17540 631c55ad83c5f765931eaf4e7d5a790e 1129 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1122 20.511 T 11-11-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 S40542_RS17540 631c55ad83c5f765931eaf4e7d5a790e 1129 SUPERFAMILY SSF52540 1 213 1.24E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17540 631c55ad83c5f765931eaf4e7d5a790e 1129 SUPERFAMILY SSF52540 1006 1124 1.24E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17540 631c55ad83c5f765931eaf4e7d5a790e 1129 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1113 7.3E-63 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal S40542_RS17790 053e93c02322121442ca8f5eacf3f39f 153 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 112 122 - T 11-11-2016 IPR020549 Endoribonuclease YbeY, conserved site S40542_RS17790 053e93c02322121442ca8f5eacf3f39f 153 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 146 23.443 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 S40542_RS17790 053e93c02322121442ca8f5eacf3f39f 153 Pfam PF02130 Uncharacterized protein family UPF0054 18 141 3.4E-37 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 S40542_RS17790 053e93c02322121442ca8f5eacf3f39f 153 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 38 142 1.2E-35 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 S40542_RS17790 053e93c02322121442ca8f5eacf3f39f 153 SUPERFAMILY SSF55486 3 148 1.47E-48 T 11-11-2016 S40542_RS17790 053e93c02322121442ca8f5eacf3f39f 153 Gene3D G3DSA:3.40.390.30 15 150 4.0E-48 T 11-11-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 S40542_RS05555 1888051f72926e8f9b3dd962c5803f90 289 Pfam PF00072 Response regulator receiver domain 172 274 4.0E-6 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS05555 1888051f72926e8f9b3dd962c5803f90 289 Gene3D G3DSA:3.40.50.2300 169 272 8.2E-11 T 11-11-2016 S40542_RS05555 1888051f72926e8f9b3dd962c5803f90 289 Gene3D G3DSA:1.10.10.10 5 99 2.9E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS05555 1888051f72926e8f9b3dd962c5803f90 289 SUPERFAMILY SSF46894 3 97 1.96E-15 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS05555 1888051f72926e8f9b3dd962c5803f90 289 SUPERFAMILY SSF52172 169 272 2.13E-9 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS05555 1888051f72926e8f9b3dd962c5803f90 289 SMART SM00862 21 96 2.9E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS05555 1888051f72926e8f9b3dd962c5803f90 289 Pfam PF00486 Transcriptional regulatory protein, C terminal 21 96 4.1E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS17165 d41774be62305c9deb32e2e269c3f33c 236 Gene3D G3DSA:3.30.420.10 2 179 7.7E-65 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS17165 d41774be62305c9deb32e2e269c3f33c 236 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 4 236 3.2E-95 T 11-11-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS17165 d41774be62305c9deb32e2e269c3f33c 236 Pfam PF00929 Exonuclease 6 165 1.4E-41 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS17165 d41774be62305c9deb32e2e269c3f33c 236 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 218 2.9E-73 T 11-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS17165 d41774be62305c9deb32e2e269c3f33c 236 SMART SM00479 4 177 5.8E-51 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS17165 d41774be62305c9deb32e2e269c3f33c 236 SUPERFAMILY SSF53098 2 179 5.06E-56 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 SMART SM01016 1 87 3.8E-32 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 Gene3D G3DSA:3.40.50.620 113 462 4.8E-103 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 Pfam PF05746 DALR anticodon binding domain 463 580 3.0E-32 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 SUPERFAMILY SSF52374 111 456 4.93E-85 T 11-11-2016 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 Gene3D G3DSA:3.30.1360.70 1 104 1.4E-33 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 87 2.8E-22 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 SMART SM00836 463 580 1.8E-38 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 580 1.4E-168 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 SUPERFAMILY SSF47323 459 580 1.11E-33 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 580 26.415 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 SUPERFAMILY SSF55190 1 102 1.83E-23 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 Pfam PF00750 tRNA synthetases class I (R) 102 449 8.1E-122 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 Gene3D G3DSA:1.10.730.10 463 580 8.8E-35 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 123 134 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 146 4.0E-25 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 167 4.0E-25 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 4.0E-25 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS02390 1a85a03a1f75820731f673070de9541e 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 130 4.0E-25 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS18745 811ffc8e816e6cda8e8507201c076280 391 Pfam PF01098 Cell cycle protein 25 378 3.3E-114 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 S40542_RS18745 811ffc8e816e6cda8e8507201c076280 391 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 19 387 40.587 T 11-11-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 S40542_RS18745 811ffc8e816e6cda8e8507201c076280 391 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 376 1.2E-129 T 11-11-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 S40542_RS18745 811ffc8e816e6cda8e8507201c076280 391 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 335 359 - T 11-11-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 2.5E-51 T 11-11-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 PIRSF PIRSF000114 1 335 3.4E-101 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 SUPERFAMILY SSF48179 183 335 1.87E-56 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 Gene3D G3DSA:1.10.1040.10 188 330 8.7E-58 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 161 4.7E-52 T 11-11-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 SUPERFAMILY SSF51735 8 182 4.09E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 37.871 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 Gene3D G3DSA:3.40.50.720 3 187 7.6E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.5E-43 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 2.5E-43 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 2.5E-43 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 2.5E-43 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 2.5E-43 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS03695 69c3f703e6fb72937e97c9ec9f1653b1 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 2.5E-43 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 Gene3D G3DSA:2.30.30.30 1 65 3.4E-29 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.35 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 4.9E-25 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 PIRSF PIRSF005901 2 188 1.8E-66 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 Gene3D G3DSA:2.40.50.140 130 187 2.8E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 SUPERFAMILY SSF50104 2 63 8.02E-21 T 11-11-2016 IPR008991 Translation protein SH3-like domain S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 2.6E-79 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.8E-26 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 Gene3D G3DSA:2.40.50.140 66 129 1.2E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 SUPERFAMILY SSF50249 69 128 3.64E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 SMART SM00841 131 186 9.5E-33 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-11-2016 IPR013852 Translation elongation factor P/YeiP, conserved site S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.6E-22 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 SMART SM01185 69 123 4.3E-26 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 S40542_RS19425 109afbb4448c8b8cbc4ebb7a56b0cc11 188 SUPERFAMILY SSF50249 130 187 1.06E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS12725 3dd08b18cc4d9e36888f878d985d4ef1 250 Gene3D G3DSA:3.40.970.10 2 49 6.2E-22 T 11-11-2016 IPR011320 Ribonuclease H1, N-terminal S40542_RS12725 3dd08b18cc4d9e36888f878d985d4ef1 250 SUPERFAMILY SSF53098 81 226 8.73E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS12725 3dd08b18cc4d9e36888f878d985d4ef1 250 SUPERFAMILY SSF55658 3 48 2.72E-14 T 11-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal S40542_RS12725 3dd08b18cc4d9e36888f878d985d4ef1 250 Pfam PF01693 Caulimovirus viroplasmin 4 46 7.1E-20 T 11-11-2016 IPR011320 Ribonuclease H1, N-terminal S40542_RS12725 3dd08b18cc4d9e36888f878d985d4ef1 250 Gene3D G3DSA:3.30.420.10 81 227 6.8E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS12725 3dd08b18cc4d9e36888f878d985d4ef1 250 Pfam PF00075 RNase H 82 221 2.9E-28 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 S40542_RS06400 6e99d654c97fe3dce36f500eaea14232 174 Pfam PF03748 Flagellar basal body-associated protein FliL 73 174 8.1E-21 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 SUPERFAMILY SSF51412 22 117 5.49E-40 T 11-11-2016 S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 SUPERFAMILY SSF51412 196 261 5.49E-40 T 11-11-2016 S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 Gene3D G3DSA:3.20.20.70 18 262 9.0E-87 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 Pfam PF00571 CBS domain 166 217 6.0E-6 T 11-11-2016 IPR000644 CBS domain S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 Pfam PF00571 CBS domain 112 156 7.6E-8 T 11-11-2016 IPR000644 CBS domain S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 SUPERFAMILY SSF54631 114 219 1.25E-25 T 11-11-2016 S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 SMART SM01240 24 262 6.4E-38 T 11-11-2016 S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 25 262 1.9E-49 T 11-11-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 SMART SM00116 175 223 4.7E-7 T 11-11-2016 IPR000644 CBS domain S40542_RS22935 4a9ec0f89069b45da626be304048871f 262 SMART SM00116 113 161 7.1E-5 T 11-11-2016 IPR000644 CBS domain S40542_RS01615 feabfdf6c4d0e0b49a438df1c238965e 650 Pfam PF13667 ThiC-associated domain 28 110 7.5E-32 T 11-11-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 S40542_RS01615 feabfdf6c4d0e0b49a438df1c238965e 650 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 149 603 56.307 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 S40542_RS01615 feabfdf6c4d0e0b49a438df1c238965e 650 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 149 601 1.4E-220 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 S40542_RS01615 feabfdf6c4d0e0b49a438df1c238965e 650 Pfam PF01964 Radical SAM ThiC family 150 597 1.5E-199 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 PRINTS PR00775 90kDa heat shock protein signature 173 190 3.8E-61 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.8E-61 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 PRINTS PR00775 90kDa heat shock protein signature 191 209 3.8E-61 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.8E-61 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.8E-61 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.8E-61 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.8E-61 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 184 8.3E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 634 32.96 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 SUPERFAMILY SSF54211 240 495 2.96E-97 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 PIRSF PIRSF002583 2 638 1.7E-219 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 SUPERFAMILY SSF55874 8 213 3.54E-66 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 Gene3D G3DSA:3.30.565.10 8 248 1.5E-83 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 SUPERFAMILY SSF110942 522 634 7.45E-38 T 11-11-2016 S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 Pfam PF00183 Hsp90 protein 222 633 5.5E-132 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 SMART SM00387 30 185 1.1E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS14795 3aa673d86ed207e186bc42c4f83a1a4f 638 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 11-11-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 Gene3D G3DSA:1.25.40.10 133 231 6.1E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 Gene3D G3DSA:1.25.40.10 316 397 2.9E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 SUPERFAMILY SSF48452 56 245 6.92E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 Gene3D G3DSA:1.25.40.10 55 98 2.5E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 SUPERFAMILY SSF48452 228 398 2.5E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 Gene3D G3DSA:1.25.40.10 232 315 1.2E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 Gene3D G3DSA:1.25.40.10 99 132 2.6E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 Pfam PF13176 Tetratricopeptide repeat 89 115 0.0072 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 SMART SM00028 157 190 9.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 SMART SM00028 331 364 120.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 SMART SM00028 84 117 28.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS14905 b435c748db67501fe0a5b416c526de2f 420 SMART SM00028 366 398 71.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS06655 fa8e740f8761c58f36a6b80ac8c9dd4a 823 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 823 23.613 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 S40542_RS06655 fa8e740f8761c58f36a6b80ac8c9dd4a 823 Pfam PF01103 Surface antigen 449 823 2.1E-73 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 S40542_RS06655 fa8e740f8761c58f36a6b80ac8c9dd4a 823 Pfam PF07244 Surface antigen variable number repeat 348 422 2.9E-8 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 S40542_RS06655 fa8e740f8761c58f36a6b80ac8c9dd4a 823 Pfam PF07244 Surface antigen variable number repeat 178 264 1.4E-14 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 S40542_RS06655 fa8e740f8761c58f36a6b80ac8c9dd4a 823 Pfam PF07244 Surface antigen variable number repeat 267 345 2.0E-11 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 S40542_RS06655 fa8e740f8761c58f36a6b80ac8c9dd4a 823 Pfam PF07244 Surface antigen variable number repeat 93 173 4.5E-10 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 S40542_RS06655 fa8e740f8761c58f36a6b80ac8c9dd4a 823 PIRSF PIRSF006076 1 823 2.5E-237 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 S40542_RS06655 fa8e740f8761c58f36a6b80ac8c9dd4a 823 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 25 823 1.9E-263 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 1.1E-49 T 11-11-2016 S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.4E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.4E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.4E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.4E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.4E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.4E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 8.3E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.3E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.3E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 Gene3D G3DSA:3.40.50.720 2 246 1.8E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 SUPERFAMILY SSF51735 2 246 7.22E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS17820 20f9bf2f5306eaf42ffd1d51e6c5a8d9 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 182 0.0011 T 11-11-2016 S40542_RS00440 d6c4b701e50b33cb013432510931b51a 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 5.7E-105 T 11-11-2016 IPR019991 GTP-binding protein, ribosome biogenesis S40542_RS00440 d6c4b701e50b33cb013432510931b51a 314 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 117 137 5.0E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS00440 d6c4b701e50b33cb013432510931b51a 314 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 178 5.0E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS00440 d6c4b701e50b33cb013432510931b51a 314 Pfam PF01926 50S ribosome-binding GTPase 117 175 3.2E-14 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 S40542_RS00440 d6c4b701e50b33cb013432510931b51a 314 Gene3D G3DSA:1.10.1580.10 174 264 1.5E-29 T 11-11-2016 IPR023179 GTP-binding protein, orthogonal bundle domain S40542_RS00440 d6c4b701e50b33cb013432510931b51a 314 SUPERFAMILY SSF52540 9 187 1.67E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00440 d6c4b701e50b33cb013432510931b51a 314 Gene3D G3DSA:3.40.50.300 18 170 8.0E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00440 d6c4b701e50b33cb013432510931b51a 314 PIRSF PIRSF006230 1 277 4.3E-100 T 11-11-2016 IPR016478 GTPase, MTG1 S40542_RS10725 33a3e473605d9dc9a835ac8b5d282b7c 174 SUPERFAMILY SSF52980 6 172 3.22E-22 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 S40542_RS10725 33a3e473605d9dc9a835ac8b5d282b7c 174 Gene3D G3DSA:3.10.640.10 6 173 6.8E-22 T 11-11-2016 S40542_RS10725 33a3e473605d9dc9a835ac8b5d282b7c 174 Pfam PF07152 YaeQ protein 6 166 7.0E-19 T 11-11-2016 IPR009822 YaeQ S40542_RS10725 33a3e473605d9dc9a835ac8b5d282b7c 174 SMART SM01322 6 172 1.0E-5 T 11-11-2016 IPR009822 YaeQ S40542_RS03015 f64b606487005160d0dbff49c2272cb2 318 Gene3D G3DSA:3.40.50.1820 2 294 7.7E-60 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03015 f64b606487005160d0dbff49c2272cb2 318 Pfam PF00561 alpha/beta hydrolase fold 23 277 8.4E-27 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS03015 f64b606487005160d0dbff49c2272cb2 318 SUPERFAMILY SSF53474 7 293 8.84E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 SMART SM00387 326 432 9.8E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 430 1.1E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 2.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 2.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 SMART SM00091 115 179 6.3E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 Gene3D G3DSA:3.30.565.10 312 430 1.2E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 SUPERFAMILY SSF55785 104 176 9.42E-7 T 11-11-2016 IPR000014 PAS domain S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 SUPERFAMILY SSF55874 306 429 1.02E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 SUPERFAMILY SSF47384 222 296 2.94E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS08115 18831bdd98c0204d74b947e6d223e329 435 Gene3D G3DSA:3.30.450.20 112 178 1.6E-9 T 11-11-2016 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 SUPERFAMILY SSF52096 5 317 4.29E-95 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 2.4E-150 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 1.5E-44 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 199 208 1.5E-44 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 155 168 1.5E-44 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 136 152 1.5E-44 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 133 1.5E-44 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 171 184 1.5E-44 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 Gene3D G3DSA:3.90.226.10 59 274 1.0E-47 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 150 8.4E-60 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS06695 4a771a2eddb2fa7223357d837d544f1e 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 318 48.485 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS01690 76ffed94e5771452754110900d1749c7 113 SUPERFAMILY SSF54995 1 102 3.01E-37 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01690 76ffed94e5771452754110900d1749c7 113 Gene3D G3DSA:3.30.70.60 1 102 7.9E-41 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 S40542_RS01690 76ffed94e5771452754110900d1749c7 113 Pfam PF01250 Ribosomal protein S6 3 91 8.5E-27 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01690 76ffed94e5771452754110900d1749c7 113 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.7E-36 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01690 76ffed94e5771452754110900d1749c7 113 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.051 T 11-11-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 S40542_RS12245 1105a6839d16926493ffc6f3ce7bf88b 206 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 11-11-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 S40542_RS12245 1105a6839d16926493ffc6f3ce7bf88b 206 Pfam PF01081 KDPG and KHG aldolase 3 198 2.3E-71 T 11-11-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 S40542_RS12245 1105a6839d16926493ffc6f3ce7bf88b 206 SUPERFAMILY SSF51569 2 204 6.04E-67 T 11-11-2016 S40542_RS12245 1105a6839d16926493ffc6f3ce7bf88b 206 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 4 204 8.7E-77 T 11-11-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 S40542_RS12245 1105a6839d16926493ffc6f3ce7bf88b 206 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 11-11-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 S40542_RS12245 1105a6839d16926493ffc6f3ce7bf88b 206 Gene3D G3DSA:3.20.20.70 1 204 1.5E-74 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS06570 a7ea5f9c3f201d17e85a363988b80cd0 424 Pfam PF07719 Tetratricopeptide repeat 172 204 1.3E-5 T 11-11-2016 IPR013105 Tetratricopeptide repeat 2 S40542_RS06570 a7ea5f9c3f201d17e85a363988b80cd0 424 Gene3D G3DSA:1.25.40.10 169 208 3.0E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06570 a7ea5f9c3f201d17e85a363988b80cd0 424 Pfam PF14559 Tetratricopeptide repeat 221 286 6.3E-6 T 11-11-2016 S40542_RS06570 a7ea5f9c3f201d17e85a363988b80cd0 424 SMART SM00028 171 204 4.3E-6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS06570 a7ea5f9c3f201d17e85a363988b80cd0 424 Gene3D G3DSA:1.25.40.10 209 287 1.1E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06570 a7ea5f9c3f201d17e85a363988b80cd0 424 SUPERFAMILY SSF48452 169 294 8.97E-21 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06570 a7ea5f9c3f201d17e85a363988b80cd0 424 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 7 120 1.9E-19 T 11-11-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 Gene3D G3DSA:3.30.70.1050 1 118 3.7E-41 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 PIRSF PIRSF003095 1 434 4.5E-133 T 11-11-2016 IPR005215 Trigger factor GO:0015031 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 Gene3D G3DSA:3.10.50.40 154 215 5.7E-9 T 11-11-2016 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 TIGRFAM TIGR00115 tig: trigger factor 11 412 3.3E-146 T 11-11-2016 IPR005215 Trigger factor GO:0015031 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 236 6.6E-14 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 4.5E-37 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 SUPERFAMILY SSF109998 248 429 4.32E-49 T 11-11-2016 IPR027304 Trigger factor/SurA domain S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 Hamap MF_00303 Trigger factor [tig]. 1 418 22.145 T 11-11-2016 IPR005215 Trigger factor GO:0015031 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 SUPERFAMILY SSF102735 1 131 4.19E-41 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 SUPERFAMILY SSF54534 90 240 1.96E-37 T 11-11-2016 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 Gene3D G3DSA:1.10.3120.10 216 388 5.1E-61 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 S40542_RS16895 e829da5fb2d9cc6b08a1c8faa0a7469d 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 3.5E-43 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 S40542_RS12890 5307bf954b9fea8554f949b11b1b5677 489 Gene3D G3DSA:3.50.50.60 10 83 1.0E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12890 5307bf954b9fea8554f949b11b1b5677 489 Gene3D G3DSA:3.50.50.60 180 265 1.0E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12890 5307bf954b9fea8554f949b11b1b5677 489 SUPERFAMILY SSF51905 142 303 1.19E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12890 5307bf954b9fea8554f949b11b1b5677 489 SUPERFAMILY SSF51905 10 97 1.19E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12890 5307bf954b9fea8554f949b11b1b5677 489 Pfam PF01266 FAD dependent oxidoreductase 13 379 1.2E-14 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 Pfam PF08442 ATP-grasp domain 2 203 5.0E-80 T 11-11-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 Gene3D G3DSA:3.40.50.261 241 383 1.6E-66 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-11-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 PIRSF PIRSF001554 1 388 6.5E-153 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 Gene3D G3DSA:3.30.1490.20 22 95 3.8E-35 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 Pfam PF00549 CoA-ligase 262 382 3.0E-25 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 SUPERFAMILY SSF52210 240 385 1.44E-54 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.434 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.1E-173 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 SUPERFAMILY SSF56059 1 238 8.84E-80 T 11-11-2016 S40542_RS12035 150fcf3b920e1c99c5731ffd09351e8f 388 Gene3D G3DSA:3.30.470.20 96 239 1.3E-55 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS07130 fde6f472f14ddc597c6565ccafcf6bbf 266 Gene3D G3DSA:3.60.21.10 190 243 1.9E-32 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS07130 fde6f472f14ddc597c6565ccafcf6bbf 266 Gene3D G3DSA:3.60.21.10 10 131 1.9E-32 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS07130 fde6f472f14ddc597c6565ccafcf6bbf 266 Pfam PF00149 Calcineurin-like phosphoesterase 11 207 4.5E-12 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 S40542_RS07130 fde6f472f14ddc597c6565ccafcf6bbf 266 SUPERFAMILY SSF56300 9 229 1.29E-28 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 SUPERFAMILY SSF52954 318 412 1.51E-21 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 412 30.878 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 Pfam PF13393 Histidyl-tRNA synthetase 1 302 8.0E-44 T 11-11-2016 S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 PIRSF PIRSF001549 1 414 2.2E-117 T 11-11-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 1 398 6.7E-151 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 Gene3D G3DSA:3.30.930.10 1 175 6.6E-95 T 11-11-2016 S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 Gene3D G3DSA:3.30.930.10 211 311 6.6E-95 T 11-11-2016 S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 Gene3D G3DSA:3.40.50.800 318 411 1.4E-28 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 Pfam PF03129 Anticodon binding domain 321 411 2.8E-9 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS04010 352810c3627ed67a4e794cb79b068ef8 415 SUPERFAMILY SSF55681 1 314 5.18E-102 T 11-11-2016 S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 SUPERFAMILY SSF48179 210 370 2.21E-42 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 360 484 3.6E-17 T 11-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 3.8E-29 T 11-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 SUPERFAMILY SSF51735 27 209 4.58E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 34 204 6.5E-57 T 11-11-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 4.7E-121 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 SUPERFAMILY SSF48179 349 486 1.04E-39 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 Gene3D G3DSA:3.40.50.720 1 201 9.0E-70 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15530 49aa2a57d4a9a1ed4ef4d554fbe72b69 490 Gene3D G3DSA:1.10.1040.10 331 483 4.5E-17 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS14010 311fb8d6cd244d0747fc5488a275c1e6 228 Pfam PF07883 Cupin domain 86 147 6.9E-8 T 11-11-2016 IPR013096 Cupin 2, conserved barrel S40542_RS14010 311fb8d6cd244d0747fc5488a275c1e6 228 SUPERFAMILY SSF51182 69 152 1.0E-11 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS14010 311fb8d6cd244d0747fc5488a275c1e6 228 Gene3D G3DSA:2.60.120.10 67 151 7.4E-10 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 Gene3D G3DSA:1.10.601.10 44 159 7.2E-56 T 11-11-2016 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 SUPERFAMILY SSF88659 220 318 2.43E-25 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 Gene3D G3DSA:1.10.10.10 163 212 5.2E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 114 127 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 44 324 6.7E-142 T 11-11-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 SUPERFAMILY SSF88659 163 237 9.59E-17 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 283 309 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 Pfam PF04539 Sigma-70 region 3 170 244 1.5E-21 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 Pfam PF00140 Sigma-70 factor, region 1.2 52 82 7.1E-10 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 SUPERFAMILY SSF88946 52 160 1.73E-44 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 Pfam PF04542 Sigma-70 region 2 90 159 3.4E-21 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 8 324 39.924 T 11-11-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 Gene3D G3DSA:1.10.10.10 254 318 1.8E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 PRINTS PR00046 Major sigma-70 factor signature 298 309 3.1E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 PRINTS PR00046 Major sigma-70 factor signature 138 146 3.1E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 PRINTS PR00046 Major sigma-70 factor signature 283 298 3.1E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 PRINTS PR00046 Major sigma-70 factor signature 114 127 3.1E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 PRINTS PR00046 Major sigma-70 factor signature 262 274 3.1E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 87 312 1.6E-37 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS04475 ada9e7d3fa59e272ea070a5fe87afe8c 327 Pfam PF04545 Sigma-70, region 4 258 310 1.2E-17 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 SUPERFAMILY SSF48452 205 430 3.03E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 Gene3D G3DSA:1.25.40.10 188 283 6.9E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 Gene3D G3DSA:1.25.40.10 333 435 6.8E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 Gene3D G3DSA:1.25.40.10 89 187 2.7E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 SMART SM00028 88 121 40.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 SMART SM00028 398 431 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 SMART SM00028 330 363 0.0047 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 SMART SM00028 122 155 0.43 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 SMART SM00028 156 189 37.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 SUPERFAMILY SSF48452 88 252 2.24E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09055 08a6da12a7ce140aba31f9b30a2f824f 453 Pfam PF14559 Tetratricopeptide repeat 342 386 1.3E-6 T 11-11-2016 S40542_RS02675 fd6f0352be622ab5a68143b90c1d1763 145 Gene3D G3DSA:3.60.90.10 11 122 2.2E-36 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 S40542_RS02675 fd6f0352be622ab5a68143b90c1d1763 145 SUPERFAMILY SSF56276 14 121 2.75E-26 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 S40542_RS02675 fd6f0352be622ab5a68143b90c1d1763 145 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 14 121 1.2E-35 T 11-11-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 S40542_RS02675 fd6f0352be622ab5a68143b90c1d1763 145 Pfam PF02675 S-adenosylmethionine decarboxylase 17 121 8.9E-31 T 11-11-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 Gene3D G3DSA:3.40.50.1370 4 143 2.6E-50 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 SUPERFAMILY SSF53671 2 317 6.02E-85 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 3.2E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 3.2E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 3.2E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 3.2E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 2.7E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 2.7E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 2.7E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 2.7E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 2.7E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 Gene3D G3DSA:3.40.50.1370 144 303 8.2E-46 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 315 2.1E-90 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.5E-40 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 S40542_RS04925 f6343e1f303e36b27ba46adac493ab8b 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 314 1.1E-23 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 S40542_RS05195 99c666fa286790cd2312929f88bf663f 282 Gene3D G3DSA:1.10.10.10 1 78 7.6E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS05195 99c666fa286790cd2312929f88bf663f 282 SUPERFAMILY SSF53697 96 260 7.28E-28 T 11-11-2016 S40542_RS05195 99c666fa286790cd2312929f88bf663f 282 SUPERFAMILY SSF46689 1 77 2.87E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS05195 99c666fa286790cd2312929f88bf663f 282 Pfam PF01380 SIS domain 129 243 5.2E-18 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 S40542_RS05195 99c666fa286790cd2312929f88bf663f 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 75 6.9E-21 T 11-11-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 S40542_RS05195 99c666fa286790cd2312929f88bf663f 282 Gene3D G3DSA:3.40.50.10490 102 261 1.9E-30 T 11-11-2016 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SUPERFAMILY SSF54211 298 470 1.87E-45 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Gene3D G3DSA:3.30.230.70 3 223 2.8E-86 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Gene3D G3DSA:3.30.230.70 316 544 1.7E-84 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Pfam PF00575 S1 RNA binding domain 621 692 1.3E-20 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 7.6E-21 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 1.3E-22 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SUPERFAMILY SSF50249 609 695 2.91E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Gene3D G3DSA:3.30.1370.10 554 620 1.7E-26 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 693 0.0 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SMART SM00322 554 619 3.4E-13 T 11-11-2016 IPR004087 K Homology domain GO:0003676 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Gene3D G3DSA:2.40.50.140 621 696 1.3E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SMART SM00316 622 692 8.3E-27 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SUPERFAMILY SSF55666 452 551 2.75E-26 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Gene3D G3DSA:1.10.10.400 225 315 1.9E-23 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SUPERFAMILY SSF54791 554 631 1.39E-16 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SUPERFAMILY SSF46915 239 322 1.44E-17 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Pfam PF00013 KH domain 558 615 5.2E-10 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SUPERFAMILY SSF55666 144 234 9.29E-31 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 1.5E-13 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 695 30.706 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 322 9.7E-23 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 SUPERFAMILY SSF54211 3 143 2.18E-51 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS06005 2c854053a7a87b4254a72b057bcf30ae 709 PIRSF PIRSF005499 1 709 2.7E-301 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 S40542_RS15030 4a8893459d2ae6a6cc2682773df5ce78 396 Gene3D G3DSA:3.40.50.150 184 395 8.8E-64 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS15030 4a8893459d2ae6a6cc2682773df5ce78 396 Gene3D G3DSA:3.30.750.80 73 179 7.0E-35 T 11-11-2016 S40542_RS15030 4a8893459d2ae6a6cc2682773df5ce78 396 Gene3D G3DSA:2.30.130.10 5 72 1.0E-25 T 11-11-2016 IPR015947 PUA-like domain S40542_RS15030 4a8893459d2ae6a6cc2682773df5ce78 396 SUPERFAMILY SSF53335 79 392 9.28E-73 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS15030 4a8893459d2ae6a6cc2682773df5ce78 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.932 T 11-11-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS15030 4a8893459d2ae6a6cc2682773df5ce78 396 SUPERFAMILY SSF88697 5 72 2.13E-17 T 11-11-2016 IPR015947 PUA-like domain S40542_RS15030 4a8893459d2ae6a6cc2682773df5ce78 396 SMART SM00359 3 88 3.0E-14 T 11-11-2016 IPR002478 PUA domain GO:0003723 S40542_RS15030 4a8893459d2ae6a6cc2682773df5ce78 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 112 372 8.7E-31 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 SUPERFAMILY SSF82866 794 1018 1.09E-43 T 11-11-2016 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 SUPERFAMILY SSF82693 264 318 1.36E-10 T 11-11-2016 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 SUPERFAMILY SSF82693 140 178 1.36E-10 T 11-11-2016 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 Gene3D G3DSA:3.30.2090.10 718 790 1.6E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 Gene3D G3DSA:3.30.2090.10 179 260 3.1E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 458 481 2.2E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.2E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 352 373 2.2E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.2E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 433 456 2.2E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 2.2E-26 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 Gene3D G3DSA:1.20.1640.10 284 489 1.9E-40 T 11-11-2016 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 SUPERFAMILY SSF82693 43 132 7.06E-18 T 11-11-2016 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 SUPERFAMILY SSF82714 179 260 7.59E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 SUPERFAMILY SSF82866 288 482 5.36E-35 T 11-11-2016 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 Pfam PF00873 AcrB/AcrD/AcrF family 5 1010 1.5E-151 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 Gene3D G3DSA:3.30.70.1430 44 136 1.5E-21 T 11-11-2016 S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 SUPERFAMILY SSF82714 718 790 3.01E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS08420 7dfab7aaf7708eaa9ea5ffd4b935fcfe 1030 Gene3D G3DSA:1.10.3850.10 797 1016 1.0E-54 T 11-11-2016 S40542_RS14960 21ce798a68d174fcbbbc05f60b2395dc 458 Pfam PF03315 Serine dehydratase beta chain 3 155 4.1E-56 T 11-11-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 S40542_RS14960 21ce798a68d174fcbbbc05f60b2395dc 458 Gene3D G3DSA:3.30.1330.90 10 157 7.1E-53 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 S40542_RS14960 21ce798a68d174fcbbbc05f60b2395dc 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 455 2.5E-210 T 11-11-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 S40542_RS14960 21ce798a68d174fcbbbc05f60b2395dc 458 Pfam PF03313 Serine dehydratase alpha chain 190 452 5.2E-100 T 11-11-2016 IPR005130 Serine dehydratase-like, alpha subunit S40542_RS14960 21ce798a68d174fcbbbc05f60b2395dc 458 SUPERFAMILY SSF143548 16 156 1.36E-45 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 S40542_RS12500 df7f47bc6d7f593c470488fb68fc9f45 130 Gene3D G3DSA:3.30.1330.40 5 128 2.3E-46 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS12500 df7f47bc6d7f593c470488fb68fc9f45 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 11-11-2016 IPR019897 RidA, conserved site S40542_RS12500 df7f47bc6d7f593c470488fb68fc9f45 130 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.1E-52 T 11-11-2016 IPR006056 RidA family S40542_RS12500 df7f47bc6d7f593c470488fb68fc9f45 130 Pfam PF01042 Endoribonuclease L-PSP 8 127 4.4E-44 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family S40542_RS12500 df7f47bc6d7f593c470488fb68fc9f45 130 SUPERFAMILY SSF55298 2 128 2.51E-43 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS20395 ff429a43385c103e99249e30a760372a 395 SMART SM00495 36 78 2.3E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS20395 ff429a43385c103e99249e30a760372a 395 Pfam PF14600 Cellulose-binding domain 23 82 1.3E-19 T 11-11-2016 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 S40542_RS20395 ff429a43385c103e99249e30a760372a 395 Gene3D G3DSA:2.10.10.20 24 82 3.2E-19 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS20395 ff429a43385c103e99249e30a760372a 395 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 105 357 9.0E-44 T 11-11-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 S40542_RS20395 ff429a43385c103e99249e30a760372a 395 Gene3D G3DSA:3.20.20.80 88 391 1.1E-80 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS20395 ff429a43385c103e99249e30a760372a 395 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 219 228 - T 11-11-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 S40542_RS20395 ff429a43385c103e99249e30a760372a 395 SUPERFAMILY SSF51055 25 82 1.06E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS20395 ff429a43385c103e99249e30a760372a 395 SUPERFAMILY SSF51445 88 391 2.52E-64 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS05490 8b8d2c24fb991ce5c6e5e1ae9e8caa38 136 Pfam PF01029 NusB family 7 132 3.0E-35 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 S40542_RS05490 8b8d2c24fb991ce5c6e5e1ae9e8caa38 136 SUPERFAMILY SSF48013 3 135 1.96E-42 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 S40542_RS05490 8b8d2c24fb991ce5c6e5e1ae9e8caa38 136 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.66 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 S40542_RS05490 8b8d2c24fb991ce5c6e5e1ae9e8caa38 136 Gene3D G3DSA:1.10.940.10 3 135 1.6E-45 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 S40542_RS05490 8b8d2c24fb991ce5c6e5e1ae9e8caa38 136 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 8.6E-45 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 SUPERFAMILY SSF56645 1 240 7.59E-81 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 5.6E-49 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 Gene3D G3DSA:2.40.110.10 121 216 2.8E-40 T 11-11-2016 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 Gene3D G3DSA:1.20.140.10 217 379 2.8E-67 T 11-11-2016 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.5E-28 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.3E-24 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 Gene3D G3DSA:1.10.540.10 1 117 2.5E-37 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 S40542_RS13855 c180313c703a8b32725f0ce85d28c4fc 385 SUPERFAMILY SSF47203 225 378 3.06E-58 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 S40542_RS12800 3d4974854a93a7d8c667e5c65f855432 134 Pfam PF08818 Domain of unknown function (DU1801) 17 120 6.7E-12 T 11-11-2016 IPR014922 Domain of unknown function DUF1801 S40542_RS12800 3d4974854a93a7d8c667e5c65f855432 134 SUPERFAMILY SSF159888 11 125 3.79E-8 T 11-11-2016 S40542_RS18555 824cf3526eacf1c980a53d1d1bde74d9 164 SUPERFAMILY SSF51161 5 155 1.91E-43 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS18555 824cf3526eacf1c980a53d1d1bde74d9 164 Gene3D G3DSA:2.160.10.10 5 158 1.6E-42 T 11-11-2016 S40542_RS18555 824cf3526eacf1c980a53d1d1bde74d9 164 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 137 2.1E-6 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS18555 824cf3526eacf1c980a53d1d1bde74d9 164 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 52 85 1.0E-7 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS18555 824cf3526eacf1c980a53d1d1bde74d9 164 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 49 3.2E-6 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS16015 5b03b922a8273b4de707de940e9674c1 92 Pfam PF13616 PPIC-type PPIASE domain 19 88 1.5E-19 T 11-11-2016 S40542_RS16015 5b03b922a8273b4de707de940e9674c1 92 Gene3D G3DSA:3.10.50.40 3 91 2.0E-31 T 11-11-2016 S40542_RS16015 5b03b922a8273b4de707de940e9674c1 92 SUPERFAMILY SSF54534 2 87 4.12E-27 T 11-11-2016 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 SMART SM00304 345 399 1.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 Pfam PF02743 Cache domain 42 307 1.1E-21 T 11-11-2016 IPR033479 Double Cache domain 1 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 674 4.0E-49 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 Pfam PF00672 HAMP domain 327 396 1.0E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 SUPERFAMILY SSF58104 367 676 1.31E-76 T 11-11-2016 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 Gene3D G3DSA:1.10.287.950 430 646 3.6E-56 T 11-11-2016 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 Gene3D G3DSA:3.30.450.20 94 187 6.6E-11 T 11-11-2016 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 Gene3D G3DSA:3.30.450.20 188 321 7.6E-16 T 11-11-2016 S40542_RS01245 a755a492529a9a412e90e793ce2b3945 676 SMART SM00283 414 675 6.8E-68 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00395 6b6da18de8b27a2ebe2f3b01469dd4cb 388 SUPERFAMILY SSF111369 59 236 2.35E-18 T 11-11-2016 S40542_RS00395 6b6da18de8b27a2ebe2f3b01469dd4cb 388 Gene3D G3DSA:2.40.50.100 180 211 6.0E-9 T 11-11-2016 S40542_RS00395 6b6da18de8b27a2ebe2f3b01469dd4cb 388 Gene3D G3DSA:2.40.50.100 72 104 6.0E-9 T 11-11-2016 S40542_RS00395 6b6da18de8b27a2ebe2f3b01469dd4cb 388 Pfam PF13533 Biotin-lipoyl like 75 118 9.5E-6 T 11-11-2016 S40542_RS00395 6b6da18de8b27a2ebe2f3b01469dd4cb 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 372 4.1E-36 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS00395 6b6da18de8b27a2ebe2f3b01469dd4cb 388 Pfam PF13437 HlyD family secretion protein 183 283 1.5E-7 T 11-11-2016 S40542_RS19405 0b5e0ffab5c22ad5cf37a27c9bea5749 286 Pfam PF00892 EamA-like transporter family 8 136 3.4E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS19405 0b5e0ffab5c22ad5cf37a27c9bea5749 286 Pfam PF00892 EamA-like transporter family 148 277 3.3E-15 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS19405 0b5e0ffab5c22ad5cf37a27c9bea5749 286 SUPERFAMILY SSF103481 38 137 3.01E-7 T 11-11-2016 S40542_RS19405 0b5e0ffab5c22ad5cf37a27c9bea5749 286 SUPERFAMILY SSF103481 183 279 5.1E-12 T 11-11-2016 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 SUPERFAMILY SSF46689 378 464 6.72E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 461 1.1E-214 T 11-11-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 Gene3D G3DSA:1.10.8.60 311 388 4.5E-22 T 11-11-2016 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 Pfam PF00072 Response regulator receiver domain 4 109 2.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 Gene3D G3DSA:3.40.50.2300 1 124 2.8E-34 T 11-11-2016 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 Pfam PF00158 Sigma-54 interaction domain 138 304 1.1E-69 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 Gene3D G3DSA:1.10.10.60 396 463 1.7E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 SMART SM00448 2 113 8.4E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 SUPERFAMILY SSF52540 137 381 1.27E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 Pfam PF02954 Bacterial regulatory protein, Fis family 423 461 5.5E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 SMART SM00382 158 301 1.2E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 Gene3D G3DSA:3.40.50.300 135 310 3.3E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01070 9b72a522fbcfd706c79392092010353c 468 SUPERFAMILY SSF52172 1 183 5.27E-39 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 101 2.9E-24 T 11-11-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.632 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 225 247 - T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 PIRSF PIRSF000193 3 272 2.3E-74 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 1.2E-30 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 Gene3D G3DSA:1.10.3730.10 163 269 1.7E-30 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 SUPERFAMILY SSF48179 163 271 1.34E-29 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 6.6E-72 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 SUPERFAMILY SSF51735 4 161 5.78E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04545 5cfdf66526d9f8c5d77914434528acad 273 Gene3D G3DSA:3.40.50.720 2 160 1.6E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01155 e36da09b0d6dcc08d251fc7652f9ab93 153 Gene3D G3DSA:3.10.590.10 1 149 4.9E-28 T 11-11-2016 IPR002740 EVE domain S40542_RS01155 e36da09b0d6dcc08d251fc7652f9ab93 153 SUPERFAMILY SSF88697 1 152 6.89E-57 T 11-11-2016 IPR015947 PUA-like domain S40542_RS01155 e36da09b0d6dcc08d251fc7652f9ab93 153 Pfam PF01878 EVE domain 2 150 1.0E-50 T 11-11-2016 IPR002740 EVE domain S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 Gene3D G3DSA:3.40.50.970 7 188 2.1E-49 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 409 555 1.3E-18 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 SUPERFAMILY SSF52518 8 185 2.11E-29 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 Gene3D G3DSA:3.40.50.970 375 571 3.0E-44 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 SUPERFAMILY SSF52518 379 572 1.75E-37 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 PIRSF PIRSF036565 4 584 7.0E-111 T 11-11-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 SUPERFAMILY SSF52467 205 370 4.44E-7 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 Gene3D G3DSA:3.40.50.1220 205 356 3.5E-13 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS16145 9e62b18ddc66ec9ddc31868980674de6 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 186 1.4E-29 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 579 2.8E-140 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 447 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 490 507 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 465 480 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 2.7E-70 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 Pfam PF01019 Gamma-glutamyltranspeptidase 69 582 4.5E-158 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 S40542_RS10285 cfe29949ae91d2115b5f9cfc2c7603f7 590 SUPERFAMILY SSF56235 46 586 1.7E-171 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS19120 85e6795d0b395bd5db459209ee5a87eb 562 Gene3D G3DSA:3.20.20.450 322 554 2.5E-42 T 11-11-2016 IPR001633 EAL domain S40542_RS19120 85e6795d0b395bd5db459209ee5a87eb 562 SUPERFAMILY SSF141868 323 554 2.62E-44 T 11-11-2016 IPR001633 EAL domain S40542_RS19120 85e6795d0b395bd5db459209ee5a87eb 562 Pfam PF00563 EAL domain 325 553 1.4E-41 T 11-11-2016 IPR001633 EAL domain S40542_RS19120 85e6795d0b395bd5db459209ee5a87eb 562 SMART SM00052 317 558 3.0E-13 T 11-11-2016 IPR001633 EAL domain S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 Gene3D G3DSA:3.30.110.10 88 181 1.3E-38 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 92 177 3.2E-36 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 16 85 3.2E-30 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 16 179 1.1E-69 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 SUPERFAMILY SSF55200 92 181 2.88E-33 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 SUPERFAMILY SSF54364 14 87 1.02E-27 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 ProSitePatterns PS00938 Initiation factor 3 signature. 67 80 - T 11-11-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 10 180 29.129 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 S40542_RS11370 0d2bfaf41e60b4610772b7327b4172c3 182 Gene3D G3DSA:3.10.20.80 12 87 2.6E-34 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 S40542_RS10985 a9db9b1463b8b7d1f806a1d26c4eb5db 646 Gene3D G3DSA:3.90.226.10 301 371 3.5E-20 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10985 a9db9b1463b8b7d1f806a1d26c4eb5db 646 Gene3D G3DSA:3.90.226.10 403 532 3.5E-20 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10985 a9db9b1463b8b7d1f806a1d26c4eb5db 646 Pfam PF03572 Peptidase family S41 308 476 1.6E-15 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS10985 a9db9b1463b8b7d1f806a1d26c4eb5db 646 SUPERFAMILY SSF52096 431 535 5.47E-20 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10985 a9db9b1463b8b7d1f806a1d26c4eb5db 646 SUPERFAMILY SSF52096 62 144 5.47E-20 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS10985 a9db9b1463b8b7d1f806a1d26c4eb5db 646 SUPERFAMILY SSF52096 301 391 5.47E-20 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS01280 8b4bbfeccc2b03b29d5ad5c76ebdc93f 173 Pfam PF01569 PAP2 superfamily 64 167 9.0E-18 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase S40542_RS01280 8b4bbfeccc2b03b29d5ad5c76ebdc93f 173 Gene3D G3DSA:1.20.144.10 5 166 4.8E-34 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase S40542_RS01280 8b4bbfeccc2b03b29d5ad5c76ebdc93f 173 SMART SM00014 59 167 3.1E-13 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase S40542_RS01280 8b4bbfeccc2b03b29d5ad5c76ebdc93f 173 SUPERFAMILY SSF48317 6 168 7.46E-37 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase S40542_RS15760 cc3ec8b2b15a089524a3a2b36a0d26e8 219 SUPERFAMILY SSF55781 74 214 6.28E-13 T 11-11-2016 IPR029016 GAF domain-like S40542_RS15760 cc3ec8b2b15a089524a3a2b36a0d26e8 219 Gene3D G3DSA:3.30.450.40 66 213 1.8E-11 T 11-11-2016 IPR029016 GAF domain-like S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 537 6.6E-44 T 11-11-2016 IPR001162 UvrC family homology region S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 602 27.47 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 Gene3D G3DSA:4.10.860.10 181 241 1.4E-17 T 11-11-2016 IPR001943 UVR domain GO:0005515 S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 SMART SM00278 583 602 0.14 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 SMART SM00278 551 570 93.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 Pfam PF01541 GIY-YIG catalytic domain 17 92 2.3E-12 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 Pfam PF02151 UvrB/uvrC motif 204 236 3.7E-8 T 11-11-2016 IPR001943 UVR domain GO:0005515 S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 SMART SM00465 16 97 1.1E-22 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 Gene3D G3DSA:1.10.150.20 550 604 9.5E-20 T 11-11-2016 S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 SUPERFAMILY SSF46600 188 241 2.22E-11 T 11-11-2016 IPR001943 UVR domain GO:0005515 S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 SUPERFAMILY SSF47781 501 605 8.9E-21 T 11-11-2016 IPR010994 RuvA domain 2-like S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 Gene3D G3DSA:3.40.1440.10 16 96 1.6E-11 T 11-11-2016 IPR027299 GIY-YIG domain S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 583 1.2E-200 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 S40542_RS15320 ada1ab430c30f4967f7e908fdd63c319 607 SUPERFAMILY SSF82771 17 99 4.18E-24 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily S40542_RS12270 36f15c6ed9b74192c82ec38de52df183 309 SUPERFAMILY SSF53850 18 300 6.51E-36 T 11-11-2016 S40542_RS12270 36f15c6ed9b74192c82ec38de52df183 309 Gene3D G3DSA:3.40.190.10 19 100 1.4E-17 T 11-11-2016 S40542_RS12270 36f15c6ed9b74192c82ec38de52df183 309 Gene3D G3DSA:3.40.190.10 236 301 1.4E-17 T 11-11-2016 S40542_RS12270 36f15c6ed9b74192c82ec38de52df183 309 Gene3D G3DSA:3.40.190.100 102 230 3.3E-15 T 11-11-2016 S40542_RS12270 36f15c6ed9b74192c82ec38de52df183 309 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 19 291 3.0E-31 T 11-11-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 Gene3D G3DSA:3.40.190.10 92 199 2.2E-17 T 11-11-2016 S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 Gene3D G3DSA:3.40.190.10 200 254 1.2E-11 T 11-11-2016 S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.9E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.2E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.2E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.2E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 Pfam PF03466 LysR substrate binding domain 92 291 1.4E-25 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 Gene3D G3DSA:1.10.10.10 6 79 8.2E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 SUPERFAMILY SSF46785 6 90 1.09E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18170 7ace5c64e082c8486e8abfb3444fd087 301 SUPERFAMILY SSF53850 88 292 6.65E-25 T 11-11-2016 S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SUPERFAMILY SSF55785 767 890 3.84E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SUPERFAMILY SSF50998 238 350 1.45E-8 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SUPERFAMILY SSF50998 104 201 1.45E-8 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SUPERFAMILY SSF63829 377 618 1.83E-7 T 11-11-2016 S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SUPERFAMILY SSF141868 1196 1440 8.37E-70 T 11-11-2016 IPR001633 EAL domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SMART SM00052 1190 1433 9.7E-74 T 11-11-2016 IPR001633 EAL domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 896 1015 7.7E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Gene3D G3DSA:3.20.20.450 1193 1439 1.4E-72 T 11-11-2016 IPR001633 EAL domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Pfam PF07495 Y_Y_Y domain 672 730 3.8E-7 T 11-11-2016 IPR011123 Two component regulator three Y S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Pfam PF08447 PAS fold 804 885 1.1E-10 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SMART SM00091 900 966 4.1 T 11-11-2016 IPR000014 PAS domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SMART SM00091 778 843 12.0 T 11-11-2016 IPR000014 PAS domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Gene3D G3DSA:3.30.70.270 1021 1188 4.2E-27 T 11-11-2016 S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SUPERFAMILY SSF55785 911 1015 6.28E-11 T 11-11-2016 IPR000014 PAS domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Gene3D G3DSA:3.30.450.20 769 894 1.1E-16 T 11-11-2016 S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Pfam PF00563 EAL domain 1203 1428 3.8E-56 T 11-11-2016 IPR001633 EAL domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Pfam PF08448 PAS fold 906 1010 5.3E-7 T 11-11-2016 IPR013656 PAS fold-4 S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1017 1178 5.1E-14 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Gene3D G3DSA:3.30.450.20 895 1006 2.2E-10 T 11-11-2016 S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1019 1174 6.7E-23 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SUPERFAMILY SSF55073 1024 1182 7.85E-23 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS05370 48ea0fed05344099fa4b0fa3130b7cb0 1448 SMART SM00267 1008 1180 8.6E-19 T 11-11-2016 IPR000160 GGDEF domain S40542_RS20260 421071d49442430086d6ebdc5cbb7224 149 SUPERFAMILY SSF47175 24 148 2.8E-37 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 S40542_RS20260 421071d49442430086d6ebdc5cbb7224 149 Gene3D G3DSA:1.20.120.10 24 148 1.4E-39 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 S40542_RS20260 421071d49442430086d6ebdc5cbb7224 149 PIRSF PIRSF000027 5 149 6.1E-38 T 11-11-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 S40542_RS20260 421071d49442430086d6ebdc5cbb7224 149 Pfam PF01322 Cytochrome C' 29 148 3.2E-36 T 11-11-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 S40542_RS09640 142d396936632865938361d33d59f763 225 SUPERFAMILY SSF52540 1 219 2.03E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09640 142d396936632865938361d33d59f763 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 213 28.224 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 S40542_RS09640 142d396936632865938361d33d59f763 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 1.8E-44 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 S40542_RS09640 142d396936632865938361d33d59f763 225 Gene3D G3DSA:3.40.50.300 1 214 1.8E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09640 142d396936632865938361d33d59f763 225 PIRSF PIRSF006755 1 223 6.0E-69 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 S40542_RS09640 142d396936632865938361d33d59f763 225 Pfam PF13500 AAA domain 3 211 2.1E-32 T 11-11-2016 S40542_RS17975 ca60a9d9f4959d7740f3d1a6b1683bde 234 SUPERFAMILY SSF69593 4 232 3.92E-52 T 11-11-2016 S40542_RS17975 ca60a9d9f4959d7740f3d1a6b1683bde 234 Pfam PF01553 Acyltransferase 64 180 5.9E-32 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS17975 ca60a9d9f4959d7740f3d1a6b1683bde 234 SMART SM00563 67 182 1.5E-45 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS17975 ca60a9d9f4959d7740f3d1a6b1683bde 234 Gene3D G3DSA:3.40.1130.10 48 217 5.3E-18 T 11-11-2016 S40542_RS17975 ca60a9d9f4959d7740f3d1a6b1683bde 234 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 55 179 2.0E-46 T 11-11-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 S40542_RS05565 66321087237ee63dd5630b83864d8ce5 251 Gene3D G3DSA:3.40.1390.30 1 107 4.3E-38 T 11-11-2016 S40542_RS05565 66321087237ee63dd5630b83864d8ce5 251 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 1.1E-61 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 S40542_RS05565 66321087237ee63dd5630b83864d8ce5 251 SUPERFAMILY SSF102705 1 250 9.03E-81 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 S40542_RS05565 66321087237ee63dd5630b83864d8ce5 251 Gene3D G3DSA:3.40.1390.30 108 218 3.4E-30 T 11-11-2016 S40542_RS05565 66321087237ee63dd5630b83864d8ce5 251 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 250 6.0E-70 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 Gene3D G3DSA:3.30.590.10 105 454 1.5E-136 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 11-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 385 397 - T 11-11-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 9.7E-209 T 11-11-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 SUPERFAMILY SSF54368 3 99 3.66E-37 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 SMART SM01230 101 378 3.7E-143 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 11-11-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 Gene3D G3DSA:3.10.20.70 3 104 1.6E-40 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 SUPERFAMILY SSF55931 101 467 1.67E-134 T 11-11-2016 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 94 6.3E-32 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 S40542_RS01085 1121b6638e928da9a49187d5b286a22e 468 Pfam PF00120 Glutamine synthetase, catalytic domain 101 465 2.9E-136 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 Pfam PF00072 Response regulator receiver domain 9 119 1.5E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 Pfam PF02954 Bacterial regulatory protein, Fis family 440 480 6.6E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 SMART SM00382 173 316 6.5E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS16995 e7539045a88b14c899033fabb1362527 482 SUPERFAMILY SSF46689 366 480 2.87E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 Gene3D G3DSA:1.10.8.60 326 398 1.3E-17 T 11-11-2016 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 366 375 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS16995 e7539045a88b14c899033fabb1362527 482 SUPERFAMILY SSF52540 153 395 8.04E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16995 e7539045a88b14c899033fabb1362527 482 Gene3D G3DSA:1.10.10.60 437 479 5.1E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 SUPERFAMILY SSF52172 5 198 1.57E-40 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS16995 e7539045a88b14c899033fabb1362527 482 Gene3D G3DSA:3.40.50.2300 5 131 5.6E-32 T 11-11-2016 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 SMART SM00448 7 119 2.5E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 Gene3D G3DSA:3.40.50.300 149 324 1.2E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16995 e7539045a88b14c899033fabb1362527 482 Pfam PF00158 Sigma-54 interaction domain 154 319 7.5E-63 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS16995 e7539045a88b14c899033fabb1362527 482 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 239 254 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS09935 4c8036eb962babf2355aeb3e2cacf7d6 127 SUPERFAMILY SSF51316 4 125 5.13E-30 T 11-11-2016 IPR011057 Mss4-like S40542_RS09935 4c8036eb962babf2355aeb3e2cacf7d6 127 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 115 8.1E-13 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 S40542_RS09935 4c8036eb962babf2355aeb3e2cacf7d6 127 Gene3D G3DSA:3.90.1590.10 4 124 2.4E-26 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.1E-171 T 11-11-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.1E-288 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 SUPERFAMILY SSF51905 97 261 7.92E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 SUPERFAMILY SSF51905 5 66 7.92E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 Gene3D G3DSA:3.50.50.60 7 233 2.1E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 SMART SM01228 546 617 3.1E-43 T 11-11-2016 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 Pfam PF13932 GidA associated domain 402 616 6.0E-71 T 11-11-2016 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 S40542_RS20750 2a8a35b2a4e7e74f2861f5f514f8a353 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.906 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.5E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.5E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 PRINTS PR00175 Sodium/alanine symporter signature 515 535 2.5E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.5E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 PRINTS PR00175 Sodium/alanine symporter signature 93 115 2.5E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 PRINTS PR00175 Sodium/alanine symporter signature 456 478 2.5E-52 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 546 7.8E-191 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS14315 5847111516fb1aeb0488eecf868d5e24 570 Pfam PF01235 Sodium:alanine symporter family 56 554 2.4E-147 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS09480 b7de0b4541afd80c51690a6152b5fbfa 360 PIRSF PIRSF000525 1 360 1.6E-135 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 S40542_RS09480 b7de0b4541afd80c51690a6152b5fbfa 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 3 359 3.8E-142 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 S40542_RS09480 b7de0b4541afd80c51690a6152b5fbfa 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 359 46.503 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 S40542_RS09480 b7de0b4541afd80c51690a6152b5fbfa 360 Gene3D G3DSA:3.90.1150.10 258 359 1.2E-41 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS09480 b7de0b4541afd80c51690a6152b5fbfa 360 Pfam PF00266 Aminotransferase class-V 3 348 2.4E-50 T 11-11-2016 IPR000192 Aminotransferase class V domain S40542_RS09480 b7de0b4541afd80c51690a6152b5fbfa 360 Gene3D G3DSA:3.40.640.10 17 255 5.5E-90 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS09480 b7de0b4541afd80c51690a6152b5fbfa 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site S40542_RS09480 b7de0b4541afd80c51690a6152b5fbfa 360 SUPERFAMILY SSF53383 2 357 2.63E-107 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS16955 760dca85db3f295ed25e229310ac63ba 239 Pfam PF00149 Calcineurin-like phosphoesterase 3 201 1.7E-11 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 S40542_RS16955 760dca85db3f295ed25e229310ac63ba 239 SUPERFAMILY SSF56300 3 220 4.59E-28 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS16955 760dca85db3f295ed25e229310ac63ba 239 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 238 107.126 T 11-11-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 S40542_RS16955 760dca85db3f295ed25e229310ac63ba 239 Gene3D G3DSA:3.60.21.10 175 207 1.9E-22 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS16955 760dca85db3f295ed25e229310ac63ba 239 Gene3D G3DSA:3.60.21.10 3 127 1.9E-22 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS16955 760dca85db3f295ed25e229310ac63ba 239 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 228 6.9E-89 T 11-11-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 Gene3D G3DSA:1.10.10.10 229 286 1.2E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 Pfam PF04545 Sigma-70, region 4 233 283 7.7E-14 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 PRINTS PR00046 Major sigma-70 factor signature 80 93 1.5E-17 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 PRINTS PR00046 Major sigma-70 factor signature 237 249 1.5E-17 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 PRINTS PR00046 Major sigma-70 factor signature 271 282 1.5E-17 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 PRINTS PR00046 Major sigma-70 factor signature 256 271 1.5E-17 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 SUPERFAMILY SSF88659 208 286 3.74E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 Gene3D G3DSA:2.30.30.170 121 160 4.8E-4 T 11-11-2016 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 SUPERFAMILY SSF88946 15 125 3.92E-39 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 18 286 4.3E-126 T 11-11-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 287 51.266 T 11-11-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 285 4.9E-34 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 Gene3D G3DSA:1.10.601.10 13 120 1.5E-34 T 11-11-2016 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17980 cbc38c4acda860265434c5dd9e715bff 287 Pfam PF04542 Sigma-70 region 2 56 125 1.5E-16 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS14305 4048335194a43d916dd15120fa15d2c3 93 Pfam PF07023 Protein of unknown function (DUF1315) 5 84 2.1E-20 T 11-11-2016 IPR009749 Protein of unknown function DUF1315 S40542_RS03885 966d43f8f9bda7643232d0432e410898 165 Pfam PF04542 Sigma-70 region 2 6 74 3.0E-13 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS03885 966d43f8f9bda7643232d0432e410898 165 Gene3D G3DSA:1.10.1740.10 3 75 5.0E-13 T 11-11-2016 S40542_RS03885 966d43f8f9bda7643232d0432e410898 165 SUPERFAMILY SSF88659 83 157 1.57E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS03885 966d43f8f9bda7643232d0432e410898 165 SUPERFAMILY SSF88946 4 94 1.02E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS03885 966d43f8f9bda7643232d0432e410898 165 Gene3D G3DSA:1.10.10.10 104 155 5.7E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03885 966d43f8f9bda7643232d0432e410898 165 Pfam PF08281 Sigma-70, region 4 105 157 6.1E-14 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS03885 966d43f8f9bda7643232d0432e410898 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 154 2.4E-21 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS06240 60f1284903c97de3a2587a9ac1d24bd2 308 SUPERFAMILY SSF52922 172 303 5.1E-25 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS06240 60f1284903c97de3a2587a9ac1d24bd2 308 Gene3D G3DSA:3.40.50.970 4 160 1.1E-29 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS06240 60f1284903c97de3a2587a9ac1d24bd2 308 Gene3D G3DSA:3.40.50.920 174 303 1.2E-27 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS06240 60f1284903c97de3a2587a9ac1d24bd2 308 SUPERFAMILY SSF52518 4 163 1.93E-31 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS06240 60f1284903c97de3a2587a9ac1d24bd2 308 Pfam PF02779 Transketolase, pyrimidine binding domain 4 149 1.1E-16 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS06240 60f1284903c97de3a2587a9ac1d24bd2 308 SMART SM00861 2 165 1.4E-17 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS06240 60f1284903c97de3a2587a9ac1d24bd2 308 Pfam PF02780 Transketolase, C-terminal domain 175 295 2.1E-22 T 11-11-2016 IPR033248 Transketolase, C-terminal domain S40542_RS16210 6da46af73b03a9a1e8e3251ee824d6a0 162 SMART SM00862 21 91 3.5E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS16210 6da46af73b03a9a1e8e3251ee824d6a0 162 Gene3D G3DSA:1.10.10.10 4 92 9.1E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS16210 6da46af73b03a9a1e8e3251ee824d6a0 162 SUPERFAMILY SSF46894 3 91 6.8E-15 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS16210 6da46af73b03a9a1e8e3251ee824d6a0 162 Pfam PF00486 Transcriptional regulatory protein, C terminal 21 90 3.9E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1294 21.454 T 11-11-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 SUPERFAMILY SSF82697 1 148 4.29E-49 T 11-11-2016 S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 SUPERFAMILY SSF56042 429 612 6.73E-53 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 SUPERFAMILY SSF52317 1034 1293 4.98E-100 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 Gene3D G3DSA:3.30.1330.10 642 807 2.4E-14 T 11-11-2016 IPR016188 PurM-like, N-terminal domain S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 Gene3D G3DSA:3.30.1330.10 209 418 1.3E-38 T 11-11-2016 IPR016188 PurM-like, N-terminal domain S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 SUPERFAMILY SSF109736 153 218 2.88E-21 T 11-11-2016 S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 SUPERFAMILY SSF56042 820 1032 7.63E-55 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1292 0.0 T 11-11-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 SMART SM01211 1038 1293 3.6E-159 T 11-11-2016 S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 Gene3D G3DSA:3.40.50.880 1039 1288 1.4E-11 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1038 1291 2.3E-109 T 11-11-2016 S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 SUPERFAMILY SSF55326 219 425 2.69E-62 T 11-11-2016 S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 Pfam PF02769 AIR synthase related protein, C-terminal domain 833 955 5.3E-13 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 Pfam PF02769 AIR synthase related protein, C-terminal domain 429 586 1.1E-28 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain S40542_RS04675 c403d24bfa04879ea8f0dcfb97b81a85 1294 SUPERFAMILY SSF55326 617 813 2.62E-67 T 11-11-2016 S40542_RS20360 1f2deaebeb39d1790979a40d594631c5 330 Gene3D G3DSA:3.40.50.720 151 259 1.3E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20360 1f2deaebeb39d1790979a40d594631c5 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 1.1E-8 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 S40542_RS20360 1f2deaebeb39d1790979a40d594631c5 330 Gene3D G3DSA:3.90.180.10 1 150 1.1E-43 T 11-11-2016 IPR011032 GroES-like S40542_RS20360 1f2deaebeb39d1790979a40d594631c5 330 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 11-11-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 S40542_RS20360 1f2deaebeb39d1790979a40d594631c5 330 SUPERFAMILY SSF51735 119 296 3.08E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20360 1f2deaebeb39d1790979a40d594631c5 330 SMART SM00829 10 326 9.8E-29 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 S40542_RS20360 1f2deaebeb39d1790979a40d594631c5 330 SUPERFAMILY SSF50129 1 153 3.35E-38 T 11-11-2016 IPR011032 GroES-like S40542_RS20360 1f2deaebeb39d1790979a40d594631c5 330 Pfam PF13602 Zinc-binding dehydrogenase 193 326 4.8E-23 T 11-11-2016 S40542_RS20855 a1af3f7550347984d7941b5730752392 376 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 317 370 2.2E-4 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS20855 a1af3f7550347984d7941b5730752392 376 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 9.8E-26 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS20855 a1af3f7550347984d7941b5730752392 376 SUPERFAMILY SSF51735 3 185 1.22E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20855 a1af3f7550347984d7941b5730752392 376 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 11-11-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS20855 a1af3f7550347984d7941b5730752392 376 Gene3D G3DSA:1.10.1040.10 188 282 2.9E-22 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS20855 a1af3f7550347984d7941b5730752392 376 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 184 1.2E-58 T 11-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS20855 a1af3f7550347984d7941b5730752392 376 Gene3D G3DSA:3.40.50.720 3 187 8.1E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20855 a1af3f7550347984d7941b5730752392 376 SUPERFAMILY SSF48179 315 375 4.76E-18 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS20855 a1af3f7550347984d7941b5730752392 376 Gene3D G3DSA:1.10.1040.10 322 375 3.1E-13 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS20855 a1af3f7550347984d7941b5730752392 376 SUPERFAMILY SSF48179 185 296 9.35E-28 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 113 123 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 Gene3D G3DSA:3.40.50.200 38 442 1.7E-55 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 Pfam PF00082 Subtilase family 74 410 1.2E-28 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 79 90 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 Pfam PF01483 Proprotein convertase P-domain 490 576 1.5E-12 T 11-11-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 SUPERFAMILY SSF49785 474 614 7.23E-20 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 SUPERFAMILY SSF52743 38 244 6.81E-51 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 SUPERFAMILY SSF52743 346 442 6.81E-51 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 SUPERFAMILY SSF52743 272 315 6.81E-51 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 354 364 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 Gene3D G3DSA:2.60.120.260 474 613 2.0E-22 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 PRINTS PR00723 Subtilisin serine protease family (S8) signature 109 122 2.3E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 PRINTS PR00723 Subtilisin serine protease family (S8) signature 353 369 2.3E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS02725 4fb8a843dc62edeb169ab74c4da2fee7 623 PRINTS PR00723 Subtilisin serine protease family (S8) signature 74 93 2.3E-16 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS06125 6ec26ebfb56f45c2e1897bc97f87bc96 676 SUPERFAMILY SSF64518 102 483 1.57E-10 T 11-11-2016 S40542_RS06125 6ec26ebfb56f45c2e1897bc97f87bc96 676 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 630 673 3.2E-7 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain S40542_RS06125 6ec26ebfb56f45c2e1897bc97f87bc96 676 PRINTS PR01005 Flagellar hook-associated protein signature 641 665 1.8E-10 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 S40542_RS06125 6ec26ebfb56f45c2e1897bc97f87bc96 676 PRINTS PR01005 Flagellar hook-associated protein signature 170 193 1.8E-10 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 S40542_RS06125 6ec26ebfb56f45c2e1897bc97f87bc96 676 PRINTS PR01005 Flagellar hook-associated protein signature 594 615 1.8E-10 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 S40542_RS06125 6ec26ebfb56f45c2e1897bc97f87bc96 676 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 350 3.7E-54 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 S40542_RS06125 6ec26ebfb56f45c2e1897bc97f87bc96 676 SUPERFAMILY SSF64518 359 673 7.85E-22 T 11-11-2016 S40542_RS16635 6551390522abe928ba776354293046ea 197 Pfam PF06693 Protein of unknown function (DUF1190) 27 195 1.7E-28 T 11-11-2016 IPR009576 Biofilm formation YgiB S40542_RS20740 fa343136cd78ab6a2e4c7f9a544367db 261 SUPERFAMILY SSF52540 2 254 1.76E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20740 fa343136cd78ab6a2e4c7f9a544367db 261 Gene3D G3DSA:3.40.50.300 3 256 1.2E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20740 fa343136cd78ab6a2e4c7f9a544367db 261 Pfam PF13614 AAA domain 3 178 1.4E-62 T 11-11-2016 IPR025669 AAA domain S40542_RS11400 171435d301d8ca96dd4dbe08ca60df7b 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 296 1.6E-9 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS11400 171435d301d8ca96dd4dbe08ca60df7b 391 Gene3D G3DSA:2.40.50.100 176 202 4.0E-16 T 11-11-2016 S40542_RS11400 171435d301d8ca96dd4dbe08ca60df7b 391 Gene3D G3DSA:2.40.50.100 68 101 4.0E-16 T 11-11-2016 S40542_RS11400 171435d301d8ca96dd4dbe08ca60df7b 391 SUPERFAMILY SSF111369 57 301 7.98E-55 T 11-11-2016 S40542_RS11400 171435d301d8ca96dd4dbe08ca60df7b 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 386 3.2E-68 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS07840 d64c61f3477fb40d432a04213c9a5139 155 Pfam PF01661 Macro domain 19 124 1.5E-17 T 11-11-2016 IPR002589 Macro domain S40542_RS07840 d64c61f3477fb40d432a04213c9a5139 155 SMART SM00506 2 134 1.8E-8 T 11-11-2016 IPR002589 Macro domain S40542_RS07840 d64c61f3477fb40d432a04213c9a5139 155 Gene3D G3DSA:3.40.220.10 3 152 1.1E-22 T 11-11-2016 S40542_RS07840 d64c61f3477fb40d432a04213c9a5139 155 SUPERFAMILY SSF52949 3 140 2.69E-28 T 11-11-2016 S40542_RS17215 09bf0eb93ff540598f9cb4f95ef29e6e 221 Pfam PF13508 Acetyltransferase (GNAT) domain 134 194 2.7E-7 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS17215 09bf0eb93ff540598f9cb4f95ef29e6e 221 Gene3D G3DSA:3.40.630.30 12 201 2.6E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS17215 09bf0eb93ff540598f9cb4f95ef29e6e 221 SUPERFAMILY SSF55729 129 200 6.62E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS17215 09bf0eb93ff540598f9cb4f95ef29e6e 221 SUPERFAMILY SSF55729 12 102 6.62E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS07140 c0f3094ab228ec905b1d4c59b814afe2 244 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 149 1.0E-42 T 11-11-2016 IPR023370 TsaA-like domain S40542_RS07140 c0f3094ab228ec905b1d4c59b814afe2 244 Gene3D G3DSA:2.40.30.70 5 158 5.8E-49 T 11-11-2016 IPR023370 TsaA-like domain S40542_RS07140 c0f3094ab228ec905b1d4c59b814afe2 244 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 11-11-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site S40542_RS07140 c0f3094ab228ec905b1d4c59b814afe2 244 SUPERFAMILY SSF118196 3 229 3.53E-79 T 11-11-2016 IPR023370 TsaA-like domain S40542_RS07140 c0f3094ab228ec905b1d4c59b814afe2 244 Pfam PF01980 Uncharacterised protein family UPF0066 21 143 3.2E-39 T 11-11-2016 IPR023370 TsaA-like domain S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 165 2.5E-13 T 11-11-2016 IPR024478 4HB MCP domain S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 Gene3D G3DSA:1.10.287.950 283 497 1.8E-53 T 11-11-2016 S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 528 2.9E-41 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 6.1E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 6.1E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 176 196 6.1E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 Pfam PF00672 HAMP domain 181 248 1.3E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 SUPERFAMILY SSF58104 221 529 3.79E-72 T 11-11-2016 S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 SMART SM00304 200 253 2.5E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS10040 6bc383792de54c835ad26ad440908d18 530 SMART SM00283 268 529 7.7E-62 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SMART SM00304 686 738 3.8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SMART SM00304 415 468 3.2E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SMART SM00304 596 648 3.8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SMART SM00304 506 558 2.8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SMART SM00304 776 828 7.1 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SUPERFAMILY SSF58104 520 649 7.32E-5 T 11-11-2016 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SUPERFAMILY SSF58104 436 470 7.32E-5 T 11-11-2016 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 885 1075 2.5E-46 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SMART SM00283 829 1076 2.3E-61 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 Pfam PF00672 HAMP domain 396 464 4.3E-16 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SUPERFAMILY SSF58104 797 1077 1.44E-57 T 11-11-2016 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 SUPERFAMILY SSF158472 415 464 1.96E-6 T 11-11-2016 S40542_RS00570 09ddb82b5507009e7fa99681c6b2477d 1102 Gene3D G3DSA:1.10.287.950 843 1048 4.0E-48 T 11-11-2016 S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 Pfam PF03466 LysR substrate binding domain 91 278 1.0E-8 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.4E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 Gene3D G3DSA:1.10.10.10 1 79 6.3E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 SUPERFAMILY SSF46785 1 81 1.95E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 Gene3D G3DSA:3.40.190.10 84 152 9.0E-4 T 11-11-2016 S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS04305 9469fb347f14795023a158b7e16f9179 282 SUPERFAMILY SSF53850 88 280 1.16E-15 T 11-11-2016 S40542_RS08350 adf67f761781c46fa4f6b54be9f55bc6 203 Pfam PF00589 Phage integrase family 29 186 9.1E-17 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS08350 adf67f761781c46fa4f6b54be9f55bc6 203 SUPERFAMILY SSF56349 18 200 5.89E-32 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS08350 adf67f761781c46fa4f6b54be9f55bc6 203 Gene3D G3DSA:1.10.443.10 25 198 9.9E-26 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS12165 62c2854038178eeaac33d84646a5fab7 202 Pfam PF03942 DTW domain 3 185 4.8E-38 T 11-11-2016 IPR005636 DTW S40542_RS12165 62c2854038178eeaac33d84646a5fab7 202 SMART SM01144 2 190 5.4E-46 T 11-11-2016 IPR005636 DTW S40542_RS02450 c4a64abce260f9d363559b156b75858d 304 SMART SM00382 42 196 2.3E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS02450 c4a64abce260f9d363559b156b75858d 304 Pfam PF13401 AAA domain 43 172 4.0E-23 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS02450 c4a64abce260f9d363559b156b75858d 304 SUPERFAMILY SSF52540 5 264 2.72E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02450 c4a64abce260f9d363559b156b75858d 304 Gene3D G3DSA:3.40.50.300 27 185 1.3E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17570 883409fb22b6752402b70d935ec0d5bf 404 Gene3D G3DSA:3.20.20.190 60 394 2.6E-58 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 S40542_RS17570 883409fb22b6752402b70d935ec0d5bf 404 SUPERFAMILY SSF51695 60 395 3.14E-61 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 S40542_RS17570 883409fb22b6752402b70d935ec0d5bf 404 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 62 392 5.7E-21 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 S40542_RS17275 fb77b5a547822a967aaf2d30242a394d 101 Gene3D G3DSA:4.10.430.10 67 100 2.6E-7 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 S40542_RS17275 fb77b5a547822a967aaf2d30242a394d 101 Pfam PF00816 H-NS histone family 18 93 1.6E-14 T 11-11-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 S40542_RS17275 fb77b5a547822a967aaf2d30242a394d 101 SMART SM00528 60 101 6.5E-7 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 S40542_RS17275 fb77b5a547822a967aaf2d30242a394d 101 SUPERFAMILY SSF81273 62 97 3.53E-5 T 11-11-2016 S40542_RS03165 f90152780c4b7e2507a77e842bd2799a 558 Gene3D G3DSA:3.40.50.300 290 556 2.6E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03165 f90152780c4b7e2507a77e842bd2799a 558 SUPERFAMILY SSF52540 157 556 1.44E-96 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03165 f90152780c4b7e2507a77e842bd2799a 558 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 377 391 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 S40542_RS03165 f90152780c4b7e2507a77e842bd2799a 558 Gene3D G3DSA:3.30.450.90 158 282 6.8E-55 T 11-11-2016 S40542_RS03165 f90152780c4b7e2507a77e842bd2799a 558 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 45 141 1.2E-12 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 S40542_RS03165 f90152780c4b7e2507a77e842bd2799a 558 SUPERFAMILY SSF160246 4 137 5.75E-23 T 11-11-2016 S40542_RS03165 f90152780c4b7e2507a77e842bd2799a 558 Pfam PF00437 Type II/IV secretion system protein 182 449 9.0E-90 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 S40542_RS03165 f90152780c4b7e2507a77e842bd2799a 558 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 24 557 1.2E-247 T 11-11-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 S40542_RS07435 2ba50f295d25e1c1bb56327cf7a1fd31 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 260 1.5E-22 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS07435 2ba50f295d25e1c1bb56327cf7a1fd31 273 Gene3D G3DSA:3.40.190.10 224 259 2.3E-20 T 11-11-2016 S40542_RS07435 2ba50f295d25e1c1bb56327cf7a1fd31 273 Gene3D G3DSA:3.40.190.10 24 114 2.3E-20 T 11-11-2016 S40542_RS07435 2ba50f295d25e1c1bb56327cf7a1fd31 273 Gene3D G3DSA:3.40.190.10 115 203 1.5E-4 T 11-11-2016 S40542_RS07435 2ba50f295d25e1c1bb56327cf7a1fd31 273 SMART SM00062 25 262 3.9E-5 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS07435 2ba50f295d25e1c1bb56327cf7a1fd31 273 SUPERFAMILY SSF53850 27 260 7.6E-37 T 11-11-2016 S40542_RS15800 d83552e0c0bd01516245d19edbeaf55a 254 SUPERFAMILY SSF75217 7 251 4.19E-103 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS15800 d83552e0c0bd01516245d19edbeaf55a 254 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 7 240 1.2E-106 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 S40542_RS15800 d83552e0c0bd01516245d19edbeaf55a 254 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 254 117.56 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 S40542_RS15800 d83552e0c0bd01516245d19edbeaf55a 254 Gene3D G3DSA:3.40.1280.10 7 166 1.2E-67 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS15800 d83552e0c0bd01516245d19edbeaf55a 254 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 29 227 3.1E-68 T 11-11-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 S40542_RS15800 d83552e0c0bd01516245d19edbeaf55a 254 PIRSF PIRSF000386 7 253 1.7E-101 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 S40542_RS15800 d83552e0c0bd01516245d19edbeaf55a 254 Gene3D G3DSA:1.10.1270.20 167 250 4.4E-37 T 11-11-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 S40542_RS16240 d90ae42a3eec14558600db9bba1cb243 457 SUPERFAMILY SSF51690 168 455 3.34E-46 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 S40542_RS16240 d90ae42a3eec14558600db9bba1cb243 457 PIRSF PIRSF005943 1 457 4.8E-190 T 11-11-2016 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 S40542_RS16240 d90ae42a3eec14558600db9bba1cb243 457 Gene3D G3DSA:3.20.140.10 124 384 2.0E-9 T 11-11-2016 S40542_RS16240 d90ae42a3eec14558600db9bba1cb243 457 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 441 3.0E-70 T 11-11-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 S40542_RS09005 38442d0c5e9ca6bc801a9203c56133d2 280 SUPERFAMILY SSF51197 2 276 1.26E-59 T 11-11-2016 S40542_RS09005 38442d0c5e9ca6bc801a9203c56133d2 280 Gene3D G3DSA:2.60.120.330 2 262 5.2E-57 T 11-11-2016 IPR027443 Isopenicillin N synthase-like S40542_RS09005 38442d0c5e9ca6bc801a9203c56133d2 280 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 153 254 2.0E-16 T 11-11-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 S40542_RS09005 38442d0c5e9ca6bc801a9203c56133d2 280 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 8.7E-11 T 11-11-2016 IPR026992 Non-haem dioxygenase N-terminal domain S40542_RS09775 202ef93ade75f1de5bbbc7ebe744bbbc 208 PIRSF PIRSF006324 1 208 9.8E-55 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS09775 202ef93ade75f1de5bbbc7ebe744bbbc 208 Pfam PF01810 LysE type translocator 15 206 1.5E-32 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS07955 a8e8fb230ddf6921b3c0404a3463918e 137 Pfam PF03203 MerC mercury resistance protein 10 128 5.3E-27 T 11-11-2016 IPR004891 MerC mercury resistance protein S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 SUPERFAMILY SSF52402 196 419 1.98E-57 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 SUPERFAMILY SSF52317 8 236 1.13E-57 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 211 524 1.3E-153 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 204 7.9E-83 T 11-11-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 Gene3D G3DSA:3.40.50.620 222 398 9.8E-57 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 Pfam PF00958 GMP synthase C terminal domain 432 523 2.8E-42 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 Pfam PF00117 Glutamine amidotransferase class-I 12 199 4.4E-40 T 11-11-2016 IPR017926 Glutamine amidotransferase S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 Gene3D G3DSA:3.30.300.10 400 524 1.4E-51 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 SUPERFAMILY SSF54810 404 524 1.27E-49 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.3E-6 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.3E-6 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.3E-6 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 7.8E-8 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 7.8E-8 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 176 189 7.8E-8 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 Gene3D G3DSA:3.40.50.880 6 221 2.2E-61 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 Pfam PF02540 NAD synthase 214 291 7.3E-8 T 11-11-2016 IPR022310 NAD/GMP synthase S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 524 55.747 T 11-11-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00097 Anthranilate synthase component II signature 81 92 9.2E-7 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00097 Anthranilate synthase component II signature 176 189 9.2E-7 T 11-11-2016 S40542_RS02335 acc5d6f16fcd5b9e7ed68c5ece1c950a 524 PRINTS PR00097 Anthranilate synthase component II signature 54 63 9.2E-7 T 11-11-2016 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Gene3D G3DSA:3.40.50.300 206 343 5.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Pfam PF00270 DEAD/DEAH box helicase 28 184 2.1E-17 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Pfam PF00570 HRDC domain 531 597 2.7E-22 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 SMART SM00341 527 604 4.6E-19 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Pfam PF09382 RQC domain 405 515 4.3E-38 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 SMART SM00487 21 217 3.1E-25 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Gene3D G3DSA:1.10.150.80 528 601 3.2E-25 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Gene3D G3DSA:1.10.10.10 344 513 2.1E-61 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 SUPERFAMILY SSF52540 207 454 1.24E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 SMART SM00490 249 330 1.5E-29 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 SUPERFAMILY SSF52540 13 201 2.33E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 SMART SM00956 410 513 2.7E-48 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Pfam PF16124 RecQ zinc-binding 342 403 2.5E-16 T 11-11-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 SUPERFAMILY SSF47819 527 601 5.05E-26 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Gene3D G3DSA:3.40.50.300 13 202 4.6E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 Pfam PF00271 Helicase conserved C-terminal domain 224 330 8.0E-19 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 14 463 1.1E-184 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 S40542_RS04285 c2fe479c063be3dceca4ba5469ff2e2a 604 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 600 2.0E-248 T 11-11-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 S40542_RS04560 465a63bdfee59fbda83a89da7208059b 374 Pfam PF00437 Type II/IV secretion system protein 12 268 8.3E-39 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 S40542_RS04560 465a63bdfee59fbda83a89da7208059b 374 SMART SM00382 121 246 8.8E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS04560 465a63bdfee59fbda83a89da7208059b 374 Gene3D G3DSA:3.40.50.300 101 343 2.9E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04560 465a63bdfee59fbda83a89da7208059b 374 SUPERFAMILY SSF52540 5 335 9.55E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04560 465a63bdfee59fbda83a89da7208059b 374 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 7.8E-128 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 S40542_RS13305 6b26f59f461866b956f733fd211adfad 240 SUPERFAMILY SSF51735 2 239 7.63E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13305 6b26f59f461866b956f733fd211adfad 240 Gene3D G3DSA:3.40.50.720 2 239 2.7E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13305 6b26f59f461866b956f733fd211adfad 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13305 6b26f59f461866b956f733fd211adfad 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.8E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13305 6b26f59f461866b956f733fd211adfad 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.8E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13305 6b26f59f461866b956f733fd211adfad 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.8E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13305 6b26f59f461866b956f733fd211adfad 240 Pfam PF00106 short chain dehydrogenase 3 186 3.6E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 SMART SM00267 393 578 3.4E-7 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 409 499 1.6E-14 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 Gene3D G3DSA:3.20.20.450 7 241 5.9E-55 T 11-11-2016 IPR001633 EAL domain S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 Pfam PF00571 CBS domain 341 395 0.0069 T 11-11-2016 IPR000644 CBS domain S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 Pfam PF00563 EAL domain 10 237 7.4E-51 T 11-11-2016 IPR001633 EAL domain S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 Pfam PF00990 Diguanylate cyclase, GGDEF domain 408 502 4.3E-15 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 SUPERFAMILY SSF54631 274 399 1.52E-11 T 11-11-2016 S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 SUPERFAMILY SSF55073 409 577 1.57E-21 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 SMART SM00052 2 242 3.0E-33 T 11-11-2016 IPR001633 EAL domain S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 Gene3D G3DSA:3.30.70.270 407 578 4.2E-24 T 11-11-2016 S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 SUPERFAMILY SSF141868 8 241 1.19E-60 T 11-11-2016 IPR001633 EAL domain S40542_RS18125 e34940357132fdd1f5c576e281b318fb 598 Gene3D G3DSA:3.10.580.10 276 398 4.4E-10 T 11-11-2016 S40542_RS09375 7b4c97c4804286483d0c1515ff93f9f3 740 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 738 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 S40542_RS09375 7b4c97c4804286483d0c1515ff93f9f3 740 Gene3D G3DSA:3.40.718.10 184 286 5.4E-34 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 S40542_RS09375 7b4c97c4804286483d0c1515ff93f9f3 740 Gene3D G3DSA:3.40.718.10 537 644 5.4E-34 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 S40542_RS09375 7b4c97c4804286483d0c1515ff93f9f3 740 Gene3D G3DSA:3.40.718.10 338 361 5.4E-34 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 S40542_RS09375 7b4c97c4804286483d0c1515ff93f9f3 740 PIRSF PIRSF009407 1 740 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 S40542_RS09375 7b4c97c4804286483d0c1515ff93f9f3 740 SUPERFAMILY SSF53659 3 737 0.0 T 11-11-2016 S40542_RS09375 7b4c97c4804286483d0c1515ff93f9f3 740 Pfam PF03971 Monomeric isocitrate dehydrogenase 4 736 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 645 2.7E-30 T 11-11-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1363 10.473 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Gene3D G3DSA:2.40.50.100 1143 1196 5.8E-8 T 11-11-2016 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Gene3D G3DSA:2.40.50.100 977 1013 9.8E-4 T 11-11-2016 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Gene3D G3DSA:2.40.40.20 349 376 3.3E-37 T 11-11-2016 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Gene3D G3DSA:2.40.40.20 417 489 3.3E-37 T 11-11-2016 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 764 3.0E-18 T 11-11-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1301 4.0E-76 T 11-11-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 SMART SM00663 235 514 2.4E-184 T 11-11-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1017 0.0 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.6E-84 T 11-11-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Pfam PF00623 RNA polymerase Rpb1, domain 2 388 485 6.3E-28 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 381 1.7E-7 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 SUPERFAMILY SSF64484 16 945 0.0 T 11-11-2016 S40542_RS19530 f9f23bf7f92375d39210ac73e7339983 1393 SUPERFAMILY SSF64484 1120 1355 0.0 T 11-11-2016 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 SUPERFAMILY SSF51055 18 79 2.22E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 Pfam PF00704 Glycosyl hydrolases family 18 525 825 1.5E-24 T 11-11-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 SMART SM00636 523 825 2.3E-4 T 11-11-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 11-11-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 Gene3D G3DSA:2.10.10.20 27 80 1.2E-10 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 SUPERFAMILY SSF51445 522 833 2.23E-47 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 Gene3D G3DSA:3.20.20.80 522 834 2.3E-56 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 Pfam PF02839 Carbohydrate binding domain 33 73 2.3E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 SMART SM00495 30 76 7.2E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS15695 11975e3fa577d11a88dd0f9abe009c0e 847 SMART SM00495 276 325 1.8E-5 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS08010 41f0f1b9d775e48f5bd1e4ddba81f39c 404 SUPERFAMILY SSF53092 16 167 3.31E-19 T 11-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal S40542_RS08010 41f0f1b9d775e48f5bd1e4ddba81f39c 404 Gene3D G3DSA:3.40.350.10 16 149 2.6E-20 T 11-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal S40542_RS08010 41f0f1b9d775e48f5bd1e4ddba81f39c 404 Pfam PF00557 Metallopeptidase family M24 177 383 5.1E-52 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS08010 41f0f1b9d775e48f5bd1e4ddba81f39c 404 Pfam PF01321 Creatinase/Prolidase N-terminal domain 34 168 4.5E-14 T 11-11-2016 IPR000587 Creatinase, N-terminal GO:0016787 S40542_RS08010 41f0f1b9d775e48f5bd1e4ddba81f39c 404 Gene3D G3DSA:3.90.230.10 169 395 1.7E-64 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS08010 41f0f1b9d775e48f5bd1e4ddba81f39c 404 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 329 341 - T 11-11-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site S40542_RS08010 41f0f1b9d775e48f5bd1e4ddba81f39c 404 SUPERFAMILY SSF55920 168 396 3.4E-67 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 Gene3D G3DSA:3.30.450.40 219 403 8.8E-17 T 11-11-2016 IPR029016 GAF domain-like S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 SUPERFAMILY SSF55073 443 601 2.16E-46 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 Gene3D G3DSA:3.30.450.40 28 193 6.2E-19 T 11-11-2016 IPR029016 GAF domain-like S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 Gene3D G3DSA:3.30.70.270 439 604 9.0E-54 T 11-11-2016 S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 Gene3D G3DSA:3.20.20.450 650 813 1.3E-6 T 11-11-2016 IPR001633 EAL domain S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 Pfam PF00990 Diguanylate cyclase, GGDEF domain 438 595 1.5E-48 T 11-11-2016 IPR000160 GGDEF domain S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 SMART SM00267 427 600 1.9E-60 T 11-11-2016 IPR000160 GGDEF domain S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 Pfam PF13185 GAF domain 55 190 4.3E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 Pfam PF13185 GAF domain 245 387 3.5E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 Pfam PF00563 EAL domain 667 813 2.4E-9 T 11-11-2016 IPR001633 EAL domain S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 598 4.6E-40 T 11-11-2016 IPR000160 GGDEF domain S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 SUPERFAMILY SSF141868 642 813 3.66E-9 T 11-11-2016 IPR001633 EAL domain S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 SMART SM00052 597 840 0.0011 T 11-11-2016 IPR001633 EAL domain S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 SUPERFAMILY SSF55781 19 191 5.67E-19 T 11-11-2016 IPR029016 GAF domain-like S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 SUPERFAMILY SSF55781 225 389 4.36E-16 T 11-11-2016 IPR029016 GAF domain-like S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 SMART SM00065 48 199 0.02 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS01505 82ea7baec9d9ade9a4c2121d989d8569 856 SMART SM00065 245 396 2.4E-4 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS15620 afe3ac91c900b885ec8fd8637cb31fd5 316 Pfam PF03888 MucB/RseB N-terminal domain 24 197 7.3E-52 T 11-11-2016 IPR033434 MucB/RseB, N-terminal S40542_RS15620 afe3ac91c900b885ec8fd8637cb31fd5 316 Pfam PF17188 MucB/RseB C-terminal domain 217 313 1.3E-27 T 11-11-2016 IPR033436 MucB/RseB, C-terminal S40542_RS15620 afe3ac91c900b885ec8fd8637cb31fd5 316 PIRSF PIRSF005427 1 315 3.1E-92 T 11-11-2016 IPR005588 MucB/RseB S40542_RS15620 afe3ac91c900b885ec8fd8637cb31fd5 316 Gene3D G3DSA:2.50.20.10 115 187 8.9E-6 T 11-11-2016 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 SUPERFAMILY SSF50249 640 720 1.29E-20 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 SMART SM00955 261 589 8.4E-180 T 11-11-2016 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 Pfam PF08206 Ribonuclease B OB domain 88 145 5.6E-18 T 11-11-2016 IPR013223 Ribonuclease B, N-terminal OB domain S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 SUPERFAMILY SSF50249 139 236 3.9E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 Gene3D G3DSA:2.40.50.140 640 722 1.3E-20 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 SMART SM00357 87 146 6.1E-11 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 Hamap MF_01895 Ribonuclease R [rnr]. 39 721 55.724 T 11-11-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 SMART SM00316 638 721 3.6E-14 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 Pfam PF00773 RNB domain 261 588 6.5E-109 T 11-11-2016 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 SUPERFAMILY SSF50249 221 638 1.03E-143 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 72 718 4.0E-248 T 11-11-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 Pfam PF00575 S1 RNA binding domain 638 718 1.3E-13 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 ProSitePatterns PS01175 Ribonuclease II family signature. 556 580 - T 11-11-2016 IPR022966 Ribonuclease II/R, conserved site S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 721 2.8E-262 T 11-11-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 S40542_RS19375 8065c39296db4fe378274e97edce4d23 830 SUPERFAMILY SSF50249 68 147 2.76E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 PIRSF PIRSF039144 1 112 2.7E-56 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 SMART SM00938 4 105 8.5E-67 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 PRINTS PR00340 P-II protein signature 52 75 1.6E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 PRINTS PR00340 P-II protein signature 23 41 1.6E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 PRINTS PR00340 P-II protein signature 2 17 1.6E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 PRINTS PR00340 P-II protein signature 83 103 1.6E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 SUPERFAMILY SSF54913 1 112 6.04E-46 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 Gene3D G3DSA:3.30.70.120 1 112 1.7E-51 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal S40542_RS15890 129ce80e3fd3b76c08f0ac5e6d60e4d3 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.2E-44 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Gene3D G3DSA:3.90.640.10 235 297 2.1E-17 T 11-11-2016 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 SUPERFAMILY SSF53067 198 377 1.92E-49 T 11-11-2016 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Gene3D G3DSA:3.30.1490.110 89 167 1.1E-14 T 11-11-2016 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Gene3D G3DSA:3.30.420.40 3 88 1.8E-21 T 11-11-2016 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Gene3D G3DSA:3.30.420.40 168 208 1.8E-21 T 11-11-2016 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.0E-30 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Gene3D G3DSA:3.30.420.40 209 234 3.9E-34 T 11-11-2016 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Gene3D G3DSA:3.30.420.40 298 352 3.9E-34 T 11-11-2016 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 1.9E-149 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 SUPERFAMILY SSF53067 9 197 3.89E-53 T 11-11-2016 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 PIRSF PIRSF003101 1 410 1.4E-149 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 410 29.62 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 SMART SM00842 10 196 1.4E-95 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 S40542_RS18720 d4b671bd7a63537c5f069af01aaf43b4 410 Pfam PF14450 Cell division protein FtsA 207 374 1.7E-24 T 11-11-2016 S40542_RS15880 492e7db39b19ea681b629472fa88c78e 325 Pfam PF01479 S4 domain 19 64 1.4E-7 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS15880 492e7db39b19ea681b629472fa88c78e 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.3E-31 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS15880 492e7db39b19ea681b629472fa88c78e 325 SUPERFAMILY SSF55120 77 317 1.3E-77 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS15880 492e7db39b19ea681b629472fa88c78e 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 314 1.3E-103 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS15880 492e7db39b19ea681b629472fa88c78e 325 SMART SM00363 18 81 8.6E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS15880 492e7db39b19ea681b629472fa88c78e 325 Gene3D G3DSA:3.10.290.10 19 69 2.7E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS15880 492e7db39b19ea681b629472fa88c78e 325 SUPERFAMILY SSF55174 18 69 1.31E-9 T 11-11-2016 S40542_RS15880 492e7db39b19ea681b629472fa88c78e 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 54 5.8E-11 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 Gene3D G3DSA:1.10.155.10 5 74 4.3E-12 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 270 1.4E-62 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 SUPERFAMILY SSF53335 76 270 5.57E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 Gene3D G3DSA:3.40.50.150 75 271 5.4E-61 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 1.7E-39 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 1.7E-39 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.7E-39 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.7E-39 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 1.7E-39 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.7E-39 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 SMART SM00138 8 273 3.2E-102 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS16645 1d18949839e1bbb8d10f6c412c8c22a9 277 SUPERFAMILY SSF47757 5 75 3.14E-15 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS06500 d84a3cf82ee5b2988909563f8ec08fb3 101 Gene3D G3DSA:3.40.710.10 14 98 1.0E-11 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS06500 d84a3cf82ee5b2988909563f8ec08fb3 101 SUPERFAMILY SSF56601 26 98 7.89E-12 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS06500 d84a3cf82ee5b2988909563f8ec08fb3 101 Pfam PF00144 Beta-lactamase 39 97 5.6E-9 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 SUPERFAMILY SSF52096 20 201 1.12E-74 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 44.309 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 11-11-2016 IPR018215 ClpP, Ser active site S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 Pfam PF00574 Clp protease 22 201 2.5E-89 T 11-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 198 1.8E-105 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 Gene3D G3DSA:3.90.226.10 12 199 5.6E-91 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 1.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 1.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 1.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 1.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 1.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 S40542_RS16890 09fa911c8376332ee1fb23825810c82a 202 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 11-11-2016 IPR033135 ClpP, histidine active site S40542_RS15490 d83c925b240d24ea8b8d2f2aa4429daa 522 SUPERFAMILY SSF51735 388 518 8.18E-17 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15490 d83c925b240d24ea8b8d2f2aa4429daa 522 Pfam PF00999 Sodium/hydrogen exchanger family 6 349 1.2E-38 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 S40542_RS15490 d83c925b240d24ea8b8d2f2aa4429daa 522 Gene3D G3DSA:3.40.50.720 382 520 2.6E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15490 d83c925b240d24ea8b8d2f2aa4429daa 522 Pfam PF02254 TrkA-N domain 389 502 1.0E-18 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 S40542_RS18545 c2984a7e32734836b543ecd8d7bc3d1b 322 SUPERFAMILY SSF51735 8 315 1.03E-75 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18545 c2984a7e32734836b543ecd8d7bc3d1b 322 Gene3D G3DSA:3.90.25.10 185 300 9.7E-19 T 11-11-2016 S40542_RS18545 c2984a7e32734836b543ecd8d7bc3d1b 322 Gene3D G3DSA:3.40.50.720 4 184 5.4E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18545 c2984a7e32734836b543ecd8d7bc3d1b 322 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 280 9.4E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13870 30035c3096fe825de95893d4505361af 131 SUPERFAMILY SSF46955 10 121 4.03E-24 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS13870 30035c3096fe825de95893d4505361af 131 Gene3D G3DSA:1.10.1660.10 63 125 7.7E-14 T 11-11-2016 S40542_RS13870 30035c3096fe825de95893d4505361af 131 Pfam PF13411 MerR HTH family regulatory protein 10 74 2.7E-16 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13870 30035c3096fe825de95893d4505361af 131 SMART SM00422 10 77 2.7E-17 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13870 30035c3096fe825de95893d4505361af 131 Gene3D G3DSA:1.10.1660.10 7 62 9.8E-21 T 11-11-2016 S40542_RS16865 43c1fbdaf7e3deead7bf6994b7aaa1a5 253 Pfam PF00005 ABC transporter 29 178 7.6E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS16865 43c1fbdaf7e3deead7bf6994b7aaa1a5 253 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS16865 43c1fbdaf7e3deead7bf6994b7aaa1a5 253 Gene3D G3DSA:3.40.50.300 2 251 8.7E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16865 43c1fbdaf7e3deead7bf6994b7aaa1a5 253 SMART SM00382 38 228 1.9E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS16865 43c1fbdaf7e3deead7bf6994b7aaa1a5 253 SUPERFAMILY SSF52540 4 249 9.94E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 Pfam PF07840 FadR C-terminal domain 73 235 6.3E-68 T 11-11-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 SMART SM00345 13 72 1.1E-23 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 237 147.059 T 11-11-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 SUPERFAMILY SSF46785 11 76 2.84E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 6.7E-21 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 Gene3D G3DSA:1.10.10.10 13 77 3.3E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 Gene3D G3DSA:1.20.120.530 81 236 1.8E-52 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.7E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.7E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 3 236 4.7E-118 T 11-11-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 S40542_RS15730 719c6b85b4de36aca47a3c7489cb222f 237 SUPERFAMILY SSF48008 80 230 1.96E-55 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 212 273 2.1E-20 T 11-11-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 Gene3D G3DSA:3.30.460.10 35 183 4.5E-47 T 11-11-2016 S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 18 451 37.106 T 11-11-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 SUPERFAMILY SSF81301 25 182 2.4E-38 T 11-11-2016 S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 Gene3D G3DSA:1.10.3090.10 184 418 2.8E-46 T 11-11-2016 S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 449 9.3E-162 T 11-11-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 328 448 1.1E-36 T 11-11-2016 IPR025866 Polymerase A arginine-rich C-terminal domain S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 SUPERFAMILY SSF81891 183 419 3.92E-47 T 11-11-2016 S40542_RS03630 a027b934d36c6d07c314840f8d306f91 453 Pfam PF01743 Poly A polymerase head domain 54 184 1.6E-37 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 S40542_RS00290 4ca456b0fd8ce829d7ece7c07ee99dfc 138 SUPERFAMILY SSF54975 1 137 4.07E-35 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 S40542_RS00290 4ca456b0fd8ce829d7ece7c07ee99dfc 138 SMART SM01034 1 94 2.3E-30 T 11-11-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 S40542_RS00290 4ca456b0fd8ce829d7ece7c07ee99dfc 138 Pfam PF04940 Sensors of blue-light using FAD 1 93 1.9E-28 T 11-11-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 S40542_RS20380 1713e319aae843104424e68b30b7d101 398 SUPERFAMILY SSF46689 346 394 2.2E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS20380 1713e319aae843104424e68b30b7d101 398 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 346 388 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS20380 1713e319aae843104424e68b30b7d101 398 Pfam PF12833 Helix-turn-helix domain 315 394 1.9E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS20380 1713e319aae843104424e68b30b7d101 398 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 376 392 9.1E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS20380 1713e319aae843104424e68b30b7d101 398 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 361 376 9.1E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS20380 1713e319aae843104424e68b30b7d101 398 Gene3D G3DSA:1.10.10.60 345 395 1.3E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS20380 1713e319aae843104424e68b30b7d101 398 SMART SM00342 309 392 4.6E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 SUPERFAMILY SSF55874 296 426 9.82E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 SUPERFAMILY SSF47384 213 284 2.55E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 SMART SM00387 321 428 5.9E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 Gene3D G3DSA:3.30.565.10 315 425 3.8E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 425 4.9E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 2.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 2.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 2.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS11185 2af3742f1759dca6c7e5cde770bee3de 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 2.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS14185 07129584ede09a277b0c0cca867a0b59 282 SMART SM00481 4 71 9.6E-21 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 S40542_RS14185 07129584ede09a277b0c0cca867a0b59 282 Pfam PF02811 PHP domain 5 90 8.3E-9 T 11-11-2016 IPR004013 PHP domain GO:0003824 S40542_RS14185 07129584ede09a277b0c0cca867a0b59 282 Gene3D G3DSA:3.20.20.140 2 89 4.2E-43 T 11-11-2016 S40542_RS14185 07129584ede09a277b0c0cca867a0b59 282 Gene3D G3DSA:3.20.20.140 158 269 4.2E-43 T 11-11-2016 S40542_RS14185 07129584ede09a277b0c0cca867a0b59 282 SUPERFAMILY SSF89550 166 276 8.24E-52 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 S40542_RS14185 07129584ede09a277b0c0cca867a0b59 282 SUPERFAMILY SSF89550 2 84 8.24E-52 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 S40542_RS14190 95956d64570be208855760b955126258 526 PIRSF PIRSF001373 4 524 5.3E-246 T 11-11-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14190 95956d64570be208855760b955126258 526 SUPERFAMILY SSF56322 13 516 1.31E-143 T 11-11-2016 IPR005801 ADC synthase GO:0009058 S40542_RS14190 95956d64570be208855760b955126258 526 PRINTS PR00095 Anthranilate synthase component I signature 369 382 4.8E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14190 95956d64570be208855760b955126258 526 PRINTS PR00095 Anthranilate synthase component I signature 449 463 4.8E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14190 95956d64570be208855760b955126258 526 PRINTS PR00095 Anthranilate synthase component I signature 355 368 4.8E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14190 95956d64570be208855760b955126258 526 PRINTS PR00095 Anthranilate synthase component I signature 464 478 4.8E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14190 95956d64570be208855760b955126258 526 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 517 3.6E-212 T 11-11-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14190 95956d64570be208855760b955126258 526 Pfam PF00425 chorismate binding enzyme 247 507 9.1E-85 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal S40542_RS14190 95956d64570be208855760b955126258 526 Gene3D G3DSA:3.60.120.10 13 516 8.0E-152 T 11-11-2016 IPR005801 ADC synthase GO:0009058 S40542_RS14190 95956d64570be208855760b955126258 526 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 194 1.2E-21 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS02985 e675ef8b9f270dc944a1d7c05d7ddd26 685 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 196 284 3.3E-12 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 S40542_RS02985 e675ef8b9f270dc944a1d7c05d7ddd26 685 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 50 154 8.6E-5 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 S40542_RS02985 e675ef8b9f270dc944a1d7c05d7ddd26 685 Gene3D G3DSA:2.130.10.10 33 403 3.8E-54 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS02985 e675ef8b9f270dc944a1d7c05d7ddd26 685 SUPERFAMILY SSF82171 42 416 3.14E-47 T 11-11-2016 S40542_RS02985 e675ef8b9f270dc944a1d7c05d7ddd26 685 SUPERFAMILY SSF53474 427 680 1.05E-67 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02985 e675ef8b9f270dc944a1d7c05d7ddd26 685 Pfam PF00326 Prolyl oligopeptidase family 473 680 3.3E-54 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS02985 e675ef8b9f270dc944a1d7c05d7ddd26 685 Gene3D G3DSA:3.40.50.1820 426 680 7.4E-67 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 9.4E-53 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 SUPERFAMILY SSF48179 163 294 1.36E-42 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 11-11-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 Gene3D G3DSA:3.40.50.720 1 163 1.0E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 SUPERFAMILY SSF51735 2 163 5.09E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 PIRSF PIRSF000103 1 296 3.4E-85 T 11-11-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 2.1E-36 T 11-11-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 Gene3D G3DSA:1.10.1040.10 165 294 4.7E-47 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS13840 1591ff0a5c3444165c9278a8dd36d614 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 2.0E-127 T 11-11-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 S40542_RS03620 12d51397733f5341123776cad374fb09 264 Gene3D G3DSA:3.20.20.60 2 263 7.5E-112 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS03620 12d51397733f5341123776cad374fb09 264 PIRSF PIRSF000388 1 264 2.6E-102 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 S40542_RS03620 12d51397733f5341123776cad374fb09 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 1.3E-108 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 S40542_RS03620 12d51397733f5341123776cad374fb09 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 1.9E-113 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 S40542_RS03620 12d51397733f5341123776cad374fb09 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.074 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 S40542_RS03620 12d51397733f5341123776cad374fb09 264 SUPERFAMILY SSF51621 4 263 3.65E-106 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS02315 f34839d5dcc00b1d28fe3b54a7be1fbb 273 SMART SM00971 5 109 1.6E-56 T 11-11-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 S40542_RS02315 f34839d5dcc00b1d28fe3b54a7be1fbb 273 Gene3D G3DSA:1.10.3130.10 3 131 6.5E-48 T 11-11-2016 S40542_RS02315 f34839d5dcc00b1d28fe3b54a7be1fbb 273 Pfam PF06426 Serine acetyltransferase, N-terminal 5 109 1.8E-36 T 11-11-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 S40542_RS02315 f34839d5dcc00b1d28fe3b54a7be1fbb 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 189 223 2.5E-8 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS02315 f34839d5dcc00b1d28fe3b54a7be1fbb 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 78 238 1.0E-71 T 11-11-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 S40542_RS02315 f34839d5dcc00b1d28fe3b54a7be1fbb 273 Gene3D G3DSA:2.160.10.10 132 242 2.8E-31 T 11-11-2016 S40542_RS02315 f34839d5dcc00b1d28fe3b54a7be1fbb 273 SUPERFAMILY SSF51161 4 251 9.98E-61 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS02315 f34839d5dcc00b1d28fe3b54a7be1fbb 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 198 226 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 PRINTS PR00298 60kDa chaperonin signature 212 235 3.1E-58 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 PRINTS PR00298 60kDa chaperonin signature 26 53 3.1E-58 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 PRINTS PR00298 60kDa chaperonin signature 294 319 3.1E-58 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 PRINTS PR00298 60kDa chaperonin signature 342 362 3.1E-58 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 ProSitePatterns PS00296 Chaperonins cpn60 signature. 349 360 - T 11-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 Pfam PF00118 TCP-1/cpn60 chaperonin family 1 361 6.0E-56 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 Gene3D G3DSA:3.50.7.10 141 323 4.3E-94 T 11-11-2016 IPR027409 GroEL-like apical domain S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 SUPERFAMILY SSF52029 128 320 5.93E-84 T 11-11-2016 IPR027409 GroEL-like apical domain S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 TIGRFAM TIGR02348 GroEL: chaperonin GroL 1 362 7.6E-183 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 SUPERFAMILY SSF48592 1 174 6.59E-41 T 11-11-2016 S40542_RS22525 abb408e48e07b79ce2d35caf79775a9b 362 Gene3D G3DSA:1.10.560.10 2 140 2.9E-25 T 11-11-2016 IPR027413 GroEL-like equatorial domain S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 PIRSF PIRSF000410 1 266 1.3E-78 T 11-11-2016 IPR026024 Chemotaxis protein methyltransferase CheR S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 251 5.9E-50 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 Pfam PF03705 CheR methyltransferase, all-alpha domain 7 56 1.4E-9 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 PRINTS PR00996 Glutamate methyltransferase family signature 134 150 2.8E-37 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 2.8E-37 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 PRINTS PR00996 Glutamate methyltransferase family signature 224 247 2.8E-37 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 PRINTS PR00996 Glutamate methyltransferase family signature 102 122 2.8E-37 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 2.8E-37 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 PRINTS PR00996 Glutamate methyltransferase family signature 205 219 2.8E-37 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 Gene3D G3DSA:3.40.50.150 72 262 1.6E-54 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 Gene3D G3DSA:1.10.155.10 2 71 8.9E-15 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 SUPERFAMILY SSF53335 74 262 5.57E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 SMART SM00138 5 265 9.3E-75 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 S40542_RS09300 738baa94e8fe284be4b6af8840e60e33 267 SUPERFAMILY SSF47757 2 72 1.16E-13 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal S40542_RS14255 87282fe887e5895ed9ef3e4a36213606 447 SUPERFAMILY SSF55874 302 441 2.62E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS14255 87282fe887e5895ed9ef3e4a36213606 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 2.0E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS14255 87282fe887e5895ed9ef3e4a36213606 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 2.0E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS14255 87282fe887e5895ed9ef3e4a36213606 447 Gene3D G3DSA:3.30.565.10 301 441 1.4E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS14255 87282fe887e5895ed9ef3e4a36213606 447 SMART SM00387 338 445 2.0E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS14255 87282fe887e5895ed9ef3e4a36213606 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 443 1.1E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20555 94d1d51914606641133adc92e670c665 664 SUPERFAMILY SSF56935 39 629 1.17E-20 T 11-11-2016 S40542_RS20555 94d1d51914606641133adc92e670c665 664 Pfam PF00593 TonB dependent receptor 413 624 2.1E-4 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS18915 601f191a0132acd46039a986c5ffaf56 407 Gene3D G3DSA:1.20.810.10 3 404 1.2E-157 T 11-11-2016 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 S40542_RS18915 601f191a0132acd46039a986c5ffaf56 407 PIRSF PIRSF038885 1 407 6.2E-153 T 11-11-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 S40542_RS18915 601f191a0132acd46039a986c5ffaf56 407 SUPERFAMILY SSF81342 234 279 9.1E-91 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 S40542_RS18915 601f191a0132acd46039a986c5ffaf56 407 SUPERFAMILY SSF81342 4 207 9.1E-91 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 S40542_RS18915 601f191a0132acd46039a986c5ffaf56 407 Pfam PF00033 Cytochrome b/b6/petB 11 198 7.8E-65 T 11-11-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 S40542_RS18915 601f191a0132acd46039a986c5ffaf56 407 SUPERFAMILY SSF81648 284 394 1.18E-34 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 S40542_RS18915 601f191a0132acd46039a986c5ffaf56 407 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 282 383 8.4E-43 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 S40542_RS13370 6487f3910b535a947ed111c201a267bd 203 Pfam PF01810 LysE type translocator 18 201 3.3E-29 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 Pfam PF00672 HAMP domain 176 243 1.9E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 478 5.2E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 SUPERFAMILY SSF47384 243 322 1.82E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 SMART SM00388 256 324 4.8E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 SUPERFAMILY SSF55874 313 477 8.77E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 Gene3D G3DSA:1.10.287.130 247 320 2.3E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 SMART SM00387 368 480 1.1E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 Gene3D G3DSA:3.30.565.10 329 476 3.6E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 1.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 1.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07820 92d1085bcb8937d5c1ef24fc5da97d36 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 322 1.1E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Gene3D G3DSA:1.10.3170.10 150 346 6.6E-26 T 11-11-2016 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1041 1149 5.9E-5 T 11-11-2016 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 435 6.1E-60 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 SUPERFAMILY SSF52980 895 1171 1.5E-67 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 2 1171 20.684 T 11-11-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Gene3D G3DSA:1.10.486.10 581 724 8.1E-32 T 11-11-2016 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Gene3D G3DSA:3.40.50.300 350 451 4.9E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Gene3D G3DSA:3.40.50.300 115 145 4.9E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Gene3D G3DSA:3.40.50.300 10 77 4.9E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Pfam PF13361 UvrD-like helicase C-terminal domain 443 803 1.4E-21 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 4 1169 5.7E-280 T 11-11-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 SUPERFAMILY SSF52540 113 197 1.02E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 SUPERFAMILY SSF52540 7 75 1.02E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 SUPERFAMILY SSF52540 324 811 1.02E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Gene3D G3DSA:3.90.320.10 887 1173 2.0E-81 T 11-11-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Gene3D G3DSA:3.40.50.300 452 578 3.1E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14560 10f09c849ffc2efcc9e48fa66851fd6b 1175 Gene3D G3DSA:3.40.50.300 725 807 3.1E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11075 d98a81c19493caee8d3bfa1e30cd92e8 352 Gene3D G3DSA:3.75.10.10 2 344 8.4E-126 T 11-11-2016 S40542_RS11075 d98a81c19493caee8d3bfa1e30cd92e8 352 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 340 9.2E-112 T 11-11-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 S40542_RS11075 d98a81c19493caee8d3bfa1e30cd92e8 352 SUPERFAMILY SSF55909 2 341 4.46E-117 T 11-11-2016 S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 Gene3D G3DSA:3.30.160.20 152 222 5.3E-28 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 SUPERFAMILY SSF69065 3 157 1.92E-50 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 218 29.41 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 Pfam PF00035 Double-stranded RNA binding motif 155 221 1.0E-16 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 Pfam PF14622 Ribonuclease-III-like 18 141 3.0E-33 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 SMART SM00535 20 148 1.4E-56 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 SMART SM00358 155 222 1.4E-22 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 SUPERFAMILY SSF54768 109 221 6.13E-28 T 11-11-2016 S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 220 7.4E-76 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 S40542_RS15600 1453b01434c759fd7ba74852978de5bd 225 Gene3D G3DSA:1.10.1520.10 5 144 5.4E-49 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:1.25.40.10 1070 1140 1.1E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:1.25.40.10 1178 1179 1.1E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:1.25.40.10 1225 1252 1.1E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:1.25.40.10 608 633 1.1E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 377 495 5.8E-6 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 144 156 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 SMART SM00220 20 291 4.7E-56 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Pfam PF13191 AAA ATPase domain 529 711 5.3E-13 T 11-11-2016 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 SUPERFAMILY SSF55073 362 488 2.35E-15 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 TIGRFAM TIGR03903 TOMM_kin_cyc: TOMM system kinase/cyclase fusion protein 42 1259 5.5E-236 T 11-11-2016 IPR023889 TOMM system kinase/cyclase fusion protein S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:3.40.50.300 526 575 7.2E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:3.40.50.300 645 706 7.2E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:3.30.200.20 11 91 2.9E-22 T 11-11-2016 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 26 49 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 SUPERFAMILY SSF56112 9 341 3.37E-67 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Pfam PF00069 Protein kinase domain 20 277 2.8E-48 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 SUPERFAMILY SSF52540 528 793 2.55E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:1.10.510.10 92 285 2.5E-40 T 11-11-2016 S40542_RS09115 03f26e3bf1659082391cb0a431932cf5 1355 Gene3D G3DSA:3.30.70.1230 372 495 2.8E-9 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 S40542_RS04660 ca9d192bbc5b992455d31c350d6f5892 434 Gene3D G3DSA:3.40.1190.20 96 298 9.2E-40 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS04660 ca9d192bbc5b992455d31c350d6f5892 434 Gene3D G3DSA:3.40.1190.20 337 433 9.2E-40 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS04660 ca9d192bbc5b992455d31c350d6f5892 434 Gene3D G3DSA:3.30.1110.10 45 95 4.7E-5 T 11-11-2016 S40542_RS04660 ca9d192bbc5b992455d31c350d6f5892 434 SUPERFAMILY SSF53613 338 417 8.54E-44 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS04660 ca9d192bbc5b992455d31c350d6f5892 434 SUPERFAMILY SSF53613 35 307 8.54E-44 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS04660 ca9d192bbc5b992455d31c350d6f5892 434 Pfam PF00294 pfkB family carbohydrate kinase 134 294 5.2E-11 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 SUPERFAMILY SSF53686 7 354 5.76E-93 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 45 58 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 7 502 6.1E-212 T 11-11-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 318 408 7.5E-25 T 11-11-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 502 1.3E-24 T 11-11-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 SUPERFAMILY SSF55021 326 412 1.69E-25 T 11-11-2016 S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 Gene3D G3DSA:3.40.50.1100 70 321 6.0E-79 T 11-11-2016 S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 294 1.0E-74 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 SUPERFAMILY SSF55021 409 502 5.04E-25 T 11-11-2016 S40542_RS01475 23c1ee48030574d6298a3e069a1a9864 513 Gene3D G3DSA:3.40.1020.10 329 503 3.4E-51 T 11-11-2016 S40542_RS09820 b1fb28f506f89117ceb4d2f6dcd7cdc9 135 Pfam PF00959 Phage lysozyme 25 123 7.4E-9 T 11-11-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 S40542_RS09820 b1fb28f506f89117ceb4d2f6dcd7cdc9 135 Gene3D G3DSA:1.10.530.40 2 134 1.4E-34 T 11-11-2016 IPR023347 Lysozyme domain GO:0003796 S40542_RS09820 b1fb28f506f89117ceb4d2f6dcd7cdc9 135 SUPERFAMILY SSF53955 1 134 1.53E-37 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 259 657 2.9E-130 T 11-11-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 112 236 5.0E-45 T 11-11-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 SUPERFAMILY SSF51905 259 532 1.33E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 Gene3D G3DSA:3.50.50.60 246 336 3.0E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 Gene3D G3DSA:3.50.50.60 392 474 3.0E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 Gene3D G3DSA:3.50.50.60 565 636 3.0E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 3 653 25.961 T 11-11-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 Pfam PF01266 FAD dependent oxidoreductase 259 627 1.7E-41 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 S40542_RS08630 6534322075ec2526ca9d20f90adbec49 660 Gene3D G3DSA:3.40.50.150 7 241 1.7E-94 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 Gene3D G3DSA:1.10.3850.10 807 1036 1.5E-49 T 11-11-2016 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 Gene3D G3DSA:1.10.3850.10 275 500 2.1E-64 T 11-11-2016 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1033 2.0E-229 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 2 1038 0.0 T 11-11-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 SUPERFAMILY SSF82693 46 128 5.75E-20 T 11-11-2016 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 SUPERFAMILY SSF82714 716 800 9.94E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.8E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.8E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.8E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.8E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.8E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.8E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.8E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 SUPERFAMILY SSF82693 271 328 4.19E-23 T 11-11-2016 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 SUPERFAMILY SSF82693 137 184 4.19E-23 T 11-11-2016 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 SUPERFAMILY SSF82866 294 498 1.83E-39 T 11-11-2016 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 SUPERFAMILY SSF82866 801 1037 2.22E-42 T 11-11-2016 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 Gene3D G3DSA:3.30.70.1430 46 142 1.0E-24 T 11-11-2016 S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 Gene3D G3DSA:3.30.2090.10 185 269 2.6E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 Gene3D G3DSA:3.30.2090.10 717 799 1.4E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS16730 7cabae46b5aa9e4b5ac2f78c0971dcc3 1046 SUPERFAMILY SSF82714 185 269 2.35E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 Pfam PF00664 ABC transporter transmembrane region 115 374 5.8E-50 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 SUPERFAMILY SSF52540 414 661 1.0E-86 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 Pfam PF00005 ABC transporter 442 591 2.2E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 Gene3D G3DSA:3.90.70.10 2 85 8.8E-14 T 11-11-2016 S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 2 661 2.2E-287 T 11-11-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 SMART SM00382 451 637 8.3E-19 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 Gene3D G3DSA:1.20.1560.10 96 409 3.1E-81 T 11-11-2016 S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 SUPERFAMILY SSF90123 93 409 4.71E-71 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 Pfam PF03412 Peptidase C39 family 2 82 2.1E-7 T 11-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 ProSitePatterns PS00211 ABC transporters family signature. 563 577 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS10115 8a253c7da22a851ab576529493d94be7 681 Gene3D G3DSA:3.40.50.300 425 656 4.1E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11885 b47f3569a840e3a98997f8ff0f001c1c 148 Pfam PF06841 T4-like virus tail tube protein gp19 17 142 4.1E-31 T 11-11-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 S40542_RS11885 b47f3569a840e3a98997f8ff0f001c1c 148 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 11 145 2.4E-33 T 11-11-2016 IPR011747 Conserved hypothetical protein CHP02241 S40542_RS11530 ca73b178de7177e7cd073fb5231983bb 327 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 22 317 2.4E-83 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 S40542_RS11530 ca73b178de7177e7cd073fb5231983bb 327 SUPERFAMILY SSF52540 57 162 2.13E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11530 ca73b178de7177e7cd073fb5231983bb 327 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 318 37.494 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 S40542_RS11530 ca73b178de7177e7cd073fb5231983bb 327 Gene3D G3DSA:3.40.50.300 51 146 1.8E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11530 ca73b178de7177e7cd073fb5231983bb 327 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 16 316 9.9E-101 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 S40542_RS12140 8c54558a799921080bcdc9befb740a0e 115 Gene3D G3DSA:3.40.30.10 3 115 3.1E-42 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS12140 8c54558a799921080bcdc9befb740a0e 115 SUPERFAMILY SSF52833 3 114 8.96E-35 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS12140 8c54558a799921080bcdc9befb740a0e 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 2.8E-31 T 11-11-2016 IPR006504 Transcriptional regulator Spx/MgsR S40542_RS12140 8c54558a799921080bcdc9befb740a0e 115 Pfam PF03960 ArsC family 6 113 6.5E-17 T 11-11-2016 IPR006660 Arsenate reductase-like S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 Pfam PF13487 HD domain 406 471 4.2E-21 T 11-11-2016 S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 Pfam PF01590 GAF domain 36 199 9.5E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 SUPERFAMILY SSF55781 21 213 2.4E-20 T 11-11-2016 IPR029016 GAF domain-like S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 SMART SM00471 226 489 1.3E-4 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 SUPERFAMILY SSF109604 208 285 2.59E-12 T 11-11-2016 S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 SUPERFAMILY SSF109604 415 504 2.59E-12 T 11-11-2016 S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 SMART SM00065 36 209 4.3E-10 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 Gene3D G3DSA:1.10.3210.10 216 296 3.5E-8 T 11-11-2016 IPR006674 HD domain S40542_RS12315 88bd6483ef6eefaa59436d359bc737bf 550 Gene3D G3DSA:3.30.450.40 21 212 7.0E-28 T 11-11-2016 IPR029016 GAF domain-like S40542_RS01945 b54b739b41e5624190c5fe6a9079d3a2 203 SUPERFAMILY SSF52833 32 180 1.49E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS01945 b54b739b41e5624190c5fe6a9079d3a2 203 Gene3D G3DSA:3.40.30.10 5 180 3.0E-45 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS01945 b54b739b41e5624190c5fe6a9079d3a2 203 Pfam PF02630 SCO1/SenC 10 171 7.3E-32 T 11-11-2016 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 Gene3D G3DSA:3.40.50.2300 1 141 2.9E-36 T 11-11-2016 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 SUPERFAMILY SSF52172 1 118 2.42E-31 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 SMART SM00421 136 193 2.8E-18 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 1.4E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 1.4E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 1.4E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 Gene3D G3DSA:1.10.10.10 142 199 8.7E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 SMART SM00448 1 114 3.6E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 193 2.2E-15 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 Pfam PF00072 Response regulator receiver domain 3 114 1.5E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS19395 5c9ac2c4e73d4d5d75f1e16e4334998b 199 SUPERFAMILY SSF46894 124 199 3.74E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS04785 572133dc19a5505c662adf391837d7b1 508 Pfam PF00072 Response regulator receiver domain 26 134 3.2E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04785 572133dc19a5505c662adf391837d7b1 508 Pfam PF01966 HD domain 335 456 6.2E-17 T 11-11-2016 IPR006674 HD domain S40542_RS04785 572133dc19a5505c662adf391837d7b1 508 SMART SM00471 329 466 4.7E-8 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS04785 572133dc19a5505c662adf391837d7b1 508 SUPERFAMILY SSF109604 326 497 4.08E-41 T 11-11-2016 S40542_RS04785 572133dc19a5505c662adf391837d7b1 508 Gene3D G3DSA:3.40.50.2300 26 154 1.5E-13 T 11-11-2016 S40542_RS04785 572133dc19a5505c662adf391837d7b1 508 Pfam PF11849 Domain of unknown function (DUF3369) 146 310 1.2E-36 T 11-11-2016 IPR021800 Domain of unknown function DUF3369 S40542_RS04785 572133dc19a5505c662adf391837d7b1 508 Gene3D G3DSA:1.10.3210.10 328 499 5.0E-24 T 11-11-2016 IPR006674 HD domain S40542_RS04785 572133dc19a5505c662adf391837d7b1 508 SUPERFAMILY SSF52172 25 167 3.27E-11 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03105 3a6f5af0ad8c0b494ee5cabec5e61792 679 Gene3D G3DSA:2.130.10.10 16 363 1.6E-50 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS03105 3a6f5af0ad8c0b494ee5cabec5e61792 679 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 197 283 5.5E-9 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 S40542_RS03105 3a6f5af0ad8c0b494ee5cabec5e61792 679 Pfam PF07676 WD40-like Beta Propeller Repeat 133 149 0.021 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS03105 3a6f5af0ad8c0b494ee5cabec5e61792 679 Pfam PF07676 WD40-like Beta Propeller Repeat 87 115 3.7E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS03105 3a6f5af0ad8c0b494ee5cabec5e61792 679 Pfam PF00326 Prolyl oligopeptidase family 469 675 6.7E-45 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS03105 3a6f5af0ad8c0b494ee5cabec5e61792 679 SUPERFAMILY SSF82171 38 420 2.35E-41 T 11-11-2016 S40542_RS03105 3a6f5af0ad8c0b494ee5cabec5e61792 679 Gene3D G3DSA:3.40.50.1820 427 675 6.0E-61 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03105 3a6f5af0ad8c0b494ee5cabec5e61792 679 SUPERFAMILY SSF53474 430 675 2.3E-62 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS15940 c11e0b7965cb6552e7150089d2cb96e0 309 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.493 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 S40542_RS15940 c11e0b7965cb6552e7150089d2cb96e0 309 Pfam PF02401 LytB protein 3 282 9.2E-94 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 S40542_RS15940 c11e0b7965cb6552e7150089d2cb96e0 309 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 1.7E-102 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 S40542_RS06205 a63e00e6d3ba5f476be3e157e52eef90 482 Pfam PF00501 AMP-binding enzyme 16 387 2.0E-57 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS06205 a63e00e6d3ba5f476be3e157e52eef90 482 Gene3D G3DSA:3.30.300.30 382 480 1.5E-19 T 11-11-2016 S40542_RS06205 a63e00e6d3ba5f476be3e157e52eef90 482 SUPERFAMILY SSF56801 10 480 8.9E-96 T 11-11-2016 S40542_RS06205 a63e00e6d3ba5f476be3e157e52eef90 482 Gene3D G3DSA:2.30.38.10 315 378 1.1E-9 T 11-11-2016 S40542_RS06205 a63e00e6d3ba5f476be3e157e52eef90 482 Gene3D G3DSA:3.40.50.980 151 314 1.0E-34 T 11-11-2016 S40542_RS06205 a63e00e6d3ba5f476be3e157e52eef90 482 ProSitePatterns PS00455 Putative AMP-binding domain signature. 144 155 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS06205 a63e00e6d3ba5f476be3e157e52eef90 482 Gene3D G3DSA:3.40.50.980 6 150 2.9E-22 T 11-11-2016 S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 Pfam PF02954 Bacterial regulatory protein, Fis family 316 352 5.2E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 Gene3D G3DSA:1.10.8.60 182 258 5.4E-21 T 11-11-2016 S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 96 111 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 SMART SM00382 30 181 1.7E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 Pfam PF00158 Sigma-54 interaction domain 10 173 4.2E-61 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 SUPERFAMILY SSF46689 300 354 1.29E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 SUPERFAMILY SSF52540 10 252 6.25E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 Gene3D G3DSA:1.10.10.60 296 354 7.3E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 Gene3D G3DSA:3.40.50.300 8 181 2.7E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 10 352 2.4E-170 T 11-11-2016 IPR014317 Transcription activator PspF S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 318 335 4.4E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS16840 151ad167ce7f50ac061f5c69f5dcc05d 361 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 335 355 4.4E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS11020 580fb2e62176eb5eb917cd05e6812251 56 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 1.0E-20 T 11-11-2016 IPR007040 Ribosome modulation factor S40542_RS11020 580fb2e62176eb5eb917cd05e6812251 56 Gene3D G3DSA:1.10.10.620 1 52 5.4E-27 T 11-11-2016 IPR023200 Ribosome modulation factor-like domain S40542_RS11020 580fb2e62176eb5eb917cd05e6812251 56 Pfam PF04957 Ribosome modulation factor 1 52 3.4E-29 T 11-11-2016 IPR007040 Ribosome modulation factor S40542_RS11020 580fb2e62176eb5eb917cd05e6812251 56 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 54 28.619 T 11-11-2016 IPR007040 Ribosome modulation factor S40542_RS18085 6cc3aee94c34181890f3119e65c6d23b 207 Pfam PF01810 LysE type translocator 19 206 4.0E-40 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS18085 6cc3aee94c34181890f3119e65c6d23b 207 PIRSF PIRSF006324 4 207 3.8E-52 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS07350 bca60ed919201eacfb74db96e3f0d053 92 Pfam PF13601 Winged helix DNA-binding domain 13 91 6.1E-23 T 11-11-2016 IPR027395 Winged helix DNA-binding domain S40542_RS07350 bca60ed919201eacfb74db96e3f0d053 92 SUPERFAMILY SSF46785 4 90 1.3E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS07350 bca60ed919201eacfb74db96e3f0d053 92 Gene3D G3DSA:1.10.10.10 2 91 1.3E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15590 b0e59eec4e2767be0452ac24772fef81 248 SUPERFAMILY SSF50249 7 77 4.45E-5 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS15590 b0e59eec4e2767be0452ac24772fef81 248 Pfam PF11967 Recombination protein O N terminal 7 77 5.2E-11 T 11-11-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal S40542_RS15590 b0e59eec4e2767be0452ac24772fef81 248 Hamap MF_00201 DNA repair protein RecO [recO]. 2 248 16.063 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 S40542_RS15590 b0e59eec4e2767be0452ac24772fef81 248 Pfam PF02565 Recombination protein O C terminal 84 243 5.0E-13 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 S40542_RS12060 66e87ec20931be65e8f06e432209383e 115 SUPERFAMILY SSF81343 7 115 1.79E-25 T 11-11-2016 S40542_RS12060 66e87ec20931be65e8f06e432209383e 115 PIRSF PIRSF000169 1 115 1.0E-37 T 11-11-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 S40542_RS12060 66e87ec20931be65e8f06e432209383e 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 5.0E-31 T 11-11-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 S40542_RS12060 66e87ec20931be65e8f06e432209383e 115 Gene3D G3DSA:1.20.1300.10 2 115 1.9E-30 T 11-11-2016 S40542_RS06580 34415b8b5303a595873a52b59e164e88 675 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 43 675 2.7E-201 T 11-11-2016 IPR010100 TonB-dependent copper receptor S40542_RS06580 34415b8b5303a595873a52b59e164e88 675 SUPERFAMILY SSF56935 19 675 5.13E-76 T 11-11-2016 S40542_RS06580 34415b8b5303a595873a52b59e164e88 675 Pfam PF00593 TonB dependent receptor 425 674 7.0E-20 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS06580 34415b8b5303a595873a52b59e164e88 675 Gene3D G3DSA:2.170.130.10 53 146 5.6E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS06580 34415b8b5303a595873a52b59e164e88 675 Gene3D G3DSA:2.40.170.20 164 675 2.7E-60 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS06580 34415b8b5303a595873a52b59e164e88 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 139 2.1E-10 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS06580 34415b8b5303a595873a52b59e164e88 675 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 658 675 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site S40542_RS16975 363cff366d339bd80ae73465dd1cf6ba 418 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 235 397 1.2E-54 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 S40542_RS16975 363cff366d339bd80ae73465dd1cf6ba 418 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 236 399 8.5E-37 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 S40542_RS15120 b9a147c85ac7e95cb869ae0cf9f44950 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.8E-48 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 S40542_RS15120 b9a147c85ac7e95cb869ae0cf9f44950 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.258 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 S40542_RS01480 7ffb8fffc93f9eeab4b9a8fa51997422 349 Pfam PF09084 NMT1/THI5 like 33 242 6.8E-46 T 11-11-2016 IPR015168 SsuA/THI5-like S40542_RS01480 7ffb8fffc93f9eeab4b9a8fa51997422 349 SUPERFAMILY SSF53850 22 247 3.62E-25 T 11-11-2016 S40542_RS01480 7ffb8fffc93f9eeab4b9a8fa51997422 349 Gene3D G3DSA:3.40.190.10 109 227 6.8E-8 T 11-11-2016 S40542_RS02845 8c357ab09a5afa5edcb6d93818d33fed 231 Pfam PF04279 Intracellular septation protein A 38 121 1.9E-6 T 11-11-2016 IPR006008 Intracellular septation protein A GO:0016021 S40542_RS02845 8c357ab09a5afa5edcb6d93818d33fed 231 PIRSF PIRSF028137 1 231 5.1E-77 T 11-11-2016 IPR016870 Uncharacterised conserved protein UCP028137, membrane S40542_RS17805 5e2b0fa80f758be79c9bdd663a342fbd 79 SUPERFAMILY SSF88659 5 64 3.2E-5 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS17805 5e2b0fa80f758be79c9bdd663a342fbd 79 Gene3D G3DSA:1.10.10.10 9 76 1.7E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17805 5e2b0fa80f758be79c9bdd663a342fbd 79 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 11 71 1.9E-6 T 11-11-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like S40542_RS13585 930f27adc714eed701f524093411f9ae 323 PIRSF PIRSF015753 5 323 8.4E-134 T 11-11-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 S40542_RS13585 930f27adc714eed701f524093411f9ae 323 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 1.8E-23 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 S40542_RS13585 930f27adc714eed701f524093411f9ae 323 SUPERFAMILY SSF52833 41 160 2.92E-15 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS13585 930f27adc714eed701f524093411f9ae 323 Gene3D G3DSA:3.40.30.10 42 178 4.4E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS13585 930f27adc714eed701f524093411f9ae 323 SUPERFAMILY SSF47616 175 322 1.09E-34 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS13585 930f27adc714eed701f524093411f9ae 323 Pfam PF13410 Glutathione S-transferase, C-terminal domain 208 274 4.2E-11 T 11-11-2016 S40542_RS13585 930f27adc714eed701f524093411f9ae 323 Gene3D G3DSA:1.20.1050.10 179 287 3.7E-24 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 SUPERFAMILY SSF55681 96 463 1.27E-98 T 11-11-2016 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.8E-11 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 464 2.0E-206 T 11-11-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 Gene3D G3DSA:3.30.930.10 108 462 2.8E-116 T 11-11-2016 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 SUPERFAMILY SSF50249 16 101 5.78E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 Gene3D G3DSA:2.40.50.140 16 103 1.5E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 460 1.7E-87 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 380 396 8.9E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 219 8.9E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 223 236 8.9E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 420 434 8.9E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS09600 98f00805c4278b5d4fc9e1b725267b66 465 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 465 45.909 T 11-11-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 896 1001 3.3E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 Pfam PF12860 PAS fold 618 731 5.7E-42 T 11-11-2016 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 SUPERFAMILY SSF55785 603 725 8.37E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 SMART SM00387 895 1003 3.2E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 Gene3D G3DSA:3.30.565.10 853 1006 4.3E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 Gene3D G3DSA:1.10.287.130 778 847 9.6E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 Gene3D G3DSA:3.40.50.2300 1016 1137 1.8E-20 T 11-11-2016 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 SUPERFAMILY SSF52172 1021 1138 2.99E-18 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 SMART SM00448 1022 1135 1.2E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 Gene3D G3DSA:3.30.450.20 604 725 4.3E-11 T 11-11-2016 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 SMART SM00388 786 851 6.1E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 Pfam PF00072 Response regulator receiver domain 1024 1135 2.7E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1000 1.5E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 963 981 1.5E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 949 959 1.5E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 931 945 1.5E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 Pfam PF00512 His Kinase A (phospho-acceptor) domain 786 851 1.3E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 SUPERFAMILY SSF47384 771 851 1.77E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03550 8782704d4c221dd3b12639163253ed95 1142 SUPERFAMILY SSF55874 841 1003 1.83E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15745 9e1050ab9c11a3d964019f868317edac 98 SUPERFAMILY SSF47781 18 97 4.56E-20 T 11-11-2016 IPR010994 RuvA domain 2-like S40542_RS15745 9e1050ab9c11a3d964019f868317edac 98 SMART SM00278 45 64 0.015 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS15745 9e1050ab9c11a3d964019f868317edac 98 SMART SM00278 75 94 200.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS15745 9e1050ab9c11a3d964019f868317edac 98 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 36 97 1.8E-15 T 11-11-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain S40542_RS15745 9e1050ab9c11a3d964019f868317edac 98 Gene3D G3DSA:1.10.150.280 15 98 7.4E-20 T 11-11-2016 S40542_RS15745 9e1050ab9c11a3d964019f868317edac 98 Pfam PF12836 Helix-hairpin-helix motif 36 95 1.6E-16 T 11-11-2016 S40542_RS14025 750f8ac0b0fdc44b467969ab26f9984b 339 Gene3D G3DSA:3.90.215.10 120 169 4.0E-10 T 11-11-2016 IPR014716 Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 S40542_RS14025 750f8ac0b0fdc44b467969ab26f9984b 339 SUPERFAMILY SSF56496 117 172 8.22E-10 T 11-11-2016 IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain S40542_RS14025 750f8ac0b0fdc44b467969ab26f9984b 339 Pfam PF00147 Fibrinogen beta and gamma chains, C-terminal globular domain 127 171 3.7E-5 T 11-11-2016 IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain S40542_RS01765 3dd423ceb98a6978e8f31c2999624594 155 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 7.7E-23 T 11-11-2016 IPR028051 Chemotaxis phosphatase CheX-like domain S40542_RS01765 3dd423ceb98a6978e8f31c2999624594 155 SUPERFAMILY SSF103039 1 152 4.58E-38 T 11-11-2016 IPR028976 CheC-like domain S40542_RS01765 3dd423ceb98a6978e8f31c2999624594 155 Gene3D G3DSA:3.40.1550.10 1 153 1.2E-42 T 11-11-2016 IPR028976 CheC-like domain S40542_RS06175 f24216c84eb271ddd06dc978ca550793 434 SUPERFAMILY SSF53187 86 337 4.65E-22 T 11-11-2016 S40542_RS06175 f24216c84eb271ddd06dc978ca550793 434 Pfam PF16254 Domain of unknown function (DUF4910) 13 349 2.9E-71 T 11-11-2016 IPR032589 Domain of unknown function DUF4910 S40542_RS06175 f24216c84eb271ddd06dc978ca550793 434 PIRSF PIRSF015244 2 434 5.2E-127 T 11-11-2016 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like S40542_RS06175 f24216c84eb271ddd06dc978ca550793 434 Pfam PF09940 Domain of unknown function (DUF2172) 61 152 9.0E-33 T 11-11-2016 IPR032610 Domain of unknown function DUF2172 S40542_RS06175 f24216c84eb271ddd06dc978ca550793 434 Pfam PF16221 winged helix-turn-helix 353 432 1.8E-17 T 11-11-2016 IPR032622 UCP01524, winged helix-turn-helix domain S40542_RS18910 d8ac5fbd1ee5f21952ac216c8c6c7f2e 245 SUPERFAMILY SSF46626 20 209 1.04E-43 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS18910 d8ac5fbd1ee5f21952ac216c8c6c7f2e 245 Gene3D G3DSA:1.20.5.100 217 245 3.3E-8 T 11-11-2016 S40542_RS18910 d8ac5fbd1ee5f21952ac216c8c6c7f2e 245 Pfam PF02167 Cytochrome C1 family 35 244 2.7E-17 T 11-11-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 S40542_RS18910 d8ac5fbd1ee5f21952ac216c8c6c7f2e 245 Gene3D G3DSA:1.10.760.10 18 210 1.7E-58 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 SUPERFAMILY SSF53335 7 315 9.34E-56 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 Gene3D G3DSA:3.40.50.150 103 315 1.1E-53 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 92 106 7.4E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 127 137 7.4E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 298 315 7.4E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 244 260 7.4E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 194 206 7.4E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 480 57.254 T 11-11-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 106 1.3E-25 T 11-11-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 Pfam PF01189 16S rRNA methyltransferase RsmB/F 122 314 1.5E-44 T 11-11-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 425 473 8.8E-11 T 11-11-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS13930 eae9cbf63c1dc4a55a59c44695a57f0b 483 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 315 5.3E-88 T 11-11-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 SUPERFAMILY SSF52096 5 305 5.81E-67 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-11-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Gene3D G3DSA:3.90.226.10 5 201 1.6E-55 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Gene3D G3DSA:3.90.226.10 235 295 1.6E-55 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 SUPERFAMILY SSF48179 626 715 2.3E-24 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Gene3D G3DSA:3.40.50.720 311 498 1.9E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 SUPERFAMILY SSF48179 496 606 2.81E-27 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Gene3D G3DSA:1.10.1040.10 633 715 1.8E-17 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 206 5.7E-40 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 4.6E-58 T 11-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 691 1.4E-4 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 2.8E-25 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 11-11-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 SUPERFAMILY SSF51735 313 496 4.24E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 Gene3D G3DSA:1.10.1040.10 499 593 8.4E-22 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS00050 ef0fdd26cb9328bcb8ef7f0e10031c32 720 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 11-11-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 S40542_RS13620 24b71cd4b6eda53fe37365e11caa0b72 167 SUPERFAMILY SSF75217 8 145 2.35E-27 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS13620 24b71cd4b6eda53fe37365e11caa0b72 167 Gene3D G3DSA:3.40.1280.10 10 147 5.3E-19 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS13620 24b71cd4b6eda53fe37365e11caa0b72 167 Pfam PF00588 SpoU rRNA Methylase family 8 139 1.3E-18 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 S40542_RS19400 88ef83be1b623b370e52c83a5719edb6 358 Pfam PF07730 Histidine kinase 175 239 1.9E-15 T 11-11-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 S40542_RS19400 88ef83be1b623b370e52c83a5719edb6 358 Gene3D G3DSA:3.30.565.10 253 318 6.2E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS19400 88ef83be1b623b370e52c83a5719edb6 358 SUPERFAMILY SSF55874 247 351 1.72E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12465 279d5652b6397706dc54a0a082138796 308 SUPERFAMILY SSF52402 2 183 2.18E-53 T 11-11-2016 S40542_RS12465 279d5652b6397706dc54a0a082138796 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 11-11-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 S40542_RS12465 279d5652b6397706dc54a0a082138796 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 2.2E-35 T 11-11-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 S40542_RS12465 279d5652b6397706dc54a0a082138796 308 PIRSF PIRSF000089 1 308 5.7E-102 T 11-11-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 S40542_RS12465 279d5652b6397706dc54a0a082138796 308 SUPERFAMILY SSF52467 188 307 1.86E-47 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS12465 279d5652b6397706dc54a0a082138796 308 Pfam PF01012 Electron transfer flavoprotein domain 3 159 1.9E-37 T 11-11-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 S40542_RS12465 279d5652b6397706dc54a0a082138796 308 SMART SM00893 3 181 3.5E-46 T 11-11-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 S40542_RS12465 279d5652b6397706dc54a0a082138796 308 Gene3D G3DSA:3.40.50.620 1 180 1.9E-55 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS12465 279d5652b6397706dc54a0a082138796 308 Gene3D G3DSA:3.40.50.1220 182 308 3.5E-61 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS05645 2dad65961ef139dfcb52e375ff4bcf18 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 25.965 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS S40542_RS05645 2dad65961ef139dfcb52e375ff4bcf18 105 SUPERFAMILY SSF81301 2 105 1.1E-39 T 11-11-2016 S40542_RS05645 2dad65961ef139dfcb52e375ff4bcf18 105 Gene3D G3DSA:3.30.460.10 3 105 7.4E-40 T 11-11-2016 S40542_RS05645 2dad65961ef139dfcb52e375ff4bcf18 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 4.5E-39 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS S40542_RS05645 2dad65961ef139dfcb52e375ff4bcf18 105 Pfam PF02410 Ribosomal silencing factor during starvation 13 104 1.6E-28 T 11-11-2016 S40542_RS19820 6f5af7cdba5347b67fe124c52dc99062 67 Pfam PF03621 MbtH-like protein 2 50 1.4E-22 T 11-11-2016 IPR005153 MbtH-like protein S40542_RS19820 6f5af7cdba5347b67fe124c52dc99062 67 SUPERFAMILY SSF160582 2 65 1.22E-27 T 11-11-2016 S40542_RS19820 6f5af7cdba5347b67fe124c52dc99062 67 SMART SM00923 1 51 4.3E-25 T 11-11-2016 IPR005153 MbtH-like protein S40542_RS19820 6f5af7cdba5347b67fe124c52dc99062 67 Gene3D G3DSA:3.90.820.10 8 66 1.6E-29 T 11-11-2016 S40542_RS23965 d5a46dcb67aa533b81bb2662340fc737 134 Gene3D G3DSA:3.40.50.300 16 59 3.0E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS23965 d5a46dcb67aa533b81bb2662340fc737 134 Pfam PF13175 AAA ATPase domain 16 85 6.8E-11 T 11-11-2016 S40542_RS23965 d5a46dcb67aa533b81bb2662340fc737 134 SUPERFAMILY SSF52540 16 57 2.28E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 SUPERFAMILY SSF50249 132 188 1.88E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 5.6E-80 T 11-11-2016 IPR011897 Translation elongation factor P-like, YeiP S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 5.5E-16 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 Gene3D G3DSA:2.40.50.140 66 129 3.4E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 SMART SM00841 132 187 1.9E-26 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 SMART SM01185 69 124 3.1E-15 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 PIRSF PIRSF005901 1 189 7.2E-62 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 Pfam PF09285 Elongation factor P, C-terminal 132 187 4.1E-20 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 SUPERFAMILY SSF50249 67 129 1.2E-11 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 Gene3D G3DSA:2.30.30.30 1 65 7.4E-10 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 44.72 T 11-11-2016 IPR011897 Translation elongation factor P-like, YeiP S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 SUPERFAMILY SSF50104 1 64 1.08E-10 T 11-11-2016 IPR008991 Translation protein SH3-like domain S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 11-11-2016 IPR013852 Translation elongation factor P/YeiP, conserved site S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 Gene3D G3DSA:2.40.50.140 131 188 1.6E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS02365 19309faf6b8a482237d9b30029c2a48e 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 1.2E-14 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 246 5.2E-59 T 11-11-2016 S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 SUPERFAMILY SSF51735 4 248 5.03E-77 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 5 248 2.3E-105 T 11-11-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 Gene3D G3DSA:3.40.50.720 4 248 1.0E-78 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.2E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.2E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.2E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.2E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.2E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05535 f74a9bb2b5964cc5479e1326acf7cf4e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.2E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 Gene3D G3DSA:3.40.50.270 3 144 1.5E-44 T 11-11-2016 S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 99 112 1.3E-19 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 77 92 1.3E-19 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.3E-19 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 115 130 1.3E-19 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 43 59 1.3E-19 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 140 6.0E-36 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 SMART SM00226 3 143 8.5E-40 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS18585 f2e22f97cfd05b242b0e502cb3b77cd0 144 SUPERFAMILY SSF52788 2 144 3.27E-41 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 Gene3D G3DSA:1.10.286.20 180 224 1.9E-20 T 11-11-2016 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 277 76.648 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 SUPERFAMILY SSF54713 141 277 1.53E-48 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 SUPERFAMILY SSF46934 3 53 1.22E-18 T 11-11-2016 IPR009060 UBA-like GO:0005515 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 277 1.1E-106 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 SUPERFAMILY SSF54713 55 136 1.74E-18 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 Pfam PF00889 Elongation factor TS 70 260 1.6E-59 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 Gene3D G3DSA:1.10.8.10 1 54 5.6E-28 T 11-11-2016 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 Gene3D G3DSA:3.30.479.20 56 92 1.5E-27 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 Gene3D G3DSA:3.30.479.20 164 179 1.5E-27 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 Gene3D G3DSA:3.30.479.20 225 263 1.5E-27 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS06620 f2b4c8aa551259a37ac11c2d141836fb 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS18390 284376b55cc614582717075a84e28b58 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 357 5.5E-86 T 11-11-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 S40542_RS18390 284376b55cc614582717075a84e28b58 384 Gene3D G3DSA:3.40.50.1970 1 181 1.9E-55 T 11-11-2016 S40542_RS18390 284376b55cc614582717075a84e28b58 384 SUPERFAMILY SSF56796 2 364 3.93E-104 T 11-11-2016 S40542_RS18390 284376b55cc614582717075a84e28b58 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 261 281 - T 11-11-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 S40542_RS18390 284376b55cc614582717075a84e28b58 384 Gene3D G3DSA:1.20.1090.10 182 383 2.1E-47 T 11-11-2016 S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 SUPERFAMILY SSF55031 213 314 5.23E-28 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 Pfam PF01546 Peptidase family M20/M25/M40 90 389 1.1E-25 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 Gene3D G3DSA:3.30.70.360 211 314 8.4E-34 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 39 391 2.1E-81 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 Gene3D G3DSA:3.40.630.10 14 207 3.6E-85 T 11-11-2016 S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 Gene3D G3DSA:3.40.630.10 330 436 3.6E-85 T 11-11-2016 S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 SUPERFAMILY SSF53187 22 226 6.29E-75 T 11-11-2016 S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 SUPERFAMILY SSF53187 333 436 6.29E-75 T 11-11-2016 S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 Pfam PF07687 Peptidase dimerisation domain 209 304 2.1E-14 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS02465 b0d52b6db70f110f975c1c3704ce6dee 437 PIRSF PIRSF005962 18 437 2.6E-100 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 S40542_RS06060 deb7367882c2aaecf7bd5e53702dab50 285 Pfam PF14559 Tetratricopeptide repeat 128 193 4.7E-14 T 11-11-2016 S40542_RS06060 deb7367882c2aaecf7bd5e53702dab50 285 Gene3D G3DSA:1.25.40.10 114 199 3.6E-21 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06060 deb7367882c2aaecf7bd5e53702dab50 285 SUPERFAMILY SSF48452 123 277 3.8E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06060 deb7367882c2aaecf7bd5e53702dab50 285 Pfam PF00085 Thioredoxin 6 112 2.1E-12 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 S40542_RS06060 deb7367882c2aaecf7bd5e53702dab50 285 Gene3D G3DSA:1.25.40.10 201 285 9.3E-23 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06060 deb7367882c2aaecf7bd5e53702dab50 285 SUPERFAMILY SSF52833 5 115 2.43E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS06060 deb7367882c2aaecf7bd5e53702dab50 285 Gene3D G3DSA:3.40.30.10 5 113 4.3E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS06060 deb7367882c2aaecf7bd5e53702dab50 285 Pfam PF14561 Tetratricopeptide repeat 199 285 4.2E-21 T 11-11-2016 S40542_RS02005 5f17f840a08543bb298511e5162e5874 843 Pfam PF00246 Zinc carboxypeptidase 57 296 5.5E-18 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS02005 5f17f840a08543bb298511e5162e5874 843 SUPERFAMILY SSF53187 41 331 2.28E-54 T 11-11-2016 S40542_RS02005 5f17f840a08543bb298511e5162e5874 843 SMART SM00631 49 331 5.5E-4 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS02005 5f17f840a08543bb298511e5162e5874 843 SUPERFAMILY SSF52317 605 840 1.4E-14 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS02005 5f17f840a08543bb298511e5162e5874 843 Gene3D G3DSA:3.40.630.10 47 313 1.9E-33 T 11-11-2016 S40542_RS05005 5c5e07f7610c58e53331c66409219518 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 29.055 T 11-11-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 S40542_RS05005 5c5e07f7610c58e53331c66409219518 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 3.6E-56 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 S40542_RS05005 5c5e07f7610c58e53331c66409219518 202 PIRSF PIRSF006102 1 202 6.6E-61 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 S40542_RS05005 5c5e07f7610c58e53331c66409219518 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 200 3.8E-101 T 11-11-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 543 944 1.3E-107 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Pfam PF00550 Phosphopantetheine attachment site 1031 1091 1.7E-6 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Pfam PF13745 HxxPF-repeated domain 379 467 3.7E-9 T 11-11-2016 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 ProSitePatterns PS00455 Putative AMP-binding domain signature. 666 677 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 SUPERFAMILY SSF52777 75 259 2.45E-32 T 11-11-2016 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Gene3D G3DSA:2.30.38.10 832 908 2.2E-21 T 11-11-2016 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 SUPERFAMILY SSF52777 247 485 2.22E-44 T 11-11-2016 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Gene3D G3DSA:3.40.50.980 674 831 1.3E-32 T 11-11-2016 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 SUPERFAMILY SSF47336 1023 1094 9.18E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 SUPERFAMILY SSF53474 1124 1342 2.93E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Pfam PF13193 AMP-binding enzyme C-terminal domain 928 1005 3.0E-5 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Pfam PF00975 Thioesterase domain 1135 1248 1.6E-13 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Pfam PF00501 AMP-binding enzyme 523 920 4.7E-83 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 SUPERFAMILY SSF56801 484 1041 2.35E-123 T 11-11-2016 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Pfam PF00668 Condensation domain 73 354 3.6E-53 T 11-11-2016 IPR001242 Condensation domain S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Gene3D G3DSA:1.10.1200.10 1032 1096 5.5E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Gene3D G3DSA:3.40.50.1820 1266 1358 2.0E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Gene3D G3DSA:3.40.50.1820 1130 1232 2.0E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Gene3D G3DSA:3.30.300.30 915 1031 6.0E-33 T 11-11-2016 S40542_RS00870 47859f566f9bdddec6ee42ad85c29532 1368 Gene3D G3DSA:3.40.50.980 516 673 2.2E-38 T 11-11-2016 S40542_RS14790 72b37c8b93b7bf71967ec6b7e271b32f 195 Pfam PF00578 AhpC/TSA family 49 172 1.6E-21 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS14790 72b37c8b93b7bf71967ec6b7e271b32f 195 ProSitePatterns PS01265 Tpx family signature. 113 124 - T 11-11-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 S40542_RS14790 72b37c8b93b7bf71967ec6b7e271b32f 195 SUPERFAMILY SSF52833 33 189 1.14E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS14790 72b37c8b93b7bf71967ec6b7e271b32f 195 Gene3D G3DSA:3.40.30.10 33 195 1.7E-45 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS12255 cd573a8b784122d13072150e91c6ab15 336 SMART SM00354 3 73 4.1E-26 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 S40542_RS12255 cd573a8b784122d13072150e91c6ab15 336 Gene3D G3DSA:3.40.50.2300 56 176 3.9E-30 T 11-11-2016 S40542_RS12255 cd573a8b784122d13072150e91c6ab15 336 SUPERFAMILY SSF47413 1 61 7.51E-20 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS12255 cd573a8b784122d13072150e91c6ab15 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 3.6E-20 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 S40542_RS12255 cd573a8b784122d13072150e91c6ab15 336 SUPERFAMILY SSF53822 64 334 3.87E-75 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS12255 cd573a8b784122d13072150e91c6ab15 336 Gene3D G3DSA:3.40.50.2300 177 313 3.6E-53 T 11-11-2016 S40542_RS12255 cd573a8b784122d13072150e91c6ab15 336 Pfam PF13377 Periplasmic binding protein-like domain 172 333 1.4E-43 T 11-11-2016 S40542_RS12255 cd573a8b784122d13072150e91c6ab15 336 Gene3D G3DSA:1.10.260.40 4 55 1.5E-26 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 SMART SM00382 348 521 1.3E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 SMART SM00382 31 236 1.4E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 SUPERFAMILY SSF52540 303 531 2.18E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 Pfam PF00005 ABC transporter 22 191 9.0E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 Pfam PF00005 ABC transporter 340 473 3.0E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.6E-292 T 11-11-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 SUPERFAMILY SSF52540 9 243 2.35E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 Pfam PF12848 ABC transporter 230 303 7.1E-12 T 11-11-2016 IPR032781 ABC-transporter extension domain S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 Gene3D G3DSA:3.40.50.300 322 532 1.5E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16620 3b3673408dd30bc52420ed06c8433c12 554 Gene3D G3DSA:3.40.50.300 8 278 2.0E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20365 36a5e586bdde4193b767cb44d77252d1 296 Gene3D G3DSA:3.40.190.10 91 176 7.1E-28 T 11-11-2016 S40542_RS20365 36a5e586bdde4193b767cb44d77252d1 296 SUPERFAMILY SSF53850 89 293 7.45E-48 T 11-11-2016 S40542_RS20365 36a5e586bdde4193b767cb44d77252d1 296 Pfam PF03466 LysR substrate binding domain 88 287 1.1E-46 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS20365 36a5e586bdde4193b767cb44d77252d1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.4E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS20365 36a5e586bdde4193b767cb44d77252d1 296 Gene3D G3DSA:1.10.10.10 1 84 1.0E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20365 36a5e586bdde4193b767cb44d77252d1 296 SUPERFAMILY SSF46785 1 111 3.35E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20365 36a5e586bdde4193b767cb44d77252d1 296 Gene3D G3DSA:3.40.190.10 177 254 1.5E-18 T 11-11-2016 S40542_RS07530 c048bb8e4c9ef68aa8d35871bb8319e8 323 SUPERFAMILY SSF143422 15 81 1.83E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07530 c048bb8e4c9ef68aa8d35871bb8319e8 323 SUPERFAMILY SSF143422 134 193 1.83E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07530 c048bb8e4c9ef68aa8d35871bb8319e8 323 Gene3D G3DSA:3.30.70.1290 135 190 1.2E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07530 c048bb8e4c9ef68aa8d35871bb8319e8 323 Gene3D G3DSA:3.30.70.1290 16 82 1.2E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07530 c048bb8e4c9ef68aa8d35871bb8319e8 323 SMART SM01321 12 187 6.3E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06715 c46e2a7f1782091b6c81200520bdbc55 667 Pfam PF02080 TrkA-C domain 594 662 5.2E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS06715 c46e2a7f1782091b6c81200520bdbc55 667 Gene3D G3DSA:3.30.70.1450 592 662 2.0E-13 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS06715 c46e2a7f1782091b6c81200520bdbc55 667 SUPERFAMILY SSF116726 588 661 8.24E-13 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 S40542_RS06715 c46e2a7f1782091b6c81200520bdbc55 667 SUPERFAMILY SSF51735 406 548 4.36E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06715 c46e2a7f1782091b6c81200520bdbc55 667 Pfam PF00999 Sodium/hydrogen exchanger family 12 373 5.7E-61 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 S40542_RS06715 c46e2a7f1782091b6c81200520bdbc55 667 Pfam PF02254 TrkA-N domain 409 522 2.6E-21 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 S40542_RS06715 c46e2a7f1782091b6c81200520bdbc55 667 Gene3D G3DSA:3.40.50.720 405 537 1.2E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 Gene3D G3DSA:1.10.1060.10 222 279 1.0E-7 T 11-11-2016 S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 SUPERFAMILY SSF54862 104 126 2.09E-31 T 11-11-2016 S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 SUPERFAMILY SSF54862 167 341 2.09E-31 T 11-11-2016 S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 355 470 4.3E-29 T 11-11-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 Gene3D G3DSA:2.60.40.10 355 470 1.7E-33 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 42 470 2.9E-163 T 11-11-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 271 282 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 Pfam PF13746 4Fe-4S dicluster domain 218 323 3.5E-42 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 Gene3D G3DSA:3.30.70.20 280 313 1.1E-5 T 11-11-2016 S40542_RS02140 ffab798d505d0c56e48b603334d0270b 473 Pfam PF12801 4Fe-4S binding domain 94 130 1.2E-6 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 Gene3D G3DSA:3.40.50.720 4 241 8.6E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 SUPERFAMILY SSF51735 4 241 3.28E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 65 76 9.7E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 9.7E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.7E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 9.7E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 128 9.7E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 9.7E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 240 4.6E-51 T 11-11-2016 S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 65 76 1.3E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 126 1.3E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS18255 a90c550c8e2ce99b470db53d00e3444e 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 157 1.3E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS04205 46e6d0a2981dd67892b04e0f2d812145 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-11-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site S40542_RS04205 46e6d0a2981dd67892b04e0f2d812145 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 9.1E-37 T 11-11-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 S40542_RS04205 46e6d0a2981dd67892b04e0f2d812145 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.9E-22 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS04205 46e6d0a2981dd67892b04e0f2d812145 107 Gene3D G3DSA:2.60.300.12 2 96 1.2E-34 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS04205 46e6d0a2981dd67892b04e0f2d812145 107 SUPERFAMILY SSF89360 1 96 1.57E-31 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS04205 46e6d0a2981dd67892b04e0f2d812145 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.0E-56 T 11-11-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 S40542_RS03350 2583604797d7c14b99a96a6e0f4a29e8 231 SUPERFAMILY SSF75217 5 178 6.54E-45 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS03350 2583604797d7c14b99a96a6e0f4a29e8 231 Gene3D G3DSA:3.40.1280.10 4 184 2.7E-46 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS03350 2583604797d7c14b99a96a6e0f4a29e8 231 Pfam PF00588 SpoU rRNA Methylase family 20 161 5.7E-33 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 S40542_RS03350 2583604797d7c14b99a96a6e0f4a29e8 231 Pfam PF12105 SpoU, rRNA methylase, C-terminal 165 219 1.2E-22 T 11-11-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 S40542_RS03350 2583604797d7c14b99a96a6e0f4a29e8 231 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 198 34.787 T 11-11-2016 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 S40542_RS20215 fba0290f783f0fcbd1a8569be041b48d 205 Gene3D G3DSA:1.10.10.10 93 165 3.3E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20215 fba0290f783f0fcbd1a8569be041b48d 205 SUPERFAMILY SSF46785 2 82 6.25E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20215 fba0290f783f0fcbd1a8569be041b48d 205 Gene3D G3DSA:1.10.10.10 2 85 2.8E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20215 fba0290f783f0fcbd1a8569be041b48d 205 SUPERFAMILY SSF46785 88 165 5.52E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20215 fba0290f783f0fcbd1a8569be041b48d 205 Pfam PF04337 Protein of unknown function, DUF480 3 153 9.0E-61 T 11-11-2016 IPR007432 Protein of unknown function DUF480 S40542_RS20215 fba0290f783f0fcbd1a8569be041b48d 205 Hamap MF_01584 UPF0502 protein YceH [yceH]. 3 201 32.328 T 11-11-2016 IPR007432 Protein of unknown function DUF480 S40542_RS00420 27a1364d3c1625dfe27bdffbd87753c4 155 PIRSF PIRSF005900 1 155 2.6E-41 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 S40542_RS00420 27a1364d3c1625dfe27bdffbd87753c4 155 Pfam PF00210 Ferritin-like domain 17 155 4.5E-25 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 S40542_RS00420 27a1364d3c1625dfe27bdffbd87753c4 155 SUPERFAMILY SSF47240 3 155 1.95E-40 T 11-11-2016 IPR009078 Ferritin-like superfamily S40542_RS00420 27a1364d3c1625dfe27bdffbd87753c4 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 1.1E-11 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 S40542_RS00420 27a1364d3c1625dfe27bdffbd87753c4 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 1.1E-11 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 S40542_RS00420 27a1364d3c1625dfe27bdffbd87753c4 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 1.1E-11 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 S40542_RS00420 27a1364d3c1625dfe27bdffbd87753c4 155 Gene3D G3DSA:1.20.1260.10 2 155 1.2E-52 T 11-11-2016 IPR012347 Ferritin-related S40542_RS00420 27a1364d3c1625dfe27bdffbd87753c4 155 ProSitePatterns PS00818 Dps protein family signature 1. 37 53 - T 11-11-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 SMART SM00471 41 153 1.0E-11 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 Pfam PF02824 TGS domain 389 448 3.5E-20 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 697 3.5E-256 T 11-11-2016 IPR004811 RelA/SpoT family GO:0015969 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 Pfam PF13328 HD domain 26 175 2.1E-51 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 SUPERFAMILY SSF109604 3 190 2.57E-74 T 11-11-2016 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 Pfam PF13291 ACT domain 621 698 1.6E-18 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 SUPERFAMILY SSF81271 376 448 8.34E-20 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 Gene3D G3DSA:3.10.20.30 388 449 1.8E-21 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 3.2E-34 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 Gene3D G3DSA:3.30.70.260 624 696 3.9E-9 T 11-11-2016 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 Gene3D G3DSA:3.30.460.10 178 324 2.3E-47 T 11-11-2016 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 SUPERFAMILY SSF81301 181 393 2.62E-60 T 11-11-2016 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 SUPERFAMILY SSF55021 625 698 1.29E-8 T 11-11-2016 S40542_RS03375 6a759b6ece807594b300f1b320d4785e 700 SMART SM00954 235 345 8.9E-57 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 S40542_RS15375 82cff5c32322ca11a7d5c11ab019f06e 839 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 173 4.0E-21 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS15375 82cff5c32322ca11a7d5c11ab019f06e 839 Pfam PF00593 TonB dependent receptor 527 837 5.3E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS15375 82cff5c32322ca11a7d5c11ab019f06e 839 Gene3D G3DSA:2.40.170.20 220 839 1.7E-96 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS15375 82cff5c32322ca11a7d5c11ab019f06e 839 Gene3D G3DSA:2.40.170.20 177 185 1.7E-96 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS15375 82cff5c32322ca11a7d5c11ab019f06e 839 SUPERFAMILY SSF56935 38 194 2.65E-113 T 11-11-2016 S40542_RS15375 82cff5c32322ca11a7d5c11ab019f06e 839 SUPERFAMILY SSF56935 296 839 2.65E-113 T 11-11-2016 S40542_RS15375 82cff5c32322ca11a7d5c11ab019f06e 839 SUPERFAMILY SSF56935 223 268 2.65E-113 T 11-11-2016 S40542_RS15375 82cff5c32322ca11a7d5c11ab019f06e 839 Gene3D G3DSA:2.170.130.10 51 176 6.6E-32 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 Pfam PF00005 ABC transporter 366 515 7.3E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 SUPERFAMILY SSF52540 342 586 1.38E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 SUPERFAMILY SSF90123 19 325 9.68E-74 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 12 586 8.3E-253 T 11-11-2016 IPR011918 ABC transporter, ATP-binding/permease protein S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 Gene3D G3DSA:3.40.50.300 347 578 6.7E-84 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 Gene3D G3DSA:1.20.1560.10 20 337 2.2E-76 T 11-11-2016 S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 Pfam PF00664 ABC transporter transmembrane region 32 299 1.8E-46 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS03045 2fa3e48953a9d686ee90dfdfd963c5fa 597 SMART SM00382 375 561 9.1E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 Gene3D G3DSA:3.40.50.2020 160 288 9.0E-54 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 2.7E-29 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-11-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 SUPERFAMILY SSF53271 69 306 5.35E-67 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 Gene3D G3DSA:3.40.50.2020 2 159 2.7E-74 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 SMART SM01400 4 121 1.3E-79 T 11-11-2016 S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 50.504 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.2E-127 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 S40542_RS17690 3c31b33d5deb50a19369755b6b1ea590 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 4.3E-50 T 11-11-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 S40542_RS18640 155a38d66255fbc0d86d8c2867ee2dab 368 Gene3D G3DSA:3.40.50.2000 164 301 2.2E-19 T 11-11-2016 S40542_RS18640 155a38d66255fbc0d86d8c2867ee2dab 368 Pfam PF00534 Glycosyl transferases group 1 159 307 3.0E-28 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 S40542_RS18640 155a38d66255fbc0d86d8c2867ee2dab 368 SUPERFAMILY SSF53756 29 336 5.83E-50 T 11-11-2016 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.2E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.2E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.2E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.2E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-11-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 39 3.0E-7 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 Pfam PF01165 Ribosomal protein S21 4 56 5.4E-23 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.25 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18005 905b7ecc5b1a6b45f57335f14a4ec23b 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 6.5E-25 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 Gene3D G3DSA:3.20.20.80 206 207 2.8E-50 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 Gene3D G3DSA:3.20.20.80 39 154 2.8E-50 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 Gene3D G3DSA:3.20.20.80 381 595 2.8E-50 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 Pfam PF00128 Alpha amylase, catalytic domain 390 562 8.1E-10 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 Pfam PF00128 Alpha amylase, catalytic domain 74 156 4.2E-6 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 SUPERFAMILY SSF51445 346 567 2.5E-57 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 SUPERFAMILY SSF51445 42 165 2.5E-57 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 Gene3D G3DSA:2.60.40.1180 615 692 8.8E-6 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta S40542_RS03070 347063b1905531c999b67c9a6f6192bb 709 SMART SM00642 42 592 8.9E-14 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 PRINTS PR00481 Cytosol aminopeptidase signature 335 355 1.4E-28 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 PRINTS PR00481 Cytosol aminopeptidase signature 253 270 1.4E-28 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 PRINTS PR00481 Cytosol aminopeptidase signature 275 296 1.4E-28 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 PRINTS PR00481 Cytosol aminopeptidase signature 313 334 1.4E-28 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 PRINTS PR00481 Cytosol aminopeptidase signature 367 382 1.4E-28 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 Gene3D G3DSA:3.40.630.10 159 506 1.1E-79 T 11-11-2016 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 173 504 5.9E-56 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 SUPERFAMILY SSF53187 168 504 5.96E-66 T 11-11-2016 S40542_RS05410 6cc756d005409a8ec1657ef5e7644ec1 510 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 339 346 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS19940 7ac84b14052c311ebc9e6d4bc53aa087 268 Pfam PF02311 AraC-like ligand binding domain 38 88 1.9E-5 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 S40542_RS19940 7ac84b14052c311ebc9e6d4bc53aa087 268 Gene3D G3DSA:2.60.120.10 21 99 9.3E-10 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS19940 7ac84b14052c311ebc9e6d4bc53aa087 268 SUPERFAMILY SSF46689 221 267 2.02E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19940 7ac84b14052c311ebc9e6d4bc53aa087 268 Gene3D G3DSA:1.10.10.60 165 221 1.8E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19940 7ac84b14052c311ebc9e6d4bc53aa087 268 Gene3D G3DSA:1.10.10.60 225 265 1.4E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19940 7ac84b14052c311ebc9e6d4bc53aa087 268 SUPERFAMILY SSF51182 33 193 3.11E-13 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS19940 7ac84b14052c311ebc9e6d4bc53aa087 268 Pfam PF12833 Helix-turn-helix domain 193 267 3.1E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS19940 7ac84b14052c311ebc9e6d4bc53aa087 268 SMART SM00342 184 266 3.1E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 Gene3D G3DSA:3.40.309.10 225 372 5.1E-38 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 38.889 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 1.2E-134 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 Gene3D G3DSA:3.40.605.10 373 414 7.9E-96 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 Gene3D G3DSA:3.40.605.10 4 222 7.9E-96 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 Pfam PF00171 Aldehyde dehydrogenase family 8 282 2.7E-16 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 SUPERFAMILY SSF53720 4 414 5.37E-110 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 PIRSF PIRSF000151 1 415 2.5E-163 T 11-11-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 S40542_RS04130 82fc4dffe45557489dbc86974df777ec 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 11-11-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 282 8.2E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 Gene3D G3DSA:3.30.565.10 293 446 2.5E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 SMART SM00448 459 571 3.0E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 SUPERFAMILY SSF52172 460 575 1.85E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 SUPERFAMILY SSF47384 215 287 1.29E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 Gene3D G3DSA:1.10.287.130 223 281 5.0E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 Pfam PF00072 Response regulator receiver domain 462 571 1.1E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 SMART SM00387 338 444 2.2E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 SMART SM00388 229 290 2.5E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 SUPERFAMILY SSF55874 290 444 1.44E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 1.0E-4 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 1.0E-4 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 1.0E-4 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 443 5.4E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01445 b55b4b0aeed4f5adb31beddfbea29915 584 Gene3D G3DSA:3.40.50.2300 453 575 1.0E-34 T 11-11-2016 S40542_RS09575 4026d45c0f378980526db20420883a5e 330 Pfam PF03150 Di-haem cytochrome c peroxidase 50 194 5.2E-52 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 S40542_RS09575 4026d45c0f378980526db20420883a5e 330 SUPERFAMILY SSF46626 38 181 6.18E-49 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09575 4026d45c0f378980526db20420883a5e 330 Gene3D G3DSA:1.10.760.10 186 322 8.1E-49 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09575 4026d45c0f378980526db20420883a5e 330 PIRSF PIRSF000294 1 330 1.2E-101 T 11-11-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 S40542_RS09575 4026d45c0f378980526db20420883a5e 330 SUPERFAMILY SSF46626 179 318 6.48E-32 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09575 4026d45c0f378980526db20420883a5e 330 Gene3D G3DSA:1.10.760.10 42 185 3.6E-54 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 SUPERFAMILY SSF47384 242 325 3.73E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 Gene3D G3DSA:1.10.287.130 254 320 2.8E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 485 9.0E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 2.7E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 2.7E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 440 2.7E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 2.7E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 SUPERFAMILY SSF55874 313 485 5.76E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 SUPERFAMILY SSF52172 503 618 2.42E-16 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 SMART SM00448 502 610 8.8E-6 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 SMART SM00448 656 772 3.8E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 SMART SM00388 259 324 2.0E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 SMART SM00387 371 487 4.8E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 Gene3D G3DSA:3.40.50.2300 503 615 3.2E-14 T 11-11-2016 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 SUPERFAMILY SSF52172 655 776 4.84E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 Pfam PF00072 Response regulator receiver domain 504 590 3.6E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 Pfam PF00072 Response regulator receiver domain 658 771 9.6E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 Gene3D G3DSA:3.40.50.2300 655 777 3.0E-38 T 11-11-2016 S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 Gene3D G3DSA:3.30.565.10 331 485 8.1E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03905 fddee579d20b15968d091e8fd1b48b76 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 323 9.4E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS18535 73d0d5a8a174f15ff45ecf1eee70d012 307 Gene3D G3DSA:3.40.50.170 2 217 3.4E-25 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS18535 73d0d5a8a174f15ff45ecf1eee70d012 307 Pfam PF02911 Formyl transferase, C-terminal domain 208 292 6.0E-17 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS18535 73d0d5a8a174f15ff45ecf1eee70d012 307 SUPERFAMILY SSF53328 1 206 7.06E-30 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS18535 73d0d5a8a174f15ff45ecf1eee70d012 307 Pfam PF00551 Formyl transferase 54 181 8.6E-13 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS18535 73d0d5a8a174f15ff45ecf1eee70d012 307 SUPERFAMILY SSF50486 208 293 2.67E-18 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 S40542_RS18535 73d0d5a8a174f15ff45ecf1eee70d012 307 Gene3D G3DSA:3.10.25.10 218 292 4.1E-17 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS06085 914543241cf4b330c3b72822e8843bc9 143 Pfam PF00460 Flagella basal body rod protein 7 32 7.0E-7 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 S40542_RS06085 914543241cf4b330c3b72822e8843bc9 143 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 95 138 5.6E-14 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain S40542_RS06085 914543241cf4b330c3b72822e8843bc9 143 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 142 1.4E-49 T 11-11-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 S40542_RS06085 914543241cf4b330c3b72822e8843bc9 143 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 6.9E-27 T 11-11-2016 IPR033248 Transketolase, C-terminal domain S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 SUPERFAMILY SSF52922 492 620 2.75E-31 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 SUPERFAMILY SSF52518 8 199 1.05E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 SUPERFAMILY SSF52518 243 381 1.05E-75 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 SMART SM00861 319 483 6.9E-63 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 Gene3D G3DSA:3.40.50.970 335 495 8.8E-37 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.831 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 Gene3D G3DSA:3.40.50.920 496 619 2.8E-35 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 615 7.6E-295 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 Gene3D G3DSA:3.40.50.970 242 334 6.5E-80 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 Gene3D G3DSA:3.40.50.970 26 201 6.5E-80 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 1.0E-121 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 6.5E-38 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 SUPERFAMILY SSF52518 316 504 8.1E-57 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS17890 813eea28e6b9a168ae58def3305635cf 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS09655 84fe5ad951d6cea2145e09ff771e22af 882 PIRSF PIRSF035905 4 878 3.9E-102 T 11-11-2016 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein S40542_RS09655 84fe5ad951d6cea2145e09ff771e22af 882 Pfam PF10101 Predicted membrane protein (DUF2339) 124 868 2.1E-99 T 11-11-2016 IPR019286 Protein of unknown function DUF2339, transmembrane S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 Gene3D G3DSA:3.50.50.60 351 425 4.7E-117 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 Gene3D G3DSA:3.50.50.60 4 242 4.7E-117 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 Gene3D G3DSA:1.20.58.100 454 557 4.4E-36 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-11-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 SUPERFAMILY SSF51905 6 259 5.28E-74 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 SUPERFAMILY SSF51905 359 427 5.28E-74 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 590 1.8E-35 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 Gene3D G3DSA:3.90.700.10 243 349 2.8E-40 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 590 6.6E-272 T 11-11-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 Gene3D G3DSA:4.10.80.40 558 590 3.1E-21 T 11-11-2016 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 590 3.1E-238 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 SUPERFAMILY SSF46977 454 590 1.96E-45 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 PIRSF PIRSF000171 1 582 3.7E-51 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 Pfam PF00890 FAD binding domain 9 405 3.2E-118 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12055 b097593138d05f695e057ac1a3daced4 590 SUPERFAMILY SSF56425 236 356 8.52E-42 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 294 8.6E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 455 1.1E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 SMART SM00387 342 457 8.6E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 2.2E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 2.2E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 2.2E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 2.2E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 SUPERFAMILY SSF47384 217 296 9.42E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 Pfam PF00072 Response regulator receiver domain 482 591 4.9E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 SUPERFAMILY SSF55874 302 452 2.62E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 SMART SM00448 480 594 7.4E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 Gene3D G3DSA:3.30.565.10 299 461 5.0E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 Gene3D G3DSA:3.40.50.2300 482 599 2.5E-23 T 11-11-2016 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 Gene3D G3DSA:1.10.287.130 225 294 2.5E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 SUPERFAMILY SSF52172 481 603 2.7E-23 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS19390 cfc5cd3b1f0bbe5f927f2ee54738020e 719 SMART SM00388 232 298 8.7E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 SUPERFAMILY SSF90123 4 300 1.03E-21 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 Pfam PF00005 ABC transporter 342 478 8.5E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 Gene3D G3DSA:3.40.50.300 321 530 6.7E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 SUPERFAMILY SSF52540 320 530 2.81E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 SMART SM00382 350 527 5.6E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 5 529 2.0E-126 T 11-11-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 Gene3D G3DSA:1.20.1560.10 4 301 6.6E-19 T 11-11-2016 S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS19740 9f3843464c57afd95dfc419c85e9995f 541 Pfam PF00664 ABC transporter transmembrane region 26 157 1.8E-5 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 Gene3D G3DSA:3.40.120.10 320 442 1.2E-34 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 440 3.3E-29 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 212 319 3.3E-17 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 SUPERFAMILY SSF53738 307 448 1.81E-30 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 1.1E-265 T 11-11-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 Gene3D G3DSA:3.40.120.10 32 227 9.3E-58 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 142 151 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 SUPERFAMILY SSF53738 28 237 2.07E-48 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 181 3.6E-35 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 SUPERFAMILY SSF53738 212 319 2.59E-9 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 SUPERFAMILY SSF55957 434 544 8.89E-19 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 Gene3D G3DSA:3.30.310.50 467 544 2.8E-26 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 1.9E-7 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS11755 cfb0fa9e650b204824757ff4084a5da5 545 Gene3D G3DSA:3.40.120.10 228 319 4.6E-42 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 Gene3D G3DSA:3.40.190.10 204 267 5.9E-9 T 11-11-2016 S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 Pfam PF03466 LysR substrate binding domain 88 288 1.8E-27 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 SUPERFAMILY SSF46785 1 85 1.0E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-20 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 Gene3D G3DSA:1.10.10.10 1 80 3.8E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 SUPERFAMILY SSF53850 88 290 2.99E-24 T 11-11-2016 S40542_RS15525 a27d77bbe42c0a0fc1a58ecea7a24674 297 Gene3D G3DSA:3.40.190.10 81 203 1.3E-17 T 11-11-2016 S40542_RS14220 956dc08f48cce11e95e893e123545dc7 91 SMART SM00411 1 90 2.4E-30 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS14220 956dc08f48cce11e95e893e123545dc7 91 SUPERFAMILY SSF47729 1 90 8.24E-29 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 S40542_RS14220 956dc08f48cce11e95e893e123545dc7 91 Gene3D G3DSA:4.10.520.10 1 90 2.3E-30 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 S40542_RS14220 956dc08f48cce11e95e893e123545dc7 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.1E-11 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS14220 956dc08f48cce11e95e893e123545dc7 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.1E-11 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS14220 956dc08f48cce11e95e893e123545dc7 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.1E-11 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS14220 956dc08f48cce11e95e893e123545dc7 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 3.0E-29 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS08785 5fb55663f1621d50d033e8ec978546b4 171 Pfam PF08281 Sigma-70, region 4 105 155 4.1E-13 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS08785 5fb55663f1621d50d033e8ec978546b4 171 SUPERFAMILY SSF88659 97 159 1.29E-13 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS08785 5fb55663f1621d50d033e8ec978546b4 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 159 1.1E-21 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS08785 5fb55663f1621d50d033e8ec978546b4 171 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 33 64 - T 11-11-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS08785 5fb55663f1621d50d033e8ec978546b4 171 Pfam PF04542 Sigma-70 region 2 11 77 3.0E-16 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS08785 5fb55663f1621d50d033e8ec978546b4 171 SUPERFAMILY SSF88946 4 88 1.73E-19 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS08785 5fb55663f1621d50d033e8ec978546b4 171 Gene3D G3DSA:1.10.10.10 99 160 5.0E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08785 5fb55663f1621d50d033e8ec978546b4 171 Gene3D G3DSA:1.10.1740.10 4 98 5.1E-22 T 11-11-2016 S40542_RS02375 327d61db9bb787d48778e01fc7892263 434 Gene3D G3DSA:1.25.40.10 10 53 8.9E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02375 327d61db9bb787d48778e01fc7892263 434 SUPERFAMILY SSF48452 10 53 6.17E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 SMART SM01358 43 296 1.3E-51 T 11-11-2016 IPR032255 Helical bimodular sensor domain S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 Gene3D G3DSA:3.30.450.20 389 500 2.2E-5 T 11-11-2016 S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 Gene3D G3DSA:3.30.450.20 519 632 3.1E-5 T 11-11-2016 S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 Pfam PF13426 PAS domain 664 721 0.54 T 11-11-2016 IPR000014 PAS domain S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 Pfam PF13426 PAS domain 534 634 0.08 T 11-11-2016 IPR000014 PAS domain S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 Pfam PF13188 PAS domain 391 425 0.0039 T 11-11-2016 IPR000014 PAS domain S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 SMART SM00283 863 1110 3.0E-89 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 Gene3D G3DSA:1.10.287.950 878 1082 1.9E-59 T 11-11-2016 S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 SUPERFAMILY SSF58104 830 1111 4.97E-70 T 11-11-2016 S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 921 1109 7.7E-61 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS13645 028ea983908ff8f727d1b2ce91c5a1fb 1123 SUPERFAMILY SSF55785 376 435 6.28E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS02410 c212ddfe0cd01b6fb244509522a4149a 340 SUPERFAMILY SSF56784 129 332 5.29E-43 T 11-11-2016 IPR023214 HAD-like domain S40542_RS02410 c212ddfe0cd01b6fb244509522a4149a 340 Gene3D G3DSA:3.40.50.1000 192 319 2.4E-32 T 11-11-2016 IPR023214 HAD-like domain S40542_RS02410 c212ddfe0cd01b6fb244509522a4149a 340 Pfam PF12710 haloacid dehalogenase-like hydrolase 200 297 2.0E-16 T 11-11-2016 S40542_RS02410 c212ddfe0cd01b6fb244509522a4149a 340 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 127 330 8.4E-72 T 11-11-2016 S40542_RS02410 c212ddfe0cd01b6fb244509522a4149a 340 Gene3D G3DSA:1.10.150.210 139 191 1.1E-20 T 11-11-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 S40542_RS02410 c212ddfe0cd01b6fb244509522a4149a 340 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 129 299 1.3E-27 T 11-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 Gene3D G3DSA:3.40.190.10 178 262 3.4E-28 T 11-11-2016 S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 Gene3D G3DSA:3.40.190.10 92 177 1.6E-8 T 11-11-2016 S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.7E-10 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 Pfam PF03466 LysR substrate binding domain 90 290 4.6E-37 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 Gene3D G3DSA:1.10.10.10 2 86 4.9E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 SUPERFAMILY SSF53850 91 295 8.69E-38 T 11-11-2016 S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.3E-21 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17640 465d753a4c5e75d9699b9ee13fdb58aa 297 SUPERFAMILY SSF46785 2 84 1.25E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS12645 df621e13901c3575099d5a0e7bbe6cb5 521 SMART SM00849 296 487 0.0019 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS12645 df621e13901c3575099d5a0e7bbe6cb5 521 SUPERFAMILY SSF56281 330 501 1.68E-17 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS12645 df621e13901c3575099d5a0e7bbe6cb5 521 Gene3D G3DSA:3.60.15.10 328 500 5.4E-18 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS17605 131306e190ae14d7659db43b20d10a93 788 SUPERFAMILY SSF51126 159 228 6.28E-7 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor S40542_RS17605 131306e190ae14d7659db43b20d10a93 788 SUPERFAMILY SSF51126 21 124 6.28E-7 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor S40542_RS17605 131306e190ae14d7659db43b20d10a93 788 Gene3D G3DSA:2.160.20.10 19 342 6.6E-10 T 11-11-2016 IPR012334 Pectin lyase fold S40542_RS17605 131306e190ae14d7659db43b20d10a93 788 Pfam PF05860 haemagglutination activity domain 15 119 8.6E-7 T 11-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal S40542_RS14700 50e70c07f380b25bf19848dea3d73c87 282 Gene3D G3DSA:3.20.20.410 1 269 2.6E-66 T 11-11-2016 IPR002763 Protein of unknown function DUF72 S40542_RS14700 50e70c07f380b25bf19848dea3d73c87 282 Pfam PF01904 Protein of unknown function DUF72 21 257 1.7E-50 T 11-11-2016 IPR002763 Protein of unknown function DUF72 S40542_RS14700 50e70c07f380b25bf19848dea3d73c87 282 SUPERFAMILY SSF117396 1 262 9.68E-67 T 11-11-2016 IPR002763 Protein of unknown function DUF72 S40542_RS12160 6147992887c53dc8a4e556d912c7431c 115 SUPERFAMILY SSF47226 3 111 5.76E-19 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS12160 6147992887c53dc8a4e556d912c7431c 115 Pfam PF01627 Hpt domain 24 101 3.3E-8 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS12160 6147992887c53dc8a4e556d912c7431c 115 Gene3D G3DSA:1.20.120.160 5 110 1.2E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.0E-37 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 11-11-2016 S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 11-11-2016 S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 11-11-2016 S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 Pfam PF00085 Thioredoxin 5 106 2.9E-33 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 PIRSF PIRSF000077 2 108 5.8E-43 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 Gene3D G3DSA:3.40.30.10 2 107 1.2E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS20035 eb90ad6c1d08e690fd4057656213fc85 108 SUPERFAMILY SSF52833 2 107 1.1E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS12515 fdff056cf5c7cbc533257780530ba07d 159 Pfam PF04266 ASCH domain 36 154 1.1E-26 T 11-11-2016 IPR007374 ASCH domain S40542_RS12515 fdff056cf5c7cbc533257780530ba07d 159 PIRSF PIRSF021320 6 157 4.7E-46 T 11-11-2016 IPR009326 Protein of unknown function DUF984 S40542_RS12515 fdff056cf5c7cbc533257780530ba07d 159 SMART SM01022 31 154 2.8E-38 T 11-11-2016 IPR007374 ASCH domain S40542_RS12515 fdff056cf5c7cbc533257780530ba07d 159 Gene3D G3DSA:3.10.400.10 13 155 1.2E-55 T 11-11-2016 S40542_RS12515 fdff056cf5c7cbc533257780530ba07d 159 SUPERFAMILY SSF88697 11 154 3.98E-48 T 11-11-2016 IPR015947 PUA-like domain S40542_RS04755 0cc732f3f74cc5ffef6764e0faebb318 105 Pfam PF00581 Rhodanese-like domain 9 96 1.5E-15 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS04755 0cc732f3f74cc5ffef6764e0faebb318 105 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 1 105 30.179 T 11-11-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 S40542_RS04755 0cc732f3f74cc5ffef6764e0faebb318 105 SUPERFAMILY SSF52821 3 97 2.49E-29 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS04755 0cc732f3f74cc5ffef6764e0faebb318 105 SMART SM00450 6 101 6.8E-20 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS04755 0cc732f3f74cc5ffef6764e0faebb318 105 Gene3D G3DSA:3.40.250.10 2 97 1.4E-28 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS04485 2692823798b478f31bf72d5ee3ac99ca 148 Pfam PF04364 DNA polymerase III chi subunit, HolC 6 141 2.8E-34 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 S40542_RS04485 2692823798b478f31bf72d5ee3ac99ca 148 Gene3D G3DSA:3.40.50.10110 5 145 3.4E-42 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 S40542_RS04485 2692823798b478f31bf72d5ee3ac99ca 148 SUPERFAMILY SSF102400 14 145 4.05E-39 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 S40542_RS17955 48704ce43f91dd63ae597143d3a1d19a 421 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 420 3.9E-111 T 11-11-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) S40542_RS17955 48704ce43f91dd63ae597143d3a1d19a 421 Gene3D G3DSA:2.40.160.60 25 420 3.9E-117 T 11-11-2016 S40542_RS17955 48704ce43f91dd63ae597143d3a1d19a 421 SUPERFAMILY SSF56935 23 420 2.93E-91 T 11-11-2016 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 153 9.2E-56 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 Gene3D G3DSA:3.40.50.720 1 161 3.2E-70 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 SMART SM00846 2 153 2.3E-88 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 4.7E-128 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 PIRSF PIRSF000149 1 333 2.3E-137 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 SUPERFAMILY SSF55347 153 314 5.36E-70 T 11-11-2016 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 Gene3D G3DSA:3.30.360.10 162 315 5.5E-73 T 11-11-2016 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 SUPERFAMILY SSF51735 2 173 1.29E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 313 5.5E-64 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 4.1E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 4.1E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 4.1E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.1E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS12240 9710639c27eee1f783293672f5c70ada 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.1E-37 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08665 878b43c704d9d5ae592d17ac89b17bd0 115 Gene3D G3DSA:3.40.30.10 1 115 2.8E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS08665 878b43c704d9d5ae592d17ac89b17bd0 115 SUPERFAMILY SSF52833 2 115 3.29E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS08665 878b43c704d9d5ae592d17ac89b17bd0 115 Pfam PF03960 ArsC family 6 114 8.3E-17 T 11-11-2016 IPR006660 Arsenate reductase-like S40542_RS08665 878b43c704d9d5ae592d17ac89b17bd0 115 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 4.9E-47 T 11-11-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 S40542_RS13730 5a0ac78200af64a5a9b106f71b811f93 273 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 266 6.4E-94 T 11-11-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 S40542_RS13730 5a0ac78200af64a5a9b106f71b811f93 273 Pfam PF08543 Phosphomethylpyrimidine kinase 20 264 2.0E-91 T 11-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 S40542_RS13730 5a0ac78200af64a5a9b106f71b811f93 273 SUPERFAMILY SSF53613 11 270 3.9E-79 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS13730 5a0ac78200af64a5a9b106f71b811f93 273 Gene3D G3DSA:3.40.1190.20 11 267 2.0E-97 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS14780 693c580310c9fbafdf788ef231cf9f77 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 313 9.9E-43 T 11-11-2016 IPR000160 GGDEF domain S40542_RS14780 693c580310c9fbafdf788ef231cf9f77 323 Gene3D G3DSA:3.30.450.20 14 131 1.1E-12 T 11-11-2016 S40542_RS14780 693c580310c9fbafdf788ef231cf9f77 323 SUPERFAMILY SSF55073 161 319 8.63E-48 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS14780 693c580310c9fbafdf788ef231cf9f77 323 Gene3D G3DSA:3.30.70.270 157 322 5.6E-51 T 11-11-2016 S40542_RS14780 693c580310c9fbafdf788ef231cf9f77 323 SUPERFAMILY SSF55785 13 87 2.97E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS14780 693c580310c9fbafdf788ef231cf9f77 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 317 1.8E-54 T 11-11-2016 IPR000160 GGDEF domain S40542_RS14780 693c580310c9fbafdf788ef231cf9f77 323 SMART SM00267 145 317 1.3E-55 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 44 987 1.0E-180 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 SUPERFAMILY SSF56935 447 516 4.35E-74 T 11-11-2016 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 SUPERFAMILY SSF56935 282 397 4.35E-74 T 11-11-2016 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 SUPERFAMILY SSF56935 585 755 4.35E-74 T 11-11-2016 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 SUPERFAMILY SSF56935 820 987 4.35E-74 T 11-11-2016 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 SUPERFAMILY SSF56935 46 232 4.35E-74 T 11-11-2016 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 Pfam PF00593 TonB dependent receptor 666 986 3.0E-24 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 Gene3D G3DSA:2.40.170.20 169 545 2.8E-53 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 Gene3D G3DSA:2.40.170.20 800 987 2.8E-53 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 Gene3D G3DSA:2.40.170.20 588 757 2.8E-53 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 164 3.1E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS10020 99109bfee765674ca02bb4e25d369167 988 Gene3D G3DSA:2.170.130.10 63 168 2.5E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07070 0d585d0fdca46527ee7e223818c00f9c 612 SUPERFAMILY SSF51445 39 515 1.15E-80 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS07070 0d585d0fdca46527ee7e223818c00f9c 612 SUPERFAMILY SSF51011 539 611 2.62E-7 T 11-11-2016 S40542_RS07070 0d585d0fdca46527ee7e223818c00f9c 612 Gene3D G3DSA:2.60.40.1180 538 611 2.7E-9 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta S40542_RS07070 0d585d0fdca46527ee7e223818c00f9c 612 Pfam PF16657 Maltogenic Amylase, C-terminal domain 539 604 1.1E-6 T 11-11-2016 IPR032091 Maltogenic Amylase, C-terminal S40542_RS07070 0d585d0fdca46527ee7e223818c00f9c 612 Pfam PF00128 Alpha amylase, catalytic domain 83 461 5.6E-21 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS07070 0d585d0fdca46527ee7e223818c00f9c 612 SMART SM00642 45 515 2.7E-7 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS07070 0d585d0fdca46527ee7e223818c00f9c 612 Gene3D G3DSA:3.20.20.80 22 514 1.9E-80 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS01650 3ecd855ab145e591810b6cd66793bcc0 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 45 342 37.057 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 S40542_RS01650 3ecd855ab145e591810b6cd66793bcc0 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 78 336 4.3E-84 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 S40542_RS01650 3ecd855ab145e591810b6cd66793bcc0 350 Gene3D G3DSA:3.40.50.300 118 277 6.0E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01650 3ecd855ab145e591810b6cd66793bcc0 350 Pfam PF03193 Protein of unknown function, DUF258 103 278 2.1E-56 T 11-11-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 S40542_RS01650 3ecd855ab145e591810b6cd66793bcc0 350 SUPERFAMILY SSF52540 117 338 6.31E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01650 3ecd855ab145e591810b6cd66793bcc0 350 Gene3D G3DSA:1.10.40.50 278 342 1.0E-23 T 11-11-2016 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 Gene3D G3DSA:3.40.50.10490 96 288 4.6E-82 T 11-11-2016 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 Gene3D G3DSA:3.40.50.10490 291 504 1.2E-127 T 11-11-2016 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 Gene3D G3DSA:3.40.50.10490 6 95 1.2E-127 T 11-11-2016 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 Pfam PF00342 Phosphoglucose isomerase 49 539 3.9E-215 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 SUPERFAMILY SSF53697 5 547 3.06E-201 T 11-11-2016 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 3.3E-50 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 3.3E-50 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 3.3E-50 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 3.3E-50 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 3.3E-50 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 3.3E-50 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 38.792 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS08700 59a55c32d17f41e2e32ead2c3dcd99c2 548 Gene3D G3DSA:1.10.1390.10 505 546 2.6E-19 T 11-11-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 Pfam PF00912 Transglycosylase 55 229 5.3E-62 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 Pfam PF17092 Penicillin-binding protein OB-like domain 317 425 4.7E-27 T 11-11-2016 IPR031376 Penicillin-binding protein, OB-like domain S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 SUPERFAMILY SSF53955 43 255 2.0E-76 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 747 3.4E-168 T 11-11-2016 S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 Pfam PF00905 Penicillin binding protein transpeptidase domain 430 693 5.6E-28 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 SUPERFAMILY SSF56601 423 795 1.39E-112 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 SUPERFAMILY SSF56601 211 233 1.39E-112 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 SUPERFAMILY SSF56601 262 314 1.39E-112 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 Gene3D G3DSA:3.40.710.10 423 794 1.3E-125 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 Gene3D G3DSA:3.40.710.10 232 314 1.3E-125 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 Gene3D G3DSA:1.10.3810.10 55 231 2.4E-71 T 11-11-2016 S40542_RS01345 2ac62f8e72eea704c3e3761d286e06fb 815 Gene3D G3DSA:2.40.50.140 349 422 1.2E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS17545 a646bd9ab1770668f6c271b7fc05cbbd 243 SUPERFAMILY SSF55315 6 92 2.82E-14 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like S40542_RS17545 a646bd9ab1770668f6c271b7fc05cbbd 243 SUPERFAMILY SSF75217 87 241 5.95E-35 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS17545 a646bd9ab1770668f6c271b7fc05cbbd 243 Gene3D G3DSA:3.40.1280.10 95 241 3.3E-39 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS17545 a646bd9ab1770668f6c271b7fc05cbbd 243 Pfam PF00588 SpoU rRNA Methylase family 102 236 6.3E-31 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 S40542_RS17545 a646bd9ab1770668f6c271b7fc05cbbd 243 Gene3D G3DSA:3.30.1330.30 1 93 9.3E-25 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like S40542_RS02610 9ea121d00dd8fe0440c64a4a90eb63c4 372 SUPERFAMILY SSF56281 106 354 2.61E-26 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS02610 9ea121d00dd8fe0440c64a4a90eb63c4 372 Pfam PF12706 Beta-lactamase superfamily domain 129 320 3.9E-29 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS02610 9ea121d00dd8fe0440c64a4a90eb63c4 372 PIRSF PIRSF038896 6 365 4.9E-67 T 11-11-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 S40542_RS02610 9ea121d00dd8fe0440c64a4a90eb63c4 372 Gene3D G3DSA:3.60.15.10 103 365 3.6E-63 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 Pfam PF00873 AcrB/AcrD/AcrF family 6 1013 5.4E-172 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 SUPERFAMILY SSF82714 707 791 1.44E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 Gene3D G3DSA:1.10.3850.10 282 494 2.3E-46 T 11-11-2016 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 Gene3D G3DSA:1.10.3850.10 797 1016 1.7E-47 T 11-11-2016 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 SUPERFAMILY SSF82866 788 1021 7.06E-41 T 11-11-2016 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 Gene3D G3DSA:3.30.2090.10 706 793 7.8E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 Gene3D G3DSA:3.30.2090.10 192 274 9.2E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 SUPERFAMILY SSF82866 298 495 4.32E-34 T 11-11-2016 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 Gene3D G3DSA:3.30.70.1430 40 128 8.4E-16 T 11-11-2016 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 SUPERFAMILY SSF82714 193 272 7.46E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 SUPERFAMILY SSF82693 275 332 4.71E-8 T 11-11-2016 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 SUPERFAMILY SSF82693 157 191 4.71E-8 T 11-11-2016 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.0E-36 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.0E-36 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.0E-36 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-36 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.0E-36 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.0E-36 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-36 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS16120 86dbb0bc904e38e8d99a9274038f9f90 1040 SUPERFAMILY SSF82693 40 128 3.82E-15 T 11-11-2016 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 944 1058 2.7E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Gene3D G3DSA:3.30.565.10 883 1057 4.5E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Gene3D G3DSA:1.10.287.130 822 882 3.0E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SUPERFAMILY SSF52172 1075 1190 1.85E-14 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SMART SM00387 943 1060 2.7E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF07495 Y_Y_Y domain 691 753 5.2E-20 T 11-11-2016 IPR011123 Two component regulator three Y S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF07494 Two component regulator propeller 433 450 0.0025 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF07494 Two component regulator propeller 20 39 0.0027 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF07494 Two component regulator propeller 520 541 0.014 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF07494 Two component regulator propeller 64 87 0.012 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF07494 Two component regulator propeller 472 494 0.013 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 832 895 1.4E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Gene3D G3DSA:3.40.50.2300 1076 1191 4.9E-15 T 11-11-2016 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SMART SM00388 831 896 8.3E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SMART SM00448 1218 1339 2.8E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SMART SM00448 1076 1187 0.0048 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SUPERFAMILY SSF52172 1218 1344 1.17E-37 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SUPERFAMILY SSF63829 393 632 1.31E-16 T 11-11-2016 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1044 1057 4.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1003 1013 4.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1020 1038 4.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 999 4.0E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SUPERFAMILY SSF47384 816 897 6.67E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SUPERFAMILY SSF55874 885 1055 1.26E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SUPERFAMILY SSF63829 22 227 1.47E-15 T 11-11-2016 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Gene3D G3DSA:3.40.50.2300 1208 1348 4.5E-45 T 11-11-2016 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Gene3D G3DSA:2.120.10.30 391 483 1.0E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Gene3D G3DSA:2.120.10.30 215 365 1.5E-9 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Gene3D G3DSA:2.120.10.30 484 646 1.4E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Gene3D G3DSA:2.120.10.30 12 143 7.5E-17 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SUPERFAMILY SSF63829 231 351 1.7E-15 T 11-11-2016 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 SUPERFAMILY SSF63829 402 460 1.7E-15 T 11-11-2016 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF00072 Response regulator receiver domain 1078 1187 1.3E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10325 f6802a7406a024e1b87ddb2e00ee903e 1351 Pfam PF00072 Response regulator receiver domain 1220 1339 1.9E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20415 904370a80602c751fafdf5a62c39610e 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 172 8.1E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS20415 904370a80602c751fafdf5a62c39610e 175 Pfam PF08281 Sigma-70, region 4 117 169 3.5E-14 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS20415 904370a80602c751fafdf5a62c39610e 175 SUPERFAMILY SSF88946 15 104 2.75E-11 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS20415 904370a80602c751fafdf5a62c39610e 175 Gene3D G3DSA:1.10.1740.10 20 88 2.6E-11 T 11-11-2016 S40542_RS20415 904370a80602c751fafdf5a62c39610e 175 Pfam PF04542 Sigma-70 region 2 19 86 1.8E-10 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS20415 904370a80602c751fafdf5a62c39610e 175 Gene3D G3DSA:1.10.10.10 113 173 6.6E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20415 904370a80602c751fafdf5a62c39610e 175 SUPERFAMILY SSF88659 94 173 7.63E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS20795 f4b63030a15a184c5529094c38d3f3e9 137 Pfam PF00825 Ribonuclease P 6 112 5.9E-31 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 S40542_RS20795 f4b63030a15a184c5529094c38d3f3e9 137 SUPERFAMILY SSF54211 6 113 1.04E-28 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS20795 f4b63030a15a184c5529094c38d3f3e9 137 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 9.7E-28 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 S40542_RS20795 f4b63030a15a184c5529094c38d3f3e9 137 Gene3D G3DSA:3.30.230.10 5 115 1.0E-32 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS20795 f4b63030a15a184c5529094c38d3f3e9 137 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.337 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 S40542_RS20795 f4b63030a15a184c5529094c38d3f3e9 137 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 8.0E-40 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 S40542_RS03295 3f0fa0e08213c4cc28fd1ae13841783d 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.0E-39 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03295 3f0fa0e08213c4cc28fd1ae13841783d 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-11-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS03295 3f0fa0e08213c4cc28fd1ae13841783d 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03295 3f0fa0e08213c4cc28fd1ae13841783d 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 6.2E-44 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03295 3f0fa0e08213c4cc28fd1ae13841783d 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.182 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS12310 41058b793d70d38d31e88313ff1da412 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 106 5.7E-7 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS12310 41058b793d70d38d31e88313ff1da412 123 Gene3D G3DSA:3.10.180.10 1 114 5.5E-20 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS12310 41058b793d70d38d31e88313ff1da412 123 SUPERFAMILY SSF54593 1 121 1.34E-22 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS13635 806603a2325b4c5fc9f588420984a75e 197 SUPERFAMILY SSF51206 27 145 3.8E-19 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS13635 806603a2325b4c5fc9f588420984a75e 197 Gene3D G3DSA:2.60.120.10 12 161 1.9E-31 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS13635 806603a2325b4c5fc9f588420984a75e 197 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 1.6E-7 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS09925 73eb41343b601252453026e73db461ce 1053 Gene3D G3DSA:3.40.390.10 222 342 3.0E-9 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS09925 73eb41343b601252453026e73db461ce 1053 SUPERFAMILY SSF49299 708 792 8.76E-21 T 11-11-2016 IPR000601 PKD domain S40542_RS09925 73eb41343b601252453026e73db461ce 1053 Pfam PF05572 Pregnancy-associated plasma protein-A 205 357 7.3E-54 T 11-11-2016 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: R-HSA-381426 S40542_RS09925 73eb41343b601252453026e73db461ce 1053 Gene3D G3DSA:2.60.40.670 714 791 8.1E-22 T 11-11-2016 IPR000601 PKD domain S40542_RS09925 73eb41343b601252453026e73db461ce 1053 Gene3D G3DSA:2.60.40.670 633 709 1.1E-19 T 11-11-2016 IPR000601 PKD domain S40542_RS09925 73eb41343b601252453026e73db461ce 1053 SUPERFAMILY SSF55486 220 352 3.42E-12 T 11-11-2016 S40542_RS09925 73eb41343b601252453026e73db461ce 1053 SMART SM00089 712 794 7.0E-23 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS09925 73eb41343b601252453026e73db461ce 1053 SMART SM00089 625 707 1.1E-17 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS09925 73eb41343b601252453026e73db461ce 1053 SUPERFAMILY SSF49299 624 705 6.8E-19 T 11-11-2016 IPR000601 PKD domain S40542_RS09925 73eb41343b601252453026e73db461ce 1053 Pfam PF00801 PKD domain 717 782 1.0E-16 T 11-11-2016 IPR000601 PKD domain S40542_RS09925 73eb41343b601252453026e73db461ce 1053 Pfam PF00801 PKD domain 642 696 1.5E-11 T 11-11-2016 IPR000601 PKD domain S40542_RS12260 589189cf0648e9c29f11f7575f2dfd5d 338 Gene3D G3DSA:3.40.367.20 120 317 2.5E-62 T 11-11-2016 S40542_RS12260 589189cf0648e9c29f11f7575f2dfd5d 338 TIGRFAM TIGR00749 glk: glucokinase 21 328 2.1E-78 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 S40542_RS12260 589189cf0648e9c29f11f7575f2dfd5d 338 Pfam PF02685 Glucokinase 20 332 4.0E-102 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 S40542_RS12260 589189cf0648e9c29f11f7575f2dfd5d 338 SUPERFAMILY SSF53067 19 333 2.43E-59 T 11-11-2016 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 11-11-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 Pfam PF00701 Dihydrodipicolinate synthetase family 13 279 1.7E-51 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 Gene3D G3DSA:3.20.20.70 12 286 2.3E-67 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 SUPERFAMILY SSF51569 12 283 7.85E-64 T 11-11-2016 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 8.6E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 8.6E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 8.6E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 PIRSF PIRSF001365 11 290 4.4E-58 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 13 284 7.4E-78 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 8 288 40.883 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 SMART SM01130 9 291 3.1E-68 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS01440 d37c5c4165403ffadfcd8d86ea882a41 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 11-11-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 SUPERFAMILY SSF52964 29 180 5.89E-36 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 Pfam PF04052 TolB amino-terminal domain 24 126 1.1E-29 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 Pfam PF07676 WD40-like Beta Propeller Repeat 302 336 4.8E-10 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 Pfam PF07676 WD40-like Beta Propeller Repeat 392 413 0.27 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 Pfam PF07676 WD40-like Beta Propeller Repeat 222 247 5.6E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 Pfam PF07676 WD40-like Beta Propeller Repeat 256 292 3.4E-4 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 Gene3D G3DSA:3.40.50.10070 24 171 1.7E-45 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 16 448 5.4E-151 T 11-11-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 SUPERFAMILY SSF69304 173 449 1.96E-54 T 11-11-2016 S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 Hamap MF_00671 Protein TolB [tolB]. 5 447 34.245 T 11-11-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 S40542_RS14660 9881469e3f058356cff5df477f67cb06 452 Gene3D G3DSA:2.130.10.10 172 449 1.1E-70 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 Pfam PF00551 Formyl transferase 6 184 2.1E-52 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 37.794 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 11-11-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 Pfam PF02911 Formyl transferase, C-terminal domain 207 302 2.8E-33 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 Gene3D G3DSA:3.10.25.10 210 304 2.9E-38 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 SUPERFAMILY SSF53328 4 207 8.5E-68 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 8.1E-106 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 Gene3D G3DSA:3.40.50.170 4 208 2.7E-74 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS00090 3fb6b4e430046167834c344bf74d77b6 314 SUPERFAMILY SSF50486 208 307 6.75E-35 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 SUPERFAMILY SSF52172 10 144 4.55E-22 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 Gene3D G3DSA:3.40.50.2300 8 137 1.5E-21 T 11-11-2016 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 Gene3D G3DSA:1.25.40.10 166 277 5.5E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 SMART SM00028 167 200 0.026 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 SMART SM00028 389 422 450.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 SMART SM00028 234 267 22.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 SMART SM00028 448 481 25.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 SMART SM00448 9 125 2.4E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 Pfam PF00072 Response regulator receiver domain 11 125 1.3E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 SUPERFAMILY SSF48452 360 492 1.33E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 SUPERFAMILY SSF48452 165 279 6.41E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 Gene3D G3DSA:1.25.40.10 448 493 1.9E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17515 c60e16cbde1caee9262ec50008a4b738 542 Gene3D G3DSA:1.25.40.10 303 437 7.2E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02605 910637762326f5b931b17e260c1b49be 615 Gene3D G3DSA:1.25.40.10 465 555 4.5E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02605 910637762326f5b931b17e260c1b49be 615 Gene3D G3DSA:1.25.40.10 286 401 4.5E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02605 910637762326f5b931b17e260c1b49be 615 Pfam PF00486 Transcriptional regulatory protein, C terminal 22 90 6.1E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS02605 910637762326f5b931b17e260c1b49be 615 SMART SM00862 21 91 7.3E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS02605 910637762326f5b931b17e260c1b49be 615 SUPERFAMILY SSF48452 481 551 1.58E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02605 910637762326f5b931b17e260c1b49be 615 SUPERFAMILY SSF48452 330 368 1.58E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02605 910637762326f5b931b17e260c1b49be 615 Gene3D G3DSA:1.10.10.10 5 92 4.1E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02605 910637762326f5b931b17e260c1b49be 615 SUPERFAMILY SSF46894 3 92 1.19E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS00530 742406280f75899acc6bdd5103e38b1b 401 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 396 1.0E-129 T 11-11-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 S40542_RS00530 742406280f75899acc6bdd5103e38b1b 401 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 401 167.082 T 11-11-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 S40542_RS00530 742406280f75899acc6bdd5103e38b1b 401 SUPERFAMILY SSF56112 3 396 4.67E-84 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS00530 742406280f75899acc6bdd5103e38b1b 401 Pfam PF01636 Phosphotransferase enzyme family 33 263 8.5E-12 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase S40542_RS00530 742406280f75899acc6bdd5103e38b1b 401 PIRSF PIRSF031134 1 401 4.0E-146 T 11-11-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 S40542_RS00530 742406280f75899acc6bdd5103e38b1b 401 Gene3D G3DSA:3.90.1200.10 203 277 4.0E-9 T 11-11-2016 S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 Gene3D G3DSA:1.10.10.10 1 79 3.0E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 Pfam PF03466 LysR substrate binding domain 88 283 2.3E-18 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 SUPERFAMILY SSF46785 1 82 5.69E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 SUPERFAMILY SSF53850 89 285 1.52E-18 T 11-11-2016 S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.6E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.6E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.6E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.3E-22 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS03780 211e60a541758ca10565ecb627ff3259 296 Gene3D G3DSA:3.40.190.10 84 197 3.0E-14 T 11-11-2016 S40542_RS01735 7593ecd25d678a336b066df5e3227f6d 181 Pfam PF08281 Sigma-70, region 4 124 174 1.1E-15 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS01735 7593ecd25d678a336b066df5e3227f6d 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 176 4.3E-28 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS01735 7593ecd25d678a336b066df5e3227f6d 181 Gene3D G3DSA:1.10.10.10 124 179 1.2E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01735 7593ecd25d678a336b066df5e3227f6d 181 Gene3D G3DSA:1.10.1740.10 11 104 1.5E-31 T 11-11-2016 S40542_RS01735 7593ecd25d678a336b066df5e3227f6d 181 SUPERFAMILY SSF88946 10 103 2.55E-29 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS01735 7593ecd25d678a336b066df5e3227f6d 181 SUPERFAMILY SSF88659 124 179 8.04E-13 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS01735 7593ecd25d678a336b066df5e3227f6d 181 Pfam PF04542 Sigma-70 region 2 30 96 1.3E-18 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS07445 e9d6da534c9415515712290504f24edb 531 Pfam PF13449 Esterase-like activity of phytase 129 495 6.1E-55 T 11-11-2016 IPR027372 Phytase-like domain S40542_RS07445 e9d6da534c9415515712290504f24edb 531 Gene3D G3DSA:2.120.10.30 253 423 4.2E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS09350 50371ad4ff2403cdc3c9f776ec0207e8 384 SUPERFAMILY SSF51197 6 289 1.51E-73 T 11-11-2016 S40542_RS09350 50371ad4ff2403cdc3c9f776ec0207e8 384 Gene3D G3DSA:2.60.120.650 6 208 5.3E-42 T 11-11-2016 S40542_RS09350 50371ad4ff2403cdc3c9f776ec0207e8 384 Pfam PF08007 Cupin superfamily protein 11 309 1.8E-93 T 11-11-2016 IPR003347 JmjC domain S40542_RS09350 50371ad4ff2403cdc3c9f776ec0207e8 384 SMART SM00558 94 218 2.0E-7 T 11-11-2016 IPR003347 JmjC domain S40542_RS08070 8651bad57c8dbf962002f5a582f69928 191 SUPERFAMILY SSF55729 4 176 2.85E-31 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS08070 8651bad57c8dbf962002f5a582f69928 191 Gene3D G3DSA:3.40.630.30 5 191 2.4E-48 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS08070 8651bad57c8dbf962002f5a582f69928 191 Pfam PF13302 Acetyltransferase (GNAT) domain 12 150 1.9E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS19670 4a2cbd0e0f8e2d3b240bcc5fe6448caa 153 SUPERFAMILY SSF54637 10 146 1.44E-32 T 11-11-2016 IPR029069 HotDog domain S40542_RS19670 4a2cbd0e0f8e2d3b240bcc5fe6448caa 153 Gene3D G3DSA:3.10.129.10 2 148 1.1E-46 T 11-11-2016 IPR029069 HotDog domain S40542_RS19670 4a2cbd0e0f8e2d3b240bcc5fe6448caa 153 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 141 6.4E-36 T 11-11-2016 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 S40542_RS19670 4a2cbd0e0f8e2d3b240bcc5fe6448caa 153 Pfam PF03061 Thioesterase superfamily 57 134 5.5E-13 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 S40542_RS03195 8d80b91be7ade24d4bff387b8a3f6dff 187 Gene3D G3DSA:3.40.80.10 4 181 5.7E-68 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 S40542_RS03195 8d80b91be7ade24d4bff387b8a3f6dff 187 SUPERFAMILY SSF55846 4 181 2.62E-64 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 S40542_RS03195 8d80b91be7ade24d4bff387b8a3f6dff 187 SMART SM00644 16 167 6.8E-50 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 S40542_RS03195 8d80b91be7ade24d4bff387b8a3f6dff 187 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 4.8E-20 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 SUPERFAMILY SSF56235 2 234 1.29E-71 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 Pfam PF13522 Glutamine amidotransferase domain 63 181 7.8E-22 T 11-11-2016 S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 Gene3D G3DSA:3.40.50.10490 245 443 5.3E-70 T 11-11-2016 S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 Pfam PF01380 SIS domain 459 588 9.5E-28 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 Pfam PF01380 SIS domain 291 417 3.5E-32 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 606 40.365 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 SUPERFAMILY SSF53697 246 606 2.78E-112 T 11-11-2016 S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 Gene3D G3DSA:3.40.50.10490 444 606 2.9E-66 T 11-11-2016 S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 Gene3D G3DSA:3.60.20.10 2 239 5.0E-77 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS20510 54ffd1adcec669580ce37ede40178c65 606 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 606 3.3E-259 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 S40542_RS20765 dd489e145b20f1a16aaa406bffe30ccc 723 Gene3D G3DSA:1.25.40.10 267 511 7.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20765 dd489e145b20f1a16aaa406bffe30ccc 723 Gene3D G3DSA:1.25.40.10 512 643 8.2E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20765 dd489e145b20f1a16aaa406bffe30ccc 723 Gene3D G3DSA:1.10.10.10 4 97 4.9E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20765 dd489e145b20f1a16aaa406bffe30ccc 723 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 94 2.8E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS20765 dd489e145b20f1a16aaa406bffe30ccc 723 SMART SM00862 19 95 2.1E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS20765 dd489e145b20f1a16aaa406bffe30ccc 723 SUPERFAMILY SSF48452 269 642 6.42E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20765 dd489e145b20f1a16aaa406bffe30ccc 723 SUPERFAMILY SSF46894 2 95 1.42E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS10260 ef54392fdf28d33717c020fd90a4f106 160 SMART SM01001 1 152 3.0E-103 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 S40542_RS10260 ef54392fdf28d33717c020fd90a4f106 160 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 31.922 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 S40542_RS10260 ef54392fdf28d33717c020fd90a4f106 160 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 1.6E-66 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 S40542_RS10260 ef54392fdf28d33717c020fd90a4f106 160 Pfam PF00731 AIR carboxylase 3 150 6.2E-65 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 S40542_RS10260 ef54392fdf28d33717c020fd90a4f106 160 PIRSF PIRSF001338 1 159 4.9E-67 T 11-11-2016 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 S40542_RS10260 ef54392fdf28d33717c020fd90a4f106 160 SUPERFAMILY SSF52255 2 157 2.35E-66 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 S40542_RS10260 ef54392fdf28d33717c020fd90a4f106 160 Gene3D G3DSA:3.40.50.7700 1 157 1.1E-74 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 S40542_RS03640 b96e742308143cb9106d4dbc45667cd3 147 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 109 133 - T 11-11-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site S40542_RS03640 b96e742308143cb9106d4dbc45667cd3 147 SUPERFAMILY SSF109635 6 105 1.31E-35 T 11-11-2016 S40542_RS03640 b96e742308143cb9106d4dbc45667cd3 147 SUPERFAMILY SSF57716 106 144 2.99E-9 T 11-11-2016 S40542_RS03640 b96e742308143cb9106d4dbc45667cd3 147 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 27 135 1.2E-49 T 11-11-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 S40542_RS03640 b96e742308143cb9106d4dbc45667cd3 147 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 106 138 6.1E-10 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 S40542_RS03640 b96e742308143cb9106d4dbc45667cd3 147 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 23 145 28.919 T 11-11-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 355 1.7E-140 T 11-11-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 1.9E-86 T 11-11-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 Gene3D G3DSA:3.30.70.1400 66 129 1.9E-32 T 11-11-2016 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 Gene3D G3DSA:2.40.30.110 280 357 4.1E-25 T 11-11-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 Gene3D G3DSA:3.30.1360.120 4 65 1.2E-23 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 350 2.2E-18 T 11-11-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 355 42.424 T 11-11-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 Gene3D G3DSA:3.30.1360.120 130 231 2.6E-27 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 PIRSF PIRSF006487 1 359 2.7E-84 T 11-11-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 SUPERFAMILY SSF101790 271 357 1.03E-22 T 11-11-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain S40542_RS02575 e4a43e5b0c5f203c3f0619ee16f08e5a 360 SUPERFAMILY SSF103025 4 275 1.02E-90 T 11-11-2016 S40542_RS07970 13d8f66e5a72f1a7bf7ea9b4731a1a7b 513 Pfam PF04450 Peptidase of plants and bacteria 276 501 4.4E-39 T 11-11-2016 IPR007541 Uncharacterised protein family, basic secretory protein S40542_RS07970 13d8f66e5a72f1a7bf7ea9b4731a1a7b 513 SUPERFAMILY SSF49785 40 166 4.25E-15 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS07970 13d8f66e5a72f1a7bf7ea9b4731a1a7b 513 Gene3D G3DSA:2.60.120.260 41 167 1.2E-14 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS07970 13d8f66e5a72f1a7bf7ea9b4731a1a7b 513 Pfam PF00754 F5/8 type C domain 41 163 1.6E-12 T 11-11-2016 IPR000421 Coagulation factor 5/8 C-terminal domain S40542_RS18550 c7ec4a33448bc8f9947fc6c96090d0f4 315 Gene3D G3DSA:3.30.360.10 130 313 7.0E-27 T 11-11-2016 S40542_RS18550 c7ec4a33448bc8f9947fc6c96090d0f4 315 SUPERFAMILY SSF51735 3 176 3.41E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18550 c7ec4a33448bc8f9947fc6c96090d0f4 315 SUPERFAMILY SSF55347 125 244 1.83E-10 T 11-11-2016 S40542_RS18550 c7ec4a33448bc8f9947fc6c96090d0f4 315 Gene3D G3DSA:3.40.50.720 2 129 7.5E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18550 c7ec4a33448bc8f9947fc6c96090d0f4 315 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 7.9E-23 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 S40542_RS11010 caf90ab034b2e6f685fa511e7fd128ac 284 SUPERFAMILY SSF55620 1 152 3.0E-23 T 11-11-2016 S40542_RS11010 caf90ab034b2e6f685fa511e7fd128ac 284 Gene3D G3DSA:3.30.479.10 15 145 1.1E-17 T 11-11-2016 S40542_RS11010 caf90ab034b2e6f685fa511e7fd128ac 284 Gene3D G3DSA:3.30.479.10 146 282 1.8E-17 T 11-11-2016 S40542_RS11010 caf90ab034b2e6f685fa511e7fd128ac 284 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 66 1.6E-6 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 S40542_RS11010 caf90ab034b2e6f685fa511e7fd128ac 284 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 144 280 2.5E-8 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 S40542_RS11010 caf90ab034b2e6f685fa511e7fd128ac 284 SUPERFAMILY SSF55620 146 283 9.45E-25 T 11-11-2016 S40542_RS04515 df1f3b0efecb2e220e87ca2cab6b316a 602 SMART SM00387 484 596 1.8E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04515 df1f3b0efecb2e220e87ca2cab6b316a 602 SUPERFAMILY SSF55874 432 592 2.62E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04515 df1f3b0efecb2e220e87ca2cab6b316a 602 Gene3D G3DSA:3.30.565.10 446 592 1.5E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04515 df1f3b0efecb2e220e87ca2cab6b316a 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 573 3.8E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS04515 df1f3b0efecb2e220e87ca2cab6b316a 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 3.8E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS04515 df1f3b0efecb2e220e87ca2cab6b316a 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 3.8E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS04515 df1f3b0efecb2e220e87ca2cab6b316a 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 490 592 1.4E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04515 df1f3b0efecb2e220e87ca2cab6b316a 602 SUPERFAMILY SSF47384 353 423 4.51E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 SUPERFAMILY SSF53623 101 309 1.83E-53 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 SUPERFAMILY SSF53244 313 448 1.92E-34 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 1.4E-140 T 11-11-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 Pfam PF08245 Mur ligase middle domain 105 291 5.4E-49 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 395 4.1E-15 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 Gene3D G3DSA:3.40.1390.10 1 80 5.3E-23 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 SUPERFAMILY SSF63418 1 97 1.22E-25 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 Gene3D G3DSA:3.40.1190.10 82 310 1.9E-72 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 33.255 T 11-11-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 Gene3D G3DSA:3.90.190.20 313 450 2.7E-39 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS18760 a21ff12d98c8d22f18daaa3ed3e70184 460 Pfam PF01225 Mur ligase family, catalytic domain 24 79 2.9E-8 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 SUPERFAMILY SSF49313 1423 1515 9.42E-15 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 Gene3D G3DSA:2.60.40.10 1424 1516 2.6E-15 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 Gene3D G3DSA:2.60.40.10 1517 1608 1.3E-16 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 SMART SM00736 1518 1609 0.0027 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 SMART SM00736 1425 1517 5.7E-9 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 SUPERFAMILY SSF49313 1515 1607 1.1E-13 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 SUPERFAMILY SSF56925 2923 3098 7.69E-5 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 SUPERFAMILY SSF141072 2284 2378 2.35E-12 T 11-11-2016 S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 Pfam PF16184 Cadherin-like 613 708 3.1E-7 T 11-11-2016 S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1170 1257 0.0017 T 11-11-2016 IPR010221 VCBS repeat S40542_RS13690 a4e0a156fe2133468e51564ad0a2fa6d 3098 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1639 1723 1.4E-6 T 11-11-2016 IPR010221 VCBS repeat S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 Pfam PF00072 Response regulator receiver domain 29 138 1.8E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 SUPERFAMILY SSF141868 482 725 2.22E-82 T 11-11-2016 IPR001633 EAL domain S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 Pfam PF11849 Domain of unknown function (DUF3369) 149 311 3.8E-28 T 11-11-2016 IPR021800 Domain of unknown function DUF3369 S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 SUPERFAMILY SSF55073 320 460 3.53E-18 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 SMART SM00267 304 465 7.8E-8 T 11-11-2016 IPR000160 GGDEF domain S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 SMART SM00052 468 720 9.4E-103 T 11-11-2016 IPR001633 EAL domain S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 SUPERFAMILY SSF52172 28 189 4.7E-13 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 Pfam PF00990 Diguanylate cyclase, GGDEF domain 315 460 1.0E-18 T 11-11-2016 IPR000160 GGDEF domain S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 Gene3D G3DSA:3.40.50.2300 28 163 9.9E-14 T 11-11-2016 S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 Pfam PF00563 EAL domain 482 715 1.5E-68 T 11-11-2016 IPR001633 EAL domain S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 Gene3D G3DSA:3.20.20.450 480 726 2.0E-88 T 11-11-2016 IPR001633 EAL domain S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 Gene3D G3DSA:3.30.70.270 317 470 2.7E-18 T 11-11-2016 S40542_RS19290 0c705d0c7cdd1efb119811c02e151a58 731 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 313 460 4.8E-11 T 11-11-2016 IPR000160 GGDEF domain S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Gene3D G3DSA:1.10.268.10 363 498 2.3E-47 T 11-11-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 861 0.0 T 11-11-2016 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Gene3D G3DSA:3.30.1360.40 236 333 7.6E-39 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 3.7E-155 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Gene3D G3DSA:3.90.199.10 34 216 9.0E-86 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 SMART SM00434 11 500 4.2E-301 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 689 2.3E-11 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 585 1.6E-9 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 815 860 1.0E-10 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 732 758 2.1E-5 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 638 3.7E-10 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 694 709 0.28 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 765 810 4.8E-14 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 862 24.553 T 11-11-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 Gene3D G3DSA:2.120.10.90 532 861 1.1E-139 T 11-11-2016 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 SUPERFAMILY SSF101904 534 872 1.44E-108 T 11-11-2016 S40542_RS09475 ef6b6bf41e84d755178929d582085f2e 891 SUPERFAMILY SSF56719 30 522 1.19E-184 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 Pfam PF13533 Biotin-lipoyl like 68 113 8.9E-6 T 11-11-2016 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 27 445 4.6E-103 T 11-11-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 Gene3D G3DSA:2.40.50.100 294 328 2.5E-17 T 11-11-2016 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 Gene3D G3DSA:2.40.50.100 69 99 2.5E-17 T 11-11-2016 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 SUPERFAMILY SSF111369 56 136 1.07E-9 T 11-11-2016 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 ProSitePatterns PS00543 HlyD family secretion proteins signature. 409 431 - T 11-11-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 Pfam PF13437 HlyD family secretion protein 297 399 1.7E-14 T 11-11-2016 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 35 58 7.4E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 409 424 7.4E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 309 330 7.4E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 342 366 7.4E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 444 7.4E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 7.4E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS10120 da9b4c2f918fbb1cd793d0f739175f56 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 389 7.4E-49 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS09725 fb87ec4b42f4a61c7c7ac07ddbe43470 413 SUPERFAMILY SSF51338 354 389 8.94E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09725 fb87ec4b42f4a61c7c7ac07ddbe43470 413 SUPERFAMILY SSF51338 24 76 8.94E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09725 fb87ec4b42f4a61c7c7ac07ddbe43470 413 Pfam PF01979 Amidohydrolase family 242 388 1.8E-10 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS09725 fb87ec4b42f4a61c7c7ac07ddbe43470 413 Gene3D G3DSA:2.30.40.10 22 128 1.4E-16 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09725 fb87ec4b42f4a61c7c7ac07ddbe43470 413 SUPERFAMILY SSF51556 213 353 2.72E-8 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS09725 fb87ec4b42f4a61c7c7ac07ddbe43470 413 Gene3D G3DSA:2.30.40.10 294 389 4.9E-15 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS09285 8ebed22ce3ea9d320638e17c86d7fb38 409 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 2 406 7.6E-119 T 11-11-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 S40542_RS09285 8ebed22ce3ea9d320638e17c86d7fb38 409 Pfam PF02687 FtsX-like permease family 270 402 1.8E-18 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS09285 8ebed22ce3ea9d320638e17c86d7fb38 409 Pfam PF12704 MacB-like periplasmic core domain 28 202 8.1E-12 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS01235 da36ff2cbfd5e89b2230dc3b40f00096 456 SMART SM00729 51 271 1.3E-50 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 S40542_RS01235 da36ff2cbfd5e89b2230dc3b40f00096 456 PIRSF PIRSF000167 6 453 2.2E-166 T 11-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 S40542_RS01235 da36ff2cbfd5e89b2230dc3b40f00096 456 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 7 456 7.5E-184 T 11-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 S40542_RS01235 da36ff2cbfd5e89b2230dc3b40f00096 456 Gene3D G3DSA:3.80.30.20 53 281 8.7E-33 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe S40542_RS01235 da36ff2cbfd5e89b2230dc3b40f00096 456 SUPERFAMILY SSF102114 7 443 2.35E-138 T 11-11-2016 S40542_RS01235 da36ff2cbfd5e89b2230dc3b40f00096 456 Pfam PF04055 Radical SAM superfamily 56 227 7.1E-21 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS01235 da36ff2cbfd5e89b2230dc3b40f00096 456 Pfam PF06969 HemN C-terminal domain 362 428 2.8E-8 T 11-11-2016 IPR010723 HemN, C-terminal S40542_RS14125 0c8ceafb29c37309b7cc2e4ecf31ad35 159 Gene3D G3DSA:1.10.10.10 10 80 3.3E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14125 0c8ceafb29c37309b7cc2e4ecf31ad35 159 SUPERFAMILY SSF46785 10 147 2.36E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14125 0c8ceafb29c37309b7cc2e4ecf31ad35 159 Pfam PF01475 Ferric uptake regulator family 18 138 4.3E-8 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 Pfam PF00128 Alpha amylase, catalytic domain 90 322 1.7E-14 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 Gene3D G3DSA:3.20.20.80 29 381 8.6E-95 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 PRINTS PR00110 Alpha-amylase signature 74 91 1.7E-28 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 PRINTS PR00110 Alpha-amylase signature 196 207 1.7E-28 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 PRINTS PR00110 Alpha-amylase signature 282 294 1.7E-28 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 PRINTS PR00110 Alpha-amylase signature 224 242 1.7E-28 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 PRINTS PR00110 Alpha-amylase signature 106 117 1.7E-28 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 SUPERFAMILY SSF51011 383 471 3.96E-32 T 11-11-2016 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 Gene3D G3DSA:2.60.40.1180 385 471 7.3E-34 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 SMART SM00632 387 472 1.0E-41 T 11-11-2016 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 390 469 3.0E-14 T 11-11-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 SUPERFAMILY SSF51445 30 379 3.26E-77 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS10055 0ae1c4de2d0f5678de9f260a55f46620 669 SMART SM00642 31 377 6.4E-79 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS15700 fde8c14bfa6b370289f1ea974100f23f 366 Pfam PF01264 Chorismate synthase 10 345 1.9E-138 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 S40542_RS15700 fde8c14bfa6b370289f1ea974100f23f 366 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.1E-135 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 S40542_RS15700 fde8c14bfa6b370289f1ea974100f23f 366 Gene3D G3DSA:3.60.150.10 9 355 2.6E-154 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 S40542_RS15700 fde8c14bfa6b370289f1ea974100f23f 366 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 S40542_RS15700 fde8c14bfa6b370289f1ea974100f23f 366 SUPERFAMILY SSF103263 4 356 1.96E-145 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 S40542_RS15700 fde8c14bfa6b370289f1ea974100f23f 366 PIRSF PIRSF001456 3 361 5.3E-137 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 S40542_RS15700 fde8c14bfa6b370289f1ea974100f23f 366 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.75 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 S40542_RS15700 fde8c14bfa6b370289f1ea974100f23f 366 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 SUPERFAMILY SSF51735 5 159 9.12E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 Gene3D G3DSA:3.30.360.10 145 316 2.9E-82 T 11-11-2016 S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 1.4E-64 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 4.2E-30 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 336 2.1E-135 T 11-11-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 SMART SM00859 6 121 6.4E-40 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 38.061 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 PIRSF PIRSF000148 4 338 2.5E-133 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 Gene3D G3DSA:3.40.50.720 1 144 5.2E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS17070 ffbbcdfd993f863ef71592eebf8010da 338 SUPERFAMILY SSF55347 131 321 5.66E-77 T 11-11-2016 S40542_RS00560 e71754959ec05da55f8f4e1224fef868 379 Gene3D G3DSA:3.90.1150.10 249 378 8.1E-30 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS00560 e71754959ec05da55f8f4e1224fef868 379 Pfam PF00155 Aminotransferase class I and II 26 376 1.1E-61 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS00560 e71754959ec05da55f8f4e1224fef868 379 Gene3D G3DSA:3.40.640.10 38 248 2.2E-64 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS00560 e71754959ec05da55f8f4e1224fef868 379 SUPERFAMILY SSF53383 4 378 7.05E-100 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 Gene3D G3DSA:3.40.190.10 33 119 5.1E-17 T 11-11-2016 S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 Gene3D G3DSA:3.40.190.10 215 259 5.1E-17 T 11-11-2016 S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 SUPERFAMILY SSF53850 34 260 1.27E-34 T 11-11-2016 S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 Gene3D G3DSA:1.10.530.10 278 450 4.1E-40 T 11-11-2016 S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 Pfam PF01464 Transglycosylase SLT domain 287 396 6.8E-26 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 260 4.1E-32 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 SMART SM00062 38 261 1.0E-23 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 SUPERFAMILY SSF53955 240 413 1.33E-38 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 455 46.709 T 11-11-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 S40542_RS04670 6dc5a12d2f4281e79abc355b8225edff 460 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 304 332 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 S40542_RS03040 2e9e2d05f530377fdf070317a4f087b3 348 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 37 313 4.5E-46 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS03040 2e9e2d05f530377fdf070317a4f087b3 348 SUPERFAMILY SSF53686 21 333 4.32E-68 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS03040 2e9e2d05f530377fdf070317a4f087b3 348 Gene3D G3DSA:3.40.50.1100 142 330 2.8E-38 T 11-11-2016 S40542_RS03040 2e9e2d05f530377fdf070317a4f087b3 348 Gene3D G3DSA:3.40.50.1100 45 141 8.2E-24 T 11-11-2016 S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 Gene3D G3DSA:3.40.50.720 11 253 3.7E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 SUPERFAMILY SSF51735 13 253 8.65E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 253 4.3E-42 T 11-11-2016 S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 206 225 8.3E-43 T 11-11-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 102 122 8.3E-43 T 11-11-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 82 99 8.3E-43 T 11-11-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 20 37 8.3E-43 T 11-11-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 167 190 8.3E-43 T 11-11-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 S40542_RS19765 359b6b8c60c2d0b035d1fd3325155932 254 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 232 251 8.3E-43 T 11-11-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 274 316 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 SUPERFAMILY SSF52317 1 199 2.91E-30 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 Gene3D G3DSA:3.40.50.880 5 226 1.2E-31 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 Gene3D G3DSA:1.10.10.60 227 274 6.9E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 SMART SM00342 236 320 1.2E-30 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 SUPERFAMILY SSF46689 273 321 1.52E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 Gene3D G3DSA:1.10.10.60 275 321 2.2E-20 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 Pfam PF01965 DJ-1/PfpI family 43 146 9.8E-9 T 11-11-2016 IPR002818 DJ-1/PfpI S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 SUPERFAMILY SSF46689 220 271 4.66E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 Pfam PF12833 Helix-turn-helix domain 243 321 1.4E-25 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 304 7.5E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS09245 a6235ac8948d9ac49fbb860904a33dd9 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 320 7.5E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS06215 3793c00e98c73948f9e24c939f9498ca 481 Gene3D G3DSA:3.40.50.620 2 111 2.9E-22 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS06215 3793c00e98c73948f9e24c939f9498ca 481 Pfam PF00294 pfkB family carbohydrate kinase 165 465 1.1E-28 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB S40542_RS06215 3793c00e98c73948f9e24c939f9498ca 481 SUPERFAMILY SSF52374 3 95 9.29E-17 T 11-11-2016 S40542_RS06215 3793c00e98c73948f9e24c939f9498ca 481 Pfam PF01467 Cytidylyltransferase-like 7 91 2.3E-14 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS06215 3793c00e98c73948f9e24c939f9498ca 481 SUPERFAMILY SSF53613 163 465 1.87E-36 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS06215 3793c00e98c73948f9e24c939f9498ca 481 Gene3D G3DSA:3.40.1190.20 161 470 1.6E-38 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS06215 3793c00e98c73948f9e24c939f9498ca 481 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 3.1E-12 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS01305 a6bb376c132f09ac95104c5109d16ee9 172 PIRSF PIRSF039093 1 172 7.7E-88 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 S40542_RS01305 a6bb376c132f09ac95104c5109d16ee9 172 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.827 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 S40542_RS01305 a6bb376c132f09ac95104c5109d16ee9 172 Gene3D G3DSA:3.60.20.10 2 172 2.7E-84 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS01305 a6bb376c132f09ac95104c5109d16ee9 172 Pfam PF00227 Proteasome subunit 2 166 9.7E-22 T 11-11-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 S40542_RS01305 a6bb376c132f09ac95104c5109d16ee9 172 SUPERFAMILY SSF56235 1 171 2.24E-57 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS01305 a6bb376c132f09ac95104c5109d16ee9 172 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.5E-86 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 S40542_RS09275 abab4f7f01b8664c86ea345e22e12159 400 Pfam PF02687 FtsX-like permease family 269 391 2.7E-18 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS09275 abab4f7f01b8664c86ea345e22e12159 400 Pfam PF12704 MacB-like periplasmic core domain 27 190 7.7E-12 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS09275 abab4f7f01b8664c86ea345e22e12159 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 400 4.1E-115 T 11-11-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 S40542_RS13555 5de72991c229ca91056f498beaf28717 253 SUPERFAMILY SSF52788 1 126 1.14E-31 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS13555 5de72991c229ca91056f498beaf28717 253 Gene3D G3DSA:1.10.10.10 128 220 9.6E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS13555 5de72991c229ca91056f498beaf28717 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 178 193 1.6E-18 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS13555 5de72991c229ca91056f498beaf28717 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 164 175 1.6E-18 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS13555 5de72991c229ca91056f498beaf28717 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 193 208 1.6E-18 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS13555 5de72991c229ca91056f498beaf28717 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 144 159 1.6E-18 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS13555 5de72991c229ca91056f498beaf28717 253 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 127 7.4E-19 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS13555 5de72991c229ca91056f498beaf28717 253 SMART SM00418 142 221 4.5E-18 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS13555 5de72991c229ca91056f498beaf28717 253 Gene3D G3DSA:3.40.50.270 1 127 3.4E-33 T 11-11-2016 S40542_RS13555 5de72991c229ca91056f498beaf28717 253 SMART SM00226 1 129 1.3E-20 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily S40542_RS13555 5de72991c229ca91056f498beaf28717 253 Pfam PF01022 Bacterial regulatory protein, arsR family 149 196 3.0E-9 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS13555 5de72991c229ca91056f498beaf28717 253 SUPERFAMILY SSF46785 134 220 8.79E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS06270 eef7fc6b8dc36cba070e94df8366c29b 219 SUPERFAMILY SSF53335 37 218 6.81E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS06270 eef7fc6b8dc36cba070e94df8366c29b 219 Gene3D G3DSA:3.40.50.150 53 209 1.7E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS06270 eef7fc6b8dc36cba070e94df8366c29b 219 Pfam PF13649 Methyltransferase domain 78 165 1.5E-15 T 11-11-2016 S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 SUPERFAMILY SSF55653 60 149 8.63E-25 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.624 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 147 1.8E-24 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 7.2E-21 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.1E-53 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 Gene3D G3DSA:3.40.5.10 1 52 2.6E-24 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 Gene3D G3DSA:3.10.430.100 61 149 2.2E-27 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 SUPERFAMILY SSF55658 1 57 8.89E-18 T 11-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal S40542_RS01705 ab7fb9c22394309439ddc1353c5b60d3 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS16825 f5a95a6080598d741e6c47bb8a2352da 133 Pfam PF04024 PspC domain 6 64 1.8E-18 T 11-11-2016 IPR007168 Phage shock protein, PspC, N-terminal S40542_RS16825 f5a95a6080598d741e6c47bb8a2352da 133 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 5 133 4.5E-46 T 11-11-2016 IPR014320 Phage shock protein, PspC S40542_RS10105 e525f12d211331ea7edc988e04830272 208 PIRSF PIRSF006324 1 207 2.4E-44 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS10105 e525f12d211331ea7edc988e04830272 208 Pfam PF01810 LysE type translocator 16 205 5.6E-25 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS16175 a2f420c37e6b3b49d4c4f109a60860e9 337 Gene3D G3DSA:3.40.50.720 168 284 3.8E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS16175 a2f420c37e6b3b49d4c4f109a60860e9 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.6E-33 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 S40542_RS16175 a2f420c37e6b3b49d4c4f109a60860e9 337 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 S40542_RS16175 a2f420c37e6b3b49d4c4f109a60860e9 337 SMART SM00829 8 334 2.6E-7 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 S40542_RS16175 a2f420c37e6b3b49d4c4f109a60860e9 337 Gene3D G3DSA:3.90.180.10 1 167 2.3E-68 T 11-11-2016 IPR011032 GroES-like S40542_RS16175 a2f420c37e6b3b49d4c4f109a60860e9 337 Pfam PF00107 Zinc-binding dehydrogenase 175 300 1.5E-32 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 S40542_RS16175 a2f420c37e6b3b49d4c4f109a60860e9 337 SUPERFAMILY SSF50129 1 159 1.25E-55 T 11-11-2016 IPR011032 GroES-like S40542_RS16175 a2f420c37e6b3b49d4c4f109a60860e9 337 SUPERFAMILY SSF51735 138 304 1.74E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS24060 e7d947e19653493a73150cd0095de816 308 Pfam PF12860 PAS fold 239 307 9.7E-23 T 11-11-2016 S40542_RS24060 e7d947e19653493a73150cd0095de816 308 SUPERFAMILY SSF55785 223 286 2.27E-6 T 11-11-2016 IPR000014 PAS domain S40542_RS24060 e7d947e19653493a73150cd0095de816 308 Gene3D G3DSA:3.30.450.20 224 283 1.2E-6 T 11-11-2016 S40542_RS08225 80468143d559e71063bef01f0337a681 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 52 9.7E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS08225 80468143d559e71063bef01f0337a681 199 Gene3D G3DSA:1.10.10.60 41 55 5.0E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08225 80468143d559e71063bef01f0337a681 199 SUPERFAMILY SSF46689 3 69 6.16E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08225 80468143d559e71063bef01f0337a681 199 SUPERFAMILY SSF48498 78 190 1.64E-19 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal S40542_RS08225 80468143d559e71063bef01f0337a681 199 Gene3D G3DSA:1.10.10.60 3 40 8.8E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08225 80468143d559e71063bef01f0337a681 199 Gene3D G3DSA:1.10.357.10 56 191 5.3E-39 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS01100 622a5d9d070b1ad1ea17552958a3b13d 415 SUPERFAMILY SSF111369 182 287 4.58E-6 T 11-11-2016 S40542_RS01100 622a5d9d070b1ad1ea17552958a3b13d 415 Gene3D G3DSA:2.40.50.100 227 263 2.7E-10 T 11-11-2016 S40542_RS01100 622a5d9d070b1ad1ea17552958a3b13d 415 Gene3D G3DSA:2.40.50.100 70 105 2.7E-10 T 11-11-2016 S40542_RS01100 622a5d9d070b1ad1ea17552958a3b13d 415 Pfam PF13437 HlyD family secretion protein 235 323 1.2E-11 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF52777 9 153 4.34E-15 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:3.30.300.30 2356 2471 1.5E-41 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:3.30.300.30 846 961 1.3E-44 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SMART SM00823 Phosphopantetheine attachment site 2468 2536 0.0093 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SMART SM00823 Phosphopantetheine attachment site 958 1026 4.4E-4 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF52777 2549 2720 2.0E-30 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF52777 192 409 1.09E-13 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:2.30.38.10 764 840 2.4E-19 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:2.30.38.10 2267 2351 5.6E-27 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF56801 410 971 1.57E-140 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF56801 1901 2481 9.16E-153 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2840 2985 1.0E-25 T 11-11-2016 IPR010060 Non-ribosomal peptide synthase S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 ProSitePatterns PS00455 Putative AMP-binding domain signature. 594 605 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF00550 Phosphopantetheine attachment site 960 1022 1.7E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF00550 Phosphopantetheine attachment site 2470 2530 6.7E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF52777 1484 1659 1.67E-27 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2095 2106 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF52777 1047 1226 8.34E-24 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF52777 1662 1905 7.56E-34 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF47336 950 1022 3.53E-19 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 468 875 2.1E-107 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1963 2385 1.0E-125 T 11-11-2016 IPR010071 Amino acid adenylation domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:1.10.1200.10 962 1024 3.4E-27 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:1.10.1200.10 2472 2538 1.4E-24 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:3.40.50.980 601 756 7.9E-43 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:3.40.50.980 2102 2265 1.1E-48 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:3.40.50.980 1937 2101 7.5E-41 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Gene3D G3DSA:3.40.50.980 439 600 7.1E-32 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF00501 AMP-binding enzyme 447 851 8.4E-80 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF00501 AMP-binding enzyme 1942 2361 8.8E-94 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF00668 Condensation domain 4 260 1.1E-15 T 11-11-2016 IPR001242 Condensation domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF00668 Condensation domain 2550 2834 1.4E-48 T 11-11-2016 IPR001242 Condensation domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF00668 Condensation domain 1048 1317 6.3E-43 T 11-11-2016 IPR001242 Condensation domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF00668 Condensation domain 1478 1779 3.9E-52 T 11-11-2016 IPR001242 Condensation domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF13193 AMP-binding enzyme C-terminal domain 2369 2443 4.1E-11 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 Pfam PF13193 AMP-binding enzyme C-terminal domain 859 933 7.4E-11 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF52777 2731 2960 2.11E-22 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF52777 1214 1442 5.11E-26 T 11-11-2016 S40542_RS13750 496b7dcdace937e1f15ede476576d00e 3009 SUPERFAMILY SSF47336 2460 2533 1.44E-17 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 SMART SM01231 369 429 2.5E-19 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Gene3D G3DSA:3.30.565.10 432 616 1.7E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 SUPERFAMILY SSF47226 6 127 4.58E-33 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 SUPERFAMILY SSF55874 432 615 7.99E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Pfam PF01584 CheW-like domain 623 751 4.8E-23 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 533 3.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 595 3.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 571 3.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 614 3.0E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 SUPERFAMILY SSF47384 370 430 2.63E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Pfam PF01627 Hpt domain 8 100 1.7E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 370 429 1.8E-13 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 616 7.9E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Gene3D G3DSA:2.30.30.40 705 748 3.0E-21 T 11-11-2016 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Gene3D G3DSA:2.30.30.40 617 638 3.0E-21 T 11-11-2016 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Gene3D G3DSA:1.10.287.560 369 430 1.4E-20 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 SUPERFAMILY SSF50341 616 749 3.53E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Gene3D G3DSA:1.20.120.160 4 143 2.0E-44 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 SMART SM00073 6 103 3.9E-24 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 Gene3D G3DSA:2.40.50.180 641 704 7.3E-12 T 11-11-2016 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 SMART SM00260 609 749 1.1E-34 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS06470 18cf8ad9b4c5d4eba883bede57083ccc 755 SMART SM00387 474 617 1.1E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 SMART SM00836 584 687 6.4E-4 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 25.77 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 5.5E-279 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 550 1.4E-206 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.1E-35 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 7.1E-35 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.1E-35 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 7.1E-35 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 7.1E-35 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 SUPERFAMILY SSF109604 338 492 8.63E-14 T 11-11-2016 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 Gene3D G3DSA:1.10.730.10 583 678 5.6E-7 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS00030 00e05b1c01e9aad1ddea607576558734 689 Pfam PF05746 DALR anticodon binding domain 581 681 1.6E-10 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 S40542_RS16710 191241560f95401af5f8c77e38201824 140 Pfam PF14352 Domain of unknown function (DUF4402) 14 140 1.3E-12 T 11-11-2016 IPR025514 Protein of unknown function DUF4402 S40542_RS02015 4589bf926f3c5bc1f9a74b65bf629bde 245 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 3 242 1.8E-72 T 11-11-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 S40542_RS02015 4589bf926f3c5bc1f9a74b65bf629bde 245 Gene3D G3DSA:3.40.50.1820 5 243 5.5E-41 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02015 4589bf926f3c5bc1f9a74b65bf629bde 245 SUPERFAMILY SSF53474 5 242 3.35E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02015 4589bf926f3c5bc1f9a74b65bf629bde 245 Pfam PF12697 Alpha/beta hydrolase family 5 238 8.6E-16 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 Gene3D G3DSA:2.60.40.360 271 356 8.8E-6 T 11-11-2016 IPR008962 PapD-like S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 Pfam PF02839 Carbohydrate binding domain 375 416 3.8E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 SUPERFAMILY SSF51055 373 420 3.79E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 54 69 2.0E-13 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 202 214 2.0E-13 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 110 124 2.0E-13 T 11-11-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 SMART SM00495 374 419 3.4E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 Gene3D G3DSA:2.40.10.10 109 148 4.2E-10 T 11-11-2016 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 SMART SM00020 25 252 1.4E-65 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 Pfam PF00089 Trypsin 26 252 5.6E-54 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 SUPERFAMILY SSF50494 18 255 4.28E-66 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 203 214 - T 11-11-2016 IPR033116 Serine proteases, trypsin family, serine active site S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 Gene3D G3DSA:2.10.10.20 373 420 5.6E-14 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 Gene3D G3DSA:2.40.10.10 22 108 1.5E-23 T 11-11-2016 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 64 69 - T 11-11-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 S40542_RS19960 4b9e7453e46b39d2615df39adaaf7750 427 Gene3D G3DSA:2.40.10.10 149 246 1.9E-32 T 11-11-2016 S40542_RS05500 4cfcd9ced486db219a60c25725c3f0c0 161 Gene3D G3DSA:1.10.3760.10 76 145 1.8E-5 T 11-11-2016 IPR027416 YutG-like domain S40542_RS05500 4cfcd9ced486db219a60c25725c3f0c0 161 PIRSF PIRSF006162 3 159 1.4E-46 T 11-11-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 S40542_RS05500 4cfcd9ced486db219a60c25725c3f0c0 161 SUPERFAMILY SSF101307 7 152 6.15E-43 T 11-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 S40542_RS05500 4cfcd9ced486db219a60c25725c3f0c0 161 Pfam PF04608 Phosphatidylglycerophosphatase A 14 152 1.5E-48 T 11-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 278 3.5E-99 T 11-11-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 Gene3D G3DSA:3.40.366.10 186 279 2.7E-64 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 Gene3D G3DSA:3.40.366.10 4 116 2.7E-64 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 SUPERFAMILY SSF52151 179 282 3.4E-63 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 SUPERFAMILY SSF52151 3 116 3.4E-63 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 Pfam PF00698 Acyl transferase domain 3 279 9.8E-36 T 11-11-2016 IPR014043 Acyl transferase S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 289 1.4E-41 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 SUPERFAMILY SSF55048 120 186 2.09E-11 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 S40542_RS13260 5fb10b25f1d9344171f09e6f4f81078c 370 Gene3D G3DSA:3.30.70.250 118 185 5.9E-15 T 11-11-2016 S40542_RS18485 c58a0c059858595a014570ef44b73d67 355 Gene3D G3DSA:3.40.50.720 2 191 1.2E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18485 c58a0c059858595a014570ef44b73d67 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 325 2.7E-102 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18485 c58a0c059858595a014570ef44b73d67 355 SUPERFAMILY SSF51735 1 348 4.54E-95 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18485 c58a0c059858595a014570ef44b73d67 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 340 2.7E-154 T 11-11-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 S40542_RS18485 c58a0c059858595a014570ef44b73d67 355 Gene3D G3DSA:3.90.25.10 192 345 2.0E-53 T 11-11-2016 S40542_RS07775 78d630bf3a52e97a615252e5b840e788 152 SUPERFAMILY SSF52172 9 139 3.42E-30 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07775 78d630bf3a52e97a615252e5b840e788 152 Gene3D G3DSA:3.40.50.2300 8 135 8.9E-34 T 11-11-2016 S40542_RS07775 78d630bf3a52e97a615252e5b840e788 152 SMART SM00448 7 132 2.8E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07775 78d630bf3a52e97a615252e5b840e788 152 Pfam PF00072 Response regulator receiver domain 9 132 1.0E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS12375 0fd472f6950bdbeefdcdc8e752cc522b 282 Pfam PF06481 COX Aromatic Rich Motif 234 276 3.6E-10 T 11-11-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 S40542_RS12375 0fd472f6950bdbeefdcdc8e752cc522b 282 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 142 219 6.9E-9 T 11-11-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12375 0fd472f6950bdbeefdcdc8e752cc522b 282 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 11 234 2.2E-103 T 11-11-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 S40542_RS12375 0fd472f6950bdbeefdcdc8e752cc522b 282 SUPERFAMILY SSF49503 118 274 9.56E-50 T 11-11-2016 IPR008972 Cupredoxin S40542_RS12375 0fd472f6950bdbeefdcdc8e752cc522b 282 Gene3D G3DSA:1.10.287.90 24 108 3.3E-31 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12375 0fd472f6950bdbeefdcdc8e752cc522b 282 SUPERFAMILY SSF81464 14 112 5.56E-23 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12375 0fd472f6950bdbeefdcdc8e752cc522b 282 PIRSF PIRSF000292 1 282 6.3E-122 T 11-11-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 S40542_RS12375 0fd472f6950bdbeefdcdc8e752cc522b 282 Gene3D G3DSA:2.60.40.420 118 274 1.1E-41 T 11-11-2016 IPR008972 Cupredoxin S40542_RS14450 7f4dc4580a591d538612ee4bc64dee62 320 Gene3D G3DSA:3.10.290.10 21 69 7.7E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS14450 7f4dc4580a591d538612ee4bc64dee62 320 Pfam PF01479 S4 domain 21 67 2.7E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS14450 7f4dc4580a591d538612ee4bc64dee62 320 SUPERFAMILY SSF55174 20 71 9.16E-9 T 11-11-2016 S40542_RS14450 7f4dc4580a591d538612ee4bc64dee62 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS14450 7f4dc4580a591d538612ee4bc64dee62 320 Pfam PF00849 RNA pseudouridylate synthase 102 250 3.8E-35 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS14450 7f4dc4580a591d538612ee4bc64dee62 320 SUPERFAMILY SSF55120 95 315 8.32E-64 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS14450 7f4dc4580a591d538612ee4bc64dee62 320 SMART SM00363 21 86 2.8E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS14450 7f4dc4580a591d538612ee4bc64dee62 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 315 4.5E-88 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS16340 babd58f4912950758f082c2a35e1b672 227 SUPERFAMILY SSF52540 1 222 4.13E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16340 babd58f4912950758f082c2a35e1b672 227 Gene3D G3DSA:3.40.50.300 1 221 1.2E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16340 babd58f4912950758f082c2a35e1b672 227 Pfam PF00005 ABC transporter 22 169 7.2E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS16340 babd58f4912950758f082c2a35e1b672 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS16340 babd58f4912950758f082c2a35e1b672 227 SMART SM00382 30 224 6.4E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS13075 2a92153a7e1341ebfbcc9466d45b17e9 498 Pfam PF00264 Common central domain of tyrosinase 42 141 1.1E-13 T 11-11-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 S40542_RS13075 2a92153a7e1341ebfbcc9466d45b17e9 498 Pfam PF00264 Common central domain of tyrosinase 183 233 8.2E-16 T 11-11-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 S40542_RS13075 2a92153a7e1341ebfbcc9466d45b17e9 498 Gene3D G3DSA:1.10.1280.10 8 153 3.2E-18 T 11-11-2016 IPR008922 Uncharacterised domain, di-copper centre S40542_RS13075 2a92153a7e1341ebfbcc9466d45b17e9 498 Gene3D G3DSA:1.10.1280.10 160 297 1.1E-19 T 11-11-2016 IPR008922 Uncharacterised domain, di-copper centre S40542_RS13075 2a92153a7e1341ebfbcc9466d45b17e9 498 ProSitePatterns PS00498 Tyrosinase and hemocyanins CuB-binding region signature. 215 226 - T 11-11-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 S40542_RS13075 2a92153a7e1341ebfbcc9466d45b17e9 498 PRINTS PR00092 Tyrosinase copper-binding domain signature 214 232 1.1E-9 T 11-11-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 S40542_RS13075 2a92153a7e1341ebfbcc9466d45b17e9 498 PRINTS PR00092 Tyrosinase copper-binding domain signature 94 111 1.1E-9 T 11-11-2016 IPR002227 Tyrosinase copper-binding domain GO:0008152|GO:0016491 S40542_RS13075 2a92153a7e1341ebfbcc9466d45b17e9 498 SUPERFAMILY SSF48056 19 247 8.5E-39 T 11-11-2016 IPR008922 Uncharacterised domain, di-copper centre S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 SUPERFAMILY SSF63380 224 442 9.83E-54 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 Pfam PF00667 FAD binding domain 225 421 6.7E-26 T 11-11-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 Gene3D G3DSA:3.40.50.80 453 595 2.0E-60 T 11-11-2016 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 SUPERFAMILY SSF52343 441 596 8.91E-51 T 11-11-2016 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 Gene3D G3DSA:3.40.50.360 48 201 1.0E-45 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 Gene3D G3DSA:1.20.990.10 276 380 1.5E-18 T 11-11-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 Gene3D G3DSA:2.40.30.10 381 452 1.0E-34 T 11-11-2016 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 Gene3D G3DSA:2.40.30.10 223 275 1.0E-34 T 11-11-2016 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 416 425 1.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 545 553 1.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 383 390 1.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 487 1.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 453 472 1.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 265 275 1.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 522 538 1.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 491 502 1.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 Pfam PF00258 Flavodoxin 60 182 3.5E-30 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 SUPERFAMILY SSF52218 56 199 2.92E-46 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 Pfam PF00175 Oxidoreductase NAD-binding domain 454 560 7.0E-21 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00369 Flavodoxin signature 59 72 4.3E-14 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00369 Flavodoxin signature 139 149 4.3E-14 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00369 Flavodoxin signature 163 182 4.3E-14 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PRINTS PR00369 Flavodoxin signature 107 118 4.3E-14 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 S40542_RS07910 40bf1ea3743d6e3b92469a2e5122487f 596 PIRSF PIRSF000207 6 596 9.0E-215 T 11-11-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS10515 07b21f1165ddef6f7d63cd8e50bcf6e7 140 Pfam PF05069 Phage virion morphogenesis family 15 137 1.5E-19 T 11-11-2016 IPR006522 Phage virion morphogensis protein S40542_RS10515 07b21f1165ddef6f7d63cd8e50bcf6e7 140 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 27 125 4.3E-14 T 11-11-2016 IPR006522 Phage virion morphogensis protein S40542_RS04370 85d08eb54f2abba712dbd451efe3987e 393 SUPERFAMILY SSF116734 2 203 8.83E-45 T 11-11-2016 S40542_RS04370 85d08eb54f2abba712dbd451efe3987e 393 SUPERFAMILY SSF116734 210 387 2.45E-35 T 11-11-2016 S40542_RS04370 85d08eb54f2abba712dbd451efe3987e 393 Pfam PF01420 Type I restriction modification DNA specificity domain 3 181 1.7E-18 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 S40542_RS04370 85d08eb54f2abba712dbd451efe3987e 393 Pfam PF01420 Type I restriction modification DNA specificity domain 214 369 1.5E-13 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 S40542_RS12400 b5e6c0b650e70c342478c868ec6a5d34 201 SUPERFAMILY SSF52833 41 199 8.63E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS12400 b5e6c0b650e70c342478c868ec6a5d34 201 Gene3D G3DSA:3.40.30.10 25 200 6.8E-46 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS12400 b5e6c0b650e70c342478c868ec6a5d34 201 Pfam PF02630 SCO1/SenC 18 183 1.3E-35 T 11-11-2016 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 SUPERFAMILY SSF52540 325 555 6.38E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 15 556 1.3E-219 T 11-11-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 Gene3D G3DSA:3.40.50.300 331 559 1.0E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 SMART SM00382 357 543 9.9E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 SUPERFAMILY SSF90123 11 319 3.66E-48 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 Pfam PF00664 ABC transporter transmembrane region 28 278 2.5E-18 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 Gene3D G3DSA:1.20.1560.10 12 316 3.0E-45 T 11-11-2016 S40542_RS20445 7e252f0ce8454583a1ce7a25bba1661d 569 Pfam PF00005 ABC transporter 348 494 2.6E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS17315 2d578b823eaf023d12dcc6a5fe5605c0 217 Gene3D G3DSA:3.40.30.10 9 91 3.1E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS17315 2d578b823eaf023d12dcc6a5fe5605c0 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 74 1.2E-11 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 S40542_RS17315 2d578b823eaf023d12dcc6a5fe5605c0 217 Gene3D G3DSA:1.20.1050.10 92 204 1.5E-37 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS17315 2d578b823eaf023d12dcc6a5fe5605c0 217 SUPERFAMILY SSF52833 4 84 2.44E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS17315 2d578b823eaf023d12dcc6a5fe5605c0 217 SUPERFAMILY SSF47616 83 198 5.71E-12 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS10770 c06d4ef9fda9dc0b5a270378dfdca08b 61 Pfam PF01679 Proteolipid membrane potential modulator 8 55 3.2E-18 T 11-11-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 S40542_RS20205 f529a597eade2868ee4e57f5e5822b77 766 Pfam PF01804 Penicillin amidase 50 753 3.7E-128 T 11-11-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 S40542_RS20205 f529a597eade2868ee4e57f5e5822b77 766 Gene3D G3DSA:1.10.439.10 45 181 1.6E-37 T 11-11-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 S40542_RS20205 f529a597eade2868ee4e57f5e5822b77 766 SUPERFAMILY SSF56235 45 756 2.34E-171 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS20205 f529a597eade2868ee4e57f5e5822b77 766 PIRSF PIRSF001227 7 762 1.9E-132 T 11-11-2016 IPR014395 Penicillin acylase GO:0016811 S40542_RS20205 f529a597eade2868ee4e57f5e5822b77 766 Gene3D G3DSA:3.60.20.10 252 335 2.7E-73 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS20205 f529a597eade2868ee4e57f5e5822b77 766 Gene3D G3DSA:3.60.20.10 392 599 2.7E-73 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS17925 d9e4312c187c03b2d40ab1aa0321dd94 317 SUPERFAMILY SSF53474 26 287 1.09E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17925 d9e4312c187c03b2d40ab1aa0321dd94 317 Gene3D G3DSA:3.40.50.1820 14 287 4.2E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17925 d9e4312c187c03b2d40ab1aa0321dd94 317 Pfam PF12146 Serine aminopeptidase, S33 44 293 1.0E-36 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF52172 1090 1221 1.85E-35 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SMART SM00448 1097 1209 3.9E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Gene3D G3DSA:3.40.50.2300 1094 1221 2.6E-37 T 11-11-2016 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF47384 820 895 1.67E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF101898 53 241 4.19E-10 T 11-11-2016 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SMART SM00387 940 1053 8.2E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 943 1051 4.6E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Gene3D G3DSA:1.10.287.130 825 891 4.5E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SMART SM00388 831 896 1.5E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SMART SM00342 1263 1345 7.7E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF63829 171 324 1.5E-13 T 11-11-2016 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF63829 366 452 1.5E-13 T 11-11-2016 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 832 895 1.0E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1013 1031 7.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 977 991 7.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1037 1050 7.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Pfam PF07495 Y_Y_Y domain 702 753 1.4E-9 T 11-11-2016 IPR011123 Two component regulator three Y S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Gene3D G3DSA:1.10.10.60 1309 1349 1.5E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF46689 1308 1347 2.42E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Pfam PF07494 Two component regulator propeller 169 185 0.011 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Pfam PF07494 Two component regulator propeller 258 280 0.0018 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Pfam PF07494 Two component regulator propeller 210 233 6.9E-4 T 11-11-2016 IPR011110 Two component regulator propeller S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Gene3D G3DSA:3.30.565.10 904 1052 6.2E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF63829 370 405 1.48E-11 T 11-11-2016 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF63829 444 628 1.48E-11 T 11-11-2016 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Gene3D G3DSA:2.120.10.30 368 537 1.8E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Gene3D G3DSA:2.120.10.30 538 636 2.0E-5 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Gene3D G3DSA:2.120.10.30 177 366 3.4E-9 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Pfam PF12833 Helix-turn-helix domain 1270 1346 2.9E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Pfam PF00072 Response regulator receiver domain 1099 1209 2.5E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 SUPERFAMILY SSF55874 885 1051 1.96E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06780 9ee1f2d350b1a2a92b3f5a481ccd5fe4 1351 Gene3D G3DSA:1.10.10.60 1247 1300 8.0E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 559 721 8.0E-46 T 11-11-2016 IPR000160 GGDEF domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Gene3D G3DSA:3.30.70.270 563 730 4.5E-58 T 11-11-2016 S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Pfam PF02743 Cache domain 114 329 5.4E-12 T 11-11-2016 IPR033479 Double Cache domain 1 S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 SUPERFAMILY SSF158472 370 420 7.19E-6 T 11-11-2016 S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 SUPERFAMILY SSF55785 432 549 6.28E-15 T 11-11-2016 IPR000014 PAS domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Pfam PF00672 HAMP domain 352 417 1.5E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Gene3D G3DSA:3.20.20.450 736 979 6.9E-100 T 11-11-2016 IPR001633 EAL domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 SUPERFAMILY SSF141868 738 980 9.94E-92 T 11-11-2016 IPR001633 EAL domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 SMART SM00052 733 978 3.0E-124 T 11-11-2016 IPR001633 EAL domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Gene3D G3DSA:3.30.450.20 434 549 1.0E-15 T 11-11-2016 S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 SMART SM00267 551 723 1.3E-61 T 11-11-2016 IPR000160 GGDEF domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 SUPERFAMILY SSF55073 567 725 2.51E-51 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 SMART SM00304 369 421 1.9E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Pfam PF00563 EAL domain 739 973 2.7E-76 T 11-11-2016 IPR001633 EAL domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Gene3D G3DSA:3.30.450.20 207 344 2.4E-5 T 11-11-2016 S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 439 557 5.0E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Pfam PF00990 Diguanylate cyclase, GGDEF domain 562 719 2.6E-49 T 11-11-2016 IPR000160 GGDEF domain S40542_RS15780 cc4e7f0170c8de9b06418e1f03872db0 992 Pfam PF13426 PAS domain 449 549 3.0E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS08620 9f4bff49c905a0cdfce45033fc872ddd 218 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 207 1.1E-96 T 11-11-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 S40542_RS08620 9f4bff49c905a0cdfce45033fc872ddd 218 Gene3D G3DSA:3.30.420.10 10 208 3.6E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS08620 9f4bff49c905a0cdfce45033fc872ddd 218 Hamap MF_00157 Ribonuclease T [rnt]. 1 218 109.392 T 11-11-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 S40542_RS08620 9f4bff49c905a0cdfce45033fc872ddd 218 Pfam PF00929 Exonuclease 19 193 8.5E-38 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS08620 9f4bff49c905a0cdfce45033fc872ddd 218 SUPERFAMILY SSF53098 10 206 8.1E-56 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS08620 9f4bff49c905a0cdfce45033fc872ddd 218 SMART SM00479 17 202 1.3E-30 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS07875 7e9fb559a749839ae96ddb345bf6961c 201 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 195 6.3E-13 T 11-11-2016 S40542_RS07875 7e9fb559a749839ae96ddb345bf6961c 201 Gene3D G3DSA:1.10.10.60 4 41 1.7E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07875 7e9fb559a749839ae96ddb345bf6961c 201 Gene3D G3DSA:1.10.357.10 63 198 1.1E-31 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS07875 7e9fb559a749839ae96ddb345bf6961c 201 SUPERFAMILY SSF46689 4 82 3.64E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07875 7e9fb559a749839ae96ddb345bf6961c 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.0E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS07875 7e9fb559a749839ae96ddb345bf6961c 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.0E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS07875 7e9fb559a749839ae96ddb345bf6961c 201 Gene3D G3DSA:1.10.10.60 42 62 1.3E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07875 7e9fb559a749839ae96ddb345bf6961c 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 3.2E-16 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS04635 61840153f77bbe66be301363fbdf798c 185 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 181 3.4E-50 T 11-11-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA S40542_RS04635 61840153f77bbe66be301363fbdf798c 185 SUPERFAMILY SSF53474 5 182 1.85E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS04635 61840153f77bbe66be301363fbdf798c 185 Gene3D G3DSA:3.40.50.1820 5 178 9.6E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS05140 512f490c29fddc2034d2960b5fbb743e 300 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 180 196 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 S40542_RS05140 512f490c29fddc2034d2960b5fbb743e 300 Gene3D G3DSA:3.30.160.20 163 241 1.8E-37 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain S40542_RS05140 512f490c29fddc2034d2960b5fbb743e 300 Pfam PF03462 PCRF domain 2 154 1.5E-47 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 S40542_RS05140 512f490c29fddc2034d2960b5fbb743e 300 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 298 7.8E-150 T 11-11-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 S40542_RS05140 512f490c29fddc2034d2960b5fbb743e 300 SMART SM00937 20 130 1.1E-54 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 S40542_RS05140 512f490c29fddc2034d2960b5fbb743e 300 SUPERFAMILY SSF75620 2 299 2.62E-121 T 11-11-2016 S40542_RS05140 512f490c29fddc2034d2960b5fbb743e 300 Pfam PF00472 RF-1 domain 164 272 6.3E-39 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 S40542_RS05140 512f490c29fddc2034d2960b5fbb743e 300 Gene3D G3DSA:1.20.58.410 1 51 1.7E-8 T 11-11-2016 S40542_RS15510 0170d9ed5956ea88ba2a51ed7e65766c 432 Pfam PF09375 Imelysin 80 397 1.9E-29 T 11-11-2016 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 SMART SM00387 238 353 3.6E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 Gene3D G3DSA:3.30.565.10 200 351 1.5E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 66 5.2E-6 T 11-11-2016 IPR000014 PAS domain S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 SMART SM00091 7 72 3.3E-6 T 11-11-2016 IPR000014 PAS domain S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 Gene3D G3DSA:1.10.287.130 131 191 2.1E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 350 2.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 2.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 332 2.4E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 SMART SM00388 134 199 4.1E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 SUPERFAMILY SSF55874 202 350 7.86E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 Pfam PF00512 His Kinase A (phospho-acceptor) domain 136 191 2.0E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 Gene3D G3DSA:3.30.450.20 11 114 2.7E-13 T 11-11-2016 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 Pfam PF00989 PAS fold 12 103 1.5E-6 T 11-11-2016 IPR013767 PAS fold GO:0006355 S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 239 352 4.6E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 SUPERFAMILY SSF55785 12 105 4.47E-7 T 11-11-2016 IPR000014 PAS domain S40542_RS01075 3d73aa950a8afdf18cdb5e5c310c304d 354 SUPERFAMILY SSF47384 129 191 5.1E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 1.7E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 454 6.5E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 294 3.3E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 SMART SM00387 342 458 1.2E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 SMART SM00448 475 589 5.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 Gene3D G3DSA:3.40.50.2300 473 592 3.8E-28 T 11-11-2016 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 SUPERFAMILY SSF55874 285 452 2.1E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 Gene3D G3DSA:3.30.565.10 299 454 1.8E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 SUPERFAMILY SSF52172 473 593 2.13E-26 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 Gene3D G3DSA:1.10.287.130 222 290 4.7E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 Pfam PF00072 Response regulator receiver domain 477 589 1.9E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 SMART SM00388 230 295 5.6E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 Gene3D G3DSA:1.20.120.160 608 712 1.1E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 S40542_RS00585 6bcf64984be73ce4f189aca7ec9644ea 719 SUPERFAMILY SSF47384 216 294 2.94E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03940 e6019384b315253c7d89ed912e0c209a 204 SUPERFAMILY SSF50475 1 199 5.89E-32 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS03940 e6019384b315253c7d89ed912e0c209a 204 Pfam PF01613 Flavin reductase like domain 22 163 2.6E-14 T 11-11-2016 IPR002563 Flavin reductase like domain GO:0010181 S40542_RS03940 e6019384b315253c7d89ed912e0c209a 204 Gene3D G3DSA:2.30.110.10 11 192 1.9E-49 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS03940 e6019384b315253c7d89ed912e0c209a 204 SMART SM00903 19 173 0.0012 T 11-11-2016 IPR002563 Flavin reductase like domain GO:0010181 S40542_RS07215 2aa865f1e74664ffd84256f3ab825099 333 Gene3D G3DSA:3.40.630.30 180 308 2.3E-5 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS07215 2aa865f1e74664ffd84256f3ab825099 333 SUPERFAMILY SSF55729 177 308 3.67E-7 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15425 76e9d4b0a4c9da02e0eda0746c90c101 281 Gene3D G3DSA:3.20.20.20 14 276 4.2E-104 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS15425 76e9d4b0a4c9da02e0eda0746c90c101 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 274 2.0E-97 T 11-11-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 S40542_RS15425 76e9d4b0a4c9da02e0eda0746c90c101 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 19 34 - T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS15425 76e9d4b0a4c9da02e0eda0746c90c101 281 SUPERFAMILY SSF51717 9 275 1.96E-97 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS15425 76e9d4b0a4c9da02e0eda0746c90c101 281 Pfam PF00809 Pterin binding enzyme 20 260 1.9E-79 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS15425 76e9d4b0a4c9da02e0eda0746c90c101 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 53 66 - T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS13105 8f520506bbf627763e35c85a98a35f15 159 Pfam PF06718 Protein of unknown function (DUF1203) 36 157 1.3E-30 T 11-11-2016 IPR009593 Protein of unknown function DUF1203 S40542_RS13105 8f520506bbf627763e35c85a98a35f15 159 PIRSF PIRSF034110 1 158 8.9E-32 T 11-11-2016 IPR009593 Protein of unknown function DUF1203 S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 415 9.4E-211 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 SUPERFAMILY SSF57716 15 50 3.85E-12 T 11-11-2016 S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 320 398 2.2E-16 T 11-11-2016 IPR019489 Clp ATPase, C-terminal S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 SMART SM01086 320 415 5.0E-35 T 11-11-2016 IPR019489 Clp ATPase, C-terminal S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 6 418 53.647 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 313 1.3E-49 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 SMART SM00994 14 53 7.4E-25 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 SMART SM00382 114 336 2.9E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 Pfam PF06689 ClpX C4-type zinc finger 15 52 2.3E-21 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 Gene3D G3DSA:3.40.50.300 297 314 1.4E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 Gene3D G3DSA:3.40.50.300 69 256 1.4E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 SUPERFAMILY SSF52540 64 406 5.83E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16885 a70133cb17b02597d53cd8071413ad01 427 Gene3D G3DSA:1.10.8.60 319 420 1.0E-38 T 11-11-2016 S40542_RS08970 c72a08561ece9ee02af1e5196c85d199 517 Pfam PF03806 AbgT putative transporter family 16 514 1.2E-199 T 11-11-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 S40542_RS04575 4a99894100796d3398d2c3d9e0f01cbc 185 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 2 185 39.525 T 11-11-2016 IPR003774 Protein of unknown function UPF0301 S40542_RS04575 4a99894100796d3398d2c3d9e0f01cbc 185 Gene3D G3DSA:3.40.1740.10 2 41 3.3E-37 T 11-11-2016 S40542_RS04575 4a99894100796d3398d2c3d9e0f01cbc 185 Gene3D G3DSA:3.40.1740.10 129 176 3.3E-37 T 11-11-2016 S40542_RS04575 4a99894100796d3398d2c3d9e0f01cbc 185 Pfam PF02622 Uncharacterized ACR, COG1678 13 172 4.2E-52 T 11-11-2016 IPR003774 Protein of unknown function UPF0301 S40542_RS04575 4a99894100796d3398d2c3d9e0f01cbc 185 Gene3D G3DSA:3.30.70.1300 42 128 1.8E-26 T 11-11-2016 S40542_RS04575 4a99894100796d3398d2c3d9e0f01cbc 185 SUPERFAMILY SSF143456 2 185 1.96E-67 T 11-11-2016 S40542_RS13990 5ffeec7322e0f2ea1fa2fd36002a996a 454 Gene3D G3DSA:3.40.710.10 37 351 6.8E-74 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS13990 5ffeec7322e0f2ea1fa2fd36002a996a 454 SUPERFAMILY SSF56601 25 347 7.62E-76 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS13990 5ffeec7322e0f2ea1fa2fd36002a996a 454 Pfam PF00144 Beta-lactamase 27 343 9.5E-57 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS04445 334170efdbdaff8ede8130d877d5b5e9 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 225 1.8E-67 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 S40542_RS04445 334170efdbdaff8ede8130d877d5b5e9 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 222 9.4E-68 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 S40542_RS04445 334170efdbdaff8ede8130d877d5b5e9 231 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 11-11-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 S40542_RS04445 334170efdbdaff8ede8130d877d5b5e9 231 SUPERFAMILY SSF53448 7 224 1.11E-60 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS04445 334170efdbdaff8ede8130d877d5b5e9 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 227 29.922 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 S40542_RS04445 334170efdbdaff8ede8130d877d5b5e9 231 Gene3D G3DSA:3.90.550.10 7 228 5.8E-69 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS19035 dd4aabf0ff3da1c2e00ac5d0444bce84 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.9E-34 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 S40542_RS19035 dd4aabf0ff3da1c2e00ac5d0444bce84 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 1.9E-28 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 S40542_RS19035 dd4aabf0ff3da1c2e00ac5d0444bce84 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-37 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 S40542_RS19035 dd4aabf0ff3da1c2e00ac5d0444bce84 95 SUPERFAMILY SSF69754 1 95 4.05E-36 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 SUPERFAMILY SSF48179 202 294 4.93E-24 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 292 2.7E-24 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 PIRSF PIRSF000124 8 424 8.6E-53 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 SUPERFAMILY SSF52413 305 419 1.18E-25 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 9 413 3.1E-117 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 Gene3D G3DSA:3.40.50.720 6 224 2.2E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 419 1.1E-19 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 SUPERFAMILY SSF51735 9 193 5.85E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 Gene3D G3DSA:3.40.50.720 234 421 2.1E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 SMART SM00984 319 419 3.9E-30 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 181 2.3E-33 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18575 e8db9dffe8e1eba46cb4718246360d2b 426 PIRSF PIRSF500136 2 426 7.1E-148 T 11-11-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 S40542_RS06630 f713627ad184eef9c37ae6a8d62e9a17 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.133 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 S40542_RS06630 f713627ad184eef9c37ae6a8d62e9a17 185 Gene3D G3DSA:1.10.132.20 67 185 9.9E-44 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 S40542_RS06630 f713627ad184eef9c37ae6a8d62e9a17 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 3.2E-74 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 S40542_RS06630 f713627ad184eef9c37ae6a8d62e9a17 185 SUPERFAMILY SSF55194 2 184 9.81E-71 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 S40542_RS06630 f713627ad184eef9c37ae6a8d62e9a17 185 Pfam PF01765 Ribosome recycling factor 21 183 3.6E-62 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Pfam PF01588 Putative tRNA binding domain 579 671 1.1E-24 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Pfam PF08264 Anticodon-binding domain of tRNA 411 500 1.7E-6 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Pfam PF09334 tRNA synthetases class I (M) 6 393 1.1E-157 T 11-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Gene3D G3DSA:1.10.730.10 377 531 3.1E-42 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 SUPERFAMILY SSF52374 3 139 4.22E-102 T 11-11-2016 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 SUPERFAMILY SSF52374 174 384 4.22E-102 T 11-11-2016 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Gene3D G3DSA:2.20.28.20 143 174 4.7E-16 T 11-11-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Gene3D G3DSA:3.40.50.620 181 376 5.2E-86 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Gene3D G3DSA:3.40.50.620 3 142 5.2E-86 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 555 673 5.7E-44 T 11-11-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 SUPERFAMILY SSF47323 387 544 9.35E-44 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Gene3D G3DSA:2.40.50.140 566 673 2.4E-42 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 SUPERFAMILY SSF57770 140 174 2.88E-11 T 11-11-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 542 40.576 T 11-11-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 531 8.7E-186 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 SUPERFAMILY SSF50249 569 673 4.9E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 8.0E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 8.0E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 PRINTS PR01041 Methionyl-tRNA synthetase signature 381 392 8.0E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 PRINTS PR01041 Methionyl-tRNA synthetase signature 288 303 8.0E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 8.0E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 S40542_RS12190 d32999d2dbaf0c8f2836d71c735458cb 674 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 8.0E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 S40542_RS15440 ebe8e3887522b358d1148e2557b24cd8 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.1E-19 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 S40542_RS15440 ebe8e3887522b358d1148e2557b24cd8 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 95 8.3E-35 T 11-11-2016 IPR017924 RNA-binding protein YhbY GO:0003723 S40542_RS15440 ebe8e3887522b358d1148e2557b24cd8 98 SUPERFAMILY SSF75471 1 96 2.35E-30 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 S40542_RS15440 ebe8e3887522b358d1148e2557b24cd8 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 4.0E-35 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 S40542_RS15440 ebe8e3887522b358d1148e2557b24cd8 98 SMART SM01103 3 86 5.9E-40 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 S40542_RS15440 ebe8e3887522b358d1148e2557b24cd8 98 Gene3D G3DSA:3.30.110.60 1 96 1.1E-31 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 S40542_RS06385 a79bdde3237507d97d8e2279712bd71a 447 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 153 364 3.0E-73 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS06385 a79bdde3237507d97d8e2279712bd71a 447 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 19 444 5.6E-181 T 11-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS06385 a79bdde3237507d97d8e2279712bd71a 447 SUPERFAMILY SSF52540 100 370 8.55E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06385 a79bdde3237507d97d8e2279712bd71a 447 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 443 7.4E-199 T 11-11-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS06385 a79bdde3237507d97d8e2279712bd71a 447 Gene3D G3DSA:3.40.50.300 126 412 3.9E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06385 a79bdde3237507d97d8e2279712bd71a 447 SMART SM00382 165 348 8.0E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS06385 a79bdde3237507d97d8e2279712bd71a 447 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 13 685 7.6E-249 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 SUPERFAMILY SSF56024 323 502 4.71E-53 T 11-11-2016 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 Hamap MF_00347 Polyphosphate kinase [ppk]. 10 689 30.261 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 SUPERFAMILY SSF56024 508 690 5.61E-70 T 11-11-2016 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 Gene3D G3DSA:3.30.870.10 323 507 2.2E-70 T 11-11-2016 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 SUPERFAMILY SSF140356 13 111 4.19E-30 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 Gene3D G3DSA:3.30.1840.10 113 308 6.2E-48 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 Pfam PF02503 Polyphosphate kinase middle domain 126 328 2.0E-40 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 Pfam PF13090 Polyphosphate kinase C-terminal domain 339 684 2.0E-145 T 11-11-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 PIRSF PIRSF015589 2 695 7.3E-244 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 Gene3D G3DSA:3.30.870.10 508 690 2.6E-71 T 11-11-2016 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 SUPERFAMILY SSF143724 114 321 7.26E-56 T 11-11-2016 S40542_RS18210 ec4049ae1842eb669e3ed8227c6874dd 695 Pfam PF13089 Polyphosphate kinase N-terminal domain 13 116 5.3E-31 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 S40542_RS19100 f6378d23efac1294aabd95426e0b2fdc 280 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 6.2E-71 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 S40542_RS19100 f6378d23efac1294aabd95426e0b2fdc 280 Pfam PF04085 rod shape-determining protein MreC 123 269 1.5E-34 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 S40542_RS19100 f6378d23efac1294aabd95426e0b2fdc 280 PIRSF PIRSF038471 2 280 1.2E-68 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 S40542_RS12185 9aaaa490ddb3eb7f3e9e3d230d6fb6bf 357 SUPERFAMILY SSF52540 87 320 1.09E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12185 9aaaa490ddb3eb7f3e9e3d230d6fb6bf 357 ProSitePatterns PS01215 Mrp family signature. 202 218 - T 11-11-2016 IPR000808 Mrp, conserved site GO:0005524 S40542_RS12185 9aaaa490ddb3eb7f3e9e3d230d6fb6bf 357 Gene3D G3DSA:3.40.50.300 89 322 5.2E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12185 9aaaa490ddb3eb7f3e9e3d230d6fb6bf 357 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 322 1.8E-97 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein S40542_RS12185 9aaaa490ddb3eb7f3e9e3d230d6fb6bf 357 Hamap MF_02040 Iron-sulfur cluster carrier protein. 90 330 36.651 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein S40542_RS05425 1ff0787d79864d80f313c1373ff9dcac 279 Gene3D G3DSA:1.10.3150.10 13 276 2.1E-54 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS05425 1ff0787d79864d80f313c1373ff9dcac 279 Pfam PF08668 HDOD domain 22 211 2.0E-35 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS05425 1ff0787d79864d80f313c1373ff9dcac 279 SUPERFAMILY SSF109604 12 234 3.06E-47 T 11-11-2016 S40542_RS01385 12257a626507ed77eb8c510950e52abd 487 SUPERFAMILY SSF110997 401 464 5.23E-5 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS01385 12257a626507ed77eb8c510950e52abd 487 Pfam PF05036 Sporulation related domain 401 465 3.9E-7 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS01385 12257a626507ed77eb8c510950e52abd 487 Gene3D G3DSA:3.40.50.300 27 149 3.4E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01385 12257a626507ed77eb8c510950e52abd 487 SUPERFAMILY SSF52540 10 197 7.72E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01385 12257a626507ed77eb8c510950e52abd 487 Gene3D G3DSA:3.30.70.1070 400 464 4.9E-5 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS01720 b1ddb3aec3a0c215864d8cec75c60750 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS01720 b1ddb3aec3a0c215864d8cec75c60750 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.2E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS01720 b1ddb3aec3a0c215864d8cec75c60750 147 Pfam PF13633 Prokaryotic N-terminal methylation site 4 29 2.8E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS05730 8952f68fb8811b1c6789e12af26bc36e 268 Gene3D G3DSA:3.40.50.150 8 197 5.6E-71 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS05730 8952f68fb8811b1c6789e12af26bc36e 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.389 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 S40542_RS05730 8952f68fb8811b1c6789e12af26bc36e 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 262 1.5E-86 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 S40542_RS05730 8952f68fb8811b1c6789e12af26bc36e 268 Gene3D G3DSA:1.10.8.100 203 265 9.6E-23 T 11-11-2016 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 S40542_RS05730 8952f68fb8811b1c6789e12af26bc36e 268 SUPERFAMILY SSF53335 8 265 4.65E-77 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS05730 8952f68fb8811b1c6789e12af26bc36e 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 263 5.5E-75 T 11-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm S40542_RS05730 8952f68fb8811b1c6789e12af26bc36e 268 SMART SM00650 25 197 9.7E-84 T 11-11-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 S40542_RS05730 8952f68fb8811b1c6789e12af26bc36e 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 11-11-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 S40542_RS14170 ebf209797070ae7e96151157fb797afd 195 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 10 183 1.3E-33 T 11-11-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 S40542_RS14170 ebf209797070ae7e96151157fb797afd 195 Gene3D G3DSA:1.10.10.10 88 164 3.2E-35 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14170 ebf209797070ae7e96151157fb797afd 195 SUPERFAMILY SSF46785 89 164 2.95E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14170 ebf209797070ae7e96151157fb797afd 195 Gene3D G3DSA:1.10.10.10 6 86 2.1E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14170 ebf209797070ae7e96151157fb797afd 195 PIRSF PIRSF019345 1 193 1.6E-57 T 11-11-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 S40542_RS14170 ebf209797070ae7e96151157fb797afd 195 SUPERFAMILY SSF46785 6 86 8.16E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14170 ebf209797070ae7e96151157fb797afd 195 Pfam PF04079 Segregation and condensation complex subunit ScpB 13 173 2.3E-49 T 11-11-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 Gene3D G3DSA:1.10.10.10 1 79 1.2E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.9E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 Pfam PF03466 LysR substrate binding domain 93 287 1.5E-33 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 SUPERFAMILY SSF46785 3 80 1.8E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 Gene3D G3DSA:3.40.190.10 177 269 6.6E-20 T 11-11-2016 S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 Gene3D G3DSA:3.40.190.10 94 176 2.7E-21 T 11-11-2016 S40542_RS13610 5cfa41d12363f9cf26c57ede0b88273f 306 SUPERFAMILY SSF53850 92 298 1.9E-32 T 11-11-2016 S40542_RS09530 20c0745f4ffc9abc59e0eb07fc160ef1 523 SUPERFAMILY SSF48173 232 507 4.58E-59 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 S40542_RS09530 20c0745f4ffc9abc59e0eb07fc160ef1 523 Gene3D G3DSA:1.10.579.10 326 457 1.6E-5 T 11-11-2016 S40542_RS09530 20c0745f4ffc9abc59e0eb07fc160ef1 523 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 9 227 6.8E-66 T 11-11-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein S40542_RS09530 20c0745f4ffc9abc59e0eb07fc160ef1 523 Gene3D G3DSA:1.25.40.80 230 325 4.0E-9 T 11-11-2016 S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 Gene3D G3DSA:3.30.70.270 317 480 4.6E-54 T 11-11-2016 S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 Pfam PF08447 PAS fold 116 179 5.3E-10 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SUPERFAMILY SSF141868 486 733 1.15E-83 T 11-11-2016 IPR001633 EAL domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 Pfam PF13426 PAS domain 204 303 1.5E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SMART SM00091 71 135 63.0 T 11-11-2016 IPR000014 PAS domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SMART SM00091 193 256 0.21 T 11-11-2016 IPR000014 PAS domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 312 471 4.3E-40 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 Gene3D G3DSA:3.30.450.20 204 304 3.4E-15 T 11-11-2016 S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SUPERFAMILY SSF55785 200 304 4.71E-15 T 11-11-2016 IPR000014 PAS domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 189 311 1.0E-14 T 11-11-2016 IPR000014 PAS domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SUPERFAMILY SSF55785 78 186 5.41E-7 T 11-11-2016 IPR000014 PAS domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SMART SM00086 262 304 3.4E-4 T 11-11-2016 IPR001610 PAC motif S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SMART SM00086 142 185 100.0 T 11-11-2016 IPR001610 PAC motif S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 Gene3D G3DSA:3.20.20.450 484 733 3.2E-91 T 11-11-2016 IPR001633 EAL domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 Gene3D G3DSA:3.30.450.20 61 193 1.2E-18 T 11-11-2016 S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SUPERFAMILY SSF55073 321 471 4.0E-45 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 Pfam PF00990 Diguanylate cyclase, GGDEF domain 316 466 2.0E-45 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 Pfam PF00563 EAL domain 492 721 1.2E-67 T 11-11-2016 IPR001633 EAL domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SMART SM00267 304 471 8.8E-56 T 11-11-2016 IPR000160 GGDEF domain S40542_RS05795 73968dbfbeccb76b2551de4a49d90a21 745 SMART SM00052 481 726 1.2E-106 T 11-11-2016 IPR001633 EAL domain S40542_RS06290 a858ca40bcebf28851604861074519a7 316 SUPERFAMILY SSF51735 4 294 8.73E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06290 a858ca40bcebf28851604861074519a7 316 Gene3D G3DSA:3.40.50.720 4 283 2.0E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06290 a858ca40bcebf28851604861074519a7 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 232 7.1E-35 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 Gene3D G3DSA:3.40.190.10 106 193 1.7E-29 T 11-11-2016 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 PIRSF PIRSF001500 1 378 1.6E-121 T 11-11-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 SUPERFAMILY SSF53850 105 289 2.82E-49 T 11-11-2016 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 Gene3D G3DSA:3.40.190.10 194 271 1.2E-21 T 11-11-2016 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 Gene3D G3DSA:1.20.59.10 3 105 4.0E-36 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 1.5E-23 T 11-11-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 323 330 - T 11-11-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 SMART SM00830 10 90 2.9E-24 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 SUPERFAMILY SSF55021 278 375 1.17E-25 T 11-11-2016 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 SUPERFAMILY SSF48600 5 92 1.83E-20 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 Pfam PF00800 Prephenate dehydratase 106 285 7.1E-52 T 11-11-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 Pfam PF01817 Chorismate mutase type II 10 88 2.2E-16 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 S40542_RS15785 8fcbe657efbfc34537d30a7aca999057 384 Gene3D G3DSA:3.30.70.260 293 375 1.5E-29 T 11-11-2016 S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 Gene3D G3DSA:1.10.10.10 6 87 2.6E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 SUPERFAMILY SSF53850 89 294 3.59E-34 T 11-11-2016 S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 Gene3D G3DSA:3.40.190.10 89 181 4.4E-16 T 11-11-2016 S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 Pfam PF03466 LysR substrate binding domain 89 290 3.3E-30 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 Gene3D G3DSA:3.40.190.10 182 260 6.0E-13 T 11-11-2016 S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 SUPERFAMILY SSF46785 6 111 4.54E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14850 4b70ebc297b28be6a5ae63809493b8b0 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 8.4E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 SUPERFAMILY SSF56784 1 212 2.23E-48 T 11-11-2016 IPR023214 HAD-like domain S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 185 8.4E-30 T 11-11-2016 IPR023214 HAD-like domain S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 1.3E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 1.3E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.3E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.3E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 Gene3D G3DSA:1.10.150.240 16 83 1.2E-21 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 Gene3D G3DSA:3.40.50.1000 89 213 2.9E-39 T 11-11-2016 IPR023214 HAD-like domain S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 Gene3D G3DSA:3.40.50.1000 1 15 2.9E-39 T 11-11-2016 IPR023214 HAD-like domain S40542_RS12510 af165ec19d1706d624fc9e25bbec6255 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 185 1.9E-11 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS14320 6a90152253b11a7a07269af544a0f3b8 375 SUPERFAMILY SSF53187 105 372 7.94E-60 T 11-11-2016 S40542_RS14320 6a90152253b11a7a07269af544a0f3b8 375 Gene3D G3DSA:3.40.630.10 101 371 2.0E-41 T 11-11-2016 S40542_RS14320 6a90152253b11a7a07269af544a0f3b8 375 Pfam PF00246 Zinc carboxypeptidase 125 340 3.0E-24 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS14320 6a90152253b11a7a07269af544a0f3b8 375 SMART SM00631 112 326 2.3E-5 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS01540 36885c9136cda6b26c798c024b026b2d 210 PIRSF PIRSF000005 1 210 1.6E-64 T 11-11-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 S40542_RS01540 36885c9136cda6b26c798c024b026b2d 210 SUPERFAMILY SSF46626 120 208 7.39E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01540 36885c9136cda6b26c798c024b026b2d 210 SUPERFAMILY SSF46626 20 109 3.58E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01540 36885c9136cda6b26c798c024b026b2d 210 Pfam PF00034 Cytochrome c 28 108 2.6E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01540 36885c9136cda6b26c798c024b026b2d 210 Pfam PF00034 Cytochrome c 121 207 2.5E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01540 36885c9136cda6b26c798c024b026b2d 210 Gene3D G3DSA:1.10.760.10 25 110 9.4E-29 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01540 36885c9136cda6b26c798c024b026b2d 210 Gene3D G3DSA:1.10.760.10 125 208 1.3E-28 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS18650 09d77ec53e2e2db664b3b43ffe33cc43 350 Pfam PF00953 Glycosyl transferase family 4 71 231 7.0E-33 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 S40542_RS18650 09d77ec53e2e2db664b3b43ffe33cc43 350 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 7 346 5.7E-115 T 11-11-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 S40542_RS18650 09d77ec53e2e2db664b3b43ffe33cc43 350 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 6 349 26.15 T 11-11-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530 S40542_RS08870 2dcb5811b96d9c594e0a98dd82aa34ed 373 SUPERFAMILY SSF111331 75 139 2.11E-7 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain S40542_RS08870 2dcb5811b96d9c594e0a98dd82aa34ed 373 Pfam PF01513 ATP-NAD kinase 4 364 7.1E-51 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 S40542_RS08870 2dcb5811b96d9c594e0a98dd82aa34ed 373 PIRSF PIRSF016907 1 371 1.3E-139 T 11-11-2016 IPR011386 Putative ATP-NAD kinase S40542_RS08870 2dcb5811b96d9c594e0a98dd82aa34ed 373 Gene3D G3DSA:3.40.50.10330 71 165 2.2E-6 T 11-11-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 S40542_RS12130 94841aa7a7e291e050ee941ee711f5a3 126 Pfam PF13840 ACT domain 59 120 1.1E-21 T 11-11-2016 IPR027795 GATS-like ACT domain S40542_RS12130 94841aa7a7e291e050ee941ee711f5a3 126 SUPERFAMILY SSF55021 1 57 1.76E-15 T 11-11-2016 S40542_RS12130 94841aa7a7e291e050ee941ee711f5a3 126 SUPERFAMILY SSF55021 62 125 1.59E-19 T 11-11-2016 S40542_RS12130 94841aa7a7e291e050ee941ee711f5a3 126 Gene3D G3DSA:3.30.2130.10 3 120 6.1E-20 T 11-11-2016 S40542_RS12130 94841aa7a7e291e050ee941ee711f5a3 126 PIRSF PIRSF008459 2 126 4.4E-41 T 11-11-2016 IPR016540 Uncharacterised conserved protein UCP008459 S40542_RS03670 ad7acc44641172ed321f249ba234d6e8 381 Gene3D G3DSA:2.70.70.10 245 379 7.9E-38 T 11-11-2016 S40542_RS03670 ad7acc44641172ed321f249ba234d6e8 381 Pfam PF01551 Peptidase family M23 281 374 1.9E-25 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS03670 ad7acc44641172ed321f249ba234d6e8 381 SUPERFAMILY SSF51261 161 378 2.09E-45 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS06660 cc13ebe73eba9d444b01261d7f2982f9 172 Gene3D G3DSA:3.30.910.20 16 62 1.1E-23 T 11-11-2016 S40542_RS06660 cc13ebe73eba9d444b01261d7f2982f9 172 Gene3D G3DSA:3.30.910.20 100 169 1.1E-23 T 11-11-2016 S40542_RS06660 cc13ebe73eba9d444b01261d7f2982f9 172 SUPERFAMILY SSF111384 25 169 6.15E-24 T 11-11-2016 IPR024930 Skp domain S40542_RS06660 cc13ebe73eba9d444b01261d7f2982f9 172 SMART SM00935 14 170 2.4E-34 T 11-11-2016 IPR005632 Chaperone protein Skp GO:0051082 S40542_RS06660 cc13ebe73eba9d444b01261d7f2982f9 172 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 5.3E-25 T 11-11-2016 IPR005632 Chaperone protein Skp GO:0051082 S40542_RS15645 f1dab29c25fac6c49bf9232b342cc080 83 SUPERFAMILY SSF109910 4 79 1.44E-25 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase S40542_RS15645 f1dab29c25fac6c49bf9232b342cc080 83 Pfam PF03937 Flavinator of succinate dehydrogenase 9 76 8.6E-26 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase S40542_RS15645 f1dab29c25fac6c49bf9232b342cc080 83 Gene3D G3DSA:1.10.150.250 8 82 8.6E-29 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase S40542_RS11595 3e43654c57e89d9711b34a3a8b1d521c 455 Gene3D G3DSA:2.50.20.10 160 310 7.4E-39 T 11-11-2016 S40542_RS11595 3e43654c57e89d9711b34a3a8b1d521c 455 Gene3D G3DSA:2.50.20.10 343 451 7.4E-39 T 11-11-2016 S40542_RS11595 3e43654c57e89d9711b34a3a8b1d521c 455 Pfam PF07044 Protein of unknown function (DUF1329) 84 450 2.9E-158 T 11-11-2016 IPR010752 Protein of unknown function DUF1329 S40542_RS05750 fcb9269a5f6c4c2a6f9505ca3bb576bd 346 SUPERFAMILY SSF56112 20 319 7.14E-48 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS05750 fcb9269a5f6c4c2a6f9505ca3bb576bd 346 Pfam PF01636 Phosphotransferase enzyme family 38 251 1.7E-22 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase S40542_RS05750 fcb9269a5f6c4c2a6f9505ca3bb576bd 346 Gene3D G3DSA:3.90.1200.10 106 342 1.3E-44 T 11-11-2016 S40542_RS05750 fcb9269a5f6c4c2a6f9505ca3bb576bd 346 Gene3D G3DSA:3.30.200.20 16 104 6.2E-23 T 11-11-2016 S40542_RS16815 5ce1c8b71efa67ecc390e5f8d35b9754 337 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 69 333 5.8E-53 T 11-11-2016 IPR006507 Uncharacterised protein family UPF0283 S40542_RS16815 5ce1c8b71efa67ecc390e5f8d35b9754 337 Pfam PF05128 Domain of unknown function (DUF697) 176 333 1.4E-44 T 11-11-2016 IPR021147 Protein of unknown function DUF697 S40542_RS02040 7e2ecc0fe307c85cd96df1b3020cf84e 239 Pfam PF00072 Response regulator receiver domain 8 118 8.5E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02040 7e2ecc0fe307c85cd96df1b3020cf84e 239 SUPERFAMILY SSF52172 5 128 8.82E-42 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS02040 7e2ecc0fe307c85cd96df1b3020cf84e 239 SMART SM00862 157 233 1.7E-23 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS02040 7e2ecc0fe307c85cd96df1b3020cf84e 239 Gene3D G3DSA:1.10.10.10 134 236 1.4E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02040 7e2ecc0fe307c85cd96df1b3020cf84e 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 1.6E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS02040 7e2ecc0fe307c85cd96df1b3020cf84e 239 SMART SM00448 6 117 1.2E-43 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02040 7e2ecc0fe307c85cd96df1b3020cf84e 239 SUPERFAMILY SSF46894 134 235 2.1E-25 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS02040 7e2ecc0fe307c85cd96df1b3020cf84e 239 Gene3D G3DSA:3.40.50.2300 6 127 1.6E-42 T 11-11-2016 S40542_RS10870 6d95255ad9b12d3f097402ec163e2cc0 182 SUPERFAMILY SSF55469 1 181 4.71E-33 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 S40542_RS10870 6d95255ad9b12d3f097402ec163e2cc0 182 Pfam PF00881 Nitroreductase family 19 161 1.1E-19 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 S40542_RS10870 6d95255ad9b12d3f097402ec163e2cc0 182 Gene3D G3DSA:3.40.109.10 1 180 8.8E-33 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 S40542_RS10870 6d95255ad9b12d3f097402ec163e2cc0 182 PIRSF PIRSF000232 1 182 2.0E-55 T 11-11-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like S40542_RS18710 5d2eb017cbc2ed5c67eb036c80435848 307 Gene3D G3DSA:3.30.1700.10 129 283 3.5E-60 T 11-11-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS18710 5d2eb017cbc2ed5c67eb036c80435848 307 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 44.399 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS18710 5d2eb017cbc2ed5c67eb036c80435848 307 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.1E-105 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS18710 5d2eb017cbc2ed5c67eb036c80435848 307 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 294 7.1E-125 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS18710 5d2eb017cbc2ed5c67eb036c80435848 307 SUPERFAMILY SSF54211 135 278 1.9E-51 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS18710 5d2eb017cbc2ed5c67eb036c80435848 307 SUPERFAMILY SSF54211 3 124 5.16E-38 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS18710 5d2eb017cbc2ed5c67eb036c80435848 307 Gene3D G3DSA:3.30.230.20 3 125 1.4E-42 T 11-11-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 Gene3D G3DSA:3.40.50.300 148 319 2.6E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 Pfam PF02954 Bacterial regulatory protein, Fis family 413 454 3.7E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 Gene3D G3DSA:1.10.8.60 320 396 1.3E-23 T 11-11-2016 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 SUPERFAMILY SSF46689 361 456 2.11E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 SUPERFAMILY SSF52172 4 193 2.42E-29 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 Gene3D G3DSA:1.10.10.60 411 457 2.2E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 Pfam PF00158 Sigma-54 interaction domain 150 312 9.4E-60 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 SMART SM00448 4 120 8.1E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 Gene3D G3DSA:3.40.50.2300 4 133 1.3E-27 T 11-11-2016 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 SMART SM00382 168 320 7.8E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 2.8E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 2.8E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 Pfam PF00072 Response regulator receiver domain 6 120 2.8E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00355 00b0addd65d66558d11bbeece0aa323c 460 SUPERFAMILY SSF52540 148 388 9.16E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 SUPERFAMILY SSF54373 211 306 4.32E-37 T 11-11-2016 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 Gene3D G3DSA:3.50.50.60 7 282 6.5E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 SUPERFAMILY SSF54862 449 549 1.75E-28 T 11-11-2016 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 445 546 5.5E-50 T 11-11-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 Reactome: R-HSA-611105 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 SUPERFAMILY SSF51905 307 447 1.79E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 SUPERFAMILY SSF51905 3 211 1.79E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 1.2E-6 T 11-11-2016 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 1.2E-6 T 11-11-2016 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 Pfam PF01494 FAD binding domain 9 207 8.0E-8 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 S40542_RS12475 a66f53982c117f1dc66ee311866a700c 549 Gene3D G3DSA:3.30.70.20 492 535 1.2E-4 T 11-11-2016 S40542_RS09235 cba797db640cc301ed85540e83433d8d 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 157 1.5E-5 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 S40542_RS09235 cba797db640cc301ed85540e83433d8d 158 Gene3D G3DSA:3.10.50.30 77 157 5.9E-9 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 S40542_RS09235 cba797db640cc301ed85540e83433d8d 158 SUPERFAMILY SSF54534 80 157 2.62E-8 T 11-11-2016 S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 Gene3D G3DSA:1.10.10.10 5 55 1.7E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 SUPERFAMILY SSF54909 64 153 7.24E-14 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 Pfam PF01037 Lrp/AsnC ligand binding domain 72 144 1.3E-15 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 Gene3D G3DSA:3.30.70.920 58 141 1.1E-18 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 2.6E-14 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 7.8E-13 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 7.8E-13 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 7.8E-13 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 SUPERFAMILY SSF46785 4 64 8.77E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20315 77fb1d91cdfdaf8452a4a464314c8483 153 SMART SM00344 4 113 7.1E-35 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 S40542_RS15970 81e0e625fd3fa4d35f2fa4ea97b0d9a2 86 Pfam PF01649 Ribosomal protein S20 2 84 2.0E-30 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS15970 81e0e625fd3fa4d35f2fa4ea97b0d9a2 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 4.6E-33 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS15970 81e0e625fd3fa4d35f2fa4ea97b0d9a2 86 SUPERFAMILY SSF46992 3 86 4.58E-34 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS15970 81e0e625fd3fa4d35f2fa4ea97b0d9a2 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 2.0E-33 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS15970 81e0e625fd3fa4d35f2fa4ea97b0d9a2 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 18.203 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS15970 81e0e625fd3fa4d35f2fa4ea97b0d9a2 86 Gene3D G3DSA:1.20.58.110 3 86 4.3E-34 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 2.7E-28 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.7E-28 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.7E-28 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.7E-28 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 Pfam PF00579 tRNA synthetases class I (W and Y) 4 286 9.5E-83 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 2.6E-117 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 41.696 T 11-11-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 Gene3D G3DSA:3.40.50.620 3 209 5.9E-95 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 Gene3D G3DSA:1.10.240.10 210 307 6.8E-16 T 11-11-2016 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 SUPERFAMILY SSF52374 5 330 1.13E-100 T 11-11-2016 S40542_RS01415 5a39b775a26a4f4a179daf76d6b7e8b5 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 SMART SM00267 560 729 3.6E-59 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 SMART SM00086 399 438 380.0 T 11-11-2016 IPR001610 PAC motif S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 SMART SM00086 518 560 2.2E-4 T 11-11-2016 IPR001610 PAC motif S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 SMART SM00091 446 512 3.3E-4 T 11-11-2016 IPR000014 PAS domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 SMART SM00052 739 985 6.9E-100 T 11-11-2016 IPR001633 EAL domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 Gene3D G3DSA:3.30.70.270 573 737 1.2E-51 T 11-11-2016 S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 Pfam PF13426 PAS domain 457 559 1.2E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 Gene3D G3DSA:3.30.450.20 444 554 4.5E-25 T 11-11-2016 S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 SUPERFAMILY SSF55073 576 730 9.42E-46 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 SUPERFAMILY SSF141868 745 992 3.53E-84 T 11-11-2016 IPR001633 EAL domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 SUPERFAMILY SSF55785 454 557 9.07E-26 T 11-11-2016 IPR000014 PAS domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 Pfam PF00563 EAL domain 746 980 3.5E-71 T 11-11-2016 IPR001633 EAL domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 Gene3D G3DSA:3.30.450.20 62 153 3.4E-13 T 11-11-2016 S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 569 727 1.1E-38 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 452 567 9.6E-17 T 11-11-2016 IPR000014 PAS domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 Gene3D G3DSA:3.20.20.450 744 992 9.5E-90 T 11-11-2016 IPR001633 EAL domain S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 Gene3D G3DSA:3.30.450.20 390 443 4.3E-5 T 11-11-2016 S40542_RS18790 edaa30873365baf4c4456af5b31f28e6 995 Pfam PF00990 Diguanylate cyclase, GGDEF domain 571 724 1.6E-46 T 11-11-2016 IPR000160 GGDEF domain S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 2.3E-22 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 Gene3D G3DSA:1.10.287.180 1 75 6.2E-23 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 Gene3D G3DSA:3.10.50.30 76 156 5.4E-26 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 156 1.0E-73 T 11-11-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 SUPERFAMILY SSF46557 3 78 9.55E-26 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 PIRSF PIRSF006092 1 157 5.3E-42 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.3E-23 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 51.033 T 11-11-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 SUPERFAMILY SSF54534 80 156 4.32E-20 T 11-11-2016 S40542_RS02035 94abd2876b4515109dbbe96ab70919fd 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 25.143 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 6 589 2.5E-258 T 11-11-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 Gene3D G3DSA:2.40.50.100 523 593 2.3E-22 T 11-11-2016 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 Pfam PF00364 Biotin-requiring enzyme 528 593 5.3E-17 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 Pfam PF00682 HMGL-like 4 269 6.1E-53 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 SUPERFAMILY SSF51569 2 281 8.42E-85 T 11-11-2016 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 Gene3D G3DSA:3.20.20.70 2 281 1.4E-108 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 Pfam PF02436 Conserved carboxylase domain 291 496 1.1E-58 T 11-11-2016 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 SUPERFAMILY SSF89000 296 457 7.45E-51 T 11-11-2016 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS05280 9f1c7953ccb77ac5dc3dce4b372686ee 594 SUPERFAMILY SSF51230 516 592 7.72E-19 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS13715 bb672e1343bf462f4ec8ce727746d132 479 Pfam PF00474 Sodium:solute symporter family 42 411 7.9E-16 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 S40542_RS04740 b3f5ddec70a87c763fabb7ce37926a81 182 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 179 4.5E-73 T 11-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 S40542_RS04740 b3f5ddec70a87c763fabb7ce37926a81 182 PIRSF PIRSF004682 1 181 6.0E-67 T 11-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 S40542_RS04740 b3f5ddec70a87c763fabb7ce37926a81 182 Gene3D G3DSA:3.40.50.1000 1 180 1.0E-64 T 11-11-2016 IPR023214 HAD-like domain S40542_RS04740 b3f5ddec70a87c763fabb7ce37926a81 182 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 153 5.9E-44 T 11-11-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 S40542_RS04740 b3f5ddec70a87c763fabb7ce37926a81 182 Pfam PF13242 HAD-hyrolase-like 107 176 5.0E-14 T 11-11-2016 S40542_RS04740 b3f5ddec70a87c763fabb7ce37926a81 182 SUPERFAMILY SSF56784 1 181 6.51E-54 T 11-11-2016 IPR023214 HAD-like domain S40542_RS04740 b3f5ddec70a87c763fabb7ce37926a81 182 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 154 3.1E-39 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 Gene3D G3DSA:2.120.10.30 318 466 2.2E-9 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 Gene3D G3DSA:2.120.10.30 572 622 2.2E-9 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 Gene3D G3DSA:2.120.10.30 188 268 1.4E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 SUPERFAMILY SSF46894 13 106 1.5E-16 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 106 7.5E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 SUPERFAMILY SSF50969 361 467 5.1E-13 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 SUPERFAMILY SSF50969 510 549 5.1E-13 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 SUPERFAMILY SSF50969 591 685 5.1E-13 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 Gene3D G3DSA:1.10.10.10 11 106 1.7E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 SUPERFAMILY SSF82171 188 377 7.06E-9 T 11-11-2016 S40542_RS20665 2e7a343d1a0aaed58b4db546a99413a3 706 SMART SM00862 30 106 1.6E-9 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS00055 26b410d19361986b2b5788f3e9869301 622 Pfam PF01464 Transglycosylase SLT domain 464 566 8.7E-23 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 S40542_RS00055 26b410d19361986b2b5788f3e9869301 622 Gene3D G3DSA:1.10.1240.20 387 453 1.0E-15 T 11-11-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 S40542_RS00055 26b410d19361986b2b5788f3e9869301 622 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 482 510 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 S40542_RS00055 26b410d19361986b2b5788f3e9869301 622 Gene3D G3DSA:1.25.20.10 17 368 1.6E-80 T 11-11-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 S40542_RS00055 26b410d19361986b2b5788f3e9869301 622 SUPERFAMILY SSF48435 16 458 7.06E-109 T 11-11-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 S40542_RS00055 26b410d19361986b2b5788f3e9869301 622 Pfam PF14718 Soluble lytic murein transglycosylase L domain 387 453 8.0E-20 T 11-11-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 S40542_RS00055 26b410d19361986b2b5788f3e9869301 622 SUPERFAMILY SSF53955 430 600 2.84E-42 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS00055 26b410d19361986b2b5788f3e9869301 622 Gene3D G3DSA:1.10.530.10 456 605 1.7E-44 T 11-11-2016 S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 8.8E-147 T 11-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 SUPERFAMILY SSF53383 11 395 4.44E-125 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 Pfam PF00202 Aminotransferase class-III 17 395 9.4E-127 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 Gene3D G3DSA:3.90.1150.10 302 397 8.8E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 Gene3D G3DSA:3.90.1150.10 9 55 8.8E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 9 396 44.52 T 11-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 2.4E-213 T 11-11-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 S40542_RS01570 b694816dc1a6334edaac9742b605fb8a 403 Gene3D G3DSA:3.40.640.10 56 297 3.1E-89 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS08255 aee3d767fac40ec04bb16a40a05647d1 721 SMART SM00062 477 700 2.1E-8 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS08255 aee3d767fac40ec04bb16a40a05647d1 721 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 478 697 6.4E-21 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS08255 aee3d767fac40ec04bb16a40a05647d1 721 SUPERFAMILY SSF118215 13 367 1.02E-48 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS08255 aee3d767fac40ec04bb16a40a05647d1 721 Gene3D G3DSA:3.40.190.10 659 697 1.1E-21 T 11-11-2016 S40542_RS08255 aee3d767fac40ec04bb16a40a05647d1 721 Gene3D G3DSA:3.40.190.10 474 563 1.1E-21 T 11-11-2016 S40542_RS08255 aee3d767fac40ec04bb16a40a05647d1 721 SUPERFAMILY SSF53850 461 698 1.41E-25 T 11-11-2016 S40542_RS08255 aee3d767fac40ec04bb16a40a05647d1 721 Pfam PF00375 Sodium:dicarboxylate symporter family 13 368 4.6E-50 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS08255 aee3d767fac40ec04bb16a40a05647d1 721 Gene3D G3DSA:1.10.3860.10 11 372 2.6E-58 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 SUPERFAMILY SSF52172 548 669 2.28E-28 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Gene3D G3DSA:3.30.450.40 17 163 5.3E-12 T 11-11-2016 IPR029016 GAF domain-like S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 SUPERFAMILY SSF55785 177 284 1.43E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Gene3D G3DSA:1.10.287.130 297 364 3.3E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 SUPERFAMILY SSF55874 357 533 5.63E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Pfam PF13492 GAF domain 21 156 2.1E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 SMART SM00448 550 664 4.1E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 SUPERFAMILY SSF55781 22 162 2.09E-14 T 11-11-2016 IPR029016 GAF domain-like S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Gene3D G3DSA:3.30.565.10 371 535 9.8E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Gene3D G3DSA:3.40.50.2300 547 671 2.7E-32 T 11-11-2016 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 529 4.5E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Gene3D G3DSA:3.30.450.20 164 281 3.0E-10 T 11-11-2016 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 SMART SM00387 415 530 1.2E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Pfam PF00072 Response regulator receiver domain 552 660 1.9E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 SUPERFAMILY SSF47384 289 367 1.2E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 SMART SM00388 303 368 6.0E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 304 366 1.9E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 5.7E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 508 5.7E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 5.7E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS12175 3fd35b2d1577d1cbc2faf4c48ff735cd 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 527 5.7E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Gene3D G3DSA:3.40.50.20 3 108 3.4E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.448 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Gene3D G3DSA:1.10.1030.10 400 538 1.9E-54 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Gene3D G3DSA:3.30.470.20 745 934 1.9E-78 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Gene3D G3DSA:3.30.470.20 200 399 2.9E-75 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Gene3D G3DSA:3.40.50.1380 938 1070 6.7E-41 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 SMART SM00851 955 1041 8.6E-31 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 SUPERFAMILY SSF56059 128 401 7.6E-109 T 11-11-2016 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Gene3D G3DSA:3.40.50.20 539 662 8.3E-61 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1051 0.0 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 SUPERFAMILY SSF52440 557 675 3.31E-49 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 SUPERFAMILY SSF48108 397 554 5.36E-54 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Pfam PF02142 MGS-like domain 956 1039 1.4E-17 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Gene3D G3DSA:3.30.1490.20 688 744 7.2E-26 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 SUPERFAMILY SSF52440 1 127 1.58E-50 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.6E-42 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.5E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.5E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 SUPERFAMILY SSF52335 937 1070 1.7E-38 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 SUPERFAMILY SSF56059 673 933 3.18E-102 T 11-11-2016 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Gene3D G3DSA:3.30.1490.20 141 199 1.2E-25 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 SMART SM01096 424 547 1.3E-78 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.141 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 1.8E-72 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS09145 227935cdf7b91ede298fa2e50bc8b013 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 2.9E-36 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS11365 28a40f58cf339a40be4976f25ca68fe1 66 PRINTS PR00064 Ribosomal protein L35 signature 4 21 1.7E-20 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 S40542_RS11365 28a40f58cf339a40be4976f25ca68fe1 66 PRINTS PR00064 Ribosomal protein L35 signature 37 55 1.7E-20 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 S40542_RS11365 28a40f58cf339a40be4976f25ca68fe1 66 PRINTS PR00064 Ribosomal protein L35 signature 22 36 1.7E-20 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 S40542_RS11365 28a40f58cf339a40be4976f25ca68fe1 66 Pfam PF01632 Ribosomal protein L35 3 63 2.0E-22 T 11-11-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS11365 28a40f58cf339a40be4976f25ca68fe1 66 SUPERFAMILY SSF143034 3 65 1.27E-21 T 11-11-2016 S40542_RS11365 28a40f58cf339a40be4976f25ca68fe1 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 64 1.2E-22 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 S40542_RS11365 28a40f58cf339a40be4976f25ca68fe1 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 2 65 16.021 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 S40542_RS11365 28a40f58cf339a40be4976f25ca68fe1 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 6 32 - T 11-11-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06855 040830057cb60ca56c19eb080f6546d6 71 Pfam PF01381 Helix-turn-helix 1 47 1.1E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS06855 040830057cb60ca56c19eb080f6546d6 71 SUPERFAMILY SSF47413 1 60 1.39E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS06855 040830057cb60ca56c19eb080f6546d6 71 SMART SM00530 1 52 2.8E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS06855 040830057cb60ca56c19eb080f6546d6 71 Gene3D G3DSA:1.10.260.40 1 56 1.9E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 SUPERFAMILY SSF51735 108 295 2.66E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 SUPERFAMILY SSF55021 333 408 1.57E-18 T 11-11-2016 S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 Gene3D G3DSA:3.30.70.260 324 408 3.2E-29 T 11-11-2016 S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 5.1E-39 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 SUPERFAMILY SSF52283 8 134 1.68E-49 T 11-11-2016 S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 Gene3D G3DSA:3.40.50.720 120 297 1.6E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 Gene3D G3DSA:3.40.50.720 8 119 3.7E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 Pfam PF01842 ACT domain 343 400 1.0E-7 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 S40542_RS04870 ec7a7166fafe261c5cad399987bee2c9 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 5.4E-51 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 SMART SM01340 211 326 8.5E-40 T 11-11-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 SUPERFAMILY SSF55874 2 204 3.54E-54 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 Pfam PF08676 MutL C terminal dimerisation domain 496 575 1.2E-7 T 11-11-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 306 1.4E-96 T 11-11-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 SUPERFAMILY SSF54211 190 324 1.44E-29 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 Gene3D G3DSA:3.30.230.10 219 324 1.3E-28 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 324 1.7E-28 T 11-11-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 3.3E-13 T 11-11-2016 S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 Gene3D G3DSA:3.30.565.10 2 216 7.2E-77 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-11-2016 IPR014762 DNA mismatch repair, conserved site S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 SUPERFAMILY SSF118116 469 587 7.32E-15 T 11-11-2016 S40542_RS04085 591d4699ff82108ec5a12afb7650a966 638 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 617 22.149 T 11-11-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 S40542_RS06265 6c1a0d2f121f8c5bef4d3a4f76b0393b 227 SUPERFAMILY SSF53335 32 190 4.27E-18 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS06265 6c1a0d2f121f8c5bef4d3a4f76b0393b 227 Pfam PF08241 Methyltransferase domain 62 155 3.9E-8 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 S40542_RS06265 6c1a0d2f121f8c5bef4d3a4f76b0393b 227 Gene3D G3DSA:3.40.50.150 46 194 6.7E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 SUPERFAMILY SSF46548 7 157 2.56E-39 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 Gene3D G3DSA:3.50.50.60 237 399 5.2E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 9.9E-37 T 11-11-2016 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 9.9E-37 T 11-11-2016 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 9.9E-37 T 11-11-2016 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 9.9E-37 T 11-11-2016 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 9.9E-37 T 11-11-2016 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 Gene3D G3DSA:3.40.50.720 400 470 4.3E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 Gene3D G3DSA:3.40.50.720 150 236 4.3E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 458 5.1E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 Gene3D G3DSA:1.10.1060.10 4 149 1.0E-44 T 11-11-2016 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.3E-37 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 7.1E-247 T 11-11-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 S40542_RS14745 a81e8b8ebf8e847c12cb81cc5c5ea3fd 471 SUPERFAMILY SSF51971 145 400 5.0E-68 T 11-11-2016 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 SUPERFAMILY SSF51735 160 313 1.46E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS17675 1377279f411e4342b1017ac44359b788 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 415 3.7E-144 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 SUPERFAMILY SSF69075 315 415 1.31E-23 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 SUPERFAMILY SSF69742 1 156 7.45E-49 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 412 1.6E-20 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 Gene3D G3DSA:3.40.50.720 182 354 2.7E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS17675 1377279f411e4342b1017ac44359b788 418 PIRSF PIRSF000445 1 418 2.0E-155 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-11-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.9E-52 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.711 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 S40542_RS17675 1377279f411e4342b1017ac44359b788 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 3.0E-48 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-11-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.305 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 8.8E-61 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 157 2.0E-68 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 4.4E-39 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 4.4E-39 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 4.4E-39 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 4.4E-39 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 4.4E-39 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 Gene3D G3DSA:3.30.420.10 3 156 2.1E-65 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS14690 ba18696bd008671bfcbe2ddcbc96cf18 173 SUPERFAMILY SSF53098 3 156 8.72E-54 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS03180 a0ef8ec1c037793d045a19d1852d43e5 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 392 411 1.2E-18 T 11-11-2016 IPR003004 GspF/PilC family S40542_RS03180 a0ef8ec1c037793d045a19d1852d43e5 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 390 1.2E-18 T 11-11-2016 IPR003004 GspF/PilC family S40542_RS03180 a0ef8ec1c037793d045a19d1852d43e5 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 172 200 1.2E-18 T 11-11-2016 IPR003004 GspF/PilC family S40542_RS03180 a0ef8ec1c037793d045a19d1852d43e5 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 73 85 1.2E-18 T 11-11-2016 IPR003004 GspF/PilC family S40542_RS03180 a0ef8ec1c037793d045a19d1852d43e5 411 Pfam PF00482 Type II secretion system (T2SS), protein F 78 200 5.8E-31 T 11-11-2016 IPR018076 Type II secretion system F domain S40542_RS03180 a0ef8ec1c037793d045a19d1852d43e5 411 Pfam PF00482 Type II secretion system (T2SS), protein F 282 403 3.3E-29 T 11-11-2016 IPR018076 Type II secretion system F domain S40542_RS03180 a0ef8ec1c037793d045a19d1852d43e5 411 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 172 200 - T 11-11-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 S40542_RS15575 b2ab17ed01b840f32108e2da44022086 177 Gene3D G3DSA:3.30.70.260 6 84 2.3E-24 T 11-11-2016 S40542_RS15575 b2ab17ed01b840f32108e2da44022086 177 PIRSF PIRSF028103 5 177 1.3E-41 T 11-11-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 S40542_RS15575 b2ab17ed01b840f32108e2da44022086 177 Gene3D G3DSA:3.30.70.260 94 169 7.5E-11 T 11-11-2016 S40542_RS15575 b2ab17ed01b840f32108e2da44022086 177 SUPERFAMILY SSF55021 94 175 1.37E-11 T 11-11-2016 S40542_RS15575 b2ab17ed01b840f32108e2da44022086 177 Pfam PF13740 ACT domain 7 82 2.3E-22 T 11-11-2016 S40542_RS15575 b2ab17ed01b840f32108e2da44022086 177 SUPERFAMILY SSF55021 5 84 9.47E-16 T 11-11-2016 S40542_RS20105 bf06887e916f6327d587b347f2c46b64 607 Gene3D G3DSA:3.40.50.10090 145 249 7.8E-13 T 11-11-2016 S40542_RS20105 bf06887e916f6327d587b347f2c46b64 607 SUPERFAMILY SSF69618 4 245 3.4E-41 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20105 bf06887e916f6327d587b347f2c46b64 607 Gene3D G3DSA:3.40.50.10090 30 144 9.0E-14 T 11-11-2016 S40542_RS20105 bf06887e916f6327d587b347f2c46b64 607 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 286 606 1.7E-38 T 11-11-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX S40542_RS20105 bf06887e916f6327d587b347f2c46b64 607 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 240 8.0E-32 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS20105 bf06887e916f6327d587b347f2c46b64 607 Gene3D G3DSA:3.10.196.10 335 425 7.2E-4 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS01030 b0b0e1dac3f0f74052cc57ed77feaf5e 600 Pfam PF00005 ABC transporter 381 529 4.2E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS01030 b0b0e1dac3f0f74052cc57ed77feaf5e 600 SMART SM00382 390 574 3.2E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS01030 b0b0e1dac3f0f74052cc57ed77feaf5e 600 Pfam PF00664 ABC transporter transmembrane region 76 315 5.0E-24 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS01030 b0b0e1dac3f0f74052cc57ed77feaf5e 600 Gene3D G3DSA:3.40.50.300 365 597 2.2E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01030 b0b0e1dac3f0f74052cc57ed77feaf5e 600 SUPERFAMILY SSF52540 362 599 2.88E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01030 b0b0e1dac3f0f74052cc57ed77feaf5e 600 SUPERFAMILY SSF90123 13 340 8.76E-50 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS01030 b0b0e1dac3f0f74052cc57ed77feaf5e 600 Gene3D G3DSA:1.20.1560.10 17 340 2.4E-45 T 11-11-2016 S40542_RS01030 b0b0e1dac3f0f74052cc57ed77feaf5e 600 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 Pfam PF04324 BFD-like [2Fe-2S] binding domain 383 434 1.1E-10 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 Gene3D G3DSA:3.50.50.60 122 332 8.4E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 SUPERFAMILY SSF51905 7 335 2.89E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 Gene3D G3DSA:3.50.50.60 6 121 2.1E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 3.2E-5 T 11-11-2016 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 3.2E-5 T 11-11-2016 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.2E-5 T 11-11-2016 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.4E-10 T 11-11-2016 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 2.4E-10 T 11-11-2016 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 2.4E-10 T 11-11-2016 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 PIRSF PIRSF037495 1 467 5.5E-124 T 11-11-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 S40542_RS17835 1d2eafa7f548a41fcda78a3148941c04 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 312 6.1E-17 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS18265 3b8087feae7510d9ffa70cb46928c786 260 Pfam PF11101 Protein of unknown function (DUF2884) 29 256 2.4E-62 T 11-11-2016 IPR021307 Protein of unknown function DUF2884 S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Gene3D G3DSA:2.30.38.10 730 802 8.2E-15 T 11-11-2016 S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 SUPERFAMILY SSF53474 998 1261 1.01E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Pfam PF00975 Thioesterase domain 1010 1136 4.5E-19 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Gene3D G3DSA:3.40.50.980 574 718 3.9E-30 T 11-11-2016 S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Gene3D G3DSA:3.40.50.1820 1211 1261 1.3E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Gene3D G3DSA:3.40.50.1820 1000 1110 1.3E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 SUPERFAMILY SSF52777 185 393 1.01E-17 T 11-11-2016 S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Pfam PF00550 Phosphopantetheine attachment site 925 991 9.7E-6 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 SUPERFAMILY SSF47336 916 991 1.31E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Gene3D G3DSA:3.40.50.980 428 573 3.5E-30 T 11-11-2016 S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Pfam PF00668 Condensation domain 159 292 1.9E-9 T 11-11-2016 IPR001242 Condensation domain S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Gene3D G3DSA:1.10.1200.10 929 997 5.8E-21 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Gene3D G3DSA:3.30.300.30 808 928 1.7E-29 T 11-11-2016 S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 SUPERFAMILY SSF56801 396 931 1.19E-106 T 11-11-2016 S40542_RS19790 36f65712689a6092af0e1a3f70bbc8e0 1270 Pfam PF00501 AMP-binding enzyme 438 813 4.3E-65 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS09405 0a80f1ab104d030caa19dfe0b11d34e3 238 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 39 207 1.6E-68 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 S40542_RS09405 0a80f1ab104d030caa19dfe0b11d34e3 238 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 238 78.09 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 S40542_RS09405 0a80f1ab104d030caa19dfe0b11d34e3 238 SUPERFAMILY SSF55729 7 231 3.03E-84 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS09405 0a80f1ab104d030caa19dfe0b11d34e3 238 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 42 221 2.4E-60 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 S40542_RS19230 b9f3a354740ebd465ff849534ef0cc4d 315 SUPERFAMILY SSF56059 94 298 2.69E-38 T 11-11-2016 S40542_RS19230 b9f3a354740ebd465ff849534ef0cc4d 315 Gene3D G3DSA:3.30.470.20 178 276 2.5E-20 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS19230 b9f3a354740ebd465ff849534ef0cc4d 315 Gene3D G3DSA:3.40.50.20 23 118 4.0E-8 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS19230 b9f3a354740ebd465ff849534ef0cc4d 315 Pfam PF08443 RimK-like ATP-grasp domain 102 277 1.7E-22 T 11-11-2016 IPR013651 ATP-grasp fold, RimK-type S40542_RS19230 b9f3a354740ebd465ff849534ef0cc4d 315 Gene3D G3DSA:3.30.1490.20 129 177 2.3E-8 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 SUPERFAMILY SSF52540 4 189 6.88E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 11-11-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 Hamap MF_00328 Guanylate kinase [gmk]. 4 187 37.724 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 Gene3D G3DSA:3.40.50.300 1 21 2.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 Gene3D G3DSA:3.40.50.300 88 204 2.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 Gene3D G3DSA:3.30.63.10 44 87 1.1E-29 T 11-11-2016 S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 184 3.8E-78 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 Pfam PF00625 Guanylate kinase 7 184 4.7E-61 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 Gene3D G3DSA:3.40.50.300 22 43 6.1E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03385 0a53b03e5cd7539b91089fb8a5fccc3b 207 SMART SM00072 5 187 6.1E-73 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 SUPERFAMILY SSF51735 2 178 7.67E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 SUPERFAMILY SSF55347 156 308 4.11E-44 T 11-11-2016 S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 334 8.4E-109 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 148 1.3E-26 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 151 167 - T 11-11-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 SMART SM00859 3 148 2.6E-43 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 Gene3D G3DSA:3.40.50.720 1 164 2.8E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 Gene3D G3DSA:3.30.360.10 165 308 1.2E-43 T 11-11-2016 S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 165 311 1.8E-12 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 S40542_RS18370 0a5360e064847278d266fdd1ff11d1de 335 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 34.998 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Gene3D G3DSA:3.30.56.10 1 38 1.2E-24 T 11-11-2016 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Gene3D G3DSA:3.30.56.10 155 183 1.2E-24 T 11-11-2016 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 SUPERFAMILY SSF54991 697 794 2.09E-30 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 SUPERFAMILY SSF50249 35 195 4.41E-47 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Pfam PF03483 B3/4 domain 212 384 3.1E-67 T 11-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Gene3D G3DSA:3.50.40.10 198 392 2.4E-79 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 SMART SM00896 701 794 2.4E-43 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 45.89 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 SMART SM00874 403 471 9.5E-30 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 SUPERFAMILY SSF56037 196 396 2.46E-72 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Gene3D G3DSA:2.40.50.140 41 154 1.7E-43 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 8.4E-269 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Gene3D G3DSA:3.30.70.380 703 794 6.0E-30 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Gene3D G3DSA:3.30.930.10 497 690 1.4E-62 T 11-11-2016 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 SMART SM00873 212 385 1.7E-90 T 11-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 SUPERFAMILY SSF55681 467 689 7.45E-50 T 11-11-2016 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Gene3D G3DSA:3.30.56.20 403 475 8.7E-27 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.9E-27 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 SUPERFAMILY SSF46955 404 475 2.11E-20 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 5.1E-19 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 S40542_RS07040 7167b9b42b27ef79d70734575fb02942 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.5E-26 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 S40542_RS03230 0b3dbe0ef82fca266d9418401324ab05 314 Pfam PF03186 CobD/Cbib protein 28 292 1.0E-29 T 11-11-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 PIRSF PIRSF000006 1 321 8.6E-97 T 11-11-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 Gene3D G3DSA:1.10.760.10 144 238 8.2E-32 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 Gene3D G3DSA:1.10.760.10 60 82 8.2E-32 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 Gene3D G3DSA:1.10.760.10 239 320 4.9E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 235 314 6.6E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 149 223 5.4E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 82 2.5E-22 T 11-11-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 SUPERFAMILY SSF46626 55 78 5.36E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 SUPERFAMILY SSF46626 129 233 5.36E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 32 319 6.5E-74 T 11-11-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 PRINTS PR00605 Class IC cytochrome C signature 159 170 3.5E-5 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 PRINTS PR00605 Class IC cytochrome C signature 201 223 3.5E-5 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 S40542_RS09195 11679d5a6e1626b6e48bb602549dbb14 321 SUPERFAMILY SSF46626 233 319 5.85E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 11 279 2.5E-114 T 11-11-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 Gene3D G3DSA:1.10.340.30 27 128 1.2E-45 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 SUPERFAMILY SSF48150 9 230 9.74E-75 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 Gene3D G3DSA:1.10.1670.10 129 229 5.8E-37 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 SUPERFAMILY SSF55811 225 348 6.69E-18 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 Gene3D G3DSA:3.90.79.10 234 349 1.7E-14 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 Pfam PF00633 Helix-hairpin-helix motif 104 132 1.2E-6 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 Pfam PF14815 NUDIX domain 241 346 1.2E-18 T 11-11-2016 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 ProSitePatterns PS01155 Endonuclease III family signature. 107 136 - T 11-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 173 4.6E-21 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 S40542_RS03280 b21047ccb707fcf0219f212550dc0cd6 352 SMART SM00478 44 195 3.7E-50 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 1.8E-154 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 SUPERFAMILY SSF69336 1208 1464 1.26E-86 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 Gene3D G3DSA:3.60.20.10 12 434 1.2E-166 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 Gene3D G3DSA:2.160.20.60 1210 1464 4.6E-91 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 Gene3D G3DSA:3.20.20.70 437 775 7.1E-100 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 Pfam PF04898 Glutamate synthase central domain 457 735 1.0E-103 T 11-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 Gene3D G3DSA:3.20.20.70 809 1193 1.7E-167 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 Pfam PF01493 GXGXG motif 1235 1417 4.7E-75 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 SUPERFAMILY SSF56235 12 429 7.89E-147 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 425 9.8E-173 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain S40542_RS14750 153023b1566d5db0703db4a29eaef1dc 1485 SUPERFAMILY SSF51395 452 1201 2.44E-249 T 11-11-2016 S40542_RS02010 f89de3ee0afa2be7f4446fe0ea9c57a7 222 SUPERFAMILY SSF53271 46 218 1.01E-23 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS02010 f89de3ee0afa2be7f4446fe0ea9c57a7 222 Gene3D G3DSA:3.40.50.2020 66 215 1.8E-23 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS02010 f89de3ee0afa2be7f4446fe0ea9c57a7 222 Pfam PF00156 Phosphoribosyl transferase domain 144 216 9.1E-10 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 Gene3D G3DSA:3.40.50.300 307 510 2.2E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 SMART SM00962 310 511 9.1E-121 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 SUPERFAMILY SSF47364 210 288 1.44E-22 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 SUPERFAMILY SSF52540 308 511 6.32E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 238 511 63.587 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 484 497 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 Pfam PF02881 SRP54-type protein, helical bundle domain 226 291 5.0E-14 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 SMART SM00382 309 489 6.8E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 Pfam PF00448 SRP54-type protein, GTPase domain 311 510 3.1E-76 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 238 510 1.2E-112 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 Gene3D G3DSA:1.20.120.140 199 291 1.1E-34 T 11-11-2016 S40542_RS17995 b7a4fd979f4baceb8440f6a5e51d70ae 518 SMART SM00963 215 295 6.1E-26 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 98 2.0E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 Gene3D G3DSA:2.120.10.30 174 430 3.7E-15 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 Gene3D G3DSA:1.10.10.10 7 101 4.3E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 SUPERFAMILY SSF82171 330 536 4.05E-19 T 11-11-2016 S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 SUPERFAMILY SSF82171 174 249 4.05E-19 T 11-11-2016 S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 SUPERFAMILY SSF82171 576 602 4.05E-19 T 11-11-2016 S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 Gene3D G3DSA:2.120.10.60 431 615 8.2E-11 T 11-11-2016 S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 SUPERFAMILY SSF46894 4 98 7.65E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 SMART SM00862 22 98 5.3E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 Pfam PF07676 WD40-like Beta Propeller Repeat 177 200 0.0016 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS09755 1768bfa1b1da8026ce3abc3e28c338fd 710 Pfam PF07676 WD40-like Beta Propeller Repeat 233 248 0.032 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 PRINTS PR00738 Glycosyl hydrolase family 20 signature 111 131 2.3E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 PRINTS PR00738 Glycosyl hydrolase family 20 signature 173 194 2.3E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 PRINTS PR00738 Glycosyl hydrolase family 20 signature 557 574 2.3E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 PRINTS PR00738 Glycosyl hydrolase family 20 signature 144 161 2.3E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 PRINTS PR00738 Glycosyl hydrolase family 20 signature 225 242 2.3E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 PRINTS PR00738 Glycosyl hydrolase family 20 signature 540 556 2.3E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 Gene3D G3DSA:3.30.379.10 3 146 7.5E-21 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 SUPERFAMILY SSF51445 150 407 6.06E-101 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 SUPERFAMILY SSF51445 506 588 6.06E-101 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 SUPERFAMILY SSF55545 14 149 1.94E-20 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 Gene3D G3DSA:3.20.20.80 522 609 3.7E-124 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 Gene3D G3DSA:3.20.20.80 148 431 3.7E-124 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 24 146 1.0E-15 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 513 575 1.5E-11 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS19945 2fd90b85e652b3b52c1ce6fd257e3e10 787 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 150 411 2.2E-80 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS08865 bb19894ac9495943b08dfb9379051351 184 Pfam PF04315 Elongation factor P hydroxylase 10 172 1.6E-76 T 11-11-2016 IPR007411 Elongation factor P hydroxylase S40542_RS03360 6cd8d2ef60fd79127a6d93b6a76044db 331 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 331 2.0E-158 T 11-11-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 S40542_RS03360 6cd8d2ef60fd79127a6d93b6a76044db 331 Gene3D G3DSA:3.30.930.10 2 327 1.1E-149 T 11-11-2016 S40542_RS03360 6cd8d2ef60fd79127a6d93b6a76044db 331 PIRSF PIRSF001555 1 330 7.7E-146 T 11-11-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 S40542_RS03360 6cd8d2ef60fd79127a6d93b6a76044db 331 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 331 44.02 T 11-11-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 S40542_RS03360 6cd8d2ef60fd79127a6d93b6a76044db 331 SUPERFAMILY SSF55681 6 328 2.98E-93 T 11-11-2016 S40542_RS03360 6cd8d2ef60fd79127a6d93b6a76044db 331 Pfam PF03590 Aspartate-ammonia ligase 9 245 1.6E-95 T 11-11-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 S40542_RS10980 4818ebebdcb1786c8061dc101e633821 149 Gene3D G3DSA:2.60.40.420 23 148 3.4E-50 T 11-11-2016 IPR008972 Cupredoxin S40542_RS10980 4818ebebdcb1786c8061dc101e633821 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 148 4.9E-23 T 11-11-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 S40542_RS10980 4818ebebdcb1786c8061dc101e633821 149 TIGRFAM TIGR02695 azurin: azurin 24 148 9.7E-58 T 11-11-2016 IPR014068 Azurin, proteobacteria S40542_RS10980 4818ebebdcb1786c8061dc101e633821 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 148 7.0E-44 T 11-11-2016 S40542_RS10980 4818ebebdcb1786c8061dc101e633821 149 SUPERFAMILY SSF49503 23 148 9.57E-42 T 11-11-2016 IPR008972 Cupredoxin S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 4.9E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 4.9E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 4.9E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 Pfam PF00106 short chain dehydrogenase 5 190 1.6E-50 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.7E-34 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.7E-34 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 4.7E-34 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.7E-34 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.7E-34 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 4.7E-34 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 SUPERFAMILY SSF51735 3 238 6.72E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 Gene3D G3DSA:3.40.50.720 2 238 4.9E-72 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13765 a798545a20f888d55771e69fad0127f7 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS06960 173f87f86a9b9e9c060838b8f8871858 459 SUPERFAMILY SSF56496 271 320 2.54E-8 T 11-11-2016 IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain S40542_RS06960 173f87f86a9b9e9c060838b8f8871858 459 Gene3D G3DSA:3.90.215.10 255 321 4.9E-8 T 11-11-2016 IPR014716 Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 S40542_RS06960 173f87f86a9b9e9c060838b8f8871858 459 Pfam PF00147 Fibrinogen beta and gamma chains, C-terminal globular domain 280 385 4.1E-5 T 11-11-2016 IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain S40542_RS13385 db87768b3e947c0b63b11a27f7587453 567 SUPERFAMILY SSF48371 420 543 4.1E-8 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 S40542_RS13385 db87768b3e947c0b63b11a27f7587453 567 Pfam PF13646 HEAT repeats 412 484 3.4E-7 T 11-11-2016 S40542_RS13385 db87768b3e947c0b63b11a27f7587453 567 Gene3D G3DSA:1.25.10.10 340 540 7.4E-9 T 11-11-2016 IPR011989 Armadillo-like helical S40542_RS13385 db87768b3e947c0b63b11a27f7587453 567 SUPERFAMILY SSF48431 304 478 9.42E-7 T 11-11-2016 IPR011030 Vitellinogen, superhelical GO:0005319|GO:0006869 Reactome: R-HSA-174800 S40542_RS18665 37795446863b9d562dbae0ac8cd5525c 266 Pfam PF04338 Protein of unknown function, DUF481 40 266 4.0E-60 T 11-11-2016 IPR007433 Protein of unknown function DUF481 S40542_RS01270 35b03e3f13f3a62254e427750ce2692b 351 SUPERFAMILY SSF52768 25 347 1.3E-43 T 11-11-2016 S40542_RS01270 35b03e3f13f3a62254e427750ce2692b 351 Pfam PF00491 Arginase family 132 332 6.8E-19 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 S40542_RS01270 35b03e3f13f3a62254e427750ce2692b 351 Gene3D G3DSA:3.40.800.10 20 345 3.8E-46 T 11-11-2016 IPR023696 Ureohydrolase domain S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 SUPERFAMILY SSF52954 288 387 7.85E-17 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 SUPERFAMILY SSF55681 5 287 4.4E-83 T 11-11-2016 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 Pfam PF03129 Anticodon binding domain 306 387 8.5E-12 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 Gene3D G3DSA:3.30.930.10 4 291 3.9E-103 T 11-11-2016 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 3 385 7.2E-132 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 83 290 1.1E-35 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 PRINTS PR01047 Threonyl-tRNA synthetase signature 295 307 1.2E-42 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 PRINTS PR01047 Threonyl-tRNA synthetase signature 225 253 1.2E-42 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 PRINTS PR01047 Threonyl-tRNA synthetase signature 268 281 1.2E-42 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 PRINTS PR01047 Threonyl-tRNA synthetase signature 88 116 1.2E-42 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 PRINTS PR01047 Threonyl-tRNA synthetase signature 121 144 1.2E-42 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11215 25ea6362ba2abe53312c915fce35f2f4 393 Gene3D G3DSA:3.40.50.800 292 385 9.8E-16 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS03690 9d2f27b6af213141e900370caab02138 160 SUPERFAMILY SSF54611 6 149 6.1E-53 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS03690 9d2f27b6af213141e900370caab02138 160 Pfam PF02556 Preprotein translocase subunit SecB 12 150 1.3E-57 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS03690 9d2f27b6af213141e900370caab02138 160 Hamap MF_00821 Protein-export protein SecB [secB]. 1 152 33.993 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS03690 9d2f27b6af213141e900370caab02138 160 Gene3D G3DSA:3.10.420.10 11 158 1.0E-62 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS03690 9d2f27b6af213141e900370caab02138 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 20 37 5.2E-39 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS03690 9d2f27b6af213141e900370caab02138 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 104 126 5.2E-39 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS03690 9d2f27b6af213141e900370caab02138 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 130 148 5.2E-39 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS03690 9d2f27b6af213141e900370caab02138 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 80 100 5.2E-39 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS03690 9d2f27b6af213141e900370caab02138 160 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 15 150 2.6E-59 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 S40542_RS20185 d2ab31f1788f777916917e6dd339eb3b 232 SMART SM00363 1 61 2.7E-7 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS20185 d2ab31f1788f777916917e6dd339eb3b 232 SUPERFAMILY SSF55120 61 216 1.37E-33 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS20185 d2ab31f1788f777916917e6dd339eb3b 232 Pfam PF00849 RNA pseudouridylate synthase 62 185 3.5E-13 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS20185 d2ab31f1788f777916917e6dd339eb3b 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 219 1.3E-40 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 S40542_RS20185 d2ab31f1788f777916917e6dd339eb3b 232 Pfam PF01479 S4 domain 1 35 1.5E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS20185 d2ab31f1788f777916917e6dd339eb3b 232 Gene3D G3DSA:3.10.290.10 1 53 2.3E-16 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS20185 d2ab31f1788f777916917e6dd339eb3b 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 96 110 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 S40542_RS20185 d2ab31f1788f777916917e6dd339eb3b 232 SUPERFAMILY SSF55174 1 53 8.92E-12 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 Gene3D G3DSA:1.20.200.10 108 375 5.7E-100 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 8.3E-69 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 8.3E-69 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 8.3E-69 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 8.3E-69 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 8.3E-69 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 8.3E-69 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 Pfam PF14698 Argininosuccinate lyase C-terminal 365 432 2.6E-21 T 11-11-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 SUPERFAMILY SSF48557 3 455 8.64E-143 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 7.0E-195 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.633 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.1E-28 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.1E-28 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.1E-28 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS18350 b2c5af83afe1e231202750103915c383 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.1E-28 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS18350 b2c5af83afe1e231202750103915c383 458 Gene3D G3DSA:1.10.40.30 376 432 3.3E-26 T 11-11-2016 S40542_RS18350 b2c5af83afe1e231202750103915c383 458 Pfam PF00206 Lyase 6 301 2.3E-84 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal S40542_RS18350 b2c5af83afe1e231202750103915c383 458 Gene3D G3DSA:1.10.275.10 1 107 2.8E-36 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal S40542_RS04710 6fc8152ce5f09211a7772ea6be942b81 420 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 211 9.7E-59 T 11-11-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 S40542_RS04710 6fc8152ce5f09211a7772ea6be942b81 420 SUPERFAMILY SSF53756 52 419 1.26E-14 T 11-11-2016 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 PIRSF PIRSF000124 1 388 4.6E-133 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 SUPERFAMILY SSF48179 191 287 4.08E-30 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 SUPERFAMILY SSF52413 283 388 2.88E-26 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.1E-26 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 SUPERFAMILY SSF51735 1 194 6.79E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 Gene3D G3DSA:1.10.1040.10 198 284 3.6E-34 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 SMART SM00984 300 387 5.3E-13 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 PIRSF PIRSF500134 1 344 1.2E-118 T 11-11-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 2.0E-7 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 Gene3D G3DSA:3.40.50.720 285 388 3.7E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.0E-102 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 Gene3D G3DSA:3.40.50.720 1 197 1.1E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18595 09cfe3c3282be741ad49e62bc4f1eb96 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 4.6E-31 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 S40542_RS08520 70168968dac77a4e802c2c93f699ebfc 218 Gene3D G3DSA:1.10.357.10 18 209 1.2E-28 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS08520 70168968dac77a4e802c2c93f699ebfc 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 3.6E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS08520 70168968dac77a4e802c2c93f699ebfc 218 SUPERFAMILY SSF46689 18 97 6.67E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08520 70168968dac77a4e802c2c93f699ebfc 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 4.0E-5 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS08520 70168968dac77a4e802c2c93f699ebfc 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 4.0E-5 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS05065 8efda1acd5bc2d5bf340de6716138879 277 Gene3D G3DSA:3.40.50.1980 140 267 1.8E-35 T 11-11-2016 S40542_RS05065 8efda1acd5bc2d5bf340de6716138879 277 Gene3D G3DSA:3.40.50.1980 19 137 5.7E-30 T 11-11-2016 S40542_RS05065 8efda1acd5bc2d5bf340de6716138879 277 SUPERFAMILY SSF53807 19 268 1.14E-61 T 11-11-2016 S40542_RS05065 8efda1acd5bc2d5bf340de6716138879 277 Pfam PF01497 Periplasmic binding protein 22 246 1.6E-32 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 S40542_RS01175 bdafe2d3f793bb0ad8455a15ee90ee3b 211 Gene3D G3DSA:4.10.960.10 78 159 3.9E-34 T 11-11-2016 S40542_RS01175 bdafe2d3f793bb0ad8455a15ee90ee3b 211 Pfam PF00297 Ribosomal protein L3 52 184 1.8E-16 T 11-11-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01175 bdafe2d3f793bb0ad8455a15ee90ee3b 211 Gene3D G3DSA:2.40.30.10 160 206 2.6E-10 T 11-11-2016 S40542_RS01175 bdafe2d3f793bb0ad8455a15ee90ee3b 211 Gene3D G3DSA:2.40.30.10 4 33 2.6E-10 T 11-11-2016 S40542_RS01175 bdafe2d3f793bb0ad8455a15ee90ee3b 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 103 126 - T 11-11-2016 IPR019926 Ribosomal protein L3, conserved site S40542_RS01175 bdafe2d3f793bb0ad8455a15ee90ee3b 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 209 40.389 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01175 bdafe2d3f793bb0ad8455a15ee90ee3b 211 SUPERFAMILY SSF50447 2 210 1.24E-82 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS01175 bdafe2d3f793bb0ad8455a15ee90ee3b 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 2.4E-90 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS08425 539c49c823b9bea051cfab323132da44 299 Pfam PF12833 Helix-turn-helix domain 49 128 3.7E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS08425 539c49c823b9bea051cfab323132da44 299 SUPERFAMILY SSF46689 80 128 1.34E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08425 539c49c823b9bea051cfab323132da44 299 Gene3D G3DSA:1.10.10.60 26 80 4.7E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08425 539c49c823b9bea051cfab323132da44 299 Gene3D G3DSA:1.10.10.60 81 128 6.3E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08425 539c49c823b9bea051cfab323132da44 299 SUPERFAMILY SSF46689 27 76 3.72E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08425 539c49c823b9bea051cfab323132da44 299 SMART SM00342 43 127 7.5E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS17625 d6746fba3024959196a61a9690065b57 361 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 353 78.832 T 11-11-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 S40542_RS17625 d6746fba3024959196a61a9690065b57 361 Pfam PF01728 FtsJ-like methyltransferase 184 285 7.0E-8 T 11-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 S40542_RS17625 d6746fba3024959196a61a9690065b57 361 SUPERFAMILY SSF53335 183 278 6.61E-14 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS17625 d6746fba3024959196a61a9690065b57 361 PIRSF PIRSF028774 1 357 1.3E-161 T 11-11-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 S40542_RS17625 d6746fba3024959196a61a9690065b57 361 Gene3D G3DSA:3.40.50.150 183 314 3.6E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 SUPERFAMILY SSF103190 80 206 5.02E-6 T 11-11-2016 IPR029151 Periplasmic sensor domain-like S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 Pfam PF02743 Cache domain 40 282 8.8E-27 T 11-11-2016 IPR033479 Double Cache domain 1 S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 Gene3D G3DSA:1.10.287.950 405 621 1.0E-55 T 11-11-2016 S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 SUPERFAMILY SSF58104 343 652 8.76E-75 T 11-11-2016 S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 SMART SM00283 390 651 5.9E-71 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 SMART SM00304 410 477 52.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 SMART SM00304 321 375 1.9E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 650 1.8E-44 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 Pfam PF00672 HAMP domain 302 368 5.3E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00345 ec6505edabcfa95dfdab46761cbd62b8 652 Gene3D G3DSA:3.30.450.20 163 298 4.5E-23 T 11-11-2016 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.6E-30 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 Gene3D G3DSA:3.30.930.10 105 426 6.0E-140 T 11-11-2016 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 PIRSF PIRSF001529 1 429 2.8E-181 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 SUPERFAMILY SSF46589 1 112 3.5E-30 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 1.4E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 1.4E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 1.4E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 1.4E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 1.4E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 Gene3D G3DSA:1.10.287.40 1 104 1.9E-27 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 405 2.8E-33 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 SUPERFAMILY SSF55681 116 423 2.52E-97 T 11-11-2016 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 7.2E-172 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS11025 6df5548607c6f9df62beea6391e2ed85 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 40.936 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 S40542_RS06135 12daabf44d91d43f116cd8602e43ece1 319 Gene3D G3DSA:1.20.1330.10 221 274 1.5E-55 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06135 12daabf44d91d43f116cd8602e43ece1 319 Gene3D G3DSA:1.20.1330.10 54 170 1.5E-55 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06135 12daabf44d91d43f116cd8602e43ece1 319 Pfam PF00700 Bacterial flagellin C-terminal helical region 236 318 7.4E-23 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06135 12daabf44d91d43f116cd8602e43ece1 319 SUPERFAMILY SSF64518 1 318 5.62E-89 T 11-11-2016 S40542_RS06135 12daabf44d91d43f116cd8602e43ece1 319 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-40 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06135 12daabf44d91d43f116cd8602e43ece1 319 PRINTS PR00207 Flagellin signature 76 95 2.5E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06135 12daabf44d91d43f116cd8602e43ece1 319 PRINTS PR00207 Flagellin signature 37 54 2.5E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06135 12daabf44d91d43f116cd8602e43ece1 319 PRINTS PR00207 Flagellin signature 111 134 2.5E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06835 b406243fe0af67cae4f69c2638af395c 561 Pfam PF07670 Nucleoside recognition 267 361 3.4E-10 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 S40542_RS06835 b406243fe0af67cae4f69c2638af395c 561 Gene3D G3DSA:3.40.50.300 13 145 2.4E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06835 b406243fe0af67cae4f69c2638af395c 561 SUPERFAMILY SSF52540 21 148 2.88E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06835 b406243fe0af67cae4f69c2638af395c 561 Pfam PF02421 Ferrous iron transport protein B 21 153 1.2E-6 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 S40542_RS08505 898b862b3fe14bdcc1df458e6f7feae2 120 Gene3D G3DSA:1.10.10.10 15 117 2.5E-35 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08505 898b862b3fe14bdcc1df458e6f7feae2 120 SUPERFAMILY SSF46785 17 116 4.09E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08505 898b862b3fe14bdcc1df458e6f7feae2 120 Pfam PF01638 HxlR-like helix-turn-helix 31 116 1.2E-24 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type S40542_RS17160 560bbb786b0f3caa43c34013b17382e9 456 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 33 402 1.3E-121 T 11-11-2016 IPR020010 Conserved hypothetical protein CHP03503 S40542_RS08690 79b770158e18485c7b06709f0b3266cf 675 Pfam PF00266 Aminotransferase class-V 9 373 1.1E-52 T 11-11-2016 IPR000192 Aminotransferase class V domain S40542_RS08690 79b770158e18485c7b06709f0b3266cf 675 Gene3D G3DSA:3.90.1150.10 263 388 5.9E-22 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS08690 79b770158e18485c7b06709f0b3266cf 675 Gene3D G3DSA:3.40.640.10 22 262 2.5E-54 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS08690 79b770158e18485c7b06709f0b3266cf 675 Gene3D G3DSA:3.40.250.10 575 673 4.3E-13 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS08690 79b770158e18485c7b06709f0b3266cf 675 SUPERFAMILY SSF52821 574 673 1.51E-13 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS08690 79b770158e18485c7b06709f0b3266cf 675 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 208 227 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site S40542_RS08690 79b770158e18485c7b06709f0b3266cf 675 SUPERFAMILY SSF53383 8 388 1.24E-69 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS12620 4113429e2cad273128f12aa0d257943a 655 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 254 431 2.1E-17 T 11-11-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 S40542_RS12620 4113429e2cad273128f12aa0d257943a 655 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 83 167 4.5E-6 T 11-11-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 S40542_RS12620 4113429e2cad273128f12aa0d257943a 655 Gene3D G3DSA:3.40.640.10 97 171 3.6E-78 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS12620 4113429e2cad273128f12aa0d257943a 655 Gene3D G3DSA:3.40.640.10 243 474 3.6E-78 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS12620 4113429e2cad273128f12aa0d257943a 655 SUPERFAMILY SSF53383 19 171 4.31E-67 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS12620 4113429e2cad273128f12aa0d257943a 655 SUPERFAMILY SSF53383 243 571 4.31E-67 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS12620 4113429e2cad273128f12aa0d257943a 655 SUPERFAMILY SSF53383 612 630 4.31E-67 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS05975 f243b10960893e24b12a833242bc4c2e 151 Gene3D G3DSA:3.30.300.70 2 80 2.1E-33 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal S40542_RS05975 f243b10960893e24b12a833242bc4c2e 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.513 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 S40542_RS05975 f243b10960893e24b12a833242bc4c2e 151 SUPERFAMILY SSF74942 84 151 3.4E-17 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal S40542_RS05975 f243b10960893e24b12a833242bc4c2e 151 Gene3D G3DSA:2.30.30.180 88 147 8.5E-14 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal S40542_RS05975 f243b10960893e24b12a833242bc4c2e 151 Pfam PF02576 Putative ribosome maturation factor RimP 11 147 4.0E-50 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 S40542_RS05975 f243b10960893e24b12a833242bc4c2e 151 SUPERFAMILY SSF75420 3 83 1.57E-26 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.2E-15 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 Gene3D G3DSA:1.10.10.10 1 55 7.1E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 SMART SM01134 78 232 7.1E-41 T 11-11-2016 S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 Gene3D G3DSA:3.40.50.1360 76 220 1.5E-5 T 11-11-2016 S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 Pfam PF00455 DeoR C terminal sensor domain 77 231 1.3E-37 T 11-11-2016 IPR014036 DeoR C-terminal sensor domain S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-11-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 SUPERFAMILY SSF46785 3 60 1.53E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 SUPERFAMILY SSF100950 77 232 1.51E-19 T 11-11-2016 S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.0E-10 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.0E-10 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS02475 0861f6ba28199846f11a3e99c3f29d6b 254 SMART SM00420 6 58 1.4E-14 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 PIRSF PIRSF037238 3 362 2.3E-94 T 11-11-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 Pfam PF07687 Peptidase dimerisation domain 166 261 3.9E-15 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 Pfam PF01546 Peptidase family M20/M25/M40 67 358 7.3E-23 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 Gene3D G3DSA:3.30.70.360 179 274 3.6E-23 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 66 75 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 SUPERFAMILY SSF53187 6 178 9.14E-44 T 11-11-2016 S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 SUPERFAMILY SSF53187 286 362 9.14E-44 T 11-11-2016 S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 Gene3D G3DSA:3.40.630.10 303 362 4.0E-44 T 11-11-2016 S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 Gene3D G3DSA:3.40.630.10 7 178 4.0E-44 T 11-11-2016 S40542_RS19235 c976f9572c2311c45d03254e47716f0a 375 SUPERFAMILY SSF55031 169 274 4.34E-21 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS05015 32bb1d5eb1671b513117cde99c787829 343 SUPERFAMILY SSF143631 29 339 5.49E-91 T 11-11-2016 IPR003374 ApbE-like domain S40542_RS05015 32bb1d5eb1671b513117cde99c787829 343 Pfam PF02424 ApbE family 37 317 1.4E-76 T 11-11-2016 IPR024932 Flavin transferase ApbE GO:0017013 S40542_RS05015 32bb1d5eb1671b513117cde99c787829 343 PIRSF PIRSF006268 1 340 1.7E-85 T 11-11-2016 IPR024932 Flavin transferase ApbE GO:0017013 S40542_RS19455 3a8acaf2e34da04e5d39f5628580a0d2 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 275 4.4E-14 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS19455 3a8acaf2e34da04e5d39f5628580a0d2 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 360 3.5E-61 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS19455 3a8acaf2e34da04e5d39f5628580a0d2 366 Gene3D G3DSA:2.40.50.100 166 197 2.8E-13 T 11-11-2016 S40542_RS19455 3a8acaf2e34da04e5d39f5628580a0d2 366 Gene3D G3DSA:2.40.50.100 74 105 2.8E-13 T 11-11-2016 S40542_RS19455 3a8acaf2e34da04e5d39f5628580a0d2 366 SUPERFAMILY SSF111369 61 245 1.28E-27 T 11-11-2016 S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 Gene3D G3DSA:3.40.50.300 450 627 2.7E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 Gene3D G3DSA:3.40.50.300 190 376 3.4E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 SMART SM00487 190 383 5.4E-19 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 722 24.177 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 SUPERFAMILY SSF52540 209 357 7.45E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 SUPERFAMILY SSF52540 498 595 7.45E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 SUPERFAMILY SSF52540 384 435 7.45E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 SMART SM00490 487 584 2.7E-9 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 Pfam PF00270 DEAD/DEAH box helicase 198 361 1.0E-15 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 TIGRFAM TIGR00595 priA: primosomal protein N' 215 720 3.4E-182 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 S40542_RS01315 4ffbff23ba81ff22618f282534b9e69e 723 Pfam PF00271 Helicase conserved C-terminal domain 513 584 5.1E-6 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS14805 b0151b7560bb2cfb6227192107e2bec0 150 SMART SM00530 8 65 0.008 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS14805 b0151b7560bb2cfb6227192107e2bec0 150 SUPERFAMILY SSF47413 3 53 5.35E-8 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS14805 b0151b7560bb2cfb6227192107e2bec0 150 Pfam PF01381 Helix-turn-helix 9 51 6.8E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS14805 b0151b7560bb2cfb6227192107e2bec0 150 Gene3D G3DSA:1.10.260.40 3 52 2.6E-8 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS15150 dee5d3aef0a1446b2ec010e8eb0d9ad1 169 SUPERFAMILY SSF55729 21 158 4.15E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15150 dee5d3aef0a1446b2ec010e8eb0d9ad1 169 Gene3D G3DSA:3.40.630.30 24 167 2.2E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15150 dee5d3aef0a1446b2ec010e8eb0d9ad1 169 Pfam PF13302 Acetyltransferase (GNAT) domain 22 151 2.4E-17 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 Pfam PF05199 GMC oxidoreductase 479 607 1.6E-14 T 11-11-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 Pfam PF13450 NAD(P)-binding Rossmann-like domain 29 57 1.1E-5 T 11-11-2016 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 Gene3D G3DSA:3.50.50.60 23 176 7.3E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 Gene3D G3DSA:3.50.50.60 501 502 7.3E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 Gene3D G3DSA:3.50.50.60 278 383 7.3E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 Gene3D G3DSA:3.50.50.60 550 617 7.3E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 Pfam PF00732 GMC oxidoreductase 268 382 2.1E-5 T 11-11-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 SUPERFAMILY SSF51905 272 381 5.18E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 SUPERFAMILY SSF51905 556 621 5.18E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14050 66a97cdb99846484f47450c7bbbd55ee 640 SUPERFAMILY SSF51905 24 219 5.18E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS04465 3b22d289e2412f51c97b4916cd327b17 212 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 6 209 1.5E-73 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 S40542_RS04465 3b22d289e2412f51c97b4916cd327b17 212 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 134 149 - T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 S40542_RS04465 3b22d289e2412f51c97b4916cd327b17 212 SUPERFAMILY SSF53335 16 207 2.27E-35 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS04465 3b22d289e2412f51c97b4916cd327b17 212 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 4 212 35.197 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 S40542_RS04465 3b22d289e2412f51c97b4916cd327b17 212 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 208 3.9E-65 T 11-11-2016 S40542_RS04465 3b22d289e2412f51c97b4916cd327b17 212 Gene3D G3DSA:3.40.50.150 15 208 2.5E-53 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS12555 a5a53b0e518e538e6adc0a3fe03e29e8 339 Pfam PF12833 Helix-turn-helix domain 256 336 4.6E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS12555 a5a53b0e518e538e6adc0a3fe03e29e8 339 SMART SM00342 250 335 2.8E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS12555 a5a53b0e518e538e6adc0a3fe03e29e8 339 Gene3D G3DSA:1.10.10.60 286 337 4.2E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS12555 a5a53b0e518e538e6adc0a3fe03e29e8 339 SUPERFAMILY SSF46689 287 338 1.03E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS12555 a5a53b0e518e538e6adc0a3fe03e29e8 339 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 287 331 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS12555 a5a53b0e518e538e6adc0a3fe03e29e8 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 319 335 9.4E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS12555 a5a53b0e518e538e6adc0a3fe03e29e8 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 319 9.4E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 Gene3D G3DSA:2.170.230.10 154 243 1.7E-21 T 11-11-2016 IPR019766 Peptidase S26A, all-beta subdomain S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 11-11-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 Gene3D G3DSA:2.10.109.10 244 285 8.8E-53 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 Gene3D G3DSA:2.10.109.10 76 153 8.8E-53 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 244 263 4.2E-24 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.2E-24 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.2E-24 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 11-11-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 SUPERFAMILY SSF51306 78 309 2.62E-69 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 285 1.6E-44 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 S40542_RS15605 9e8cc7cf5f0a01544ae2eb09ba102c44 311 Pfam PF00717 Peptidase S24-like 86 165 2.0E-20 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 PRINTS PR00601 Bacterioferritin signature 44 64 1.7E-44 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 PRINTS PR00601 Bacterioferritin signature 107 127 1.7E-44 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 PRINTS PR00601 Bacterioferritin signature 23 43 1.7E-44 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 PRINTS PR00601 Bacterioferritin signature 86 106 1.7E-44 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 PRINTS PR00601 Bacterioferritin signature 65 85 1.7E-44 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 PRINTS PR00601 Bacterioferritin signature 3 22 1.7E-44 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 PRINTS PR00601 Bacterioferritin signature 129 150 1.7E-44 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 Pfam PF00210 Ferritin-like domain 8 144 6.2E-37 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 Gene3D G3DSA:1.20.1260.10 1 157 2.1E-55 T 11-11-2016 IPR012347 Ferritin-related S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 1.1E-47 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 PIRSF PIRSF002560 1 158 1.3E-57 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08220 c1128e0a0d4e97e88d70a345200964b0 163 SUPERFAMILY SSF47240 1 157 5.86E-49 T 11-11-2016 IPR009078 Ferritin-like superfamily S40542_RS03585 1382a2923c98bf6eac57992e34010185 354 SUPERFAMILY SSF51569 3 329 1.47E-106 T 11-11-2016 S40542_RS03585 1382a2923c98bf6eac57992e34010185 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.0E-194 T 11-11-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 S40542_RS03585 1382a2923c98bf6eac57992e34010185 354 Gene3D G3DSA:3.20.20.70 1 335 2.5E-109 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS03585 1382a2923c98bf6eac57992e34010185 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 3.2E-93 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 S40542_RS03585 1382a2923c98bf6eac57992e34010185 354 PIRSF PIRSF001359 1 329 8.4E-82 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 S40542_RS03585 1382a2923c98bf6eac57992e34010185 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.2E-95 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 S40542_RS03585 1382a2923c98bf6eac57992e34010185 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 3.1E-21 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 Pfam PF01316 Arginine repressor, DNA binding domain 6 73 6.1E-23 T 11-11-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 149 1.0E-41 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 Gene3D G3DSA:1.10.10.10 2 77 1.8E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 130 2.0E-16 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 Gene3D G3DSA:3.30.1360.40 80 154 2.9E-25 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 Hamap MF_00173 Arginine repressor [argR]. 1 155 57.861 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 PRINTS PR01467 Bacterial arginine repressor signature 25 38 9.8E-24 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 PRINTS PR01467 Bacterial arginine repressor signature 90 103 9.8E-24 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 PRINTS PR01467 Bacterial arginine repressor signature 121 136 9.8E-24 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 PRINTS PR01467 Bacterial arginine repressor signature 42 57 9.8E-24 T 11-11-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 SUPERFAMILY SSF55252 82 149 2.49E-18 T 11-11-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 S40542_RS04860 3952d5e7bda7b70af249b71216bcc9dc 155 SUPERFAMILY SSF46785 4 76 1.63E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 Gene3D G3DSA:1.20.200.10 120 389 4.0E-88 T 11-11-2016 S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 Gene3D G3DSA:1.10.275.10 1 119 3.0E-51 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 SUPERFAMILY SSF48557 4 448 2.04E-109 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 Gene3D G3DSA:1.10.40.30 390 445 2.4E-31 T 11-11-2016 S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 Pfam PF00206 Lyase 14 312 4.6E-72 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 3.5E-17 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 3.5E-17 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.5E-17 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.5E-17 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.1E-144 T 11-11-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS09355 de379147cce1ab7bd3568af02ac1ca18 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 9.0E-51 T 11-11-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 S40542_RS04880 76a257f1b2841054d84dfdcbe80b90d3 206 SUPERFAMILY SSF100950 15 205 1.26E-50 T 11-11-2016 S40542_RS04880 76a257f1b2841054d84dfdcbe80b90d3 206 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 16 199 2.7E-42 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase S40542_RS04880 76a257f1b2841054d84dfdcbe80b90d3 206 Gene3D G3DSA:3.40.50.10420 15 205 5.4E-52 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain S40542_RS04880 76a257f1b2841054d84dfdcbe80b90d3 206 PIRSF PIRSF006806 9 202 6.6E-37 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase S40542_RS04880 76a257f1b2841054d84dfdcbe80b90d3 206 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 15 199 6.9E-48 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase S40542_RS12300 234ab463b2ea16fb974b5eb9ebd86084 249 Pfam PF02405 Permease MlaE 31 241 4.9E-56 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 SUPERFAMILY SSF51395 2 353 4.4E-106 T 11-11-2016 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 Gene3D G3DSA:3.50.50.60 356 460 2.6E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 Gene3D G3DSA:3.50.50.60 466 607 4.2E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 600 616 8.8E-11 T 11-11-2016 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 373 392 8.8E-11 T 11-11-2016 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 493 511 8.8E-11 T 11-11-2016 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 Gene3D G3DSA:3.20.20.70 2 355 2.3E-115 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 326 1.0E-72 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 SUPERFAMILY SSF51971 329 512 2.59E-33 T 11-11-2016 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 493 501 3.3E-6 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 372 394 3.3E-6 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 579 595 3.3E-6 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 371 620 1.9E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10880 35851869867cf93b0098c184bcec827a 653 SUPERFAMILY SSF51905 464 609 3.02E-13 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS14140 1858565029e04a325922340004791378 623 Gene3D G3DSA:2.170.130.10 20 140 8.8E-18 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS14140 1858565029e04a325922340004791378 623 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 140 5.9E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS14140 1858565029e04a325922340004791378 623 Gene3D G3DSA:2.40.170.20 141 623 1.8E-50 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS14140 1858565029e04a325922340004791378 623 Pfam PF00593 TonB dependent receptor 388 620 3.7E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS14140 1858565029e04a325922340004791378 623 SUPERFAMILY SSF56935 57 623 3.66E-67 T 11-11-2016 S40542_RS03380 2ea4e18960570af6e3d7bf61b0347790 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-27 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS03380 2ea4e18960570af6e3d7bf61b0347790 91 SMART SM01409 8 61 4.7E-16 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 S40542_RS03380 2ea4e18960570af6e3d7bf61b0347790 91 Pfam PF01192 RNA polymerase Rpb6 10 60 8.5E-17 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 S40542_RS03380 2ea4e18960570af6e3d7bf61b0347790 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.197 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 S40542_RS03380 2ea4e18960570af6e3d7bf61b0347790 91 SUPERFAMILY SSF63562 1 78 5.36E-25 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 S40542_RS03380 2ea4e18960570af6e3d7bf61b0347790 91 Gene3D G3DSA:3.90.940.10 1 78 1.8E-16 T 11-11-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 Pfam PF00288 GHMP kinases N terminal domain 87 143 2.1E-8 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 Gene3D G3DSA:3.30.70.890 161 276 1.2E-39 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 SUPERFAMILY SSF55060 159 272 2.97E-34 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 276 1.4E-88 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 Pfam PF08544 GHMP kinases C terminal 204 258 8.7E-8 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 Gene3D G3DSA:3.30.230.10 5 158 2.6E-52 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 SUPERFAMILY SSF54211 4 157 2.2E-45 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 269 33.235 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 S40542_RS17685 93ac005f2e1656c0d2f1f7eee6f3c03f 284 PIRSF PIRSF010376 2 277 2.0E-85 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 S40542_RS00145 d2d974f3efc8f3c7cc35f80165627cbf 79 Gene3D G3DSA:3.30.160.140 1 77 3.2E-17 T 11-11-2016 IPR009962 Protein of unknown function DUF1488 S40542_RS00145 d2d974f3efc8f3c7cc35f80165627cbf 79 Pfam PF07369 Protein of unknown function (DUF1488) 5 76 1.1E-11 T 11-11-2016 IPR009962 Protein of unknown function DUF1488 S40542_RS00145 d2d974f3efc8f3c7cc35f80165627cbf 79 SUPERFAMILY SSF160272 1 77 1.44E-18 T 11-11-2016 IPR009962 Protein of unknown function DUF1488 S40542_RS14390 989aa72a43b1643283e47ebf45f442ec 517 Gene3D G3DSA:2.10.10.20 395 439 1.9E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS14390 989aa72a43b1643283e47ebf45f442ec 517 SUPERFAMILY SSF88713 94 380 3.89E-21 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 S40542_RS14390 989aa72a43b1643283e47ebf45f442ec 517 SUPERFAMILY SSF51055 385 439 3.73E-10 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS14390 989aa72a43b1643283e47ebf45f442ec 517 Gene3D G3DSA:3.20.20.370 100 379 6.1E-15 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 S40542_RS14390 989aa72a43b1643283e47ebf45f442ec 517 SMART SM00495 394 439 1.4E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS14390 989aa72a43b1643283e47ebf45f442ec 517 Pfam PF02839 Carbohydrate binding domain 395 436 1.3E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS11320 e54b6a6e384b70dba6544146c7d85c2d 181 SUPERFAMILY SSF81342 4 177 2.9E-38 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 S40542_RS11320 e54b6a6e384b70dba6544146c7d85c2d 181 Pfam PF01292 Prokaryotic cytochrome b561 9 177 6.3E-33 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 S40542_RS11320 e54b6a6e384b70dba6544146c7d85c2d 181 Gene3D G3DSA:1.20.950.20 87 170 1.6E-6 T 11-11-2016 S40542_RS11320 e54b6a6e384b70dba6544146c7d85c2d 181 Gene3D G3DSA:1.20.950.20 4 70 2.8E-4 T 11-11-2016 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 456 74.252 T 11-11-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 Gene3D G3DSA:1.20.200.10 133 411 1.1E-83 T 11-11-2016 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 Pfam PF10415 Fumarase C C-terminus 402 454 6.4E-21 T 11-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 2.1E-5 T 11-11-2016 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 2.1E-5 T 11-11-2016 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 2.1E-5 T 11-11-2016 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 SUPERFAMILY SSF48557 4 454 1.88E-136 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 Pfam PF00206 Lyase 12 336 6.0E-89 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 Gene3D G3DSA:1.10.275.10 3 132 1.0E-51 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 1.5E-29 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 1.5E-29 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 1.5E-29 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 1.5E-29 T 11-11-2016 IPR000362 Fumarate lyase family S40542_RS20345 e1b70ecd5e6ef1894f0da1034576d98f 458 Gene3D G3DSA:1.10.40.30 412 457 1.4E-21 T 11-11-2016 S40542_RS05700 b258c802ae4117c09d6a55d801e0f9a8 281 SUPERFAMILY SSF109604 12 277 1.97E-54 T 11-11-2016 S40542_RS05700 b258c802ae4117c09d6a55d801e0f9a8 281 Gene3D G3DSA:1.10.3150.10 9 277 8.6E-60 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS05700 b258c802ae4117c09d6a55d801e0f9a8 281 Pfam PF08668 HDOD domain 18 213 8.5E-45 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS16095 480affd0a4ec9acfb6e314892058e7dd 199 Pfam PF07445 Primosomal replication protein priC 6 194 6.6E-41 T 11-11-2016 IPR010890 Primosomal replication PriB/PriC S40542_RS05000 92abc0b1fbdd83d821279323003a1f33 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 35.277 T 11-11-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 S40542_RS05000 92abc0b1fbdd83d821279323003a1f33 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 194 8.3E-58 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 S40542_RS05000 92abc0b1fbdd83d821279323003a1f33 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 1.3E-95 T 11-11-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 S40542_RS05000 92abc0b1fbdd83d821279323003a1f33 210 PIRSF PIRSF006102 3 210 1.7E-64 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 S40542_RS04835 dc5178aa2e754517ce923c48c21fa984 224 SMART SM01144 26 218 9.2E-65 T 11-11-2016 IPR005636 DTW S40542_RS04835 dc5178aa2e754517ce923c48c21fa984 224 Pfam PF03942 DTW domain 29 208 1.6E-41 T 11-11-2016 IPR005636 DTW S40542_RS02170 2c570b5d71ed2646c5e45f2accbaa937 236 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 38 46 - T 11-11-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS02170 2c570b5d71ed2646c5e45f2accbaa937 236 Gene3D G3DSA:3.40.50.1860 1 106 3.0E-28 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS02170 2c570b5d71ed2646c5e45f2accbaa937 236 SUPERFAMILY SSF53681 76 197 2.4E-25 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS02170 2c570b5d71ed2646c5e45f2accbaa937 236 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 148 158 - T 11-11-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS02170 2c570b5d71ed2646c5e45f2accbaa937 236 Pfam PF01177 Asp/Glu/Hydantoin racemase 22 182 1.2E-22 T 11-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS02170 2c570b5d71ed2646c5e45f2accbaa937 236 TIGRFAM TIGR00067 glut_race: glutamate racemase 2 191 2.2E-47 T 11-11-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS02170 2c570b5d71ed2646c5e45f2accbaa937 236 SUPERFAMILY SSF53681 2 73 3.79E-17 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 Gene3D G3DSA:3.90.960.10 251 390 4.1E-33 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 2.1E-245 T 11-11-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 Pfam PF03129 Anticodon binding domain 477 570 2.1E-22 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 Gene3D G3DSA:3.40.50.800 475 572 4.5E-32 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 SUPERFAMILY SSF55826 218 392 2.62E-33 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.1E-18 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.1E-18 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.1E-18 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.1E-18 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 SUPERFAMILY SSF55681 409 480 7.74E-102 T 11-11-2016 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 SUPERFAMILY SSF55681 10 237 7.74E-102 T 11-11-2016 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 PIRSF PIRSF001535 1 573 7.6E-266 T 11-11-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 Gene3D G3DSA:3.30.930.10 12 234 1.6E-106 T 11-11-2016 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 Gene3D G3DSA:3.30.930.10 391 474 1.6E-106 T 11-11-2016 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 SUPERFAMILY SSF52954 465 572 3.32E-32 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 41.656 T 11-11-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 Pfam PF04073 Aminoacyl-tRNA editing domain 257 380 3.2E-25 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 S40542_RS07135 08394df43f549c32424e0ac88adf524e 573 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 461 6.6E-43 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 Gene3D G3DSA:1.20.58.410 6 95 3.9E-25 T 11-11-2016 S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 SUPERFAMILY SSF75620 12 355 1.07E-137 T 11-11-2016 S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.437 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 357 1.5E-172 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 SMART SM00937 67 180 9.1E-70 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 Gene3D G3DSA:3.30.160.20 215 290 3.8E-36 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 Pfam PF00472 RF-1 domain 215 323 1.1E-42 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 S40542_RS17670 632dba01dc773206ba5d71d5224c6d72 361 Pfam PF03462 PCRF domain 13 205 9.3E-77 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 SUPERFAMILY SSF55973 111 232 6.28E-52 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 Gene3D G3DSA:3.30.300.10 133 233 3.6E-43 T 11-11-2016 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 SUPERFAMILY SSF55973 3 110 6.28E-48 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 2.8E-195 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 PIRSF PIRSF000497 1 382 2.6E-174 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.565 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.7E-43 T 11-11-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 2.6E-69 T 11-11-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 SUPERFAMILY SSF55973 233 381 1.14E-70 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 Gene3D G3DSA:3.30.300.10 11 132 3.6E-50 T 11-11-2016 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 Gene3D G3DSA:3.30.300.10 244 381 2.3E-71 T 11-11-2016 S40542_RS05705 9d6fb9cb4eeeb32d74ae298c211464ef 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 9.9E-45 T 11-11-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 Gene3D G3DSA:1.10.287.110 229 290 4.9E-15 T 11-11-2016 IPR001623 DnaJ domain S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 SUPERFAMILY SSF158682 52 187 3.92E-22 T 11-11-2016 IPR029024 TerB-like S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 SUPERFAMILY SSF158682 3 19 3.92E-22 T 11-11-2016 IPR029024 TerB-like S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 Gene3D G3DSA:1.10.3680.10 18 184 1.8E-22 T 11-11-2016 IPR029024 TerB-like S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 SMART SM00271 228 290 1.4E-14 T 11-11-2016 IPR001623 DnaJ domain S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 Pfam PF05099 Tellurite resistance protein TerB 54 174 7.1E-15 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 SUPERFAMILY SSF46565 137 290 4.19E-28 T 11-11-2016 IPR001623 DnaJ domain S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 PRINTS PR00625 DnaJ domain signature 273 290 7.7E-10 T 11-11-2016 IPR001623 DnaJ domain S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 PRINTS PR00625 DnaJ domain signature 249 264 7.7E-10 T 11-11-2016 IPR001623 DnaJ domain S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 PRINTS PR00625 DnaJ domain signature 231 249 7.7E-10 T 11-11-2016 IPR001623 DnaJ domain S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 Pfam PF00226 DnaJ domain 232 290 3.7E-12 T 11-11-2016 IPR001623 DnaJ domain S40542_RS05760 6615c94d366e8cbd73ba9bbfe92021f3 290 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 1 290 33.209 T 11-11-2016 IPR023749 Co-chaperone DjlA GO:0051087 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 SUPERFAMILY SSF56655 1 261 1.03E-86 T 11-11-2016 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 11-11-2016 IPR020583 Inositol monophosphatase, metal-binding site S40542_RS04180 30060904ea53710b9699bd552ead3031 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 11-11-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.5E-58 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.5E-58 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.5E-58 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.5E-58 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.5E-58 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.5E-58 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 Gene3D G3DSA:3.40.190.80 158 258 6.5E-38 T 11-11-2016 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 Gene3D G3DSA:3.30.540.10 2 157 9.4E-54 T 11-11-2016 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 5.7E-33 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 5.7E-33 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 5.7E-33 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 5.7E-33 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 S40542_RS04180 30060904ea53710b9699bd552ead3031 267 Pfam PF00459 Inositol monophosphatase family 2 258 6.6E-72 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS19195 dda5bcd800ac40b49dec0c9ede662908 359 Gene3D G3DSA:3.10.580.10 181 319 2.4E-18 T 11-11-2016 S40542_RS19195 dda5bcd800ac40b49dec0c9ede662908 359 SMART SM00116 266 314 1.0E-4 T 11-11-2016 IPR000644 CBS domain S40542_RS19195 dda5bcd800ac40b49dec0c9ede662908 359 SUPERFAMILY SSF54631 183 315 1.77E-25 T 11-11-2016 S40542_RS19195 dda5bcd800ac40b49dec0c9ede662908 359 Pfam PF01595 Domain of unknown function DUF21 9 179 2.4E-31 T 11-11-2016 IPR002550 Domain of unknown function DUF21 S40542_RS19195 dda5bcd800ac40b49dec0c9ede662908 359 Pfam PF00571 CBS domain 265 314 9.8E-7 T 11-11-2016 IPR000644 CBS domain S40542_RS18580 0c978f9a1433d1ecf8cdb850f94e1938 746 Pfam PF13614 AAA domain 553 680 1.2E-15 T 11-11-2016 IPR025669 AAA domain S40542_RS18580 0c978f9a1433d1ecf8cdb850f94e1938 746 Pfam PF02706 Chain length determinant protein 22 274 1.1E-30 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 S40542_RS18580 0c978f9a1433d1ecf8cdb850f94e1938 746 Gene3D G3DSA:3.40.50.300 547 736 1.3E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18580 0c978f9a1433d1ecf8cdb850f94e1938 746 SUPERFAMILY SSF52540 547 742 1.32E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18580 0c978f9a1433d1ecf8cdb850f94e1938 746 Pfam PF13807 G-rich domain on putative tyrosine kinase 391 472 6.1E-31 T 11-11-2016 IPR032807 Tyrosine kinase, G-rich domain S40542_RS18580 0c978f9a1433d1ecf8cdb850f94e1938 746 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 533 737 4.5E-54 T 11-11-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 S40542_RS02690 6577cd0a804f40d0e9d2d7ef9c711b3c 393 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 12 381 5.5E-159 T 11-11-2016 IPR017510 Release factor H-coupled RctB family protein S40542_RS02690 6577cd0a804f40d0e9d2d7ef9c711b3c 393 Pfam PF01139 tRNA-splicing ligase RtcB 130 386 6.2E-60 T 11-11-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 S40542_RS02690 6577cd0a804f40d0e9d2d7ef9c711b3c 393 Pfam PF01139 tRNA-splicing ligase RtcB 30 101 3.6E-11 T 11-11-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 S40542_RS02690 6577cd0a804f40d0e9d2d7ef9c711b3c 393 SUPERFAMILY SSF103365 14 386 5.23E-99 T 11-11-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 SUPERFAMILY SSF158682 247 300 7.32E-6 T 11-11-2016 IPR029024 TerB-like S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 Gene3D G3DSA:1.10.287.70 24 245 9.7E-55 T 11-11-2016 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 SUPERFAMILY SSF81324 19 246 8.57E-53 T 11-11-2016 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 Pfam PF00520 Ion transport protein 25 250 2.7E-32 T 11-11-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 PRINTS PR00169 Potassium channel signature 17 45 6.5E-31 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 PRINTS PR00169 Potassium channel signature 59 82 6.5E-31 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 PRINTS PR00169 Potassium channel signature 130 156 6.5E-31 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 PRINTS PR00169 Potassium channel signature 159 182 6.5E-31 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 PRINTS PR00169 Potassium channel signature 219 245 6.5E-31 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 S40542_RS05375 bf4311cfde7d9de7c80e847b8166bf45 315 PRINTS PR00169 Potassium channel signature 190 212 6.5E-31 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 SMART SM00411 1 91 2.5E-42 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.0E-30 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.5E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.5E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.5E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 7.8E-48 T 11-11-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 SUPERFAMILY SSF47729 1 91 8.24E-31 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.021 T 11-11-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 S40542_RS09500 0be3f7b0276f68d35cb13a9cb50c1970 96 Gene3D G3DSA:4.10.520.10 1 91 9.0E-35 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 S40542_RS03255 ac0519ec5912f35eb055f1ee1b804bd8 241 SMART SM00862 156 232 4.3E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS03255 ac0519ec5912f35eb055f1ee1b804bd8 241 SMART SM00448 4 115 7.7E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03255 ac0519ec5912f35eb055f1ee1b804bd8 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.9E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS03255 ac0519ec5912f35eb055f1ee1b804bd8 241 SUPERFAMILY SSF46894 133 233 1.11E-22 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS03255 ac0519ec5912f35eb055f1ee1b804bd8 241 Pfam PF00072 Response regulator receiver domain 6 115 1.9E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03255 ac0519ec5912f35eb055f1ee1b804bd8 241 Gene3D G3DSA:1.10.10.10 133 234 2.1E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03255 ac0519ec5912f35eb055f1ee1b804bd8 241 Gene3D G3DSA:3.40.50.2300 3 127 1.5E-32 T 11-11-2016 S40542_RS03255 ac0519ec5912f35eb055f1ee1b804bd8 241 SUPERFAMILY SSF52172 2 127 2.13E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS05510 a613f56ae67e80dec120acb2630d9918 256 SUPERFAMILY SSF53850 27 194 4.34E-14 T 11-11-2016 S40542_RS05510 a613f56ae67e80dec120acb2630d9918 256 Gene3D G3DSA:3.40.190.10 6 86 2.5E-7 T 11-11-2016 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 SUPERFAMILY SSF56014 433 569 2.88E-32 T 11-11-2016 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 13 574 56.97 T 11-11-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 481 497 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 PRINTS PR00397 Sirohaem Fe-binding site signature 433 451 3.3E-8 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 PRINTS PR00397 Sirohaem Fe-binding site signature 481 499 3.3E-8 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 22 562 1.4E-269 T 11-11-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 176 334 4.7E-43 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 434 561 0.0067 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 SUPERFAMILY SSF55124 349 425 8.78E-21 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 82 137 1.7E-13 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 356 420 1.1E-13 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 SUPERFAMILY SSF56014 152 347 1.23E-57 T 11-11-2016 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 SUPERFAMILY SSF55124 15 148 6.21E-26 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Gene3D G3DSA:3.30.413.10 434 561 4.5E-32 T 11-11-2016 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Gene3D G3DSA:3.30.413.10 152 343 1.2E-68 T 11-11-2016 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Gene3D G3DSA:3.90.480.10 77 149 4.5E-60 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS19690 84ce6106baffc38a1f6ffd31e6919f63 574 Gene3D G3DSA:3.90.480.10 345 426 4.5E-60 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 S40542_RS06110 c8480408236fc8e524bdf83c6003ec4d 226 Pfam PF02107 Flagellar L-ring protein 46 224 4.7E-60 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 S40542_RS06110 c8480408236fc8e524bdf83c6003ec4d 226 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 223 26.801 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 S40542_RS06110 c8480408236fc8e524bdf83c6003ec4d 226 PRINTS PR01008 Flagellar L-ring protein signature 202 216 1.9E-24 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 S40542_RS06110 c8480408236fc8e524bdf83c6003ec4d 226 PRINTS PR01008 Flagellar L-ring protein signature 66 78 1.9E-24 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 S40542_RS06110 c8480408236fc8e524bdf83c6003ec4d 226 PRINTS PR01008 Flagellar L-ring protein signature 139 154 1.9E-24 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 S40542_RS06110 c8480408236fc8e524bdf83c6003ec4d 226 PRINTS PR01008 Flagellar L-ring protein signature 186 200 1.9E-24 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 S40542_RS06110 c8480408236fc8e524bdf83c6003ec4d 226 PRINTS PR01008 Flagellar L-ring protein signature 165 181 1.9E-24 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 S40542_RS14060 3fd067a0f843408787a95b406ced3751 276 Gene3D G3DSA:3.60.15.10 32 237 7.9E-24 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS14060 3fd067a0f843408787a95b406ced3751 276 SUPERFAMILY SSF56281 30 237 1.68E-26 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS14060 3fd067a0f843408787a95b406ced3751 276 SMART SM00849 34 213 1.5E-4 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS11790 598c5bca44dfef4a26289819baa40589 346 SUPERFAMILY SSF53098 160 334 1.9E-37 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS11790 598c5bca44dfef4a26289819baa40589 346 SUPERFAMILY SSF46689 19 114 9.32E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS11790 598c5bca44dfef4a26289819baa40589 346 Gene3D G3DSA:3.30.420.10 159 319 8.5E-24 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS11790 598c5bca44dfef4a26289819baa40589 346 Pfam PF00665 Integrase core domain 161 283 2.0E-20 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 S40542_RS11790 598c5bca44dfef4a26289819baa40589 346 Pfam PF13551 Winged helix-turn helix 11 74 1.9E-20 T 11-11-2016 S40542_RS08810 42fcd628f36ddb738b1f2f449badfef3 313 Pfam PF01882 Protein of unknown function DUF58 60 144 2.9E-20 T 11-11-2016 IPR002881 Domain of unknown function DUF58 S40542_RS08810 42fcd628f36ddb738b1f2f449badfef3 313 SUPERFAMILY SSF53300 96 217 6.89E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS17120 c1a51c048ff0bf7176704d2a34ce535f 576 Pfam PF13646 HEAT repeats 421 505 2.3E-7 T 11-11-2016 S40542_RS17120 c1a51c048ff0bf7176704d2a34ce535f 576 Gene3D G3DSA:1.25.10.10 387 569 2.0E-11 T 11-11-2016 IPR011989 Armadillo-like helical S40542_RS17120 c1a51c048ff0bf7176704d2a34ce535f 576 SUPERFAMILY SSF48371 332 566 2.78E-11 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 32.354 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 SUPERFAMILY SSF47781 66 137 1.11E-22 T 11-11-2016 IPR010994 RuvA domain 2-like S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 Pfam PF07499 RuvA, C-terminal domain 162 205 8.5E-17 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 Gene3D G3DSA:2.40.50.140 1 66 1.8E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 Gene3D G3DSA:1.10.150.20 68 138 5.8E-32 T 11-11-2016 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.7E-17 T 11-11-2016 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 Pfam PF01330 RuvA N terminal domain 1 62 6.7E-21 T 11-11-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 SMART SM00278 108 127 0.023 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 SMART SM00278 73 92 1.9 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 SUPERFAMILY SSF50249 1 63 1.6E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 SUPERFAMILY SSF46929 162 205 5.49E-11 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 6.8E-67 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 S40542_RS14685 65674d0d6ffcfecad9ff34440ad8b660 205 Gene3D G3DSA:1.10.8.10 161 205 3.0E-19 T 11-11-2016 S40542_RS14460 a6576c64bfa3ec77c60d11365219e8d1 442 SUPERFAMILY SSF53955 265 394 9.38E-30 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS14460 a6576c64bfa3ec77c60d11365219e8d1 442 SUPERFAMILY SSF53955 423 441 9.38E-30 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS14460 a6576c64bfa3ec77c60d11365219e8d1 442 Pfam PF01464 Transglycosylase SLT domain 275 401 8.2E-24 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 S40542_RS14460 a6576c64bfa3ec77c60d11365219e8d1 442 Pfam PF11873 Domain of unknown function (DUF3393) 37 118 7.4E-8 T 11-11-2016 IPR024570 Murein transglycosylase-C, N-terminal S40542_RS14460 a6576c64bfa3ec77c60d11365219e8d1 442 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 293 321 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 S40542_RS14460 a6576c64bfa3ec77c60d11365219e8d1 442 Gene3D G3DSA:1.10.530.10 267 441 2.3E-34 T 11-11-2016 S40542_RS12110 5f5632a800e19ca1940827c25ec00dbd 208 Gene3D G3DSA:2.60.40.670 24 73 8.9E-17 T 11-11-2016 IPR000601 PKD domain S40542_RS12110 5f5632a800e19ca1940827c25ec00dbd 208 Gene3D G3DSA:2.60.40.670 93 163 1.1E-6 T 11-11-2016 IPR000601 PKD domain S40542_RS12110 5f5632a800e19ca1940827c25ec00dbd 208 SUPERFAMILY SSF49299 24 75 2.62E-16 T 11-11-2016 IPR000601 PKD domain S40542_RS12110 5f5632a800e19ca1940827c25ec00dbd 208 Pfam PF00801 PKD domain 22 61 3.9E-11 T 11-11-2016 IPR000601 PKD domain S40542_RS12110 5f5632a800e19ca1940827c25ec00dbd 208 SMART SM00089 82 162 0.35 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS12110 5f5632a800e19ca1940827c25ec00dbd 208 SMART SM00089 7 77 1.1E-5 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS12110 5f5632a800e19ca1940827c25ec00dbd 208 SUPERFAMILY SSF49299 89 161 1.7E-6 T 11-11-2016 IPR000601 PKD domain S40542_RS11670 f990d456ef863df4249aafe035a8b5bf 117 Gene3D G3DSA:3.40.1260.10 3 116 5.6E-20 T 11-11-2016 IPR027396 DsrEFH-like S40542_RS11670 f990d456ef863df4249aafe035a8b5bf 117 SUPERFAMILY SSF75169 4 116 2.22E-20 T 11-11-2016 IPR027396 DsrEFH-like S40542_RS11670 f990d456ef863df4249aafe035a8b5bf 117 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 116 1.2E-29 T 11-11-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 S40542_RS11670 f990d456ef863df4249aafe035a8b5bf 117 Pfam PF02635 DsrE/DsrF-like family 5 116 1.3E-15 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein S40542_RS15415 eeb88b80263171cb0f8c8733c48131ff 247 ProSitePatterns PS00171 Triosephosphate isomerase active site. 161 171 - T 11-11-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS15415 eeb88b80263171cb0f8c8733c48131ff 247 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 236 2.0E-61 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS15415 eeb88b80263171cb0f8c8733c48131ff 247 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 245 37.358 T 11-11-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS15415 eeb88b80263171cb0f8c8733c48131ff 247 Gene3D G3DSA:3.20.20.70 4 245 3.0E-91 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS15415 eeb88b80263171cb0f8c8733c48131ff 247 Pfam PF00121 Triosephosphate isomerase 7 242 2.0E-83 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS15415 eeb88b80263171cb0f8c8733c48131ff 247 SUPERFAMILY SSF51351 3 244 1.03E-80 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 SMART SM00331 163 376 2.4E-10 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 Pfam PF13581 Histidine kinase-like ATPase domain 411 545 2.2E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 Gene3D G3DSA:3.40.50.2300 3 151 1.7E-39 T 11-11-2016 S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 374 1.1E-31 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 Gene3D G3DSA:3.30.565.10 424 510 4.6E-4 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 SUPERFAMILY SSF52172 3 143 1.18E-40 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 Gene3D G3DSA:3.60.40.10 293 375 3.7E-4 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 SMART SM00448 1 114 8.6E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 Pfam PF00072 Response regulator receiver domain 3 114 7.7E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15765 2c0de1a565ea02ff37a4c91d61686292 549 SUPERFAMILY SSF81606 171 374 2.35E-9 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 S40542_RS00545 bd15a467e188ced624b3d47f8ebd2aa5 180 SUPERFAMILY SSF51182 1 179 2.85E-36 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS00545 bd15a467e188ced624b3d47f8ebd2aa5 180 Gene3D G3DSA:2.60.120.10 5 177 4.0E-52 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS00545 bd15a467e188ced624b3d47f8ebd2aa5 180 Pfam PF03079 ARD/ARD' family 5 165 3.5E-35 T 11-11-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 S40542_RS00545 bd15a467e188ced624b3d47f8ebd2aa5 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 36.643 T 11-11-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 S40542_RS01515 52a9003de8a24e0ac0e62ca67637d1e0 217 Gene3D G3DSA:3.40.50.880 1 216 2.5E-93 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS01515 52a9003de8a24e0ac0e62ca67637d1e0 217 PIRSF PIRSF006320 1 216 2.6E-99 T 11-11-2016 IPR026041 Glyoxalase ElbB S40542_RS01515 52a9003de8a24e0ac0e62ca67637d1e0 217 SUPERFAMILY SSF52317 1 209 2.75E-54 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 SUPERFAMILY SSF53098 320 505 7.12E-57 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Gene3D G3DSA:3.30.420.10 316 529 2.5E-85 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Gene3D G3DSA:1.10.150.20 187 253 5.1E-26 T 11-11-2016 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 687 710 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 642 664 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 778 789 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 863 876 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 717 730 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 800 811 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 665 680 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 741 766 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 PRINTS PR00868 DNA-polymerase family A (pol I) signature 832 848 9.6E-81 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 SMART SM00482 673 880 7.1E-119 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Gene3D G3DSA:3.30.70.370 806 916 5.6E-68 T 11-11-2016 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Gene3D G3DSA:3.30.70.370 651 698 5.6E-68 T 11-11-2016 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 SUPERFAMILY SSF88723 7 170 1.5E-57 T 11-11-2016 IPR029060 PIN domain-like S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 SMART SM00474 317 504 1.7E-43 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Gene3D G3DSA:1.10.150.20 699 805 3.8E-37 T 11-11-2016 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Pfam PF01612 3'-5' exonuclease 317 504 2.0E-40 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 SUPERFAMILY SSF56672 509 916 1.56E-157 T 11-11-2016 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 ProSitePatterns PS00447 DNA polymerase family A signature. 741 760 - T 11-11-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 SMART SM00475 7 268 1.5E-125 T 11-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.5E-56 T 11-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 TIGRFAM TIGR00593 pola: DNA polymerase I 9 916 1.6E-288 T 11-11-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 SMART SM00279 173 208 9.1E-12 T 11-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 SUPERFAMILY SSF47807 171 290 1.5E-29 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Gene3D G3DSA:1.20.1060.10 530 650 1.6E-38 T 11-11-2016 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 272 7.5E-29 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Gene3D G3DSA:3.40.50.1010 8 186 1.5E-73 T 11-11-2016 IPR029060 PIN domain-like S40542_RS01520 98f3e9c940e79a7a1833fb2bae347eb7 916 Pfam PF00476 DNA polymerase family A 538 913 3.7E-158 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS18080 17240212ee3ccbaf599b71c618938c11 166 Gene3D G3DSA:3.10.490.10 3 156 4.9E-36 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like S40542_RS18080 17240212ee3ccbaf599b71c618938c11 166 Pfam PF13772 AIG2-like family 64 142 3.8E-12 T 11-11-2016 S40542_RS18080 17240212ee3ccbaf599b71c618938c11 166 SUPERFAMILY SSF110857 7 128 2.09E-19 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like S40542_RS02000 fb9f77c23ac71a2ba0f57eb9705ba894 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 3.2E-12 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS02000 fb9f77c23ac71a2ba0f57eb9705ba894 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 118 177 2.0E-25 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 S40542_RS02000 fb9f77c23ac71a2ba0f57eb9705ba894 191 SUPERFAMILY SSF89360 1 97 6.87E-22 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS02000 fb9f77c23ac71a2ba0f57eb9705ba894 191 Pfam PF01106 NifU-like domain 111 177 4.1E-19 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 S40542_RS02000 fb9f77c23ac71a2ba0f57eb9705ba894 191 SUPERFAMILY SSF117916 95 184 7.19E-23 T 11-11-2016 S40542_RS02000 fb9f77c23ac71a2ba0f57eb9705ba894 191 Gene3D G3DSA:2.60.300.12 1 97 4.9E-19 T 11-11-2016 IPR000361 FeS cluster biogenesis S40542_RS02000 fb9f77c23ac71a2ba0f57eb9705ba894 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 4.7E-96 T 11-11-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 S40542_RS02000 fb9f77c23ac71a2ba0f57eb9705ba894 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 44.223 T 11-11-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 S40542_RS00510 5839bc4faf8754294fc9c33c89caf1c9 199 SUPERFAMILY SSF55718 14 118 2.74E-8 T 11-11-2016 IPR003033 SCP2 sterol-binding domain S40542_RS00510 5839bc4faf8754294fc9c33c89caf1c9 199 Pfam PF02036 SCP-2 sterol transfer family 14 111 1.9E-13 T 11-11-2016 IPR003033 SCP2 sterol-binding domain S40542_RS09685 087d48abb055d959007af05f868155e0 329 Pfam PF11279 Protein of unknown function (DUF3080) 27 328 1.6E-59 T 11-11-2016 IPR021431 Protein of unknown function DUF3080 S40542_RS00435 e8c6956720327b16b3d62b26235cf697 178 PIRSF PIRSF011484 1 178 4.5E-69 T 11-11-2016 IPR009822 YaeQ S40542_RS00435 e8c6956720327b16b3d62b26235cf697 178 Pfam PF07152 YaeQ protein 1 172 2.7E-73 T 11-11-2016 IPR009822 YaeQ S40542_RS00435 e8c6956720327b16b3d62b26235cf697 178 Gene3D G3DSA:3.10.640.10 1 178 1.4E-77 T 11-11-2016 S40542_RS00435 e8c6956720327b16b3d62b26235cf697 178 SMART SM01322 1 176 4.8E-109 T 11-11-2016 IPR009822 YaeQ S40542_RS00435 e8c6956720327b16b3d62b26235cf697 178 SUPERFAMILY SSF52980 2 177 1.39E-68 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 SUPERFAMILY SSF55920 5 255 1.83E-81 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 Gene3D G3DSA:3.90.230.10 6 256 2.7E-89 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 251 2.5E-88 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 1.0E-20 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 1.0E-20 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 1.0E-20 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 1.0E-20 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 37.139 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 S40542_RS13940 45cf316b06531eb7cd9e7cf324f0d15b 260 Pfam PF00557 Metallopeptidase family M24 14 243 9.0E-51 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS14880 47b06e70ff3b978da601a2a393baa1f6 279 Gene3D G3DSA:3.20.20.150 7 273 4.9E-96 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain S40542_RS14880 47b06e70ff3b978da601a2a393baa1f6 279 SUPERFAMILY SSF51658 28 206 3.65E-13 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain S40542_RS14880 47b06e70ff3b978da601a2a393baa1f6 279 Pfam PF05114 Protein of unknown function (DUF692) 8 268 3.2E-102 T 11-11-2016 IPR007801 Uncharacterised protein family UPF0276 S40542_RS14265 fd81a5467dca0acf776266e67500a374 343 Pfam PF01594 Domain of unknown function DUF20 11 323 4.5E-59 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like S40542_RS25575 ed74b337e21fd41f6cabd266b1021d71 151 Pfam PF02839 Carbohydrate binding domain 74 114 9.2E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS25575 ed74b337e21fd41f6cabd266b1021d71 151 Gene3D G3DSA:2.10.10.20 71 125 6.8E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS25575 ed74b337e21fd41f6cabd266b1021d71 151 SMART SM00495 73 122 5.5E-4 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS25575 ed74b337e21fd41f6cabd266b1021d71 151 SUPERFAMILY SSF51055 61 125 8.63E-8 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS14800 ee8c9edd9a2e402511ff1253f72b5391 100 SMART SM00530 25 82 3.5E-5 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS14800 ee8c9edd9a2e402511ff1253f72b5391 100 SUPERFAMILY SSF47413 21 82 8.58E-10 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS14800 ee8c9edd9a2e402511ff1253f72b5391 100 Pfam PF01381 Helix-turn-helix 26 76 1.5E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS14800 ee8c9edd9a2e402511ff1253f72b5391 100 Gene3D G3DSA:1.10.260.40 14 81 2.0E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS16100 b29396e9f4a370c7cb58cd86b1777aea 301 PRINTS PR01270 Histone deacetylase superfamily signature 148 163 1.6E-15 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS16100 b29396e9f4a370c7cb58cd86b1777aea 301 PRINTS PR01270 Histone deacetylase superfamily signature 222 232 1.6E-15 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS16100 b29396e9f4a370c7cb58cd86b1777aea 301 PRINTS PR01270 Histone deacetylase superfamily signature 114 137 1.6E-15 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS16100 b29396e9f4a370c7cb58cd86b1777aea 301 Pfam PF00850 Histone deacetylase domain 38 278 8.6E-48 T 11-11-2016 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS16100 b29396e9f4a370c7cb58cd86b1777aea 301 SUPERFAMILY SSF52768 2 279 1.49E-76 T 11-11-2016 S40542_RS16100 b29396e9f4a370c7cb58cd86b1777aea 301 Gene3D G3DSA:3.40.800.20 2 289 2.8E-57 T 11-11-2016 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 S40542_RS08165 12a025e06fbc0d5231afb2b2aa0bf928 494 Gene3D G3DSA:3.30.1330.120 300 437 9.6E-53 T 11-11-2016 S40542_RS08165 12a025e06fbc0d5231afb2b2aa0bf928 494 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 494 7.9E-252 T 11-11-2016 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 S40542_RS08165 12a025e06fbc0d5231afb2b2aa0bf928 494 Pfam PF03972 MmgE/PrpD family 18 472 4.8E-144 T 11-11-2016 IPR005656 MmgE/PrpD GO:0016829 S40542_RS08165 12a025e06fbc0d5231afb2b2aa0bf928 494 SUPERFAMILY SSF103378 13 493 4.18E-143 T 11-11-2016 IPR005656 MmgE/PrpD GO:0016829 S40542_RS13300 5a6f9ead76f20482ddf0768ce6b2bee7 215 SUPERFAMILY SSF51182 107 193 1.02E-10 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS13300 5a6f9ead76f20482ddf0768ce6b2bee7 215 Gene3D G3DSA:2.60.120.10 103 195 3.2E-10 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS15630 2c0a3616309f1779c449fe78c47fdc6e 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 1.4E-96 T 11-11-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS15630 2c0a3616309f1779c449fe78c47fdc6e 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 184 1.6E-30 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS15630 2c0a3616309f1779c449fe78c47fdc6e 193 Pfam PF04542 Sigma-70 region 2 25 92 2.5E-17 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS15630 2c0a3616309f1779c449fe78c47fdc6e 193 SUPERFAMILY SSF88946 4 108 4.4E-30 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS15630 2c0a3616309f1779c449fe78c47fdc6e 193 SUPERFAMILY SSF88659 123 184 2.43E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS15630 2c0a3616309f1779c449fe78c47fdc6e 193 Pfam PF08281 Sigma-70, region 4 134 181 7.1E-17 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS15630 2c0a3616309f1779c449fe78c47fdc6e 193 Gene3D G3DSA:1.10.10.10 123 187 7.8E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15630 2c0a3616309f1779c449fe78c47fdc6e 193 Gene3D G3DSA:1.10.1740.10 3 111 9.6E-36 T 11-11-2016 S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 Pfam PF01464 Transglycosylase SLT domain 122 221 2.3E-19 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 Pfam PF01476 LysM domain 382 423 7.7E-16 T 11-11-2016 IPR018392 LysM domain S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 Pfam PF01476 LysM domain 331 373 5.0E-12 T 11-11-2016 IPR018392 LysM domain S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 SUPERFAMILY SSF54106 380 423 1.44E-12 T 11-11-2016 IPR018392 LysM domain S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 Gene3D G3DSA:1.10.530.10 103 250 9.5E-41 T 11-11-2016 S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 SUPERFAMILY SSF53955 106 250 7.45E-37 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 SUPERFAMILY SSF54106 328 373 3.01E-11 T 11-11-2016 IPR018392 LysM domain S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 SMART SM00257 381 424 5.5E-18 T 11-11-2016 IPR018392 LysM domain S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 SMART SM00257 330 373 3.8E-15 T 11-11-2016 IPR018392 LysM domain S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 Gene3D G3DSA:3.10.350.10 381 423 3.5E-19 T 11-11-2016 IPR018392 LysM domain S40542_RS20565 a17eb43527a2d565419431fe62859c0c 428 Gene3D G3DSA:3.10.350.10 328 373 1.9E-17 T 11-11-2016 IPR018392 LysM domain S40542_RS15085 eb332f7e7ea86afe746bd9826c133c95 392 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 86 305 1.3E-32 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS15085 eb332f7e7ea86afe746bd9826c133c95 392 SUPERFAMILY SSF111369 99 310 1.7E-10 T 11-11-2016 S40542_RS15085 eb332f7e7ea86afe746bd9826c133c95 392 Gene3D G3DSA:2.40.50.100 202 235 1.4E-7 T 11-11-2016 S40542_RS15085 eb332f7e7ea86afe746bd9826c133c95 392 Gene3D G3DSA:2.40.50.100 101 132 1.4E-7 T 11-11-2016 S40542_RS05940 79446558287ccce2af741259788ea7fb 388 SUPERFAMILY SSF53187 8 189 1.1E-54 T 11-11-2016 S40542_RS05940 79446558287ccce2af741259788ea7fb 388 SUPERFAMILY SSF53187 305 387 1.1E-54 T 11-11-2016 S40542_RS05940 79446558287ccce2af741259788ea7fb 388 SUPERFAMILY SSF55031 190 297 1.21E-18 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS05940 79446558287ccce2af741259788ea7fb 388 Gene3D G3DSA:3.30.70.360 199 297 5.5E-20 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS05940 79446558287ccce2af741259788ea7fb 388 Pfam PF07687 Peptidase dimerisation domain 186 287 9.8E-18 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS05940 79446558287ccce2af741259788ea7fb 388 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 16 384 1.3E-110 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 S40542_RS05940 79446558287ccce2af741259788ea7fb 388 Gene3D G3DSA:3.40.630.10 12 198 6.4E-66 T 11-11-2016 S40542_RS05940 79446558287ccce2af741259788ea7fb 388 Gene3D G3DSA:3.40.630.10 329 386 6.4E-66 T 11-11-2016 S40542_RS05940 79446558287ccce2af741259788ea7fb 388 Pfam PF01546 Peptidase family M20/M25/M40 76 383 1.4E-35 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 9.3E-18 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 SUPERFAMILY SSF48008 76 208 6.8E-20 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 Gene3D G3DSA:1.20.120.530 73 212 1.2E-30 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.1E-5 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.1E-5 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 SMART SM00345 12 70 4.4E-19 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 SMART SM00895 80 205 7.8E-14 T 11-11-2016 IPR011711 GntR, C-terminal S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 SUPERFAMILY SSF46785 6 74 7.87E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 Pfam PF07729 FCD domain 80 203 4.7E-19 T 11-11-2016 IPR011711 GntR, C-terminal S40542_RS08035 cc3384141ce916a6f2462397e2ae1ed3 221 Gene3D G3DSA:1.10.10.10 5 71 3.2E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17190 9e65253a044e1c8f32821f4d7d48b16f 147 Pfam PF00258 Flavodoxin 7 127 6.1E-21 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 S40542_RS17190 9e65253a044e1c8f32821f4d7d48b16f 147 Gene3D G3DSA:3.40.50.360 1 145 7.7E-35 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS17190 9e65253a044e1c8f32821f4d7d48b16f 147 SUPERFAMILY SSF52218 1 145 1.62E-36 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS14890 1f21f11f4f1beece09ce2da954a08e2d 326 SUPERFAMILY SSF51395 1 315 8.06E-68 T 11-11-2016 S40542_RS14890 1f21f11f4f1beece09ce2da954a08e2d 326 Gene3D G3DSA:3.20.20.70 2 241 1.0E-63 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS14890 1f21f11f4f1beece09ce2da954a08e2d 326 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 314 51.086 T 11-11-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 S40542_RS14890 1f21f11f4f1beece09ce2da954a08e2d 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS14890 1f21f11f4f1beece09ce2da954a08e2d 326 Pfam PF01207 Dihydrouridine synthase (Dus) 4 312 1.0E-72 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS14890 1f21f11f4f1beece09ce2da954a08e2d 326 PIRSF PIRSF006621 1 325 3.9E-78 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 Gene3D G3DSA:2.40.50.100 265 295 1.5E-10 T 11-11-2016 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 Gene3D G3DSA:2.40.50.100 70 101 1.5E-10 T 11-11-2016 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 SUPERFAMILY SSF56954 119 265 5.62E-6 T 11-11-2016 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 Gene3D G3DSA:1.20.1600.10 119 264 5.8E-8 T 11-11-2016 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 Pfam PF13437 HlyD family secretion protein 264 352 1.2E-10 T 11-11-2016 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 355 9.0E-20 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 397 414 9.0E-20 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 9.0E-20 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 9.0E-20 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 382 397 9.0E-20 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20655 faa6bc56ef64e4cfa4045a65937615fe 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 9.0E-20 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS12530 150c9e24d182dbc5cff193842ce41d70 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 5.9E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS12530 150c9e24d182dbc5cff193842ce41d70 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 5.9E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS12530 150c9e24d182dbc5cff193842ce41d70 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 2.0E-13 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS12530 150c9e24d182dbc5cff193842ce41d70 180 SUPERFAMILY SSF46689 4 79 5.13E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS12530 150c9e24d182dbc5cff193842ce41d70 180 SUPERFAMILY SSF48498 74 158 8.34E-9 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal S40542_RS12530 150c9e24d182dbc5cff193842ce41d70 180 Gene3D G3DSA:1.10.357.10 4 159 7.2E-27 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS04725 2c76874071dc51095d6895a407626739 482 Pfam PF01467 Cytidylyltransferase-like 347 441 6.3E-14 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS04725 2c76874071dc51095d6895a407626739 482 Pfam PF00294 pfkB family carbohydrate kinase 12 305 4.4E-39 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB S40542_RS04725 2c76874071dc51095d6895a407626739 482 SUPERFAMILY SSF53613 12 313 5.92E-55 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS04725 2c76874071dc51095d6895a407626739 482 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 337 478 1.5E-59 T 11-11-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 S40542_RS04725 2c76874071dc51095d6895a407626739 482 Gene3D G3DSA:3.40.50.620 342 465 2.2E-33 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS04725 2c76874071dc51095d6895a407626739 482 Gene3D G3DSA:3.40.1190.20 13 314 1.6E-63 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS04725 2c76874071dc51095d6895a407626739 482 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 3.3E-113 T 11-11-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 S40542_RS04725 2c76874071dc51095d6895a407626739 482 Hamap MF_01603 Bifunctional protein HldE [hldE]. 5 480 40.442 T 11-11-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 S40542_RS04725 2c76874071dc51095d6895a407626739 482 SUPERFAMILY SSF52374 342 475 4.15E-23 T 11-11-2016 S40542_RS04725 2c76874071dc51095d6895a407626739 482 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 344 410 2.7E-16 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 SUPERFAMILY SSF51735 8 252 2.14E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 Gene3D G3DSA:3.40.50.720 5 252 5.8E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 4.1E-48 T 11-11-2016 S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.6E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.6E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.6E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS02790 66d4151b8e17e90e836afd397a29e87a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS12540 885c3216a2db76f730aa0a8befb54b42 371 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 208 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site S40542_RS12540 885c3216a2db76f730aa0a8befb54b42 371 Gene3D G3DSA:3.90.1150.10 267 371 8.0E-36 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS12540 885c3216a2db76f730aa0a8befb54b42 371 SUPERFAMILY SSF53383 10 371 1.85E-106 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS12540 885c3216a2db76f730aa0a8befb54b42 371 Pfam PF00266 Aminotransferase class-V 12 348 2.1E-38 T 11-11-2016 IPR000192 Aminotransferase class V domain S40542_RS12540 885c3216a2db76f730aa0a8befb54b42 371 PIRSF PIRSF000524 5 371 3.8E-115 T 11-11-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 S40542_RS12540 885c3216a2db76f730aa0a8befb54b42 371 Gene3D G3DSA:3.40.640.10 22 266 6.2E-57 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 312 1.4E-88 T 11-11-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 SMART SM00047 159 325 3.5E-28 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 Pfam PF10135 Rod binding protein 56 106 1.0E-16 T 11-11-2016 IPR019301 Flagellar protein FlgJ, N-terminal S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 Gene3D G3DSA:1.10.530.10 157 212 3.6E-4 T 11-11-2016 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 179 311 9.0E-20 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 PRINTS PR01002 Flagellar protein FlgJ signature 233 254 9.7E-26 T 11-11-2016 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 PRINTS PR01002 Flagellar protein FlgJ signature 191 209 9.7E-26 T 11-11-2016 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 PRINTS PR01002 Flagellar protein FlgJ signature 33 56 9.7E-26 T 11-11-2016 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 PRINTS PR01002 Flagellar protein FlgJ signature 298 316 9.7E-26 T 11-11-2016 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 PRINTS PR01002 Flagellar protein FlgJ signature 211 232 9.7E-26 T 11-11-2016 S40542_RS06120 b8e8f209f59e27b8f10453d9d136438e 330 PRINTS PR01002 Flagellar protein FlgJ signature 255 276 9.7E-26 T 11-11-2016 S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 SUPERFAMILY SSF48008 94 232 3.66E-20 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.8E-25 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 Pfam PF07729 FCD domain 98 223 2.7E-19 T 11-11-2016 IPR011711 GntR, C-terminal S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.0E-11 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.0E-11 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 Gene3D G3DSA:1.20.120.530 97 235 2.7E-19 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 SUPERFAMILY SSF46785 6 76 1.12E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 Gene3D G3DSA:1.10.10.10 7 76 5.5E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 SMART SM00345 14 73 3.1E-29 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS02415 98512b76061edb79b0c8cf58511b9e51 249 SMART SM00895 98 224 3.7E-18 T 11-11-2016 IPR011711 GntR, C-terminal S40542_RS16585 fe395084e6223f59ee151fbfd8b0c7b8 336 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 8 131 4.6E-30 T 11-11-2016 IPR006521 Tail protein I S40542_RS16585 fe395084e6223f59ee151fbfd8b0c7b8 336 Pfam PF09684 Phage tail protein (Tail_P2_I) 16 167 2.8E-34 T 11-11-2016 IPR006521 Tail protein I S40542_RS04265 41a4dca69f4ee6ef541ce66f1be28215 60 SUPERFAMILY SSF46955 4 52 4.3E-6 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS04265 41a4dca69f4ee6ef541ce66f1be28215 60 Pfam PF12728 Helix-turn-helix domain 4 52 1.8E-7 T 11-11-2016 S40542_RS04265 41a4dca69f4ee6ef541ce66f1be28215 60 Gene3D G3DSA:1.10.1660.10 4 51 1.2E-5 T 11-11-2016 S40542_RS09385 d73f3e39f0d340dd8730a43f5fdb0bac 105 SUPERFAMILY SSF54736 20 104 7.85E-32 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like S40542_RS09385 d73f3e39f0d340dd8730a43f5fdb0bac 105 Gene3D G3DSA:3.30.1390.10 11 105 2.7E-42 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like S40542_RS09385 d73f3e39f0d340dd8730a43f5fdb0bac 105 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 101 3.8E-35 T 11-11-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 S40542_RS09385 d73f3e39f0d340dd8730a43f5fdb0bac 105 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 11 100 27.944 T 11-11-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS S40542_RS14045 ed6b5a29658a1dc92d33b7996c8d4c12 387 Gene3D G3DSA:1.20.1260.10 11 102 1.5E-5 T 11-11-2016 IPR012347 Ferritin-related S40542_RS14045 ed6b5a29658a1dc92d33b7996c8d4c12 387 Pfam PF12902 Ferritin-like 16 255 1.1E-61 T 11-11-2016 S40542_RS19315 c81750b1fc8a0aa6ba89bc1d9a92b5fa 172 SUPERFAMILY SSF110087 6 159 3.92E-41 T 11-11-2016 IPR007410 DR1885-like metal-binding protein S40542_RS19315 c81750b1fc8a0aa6ba89bc1d9a92b5fa 172 Pfam PF04314 Protein of unknown function (DUF461) 44 151 3.3E-32 T 11-11-2016 IPR007410 DR1885-like metal-binding protein S40542_RS16075 753a4f791ce73a6f2dc24833258decb6 881 Gene3D G3DSA:2.40.170.20 294 881 6.0E-83 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16075 753a4f791ce73a6f2dc24833258decb6 881 Gene3D G3DSA:2.40.170.20 169 228 6.0E-83 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16075 753a4f791ce73a6f2dc24833258decb6 881 Gene3D G3DSA:2.170.130.10 28 168 2.4E-33 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS16075 753a4f791ce73a6f2dc24833258decb6 881 Pfam PF00593 TonB dependent receptor 555 879 6.2E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16075 753a4f791ce73a6f2dc24833258decb6 881 SUPERFAMILY SSF56935 312 663 1.76E-97 T 11-11-2016 S40542_RS16075 753a4f791ce73a6f2dc24833258decb6 881 SUPERFAMILY SSF56935 38 230 1.76E-97 T 11-11-2016 S40542_RS16075 753a4f791ce73a6f2dc24833258decb6 881 SUPERFAMILY SSF56935 693 881 1.76E-97 T 11-11-2016 S40542_RS16075 753a4f791ce73a6f2dc24833258decb6 881 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 3.4E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 SUPERFAMILY SSF46785 1 84 1.9E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 Pfam PF03466 LysR substrate binding domain 86 236 4.6E-18 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 Gene3D G3DSA:3.40.190.10 91 214 3.1E-14 T 11-11-2016 S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.1E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 SUPERFAMILY SSF53850 88 261 2.53E-16 T 11-11-2016 S40542_RS17320 d5ffc0d6f91997c46bd65141b343122f 282 Gene3D G3DSA:1.10.10.10 1 84 9.8E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04525 fcf420f69eada8360ae4e6bac1b1b0aa 378 SUPERFAMILY SSF102114 4 377 2.22E-107 T 11-11-2016 S40542_RS04525 fcf420f69eada8360ae4e6bac1b1b0aa 378 Pfam PF06969 HemN C-terminal domain 305 366 8.3E-11 T 11-11-2016 IPR010723 HemN, C-terminal S40542_RS04525 fcf420f69eada8360ae4e6bac1b1b0aa 378 Pfam PF04055 Radical SAM superfamily 10 175 7.0E-18 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS04525 fcf420f69eada8360ae4e6bac1b1b0aa 378 SMART SM00729 5 224 4.6E-51 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 S40542_RS04525 fcf420f69eada8360ae4e6bac1b1b0aa 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 370 3.5E-130 T 11-11-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 S40542_RS04525 fcf420f69eada8360ae4e6bac1b1b0aa 378 Gene3D G3DSA:3.80.30.20 6 238 5.9E-32 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe S40542_RS04525 fcf420f69eada8360ae4e6bac1b1b0aa 378 Gene3D G3DSA:1.10.10.10 314 376 1.3E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01460 f7e11785e7ea3706d4d3e511ab066694 80 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 67 0.004 T 11-11-2016 S40542_RS01460 f7e11785e7ea3706d4d3e511ab066694 80 Gene3D G3DSA:3.30.70.260 1 72 1.7E-11 T 11-11-2016 S40542_RS01460 f7e11785e7ea3706d4d3e511ab066694 80 Pfam PF13710 ACT domain 12 70 1.5E-18 T 11-11-2016 S40542_RS01460 f7e11785e7ea3706d4d3e511ab066694 80 SUPERFAMILY SSF55021 2 72 6.3E-9 T 11-11-2016 S40542_RS01450 3f4494e605ae2949e0f8743f2a473483 277 Pfam PF01963 TraB family 13 276 9.8E-60 T 11-11-2016 IPR002816 Pheromone shutdown, TraB S40542_RS08230 4bb8e349608f7bba8d48577f26ca4cd7 280 Gene3D G3DSA:3.40.50.1820 76 278 5.3E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08230 4bb8e349608f7bba8d48577f26ca4cd7 280 SUPERFAMILY SSF53474 76 279 5.79E-20 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08230 4bb8e349608f7bba8d48577f26ca4cd7 280 Pfam PF12146 Serine aminopeptidase, S33 82 213 1.6E-9 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 1.9E-16 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 1.9E-16 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 Pfam PF08334 Type II secretion system (T2SS), protein G 29 135 1.0E-34 T 11-11-2016 IPR013545 Type II secretion system protein G S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 SUPERFAMILY SSF54523 32 135 8.37E-34 T 11-11-2016 S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 Gene3D G3DSA:3.30.700.10 7 75 2.1E-5 T 11-11-2016 S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 6.5E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 26 5.8E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS02085 c4d2fe6ea900d4e199a1b5698aef2a5a 141 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 5 135 1.2E-47 T 11-11-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 S40542_RS17945 4e2c4679dacb8d22a90a5374c9ea82d2 163 SUPERFAMILY SSF142433 5 161 3.53E-54 T 11-11-2016 IPR008136 CinA, C-terminal S40542_RS17945 4e2c4679dacb8d22a90a5374c9ea82d2 163 Pfam PF02464 Competence-damaged protein 9 159 8.6E-55 T 11-11-2016 IPR008136 CinA, C-terminal S40542_RS17945 4e2c4679dacb8d22a90a5374c9ea82d2 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 157 1.5E-46 T 11-11-2016 IPR008136 CinA, C-terminal S40542_RS17945 4e2c4679dacb8d22a90a5374c9ea82d2 163 Gene3D G3DSA:3.90.950.20 5 162 5.3E-55 T 11-11-2016 IPR008136 CinA, C-terminal S40542_RS02285 e3870dc2f70a8c1960213dca43bfaaff 261 SUPERFAMILY SSF52540 9 243 3.42E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02285 e3870dc2f70a8c1960213dca43bfaaff 261 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS02285 e3870dc2f70a8c1960213dca43bfaaff 261 Gene3D G3DSA:3.40.50.300 8 252 3.9E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02285 e3870dc2f70a8c1960213dca43bfaaff 261 Pfam PF00005 ABC transporter 26 183 3.5E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS02285 e3870dc2f70a8c1960213dca43bfaaff 261 SMART SM00382 35 239 4.1E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 SUPERFAMILY SSF46894 6 101 7.65E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 Gene3D G3DSA:1.10.10.10 3 103 3.9E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 Gene3D G3DSA:1.25.40.10 579 699 3.1E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 Pfam PF13181 Tetratricopeptide repeat 672 699 0.11 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 SMART SM00028 294 330 56.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 SMART SM00028 585 618 270.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 SMART SM00028 448 481 100.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 SMART SM00028 670 703 48.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 SMART SM00862 24 100 1.8E-11 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 Gene3D G3DSA:1.25.40.10 297 543 2.6E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 SUPERFAMILY SSF48452 311 480 1.64E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 100 3.0E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS02755 cf628163e8064eebe4a942574c7ddcf2 750 SUPERFAMILY SSF48452 582 699 8.01E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS03095 25bfd77c22053792561d48d64b4dc170 368 SUPERFAMILY SSF46894 14 107 2.47E-14 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS03095 25bfd77c22053792561d48d64b4dc170 368 SMART SM00560 197 345 5.3E-4 T 11-11-2016 IPR006558 LamG-like jellyroll fold S40542_RS03095 25bfd77c22053792561d48d64b4dc170 368 SUPERFAMILY SSF49899 161 353 3.91E-34 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS03095 25bfd77c22053792561d48d64b4dc170 368 Pfam PF00486 Transcriptional regulatory protein, C terminal 37 106 1.9E-10 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS03095 25bfd77c22053792561d48d64b4dc170 368 Gene3D G3DSA:1.10.10.10 16 109 7.5E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03095 25bfd77c22053792561d48d64b4dc170 368 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 180 348 5.6E-24 T 11-11-2016 S40542_RS03095 25bfd77c22053792561d48d64b4dc170 368 Gene3D G3DSA:2.60.120.200 155 352 1.4E-30 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS03095 25bfd77c22053792561d48d64b4dc170 368 SMART SM00862 32 106 7.9E-8 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS04935 0d6d2da75cec67bc05cfb95f557c236c 560 SUPERFAMILY SSF81340 6 428 1.1E-84 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 S40542_RS04935 0d6d2da75cec67bc05cfb95f557c236c 560 Gene3D G3DSA:1.10.3080.10 9 429 6.7E-69 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 S40542_RS04935 0d6d2da75cec67bc05cfb95f557c236c 560 PRINTS PR00762 Chloride channel signature 376 395 1.7E-16 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 S40542_RS04935 0d6d2da75cec67bc05cfb95f557c236c 560 PRINTS PR00762 Chloride channel signature 358 374 1.7E-16 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 S40542_RS04935 0d6d2da75cec67bc05cfb95f557c236c 560 PRINTS PR00762 Chloride channel signature 163 182 1.7E-16 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 S40542_RS04935 0d6d2da75cec67bc05cfb95f557c236c 560 PRINTS PR00762 Chloride channel signature 112 131 1.7E-16 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 S40542_RS04935 0d6d2da75cec67bc05cfb95f557c236c 560 Pfam PF00654 Voltage gated chloride channel 73 407 3.1E-71 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-11-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 Gene3D G3DSA:2.30.30.30 119 195 9.9E-35 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 SMART SM01382 124 252 1.3E-95 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 PIRSF PIRSF002158 11 274 1.1E-103 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 Gene3D G3DSA:2.40.50.140 1 114 1.1E-49 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 8.0E-33 T 11-11-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 SUPERFAMILY SSF50249 2 125 2.09E-49 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 4.2E-58 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 5.4E-133 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.787 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 SMART SM01383 42 118 1.6E-44 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 Gene3D G3DSA:4.10.950.10 196 273 1.4E-35 T 11-11-2016 IPR014726 Ribosomal protein L2, domain 3 S40542_RS01190 1eaa731514dcc9402304e657a62fb759 274 SUPERFAMILY SSF50104 127 272 6.62E-63 T 11-11-2016 IPR008991 Translation protein SH3-like domain S40542_RS06140 79d295ed40b5d9b5c5b624378aa95362 320 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.7E-40 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06140 79d295ed40b5d9b5c5b624378aa95362 320 Gene3D G3DSA:1.20.1330.10 221 274 1.4E-55 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06140 79d295ed40b5d9b5c5b624378aa95362 320 Gene3D G3DSA:1.20.1330.10 54 170 1.4E-55 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06140 79d295ed40b5d9b5c5b624378aa95362 320 SUPERFAMILY SSF64518 1 319 7.72E-89 T 11-11-2016 S40542_RS06140 79d295ed40b5d9b5c5b624378aa95362 320 PRINTS PR00207 Flagellin signature 111 134 1.1E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06140 79d295ed40b5d9b5c5b624378aa95362 320 PRINTS PR00207 Flagellin signature 76 95 1.1E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06140 79d295ed40b5d9b5c5b624378aa95362 320 PRINTS PR00207 Flagellin signature 37 54 1.1E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06140 79d295ed40b5d9b5c5b624378aa95362 320 Pfam PF00700 Bacterial flagellin C-terminal helical region 235 318 8.8E-23 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS15820 fd3d2feb93b3311b2194203e96a664b1 272 Gene3D G3DSA:3.40.50.1980 20 137 5.5E-21 T 11-11-2016 S40542_RS15820 fd3d2feb93b3311b2194203e96a664b1 272 Pfam PF01497 Periplasmic binding protein 24 246 7.8E-25 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 S40542_RS15820 fd3d2feb93b3311b2194203e96a664b1 272 SUPERFAMILY SSF53807 21 263 5.1E-38 T 11-11-2016 S40542_RS15820 fd3d2feb93b3311b2194203e96a664b1 272 Gene3D G3DSA:3.40.50.1980 138 264 4.3E-13 T 11-11-2016 S40542_RS00060 1c3bbb9b6a81eb10047aa86829f65439 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 332 344 - T 11-11-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site S40542_RS00060 1c3bbb9b6a81eb10047aa86829f65439 440 Gene3D G3DSA:3.90.230.10 159 435 2.0E-49 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS00060 1c3bbb9b6a81eb10047aa86829f65439 440 SUPERFAMILY SSF55920 161 435 8.9E-53 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS00060 1c3bbb9b6a81eb10047aa86829f65439 440 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 440 59.577 T 11-11-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 S40542_RS00060 1c3bbb9b6a81eb10047aa86829f65439 440 Pfam PF00557 Metallopeptidase family M24 167 427 3.1E-43 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 Gene3D G3DSA:2.60.40.1180 382 467 6.5E-31 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 Gene3D G3DSA:3.20.20.80 26 377 3.8E-95 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 SMART SM00642 28 374 4.3E-76 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 SUPERFAMILY SSF51011 381 470 3.99E-29 T 11-11-2016 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 Pfam PF00128 Alpha amylase, catalytic domain 83 320 3.7E-16 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 387 466 2.5E-13 T 11-11-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 PRINTS PR00110 Alpha-amylase signature 221 239 2.3E-29 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 PRINTS PR00110 Alpha-amylase signature 193 204 2.3E-29 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 PRINTS PR00110 Alpha-amylase signature 103 114 2.3E-29 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 PRINTS PR00110 Alpha-amylase signature 71 88 2.3E-29 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 PRINTS PR00110 Alpha-amylase signature 279 291 2.3E-29 T 11-11-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 SMART SM00632 384 469 4.0E-31 T 11-11-2016 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 S40542_RS10050 18c7602c8b825b08cc46f0352a80dd28 471 SUPERFAMILY SSF51445 27 375 6.47E-77 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS01600 a966a7cfa2d5595a22c2cb88017a3901 704 Gene3D G3DSA:2.170.130.10 25 154 5.2E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS01600 a966a7cfa2d5595a22c2cb88017a3901 704 Gene3D G3DSA:2.40.170.20 155 703 6.6E-71 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS01600 a966a7cfa2d5595a22c2cb88017a3901 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 152 6.5E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS01600 a966a7cfa2d5595a22c2cb88017a3901 704 Pfam PF00593 TonB dependent receptor 443 703 6.1E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS01600 a966a7cfa2d5595a22c2cb88017a3901 704 SUPERFAMILY SSF56935 28 703 2.05E-97 T 11-11-2016 S40542_RS01470 be82f97d7aa9241caf8b66604fe0e326 618 SUPERFAMILY SSF143975 3 420 1.7E-131 T 11-11-2016 S40542_RS01470 be82f97d7aa9241caf8b66604fe0e326 618 Pfam PF00920 Dehydratase family 34 607 5.0E-211 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 S40542_RS01470 be82f97d7aa9241caf8b66604fe0e326 618 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 S40542_RS01470 be82f97d7aa9241caf8b66604fe0e326 618 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 2.4E-246 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 S40542_RS01470 be82f97d7aa9241caf8b66604fe0e326 618 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 S40542_RS01470 be82f97d7aa9241caf8b66604fe0e326 618 SUPERFAMILY SSF52016 421 611 7.61E-58 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel S40542_RS01470 be82f97d7aa9241caf8b66604fe0e326 618 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.179 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 S40542_RS05880 024d815a4210d01046aa1568065ceda4 402 SUPERFAMILY SSF63829 202 397 1.57E-14 T 11-11-2016 S40542_RS05880 024d815a4210d01046aa1568065ceda4 402 Pfam PF04862 Protein of unknown function (DUF642) 25 173 2.3E-8 T 11-11-2016 IPR006946 Domain of unknown function DUF642 S40542_RS05880 024d815a4210d01046aa1568065ceda4 402 Gene3D G3DSA:2.60.120.260 26 174 1.9E-8 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS05880 024d815a4210d01046aa1568065ceda4 402 Gene3D G3DSA:2.120.10.30 225 396 1.6E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS05880 024d815a4210d01046aa1568065ceda4 402 SUPERFAMILY SSF49785 21 174 1.13E-8 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS06100 967eb3817c96b90a199539f9791b9192 254 Pfam PF00460 Flagella basal body rod protein 5 35 1.8E-7 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 S40542_RS06100 967eb3817c96b90a199539f9791b9192 254 SUPERFAMILY SSF117143 77 212 9.94E-13 T 11-11-2016 S40542_RS06100 967eb3817c96b90a199539f9791b9192 254 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 247 1.6E-20 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain S40542_RS06100 967eb3817c96b90a199539f9791b9192 254 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 2.0E-28 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G S40542_RS03535 c100fe329f865abcd280f71f4d2df795 648 Pfam PF00563 EAL domain 405 630 1.2E-33 T 11-11-2016 IPR001633 EAL domain S40542_RS03535 c100fe329f865abcd280f71f4d2df795 648 SMART SM00267 229 386 9.9E-4 T 11-11-2016 IPR000160 GGDEF domain S40542_RS03535 c100fe329f865abcd280f71f4d2df795 648 SMART SM00052 398 637 3.1E-9 T 11-11-2016 IPR001633 EAL domain S40542_RS03535 c100fe329f865abcd280f71f4d2df795 648 Gene3D G3DSA:3.30.70.270 242 384 3.0E-7 T 11-11-2016 S40542_RS03535 c100fe329f865abcd280f71f4d2df795 648 Gene3D G3DSA:3.20.20.450 402 634 2.0E-31 T 11-11-2016 IPR001633 EAL domain S40542_RS03535 c100fe329f865abcd280f71f4d2df795 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 326 8.3E-6 T 11-11-2016 IPR000160 GGDEF domain S40542_RS03535 c100fe329f865abcd280f71f4d2df795 648 SUPERFAMILY SSF55073 246 384 1.8E-7 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS03535 c100fe329f865abcd280f71f4d2df795 648 SUPERFAMILY SSF141868 406 634 3.79E-30 T 11-11-2016 IPR001633 EAL domain S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 Gene3D G3DSA:2.40.50.100 572 645 1.9E-19 T 11-11-2016 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 SUPERFAMILY SSF51246 330 447 1.94E-39 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 601 618 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 SUPERFAMILY SSF52440 1 113 7.19E-48 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 321 1.5E-77 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 2.4E-44 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 Gene3D G3DSA:3.40.50.20 1 128 1.8E-52 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 SUPERFAMILY SSF56059 115 327 1.48E-68 T 11-11-2016 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 Gene3D G3DSA:3.30.470.20 204 448 9.0E-104 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 SMART SM00878 335 442 1.6E-53 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 Pfam PF02785 Biotin carboxylase C-terminal domain 335 442 1.0E-38 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 Gene3D G3DSA:3.30.1490.20 129 202 2.1E-27 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 SUPERFAMILY SSF51230 571 645 2.36E-19 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS13890 d0bc51c043452405b89b4938729210a6 650 Pfam PF00364 Biotin-requiring enzyme 583 643 3.6E-13 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS16875 9ca9e9bfed267ca70fe20837bda917d7 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-36 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 S40542_RS16875 9ca9e9bfed267ca70fe20837bda917d7 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.1E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS16875 9ca9e9bfed267ca70fe20837bda917d7 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.1E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS16875 9ca9e9bfed267ca70fe20837bda917d7 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.1E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS16875 9ca9e9bfed267ca70fe20837bda917d7 90 SUPERFAMILY SSF47729 1 90 1.18E-31 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 S40542_RS16875 9ca9e9bfed267ca70fe20837bda917d7 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.9E-33 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS16875 9ca9e9bfed267ca70fe20837bda917d7 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 S40542_RS16875 9ca9e9bfed267ca70fe20837bda917d7 90 SMART SM00411 1 90 6.9E-45 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.1E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.1E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.1E-11 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 SUPERFAMILY SSF54909 67 150 4.69E-19 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 Gene3D G3DSA:3.30.70.920 59 140 1.6E-23 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 1.4E-13 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 Pfam PF01037 Lrp/AsnC ligand binding domain 72 143 2.4E-18 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 Gene3D G3DSA:1.10.10.10 1 57 2.9E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 SUPERFAMILY SSF46785 4 66 2.11E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03355 3921d70cad2727c950d2cad8d1be195b 152 SMART SM00344 6 113 3.2E-39 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 SUPERFAMILY SSF52540 450 569 1.52E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 SUPERFAMILY SSF52540 4 204 1.52E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Pfam PF00005 ABC transporter 622 859 1.5E-11 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:1.20.1580.10 91 129 2.2E-54 T 11-11-2016 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:1.20.1580.10 251 284 2.2E-54 T 11-11-2016 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:1.20.1580.10 407 477 2.2E-54 T 11-11-2016 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 SUPERFAMILY SSF52540 620 910 6.93E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:1.10.8.280 286 406 3.1E-43 T 11-11-2016 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.917 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:3.40.50.300 478 596 3.8E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:3.40.50.300 2 51 3.8E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:3.40.50.300 820 937 4.4E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:3.40.50.300 601 691 4.4E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:1.20.1580.10 693 819 2.8E-55 T 11-11-2016 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:3.30.1490.20 200 247 5.3E-27 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS19140 a9c531100e4aa94a8577ade8eaa2dd06 939 Gene3D G3DSA:3.30.1490.20 130 153 5.3E-27 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS19565 6fd9e9f9d3a5f38b11e7832a811b5e0b 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 61 119 12.26 T 11-11-2016 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS19565 6fd9e9f9d3a5f38b11e7832a811b5e0b 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 66 120 2.9E-15 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 S40542_RS19565 6fd9e9f9d3a5f38b11e7832a811b5e0b 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 2.8E-34 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 S40542_RS19565 6fd9e9f9d3a5f38b11e7832a811b5e0b 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 2.8E-34 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 S40542_RS19565 6fd9e9f9d3a5f38b11e7832a811b5e0b 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 2.8E-34 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 S40542_RS19565 6fd9e9f9d3a5f38b11e7832a811b5e0b 125 PRINTS PR01650 Bacterial translocase SecE signature 107 123 2.8E-34 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 S40542_RS19565 6fd9e9f9d3a5f38b11e7832a811b5e0b 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 120 1.4E-19 T 11-11-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 S40542_RS19565 6fd9e9f9d3a5f38b11e7832a811b5e0b 125 Gene3D G3DSA:1.20.5.1030 63 121 2.8E-23 T 11-11-2016 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 Gene3D G3DSA:1.10.10.60 457 512 4.6E-25 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 231 244 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 SUPERFAMILY SSF46689 459 512 4.6E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 Gene3D G3DSA:3.30.70.260 2 69 3.4E-5 T 11-11-2016 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 291 306 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 Gene3D G3DSA:3.30.450.20 77 149 1.6E-10 T 11-11-2016 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 Pfam PF00989 PAS fold 82 130 4.9E-8 T 11-11-2016 IPR013767 PAS fold GO:0006355 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 SMART SM00382 227 368 1.2E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 Pfam PF00158 Sigma-54 interaction domain 208 371 7.5E-59 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 SMART SM00091 81 147 1.6E-6 T 11-11-2016 IPR000014 PAS domain S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 512 1.2E-27 T 11-11-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 Gene3D G3DSA:1.10.8.60 378 447 3.4E-24 T 11-11-2016 S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 SUPERFAMILY SSF55785 81 158 8.2E-11 T 11-11-2016 IPR000014 PAS domain S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 Gene3D G3DSA:3.40.50.300 204 377 5.1E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 418 427 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS05920 bd15d35e8b7e53aa7eadf135cb121e75 518 SUPERFAMILY SSF52540 207 445 2.92E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Gene3D G3DSA:3.30.450.20 17 123 4.3E-13 T 11-11-2016 S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Pfam PF08448 PAS fold 22 125 2.6E-7 T 11-11-2016 IPR013656 PAS fold-4 S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 423 584 4.6E-41 T 11-11-2016 IPR000160 GGDEF domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Pfam PF00990 Diguanylate cyclase, GGDEF domain 425 581 9.4E-51 T 11-11-2016 IPR000160 GGDEF domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SUPERFAMILY SSF55785 17 124 1.74E-14 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Pfam PF00563 EAL domain 603 835 5.7E-72 T 11-11-2016 IPR001633 EAL domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Gene3D G3DSA:3.30.70.270 427 594 3.6E-59 T 11-11-2016 S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SMART SM00086 83 124 10.0 T 11-11-2016 IPR001610 PAC motif S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SMART SM00086 372 414 1.5E-4 T 11-11-2016 IPR001610 PAC motif S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Pfam PF13426 PAS domain 311 412 4.6E-13 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Pfam PF13426 PAS domain 206 291 0.02 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Gene3D G3DSA:3.20.20.450 599 847 7.9E-95 T 11-11-2016 IPR001633 EAL domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SMART SM00267 413 586 6.9E-65 T 11-11-2016 IPR000160 GGDEF domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 Gene3D G3DSA:3.30.450.20 309 412 1.6E-22 T 11-11-2016 S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SUPERFAMILY SSF55785 306 412 8.38E-24 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SMART SM00052 596 840 1.8E-109 T 11-11-2016 IPR001633 EAL domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SUPERFAMILY SSF55073 430 587 6.04E-51 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SMART SM00091 193 257 49.0 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SMART SM00091 12 78 0.55 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SMART SM00091 300 366 3.4E-4 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 419 2.7E-15 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 131 1.6E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS20075 857834295c8153d3275edfa6f91bab2b 857 SUPERFAMILY SSF141868 601 849 1.01E-86 T 11-11-2016 IPR001633 EAL domain S40542_RS14155 0228724eab430d488864d0b397ba4ec2 820 SUPERFAMILY SSF53474 518 562 5.72E-12 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS14155 0228724eab430d488864d0b397ba4ec2 820 SUPERFAMILY SSF53474 423 480 5.72E-12 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS14155 0228724eab430d488864d0b397ba4ec2 820 Gene3D G3DSA:3.40.50.1820 431 608 1.1E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS14155 0228724eab430d488864d0b397ba4ec2 820 Gene3D G3DSA:3.40.50.1820 684 696 1.1E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS14155 0228724eab430d488864d0b397ba4ec2 820 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 283 7.2E-35 T 11-11-2016 IPR025920 Bacterial virulence factor lipase, N-terminal domain S40542_RS14155 0228724eab430d488864d0b397ba4ec2 820 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 805 3.5E-225 T 11-11-2016 IPR020009 Extracellular lipase, Pla-1/cef family S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 SUPERFAMILY SSF69864 175 401 1.44E-86 T 11-11-2016 S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 Pfam PF00764 Arginosuccinate synthase 8 395 1.9E-146 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 394 1.3E-140 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 SUPERFAMILY SSF52402 5 168 2.87E-45 T 11-11-2016 S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 51.336 T 11-11-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 Gene3D G3DSA:3.90.1260.10 177 402 5.9E-86 T 11-11-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 Gene3D G3DSA:3.40.50.620 5 174 1.1E-61 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS18355 4b528951adb2f684073d44e5ed85c99e 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 S40542_RS04975 92bba6250f950dc0e724c6c9cc3fa053 103 SUPERFAMILY SSF82657 1 87 1.12E-29 T 11-11-2016 IPR002634 BolA protein S40542_RS04975 92bba6250f950dc0e724c6c9cc3fa053 103 Gene3D G3DSA:3.30.300.90 1 100 5.6E-32 T 11-11-2016 IPR002634 BolA protein S40542_RS04975 92bba6250f950dc0e724c6c9cc3fa053 103 Pfam PF01722 BolA-like protein 11 82 1.6E-27 T 11-11-2016 IPR002634 BolA protein S40542_RS04975 92bba6250f950dc0e724c6c9cc3fa053 103 PIRSF PIRSF003113 1 98 1.6E-33 T 11-11-2016 IPR002634 BolA protein S40542_RS06610 8269c82b539e141e27499375dc0929de 262 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 2.7E-104 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 S40542_RS06610 8269c82b539e141e27499375dc0929de 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 3.1E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase S40542_RS06610 8269c82b539e141e27499375dc0929de 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 3.1E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase S40542_RS06610 8269c82b539e141e27499375dc0929de 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 3.1E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase S40542_RS06610 8269c82b539e141e27499375dc0929de 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 3.1E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase S40542_RS06610 8269c82b539e141e27499375dc0929de 262 Pfam PF00557 Metallopeptidase family M24 12 241 1.1E-56 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS06610 8269c82b539e141e27499375dc0929de 262 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 43.116 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 S40542_RS06610 8269c82b539e141e27499375dc0929de 262 Gene3D G3DSA:3.90.230.10 5 258 1.6E-105 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS06610 8269c82b539e141e27499375dc0929de 262 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 S40542_RS06610 8269c82b539e141e27499375dc0929de 262 SUPERFAMILY SSF55920 4 254 8.51E-96 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS03495 acb15abf9cdf4f7b6114275447fb6f35 237 Gene3D G3DSA:3.30.230.70 9 236 1.5E-34 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS03495 acb15abf9cdf4f7b6114275447fb6f35 237 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 9.9E-9 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS03495 acb15abf9cdf4f7b6114275447fb6f35 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 9.3E-113 T 11-11-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 S40542_RS03495 acb15abf9cdf4f7b6114275447fb6f35 237 SUPERFAMILY SSF55666 153 236 6.54E-24 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS03495 acb15abf9cdf4f7b6114275447fb6f35 237 SUPERFAMILY SSF54211 1 181 2.53E-45 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS03495 acb15abf9cdf4f7b6114275447fb6f35 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 6.0E-25 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 S40542_RS03495 acb15abf9cdf4f7b6114275447fb6f35 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-11-2016 IPR018336 Ribonuclease PH, conserved site S40542_RS03495 acb15abf9cdf4f7b6114275447fb6f35 237 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.428 T 11-11-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 S40542_RS24710 541e3591f83c4bfbd0ab4a10ff2b62d9 258 Gene3D G3DSA:3.40.50.300 23 212 4.9E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS24710 541e3591f83c4bfbd0ab4a10ff2b62d9 258 Gene3D G3DSA:3.40.50.300 216 258 3.3E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS24710 541e3591f83c4bfbd0ab4a10ff2b62d9 258 SMART SM00487 31 227 3.1E-25 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS24710 541e3591f83c4bfbd0ab4a10ff2b62d9 258 Pfam PF00270 DEAD/DEAH box helicase 38 194 3.0E-18 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS24710 541e3591f83c4bfbd0ab4a10ff2b62d9 258 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 24 257 9.5E-101 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 S40542_RS24710 541e3591f83c4bfbd0ab4a10ff2b62d9 258 SUPERFAMILY SSF52540 23 211 2.21E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05590 fe90a00883a3eac19b853a783ae5f389 229 Gene3D G3DSA:1.10.260.40 22 71 1.3E-6 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS05590 fe90a00883a3eac19b853a783ae5f389 229 Pfam PF00717 Peptidase S24-like 143 204 4.7E-10 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B S40542_RS05590 fe90a00883a3eac19b853a783ae5f389 229 SUPERFAMILY SSF47413 8 71 1.2E-5 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS05590 fe90a00883a3eac19b853a783ae5f389 229 SUPERFAMILY SSF51306 94 226 3.14E-24 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C S40542_RS05590 fe90a00883a3eac19b853a783ae5f389 229 Gene3D G3DSA:2.10.109.10 96 228 7.8E-24 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain S40542_RS07030 0b917e1f7d1dba734c1b005b3fc6fa60 234 Gene3D G3DSA:3.40.50.300 4 164 7.2E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07030 0b917e1f7d1dba734c1b005b3fc6fa60 234 Gene3D G3DSA:1.10.8.60 168 233 6.3E-28 T 11-11-2016 S40542_RS07030 0b917e1f7d1dba734c1b005b3fc6fa60 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 6 233 4.4E-75 T 11-11-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 S40542_RS07030 0b917e1f7d1dba734c1b005b3fc6fa60 234 SUPERFAMILY SSF52540 15 213 4.11E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07030 0b917e1f7d1dba734c1b005b3fc6fa60 234 Pfam PF00308 Bacterial dnaA protein 95 213 7.9E-17 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA S40542_RS04450 a3e8da2b450a270d996348764101445f 158 Pfam PF02542 YgbB family 2 155 2.5E-63 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 S40542_RS04450 a3e8da2b450a270d996348764101445f 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 34.774 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 S40542_RS04450 a3e8da2b450a270d996348764101445f 158 SUPERFAMILY SSF69765 1 157 1.57E-64 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 S40542_RS04450 a3e8da2b450a270d996348764101445f 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 11-11-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 S40542_RS04450 a3e8da2b450a270d996348764101445f 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 3.5E-66 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 S40542_RS04450 a3e8da2b450a270d996348764101445f 158 Gene3D G3DSA:3.30.1330.50 1 157 3.4E-69 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 S40542_RS01530 53f9374bef5dbe725a45e9f3d6ca42d8 179 Pfam PF06938 Protein of unknown function (DUF1285) 34 174 1.6E-29 T 11-11-2016 IPR010707 Protein of unknown function DUF1285 S40542_RS01530 53f9374bef5dbe725a45e9f3d6ca42d8 179 Gene3D G3DSA:2.30.270.10 84 153 1.0E-5 T 11-11-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain S40542_RS01530 53f9374bef5dbe725a45e9f3d6ca42d8 179 Gene3D G3DSA:3.10.540.10 16 81 3.6E-19 T 11-11-2016 S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 SUPERFAMILY SSF53474 102 354 2.46E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 Gene3D G3DSA:1.10.1200.10 3 75 3.8E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 Pfam PF12697 Alpha/beta hydrolase family 129 345 5.0E-13 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 Gene3D G3DSA:3.40.50.1820 99 355 4.2E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 SUPERFAMILY SSF47336 6 78 4.84E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 PRINTS PR00111 Alpha/beta hydrolase fold signature 298 312 1.3E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 PRINTS PR00111 Alpha/beta hydrolase fold signature 195 208 1.3E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 PRINTS PR00111 Alpha/beta hydrolase fold signature 151 166 1.3E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS08555 a691da694ccadeff3370d31d2b477922 358 Pfam PF00550 Phosphopantetheine attachment site 11 73 1.3E-6 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS18095 fe988bc72bfce7163b836f8aaf9f1972 109 Gene3D G3DSA:3.30.429.10 1 108 7.6E-29 T 11-11-2016 S40542_RS18095 fe988bc72bfce7163b836f8aaf9f1972 109 SUPERFAMILY SSF55331 2 108 1.23E-23 T 11-11-2016 IPR014347 Tautomerase/MIF superfamily S40542_RS09815 81cb10683078bd34469ccb2f57ebc8b2 136 SUPERFAMILY SSF55729 14 122 2.27E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS09815 81cb10683078bd34469ccb2f57ebc8b2 136 Pfam PF13508 Acetyltransferase (GNAT) domain 46 119 4.2E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS09815 81cb10683078bd34469ccb2f57ebc8b2 136 Gene3D G3DSA:3.40.630.30 13 129 1.7E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15750 363d74b4e8c24320dddafc1b35d705f0 104 Pfam PF07130 YebG protein 1 74 1.3E-31 T 11-11-2016 IPR009813 Uncharacterised protein family YebG S40542_RS15750 363d74b4e8c24320dddafc1b35d705f0 104 Gene3D G3DSA:1.10.10.710 20 89 5.9E-24 T 11-11-2016 IPR009813 Uncharacterised protein family YebG S40542_RS11960 5513cf55d31d2a28d594719fefbb2efa 130 Gene3D G3DSA:3.90.1340.10 82 108 4.4E-6 T 11-11-2016 IPR011083 Phage tail collar domain S40542_RS11960 5513cf55d31d2a28d594719fefbb2efa 130 SUPERFAMILY SSF88874 82 108 3.79E-6 T 11-11-2016 S40542_RS18120 722f40f7d22e49c6b97273d8b480cbd0 264 Gene3D G3DSA:3.40.190.10 53 106 1.5E-7 T 11-11-2016 S40542_RS18120 722f40f7d22e49c6b97273d8b480cbd0 264 Gene3D G3DSA:3.40.190.10 208 248 1.5E-7 T 11-11-2016 S40542_RS18120 722f40f7d22e49c6b97273d8b480cbd0 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 247 8.3E-13 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS18120 722f40f7d22e49c6b97273d8b480cbd0 264 SUPERFAMILY SSF53850 42 250 3.26E-21 T 11-11-2016 S40542_RS09785 5cea226bc66e062bf62247db5057a1a7 498 Gene3D G3DSA:3.30.70.360 230 382 4.6E-38 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS09785 5cea226bc66e062bf62247db5057a1a7 498 SUPERFAMILY SSF53187 412 495 6.58E-38 T 11-11-2016 S40542_RS09785 5cea226bc66e062bf62247db5057a1a7 498 SUPERFAMILY SSF53187 19 230 6.58E-38 T 11-11-2016 S40542_RS09785 5cea226bc66e062bf62247db5057a1a7 498 Gene3D G3DSA:3.40.630.10 18 224 2.1E-44 T 11-11-2016 S40542_RS09785 5cea226bc66e062bf62247db5057a1a7 498 Gene3D G3DSA:3.40.630.10 411 495 2.1E-44 T 11-11-2016 S40542_RS09785 5cea226bc66e062bf62247db5057a1a7 498 Pfam PF07687 Peptidase dimerisation domain 228 378 7.9E-15 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain S40542_RS09785 5cea226bc66e062bf62247db5057a1a7 498 Pfam PF01546 Peptidase family M20/M25/M40 126 495 1.2E-15 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 S40542_RS10720 d008004e5cf4f56c51ed99856cfc76e3 90 SUPERFAMILY SSF54292 23 89 2.62E-19 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS10720 d008004e5cf4f56c51ed99856cfc76e3 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 81 1.7E-11 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS10720 d008004e5cf4f56c51ed99856cfc76e3 90 Gene3D G3DSA:3.10.20.30 4 88 8.8E-19 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS10720 d008004e5cf4f56c51ed99856cfc76e3 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 SMART SM00433 35 798 2.1E-270 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 8.4E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 735 794 3.8E-29 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 SUPERFAMILY SSF54211 221 393 4.17E-60 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Gene3D G3DSA:3.40.50.670 719 787 2.2E-99 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Gene3D G3DSA:3.40.50.670 405 551 2.2E-99 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 SUPERFAMILY SSF55874 4 213 2.23E-73 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 SUPERFAMILY SSF56719 395 561 5.23E-87 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 SUPERFAMILY SSF56719 731 796 5.23E-87 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 5.8E-87 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 105.076 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 SMART SM00387 31 175 4.7E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Gene3D G3DSA:3.30.230.10 220 393 1.8E-77 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Pfam PF01751 Toprim domain 420 532 6.5E-19 T 11-11-2016 IPR006171 Toprim domain S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Gene3D G3DSA:3.30.565.10 15 214 8.1E-92 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 Pfam PF00204 DNA gyrase B 221 391 2.5E-61 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS00020 8d34e22527bfdb2d529f61fa12244c01 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 3.6E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS08490 9c18165790fdfc24ea7261ccc6d69f98 166 Gene3D G3DSA:3.40.630.30 7 149 5.9E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS08490 9c18165790fdfc24ea7261ccc6d69f98 166 SUPERFAMILY SSF55729 1 150 2.74E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS08490 9c18165790fdfc24ea7261ccc6d69f98 166 Pfam PF00583 Acetyltransferase (GNAT) family 54 140 8.7E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 Gene3D G3DSA:1.10.390.10 320 467 3.9E-34 T 11-11-2016 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 SUPERFAMILY SSF63737 27 222 1.11E-37 T 11-11-2016 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 Pfam PF01433 Peptidase family M1 34 399 1.1E-61 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 494 611 4.8E-28 T 11-11-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 280 290 1.9E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 161 176 1.9E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 206 221 1.9E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 307 322 1.9E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 326 338 1.9E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 SUPERFAMILY SSF55486 231 467 8.42E-61 T 11-11-2016 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 SMART SM01263 475 613 1.5E-46 T 11-11-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6 S40542_RS00605 625dd7d85bde2ae46b62e757db9d615e 614 SUPERFAMILY SSF48371 474 613 2.13E-40 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 S40542_RS17240 b61e3a448eff409798788b827e3f515f 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 143.23 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 S40542_RS17240 b61e3a448eff409798788b827e3f515f 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 4.5E-48 T 11-11-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 S40542_RS17240 b61e3a448eff409798788b827e3f515f 281 Gene3D G3DSA:3.30.1130.10 145 279 5.2E-52 T 11-11-2016 S40542_RS17240 b61e3a448eff409798788b827e3f515f 281 SUPERFAMILY SSF55620 185 265 7.26E-8 T 11-11-2016 S40542_RS17240 b61e3a448eff409798788b827e3f515f 281 PIRSF PIRSF004750 6 281 1.6E-121 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 S40542_RS17240 b61e3a448eff409798788b827e3f515f 281 Pfam PF14489 QueF-like protein 194 270 3.5E-26 T 11-11-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 S40542_RS17240 b61e3a448eff409798788b827e3f515f 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 7.3E-128 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 S40542_RS17240 b61e3a448eff409798788b827e3f515f 281 Gene3D G3DSA:3.30.1130.10 21 137 2.4E-41 T 11-11-2016 S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 321 3.2E-18 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 Pfam PF02154 Flagellar motor switch protein FliM 39 231 8.2E-81 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 PIRSF PIRSF002888 1 331 2.0E-98 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 SUPERFAMILY SSF101801 249 326 3.66E-15 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 5.9E-21 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 5.9E-21 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 5.9E-21 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 5.9E-21 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 SUPERFAMILY SSF103039 56 232 2.3E-19 T 11-11-2016 IPR028976 CheC-like domain S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 SUPERFAMILY SSF103039 4 13 2.3E-19 T 11-11-2016 IPR028976 CheC-like domain S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 321 2.4E-118 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 S40542_RS06405 0c878898c42a9d953c2f8a44f5f91bf5 364 Gene3D G3DSA:2.30.330.10 246 328 4.1E-10 T 11-11-2016 S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 Gene3D G3DSA:1.20.59.10 4 86 4.7E-18 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 SUPERFAMILY SSF48179 243 367 6.91E-32 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 SUPERFAMILY SSF48600 5 90 5.49E-21 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 Pfam PF02153 Prephenate dehydrogenase 128 345 1.4E-28 T 11-11-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 SMART SM00830 11 91 7.1E-25 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 Gene3D G3DSA:3.40.50.720 87 248 3.2E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 SUPERFAMILY SSF51735 95 241 1.46E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 PIRSF PIRSF001499 3 376 5.4E-124 T 11-11-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 Pfam PF01817 Chorismate mutase type II 11 89 9.9E-17 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 S40542_RS15790 5dde92c6c1dd490096057db620c8d7c9 381 Gene3D G3DSA:1.10.3660.10 249 373 1.8E-41 T 11-11-2016 S40542_RS12050 863403c8537378a4ec84bf8e6d3cdd04 241 Gene3D G3DSA:1.10.1060.10 111 239 1.6E-46 T 11-11-2016 S40542_RS12050 863403c8537378a4ec84bf8e6d3cdd04 241 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 233 1.3E-86 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12050 863403c8537378a4ec84bf8e6d3cdd04 241 SUPERFAMILY SSF54292 5 110 9.69E-29 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS12050 863403c8537378a4ec84bf8e6d3cdd04 241 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 115 2.6E-31 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 S40542_RS12050 863403c8537378a4ec84bf8e6d3cdd04 241 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 152 163 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS12050 863403c8537378a4ec84bf8e6d3cdd04 241 Pfam PF13534 4Fe-4S dicluster domain 151 224 2.1E-9 T 11-11-2016 S40542_RS12050 863403c8537378a4ec84bf8e6d3cdd04 241 SUPERFAMILY SSF46548 111 237 1.26E-37 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 S40542_RS12050 863403c8537378a4ec84bf8e6d3cdd04 241 Gene3D G3DSA:3.10.20.30 4 110 1.4E-35 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 322 42.583 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 Gene3D G3DSA:3.30.540.10 12 183 1.6E-62 T 11-11-2016 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 15 183 3.8E-53 T 11-11-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 PIRSF PIRSF500210 5 322 7.2E-115 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 SUPERFAMILY SSF56655 4 321 1.04E-104 T 11-11-2016 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 Gene3D G3DSA:3.40.190.80 187 322 1.0E-54 T 11-11-2016 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 9.9E-59 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 9.9E-59 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 297 322 9.9E-59 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 9.9E-59 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 9.9E-59 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 9.9E-59 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS02295 4e6d019a0745ee74ea1606c8efe3b66c 322 PIRSF PIRSF000904 7 322 3.8E-113 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 S40542_RS09565 384c356c13daf46bb8e86e4fee8f1cfb 205 Gene3D G3DSA:3.10.50.40 93 204 2.5E-45 T 11-11-2016 S40542_RS09565 384c356c13daf46bb8e86e4fee8f1cfb 205 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 115 202 4.7E-27 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 S40542_RS09565 384c356c13daf46bb8e86e4fee8f1cfb 205 SUPERFAMILY SSF54534 6 204 1.25E-56 T 11-11-2016 S40542_RS09565 384c356c13daf46bb8e86e4fee8f1cfb 205 Gene3D G3DSA:1.10.287.460 5 92 2.3E-23 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 S40542_RS09565 384c356c13daf46bb8e86e4fee8f1cfb 205 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 5 107 8.3E-25 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 S40542_RS12655 9b0bbd7105783f800f107c96aa451aa8 366 Pfam PF08443 RimK-like ATP-grasp domain 128 304 2.5E-7 T 11-11-2016 IPR013651 ATP-grasp fold, RimK-type S40542_RS12655 9b0bbd7105783f800f107c96aa451aa8 366 SUPERFAMILY SSF56059 140 309 5.65E-19 T 11-11-2016 S40542_RS12655 9b0bbd7105783f800f107c96aa451aa8 366 Gene3D G3DSA:3.30.470.20 209 300 1.0E-5 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS12845 e7aecf55b55832a521def6ed869ab3e5 135 SUPERFAMILY SSF54593 3 135 1.75E-22 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS12845 e7aecf55b55832a521def6ed869ab3e5 135 Gene3D G3DSA:3.10.180.10 1 134 3.4E-18 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS12845 e7aecf55b55832a521def6ed869ab3e5 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 131 2.8E-12 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 501 530 1.9E-8 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 417 1.9E-8 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 SUPERFAMILY SSF58104 327 634 1.22E-66 T 11-11-2016 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 Gene3D G3DSA:3.30.450.20 167 283 5.9E-19 T 11-11-2016 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 Pfam PF17201 Cache 3/Cache 2 fusion domain 178 283 2.1E-7 T 11-11-2016 IPR033462 Cache 3/Cache 2 fusion domain S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 331 566 0.001 T 11-11-2016 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 437 634 3.4E-44 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 SMART SM00283 374 634 1.1E-51 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 Gene3D G3DSA:1.10.287.950 388 605 2.6E-51 T 11-11-2016 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 Pfam PF00672 HAMP domain 287 355 2.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 SMART SM00304 394 461 30.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS15535 b246c4e2da9ae4778bfd564f6b402b8c 634 SMART SM00304 305 359 3.6E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS01055 65c7504ad3eb321d4168e2378c105a8d 210 Pfam PF10014 2OG-Fe dioxygenase 24 209 1.0E-51 T 11-11-2016 IPR018724 2OG-Fe dioxygenase S40542_RS19070 a321a5e1ff8d59ec6321a7db21820dcb 479 SUPERFAMILY SSF111283 15 478 1.57E-131 T 11-11-2016 S40542_RS19070 a321a5e1ff8d59ec6321a7db21820dcb 479 Pfam PF01523 Putative modulator of DNA gyrase 34 330 9.2E-65 T 11-11-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 S40542_RS19070 a321a5e1ff8d59ec6321a7db21820dcb 479 PIRSF PIRSF004919 12 479 6.0E-146 T 11-11-2016 IPR025502 TldD S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 Gene3D G3DSA:1.10.287.130 536 605 1.6E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 Pfam PF00072 Response regulator receiver domain 792 900 3.5E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 Pfam PF05231 MASE1 35 218 1.2E-19 T 11-11-2016 IPR007895 MASE1 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 SMART SM00388 544 609 1.5E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 Gene3D G3DSA:3.30.565.10 610 769 6.0E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 SUPERFAMILY SSF55874 598 769 2.23E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 SMART SM00448 790 903 9.7E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 Gene3D G3DSA:3.40.50.2300 789 909 3.4E-36 T 11-11-2016 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 SMART SM01079 263 448 7.7E-13 T 11-11-2016 IPR006189 CHASE domain S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 Pfam PF00512 His Kinase A (phospho-acceptor) domain 544 608 4.3E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 731 749 1.1E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 710 1.1E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 755 768 1.1E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 724 1.1E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 656 768 1.5E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 SUPERFAMILY SSF52172 789 907 5.98E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 SUPERFAMILY SSF47384 529 610 1.77E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 SMART SM00387 656 771 3.7E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20320 3a8f3f91cfc2332f10e5a80ef96f4b9d 916 Pfam PF03924 CHASE domain 266 443 7.8E-23 T 11-11-2016 IPR006189 CHASE domain S40542_RS02270 9e0253648681084567855e6a6e70ff00 397 Pfam PF00480 ROK family 93 361 7.1E-15 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 S40542_RS02270 9e0253648681084567855e6a6e70ff00 397 SUPERFAMILY SSF46785 10 73 1.0E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02270 9e0253648681084567855e6a6e70ff00 397 Gene3D G3DSA:1.10.10.10 9 77 5.3E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02270 9e0253648681084567855e6a6e70ff00 397 Gene3D G3DSA:3.30.420.40 78 209 1.7E-10 T 11-11-2016 S40542_RS02270 9e0253648681084567855e6a6e70ff00 397 SUPERFAMILY SSF53067 80 195 1.87E-6 T 11-11-2016 S40542_RS02270 9e0253648681084567855e6a6e70ff00 397 Gene3D G3DSA:3.30.420.40 210 319 1.5E-12 T 11-11-2016 S40542_RS02270 9e0253648681084567855e6a6e70ff00 397 SUPERFAMILY SSF53067 198 372 1.4E-17 T 11-11-2016 S40542_RS10955 48f4e70de25660308f16d0aa3dc71417 666 Hamap MF_00577 Urocanate hydratase [hutU]. 55 654 45.466 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 S40542_RS10955 48f4e70de25660308f16d0aa3dc71417 666 Gene3D G3DSA:3.40.1770.10 79 214 2.3E-61 T 11-11-2016 S40542_RS10955 48f4e70de25660308f16d0aa3dc71417 666 Gene3D G3DSA:3.40.1770.10 423 648 2.0E-108 T 11-11-2016 S40542_RS10955 48f4e70de25660308f16d0aa3dc71417 666 Gene3D G3DSA:3.40.1770.10 299 386 2.0E-108 T 11-11-2016 S40542_RS10955 48f4e70de25660308f16d0aa3dc71417 666 Pfam PF01175 Urocanase 85 640 5.6E-247 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 S40542_RS10955 48f4e70de25660308f16d0aa3dc71417 666 SUPERFAMILY SSF111326 85 648 1.57E-228 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 S40542_RS10955 48f4e70de25660308f16d0aa3dc71417 666 PIRSF PIRSF001423 66 658 1.6E-191 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 S40542_RS10955 48f4e70de25660308f16d0aa3dc71417 666 ProSitePatterns PS01233 Urocanase signature. 535 550 - T 11-11-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 S40542_RS14935 09528bfaee838e64e0eec6beb1140628 221 SUPERFAMILY SSF52777 2 204 4.45E-32 T 11-11-2016 S40542_RS14935 09528bfaee838e64e0eec6beb1140628 221 Gene3D G3DSA:3.30.559.10 1 205 5.0E-50 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 S40542_RS14935 09528bfaee838e64e0eec6beb1140628 221 Pfam PF00302 Chloramphenicol acetyltransferase 2 202 5.8E-26 T 11-11-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 S40542_RS14935 09528bfaee838e64e0eec6beb1140628 221 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 9 200 2.0E-28 T 11-11-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 S40542_RS14935 09528bfaee838e64e0eec6beb1140628 221 SMART SM01059 1 203 4.8E-45 T 11-11-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 SUPERFAMILY SSF46894 175 238 2.86E-16 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 Pfam PF03472 Autoinducer binding domain 17 164 1.2E-34 T 11-11-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 232 4.3E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 209 2.8E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 193 2.8E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 221 2.8E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 SMART SM00421 176 233 3.2E-17 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 ProSitePatterns PS00622 LuxR-type HTH domain signature. 193 220 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 Gene3D G3DSA:3.30.450.80 2 181 8.3E-42 T 11-11-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 SUPERFAMILY SSF75516 4 167 1.31E-38 T 11-11-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain S40542_RS18805 e1ad8664b56334dd39a1bd9222014abd 243 Gene3D G3DSA:1.10.10.10 182 237 1.5E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS14000 af6ed04aeb31a59afbb8e3af08ff9cd3 667 Pfam PF11412 Disulphide bond corrector protein DsbC 34 143 1.2E-17 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain S40542_RS14000 af6ed04aeb31a59afbb8e3af08ff9cd3 667 Gene3D G3DSA:3.40.30.10 553 662 7.5E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS14000 af6ed04aeb31a59afbb8e3af08ff9cd3 667 SUPERFAMILY SSF52833 556 656 2.85E-13 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS14000 af6ed04aeb31a59afbb8e3af08ff9cd3 667 Pfam PF13899 Thioredoxin-like 554 632 6.9E-12 T 11-11-2016 S40542_RS12520 24b3d5ad36a763cf2cc3c5cb104227f7 219 Pfam PF02525 Flavodoxin-like fold 15 192 2.1E-32 T 11-11-2016 IPR003680 Flavodoxin-like fold S40542_RS12520 24b3d5ad36a763cf2cc3c5cb104227f7 219 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 219 23.006 T 11-11-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 S40542_RS12520 24b3d5ad36a763cf2cc3c5cb104227f7 219 Gene3D G3DSA:3.40.50.360 1 217 2.8E-50 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS12520 24b3d5ad36a763cf2cc3c5cb104227f7 219 SUPERFAMILY SSF52218 2 216 3.49E-42 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 PRINTS PR00723 Subtilisin serine protease family (S8) signature 560 576 1.1E-11 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 PRINTS PR00723 Subtilisin serine protease family (S8) signature 241 254 1.1E-11 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 1.1E-11 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 Gene3D G3DSA:3.40.50.200 517 631 1.2E-61 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 Gene3D G3DSA:3.40.50.200 122 362 1.2E-61 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 SUPERFAMILY SSF49313 1135 1231 3.57E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 Pfam PF00082 Subtilase family 167 599 6.7E-38 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 Pfam PF02225 PA domain 402 495 1.7E-13 T 11-11-2016 IPR003137 PA domain S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 PRINTS PR00205 Cadherin signature 1278 1304 7.2E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 PRINTS PR00205 Cadherin signature 1135 1164 7.2E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 PRINTS PR00205 Cadherin signature 1198 1210 7.2E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 SUPERFAMILY SSF52743 521 632 9.82E-61 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 SUPERFAMILY SSF52743 152 366 9.82E-61 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 SUPERFAMILY SSF52025 421 514 6.02E-11 T 11-11-2016 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 SUPERFAMILY SSF49313 1237 1323 3.14E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 Gene3D G3DSA:2.60.40.60 1034 1123 1.1E-4 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 1332 1352 6.4E-4 T 11-11-2016 IPR020008 GlyGly-CTERM domain S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 Gene3D G3DSA:3.50.30.30 396 504 1.6E-26 T 11-11-2016 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 561 571 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 Gene3D G3DSA:2.60.40.60 1237 1322 3.3E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS20255 d8b72775c6708d3a0b9b3072bb8fb504 1354 Gene3D G3DSA:2.60.40.60 1140 1223 1.2E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS00650 1dac9b9672f7742e14aedab01688c468 237 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 27 232 1.8E-52 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.9E-231 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 Gene3D G3DSA:2.40.30.10 301 393 7.8E-46 T 11-11-2016 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-15 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 Gene3D G3DSA:2.40.30.10 212 298 6.0E-35 T 11-11-2016 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 SUPERFAMILY SSF50465 298 393 1.61E-34 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 SUPERFAMILY SSF50447 205 301 9.82E-29 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 Gene3D G3DSA:3.40.50.300 4 211 8.8E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 SUPERFAMILY SSF52540 6 219 4.15E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.1E-15 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-59 T 11-11-2016 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.2E-32 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.117 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS19510 0edffa05e40a6bc7cd7d16614a1a6c41 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS05275 c34ce0a434c4699a1618f17e37ff69cf 80 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 80 24.542 T 11-11-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 S40542_RS05275 c34ce0a434c4699a1618f17e37ff69cf 80 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 79 2.3E-14 T 11-11-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 S40542_RS05275 c34ce0a434c4699a1618f17e37ff69cf 80 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 76 1.1E-13 T 11-11-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 S40542_RS08100 056672ca587c63daa845d8b73f3aa2b7 437 Pfam PF12704 MacB-like periplasmic core domain 20 218 4.0E-17 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS08100 056672ca587c63daa845d8b73f3aa2b7 437 Pfam PF02687 FtsX-like permease family 315 430 5.7E-18 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS10915 9b8a42a57498b2038cfa78b6c3b497a6 744 Pfam PF00593 TonB dependent receptor 473 743 3.3E-24 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10915 9b8a42a57498b2038cfa78b6c3b497a6 744 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 587 6.2E-67 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 S40542_RS10915 9b8a42a57498b2038cfa78b6c3b497a6 744 Gene3D G3DSA:2.170.130.10 27 169 3.7E-33 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS10915 9b8a42a57498b2038cfa78b6c3b497a6 744 SUPERFAMILY SSF56935 48 590 1.34E-120 T 11-11-2016 S40542_RS10915 9b8a42a57498b2038cfa78b6c3b497a6 744 SUPERFAMILY SSF56935 625 744 1.34E-120 T 11-11-2016 S40542_RS10915 9b8a42a57498b2038cfa78b6c3b497a6 744 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 158 8.5E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS10915 9b8a42a57498b2038cfa78b6c3b497a6 744 Gene3D G3DSA:2.40.170.20 626 744 5.6E-121 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10915 9b8a42a57498b2038cfa78b6c3b497a6 744 Gene3D G3DSA:2.40.170.20 172 591 5.6E-121 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS05480 38b9d6653eb3b66d858e0256b219ff9c 370 Pfam PF00925 GTP cyclohydrolase II 207 367 4.1E-38 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 S40542_RS05480 38b9d6653eb3b66d858e0256b219ff9c 370 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 9.3E-73 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05480 38b9d6653eb3b66d858e0256b219ff9c 370 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 7.6E-83 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05480 38b9d6653eb3b66d858e0256b219ff9c 370 SUPERFAMILY SSF55821 3 201 1.81E-85 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain S40542_RS05480 38b9d6653eb3b66d858e0256b219ff9c 370 PIRSF PIRSF001259 1 369 7.9E-127 T 11-11-2016 S40542_RS05480 38b9d6653eb3b66d858e0256b219ff9c 370 SUPERFAMILY SSF142695 205 368 1.31E-46 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 S40542_RS05480 38b9d6653eb3b66d858e0256b219ff9c 370 Gene3D G3DSA:3.90.870.10 1 210 7.5E-98 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain S40542_RS05480 38b9d6653eb3b66d858e0256b219ff9c 370 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.546 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 Gene3D G3DSA:2.170.130.10 44 162 1.1E-32 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 Pfam PF00593 TonB dependent receptor 550 874 8.0E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 SUPERFAMILY SSF56935 287 579 1.23E-88 T 11-11-2016 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 SUPERFAMILY SSF56935 21 219 1.23E-88 T 11-11-2016 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 SUPERFAMILY SSF56935 627 670 1.23E-88 T 11-11-2016 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 SUPERFAMILY SSF56935 703 875 1.23E-88 T 11-11-2016 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 159 4.1E-21 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 Gene3D G3DSA:2.40.170.20 163 221 2.1E-71 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 Gene3D G3DSA:2.40.170.20 614 875 2.1E-71 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 Gene3D G3DSA:2.40.170.20 262 404 2.1E-71 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS14095 7c625ba2bd8d711261e6a571dcc5164e 875 Gene3D G3DSA:2.40.170.20 451 582 2.1E-71 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 Gene3D G3DSA:3.40.50.2300 4 134 1.9E-29 T 11-11-2016 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 Pfam PF02954 Bacterial regulatory protein, Fis family 421 461 3.5E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 Pfam PF00158 Sigma-54 interaction domain 156 321 7.2E-64 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 5.0E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 463 5.0E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 SUPERFAMILY SSF52540 155 394 4.89E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 SUPERFAMILY SSF46689 367 463 3.09E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 Gene3D G3DSA:1.10.10.60 380 463 1.1E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 Gene3D G3DSA:1.10.8.60 328 379 1.3E-21 T 11-11-2016 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 SUPERFAMILY SSF52172 6 200 2.13E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 241 256 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 Gene3D G3DSA:3.40.50.300 152 327 6.3E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 SMART SM00382 175 329 2.2E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 Pfam PF00072 Response regulator receiver domain 7 121 1.7E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20540 3ce736fb02fa218da9a6b24b0d05d8a0 463 SMART SM00448 5 121 4.4E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS11060 3bbada71a95871d08ef94f9b965bb74d 280 Pfam PF08668 HDOD domain 18 209 1.9E-41 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS11060 3bbada71a95871d08ef94f9b965bb74d 280 Gene3D G3DSA:1.10.3150.10 10 278 3.1E-56 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS11060 3bbada71a95871d08ef94f9b965bb74d 280 SUPERFAMILY SSF109604 9 276 8.79E-54 T 11-11-2016 S40542_RS04185 3203cf18e902caf306a98a43b2ef3617 240 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 3 239 1.4E-85 T 11-11-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 S40542_RS04185 3203cf18e902caf306a98a43b2ef3617 240 PIRSF PIRSF004808 2 240 4.3E-75 T 11-11-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 S40542_RS04185 3203cf18e902caf306a98a43b2ef3617 240 SUPERFAMILY SSF75217 4 166 2.29E-40 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS04185 3203cf18e902caf306a98a43b2ef3617 240 Pfam PF00588 SpoU rRNA Methylase family 6 155 7.2E-36 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 S40542_RS04185 3203cf18e902caf306a98a43b2ef3617 240 Gene3D G3DSA:3.40.1280.10 4 160 1.1E-33 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS16960 ca5d37230b4992bf3c6574ef13e1cb0b 307 Pfam PF00535 Glycosyl transferase family 2 7 138 6.8E-30 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 S40542_RS16960 ca5d37230b4992bf3c6574ef13e1cb0b 307 SUPERFAMILY SSF53448 5 218 1.02E-51 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS16960 ca5d37230b4992bf3c6574ef13e1cb0b 307 Gene3D G3DSA:3.90.550.10 5 214 6.0E-49 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS06095 fac4a545d1ab9805789a448df6688ef7 450 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site S40542_RS06095 fac4a545d1ab9805789a448df6688ef7 450 Pfam PF00460 Flagella basal body rod protein 3 33 3.7E-11 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 S40542_RS06095 fac4a545d1ab9805789a448df6688ef7 450 Pfam PF07559 Flagellar basal body protein FlaE 183 330 6.1E-21 T 11-11-2016 IPR011491 Flagellar hook protein FlgE S40542_RS06095 fac4a545d1ab9805789a448df6688ef7 450 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 432 1.1E-93 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G S40542_RS06095 fac4a545d1ab9805789a448df6688ef7 450 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 372 448 8.1E-15 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain S40542_RS06095 fac4a545d1ab9805789a448df6688ef7 450 SUPERFAMILY SSF117143 79 411 1.44E-69 T 11-11-2016 S40542_RS11845 6058870b459a1034860380db1131f001 1671 Gene3D G3DSA:2.160.10.10 1169 1253 4.7E-4 T 11-11-2016 S40542_RS11845 6058870b459a1034860380db1131f001 1671 Gene3D G3DSA:2.160.10.10 335 359 1.8E-4 T 11-11-2016 S40542_RS11845 6058870b459a1034860380db1131f001 1671 Gene3D G3DSA:2.160.10.10 845 893 1.8E-4 T 11-11-2016 S40542_RS11845 6058870b459a1034860380db1131f001 1671 SUPERFAMILY SSF51126 1437 1605 3.14E-6 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor S40542_RS11845 6058870b459a1034860380db1131f001 1671 Gene3D G3DSA:2.160.10.10 1077 1168 3.8E-4 T 11-11-2016 S40542_RS11845 6058870b459a1034860380db1131f001 1671 Gene3D G3DSA:2.160.10.10 979 1041 3.8E-4 T 11-11-2016 S40542_RS11845 6058870b459a1034860380db1131f001 1671 SUPERFAMILY SSF51161 1112 1253 1.13E-6 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS09515 8d40752aa546619bef52cd1f0cd890bd 234 SMART SM00934 8 229 8.9E-102 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS09515 8d40752aa546619bef52cd1f0cd890bd 234 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 6 234 40.631 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS09515 8d40752aa546619bef52cd1f0cd890bd 234 Gene3D G3DSA:3.20.20.70 6 233 6.1E-94 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS09515 8d40752aa546619bef52cd1f0cd890bd 234 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 10 229 2.4E-63 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS09515 8d40752aa546619bef52cd1f0cd890bd 234 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 8 228 7.7E-58 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS09515 8d40752aa546619bef52cd1f0cd890bd 234 SUPERFAMILY SSF51366 6 232 1.11E-81 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 S40542_RS09515 8d40752aa546619bef52cd1f0cd890bd 234 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 60 73 - T 11-11-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS10905 2a297d5b999b7e8de8a01976515fee8f 274 Pfam PF04397 LytTr DNA-binding domain 176 272 6.1E-24 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS10905 2a297d5b999b7e8de8a01976515fee8f 274 SMART SM00850 175 273 3.8E-36 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS10905 2a297d5b999b7e8de8a01976515fee8f 274 SMART SM00448 4 116 1.5E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10905 2a297d5b999b7e8de8a01976515fee8f 274 Pfam PF00072 Response regulator receiver domain 7 117 9.4E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10905 2a297d5b999b7e8de8a01976515fee8f 274 Gene3D G3DSA:2.40.50.40 167 234 4.0E-19 T 11-11-2016 S40542_RS10905 2a297d5b999b7e8de8a01976515fee8f 274 Gene3D G3DSA:3.40.50.2300 2 130 6.9E-33 T 11-11-2016 S40542_RS10905 2a297d5b999b7e8de8a01976515fee8f 274 SUPERFAMILY SSF52172 1 132 7.54E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS10905 2a297d5b999b7e8de8a01976515fee8f 274 Gene3D G3DSA:2.20.25.10 247 272 4.5E-5 T 11-11-2016 S40542_RS06380 a8d2bdac284269e40dd9b73773940076 272 PRINTS PR01003 Flagellar assembly protein FliH signature 118 136 6.0E-7 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 S40542_RS06380 a8d2bdac284269e40dd9b73773940076 272 PRINTS PR01003 Flagellar assembly protein FliH signature 95 117 6.0E-7 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 S40542_RS06380 a8d2bdac284269e40dd9b73773940076 272 PRINTS PR01003 Flagellar assembly protein FliH signature 227 243 6.0E-7 T 11-11-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 S40542_RS06380 a8d2bdac284269e40dd9b73773940076 272 Pfam PF02108 Flagellar assembly protein FliH 136 261 1.1E-32 T 11-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE S40542_RS00940 00893c6c1f5c7d0e131aa01d77afa699 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00940 00893c6c1f5c7d0e131aa01d77afa699 130 Pfam PF00410 Ribosomal protein S8 5 129 5.6E-46 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00940 00893c6c1f5c7d0e131aa01d77afa699 130 Gene3D G3DSA:3.30.1490.10 74 129 9.6E-27 T 11-11-2016 S40542_RS00940 00893c6c1f5c7d0e131aa01d77afa699 130 SUPERFAMILY SSF56047 5 129 1.09E-43 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00940 00893c6c1f5c7d0e131aa01d77afa699 130 Gene3D G3DSA:3.30.1370.30 3 71 2.6E-24 T 11-11-2016 S40542_RS00940 00893c6c1f5c7d0e131aa01d77afa699 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.337 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS11415 a6ab086451eb16c2855402fff533c4a7 377 Pfam PF12679 ABC-2 family transporter protein 6 365 9.0E-17 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 S40542_RS19675 31d7b83e683144359ba6d6f10797c00a 366 Gene3D G3DSA:3.50.50.60 3 83 4.1E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS19675 31d7b83e683144359ba6d6f10797c00a 366 Gene3D G3DSA:3.50.50.60 321 363 4.1E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS19675 31d7b83e683144359ba6d6f10797c00a 366 Gene3D G3DSA:3.50.50.60 138 220 4.1E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS19675 31d7b83e683144359ba6d6f10797c00a 366 Gene3D G3DSA:3.30.9.10 86 137 1.1E-5 T 11-11-2016 S40542_RS19675 31d7b83e683144359ba6d6f10797c00a 366 Gene3D G3DSA:3.30.9.10 224 314 1.1E-5 T 11-11-2016 S40542_RS19675 31d7b83e683144359ba6d6f10797c00a 366 Pfam PF01266 FAD dependent oxidoreductase 6 361 7.2E-59 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 S40542_RS19675 31d7b83e683144359ba6d6f10797c00a 366 SUPERFAMILY SSF51905 7 221 2.59E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS19675 31d7b83e683144359ba6d6f10797c00a 366 SUPERFAMILY SSF51905 323 361 2.59E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02680 95a5c4d05a22e2e178080562b581e22d 274 Pfam PF02012 BNR/Asp-box repeat 222 230 0.11 T 11-11-2016 IPR002860 BNR repeat S40542_RS02680 95a5c4d05a22e2e178080562b581e22d 274 Gene3D G3DSA:2.130.10.140 2 231 4.2E-23 T 11-11-2016 S40542_RS02680 95a5c4d05a22e2e178080562b581e22d 274 SUPERFAMILY SSF110296 2 257 3.14E-23 T 11-11-2016 S40542_RS14785 278646d63f51c9fc9cc464ef78d2242b 334 SMART SM00448 3 115 8.7E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS14785 278646d63f51c9fc9cc464ef78d2242b 334 Gene3D G3DSA:3.40.1550.10 137 329 1.4E-39 T 11-11-2016 IPR028976 CheC-like domain S40542_RS14785 278646d63f51c9fc9cc464ef78d2242b 334 SUPERFAMILY SSF52172 4 118 4.27E-29 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS14785 278646d63f51c9fc9cc464ef78d2242b 334 Pfam PF00072 Response regulator receiver domain 5 115 1.8E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS14785 278646d63f51c9fc9cc464ef78d2242b 334 Gene3D G3DSA:3.40.50.2300 4 118 1.1E-27 T 11-11-2016 S40542_RS14785 278646d63f51c9fc9cc464ef78d2242b 334 SUPERFAMILY SSF103039 139 328 5.58E-46 T 11-11-2016 IPR028976 CheC-like domain S40542_RS14930 9721c623c41a71474f5679a9478cd772 256 Pfam PF11932 Protein of unknown function (DUF3450) 14 252 3.8E-88 T 11-11-2016 IPR016866 Uncharacterised conserved protein UCP028069 S40542_RS14930 9721c623c41a71474f5679a9478cd772 256 PIRSF PIRSF028069 5 256 7.7E-85 T 11-11-2016 IPR016866 Uncharacterised conserved protein UCP028069 S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 Pfam PF00772 DnaB-like helicase N terminal domain 14 115 2.5E-38 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 Gene3D G3DSA:3.40.50.300 177 451 1.7E-106 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 Gene3D G3DSA:1.10.860.10 14 116 2.3E-41 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 14 451 5.4E-179 T 11-11-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 SUPERFAMILY SSF48024 12 123 9.68E-40 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 Pfam PF03796 DnaB-like helicase C terminal domain 193 449 3.3E-115 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 SMART SM00382 210 416 0.0092 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 SUPERFAMILY SSF52540 191 262 1.12E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01750 a9861ad86ba37cb86199e613d17f2859 459 SUPERFAMILY SSF52540 289 442 1.12E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS23510 6f2dbf359b3ac95ff7a87c31d0ca8e07 37 SUPERFAMILY SSF56300 1 36 3.67E-5 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS23510 6f2dbf359b3ac95ff7a87c31d0ca8e07 37 Gene3D G3DSA:3.60.21.10 1 37 3.8E-5 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS05545 c737c5d0f40f35a96fbb3d89af7cf890 347 Gene3D G3DSA:3.20.20.70 2 341 6.4E-115 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS05545 c737c5d0f40f35a96fbb3d89af7cf890 347 SUPERFAMILY SSF51395 3 336 4.28E-107 T 11-11-2016 S40542_RS05545 c737c5d0f40f35a96fbb3d89af7cf890 347 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 335 3.1E-84 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 S40542_RS18775 0f612ba95fb497353ab7f0b4173f55db 107 Pfam PF04999 Cell division protein FtsL 17 105 2.9E-28 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 S40542_RS18775 0f612ba95fb497353ab7f0b4173f55db 107 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 104 1.1E-19 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 S40542_RS18775 0f612ba95fb497353ab7f0b4173f55db 107 Hamap MF_00910 Cell division protein FtsL [ftsL]. 21 104 15.147 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 146 169 - T 11-11-2016 IPR025505 FHIPEP conserved site S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 Pfam PF00771 FHIPEP family 31 689 5.7E-267 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 697 1.4E-259 T 11-11-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 3.3E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 3.3E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 3.3E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 3.3E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 3.3E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 3.3E-55 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 S40542_RS06440 f6dbc1b914768d7b9748ce27d2e8afbc 699 PIRSF PIRSF005419 5 699 8.4E-247 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 S40542_RS02990 ae8a54171c3d642a9cc36c51530ebf99 261 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 248 1.4E-72 T 11-11-2016 IPR005226 UPF0014 family S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 Gene3D G3DSA:3.30.930.10 4 214 3.6E-105 T 11-11-2016 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 290 9.7E-152 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 1.1E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 1.1E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 1.1E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 1.1E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 1.1E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 1.1E-69 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 298 3.3E-169 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 SUPERFAMILY SSF55681 8 290 8.08E-136 T 11-11-2016 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 291 61.269 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 S40542_RS00025 6d49c6fa7ec4551da6ef021dde47ea5d 299 Gene3D G3DSA:1.20.58.180 215 296 1.4E-38 T 11-11-2016 S40542_RS03900 414e1f923a3aa90fcd24ceafaf734f9b 343 Pfam PF03150 Di-haem cytochrome c peroxidase 69 214 1.9E-43 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 S40542_RS03900 414e1f923a3aa90fcd24ceafaf734f9b 343 SUPERFAMILY SSF46626 203 337 2.36E-33 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS03900 414e1f923a3aa90fcd24ceafaf734f9b 343 SUPERFAMILY SSF46626 56 201 5.5E-40 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS03900 414e1f923a3aa90fcd24ceafaf734f9b 343 Pfam PF00034 Cytochrome c 222 331 3.5E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS03900 414e1f923a3aa90fcd24ceafaf734f9b 343 Gene3D G3DSA:1.10.760.10 66 205 8.1E-43 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS03900 414e1f923a3aa90fcd24ceafaf734f9b 343 Gene3D G3DSA:1.10.760.10 206 335 6.7E-40 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS03900 414e1f923a3aa90fcd24ceafaf734f9b 343 PIRSF PIRSF000294 12 341 7.7E-89 T 11-11-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 S40542_RS02100 b5743334a508351f0a199efc989787e5 246 Gene3D G3DSA:2.10.70.20 155 202 5.0E-13 T 11-11-2016 S40542_RS02100 b5743334a508351f0a199efc989787e5 246 Gene3D G3DSA:3.10.610.10 41 153 7.7E-36 T 11-11-2016 S40542_RS02100 b5743334a508351f0a199efc989787e5 246 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 29 1.0E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS02100 b5743334a508351f0a199efc989787e5 246 Pfam PF11612 Type II secretion system (T2SS), protein J 61 198 1.4E-38 T 11-11-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 S40542_RS02100 b5743334a508351f0a199efc989787e5 246 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 10 200 7.5E-50 T 11-11-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 S40542_RS02100 b5743334a508351f0a199efc989787e5 246 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 29 5.2E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS02100 b5743334a508351f0a199efc989787e5 246 SUPERFAMILY SSF54523 42 202 5.1E-47 T 11-11-2016 S40542_RS08265 31072fe6f549f2247d097570d455234f 500 Pfam PF01381 Helix-turn-helix 18 79 1.1E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS08265 31072fe6f549f2247d097570d455234f 500 SMART SM00530 17 79 4.4E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS08265 31072fe6f549f2247d097570d455234f 500 SUPERFAMILY SSF47413 11 87 3.38E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS08265 31072fe6f549f2247d097570d455234f 500 Pfam PF12268 Protein of unknown function (DUF3612) 324 498 6.0E-96 T 11-11-2016 IPR022055 Protein of unknown function DUF3612 S40542_RS08265 31072fe6f549f2247d097570d455234f 500 Gene3D G3DSA:1.10.260.40 14 104 3.1E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS09845 a94d6130719c15dab048480d9d41c417 365 Gene3D G3DSA:3.40.640.10 48 266 9.3E-52 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS09845 a94d6130719c15dab048480d9d41c417 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 362 1.5E-86 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 S40542_RS09845 a94d6130719c15dab048480d9d41c417 365 Gene3D G3DSA:3.90.1150.10 267 364 1.2E-19 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS09845 a94d6130719c15dab048480d9d41c417 365 SUPERFAMILY SSF53383 22 363 1.27E-65 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS09845 a94d6130719c15dab048480d9d41c417 365 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 S40542_RS09845 a94d6130719c15dab048480d9d41c417 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 363 45.942 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 S40542_RS09845 a94d6130719c15dab048480d9d41c417 365 Pfam PF00155 Aminotransferase class I and II 36 359 4.0E-45 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS19345 4f7c6c7b78eefb0ca0932f09fba4f46f 338 Gene3D G3DSA:3.90.25.10 180 232 5.7E-52 T 11-11-2016 S40542_RS19345 4f7c6c7b78eefb0ca0932f09fba4f46f 338 Gene3D G3DSA:3.90.25.10 264 336 5.7E-52 T 11-11-2016 S40542_RS19345 4f7c6c7b78eefb0ca0932f09fba4f46f 338 Gene3D G3DSA:3.40.50.720 1 179 1.1E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19345 4f7c6c7b78eefb0ca0932f09fba4f46f 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 3.0E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS19345 4f7c6c7b78eefb0ca0932f09fba4f46f 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 6.7E-141 T 11-11-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 S40542_RS19345 4f7c6c7b78eefb0ca0932f09fba4f46f 338 SUPERFAMILY SSF51735 1 336 4.6E-98 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00385 690cab51fd2a6a5f8918d47b906766ee 241 SMART SM00382 33 222 8.7E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS00385 690cab51fd2a6a5f8918d47b906766ee 241 SUPERFAMILY SSF52540 4 226 5.59E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00385 690cab51fd2a6a5f8918d47b906766ee 241 Gene3D G3DSA:3.40.50.300 2 224 4.9E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00385 690cab51fd2a6a5f8918d47b906766ee 241 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS00385 690cab51fd2a6a5f8918d47b906766ee 241 Pfam PF00005 ABC transporter 24 174 2.3E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS04005 a6377d195aa4def5e61b03205febeb41 373 SUPERFAMILY SSF56014 265 360 9.0E-14 T 11-11-2016 S40542_RS04005 a6377d195aa4def5e61b03205febeb41 373 SUPERFAMILY SSF51717 16 208 4.16E-12 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 S40542_RS04005 a6377d195aa4def5e61b03205febeb41 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 353 1.2E-128 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 S40542_RS04005 a6377d195aa4def5e61b03205febeb41 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 35.386 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 S40542_RS04005 a6377d195aa4def5e61b03205febeb41 373 Pfam PF04551 GcpE protein 13 354 1.0E-134 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 S40542_RS04005 a6377d195aa4def5e61b03205febeb41 373 PIRSF PIRSF004640 1 364 2.9E-148 T 11-11-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 S40542_RS04005 a6377d195aa4def5e61b03205febeb41 373 Gene3D G3DSA:3.20.20.70 29 132 1.5E-10 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 35.111 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 SUPERFAMILY SSF54211 81 160 7.08E-27 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 2.1E-30 T 11-11-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 SUPERFAMILY SSF54768 10 78 2.72E-23 T 11-11-2016 S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 76 3.3E-28 T 11-11-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 Gene3D G3DSA:3.30.230.10 79 160 8.7E-34 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 11-11-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 165 5.6E-69 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 S40542_RS00955 efed540cab581e5a19e25289ca73f67c 168 Gene3D G3DSA:3.30.160.20 11 74 5.7E-30 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain S40542_RS00100 8c62c1754f3eab03acd3d8adb739da45 370 Gene3D G3DSA:3.10.350.10 31 79 1.7E-8 T 11-11-2016 IPR018392 LysM domain S40542_RS00100 8c62c1754f3eab03acd3d8adb739da45 370 SUPERFAMILY SSF54106 31 79 6.8E-8 T 11-11-2016 IPR018392 LysM domain S40542_RS00100 8c62c1754f3eab03acd3d8adb739da45 370 Pfam PF01476 LysM domain 33 78 2.4E-12 T 11-11-2016 IPR018392 LysM domain S40542_RS00100 8c62c1754f3eab03acd3d8adb739da45 370 SMART SM00257 32 80 2.4E-5 T 11-11-2016 IPR018392 LysM domain S40542_RS14710 2e6f439633015b112cb363225b59b599 265 Pfam PF01435 Peptidase family M48 58 242 5.5E-38 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 S40542_RS14710 2e6f439633015b112cb363225b59b599 265 Gene3D G3DSA:3.30.2010.10 53 139 1.3E-18 T 11-11-2016 S40542_RS11680 1c8ed1742edba148c005edf37c5233d0 70 Pfam PF04077 DsrH like protein 3 66 1.7E-6 T 11-11-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 S40542_RS11680 1c8ed1742edba148c005edf37c5233d0 70 SUPERFAMILY SSF75169 2 70 2.21E-12 T 11-11-2016 IPR027396 DsrEFH-like S40542_RS11680 1c8ed1742edba148c005edf37c5233d0 70 Gene3D G3DSA:3.40.1260.10 3 68 3.2E-8 T 11-11-2016 IPR027396 DsrEFH-like S40542_RS02080 3314a754627e7eecfd1e869be2d7f6a4 408 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 406 3.7E-152 T 11-11-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 S40542_RS02080 3314a754627e7eecfd1e869be2d7f6a4 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 11-11-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 S40542_RS02080 3314a754627e7eecfd1e869be2d7f6a4 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 1.0E-33 T 11-11-2016 IPR003004 GspF/PilC family S40542_RS02080 3314a754627e7eecfd1e869be2d7f6a4 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 1.0E-33 T 11-11-2016 IPR003004 GspF/PilC family S40542_RS02080 3314a754627e7eecfd1e869be2d7f6a4 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 1.0E-33 T 11-11-2016 IPR003004 GspF/PilC family S40542_RS02080 3314a754627e7eecfd1e869be2d7f6a4 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 1.0E-33 T 11-11-2016 IPR003004 GspF/PilC family S40542_RS02080 3314a754627e7eecfd1e869be2d7f6a4 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 7.9E-31 T 11-11-2016 IPR018076 Type II secretion system F domain S40542_RS02080 3314a754627e7eecfd1e869be2d7f6a4 408 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 1.5E-25 T 11-11-2016 IPR018076 Type II secretion system F domain S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 26 626 1.3E-154 T 11-11-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 Pfam PF13604 AAA domain 171 332 2.6E-29 T 11-11-2016 S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 Gene3D G3DSA:3.40.50.300 425 513 9.0E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 28 624 47.378 T 11-11-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 Pfam PF13538 UvrD-like helicase C-terminal domain 553 598 3.8E-13 T 11-11-2016 IPR027785 UvrD-like helicase C-terminal domain S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 SUPERFAMILY SSF52540 169 337 2.88E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 SUPERFAMILY SSF52540 372 607 2.88E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 Gene3D G3DSA:3.40.50.300 160 335 1.1E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 Gene3D G3DSA:3.40.50.300 372 402 1.1E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14555 8d82f7915bf56a5403b24dfce3791dba 629 Gene3D G3DSA:3.40.50.300 514 605 3.5E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15715 e79a18905bebd6c3929b7448d3e12cd6 266 Gene3D G3DSA:3.40.50.2300 143 265 2.3E-33 T 11-11-2016 S40542_RS15715 e79a18905bebd6c3929b7448d3e12cd6 266 SUPERFAMILY SSF52172 8 131 2.7E-22 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15715 e79a18905bebd6c3929b7448d3e12cd6 266 SMART SM00448 145 259 1.7E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15715 e79a18905bebd6c3929b7448d3e12cd6 266 SMART SM00448 9 123 5.3E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15715 e79a18905bebd6c3929b7448d3e12cd6 266 SUPERFAMILY SSF52172 143 264 3.27E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15715 e79a18905bebd6c3929b7448d3e12cd6 266 Gene3D G3DSA:3.40.50.2300 8 128 6.1E-20 T 11-11-2016 S40542_RS15715 e79a18905bebd6c3929b7448d3e12cd6 266 Pfam PF00072 Response regulator receiver domain 11 124 1.5E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15715 e79a18905bebd6c3929b7448d3e12cd6 266 Pfam PF00072 Response regulator receiver domain 147 257 1.7E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07075 247d136c5384012767a1cf7007eeff07 496 Gene3D G3DSA:1.20.1250.20 305 492 1.5E-13 T 11-11-2016 S40542_RS07075 247d136c5384012767a1cf7007eeff07 496 Gene3D G3DSA:1.20.1250.20 11 216 1.4E-25 T 11-11-2016 S40542_RS07075 247d136c5384012767a1cf7007eeff07 496 SUPERFAMILY SSF103473 1 219 1.7E-39 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS07075 247d136c5384012767a1cf7007eeff07 496 SUPERFAMILY SSF103473 285 491 1.7E-39 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS07075 247d136c5384012767a1cf7007eeff07 496 Pfam PF07690 Major Facilitator Superfamily 17 454 1.3E-22 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS05845 151e604b9f47104f91f2d7482117f9e7 392 Gene3D G3DSA:1.20.1250.20 10 189 7.7E-27 T 11-11-2016 S40542_RS05845 151e604b9f47104f91f2d7482117f9e7 392 Gene3D G3DSA:1.20.1250.20 209 381 3.7E-7 T 11-11-2016 S40542_RS05845 151e604b9f47104f91f2d7482117f9e7 392 SUPERFAMILY SSF103473 7 382 7.98E-53 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS05845 151e604b9f47104f91f2d7482117f9e7 392 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 S40542_RS05845 151e604b9f47104f91f2d7482117f9e7 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 357 6.5E-68 T 11-11-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 S40542_RS05845 151e604b9f47104f91f2d7482117f9e7 392 Pfam PF07690 Major Facilitator Superfamily 13 350 1.0E-39 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS15540 5611a47c89fa26e8f476a1de93efb1a5 396 SUPERFAMILY SSF48452 208 373 3.6E-26 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS15540 5611a47c89fa26e8f476a1de93efb1a5 396 Gene3D G3DSA:1.25.40.10 207 376 4.5E-31 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS15540 5611a47c89fa26e8f476a1de93efb1a5 396 Pfam PF00515 Tetratricopeptide repeat 243 275 2.2E-7 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 S40542_RS15540 5611a47c89fa26e8f476a1de93efb1a5 396 SMART SM00028 344 377 27.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15540 5611a47c89fa26e8f476a1de93efb1a5 396 SMART SM00028 208 241 0.16 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15540 5611a47c89fa26e8f476a1de93efb1a5 396 SMART SM00028 242 275 2.4E-6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15540 5611a47c89fa26e8f476a1de93efb1a5 396 SMART SM00028 310 343 0.71 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS15540 5611a47c89fa26e8f476a1de93efb1a5 396 Pfam PF13414 TPR repeat 317 358 1.9E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Gene3D G3DSA:1.10.150.20 505 585 6.1E-31 T 11-11-2016 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Gene3D G3DSA:3.40.50.10190 592 670 5.0E-24 T 11-11-2016 IPR001357 BRCT domain S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 666 4.0E-11 T 11-11-2016 IPR001357 BRCT domain S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-11-2016 IPR018239 NAD-dependent DNA ligase, active site S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 11-11-2016 IPR033136 NAD-dependent DNA ligase, conserved site S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Gene3D G3DSA:3.30.470.30 120 253 1.2E-52 T 11-11-2016 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Gene3D G3DSA:1.10.150.20 436 503 6.2E-25 T 11-11-2016 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Gene3D G3DSA:2.40.50.140 320 392 8.3E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 319 6.2E-134 T 11-11-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SMART SM00278 481 500 150.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SMART SM00278 447 466 93.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SMART SM00278 545 564 380.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SMART SM00278 513 532 98.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 663 5.4E-262 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SUPERFAMILY SSF50249 319 400 3.77E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SUPERFAMILY SSF52113 592 670 8.97E-18 T 11-11-2016 IPR001357 BRCT domain S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 9.2E-35 T 11-11-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 5.1E-11 T 11-11-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Gene3D G3DSA:1.10.287.610 3 67 2.1E-26 T 11-11-2016 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Pfam PF12826 Helix-hairpin-helix motif 511 574 1.8E-22 T 11-11-2016 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SUPERFAMILY SSF47781 405 585 1.63E-60 T 11-11-2016 IPR010994 RuvA domain 2-like S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SMART SM00532 4 449 2.4E-275 T 11-11-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Hamap MF_01588 DNA ligase [ligA]. 3 668 53.345 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SMART SM00292 594 671 3.9E-11 T 11-11-2016 IPR001357 BRCT domain S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 PIRSF PIRSF001604 1 673 9.3E-255 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 SUPERFAMILY SSF56091 4 317 3.84E-121 T 11-11-2016 S40542_RS17530 9cce8007f219c49226de5ebf6e2c4889 673 Pfam PF14520 Helix-hairpin-helix domain 447 502 6.9E-5 T 11-11-2016 S40542_RS19355 8520cfb853837f5ea037860a37a7b7f0 299 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.3E-64 T 11-11-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 S40542_RS19355 8520cfb853837f5ea037860a37a7b7f0 299 Gene3D G3DSA:3.40.50.300 1 287 1.2E-121 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19355 8520cfb853837f5ea037860a37a7b7f0 299 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 S40542_RS19355 8520cfb853837f5ea037860a37a7b7f0 299 PRINTS PR00478 Phosphoribulokinase family signature 12 29 3.4E-27 T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 S40542_RS19355 8520cfb853837f5ea037860a37a7b7f0 299 PRINTS PR00478 Phosphoribulokinase family signature 164 181 3.4E-27 T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 S40542_RS19355 8520cfb853837f5ea037860a37a7b7f0 299 PRINTS PR00478 Phosphoribulokinase family signature 126 144 3.4E-27 T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 S40542_RS19355 8520cfb853837f5ea037860a37a7b7f0 299 PRINTS PR00478 Phosphoribulokinase family signature 182 205 3.4E-27 T 11-11-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 S40542_RS19355 8520cfb853837f5ea037860a37a7b7f0 299 SUPERFAMILY SSF52540 3 286 2.77E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17410 171d8090f8ed12e59738d5ea87ac520e 235 Gene3D G3DSA:1.10.10.60 178 232 8.0E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS17410 171d8090f8ed12e59738d5ea87ac520e 235 SUPERFAMILY SSF46689 179 231 1.97E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS17410 171d8090f8ed12e59738d5ea87ac520e 235 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 180 225 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS17410 171d8090f8ed12e59738d5ea87ac520e 235 SMART SM00342 142 229 1.2E-13 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS17410 171d8090f8ed12e59738d5ea87ac520e 235 Pfam PF12833 Helix-turn-helix domain 163 231 9.3E-13 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS18740 af6094e94eb668f601bf3cf622efb876 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 179 345 3.4E-38 T 11-11-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 S40542_RS18740 af6094e94eb668f601bf3cf622efb876 354 SUPERFAMILY SSF53756 3 352 2.51E-111 T 11-11-2016 S40542_RS18740 af6094e94eb668f601bf3cf622efb876 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 2.7E-44 T 11-11-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS18740 af6094e94eb668f601bf3cf622efb876 354 Gene3D G3DSA:3.40.50.2000 2 191 8.3E-68 T 11-11-2016 S40542_RS18740 af6094e94eb668f601bf3cf622efb876 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 353 34.909 T 11-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS18740 af6094e94eb668f601bf3cf622efb876 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 349 3.1E-97 T 11-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 S40542_RS14145 ba76f39f83c04f9581b6fbb25000e455 1090 Gene3D G3DSA:2.130.10.140 511 738 6.1E-60 T 11-11-2016 S40542_RS14145 ba76f39f83c04f9581b6fbb25000e455 1090 Gene3D G3DSA:2.130.10.140 346 470 6.1E-60 T 11-11-2016 S40542_RS14145 ba76f39f83c04f9581b6fbb25000e455 1090 Gene3D G3DSA:2.130.10.140 51 345 5.0E-83 T 11-11-2016 S40542_RS14145 ba76f39f83c04f9581b6fbb25000e455 1090 Pfam PF15902 Sortilin, neurotensin receptor 3, 290 394 1.2E-9 T 11-11-2016 IPR031778 Sortilin, N-terminal S40542_RS14145 ba76f39f83c04f9581b6fbb25000e455 1090 Pfam PF15902 Sortilin, neurotensin receptor 3, 130 256 2.3E-11 T 11-11-2016 IPR031778 Sortilin, N-terminal S40542_RS14145 ba76f39f83c04f9581b6fbb25000e455 1090 SUPERFAMILY SSF50939 496 762 4.12E-39 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 S40542_RS14145 ba76f39f83c04f9581b6fbb25000e455 1090 SUPERFAMILY SSF50939 176 419 7.85E-63 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 S40542_RS14145 ba76f39f83c04f9581b6fbb25000e455 1090 SUPERFAMILY SSF50939 38 145 7.85E-63 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 S40542_RS20200 caa2004db7adc332c333bbdbc94e1268 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 343 1.3E-41 T 11-11-2016 IPR000160 GGDEF domain S40542_RS20200 caa2004db7adc332c333bbdbc94e1268 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 345 1.3E-43 T 11-11-2016 IPR000160 GGDEF domain S40542_RS20200 caa2004db7adc332c333bbdbc94e1268 355 SMART SM00267 178 347 3.2E-50 T 11-11-2016 IPR000160 GGDEF domain S40542_RS20200 caa2004db7adc332c333bbdbc94e1268 355 SUPERFAMILY SSF55073 194 344 3.22E-41 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS20200 caa2004db7adc332c333bbdbc94e1268 355 Gene3D G3DSA:3.30.70.270 192 345 1.2E-44 T 11-11-2016 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 SUPERFAMILY SSF53649 492 553 4.51E-108 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 SUPERFAMILY SSF53649 38 432 4.51E-108 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 SMART SM00098 49 553 1.1E-51 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 Pfam PF00245 Alkaline phosphatase 49 444 1.8E-77 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 PRINTS PR00113 Alkaline phosphatase signature 297 326 1.6E-33 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 PRINTS PR00113 Alkaline phosphatase signature 48 68 1.6E-33 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 PRINTS PR00113 Alkaline phosphatase signature 194 204 1.6E-33 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 PRINTS PR00113 Alkaline phosphatase signature 149 169 1.6E-33 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 ProSitePatterns PS00123 Alkaline phosphatase active site. 112 120 - T 11-11-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 Gene3D G3DSA:3.40.720.10 35 432 3.8E-124 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 S40542_RS18795 210f20291f74ee1d728a1d17b43d48c8 554 Gene3D G3DSA:3.40.720.10 492 553 3.8E-124 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 S40542_RS08310 ca5a58654a4f18d23ab636eba75ea6bf 85 Pfam PF01381 Helix-turn-helix 23 65 1.3E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS08310 ca5a58654a4f18d23ab636eba75ea6bf 85 Gene3D G3DSA:1.10.260.40 19 71 7.4E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS08310 ca5a58654a4f18d23ab636eba75ea6bf 85 SMART SM00530 22 77 2.9E-7 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS08310 ca5a58654a4f18d23ab636eba75ea6bf 85 SUPERFAMILY SSF47413 16 73 4.29E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 367 2.9E-58 T 11-11-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 Gene3D G3DSA:3.40.430.10 133 368 5.3E-62 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 103 4.6E-22 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 SUPERFAMILY SSF53597 148 366 1.06E-54 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 Gene3D G3DSA:3.40.140.10 7 132 1.7E-34 T 11-11-2016 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 365 1.8E-124 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 PIRSF PIRSF006769 2 371 9.3E-123 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 SUPERFAMILY SSF53927 7 148 1.27E-46 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 S40542_RS05470 95bc5c33edf916b1c1d3cb553b5cc1fb 371 Pfam PF01872 RibD C-terminal domain 151 364 1.2E-49 T 11-11-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 Pfam PF06827 Zinc finger found in FPG and IleRS 904 930 2.2E-8 T 11-11-2016 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 2.7E-294 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 SUPERFAMILY SSF47323 658 933 1.05E-74 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 647 6.2E-226 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 Gene3D G3DSA:1.10.730.10 648 793 1.9E-42 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 1.9E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 1.9E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.9E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 1.9E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 407 422 1.9E-32 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 Gene3D G3DSA:3.90.740.10 206 395 2.8E-54 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 SUPERFAMILY SSF52374 409 653 3.49E-143 T 11-11-2016 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 SUPERFAMILY SSF52374 3 202 3.49E-143 T 11-11-2016 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 Gene3D G3DSA:3.40.50.620 17 205 1.4E-140 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 Gene3D G3DSA:3.40.50.620 409 643 1.4E-140 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 SUPERFAMILY SSF50677 204 409 1.15E-51 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 Pfam PF08264 Anticodon-binding domain of tRNA 691 846 5.9E-27 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 S40542_RS15955 16c4c864857db6ae50b8cffd069ceb1c 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.483 T 11-11-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 S40542_RS24615 9a2bf0b707885cd2387cb726376df2f5 138 SUPERFAMILY SSF53639 2 121 1.08E-26 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS24615 9a2bf0b707885cd2387cb726376df2f5 138 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 2 100 1.4E-17 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS24615 9a2bf0b707885cd2387cb726376df2f5 138 Gene3D G3DSA:3.40.225.10 2 126 7.4E-28 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS06200 b22b1156ef5c227f970db0157d6cf862 85 Gene3D G3DSA:1.10.1200.10 6 82 1.4E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS06200 b22b1156ef5c227f970db0157d6cf862 85 Pfam PF00550 Phosphopantetheine attachment site 26 75 3.5E-5 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS06200 b22b1156ef5c227f970db0157d6cf862 85 SUPERFAMILY SSF47336 7 82 2.62E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS04000 ccaba2ca252b60fbd0328f12a385e3dc 329 Pfam PF13464 Domain of unknown function (DUF4115) 252 325 1.0E-17 T 11-11-2016 IPR025194 Domain of unknown function DUF4115 S40542_RS04000 ccaba2ca252b60fbd0328f12a385e3dc 329 Pfam PF13413 Helix-turn-helix domain 19 79 4.4E-18 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS04000 ccaba2ca252b60fbd0328f12a385e3dc 329 Gene3D G3DSA:1.10.260.40 8 80 2.9E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS04000 ccaba2ca252b60fbd0328f12a385e3dc 329 SUPERFAMILY SSF47413 13 86 3.38E-5 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS17390 1c57d2d097f057e91485bdef85e375e4 212 SMART SM00900 101 193 7.3E-27 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 S40542_RS17390 1c57d2d097f057e91485bdef85e375e4 212 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 3 195 23.733 T 11-11-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 S40542_RS17390 1c57d2d097f057e91485bdef85e375e4 212 PIRSF PIRSF006091 1 207 7.3E-70 T 11-11-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 S40542_RS17390 1c57d2d097f057e91485bdef85e375e4 212 Pfam PF04205 FMN-binding domain 101 189 1.7E-16 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 S40542_RS17390 1c57d2d097f057e91485bdef85e375e4 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 11 192 4.4E-57 T 11-11-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 S40542_RS08440 ad8a50a438b3bcbca1b1d68bda505ec4 348 SUPERFAMILY SSF52317 1 165 1.42E-37 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS08440 ad8a50a438b3bcbca1b1d68bda505ec4 348 SUPERFAMILY SSF141986 203 338 4.58E-23 T 11-11-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain S40542_RS08440 ad8a50a438b3bcbca1b1d68bda505ec4 348 Gene3D G3DSA:3.40.50.10740 1 159 8.8E-39 T 11-11-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain S40542_RS08440 ad8a50a438b3bcbca1b1d68bda505ec4 348 Gene3D G3DSA:3.50.30.60 205 340 2.0E-26 T 11-11-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain S40542_RS08440 ad8a50a438b3bcbca1b1d68bda505ec4 348 Pfam PF02016 LD-carboxypeptidase 13 331 3.2E-65 T 11-11-2016 IPR003507 Peptidase family S66 S40542_RS08440 ad8a50a438b3bcbca1b1d68bda505ec4 348 PIRSF PIRSF028757 1 347 1.3E-58 T 11-11-2016 IPR003507 Peptidase family S66 S40542_RS02470 679dc06e99433640d9508b23cab29c93 217 SUPERFAMILY SSF55120 7 216 7.04E-65 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS02470 679dc06e99433640d9508b23cab29c93 217 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 215 5.2E-62 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS02470 679dc06e99433640d9508b23cab29c93 217 Pfam PF00849 RNA pseudouridylate synthase 21 167 1.4E-29 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS18045 a02c87a8ed3180ef6d198556a735a796 276 Gene3D G3DSA:3.40.50.150 40 238 2.6E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18045 a02c87a8ed3180ef6d198556a735a796 276 SUPERFAMILY SSF53335 58 243 4.54E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18045 a02c87a8ed3180ef6d198556a735a796 276 PIRSF PIRSF031679 2 276 2.7E-100 T 11-11-2016 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted S40542_RS18045 a02c87a8ed3180ef6d198556a735a796 276 Pfam PF13489 Methyltransferase domain 51 225 2.8E-7 T 11-11-2016 S40542_RS00770 7ebfd1750b83b3c2c129d813e24be769 70 Hamap MF_00715 Protein SlyX [slyX]. 3 70 15.388 T 11-11-2016 IPR007236 SlyX S40542_RS00770 7ebfd1750b83b3c2c129d813e24be769 70 Gene3D G3DSA:1.20.5.300 2 49 2.1E-16 T 11-11-2016 S40542_RS00770 7ebfd1750b83b3c2c129d813e24be769 70 Pfam PF04102 SlyX 4 70 1.3E-20 T 11-11-2016 IPR007236 SlyX S40542_RS05055 b668992a8368cc6e4af99baf75c4e350 489 SUPERFAMILY SSF52317 250 447 2.37E-35 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS05055 b668992a8368cc6e4af99baf75c4e350 489 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 489 191.08 T 11-11-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 S40542_RS05055 b668992a8368cc6e4af99baf75c4e350 489 Gene3D G3DSA:3.40.50.300 1 235 5.3E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05055 b668992a8368cc6e4af99baf75c4e350 489 SUPERFAMILY SSF52540 1 236 4.98E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05055 b668992a8368cc6e4af99baf75c4e350 489 Gene3D G3DSA:3.40.50.880 249 447 9.8E-25 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS05055 b668992a8368cc6e4af99baf75c4e350 489 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 228 6.9E-27 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain S40542_RS05055 b668992a8368cc6e4af99baf75c4e350 489 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 483 1.4E-149 T 11-11-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 S40542_RS05055 b668992a8368cc6e4af99baf75c4e350 489 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 437 3.3E-56 T 11-11-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 SUPERFAMILY SSF117281 16 181 1.57E-22 T 11-11-2016 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 Pfam PF01344 Kelch motif 104 154 3.5E-6 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 Pfam PF01344 Kelch motif 260 311 3.7E-11 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 Pfam PF01344 Kelch motif 209 256 3.7E-12 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 SUPERFAMILY SSF117281 135 335 3.79E-45 T 11-11-2016 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 Gene3D G3DSA:2.120.10.80 135 334 2.0E-44 T 11-11-2016 IPR015915 Kelch-type beta propeller GO:0005515 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 SMART SM00612 270 324 5.0E-9 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 SMART SM00612 116 167 0.65 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 SMART SM00612 61 115 0.81 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 S40542_RS07245 9a341090e82c76e00c4f46ed96921e64 352 SMART SM00612 220 269 4.7E-7 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 S40542_RS03765 f2769497686fd6643850d82ef49e62de 380 SUPERFAMILY SSF56496 172 232 5.23E-13 T 11-11-2016 IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain S40542_RS03765 f2769497686fd6643850d82ef49e62de 380 Gene3D G3DSA:3.90.215.10 166 224 4.0E-13 T 11-11-2016 IPR014716 Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 S40542_RS03765 f2769497686fd6643850d82ef49e62de 380 Gene3D G3DSA:2.60.120.40 36 145 1.6E-5 T 11-11-2016 IPR008983 Tumour necrosis factor-like domain GO:0005515 S40542_RS03765 f2769497686fd6643850d82ef49e62de 380 Pfam PF00147 Fibrinogen beta and gamma chains, C-terminal globular domain 175 225 4.6E-8 T 11-11-2016 IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain S40542_RS00765 0323caabb42d754ff2cd66a320a5b986 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 3.5E-25 T 11-11-2016 IPR012658 Conserved hypothetical protein CHP02443 S40542_RS00765 0323caabb42d754ff2cd66a320a5b986 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 3 56 3.7E-19 T 11-11-2016 IPR012658 Conserved hypothetical protein CHP02443 S40542_RS04825 e3a1292e3742d179bac66ab370ed9634 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 265 16.665 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 S40542_RS04825 e3a1292e3742d179bac66ab370ed9634 267 Pfam PF02673 Bacitracin resistance protein BacA 7 259 2.8E-70 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 S40542_RS04825 e3a1292e3742d179bac66ab370ed9634 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 258 4.2E-66 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 S40542_RS05915 5c031e5cf9638c6c20c65b5e2fab953f 685 Gene3D G3DSA:2.60.40.1120 4 72 2.3E-7 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain S40542_RS05915 5c031e5cf9638c6c20c65b5e2fab953f 685 SUPERFAMILY SSF49464 4 71 3.33E-7 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain S40542_RS05915 5c031e5cf9638c6c20c65b5e2fab953f 685 SMART SM00854 79 343 1.0E-46 T 11-11-2016 IPR019079 Capsule synthesis protein, CapA S40542_RS05915 5c031e5cf9638c6c20c65b5e2fab953f 685 Pfam PF08308 PEGA domain 12 69 2.9E-6 T 11-11-2016 IPR013229 PEGA S40542_RS05915 5c031e5cf9638c6c20c65b5e2fab953f 685 Gene3D G3DSA:3.60.21.30 121 326 1.1E-8 T 11-11-2016 S40542_RS05915 5c031e5cf9638c6c20c65b5e2fab953f 685 SUPERFAMILY SSF56300 79 87 4.62E-25 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS05915 5c031e5cf9638c6c20c65b5e2fab953f 685 SUPERFAMILY SSF56300 117 355 4.62E-25 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS05915 5c031e5cf9638c6c20c65b5e2fab953f 685 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 79 343 8.9E-49 T 11-11-2016 IPR019079 Capsule synthesis protein, CapA S40542_RS02280 eca00aa58ba9ec76aafad84fdfcc00ad 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 301 2.1E-34 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 S40542_RS19460 9165f0a77bf58938cea59b11de074ff3 232 Pfam PF11769 Protein of unknown function (DUF3313) 16 220 7.2E-23 T 11-11-2016 IPR021747 Protein of unknown function DUF3313 S40542_RS04830 c960cb083d84a33e40716f513e718cae 179 SUPERFAMILY SSF55729 4 161 8.34E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS04830 c960cb083d84a33e40716f513e718cae 179 Pfam PF13302 Acetyltransferase (GNAT) domain 8 155 3.2E-29 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS04830 c960cb083d84a33e40716f513e718cae 179 Gene3D G3DSA:3.40.630.30 5 175 4.0E-36 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS19015 5c0c5476f9f2f6d7eeeb431c5c34a038 183 Gene3D G3DSA:2.60.450.10 55 175 1.3E-4 T 11-11-2016 S40542_RS19015 5c0c5476f9f2f6d7eeeb431c5c34a038 183 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 7 181 2.0E-42 T 11-11-2016 IPR010664 Lipopolysaccharide assembly, LptC-related S40542_RS19015 5c0c5476f9f2f6d7eeeb431c5c34a038 183 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 180 2.2E-44 T 11-11-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 S40542_RS19015 5c0c5476f9f2f6d7eeeb431c5c34a038 183 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 183 21.866 T 11-11-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 S40542_RS19015 5c0c5476f9f2f6d7eeeb431c5c34a038 183 PIRSF PIRSF028513 1 183 2.4E-43 T 11-11-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 S40542_RS08400 418121e73f947595f9e429dd8de15e51 373 Pfam PF13808 DDE_Tnp_1-associated 7 94 7.5E-34 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal S40542_RS08400 418121e73f947595f9e429dd8de15e51 373 Pfam PF01609 Transposase DDE domain 103 341 3.7E-23 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 S40542_RS08375 48c773294635448db404cfeec75e9afc 242 Pfam PF13683 Integrase core domain 170 235 3.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 S40542_RS08375 48c773294635448db404cfeec75e9afc 242 Gene3D G3DSA:3.30.420.10 79 236 1.8E-45 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS08375 48c773294635448db404cfeec75e9afc 242 SUPERFAMILY SSF53098 79 237 3.29E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS08375 48c773294635448db404cfeec75e9afc 242 Pfam PF13276 HTH-like domain 16 70 1.7E-8 T 11-11-2016 IPR025948 HTH-like domain S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 541 8.4E-50 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 Pfam PF08269 Cache domain 35 191 7.9E-36 T 11-11-2016 IPR004010 Double Cache domain 2 S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 SMART SM01049 39 126 9.4E-19 T 11-11-2016 IPR033480 Single Cache domain 2 S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 Gene3D G3DSA:3.30.450.20 31 183 1.4E-42 T 11-11-2016 S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 SUPERFAMILY SSF58104 234 543 1.31E-67 T 11-11-2016 S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 SMART SM00283 281 542 3.0E-58 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 Gene3D G3DSA:1.10.287.950 295 513 3.0E-52 T 11-11-2016 S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 Pfam PF00672 HAMP domain 198 256 1.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS13970 f1e3c4eee8e9c3f59640926afb5f84fd 543 SMART SM00304 213 266 2.8E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS06155 97adf114f969cfa0742e370d279e7984 473 Pfam PF07196 Flagellin hook IN motif 133 190 5.4E-10 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 S40542_RS06155 97adf114f969cfa0742e370d279e7984 473 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 110 3.0E-16 T 11-11-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 S40542_RS06155 97adf114f969cfa0742e370d279e7984 473 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 231 455 4.3E-29 T 11-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 Gene3D G3DSA:3.30.450.20 23 181 1.5E-28 T 11-11-2016 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 SUPERFAMILY SSF58104 237 543 1.83E-64 T 11-11-2016 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 6.2E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 187 207 6.2E-5 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 SMART SM00283 281 542 6.9E-60 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 Gene3D G3DSA:1.10.287.950 296 513 3.1E-51 T 11-11-2016 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 541 2.4E-45 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 SMART SM01049 34 128 4.2E-20 T 11-11-2016 IPR033480 Single Cache domain 2 S40542_RS18105 818a2edc934361f98bf1b8985627f326 543 Pfam PF17200 Single Cache domain 2 40 188 1.2E-30 T 11-11-2016 IPR033480 Single Cache domain 2 S40542_RS04360 97540c740cc216b9a974a592547dfa62 79 SMART SM00530 11 66 1.4E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS04360 97540c740cc216b9a974a592547dfa62 79 Gene3D G3DSA:1.10.260.40 2 72 1.5E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS04360 97540c740cc216b9a974a592547dfa62 79 Pfam PF01381 Helix-turn-helix 12 65 3.6E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS04360 97540c740cc216b9a974a592547dfa62 79 SUPERFAMILY SSF47413 3 69 1.25E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS13920 042540024f84016fcca6a131310d52ce 402 Pfam PF07690 Major Facilitator Superfamily 31 332 4.8E-18 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS13920 042540024f84016fcca6a131310d52ce 402 SUPERFAMILY SSF103473 16 401 7.98E-32 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS13920 042540024f84016fcca6a131310d52ce 402 Gene3D G3DSA:1.20.1250.20 16 205 3.9E-17 T 11-11-2016 S40542_RS13920 042540024f84016fcca6a131310d52ce 402 Gene3D G3DSA:1.20.1250.20 214 399 1.3E-10 T 11-11-2016 S40542_RS03570 d4bc7e7edfab33c317efa545b2cc7940 205 SMART SM00479 21 195 5.3E-17 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS03570 d4bc7e7edfab33c317efa545b2cc7940 205 SUPERFAMILY SSF53098 16 195 1.52E-34 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS03570 d4bc7e7edfab33c317efa545b2cc7940 205 Gene3D G3DSA:3.30.420.10 17 199 1.1E-35 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS03570 d4bc7e7edfab33c317efa545b2cc7940 205 Pfam PF00929 Exonuclease 23 186 1.8E-16 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS09305 5e373e1d0a3c10752053039f52aeca5b 181 Pfam PF01584 CheW-like domain 19 159 2.3E-24 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS09305 5e373e1d0a3c10752053039f52aeca5b 181 SMART SM00260 14 158 9.4E-10 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS09305 5e373e1d0a3c10752053039f52aeca5b 181 Gene3D G3DSA:2.40.50.180 56 91 4.6E-7 T 11-11-2016 S40542_RS09305 5e373e1d0a3c10752053039f52aeca5b 181 SUPERFAMILY SSF50341 14 159 4.19E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01590 c422ac8a9bf6648ff76af63045d2ce92 137 Gene3D G3DSA:3.30.300.20 35 132 6.0E-40 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS01590 c422ac8a9bf6648ff76af63045d2ce92 137 Gene3D G3DSA:2.20.25.10 1 33 8.3E-13 T 11-11-2016 S40542_RS01590 c422ac8a9bf6648ff76af63045d2ce92 137 Pfam PF02566 OsmC-like protein 31 127 4.3E-21 T 11-11-2016 IPR003718 OsmC/Ohr family S40542_RS01590 c422ac8a9bf6648ff76af63045d2ce92 137 SUPERFAMILY SSF82784 1 132 8.51E-42 T 11-11-2016 IPR003718 OsmC/Ohr family S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 31 571 2.9E-74 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 PRINTS PR01009 Flagellar M-ring protein signature 215 233 4.0E-22 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 PRINTS PR01009 Flagellar M-ring protein signature 140 158 4.0E-22 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 PRINTS PR01009 Flagellar M-ring protein signature 365 389 4.0E-22 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 PRINTS PR01009 Flagellar M-ring protein signature 285 303 4.0E-22 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 PRINTS PR01009 Flagellar M-ring protein signature 172 186 4.0E-22 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 Pfam PF08345 Flagellar M-ring protein C-terminal 274 441 8.5E-43 T 11-11-2016 IPR013556 Flagellar M-ring C-terminal S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 Pfam PF01514 Secretory protein of YscJ/FliF family 52 239 2.5E-55 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF S40542_RS06370 ea7002b30c8913d48a442543ee53e1de 572 PIRSF PIRSF004862 20 572 9.1E-131 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 89 2.1E-21 T 11-11-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 9 330 2.1E-112 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 107 135 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 Gene3D G3DSA:2.160.10.10 98 128 2.2E-7 T 11-11-2016 S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 Gene3D G3DSA:2.160.10.10 129 307 1.0E-40 T 11-11-2016 S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 126 3.1E-4 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 223 258 1.3E-4 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 180 7.9E-8 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 10 327 34.776 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 SUPERFAMILY SSF51161 35 318 7.08E-83 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS06665 4e224164154d73a08cb175b2b8c71fb2 346 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 S40542_RS02710 d734a9a4a339463e7923c5643ec4d181 422 Pfam PF13671 AAA domain 271 387 5.2E-19 T 11-11-2016 S40542_RS02710 d734a9a4a339463e7923c5643ec4d181 422 SUPERFAMILY SSF109604 46 150 2.67E-9 T 11-11-2016 S40542_RS02710 d734a9a4a339463e7923c5643ec4d181 422 SUPERFAMILY SSF52540 267 406 4.66E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02710 d734a9a4a339463e7923c5643ec4d181 422 Pfam PF01966 HD domain 65 151 1.3E-5 T 11-11-2016 IPR006674 HD domain S40542_RS02710 d734a9a4a339463e7923c5643ec4d181 422 Gene3D G3DSA:1.10.3210.10 43 148 4.6E-6 T 11-11-2016 IPR006674 HD domain S40542_RS02710 d734a9a4a339463e7923c5643ec4d181 422 Gene3D G3DSA:3.40.50.300 269 394 2.0E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00965 bdd461884437a25d45319c2e007b8adb 144 Gene3D G3DSA:3.100.10.10 32 143 2.2E-28 T 11-11-2016 S40542_RS00965 bdd461884437a25d45319c2e007b8adb 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 4.1E-31 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P S40542_RS00965 bdd461884437a25d45319c2e007b8adb 144 SUPERFAMILY SSF52080 4 143 4.19E-47 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P S40542_RS00965 bdd461884437a25d45319c2e007b8adb 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.8E-49 T 11-11-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00965 bdd461884437a25d45319c2e007b8adb 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 19.553 T 11-11-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SMART SM00052 580 826 3.7E-108 T 11-11-2016 IPR001633 EAL domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Pfam PF13426 PAS domain 295 397 1.8E-11 T 11-11-2016 IPR000014 PAS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SUPERFAMILY SSF54631 136 257 8.09E-17 T 11-11-2016 S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SUPERFAMILY SSF141868 587 832 3.4E-86 T 11-11-2016 IPR001633 EAL domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Pfam PF00990 Diguanylate cyclase, GGDEF domain 409 565 2.7E-49 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 404 2.4E-18 T 11-11-2016 IPR000014 PAS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 569 2.2E-42 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Pfam PF00571 CBS domain 74 126 8.5E-6 T 11-11-2016 IPR000644 CBS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Pfam PF00571 CBS domain 10 62 8.8E-7 T 11-11-2016 IPR000644 CBS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SUPERFAMILY SSF54631 8 126 5.94E-25 T 11-11-2016 S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Pfam PF00563 EAL domain 586 821 1.7E-78 T 11-11-2016 IPR001633 EAL domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SUPERFAMILY SSF55073 414 571 6.04E-50 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SMART SM00116 145 194 1.4 T 11-11-2016 IPR000644 CBS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SMART SM00116 17 64 0.058 T 11-11-2016 IPR000644 CBS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SMART SM00116 81 129 0.0092 T 11-11-2016 IPR000644 CBS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SMART SM00116 209 258 0.62 T 11-11-2016 IPR000644 CBS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Gene3D G3DSA:3.30.70.270 410 577 1.9E-56 T 11-11-2016 S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SMART SM00267 398 570 1.9E-63 T 11-11-2016 IPR000160 GGDEF domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Gene3D G3DSA:3.10.580.10 9 127 5.1E-24 T 11-11-2016 S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Gene3D G3DSA:3.10.580.10 139 257 3.6E-17 T 11-11-2016 S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Gene3D G3DSA:3.30.450.20 273 380 2.6E-20 T 11-11-2016 S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 SUPERFAMILY SSF55785 295 406 1.27E-20 T 11-11-2016 IPR000014 PAS domain S40542_RS18060 4a98077838ce47cedb6710c884f62640 838 Gene3D G3DSA:3.20.20.450 584 833 4.5E-94 T 11-11-2016 IPR001633 EAL domain S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 Gene3D G3DSA:1.10.8.60 301 372 1.2E-20 T 11-11-2016 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 Pfam PF06490 Flagellar regulatory protein FleQ 2 107 3.5E-19 T 11-11-2016 IPR010518 Flagellar regulatory FleQ S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 Gene3D G3DSA:1.10.10.60 426 476 3.2E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 Gene3D G3DSA:3.40.50.300 124 299 1.4E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 SUPERFAMILY SSF46689 423 476 1.84E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 SUPERFAMILY SSF46689 340 383 1.84E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 Pfam PF02954 Bacterial regulatory protein, Fis family 433 473 4.4E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 152 165 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 SMART SM00382 148 292 5.5E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 Pfam PF00158 Sigma-54 interaction domain 128 295 4.4E-73 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 SUPERFAMILY SSF52540 128 369 1.36E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 340 349 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 476 3.9E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS06345 a73d4de77fc2f7eb7d31421f947ec8d4 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 456 3.9E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 Gene3D G3DSA:1.10.10.10 11 62 1.3E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 Gene3D G3DSA:3.30.70.920 63 155 1.9E-26 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 SMART SM00344 10 119 4.7E-43 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 SUPERFAMILY SSF46785 9 69 5.17E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 Pfam PF01037 Lrp/AsnC ligand binding domain 76 148 1.5E-17 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 SUPERFAMILY SSF54909 72 155 2.68E-18 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.1E-16 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.1E-16 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.1E-16 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS17845 6f253f0f62d4a1167605a1fcf4739626 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 57 8.7E-20 T 11-11-2016 S40542_RS00135 f807916b6913a89da5d4dac5e1a2727d 153 Pfam PF01152 Bacterial-like globin 33 150 3.9E-31 T 11-11-2016 IPR001486 Truncated hemoglobin GO:0019825 S40542_RS00135 f807916b6913a89da5d4dac5e1a2727d 153 SUPERFAMILY SSF46458 31 152 1.46E-31 T 11-11-2016 IPR009050 Globin-like S40542_RS00135 f807916b6913a89da5d4dac5e1a2727d 153 Gene3D G3DSA:1.10.490.10 29 152 6.2E-36 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 S40542_RS13860 c164a4e6eb8d67c4dd4b98cdab37e818 496 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 480 8.7E-238 T 11-11-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 S40542_RS13860 c164a4e6eb8d67c4dd4b98cdab37e818 496 Gene3D G3DSA:3.40.605.10 2 260 2.6E-97 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 S40542_RS13860 c164a4e6eb8d67c4dd4b98cdab37e818 496 Gene3D G3DSA:3.40.309.10 261 441 1.7E-61 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 S40542_RS13860 c164a4e6eb8d67c4dd4b98cdab37e818 496 SUPERFAMILY SSF53720 2 481 6.15E-145 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 S40542_RS13860 c164a4e6eb8d67c4dd4b98cdab37e818 496 Pfam PF00171 Aldehyde dehydrogenase family 13 476 6.7E-140 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 S40542_RS13830 6fe3ff0d765d61ab94703fa356f87471 177 Gene3D G3DSA:1.25.40.10 40 113 4.0E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS13830 6fe3ff0d765d61ab94703fa356f87471 177 SUPERFAMILY SSF81901 36 101 1.96E-7 T 11-11-2016 S40542_RS13565 b7fae52f78e299394e41ed81ad22f7d7 162 SUPERFAMILY SSF52799 16 159 2.99E-26 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like S40542_RS13565 b7fae52f78e299394e41ed81ad22f7d7 162 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 111 121 - T 11-11-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 S40542_RS13565 b7fae52f78e299394e41ed81ad22f7d7 162 Gene3D G3DSA:3.90.190.10 15 162 1.9E-32 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like S40542_RS13565 b7fae52f78e299394e41ed81ad22f7d7 162 Pfam PF00782 Dual specificity phosphatase, catalytic domain 59 153 6.3E-10 T 11-11-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 S40542_RS05755 61bfddc292fdfd5f2e49f893b91db534 225 Pfam PF00483 Nucleotidyl transferase 2 123 8.6E-21 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 S40542_RS05755 61bfddc292fdfd5f2e49f893b91db534 225 Gene3D G3DSA:3.90.550.10 1 221 1.2E-47 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS05755 61bfddc292fdfd5f2e49f893b91db534 225 SUPERFAMILY SSF53448 1 219 1.06E-46 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS16800 f4f4cbf7642ff4aceb528d69401c64fa 114 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 110 9.3E-31 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 S40542_RS16800 f4f4cbf7642ff4aceb528d69401c64fa 114 SUPERFAMILY SSF55248 16 111 1.96E-33 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 S40542_RS16800 f4f4cbf7642ff4aceb528d69401c64fa 114 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 21.858 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 S40542_RS16800 f4f4cbf7642ff4aceb528d69401c64fa 114 Gene3D G3DSA:3.30.1360.20 12 112 4.9E-33 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 S40542_RS12280 fcef6278d6c87f6f436ba0ebd0fd70c0 391 SUPERFAMILY SSF55073 229 385 2.43E-42 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS12280 fcef6278d6c87f6f436ba0ebd0fd70c0 391 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 220 385 1.4E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS12280 fcef6278d6c87f6f436ba0ebd0fd70c0 391 Gene3D G3DSA:3.30.70.270 225 386 1.7E-48 T 11-11-2016 S40542_RS12280 fcef6278d6c87f6f436ba0ebd0fd70c0 391 SMART SM00267 213 386 1.4E-51 T 11-11-2016 IPR000160 GGDEF domain S40542_RS12280 fcef6278d6c87f6f436ba0ebd0fd70c0 391 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 382 2.7E-44 T 11-11-2016 IPR000160 GGDEF domain S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 4.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 4.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 4.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 4.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 SMART SM00387 318 429 2.2E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 426 2.4E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 Gene3D G3DSA:3.30.565.10 277 430 2.4E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 SMART SM00388 208 273 4.8E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 SUPERFAMILY SSF55874 264 427 4.06E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 SUPERFAMILY SSF47384 193 272 2.35E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS15460 dfea7af4d5d181c9fb1c5fbf84b8d8e7 437 Gene3D G3DSA:1.10.287.130 198 268 5.2E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS13570 7c2c4d52aaefc802778e451218a4e817 151 SMART SM00530 2 56 2.0E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS13570 7c2c4d52aaefc802778e451218a4e817 151 Gene3D G3DSA:1.10.260.40 3 70 1.3E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS13570 7c2c4d52aaefc802778e451218a4e817 151 SUPERFAMILY SSF47413 2 57 1.01E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS13570 7c2c4d52aaefc802778e451218a4e817 151 Pfam PF01381 Helix-turn-helix 3 56 7.8E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS04195 abbad8c6f36d7c7044923878279bece4 404 SUPERFAMILY SSF53383 5 390 7.37E-115 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS04195 abbad8c6f36d7c7044923878279bece4 404 PIRSF PIRSF005572 2 384 1.5E-135 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 S40542_RS04195 abbad8c6f36d7c7044923878279bece4 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.3E-224 T 11-11-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 S40542_RS04195 abbad8c6f36d7c7044923878279bece4 404 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-94 T 11-11-2016 IPR000192 Aminotransferase class V domain S40542_RS04195 abbad8c6f36d7c7044923878279bece4 404 Gene3D G3DSA:3.90.1150.10 254 374 6.0E-50 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS04195 abbad8c6f36d7c7044923878279bece4 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site S40542_RS04195 abbad8c6f36d7c7044923878279bece4 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 52.956 T 11-11-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 S40542_RS04195 abbad8c6f36d7c7044923878279bece4 404 Gene3D G3DSA:3.40.640.10 17 253 8.4E-98 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 3.0E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 3.0E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 3.0E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 3.0E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 3.0E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 3.0E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 Pfam PF00813 FliP family 47 239 2.2E-76 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 7.0E-82 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 1.8E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 1.8E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 1.8E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 1.8E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 1.8E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 1.8E-19 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 S40542_RS06420 4ff3f357e1db464af871c274b6ed4a65 247 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 S40542_RS18770 e4b93371591cbe0f1365ccbe6cfa322a 604 SUPERFAMILY SSF56601 259 590 1.52E-85 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS18770 e4b93371591cbe0f1365ccbe6cfa322a 604 Gene3D G3DSA:3.90.1310.10 165 264 8.8E-30 T 11-11-2016 S40542_RS18770 e4b93371591cbe0f1365ccbe6cfa322a 604 SUPERFAMILY SSF56519 55 257 8.37E-42 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 S40542_RS18770 e4b93371591cbe0f1365ccbe6cfa322a 604 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 578 1.3E-67 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 S40542_RS18770 e4b93371591cbe0f1365ccbe6cfa322a 604 Gene3D G3DSA:3.40.710.10 265 587 1.1E-82 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS18770 e4b93371591cbe0f1365ccbe6cfa322a 604 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 244 9.1E-22 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 Gene3D G3DSA:3.30.70.250 126 197 5.4E-32 T 11-11-2016 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 Gene3D G3DSA:3.40.366.10 198 301 3.3E-69 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 Gene3D G3DSA:3.40.366.10 3 123 3.3E-69 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 PIRSF PIRSF000446 1 308 3.1E-124 T 11-11-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 SUPERFAMILY SSF52151 5 123 3.66E-77 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 SUPERFAMILY SSF52151 191 306 3.66E-77 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 291 1.1E-115 T 11-11-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 SUPERFAMILY SSF55048 129 198 4.97E-18 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 304 1.5E-33 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain S40542_RS14420 7c4da0194d6a13faae554afe4dcaa656 308 Pfam PF00698 Acyl transferase domain 8 271 7.0E-39 T 11-11-2016 IPR014043 Acyl transferase S40542_RS02265 5200d3fbdcc011a11bb13a8a2aca2ca9 278 SUPERFAMILY SSF52821 155 276 1.06E-29 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS02265 5200d3fbdcc011a11bb13a8a2aca2ca9 278 Gene3D G3DSA:3.40.250.10 148 276 8.2E-33 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS02265 5200d3fbdcc011a11bb13a8a2aca2ca9 278 SMART SM00450 150 272 1.5E-12 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS02265 5200d3fbdcc011a11bb13a8a2aca2ca9 278 SMART SM00450 4 126 2.2E-11 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS02265 5200d3fbdcc011a11bb13a8a2aca2ca9 278 Pfam PF00581 Rhodanese-like domain 158 266 5.0E-10 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS02265 5200d3fbdcc011a11bb13a8a2aca2ca9 278 Pfam PF00581 Rhodanese-like domain 9 121 1.7E-12 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS02265 5200d3fbdcc011a11bb13a8a2aca2ca9 278 SUPERFAMILY SSF52821 5 132 2.62E-28 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS02265 5200d3fbdcc011a11bb13a8a2aca2ca9 278 Gene3D G3DSA:3.40.250.10 4 145 5.6E-31 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS13480 374da5e666611e0d40e37be0f18a0d60 447 SUPERFAMILY SSF56601 115 441 9.47E-60 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS13480 374da5e666611e0d40e37be0f18a0d60 447 Pfam PF00144 Beta-lactamase 157 414 8.2E-23 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS13480 374da5e666611e0d40e37be0f18a0d60 447 Gene3D G3DSA:3.40.710.10 155 417 1.1E-33 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS01090 ee7512f1ef564a1db7390ae4212344a6 806 Pfam PF12704 MacB-like periplasmic core domain 510 643 7.8E-10 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS01090 ee7512f1ef564a1db7390ae4212344a6 806 Pfam PF12704 MacB-like periplasmic core domain 15 237 8.6E-10 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS01090 ee7512f1ef564a1db7390ae4212344a6 806 Pfam PF02687 FtsX-like permease family 687 797 9.5E-10 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS01090 ee7512f1ef564a1db7390ae4212344a6 806 Pfam PF02687 FtsX-like permease family 286 398 1.4E-9 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 6 117 1.4E-50 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 SUPERFAMILY SSF50104 6 118 8.92E-47 T 11-11-2016 IPR008991 Translation protein SH3-like domain S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 PIRSF PIRSF002191 1 119 1.1E-50 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 Pfam PF01245 Ribosomal protein L19 7 117 1.1E-49 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 31.743 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 PRINTS PR00061 Ribosomal protein L19 signature 8 37 2.0E-40 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 PRINTS PR00061 Ribosomal protein L19 signature 38 67 2.0E-40 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 PRINTS PR00061 Ribosomal protein L19 signature 92 117 2.0E-40 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15795 4d63e0b2f96a65e937c6b54aff45c4ce 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 11-11-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 459 480 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 144 159 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 90 104 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 321 338 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 484 509 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 537 558 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 66 81 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 194 216 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01180 Arginine decarboxylase signature 170 191 5.2E-64 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PIRSF PIRSF001336 1 627 3.9E-235 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 SUPERFAMILY SSF50621 424 563 1.05E-6 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 Gene3D G3DSA:2.40.37.10 450 563 3.6E-12 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 Gene3D G3DSA:2.40.37.10 329 354 3.6E-12 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 SUPERFAMILY SSF51419 67 343 2.94E-62 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 346 557 1.1E-22 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 275 288 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 331 350 2.3E-16 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 2.3E-16 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 237 250 2.3E-16 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 537 550 2.3E-16 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 121 133 2.3E-16 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 83 342 3.5E-51 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 625 4.4E-241 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 S40542_RS00805 60278e9ca632fdfefc5624216535d3ea 627 Gene3D G3DSA:3.20.20.10 68 328 9.3E-58 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS19265 7df336601dfe8b3bc1d22ddbe1f0bf6f 224 Pfam PF04002 RadC-like JAB domain 104 222 1.2E-45 T 11-11-2016 IPR025657 RadC-like JAB domain S40542_RS19265 7df336601dfe8b3bc1d22ddbe1f0bf6f 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.1E-74 T 11-11-2016 IPR001405 RadC protein S40542_RS19265 7df336601dfe8b3bc1d22ddbe1f0bf6f 224 SUPERFAMILY SSF47781 18 87 2.34E-8 T 11-11-2016 IPR010994 RuvA domain 2-like S40542_RS19265 7df336601dfe8b3bc1d22ddbe1f0bf6f 224 Gene3D G3DSA:3.40.140.10 102 224 4.7E-50 T 11-11-2016 S40542_RS19265 7df336601dfe8b3bc1d22ddbe1f0bf6f 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-11-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site S40542_RS13790 ac138315e03b563884e4520e34101a93 512 Gene3D G3DSA:3.40.50.980 200 349 9.0E-6 T 11-11-2016 S40542_RS13790 ac138315e03b563884e4520e34101a93 512 Gene3D G3DSA:1.10.1200.10 19 78 2.0E-4 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13790 ac138315e03b563884e4520e34101a93 512 Pfam PF00501 AMP-binding enzyme 193 352 1.6E-6 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS13790 ac138315e03b563884e4520e34101a93 512 Gene3D G3DSA:3.30.300.30 411 508 1.6E-5 T 11-11-2016 S40542_RS13790 ac138315e03b563884e4520e34101a93 512 SUPERFAMILY SSF56801 91 505 1.96E-30 T 11-11-2016 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 SUPERFAMILY SSF54570 3 84 6.8E-36 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 PIRSF PIRSF002144 1 92 5.0E-32 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-11-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.5E-46 T 11-11-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.3E-25 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.3E-25 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.3E-25 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 Gene3D G3DSA:3.30.860.10 1 91 1.9E-41 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.811 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01195 f1c855d5a1948cf5261521a41004dff0 92 Pfam PF00203 Ribosomal protein S19 3 83 1.8E-37 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS04840 1d14b51bb27b75fdc8583a5028209da1 334 Pfam PF13343 Bacterial extracellular solute-binding protein 71 298 8.6E-18 T 11-11-2016 S40542_RS04840 1d14b51bb27b75fdc8583a5028209da1 334 Gene3D G3DSA:3.40.190.10 1 117 2.1E-27 T 11-11-2016 S40542_RS04840 1d14b51bb27b75fdc8583a5028209da1 334 Gene3D G3DSA:3.40.190.10 265 304 2.1E-27 T 11-11-2016 S40542_RS04840 1d14b51bb27b75fdc8583a5028209da1 334 Gene3D G3DSA:3.40.190.10 124 264 3.6E-49 T 11-11-2016 S40542_RS04840 1d14b51bb27b75fdc8583a5028209da1 334 PIRSF PIRSF002825 4 334 5.1E-85 T 11-11-2016 IPR026045 Ferric binding protein S40542_RS04840 1d14b51bb27b75fdc8583a5028209da1 334 SUPERFAMILY SSF53850 22 329 4.12E-75 T 11-11-2016 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 56.491 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 11-11-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 Gene3D G3DSA:3.40.1500.10 6 302 1.1E-136 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 SUPERFAMILY SSF102886 6 302 1.7E-139 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 PIRSF PIRSF000166 2 303 2.8E-130 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 PRINTS PR00073 Coprogen oxidase signature 48 69 1.1E-84 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 PRINTS PR00073 Coprogen oxidase signature 90 114 1.1E-84 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 PRINTS PR00073 Coprogen oxidase signature 31 47 1.1E-84 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 PRINTS PR00073 Coprogen oxidase signature 162 191 1.1E-84 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 PRINTS PR00073 Coprogen oxidase signature 125 147 1.1E-84 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 PRINTS PR00073 Coprogen oxidase signature 262 288 1.1E-84 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 PRINTS PR00073 Coprogen oxidase signature 234 261 1.1E-84 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS00125 6a7562905033dac5d3a0099d37204d4b 308 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 9.8E-134 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 S40542_RS08395 586f83bc00d9bf750de13935c7afade5 305 Pfam PF03747 ADP-ribosylglycohydrolase 9 272 1.5E-42 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 S40542_RS08395 586f83bc00d9bf750de13935c7afade5 305 SUPERFAMILY SSF101478 4 287 4.97E-47 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 S40542_RS04335 2c408d9c47eab96fcb67852e77e8d0ed 125 Gene3D G3DSA:3.40.50.300 8 78 5.5E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04335 2c408d9c47eab96fcb67852e77e8d0ed 125 SUPERFAMILY SSF52540 9 117 6.6E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 33.896 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 11-11-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 449 4.4E-49 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 Gene3D G3DSA:3.20.20.70 1 259 1.2E-100 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 252 5.0E-92 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 SUPERFAMILY SSF51366 257 452 8.48E-56 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 454 31.403 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 SUPERFAMILY SSF51366 12 254 3.88E-81 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 S40542_RS14205 4319198e58900c2315faf976b663ce2c 454 Gene3D G3DSA:3.20.20.70 260 453 1.1E-61 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS20590 fef6ccc1a1da33749cba6594b5f665e2 1048 Pfam PF14028 Lantibiotic biosynthesis dehydratase C-term 767 1041 4.6E-56 T 11-11-2016 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain S40542_RS20590 fef6ccc1a1da33749cba6594b5f665e2 1048 Pfam PF04738 Lantibiotic dehydratase, C terminus 44 693 6.0E-142 T 11-11-2016 IPR006827 Lantibiotic dehydratase, C-terminal S40542_RS20590 fef6ccc1a1da33749cba6594b5f665e2 1048 TIGRFAM TIGR03891 thiopep_ocin: thiopeptide-type bacteriocin biosynthesis domain 767 1039 3.7E-62 T 11-11-2016 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain S40542_RS04565 96d280e3e83d75e4cbd5824cd7aa7133 298 SUPERFAMILY SSF53850 103 277 6.65E-5 T 11-11-2016 S40542_RS17060 760b841b921de9d33210ec3029d0870c 266 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.811 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17060 760b841b921de9d33210ec3029d0870c 266 PIRSF PIRSF001430 1 254 7.5E-79 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17060 760b841b921de9d33210ec3029d0870c 266 Pfam PF01416 tRNA pseudouridine synthase 8 103 1.5E-9 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17060 760b841b921de9d33210ec3029d0870c 266 Pfam PF01416 tRNA pseudouridine synthase 142 244 8.9E-31 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17060 760b841b921de9d33210ec3029d0870c 266 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.5E-72 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17060 760b841b921de9d33210ec3029d0870c 266 Gene3D G3DSA:3.30.70.660 106 241 3.4E-46 T 11-11-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17060 760b841b921de9d33210ec3029d0870c 266 Gene3D G3DSA:3.30.70.580 2 104 7.8E-38 T 11-11-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17060 760b841b921de9d33210ec3029d0870c 266 SUPERFAMILY SSF55120 1 256 1.01E-90 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS07100 d7f18e9b0a52616078dfceff7d712990 214 Pfam PF11205 Protein of unknown function (DUF2987) 19 166 2.0E-40 T 11-11-2016 IPR021370 Protein of unknown function DUF2987 S40542_RS03125 c83b118de9e9f107ad9afd173d59fcb0 118 Gene3D G3DSA:3.30.1330.40 11 114 1.1E-28 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS03125 c83b118de9e9f107ad9afd173d59fcb0 118 Pfam PF01042 Endoribonuclease L-PSP 10 114 1.7E-25 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family S40542_RS03125 c83b118de9e9f107ad9afd173d59fcb0 118 SUPERFAMILY SSF55298 11 116 7.54E-34 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 Pfam PF01266 FAD dependent oxidoreductase 5 36 3.7E-7 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 384 9.4E-102 T 11-11-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.9E-22 T 11-11-2016 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.9E-22 T 11-11-2016 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.9E-22 T 11-11-2016 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 3.9E-22 T 11-11-2016 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 Gene3D G3DSA:3.50.50.60 266 346 2.9E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 Gene3D G3DSA:3.50.50.60 4 181 2.9E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 Pfam PF01494 FAD binding domain 151 333 1.5E-25 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 SUPERFAMILY SSF51905 4 176 2.43E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17775 ab1f87cc5fdb9ceaf29ccf6bcff2e624 387 SUPERFAMILY SSF51905 265 377 2.43E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS19910 c82c951c93941a28e033d459cf2df61d 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 7.9E-28 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 S40542_RS19910 c82c951c93941a28e033d459cf2df61d 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 78 7.9E-28 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 S40542_RS19910 c82c951c93941a28e033d459cf2df61d 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 8 28 7.9E-28 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 S40542_RS19910 c82c951c93941a28e033d459cf2df61d 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 7.9E-28 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 S40542_RS19910 c82c951c93941a28e033d459cf2df61d 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 96 125 7.9E-28 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 S40542_RS19910 c82c951c93941a28e033d459cf2df61d 377 Pfam PF00487 Fatty acid desaturase 38 261 1.6E-22 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 Pfam PF14684 Tricorn protease C1 domain 128 189 1.2E-7 T 11-11-2016 IPR028204 Tricorn protease C1 domain S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 SMART SM00245 225 447 3.3E-7 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 Gene3D G3DSA:3.40.710.10 482 779 9.9E-24 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 Pfam PF03572 Peptidase family S41 286 445 4.1E-24 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 SUPERFAMILY SSF52096 127 199 2.82E-41 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 SUPERFAMILY SSF52096 241 449 2.82E-41 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 Pfam PF00144 Beta-lactamase 482 706 7.4E-15 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 Gene3D G3DSA:3.90.226.10 263 455 1.3E-29 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 Gene3D G3DSA:3.30.750.44 128 189 1.9E-9 T 11-11-2016 S40542_RS00830 8d8cb32b62c4a889e2ac3d8c10ed9d66 791 SUPERFAMILY SSF56601 480 779 5.42E-24 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS20410 2b72d3ba529706b199931043be84b438 176 Pfam PF08534 Redoxin 44 154 7.0E-15 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 S40542_RS20410 2b72d3ba529706b199931043be84b438 176 Gene3D G3DSA:3.40.30.10 46 168 7.2E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS20410 2b72d3ba529706b199931043be84b438 176 SUPERFAMILY SSF52833 45 167 3.22E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS20410 2b72d3ba529706b199931043be84b438 176 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 110 124 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 518 530 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 67 80 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 480 496 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 563 579 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 32 47 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 415 429 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 498 515 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR00418 DNA topoisomerase II family signature 267 280 2.4E-58 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 1.6E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 559 621 1.7E-24 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 SMART SM00387 28 174 1.4E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 Gene3D G3DSA:3.30.230.10 217 391 3.0E-49 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 Gene3D G3DSA:3.40.50.670 399 612 6.4E-77 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.169 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 SUPERFAMILY SSF56719 389 623 1.12E-77 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 SUPERFAMILY SSF54211 219 383 2.09E-47 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 Pfam PF00204 DNA gyrase B 219 385 3.2E-41 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 SMART SM00433 35 625 4.0E-213 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 626 0.0 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 Pfam PF01751 Toprim domain 414 523 3.1E-12 T 11-11-2016 IPR006171 Toprim domain S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 Gene3D G3DSA:3.30.565.10 16 216 7.0E-76 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 SUPERFAMILY SSF55874 5 216 2.15E-66 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04640 1d14c5f56aa3ae48725bec86b37a154c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 6.2E-122 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Pfam PF01979 Amidohydrolase family 990 1058 2.9E-13 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Gene3D G3DSA:2.120.10.30 376 622 1.0E-37 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Gene3D G3DSA:2.120.10.30 44 330 1.1E-57 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 SUPERFAMILY SSF82171 44 157 7.46E-21 T 11-11-2016 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 SUPERFAMILY SSF51556 728 1023 1.0E-39 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 SUPERFAMILY SSF51338 1022 1059 3.6E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 SUPERFAMILY SSF51338 669 729 3.6E-18 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Gene3D G3DSA:3.20.20.140 731 1007 8.2E-55 T 11-11-2016 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 SUPERFAMILY SSF82171 142 341 6.87E-47 T 11-11-2016 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 SUPERFAMILY SSF82171 377 571 6.87E-47 T 11-11-2016 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Gene3D G3DSA:2.30.40.10 1035 1064 2.4E-27 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Gene3D G3DSA:2.30.40.10 668 730 2.4E-27 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Gene3D G3DSA:2.30.40.10 1008 1034 1.3E-8 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Pfam PF07676 WD40-like Beta Propeller Repeat 455 476 0.0014 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Pfam PF07676 WD40-like Beta Propeller Repeat 252 273 0.026 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Pfam PF07676 WD40-like Beta Propeller Repeat 90 123 1.5E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Pfam PF07676 WD40-like Beta Propeller Repeat 142 155 0.012 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS00575 bd2bb6f82a7cfe9b82f833a2ae59472b 1106 Pfam PF07676 WD40-like Beta Propeller Repeat 194 215 0.014 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 Pfam PF11741 AMIN domain 33 133 4.7E-17 T 11-11-2016 IPR021731 AMIN domain S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 159 378 9.2E-48 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 SMART SM00257 401 444 1.8E-13 T 11-11-2016 IPR018392 LysM domain S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 Gene3D G3DSA:3.10.350.10 401 445 3.9E-16 T 11-11-2016 IPR018392 LysM domain S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 SMART SM00646 219 378 5.8E-59 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 Pfam PF01476 LysM domain 402 444 1.9E-11 T 11-11-2016 IPR018392 LysM domain S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 SUPERFAMILY SSF53187 305 382 1.51E-52 T 11-11-2016 S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 SUPERFAMILY SSF53187 157 253 1.51E-52 T 11-11-2016 S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 SUPERFAMILY SSF54106 401 444 1.1E-10 T 11-11-2016 IPR018392 LysM domain S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 Gene3D G3DSA:3.40.630.40 157 266 7.8E-57 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 S40542_RS04080 87a50a1c36746a150a95769c4539cccf 446 Gene3D G3DSA:3.40.630.40 306 382 7.8E-57 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 158 2.5E-24 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 841 858 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 Gene3D G3DSA:2.40.170.20 362 858 3.4E-85 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 Gene3D G3DSA:2.40.170.20 266 322 3.4E-85 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 Gene3D G3DSA:2.40.170.20 162 220 3.4E-85 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 Gene3D G3DSA:2.170.130.10 44 161 1.8E-36 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 SUPERFAMILY SSF56935 684 858 3.43E-98 T 11-11-2016 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 SUPERFAMILY SSF56935 24 218 3.43E-98 T 11-11-2016 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 SUPERFAMILY SSF56935 285 648 3.43E-98 T 11-11-2016 S40542_RS08045 d40851713545fdaa124159727fc9ca46 858 Pfam PF00593 TonB dependent receptor 547 856 2.3E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-11-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.314 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 7.0E-124 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 9.0E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 9.0E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 9.0E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 9.0E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 9.0E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 9.0E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 Gene3D G3DSA:3.30.420.40 2 159 3.4E-46 T 11-11-2016 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 SUPERFAMILY SSF53067 3 123 1.47E-29 T 11-11-2016 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 9.1E-135 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 SUPERFAMILY SSF53067 102 309 2.04E-44 T 11-11-2016 S40542_RS04805 93071743bb548d8eab90eb396e5337e0 338 Pfam PF00814 Glycoprotease family 24 307 2.7E-101 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 Pfam PF00723 Glycosyl hydrolases family 15 35 465 2.8E-61 T 11-11-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 PRINTS PR00736 Glycosyl hydrolase family 15 signature 118 135 2.6E-40 T 11-11-2016 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 PRINTS PR00736 Glycosyl hydrolase family 15 signature 136 155 2.6E-40 T 11-11-2016 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 PRINTS PR00736 Glycosyl hydrolase family 15 signature 425 446 2.6E-40 T 11-11-2016 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 PRINTS PR00736 Glycosyl hydrolase family 15 signature 47 64 2.6E-40 T 11-11-2016 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 PRINTS PR00736 Glycosyl hydrolase family 15 signature 458 473 2.6E-40 T 11-11-2016 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 PRINTS PR00736 Glycosyl hydrolase family 15 signature 191 209 2.6E-40 T 11-11-2016 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 PRINTS PR00736 Glycosyl hydrolase family 15 signature 323 342 2.6E-40 T 11-11-2016 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 Gene3D G3DSA:1.50.10.10 19 475 1.3E-118 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 S40542_RS14055 6a8a94cdb261e7b04f9557ff67420cf4 478 SUPERFAMILY SSF48208 20 475 2.15E-94 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 S40542_RS04965 3dcf12b943299f7284d6cb7beaf6b599 384 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 382 47.298 T 11-11-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS04965 3dcf12b943299f7284d6cb7beaf6b599 384 Pfam PF05175 Methyltransferase small domain 206 378 2.0E-54 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 S40542_RS04965 3dcf12b943299f7284d6cb7beaf6b599 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 311 317 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS04965 3dcf12b943299f7284d6cb7beaf6b599 384 SUPERFAMILY SSF53335 206 369 3.73E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS04965 3dcf12b943299f7284d6cb7beaf6b599 384 Gene3D G3DSA:3.40.50.150 206 381 3.1E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS04965 3dcf12b943299f7284d6cb7beaf6b599 384 PIRSF PIRSF037565 1 383 2.3E-153 T 11-11-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS07035 eb8257cc9a9b7cb41f74d5685cbe3479 326 SUPERFAMILY SSF55681 91 326 1.28E-82 T 11-11-2016 S40542_RS07035 eb8257cc9a9b7cb41f74d5685cbe3479 326 SUPERFAMILY SSF46589 12 98 1.52E-23 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 S40542_RS07035 eb8257cc9a9b7cb41f74d5685cbe3479 326 Gene3D G3DSA:3.30.930.10 8 326 1.4E-135 T 11-11-2016 S40542_RS07035 eb8257cc9a9b7cb41f74d5685cbe3479 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 86 1.9E-26 T 11-11-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 S40542_RS07035 eb8257cc9a9b7cb41f74d5685cbe3479 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 4.3E-107 T 11-11-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 S40542_RS07035 eb8257cc9a9b7cb41f74d5685cbe3479 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 325 1.6E-116 T 11-11-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 S40542_RS07035 eb8257cc9a9b7cb41f74d5685cbe3479 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 49.629 T 11-11-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 PRINTS PR00095 Anthranilate synthase component I signature 396 410 1.8E-16 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 PRINTS PR00095 Anthranilate synthase component I signature 301 314 1.8E-16 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 PRINTS PR00095 Anthranilate synthase component I signature 381 395 1.8E-16 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 PRINTS PR00095 Anthranilate synthase component I signature 287 300 1.8E-16 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 SUPERFAMILY SSF56322 20 447 1.13E-139 T 11-11-2016 IPR005801 ADC synthase GO:0009058 S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 Pfam PF04715 Anthranilate synthase component I, N terminal region 15 146 1.3E-27 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 Pfam PF00425 chorismate binding enzyme 185 439 2.1E-95 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 Gene3D G3DSA:3.60.120.10 14 447 1.0E-149 T 11-11-2016 IPR005801 ADC synthase GO:0009058 S40542_RS14950 c9827b7a3d4187678752924f3c2ef5f0 448 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 99 442 5.3E-120 T 11-11-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 S40542_RS01695 835fbd2bf2897ab0cb7e3516ad402953 109 SUPERFAMILY SSF50249 9 108 2.69E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS01695 835fbd2bf2897ab0cb7e3516ad402953 109 PIRSF PIRSF003135 3 109 2.5E-38 T 11-11-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 S40542_RS01695 835fbd2bf2897ab0cb7e3516ad402953 109 Pfam PF00436 Single-strand binding protein family 11 93 2.5E-8 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 S40542_RS01695 835fbd2bf2897ab0cb7e3516ad402953 109 Hamap MF_00720 Primosomal replication protein n [priB]. 9 108 25.437 T 11-11-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 S40542_RS01695 835fbd2bf2897ab0cb7e3516ad402953 109 Gene3D G3DSA:2.40.50.140 7 108 1.0E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS01695 835fbd2bf2897ab0cb7e3516ad402953 109 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 11 108 7.9E-35 T 11-11-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 S40542_RS05435 596ff4ae661a50a9298cf49944ebe1a0 586 SUPERFAMILY SSF55874 426 575 3.8E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS05435 596ff4ae661a50a9298cf49944ebe1a0 586 SMART SM00387 466 578 5.3E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS05435 596ff4ae661a50a9298cf49944ebe1a0 586 Gene3D G3DSA:3.30.565.10 428 575 2.6E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS05435 596ff4ae661a50a9298cf49944ebe1a0 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 3.9E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS05435 596ff4ae661a50a9298cf49944ebe1a0 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 575 3.9E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS05435 596ff4ae661a50a9298cf49944ebe1a0 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 555 3.9E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS05435 596ff4ae661a50a9298cf49944ebe1a0 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 3.9E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS05435 596ff4ae661a50a9298cf49944ebe1a0 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 577 4.9E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS19785 59fd9a08c719ffe495a5a03177279d3a 510 Pfam PF03929 PepSY-associated TM region 12 354 9.3E-34 T 11-11-2016 IPR005625 PepSY-associated TM protein S40542_RS01510 5b9065c738958ebeca4cd4720f5a8395 129 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 127 7.4E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01510 5b9065c738958ebeca4cd4720f5a8395 129 Gene3D G3DSA:1.10.760.10 54 128 3.4E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01510 5b9065c738958ebeca4cd4720f5a8395 129 SUPERFAMILY SSF46626 54 128 4.52E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS01510 5b9065c738958ebeca4cd4720f5a8395 129 PRINTS PR00607 Class IE cytochrome C signature 102 114 2.3E-13 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 S40542_RS01510 5b9065c738958ebeca4cd4720f5a8395 129 PRINTS PR00607 Class IE cytochrome C signature 65 76 2.3E-13 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 S40542_RS01510 5b9065c738958ebeca4cd4720f5a8395 129 PRINTS PR00607 Class IE cytochrome C signature 76 86 2.3E-13 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 S40542_RS01510 5b9065c738958ebeca4cd4720f5a8395 129 PRINTS PR00607 Class IE cytochrome C signature 117 128 2.3E-13 T 11-11-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 S40542_RS04890 e750cda5805afb5ba0443c14450b5488 507 Gene3D G3DSA:3.40.50.1820 43 461 1.7E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS04890 e750cda5805afb5ba0443c14450b5488 507 Pfam PF00450 Serine carboxypeptidase 71 446 3.3E-14 T 11-11-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 S40542_RS04890 e750cda5805afb5ba0443c14450b5488 507 SUPERFAMILY SSF53474 36 479 1.29E-77 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS04620 eb453797a8ee5e4bc49ef9eaa667fc00 206 SUPERFAMILY SSF55811 19 199 3.54E-40 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS04620 eb453797a8ee5e4bc49ef9eaa667fc00 206 Gene3D G3DSA:3.90.79.10 19 201 1.0E-47 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS04620 eb453797a8ee5e4bc49ef9eaa667fc00 206 Pfam PF00293 NUDIX domain 55 178 6.0E-11 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS04620 eb453797a8ee5e4bc49ef9eaa667fc00 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 20 198 2.8E-47 T 11-11-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 475 7.6E-30 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 PRINTS PR01050 Pyruvate kinase family signature 316 332 7.0E-53 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 PRINTS PR01050 Pyruvate kinase family signature 187 201 7.0E-53 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 PRINTS PR01050 Pyruvate kinase family signature 60 76 7.0E-53 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 PRINTS PR01050 Pyruvate kinase family signature 247 271 7.0E-53 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 PRINTS PR01050 Pyruvate kinase family signature 220 246 7.0E-53 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 PRINTS PR01050 Pyruvate kinase family signature 272 296 7.0E-53 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 PRINTS PR01050 Pyruvate kinase family signature 297 315 7.0E-53 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 Gene3D G3DSA:2.40.33.10 74 167 2.9E-27 T 11-11-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 Gene3D G3DSA:3.20.20.60 169 328 1.5E-94 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 Gene3D G3DSA:3.20.20.60 3 73 1.5E-94 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 Gene3D G3DSA:3.40.1380.20 329 474 5.8E-40 T 11-11-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-11-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 1.4E-125 T 11-11-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 SUPERFAMILY SSF51621 168 341 3.0E-88 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 SUPERFAMILY SSF51621 2 76 3.0E-88 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 SUPERFAMILY SSF50800 71 164 3.66E-24 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 SUPERFAMILY SSF52935 326 477 1.15E-37 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS10900 a4d2d1fbae1220add5734d8233603d6d 477 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 477 6.0E-162 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 S40542_RS12210 c4a1afd377eacfcdb908b6248207bce7 262 Pfam PF01026 TatD related DNase 3 254 8.3E-78 T 11-11-2016 IPR001130 TatD family GO:0016788 S40542_RS12210 c4a1afd377eacfcdb908b6248207bce7 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 1.2E-91 T 11-11-2016 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 S40542_RS12210 c4a1afd377eacfcdb908b6248207bce7 262 PIRSF PIRSF005902 1 258 6.3E-82 T 11-11-2016 IPR001130 TatD family GO:0016788 S40542_RS12210 c4a1afd377eacfcdb908b6248207bce7 262 SUPERFAMILY SSF51556 1 256 1.01E-87 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS12210 c4a1afd377eacfcdb908b6248207bce7 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 S40542_RS12210 c4a1afd377eacfcdb908b6248207bce7 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 S40542_RS12210 c4a1afd377eacfcdb908b6248207bce7 262 Gene3D G3DSA:3.20.20.140 1 255 4.2E-88 T 11-11-2016 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 Gene3D G3DSA:3.50.50.60 2 61 2.9E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 Gene3D G3DSA:3.50.50.60 354 411 2.9E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 Gene3D G3DSA:3.50.50.60 111 133 2.9E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 Gene3D G3DSA:3.50.50.60 186 267 2.9E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 SUPERFAMILY SSF51905 5 123 4.14E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 SUPERFAMILY SSF51905 354 411 4.14E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 SUPERFAMILY SSF51905 153 268 4.14E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 SUPERFAMILY SSF54373 270 354 5.49E-9 T 11-11-2016 S40542_RS08015 58bca64b4d4d414cbf8722dc111816c2 412 Pfam PF01266 FAD dependent oxidoreductase 6 393 2.1E-50 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 S40542_RS01920 e3ca70109856b67cc4154bf434d4eff3 291 Pfam PF00510 Cytochrome c oxidase subunit III 8 290 1.0E-51 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01920 e3ca70109856b67cc4154bf434d4eff3 291 Gene3D G3DSA:1.20.120.80 78 290 3.5E-63 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01920 e3ca70109856b67cc4154bf434d4eff3 291 Gene3D G3DSA:1.10.287.70 2 74 1.8E-18 T 11-11-2016 S40542_RS01920 e3ca70109856b67cc4154bf434d4eff3 291 SUPERFAMILY SSF81452 3 291 1.05E-79 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS10165 8473ba9978ca47ed6965a819f6e4141e 270 Pfam PF01925 Sulfite exporter TauE/SafE 12 267 1.1E-49 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 S40542_RS18670 83f1c3a110e61fa66f0d36b1cb1cafee 273 Pfam PF05552 Conserved TM helix 7 54 2.0E-7 T 11-11-2016 IPR008910 Conserved TM helix S40542_RS18670 83f1c3a110e61fa66f0d36b1cb1cafee 273 SUPERFAMILY SSF82689 172 269 3.01E-33 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 S40542_RS18670 83f1c3a110e61fa66f0d36b1cb1cafee 273 Gene3D G3DSA:3.30.70.100 173 257 2.7E-29 T 11-11-2016 S40542_RS18670 83f1c3a110e61fa66f0d36b1cb1cafee 273 Gene3D G3DSA:2.30.30.60 120 169 8.4E-20 T 11-11-2016 S40542_RS18670 83f1c3a110e61fa66f0d36b1cb1cafee 273 Pfam PF00924 Mechanosensitive ion channel 62 259 3.2E-57 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 S40542_RS18670 83f1c3a110e61fa66f0d36b1cb1cafee 273 SUPERFAMILY SSF50182 105 170 1.73E-17 T 11-11-2016 IPR010920 LSM domain S40542_RS18670 83f1c3a110e61fa66f0d36b1cb1cafee 273 SUPERFAMILY SSF82861 19 103 1.57E-17 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 S40542_RS03405 9be3dad4cce29299d37b103e1959f7a3 88 Gene3D G3DSA:1.10.10.60 14 83 4.3E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS03405 9be3dad4cce29299d37b103e1959f7a3 88 Pfam PF01527 Transposase 2 70 2.2E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 S40542_RS03405 9be3dad4cce29299d37b103e1959f7a3 88 SUPERFAMILY SSF46689 1 73 9.68E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS20670 53645b4c893eb5a065d30383aa2e6d9c 227 SMART SM00421 164 221 3.2E-17 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS20670 53645b4c893eb5a065d30383aa2e6d9c 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 166 219 1.2E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS20670 53645b4c893eb5a065d30383aa2e6d9c 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 181 3.2E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS20670 53645b4c893eb5a065d30383aa2e6d9c 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 197 3.2E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS20670 53645b4c893eb5a065d30383aa2e6d9c 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 209 3.2E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS20670 53645b4c893eb5a065d30383aa2e6d9c 227 SUPERFAMILY SSF46894 159 227 1.56E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS20670 53645b4c893eb5a065d30383aa2e6d9c 227 Gene3D G3DSA:1.10.10.10 167 227 1.4E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09025 4bcbe5b8f30ab09601e0dfe942bcf9dc 264 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 41.889 T 11-11-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 S40542_RS09025 4bcbe5b8f30ab09601e0dfe942bcf9dc 264 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 250 1.6E-94 T 11-11-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 S40542_RS09025 4bcbe5b8f30ab09601e0dfe942bcf9dc 264 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 11-11-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 S40542_RS09025 4bcbe5b8f30ab09601e0dfe942bcf9dc 264 SUPERFAMILY SSF100950 1 256 1.4E-96 T 11-11-2016 S40542_RS09025 4bcbe5b8f30ab09601e0dfe942bcf9dc 264 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 228 6.4E-23 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 S40542_RS09025 4bcbe5b8f30ab09601e0dfe942bcf9dc 264 Gene3D G3DSA:3.40.50.1360 1 257 2.1E-99 T 11-11-2016 S40542_RS07600 714e99d241974f7214789eadda45f342 132 Gene3D G3DSA:1.25.40.10 41 79 7.8E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07600 714e99d241974f7214789eadda45f342 132 SUPERFAMILY SSF48452 41 79 3.41E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14005 4af59c383840bb93b291e42b9c27d4bd 202 Pfam PF00578 AhpC/TSA family 27 151 3.2E-16 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS14005 4af59c383840bb93b291e42b9c27d4bd 202 SUPERFAMILY SSF52833 22 201 8.28E-34 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS14005 4af59c383840bb93b291e42b9c27d4bd 202 Gene3D G3DSA:3.40.30.10 25 156 2.0E-26 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS11625 13772d7c0847a871c047e1d1639d0ecb 216 SMART SM00945 5 119 1.5E-53 T 11-11-2016 IPR016103 ProQ/FinO domain S40542_RS11625 13772d7c0847a871c047e1d1639d0ecb 216 Gene3D G3DSA:1.10.1710.10 3 117 9.6E-34 T 11-11-2016 IPR016103 ProQ/FinO domain S40542_RS11625 13772d7c0847a871c047e1d1639d0ecb 216 Pfam PF04352 ProQ/FINO family 8 115 1.4E-38 T 11-11-2016 IPR016103 ProQ/FinO domain S40542_RS11625 13772d7c0847a871c047e1d1639d0ecb 216 SUPERFAMILY SSF48657 5 118 5.36E-33 T 11-11-2016 IPR016103 ProQ/FinO domain S40542_RS11625 13772d7c0847a871c047e1d1639d0ecb 216 Hamap MF_00749 RNA chaperone ProQ [proQ]. 2 216 27.424 T 11-11-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 2 427 33.179 T 11-11-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 Gene3D G3DSA:1.10.3410.10 243 345 5.5E-22 T 11-11-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 22 428 2.1E-117 T 11-11-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 Pfam PF13286 Phosphohydrolase-associated domain 334 425 6.5E-23 T 11-11-2016 IPR026875 Phosphohydrolase-associated domain S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 Gene3D G3DSA:1.10.3210.10 12 242 1.4E-65 T 11-11-2016 IPR006674 HD domain S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 Pfam PF01966 HD domain 59 145 5.6E-11 T 11-11-2016 IPR006674 HD domain S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 SUPERFAMILY SSF109604 224 429 2.15E-74 T 11-11-2016 S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 SUPERFAMILY SSF109604 18 163 2.15E-74 T 11-11-2016 S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 Gene3D G3DSA:1.10.3550.10 346 423 6.0E-7 T 11-11-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain S40542_RS07090 debf9fa894a4e57dffea75060d63ba24 434 SMART SM00471 55 256 1.1E-10 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 619 652 - T 11-11-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 Pfam PF03958 Bacterial type II/III secretion system short domain 364 428 1.9E-12 T 11-11-2016 IPR005644 NolW-like S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 Pfam PF00263 Bacterial type II and III secretion system protein 515 673 9.2E-48 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 638 656 2.6E-20 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 546 556 2.6E-20 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 535 2.6E-20 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 661 675 2.6E-20 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 PRINTS PR00811 Bacterial general secretion pathway protein D signature 428 438 2.6E-20 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 SMART SM00965 290 338 7.1E-8 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 265 674 1.8E-158 T 11-11-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 S40542_RS01370 48b40515fdcc3a9c29fdca3f1a6a0832 677 Pfam PF11741 AMIN domain 43 116 8.7E-6 T 11-11-2016 IPR021731 AMIN domain S40542_RS05060 3d846afbfaca909e30442dfdd77efcb3 199 Gene3D G3DSA:3.40.50.300 5 199 3.6E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05060 3d846afbfaca909e30442dfdd77efcb3 199 PIRSF PIRSF015617 4 199 7.4E-64 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 S40542_RS05060 3d846afbfaca909e30442dfdd77efcb3 199 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 31 199 5.2E-58 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 S40542_RS05060 3d846afbfaca909e30442dfdd77efcb3 199 SUPERFAMILY SSF52540 10 199 3.84E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05060 3d846afbfaca909e30442dfdd77efcb3 199 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 30 199 1.3E-68 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 S40542_RS07795 acb08992f213725ac185cf8b79249575 111 Gene3D G3DSA:2.20.25.10 1 39 1.4E-18 T 11-11-2016 S40542_RS07795 acb08992f213725ac185cf8b79249575 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 111 6.7E-42 T 11-11-2016 IPR004624 PhnA protein S40542_RS07795 acb08992f213725ac185cf8b79249575 111 Pfam PF03831 PhnA domain 43 111 2.0E-26 T 11-11-2016 IPR013988 PhnA protein, C-terminal S40542_RS07795 acb08992f213725ac185cf8b79249575 111 Gene3D G3DSA:2.30.30.40 42 111 6.2E-28 T 11-11-2016 S40542_RS07795 acb08992f213725ac185cf8b79249575 111 SUPERFAMILY SSF57783 2 37 1.02E-12 T 11-11-2016 S40542_RS07795 acb08992f213725ac185cf8b79249575 111 Pfam PF08274 PhnA Zinc-Ribbon 4 31 7.2E-13 T 11-11-2016 IPR013987 PhnA protein, N-terminal S40542_RS07795 acb08992f213725ac185cf8b79249575 111 SUPERFAMILY SSF82057 38 111 5.04E-24 T 11-11-2016 S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 Gene3D G3DSA:1.20.5.710 3 49 5.4E-22 T 11-11-2016 S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 54 120 9.2E-30 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 Gene3D G3DSA:3.30.1390.10 50 120 1.4E-32 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 120 2.1E-45 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 5.8E-18 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 SUPERFAMILY SSF48300 4 56 1.29E-16 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 SUPERFAMILY SSF54736 49 120 2.96E-24 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 120 25.071 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19540 a5619f083daf3453dd8e65e1b09ec653 120 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 55 99 4.0E-13 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS18310 87387e860a388dd7d8ce582c77159ae0 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 9.0E-62 T 11-11-2016 IPR007551 Protein of unknown function DUF520 S40542_RS18310 87387e860a388dd7d8ce582c77159ae0 160 SUPERFAMILY SSF89963 2 86 2.88E-27 T 11-11-2016 IPR007551 Protein of unknown function DUF520 S40542_RS18310 87387e860a388dd7d8ce582c77159ae0 160 Gene3D G3DSA:3.30.70.860 95 160 1.7E-35 T 11-11-2016 S40542_RS18310 87387e860a388dd7d8ce582c77159ae0 160 Gene3D G3DSA:3.30.70.990 9 94 4.7E-27 T 11-11-2016 S40542_RS18310 87387e860a388dd7d8ce582c77159ae0 160 SUPERFAMILY SSF89963 89 160 1.83E-30 T 11-11-2016 IPR007551 Protein of unknown function DUF520 S40542_RS18310 87387e860a388dd7d8ce582c77159ae0 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 28.957 T 11-11-2016 IPR007551 Protein of unknown function DUF520 S40542_RS01565 1ca3b7ce10ed9a3dd9c030da60708ebc 391 Pfam PF08668 HDOD domain 137 255 2.0E-10 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS01565 1ca3b7ce10ed9a3dd9c030da60708ebc 391 Gene3D G3DSA:1.10.3150.10 140 374 5.5E-12 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS01565 1ca3b7ce10ed9a3dd9c030da60708ebc 391 SUPERFAMILY SSF109604 107 316 1.0E-14 T 11-11-2016 S40542_RS13850 f5b8be7e6053caddaf3ece2b49ea1ee0 258 Gene3D G3DSA:1.10.12.10 201 255 1.1E-20 T 11-11-2016 IPR014748 Crontonase, C-terminal S40542_RS13850 f5b8be7e6053caddaf3ece2b49ea1ee0 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 4.0E-56 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 S40542_RS13850 f5b8be7e6053caddaf3ece2b49ea1ee0 258 Gene3D G3DSA:3.90.226.10 3 197 5.8E-63 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13850 f5b8be7e6053caddaf3ece2b49ea1ee0 258 SUPERFAMILY SSF52096 5 257 3.5E-78 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13850 f5b8be7e6053caddaf3ece2b49ea1ee0 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 11-11-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 S40542_RS13950 53a2d689be50f5b8a3b442d67d5efae5 398 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 254 371 1.6E-19 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal S40542_RS13950 53a2d689be50f5b8a3b442d67d5efae5 398 SUPERFAMILY SSF52540 3 234 6.79E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS13950 53a2d689be50f5b8a3b442d67d5efae5 398 SUPERFAMILY SSF90002 253 316 2.35E-12 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal S40542_RS13950 53a2d689be50f5b8a3b442d67d5efae5 398 SUPERFAMILY SSF90002 346 372 2.35E-12 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal S40542_RS13950 53a2d689be50f5b8a3b442d67d5efae5 398 Gene3D G3DSA:3.30.1220.10 248 372 1.1E-8 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal S40542_RS13950 53a2d689be50f5b8a3b442d67d5efae5 398 SMART SM00833 252 372 1.3E-32 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal S40542_RS13950 53a2d689be50f5b8a3b442d67d5efae5 398 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 202 1.7E-27 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain S40542_RS13950 53a2d689be50f5b8a3b442d67d5efae5 398 Gene3D G3DSA:3.40.50.300 3 218 1.7E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05810 bf65addb432bf7bfac6301bf6928f144 775 SUPERFAMILY SSF56935 657 774 3.21E-97 T 11-11-2016 S40542_RS05810 bf65addb432bf7bfac6301bf6928f144 775 SUPERFAMILY SSF56935 32 622 3.21E-97 T 11-11-2016 S40542_RS05810 bf65addb432bf7bfac6301bf6928f144 775 Pfam PF00593 TonB dependent receptor 493 747 2.5E-18 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS05810 bf65addb432bf7bfac6301bf6928f144 775 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 163 4.2E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS05810 bf65addb432bf7bfac6301bf6928f144 775 Gene3D G3DSA:2.40.170.20 174 621 3.8E-76 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS05810 bf65addb432bf7bfac6301bf6928f144 775 Gene3D G3DSA:2.40.170.20 660 774 3.8E-76 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS05810 bf65addb432bf7bfac6301bf6928f144 775 Gene3D G3DSA:2.170.130.10 33 173 7.4E-23 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS11735 a0149df9471a37c40726a020808bb451 526 Gene3D G3DSA:3.30.559.10 283 523 3.3E-96 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 S40542_RS11735 a0149df9471a37c40726a020808bb451 526 Gene3D G3DSA:4.10.320.10 223 273 8.2E-19 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS11735 a0149df9471a37c40726a020808bb451 526 SUPERFAMILY SSF47005 224 265 5.1E-12 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS11735 a0149df9471a37c40726a020808bb451 526 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 295 523 3.5E-85 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS11735 a0149df9471a37c40726a020808bb451 526 SUPERFAMILY SSF51230 107 191 2.88E-23 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS11735 a0149df9471a37c40726a020808bb451 526 Gene3D G3DSA:2.40.50.100 1 96 1.5E-24 T 11-11-2016 S40542_RS11735 a0149df9471a37c40726a020808bb451 526 Pfam PF02817 e3 binding domain 227 261 3.3E-13 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 S40542_RS11735 a0149df9471a37c40726a020808bb451 526 SUPERFAMILY SSF51230 1 95 8.9E-27 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS11735 a0149df9471a37c40726a020808bb451 526 Pfam PF00364 Biotin-requiring enzyme 108 179 2.3E-18 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS11735 a0149df9471a37c40726a020808bb451 526 Pfam PF00364 Biotin-requiring enzyme 4 75 1.2E-19 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS11735 a0149df9471a37c40726a020808bb451 526 SUPERFAMILY SSF52777 288 523 2.09E-78 T 11-11-2016 S40542_RS11735 a0149df9471a37c40726a020808bb451 526 Gene3D G3DSA:2.40.50.100 108 180 6.1E-23 T 11-11-2016 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 SUPERFAMILY SSF52540 153 381 1.01E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 Gene3D G3DSA:1.10.10.60 393 442 6.9E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 Gene3D G3DSA:3.40.50.2300 3 140 1.6E-27 T 11-11-2016 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 SMART SM00382 173 316 1.9E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 Pfam PF02954 Bacterial regulatory protein, Fis family 404 439 4.8E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 SUPERFAMILY SSF52172 3 196 4.55E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 Gene3D G3DSA:1.10.8.60 326 392 2.0E-13 T 11-11-2016 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 SMART SM00448 2 118 2.0E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 Pfam PF00072 Response regulator receiver domain 4 118 8.6E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 7.9E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 7.9E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 SUPERFAMILY SSF46689 357 442 9.41E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 239 254 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 Pfam PF00158 Sigma-54 interaction domain 154 319 1.8E-64 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS08110 8ae60e9b96279ceb21aefcb7b4d5cba6 443 Gene3D G3DSA:3.40.50.300 152 325 1.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 Gene3D G3DSA:2.40.10.10 152 264 2.6E-46 T 11-11-2016 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 SUPERFAMILY SSF50156 245 354 5.72E-21 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 374 424 8.8E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 SMART SM00228 263 345 6.9E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 SMART SM00228 370 442 4.1E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 Gene3D G3DSA:2.30.42.10 265 361 1.8E-25 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 SUPERFAMILY SSF50494 2 58 7.27E-64 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 SUPERFAMILY SSF50494 86 271 7.27E-64 T 11-11-2016 IPR009003 Peptidase S1, PA clan S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 Pfam PF13365 Trypsin-like peptidase domain 89 224 6.7E-31 T 11-11-2016 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 447 9.4E-149 T 11-11-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 Gene3D G3DSA:2.40.10.10 37 151 3.4E-34 T 11-11-2016 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 Gene3D G3DSA:2.30.42.10 383 444 2.1E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 SUPERFAMILY SSF50156 382 443 2.76E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 2.3E-57 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 PRINTS PR00834 HtrA/DegQ protease family signature 120 140 2.3E-57 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 PRINTS PR00834 HtrA/DegQ protease family signature 160 184 2.3E-57 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 PRINTS PR00834 HtrA/DegQ protease family signature 303 315 2.3E-57 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 PRINTS PR00834 HtrA/DegQ protease family signature 99 111 2.3E-57 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 PRINTS PR00834 HtrA/DegQ protease family signature 195 212 2.3E-57 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 S40542_RS18955 91a52f5df9302cd6233d504102b389cd 450 Pfam PF13180 PDZ domain 274 354 1.2E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS08710 5d14a7fa4a6f8a5f4a3931ec71008a13 236 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 223 1.9E-50 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 S40542_RS08710 5d14a7fa4a6f8a5f4a3931ec71008a13 236 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 228 2.6E-51 T 11-11-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 S40542_RS08710 5d14a7fa4a6f8a5f4a3931ec71008a13 236 Gene3D G3DSA:3.40.50.1360 8 228 9.2E-49 T 11-11-2016 S40542_RS08710 5d14a7fa4a6f8a5f4a3931ec71008a13 236 SUPERFAMILY SSF100950 8 228 2.93E-49 T 11-11-2016 S40542_RS08020 49cc572851265c4ae6d3ce5939cf710f 304 SUPERFAMILY SSF51569 4 290 1.26E-85 T 11-11-2016 S40542_RS08020 49cc572851265c4ae6d3ce5939cf710f 304 PIRSF PIRSF001365 1 300 1.5E-82 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS08020 49cc572851265c4ae6d3ce5939cf710f 304 SMART SM01130 4 292 3.5E-99 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS08020 49cc572851265c4ae6d3ce5939cf710f 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 287 3.0E-63 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS08020 49cc572851265c4ae6d3ce5939cf710f 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 8.6E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS08020 49cc572851265c4ae6d3ce5939cf710f 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 8.6E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS08020 49cc572851265c4ae6d3ce5939cf710f 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 8.6E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 S40542_RS08020 49cc572851265c4ae6d3ce5939cf710f 304 Gene3D G3DSA:3.20.20.70 3 290 5.7E-93 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS18200 1e3830fc8f6cce18af9f76680346873f 744 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 462 736 1.3E-9 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS18200 1e3830fc8f6cce18af9f76680346873f 744 SUPERFAMILY SSF161098 434 539 6.54E-6 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS18200 1e3830fc8f6cce18af9f76680346873f 744 SUPERFAMILY SSF50978 88 380 2.47E-7 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 S40542_RS18200 1e3830fc8f6cce18af9f76680346873f 744 SUPERFAMILY SSF161098 552 730 2.49E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS18200 1e3830fc8f6cce18af9f76680346873f 744 Gene3D G3DSA:1.10.3720.10 580 741 2.2E-46 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS18200 1e3830fc8f6cce18af9f76680346873f 744 Gene3D G3DSA:1.10.3720.10 33 55 2.2E-46 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS18200 1e3830fc8f6cce18af9f76680346873f 744 Gene3D G3DSA:1.10.3720.10 425 507 2.2E-46 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS18200 1e3830fc8f6cce18af9f76680346873f 744 Gene3D G3DSA:2.130.10.10 91 304 4.7E-5 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS06585 4ab4a4f10a586660ca02575220eabe2b 407 SMART SM00052 3 196 0.001 T 11-11-2016 IPR001633 EAL domain S40542_RS06585 4ab4a4f10a586660ca02575220eabe2b 407 SUPERFAMILY SSF141868 3 193 1.06E-25 T 11-11-2016 IPR001633 EAL domain S40542_RS06585 4ab4a4f10a586660ca02575220eabe2b 407 Pfam PF00563 EAL domain 82 191 8.3E-13 T 11-11-2016 IPR001633 EAL domain S40542_RS06585 4ab4a4f10a586660ca02575220eabe2b 407 Pfam PF08668 HDOD domain 199 321 2.9E-18 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS06585 4ab4a4f10a586660ca02575220eabe2b 407 SUPERFAMILY SSF109604 182 400 1.22E-44 T 11-11-2016 S40542_RS06585 4ab4a4f10a586660ca02575220eabe2b 407 Gene3D G3DSA:1.10.3150.10 183 400 1.2E-37 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS06585 4ab4a4f10a586660ca02575220eabe2b 407 PIRSF PIRSF003180 1 405 2.2E-134 T 11-11-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing S40542_RS06585 4ab4a4f10a586660ca02575220eabe2b 407 Gene3D G3DSA:3.20.20.450 82 182 3.9E-11 T 11-11-2016 IPR001633 EAL domain S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 528 45.427 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 Gene3D G3DSA:3.40.140.20 376 518 4.1E-61 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 PIRSF PIRSF000414 1 528 4.2E-229 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 SMART SM00798 137 460 1.8E-217 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 SMART SM00851 19 132 1.7E-59 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 Gene3D G3DSA:3.40.140.20 252 371 1.2E-48 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 SUPERFAMILY SSF53927 220 528 2.31E-131 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 528 1.0E-252 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 Pfam PF02142 MGS-like domain 19 132 1.1E-29 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 Gene3D G3DSA:3.40.50.1380 6 190 1.6E-85 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 459 3.0E-120 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 S40542_RS18040 9395d8810c9673023d7d8b57cdbf9619 528 SUPERFAMILY SSF52335 7 197 8.77E-72 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS01915 3399294b762725bdf2d5d5e4e9665f3c 200 Gene3D G3DSA:2.60.370.10 48 174 4.4E-40 T 11-11-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01915 3399294b762725bdf2d5d5e4e9665f3c 200 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 23 165 5.8E-44 T 11-11-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 S40542_RS01915 3399294b762725bdf2d5d5e4e9665f3c 200 SUPERFAMILY SSF110111 49 168 7.72E-37 T 11-11-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01915 3399294b762725bdf2d5d5e4e9665f3c 200 PIRSF PIRSF005413 1 182 2.2E-55 T 11-11-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 S40542_RS18610 48be5dcc4b9905c913d2d4756db29130 250 Pfam PF00535 Glycosyl transferase family 2 3 122 3.5E-36 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 S40542_RS18610 48be5dcc4b9905c913d2d4756db29130 250 SUPERFAMILY SSF53448 1 221 1.18E-53 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18610 48be5dcc4b9905c913d2d4756db29130 250 Gene3D G3DSA:3.90.550.10 2 224 2.2E-51 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS20465 be9a3a77f7f7fd6b7f10589a4caed8eb 274 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 198 273 8.3E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS20465 be9a3a77f7f7fd6b7f10589a4caed8eb 274 Gene3D G3DSA:3.30.1150.10 161 272 1.5E-17 T 11-11-2016 S40542_RS20465 be9a3a77f7f7fd6b7f10589a4caed8eb 274 SUPERFAMILY SSF74653 162 271 5.76E-17 T 11-11-2016 S40542_RS20465 be9a3a77f7f7fd6b7f10589a4caed8eb 274 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 197 273 4.5E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS00620 1019becbd7126bc5a0da8ac0f4dd5390 232 Pfam PF03309 Type III pantothenate kinase 3 185 1.0E-32 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 S40542_RS00620 1019becbd7126bc5a0da8ac0f4dd5390 232 Gene3D G3DSA:3.30.420.40 75 231 1.6E-38 T 11-11-2016 S40542_RS00620 1019becbd7126bc5a0da8ac0f4dd5390 232 SUPERFAMILY SSF53067 1 101 1.25E-16 T 11-11-2016 S40542_RS00620 1019becbd7126bc5a0da8ac0f4dd5390 232 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 222 4.0E-22 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 S40542_RS00620 1019becbd7126bc5a0da8ac0f4dd5390 232 SUPERFAMILY SSF53067 104 227 6.04E-25 T 11-11-2016 S40542_RS00620 1019becbd7126bc5a0da8ac0f4dd5390 232 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 230 16.66 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 S40542_RS16350 ebcbbf65a312b08efe3bf417324fa516 443 Pfam PF02687 FtsX-like permease family 320 436 2.3E-17 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS16350 ebcbbf65a312b08efe3bf417324fa516 443 Pfam PF12704 MacB-like periplasmic core domain 20 272 5.2E-19 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS12855 f6bcbe45cb885d45c3770d227e73b4ef 114 SUPERFAMILY SSF55331 2 113 2.83E-26 T 11-11-2016 IPR014347 Tautomerase/MIF superfamily S40542_RS12855 f6bcbe45cb885d45c3770d227e73b4ef 114 Gene3D G3DSA:3.30.429.10 1 113 4.8E-30 T 11-11-2016 S40542_RS15345 789393a4957f240d00f7b77f30e00c96 287 SUPERFAMILY SSF53850 43 280 4.43E-21 T 11-11-2016 S40542_RS15345 789393a4957f240d00f7b77f30e00c96 287 Gene3D G3DSA:3.40.190.10 151 214 1.8E-4 T 11-11-2016 S40542_RS15345 789393a4957f240d00f7b77f30e00c96 287 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 76 280 5.7E-13 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS05285 6788f9ba0cb83c9b10b56b7d6e38e118 376 PIRSF PIRSF015658 1 376 1.0E-171 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 S40542_RS05285 6788f9ba0cb83c9b10b56b7d6e38e118 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 22 370 5.5E-168 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 S40542_RS05285 6788f9ba0cb83c9b10b56b7d6e38e118 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 374 8.1E-156 T 11-11-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 S40542_RS18315 ce891737a54592c2aeb389611b812785 118 Pfam PF04892 VanZ like family 23 106 7.1E-7 T 11-11-2016 IPR006976 VanZ-like S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 SUPERFAMILY SSF90123 160 451 4.32E-59 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 SUPERFAMILY SSF90123 680 689 4.32E-59 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 Gene3D G3DSA:3.40.50.300 485 701 4.1E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 Pfam PF00005 ABC transporter 505 652 5.5E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 SMART SM00382 512 704 6.3E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 Gene3D G3DSA:1.20.1560.10 160 464 4.1E-67 T 11-11-2016 S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 Pfam PF03412 Peptidase C39 family 16 144 8.2E-38 T 11-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 ProSitePatterns PS00211 ABC transporters family signature. 624 638 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 Gene3D G3DSA:3.90.70.10 22 143 5.7E-25 T 11-11-2016 S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 Pfam PF00664 ABC transporter transmembrane region 174 438 4.3E-40 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS20650 83ed00550f17c2f93a74bac059ea96fe 736 SUPERFAMILY SSF52540 479 700 6.41E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02975 7e09b24e81d89e1385cfabe5b57bde41 326 Gene3D G3DSA:1.25.40.10 126 199 3.4E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02975 7e09b24e81d89e1385cfabe5b57bde41 326 Gene3D G3DSA:1.25.40.10 29 49 3.4E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02975 7e09b24e81d89e1385cfabe5b57bde41 326 SUPERFAMILY SSF48452 110 242 4.12E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 511 9.7E-189 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 Gene3D G3DSA:3.40.449.10 9 198 7.8E-72 T 11-11-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 Gene3D G3DSA:3.90.228.20 321 510 4.5E-107 T 11-11-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 Gene3D G3DSA:3.90.228.20 199 261 4.5E-107 T 11-11-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 SUPERFAMILY SSF68923 6 198 8.2E-75 T 11-11-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 PIRSF PIRSF006294 1 512 2.0E-218 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 236 251 - T 11-11-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 1 512 52.536 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 Pfam PF01293 Phosphoenolpyruvate carboxykinase 8 466 1.9E-199 T 11-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 S40542_RS02050 07f3135b2da81efbd1eff749d2291fcf 512 SUPERFAMILY SSF53795 199 511 3.48E-128 T 11-11-2016 S40542_RS01610 c9fe5015b805b8277fd42ffe7a17f226 135 Pfam PF03724 META domain 27 121 1.6E-17 T 11-11-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 Gene3D G3DSA:3.30.470.20 180 364 3.3E-61 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 SUPERFAMILY SSF51246 302 371 1.96E-17 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 350 36.095 T 11-11-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 SUPERFAMILY SSF52440 1 88 7.48E-15 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 353 1.2E-103 T 11-11-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 Pfam PF02222 ATP-grasp domain 101 278 2.6E-52 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 SUPERFAMILY SSF56059 92 298 3.01E-56 T 11-11-2016 S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 Gene3D G3DSA:3.40.50.20 1 82 6.2E-19 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS10265 c71a58ab1e805ec88716f3599c0b009e 382 Gene3D G3DSA:3.30.1490.20 108 161 1.4E-20 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS00930 ba040fa7812bd91df663e30919c8d6a1 179 SUPERFAMILY SSF55282 4 179 1.72E-80 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00930 ba040fa7812bd91df663e30919c8d6a1 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.217 T 11-11-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS00930 ba040fa7812bd91df663e30919c8d6a1 179 Gene3D G3DSA:3.30.1440.10 2 179 3.1E-81 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00930 ba040fa7812bd91df663e30919c8d6a1 179 PIRSF PIRSF002161 1 179 8.7E-69 T 11-11-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00930 ba040fa7812bd91df663e30919c8d6a1 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-11-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00930 ba040fa7812bd91df663e30919c8d6a1 179 Pfam PF00281 Ribosomal protein L5 24 80 2.2E-28 T 11-11-2016 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00930 ba040fa7812bd91df663e30919c8d6a1 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 8.7E-43 T 11-11-2016 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 Gene3D G3DSA:1.10.287.130 215 279 1.3E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 279 6.3E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 SUPERFAMILY SSF55874 287 432 1.96E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 SUPERFAMILY SSF47384 208 282 2.55E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 SMART SM00387 323 433 2.6E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 SMART SM00304 171 223 2.9E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 SMART SM00388 224 284 3.8E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 431 5.9E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 Gene3D G3DSA:3.30.565.10 286 431 6.3E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 SUPERFAMILY SSF158472 171 220 2.48E-5 T 11-11-2016 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 1.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 1.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 1.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02045 cf4bfec7fcf9b1fafc4a0a4911524db7 433 Pfam PF00672 HAMP domain 157 217 1.2E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS03775 74dabdd34baf05d84a4a5aa3fde08b45 137 SUPERFAMILY SSF52821 28 123 2.23E-19 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS03775 74dabdd34baf05d84a4a5aa3fde08b45 137 Pfam PF00581 Rhodanese-like domain 37 121 1.4E-8 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS03775 74dabdd34baf05d84a4a5aa3fde08b45 137 SMART SM00450 29 126 2.3E-6 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS03775 74dabdd34baf05d84a4a5aa3fde08b45 137 Gene3D G3DSA:3.40.250.10 26 122 1.9E-16 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS01200 80cec8e8b875ceb64f8e07315976acc1 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.5E-47 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01200 80cec8e8b875ceb64f8e07315976acc1 110 SUPERFAMILY SSF54843 1 109 1.12E-42 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 S40542_RS01200 80cec8e8b875ceb64f8e07315976acc1 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.12 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01200 80cec8e8b875ceb64f8e07315976acc1 110 Gene3D G3DSA:3.90.470.10 1 109 8.9E-43 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 S40542_RS01200 80cec8e8b875ceb64f8e07315976acc1 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-11-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01200 80cec8e8b875ceb64f8e07315976acc1 110 Pfam PF00237 Ribosomal protein L22p/L17e 12 107 8.8E-33 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 S40542_RS16980 d5014ed21100dbebbd255d0618ba5667 247 SUPERFAMILY SSF53448 32 200 1.97E-7 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 SUPERFAMILY SSF55486 271 576 2.93E-34 T 11-11-2016 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 Gene3D G3DSA:1.10.390.10 427 595 1.1E-15 T 11-11-2016 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 271 418 1.3E-9 T 11-11-2016 IPR013856 Peptidase M4 domain GO:0004222 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 Gene3D G3DSA:2.60.40.670 839 911 7.8E-7 T 11-11-2016 IPR000601 PKD domain S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 422 581 7.1E-11 T 11-11-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 374 394 2.6E-6 T 11-11-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 431 442 2.6E-6 T 11-11-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 517 533 2.6E-6 T 11-11-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 410 426 2.6E-6 T 11-11-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 Gene3D G3DSA:3.10.170.10 279 422 7.3E-11 T 11-11-2016 IPR013856 Peptidase M4 domain GO:0004222 S40542_RS19875 42dd28bef0ac89948634b2a2b602992b 1102 SUPERFAMILY SSF49299 840 920 5.36E-6 T 11-11-2016 IPR000601 PKD domain S40542_RS17635 a7a9fb6a63600c401bb1c05692c453e6 213 SUPERFAMILY SSF53474 12 208 3.21E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17635 a7a9fb6a63600c401bb1c05692c453e6 213 Gene3D G3DSA:3.40.50.1820 19 190 2.5E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17635 a7a9fb6a63600c401bb1c05692c453e6 213 Pfam PF00561 alpha/beta hydrolase fold 19 129 3.1E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS12390 853ef2a65755a4f6ed8bbbb0dfd7e2ec 113 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 15 110 3.3E-33 T 11-11-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 S40542_RS12390 853ef2a65755a4f6ed8bbbb0dfd7e2ec 113 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 95 1.6E-14 T 11-11-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 S40542_RS08150 9efd433d1f49dccc56503584fca630d1 287 Gene3D G3DSA:3.40.710.10 17 253 1.2E-39 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS08150 9efd433d1f49dccc56503584fca630d1 287 Pfam PF00144 Beta-lactamase 17 252 3.4E-29 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS08150 9efd433d1f49dccc56503584fca630d1 287 SUPERFAMILY SSF56601 17 253 1.24E-41 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 Gene3D G3DSA:2.170.130.10 52 163 7.1E-36 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 Gene3D G3DSA:2.40.170.20 286 348 6.2E-72 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 Gene3D G3DSA:2.40.170.20 380 939 6.2E-72 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 Gene3D G3DSA:2.40.170.20 164 226 6.2E-72 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 Pfam PF00593 TonB dependent receptor 595 938 3.1E-22 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 SUPERFAMILY SSF56935 304 352 3.37E-94 T 11-11-2016 S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 SUPERFAMILY SSF56935 385 939 3.37E-94 T 11-11-2016 S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 SUPERFAMILY SSF56935 33 228 3.37E-94 T 11-11-2016 S40542_RS16060 0c2092720d7c58251cc902815b9bfce5 939 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 161 8.7E-26 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS08655 de4626a499108136347f18482831daae 145 Pfam PF09842 Predicted membrane protein (DUF2069) 16 118 4.0E-31 T 11-11-2016 IPR018643 Protein of unknown function DUF2069, membrane S40542_RS03060 3ae520307b746f53342ac287102723c9 125 Pfam PF12680 SnoaL-like domain 16 93 1.3E-8 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain S40542_RS03060 3ae520307b746f53342ac287102723c9 125 Gene3D G3DSA:3.10.450.50 5 92 5.1E-12 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS03060 3ae520307b746f53342ac287102723c9 125 SUPERFAMILY SSF54427 11 119 4.81E-19 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS16670 f9d8302e2448eae3516c3d52288e8261 156 PIRSF PIRSF028687 7 156 3.8E-39 T 11-11-2016 IPR007293 Flagellar protein FlgP S40542_RS16670 f9d8302e2448eae3516c3d52288e8261 156 Pfam PF02169 LPP20 lipoprotein 56 133 9.4E-10 T 11-11-2016 IPR024952 Lipoprotein LPP20-like S40542_RS12250 ce60b7a49e7457a6c60eabaeb441b482 617 SUPERFAMILY SSF143975 2 431 6.41E-140 T 11-11-2016 S40542_RS12250 ce60b7a49e7457a6c60eabaeb441b482 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 S40542_RS12250 ce60b7a49e7457a6c60eabaeb441b482 617 Pfam PF00920 Dehydratase family 66 610 1.2E-160 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 S40542_RS12250 ce60b7a49e7457a6c60eabaeb441b482 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 518 529 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 S40542_RS12250 ce60b7a49e7457a6c60eabaeb441b482 617 SUPERFAMILY SSF52016 432 612 1.73E-56 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel S40542_RS12250 ce60b7a49e7457a6c60eabaeb441b482 617 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 613 3.0E-289 T 11-11-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 S40542_RS08855 28a07dab8522f715d230f80976db19ea 440 SUPERFAMILY SSF111369 57 310 6.54E-23 T 11-11-2016 S40542_RS08855 28a07dab8522f715d230f80976db19ea 440 Pfam PF13437 HlyD family secretion protein 184 236 2.9E-6 T 11-11-2016 S40542_RS08855 28a07dab8522f715d230f80976db19ea 440 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 383 7.8E-43 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS08855 28a07dab8522f715d230f80976db19ea 440 Gene3D G3DSA:2.40.50.100 73 104 4.9E-12 T 11-11-2016 S40542_RS08855 28a07dab8522f715d230f80976db19ea 440 Gene3D G3DSA:2.40.50.100 181 212 4.9E-12 T 11-11-2016 S40542_RS10950 cf5d1763cfbfc950edeaa834cace6a30 205 SUPERFAMILY SSF56784 7 192 9.49E-33 T 11-11-2016 IPR023214 HAD-like domain S40542_RS10950 cf5d1763cfbfc950edeaa834cace6a30 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 90 186 1.1E-10 T 11-11-2016 IPR023214 HAD-like domain S40542_RS10950 cf5d1763cfbfc950edeaa834cace6a30 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 186 5.0E-13 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS10950 cf5d1763cfbfc950edeaa834cace6a30 205 Gene3D G3DSA:3.40.50.1000 4 201 3.0E-36 T 11-11-2016 IPR023214 HAD-like domain S40542_RS17095 465b62bf497a1720fa98947a1da2ac91 194 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS17095 465b62bf497a1720fa98947a1da2ac91 194 SUPERFAMILY SSF52540 2 179 4.96E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17095 465b62bf497a1720fa98947a1da2ac91 194 Pfam PF00005 ABC transporter 27 150 9.7E-15 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS17095 465b62bf497a1720fa98947a1da2ac91 194 SMART SM00382 25 191 3.7E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS17095 465b62bf497a1720fa98947a1da2ac91 194 Gene3D G3DSA:3.40.50.300 1 177 5.5E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07765 1076ba353009544f35285cdcbce9974e 236 Gene3D G3DSA:3.40.190.10 11 94 2.0E-13 T 11-11-2016 S40542_RS07765 1076ba353009544f35285cdcbce9974e 236 Gene3D G3DSA:3.40.190.10 194 233 2.0E-13 T 11-11-2016 S40542_RS07765 1076ba353009544f35285cdcbce9974e 236 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 14 232 2.0E-20 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS07765 1076ba353009544f35285cdcbce9974e 236 SUPERFAMILY SSF53850 11 233 7.39E-31 T 11-11-2016 S40542_RS07765 1076ba353009544f35285cdcbce9974e 236 SMART SM00062 10 236 0.0037 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 18 217 19.209 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 PIRSF PIRSF017184 15 495 3.2E-121 T 11-11-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 435 445 - T 11-11-2016 IPR017953 Carbohydrate kinase, predicted, conserved site S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 236 493 2.6E-68 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 232 495 21.496 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 SUPERFAMILY SSF53613 234 494 2.5E-72 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 Gene3D G3DSA:3.40.1190.20 234 494 4.9E-83 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 Pfam PF01256 Carbohydrate kinase 255 490 7.4E-62 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 SUPERFAMILY SSF64153 25 254 2.62E-49 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 25 216 2.2E-36 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 Gene3D G3DSA:3.40.50.10260 19 217 2.2E-51 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 Pfam PF03853 YjeF-related protein N-terminus 39 196 4.0E-37 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 S40542_RS04070 8b11631e65448da7d3997eb887655d1d 495 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 322 332 - T 11-11-2016 IPR017953 Carbohydrate kinase, predicted, conserved site S40542_RS00455 fad3e267c65a9e920fddd0104ccb26c0 262 Gene3D G3DSA:3.60.160.10 1 248 1.3E-100 T 11-11-2016 IPR002838 Mitochondrial biogenesis protein AIM24 S40542_RS00455 fad3e267c65a9e920fddd0104ccb26c0 262 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 7 225 4.6E-35 T 11-11-2016 IPR002838 Mitochondrial biogenesis protein AIM24 S40542_RS00455 fad3e267c65a9e920fddd0104ccb26c0 262 SUPERFAMILY SSF51219 6 244 1.1E-81 T 11-11-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain S40542_RS00455 fad3e267c65a9e920fddd0104ccb26c0 262 Pfam PF01987 Mitochondrial biogenesis AIM24 8 224 1.6E-64 T 11-11-2016 IPR002838 Mitochondrial biogenesis protein AIM24 S40542_RS19275 fb58ad898e4f2d434b07716ca1eadbe7 195 SUPERFAMILY SSF48498 81 188 6.07E-6 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal S40542_RS19275 fb58ad898e4f2d434b07716ca1eadbe7 195 Gene3D G3DSA:1.10.357.10 5 183 5.2E-37 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS19275 fb58ad898e4f2d434b07716ca1eadbe7 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 57 8.0E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS19275 fb58ad898e4f2d434b07716ca1eadbe7 195 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 195 39.798 T 11-11-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 S40542_RS19275 fb58ad898e4f2d434b07716ca1eadbe7 195 SUPERFAMILY SSF46689 5 71 9.93E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS13650 7c35e45f760e676eb9189994ada8e8a9 389 Pfam PF13649 Methyltransferase domain 187 281 6.9E-12 T 11-11-2016 S40542_RS13650 7c35e45f760e676eb9189994ada8e8a9 389 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.8E-15 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13650 7c35e45f760e676eb9189994ada8e8a9 389 Gene3D G3DSA:1.10.1660.10 2 105 4.2E-21 T 11-11-2016 S40542_RS13650 7c35e45f760e676eb9189994ada8e8a9 389 SMART SM00422 2 70 5.1E-17 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13650 7c35e45f760e676eb9189994ada8e8a9 389 Gene3D G3DSA:3.40.50.150 173 388 4.8E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS13650 7c35e45f760e676eb9189994ada8e8a9 389 SUPERFAMILY SSF46955 2 102 9.16E-20 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS13650 7c35e45f760e676eb9189994ada8e8a9 389 SUPERFAMILY SSF53335 135 388 4.8E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS15845 042caf782abd0e8ebd478437e9b2c0b1 267 Pfam PF01578 Cytochrome C assembly protein 41 263 1.2E-27 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 S40542_RS04460 335395e77ab8ce1cb7c16716f3770362 249 Gene3D G3DSA:3.40.1210.10 2 247 1.0E-86 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 S40542_RS04460 335395e77ab8ce1cb7c16716f3770362 249 Pfam PF01975 Survival protein SurE 3 182 1.5E-56 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 S40542_RS04460 335395e77ab8ce1cb7c16716f3770362 249 SUPERFAMILY SSF64167 2 246 5.1E-84 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 S40542_RS04460 335395e77ab8ce1cb7c16716f3770362 249 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 38.97 T 11-11-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 S40542_RS04460 335395e77ab8ce1cb7c16716f3770362 249 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 233 1.9E-71 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 S40542_RS05720 b91bdb8879ddc3f640ade69db7114097 266 Pfam PF00149 Calcineurin-like phosphoesterase 5 138 1.2E-10 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 S40542_RS05720 b91bdb8879ddc3f640ade69db7114097 266 Gene3D G3DSA:3.60.21.10 4 132 6.9E-47 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS05720 b91bdb8879ddc3f640ade69db7114097 266 Gene3D G3DSA:3.60.21.10 169 263 6.9E-47 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS05720 b91bdb8879ddc3f640ade69db7114097 266 SUPERFAMILY SSF56300 2 255 1.44E-45 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS05720 b91bdb8879ddc3f640ade69db7114097 266 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 257 3.9E-70 T 11-11-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 S40542_RS05720 b91bdb8879ddc3f640ade69db7114097 266 PIRSF PIRSF000903 1 266 6.2E-83 T 11-11-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 S40542_RS10315 b27114ec086d93f3301bbdd6929bf016 272 SUPERFAMILY SSF53850 18 242 7.6E-7 T 11-11-2016 S40542_RS10640 75786eafb34d2dbbfe08b1b1adc405bf 618 Gene3D G3DSA:3.40.1090.10 2 365 2.2E-6 T 11-11-2016 S40542_RS05905 3fa0b66c49b73787cdd3ccb093b9f2ba 1037 Pfam PF14102 Capsule biosynthesis CapC 24 156 2.5E-19 T 11-11-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 S40542_RS05905 3fa0b66c49b73787cdd3ccb093b9f2ba 1037 Pfam PF14102 Capsule biosynthesis CapC 213 329 1.4E-10 T 11-11-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 S40542_RS19250 2c15d2ce026cd205911d1ac9ed4c2464 306 SMART SM01131 179 305 9.9E-57 T 11-11-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 S40542_RS19250 2c15d2ce026cd205911d1ac9ed4c2464 306 Gene3D G3DSA:3.90.1640.10 3 184 1.4E-57 T 11-11-2016 S40542_RS19250 2c15d2ce026cd205911d1ac9ed4c2464 306 SUPERFAMILY SSF64182 4 305 3.27E-73 T 11-11-2016 S40542_RS19250 2c15d2ce026cd205911d1ac9ed4c2464 306 Pfam PF02833 DHHA2 domain 180 304 5.1E-20 T 11-11-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 S40542_RS19250 2c15d2ce026cd205911d1ac9ed4c2464 306 Pfam PF01368 DHH family 3 143 9.0E-19 T 11-11-2016 IPR001667 DDH domain S40542_RS18855 a74f3ab83a01fea48a0615049e83b12c 381 Pfam PF00155 Aminotransferase class I and II 57 361 2.3E-12 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS18855 a74f3ab83a01fea48a0615049e83b12c 381 SUPERFAMILY SSF53383 39 378 2.76E-33 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS18855 a74f3ab83a01fea48a0615049e83b12c 381 Gene3D G3DSA:3.40.640.10 40 255 9.8E-17 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS18855 a74f3ab83a01fea48a0615049e83b12c 381 Gene3D G3DSA:3.90.1150.10 256 373 2.5E-8 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS17050 7b348d4b715415127ecc55994b890629 420 PIRSF PIRSF001563 5 420 1.4E-98 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 S40542_RS17050 7b348d4b715415127ecc55994b890629 420 Gene3D G3DSA:3.90.190.20 286 420 2.0E-32 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS17050 7b348d4b715415127ecc55994b890629 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 11-11-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 S40542_RS17050 7b348d4b715415127ecc55994b890629 420 SUPERFAMILY SSF53623 11 281 7.69E-78 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS17050 7b348d4b715415127ecc55994b890629 420 Pfam PF08245 Mur ligase middle domain 53 196 1.0E-9 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS17050 7b348d4b715415127ecc55994b890629 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 418 5.6E-93 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 S40542_RS17050 7b348d4b715415127ecc55994b890629 420 SUPERFAMILY SSF53244 286 419 1.58E-23 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 S40542_RS17050 7b348d4b715415127ecc55994b890629 420 Gene3D G3DSA:3.40.1190.10 11 282 8.8E-73 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS20125 cf2aab9a206dc35ad2ff18586111caa3 106 Pfam PF01491 Frataxin-like domain 1 100 6.3E-25 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 S40542_RS20125 cf2aab9a206dc35ad2ff18586111caa3 106 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 11-11-2016 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 S40542_RS20125 cf2aab9a206dc35ad2ff18586111caa3 106 SUPERFAMILY SSF55387 1 100 6.28E-34 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 S40542_RS20125 cf2aab9a206dc35ad2ff18586111caa3 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.267 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 S40542_RS20125 cf2aab9a206dc35ad2ff18586111caa3 106 SMART SM01219 1 104 1.4E-48 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 S40542_RS20125 cf2aab9a206dc35ad2ff18586111caa3 106 Gene3D G3DSA:3.30.920.10 1 103 4.0E-30 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 S40542_RS20125 cf2aab9a206dc35ad2ff18586111caa3 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 6.4E-40 T 11-11-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 S40542_RS25080 c1b7b904edc231626465a9f4c4b62135 111 SUPERFAMILY SSF56601 1 111 3.99E-28 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS25080 c1b7b904edc231626465a9f4c4b62135 111 Gene3D G3DSA:3.40.710.10 1 111 1.1E-27 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS25080 c1b7b904edc231626465a9f4c4b62135 111 Pfam PF00905 Penicillin binding protein transpeptidase domain 23 111 1.2E-10 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 Pfam PF13426 PAS domain 6 112 6.9E-15 T 11-11-2016 IPR000014 PAS domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 488 2.8E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 Gene3D G3DSA:3.30.450.20 2 111 8.3E-18 T 11-11-2016 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 Gene3D G3DSA:3.30.450.20 112 239 5.4E-23 T 11-11-2016 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SUPERFAMILY SSF55785 6 119 1.37E-19 T 11-11-2016 IPR000014 PAS domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SMART SM00388 261 329 4.2E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SMART SM00387 371 490 1.3E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SMART SM00086 75 113 3.8 T 11-11-2016 IPR001610 PAC motif S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SMART SM00086 201 241 0.92 T 11-11-2016 IPR001610 PAC motif S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SUPERFAMILY SSF55785 136 248 4.49E-26 T 11-11-2016 IPR000014 PAS domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SMART SM00091 125 191 2.0E-8 T 11-11-2016 IPR000014 PAS domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SMART SM00091 1 61 4.1E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 116 1.1E-17 T 11-11-2016 IPR000014 PAS domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 126 245 8.2E-28 T 11-11-2016 IPR000014 PAS domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 4.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 4.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 4.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 Gene3D G3DSA:1.10.287.130 254 325 7.5E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SUPERFAMILY SSF47384 247 329 3.73E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 Pfam PF00989 PAS fold 125 238 1.7E-12 T 11-11-2016 IPR013767 PAS fold GO:0006355 S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 Gene3D G3DSA:3.30.565.10 328 488 2.6E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07770 b6b73ae57581261a642c390e50f170bb 490 SUPERFAMILY SSF55874 319 488 1.83E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06935 04251566d4e78bcdfa79597d64338210 450 Gene3D G3DSA:3.90.226.10 237 439 1.8E-22 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS06935 04251566d4e78bcdfa79597d64338210 450 SUPERFAMILY SSF52096 241 442 2.98E-31 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS06935 04251566d4e78bcdfa79597d64338210 450 SUPERFAMILY SSF52096 46 144 2.98E-31 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS06935 04251566d4e78bcdfa79597d64338210 450 Pfam PF03572 Peptidase family S41 247 436 7.9E-22 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 ProSitePatterns PS01155 Endonuclease III family signature. 108 137 - T 11-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 TIGRFAM TIGR01083 nth: endonuclease III 11 196 4.5E-67 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 Gene3D G3DSA:1.10.1670.10 129 211 1.0E-29 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 PIRSF PIRSF001435 7 219 3.6E-46 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 SUPERFAMILY SSF48150 8 210 4.87E-64 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 Gene3D G3DSA:1.10.340.30 31 128 4.7E-31 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 Hamap MF_00942 Endonuclease III [nth]. 6 215 34.098 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 174 6.0E-21 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 Pfam PF00633 Helix-hairpin-helix motif 106 132 1.2E-5 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 S40542_RS02910 e10d61c979ee2b56571c57ff21e94dc3 222 SMART SM00478 44 191 1.2E-51 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 S40542_RS20230 7f6d852ea82775490829b26c8464010c 185 Gene3D G3DSA:3.30.1130.10 55 183 6.7E-64 T 11-11-2016 S40542_RS20230 7f6d852ea82775490829b26c8464010c 185 Pfam PF01227 GTP cyclohydrolase I 6 182 3.5E-77 T 11-11-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 S40542_RS20230 7f6d852ea82775490829b26c8464010c 185 Gene3D G3DSA:1.10.286.10 3 52 4.2E-21 T 11-11-2016 S40542_RS20230 7f6d852ea82775490829b26c8464010c 185 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 7 184 6.1E-77 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 S40542_RS20230 7f6d852ea82775490829b26c8464010c 185 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 38.693 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 S40542_RS20230 7f6d852ea82775490829b26c8464010c 185 SUPERFAMILY SSF55620 4 183 1.56E-78 T 11-11-2016 S40542_RS20230 7f6d852ea82775490829b26c8464010c 185 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 S40542_RS00780 a82e2374f22999ceffb037b2c65c0f3b 251 Gene3D G3DSA:1.10.287.460 27 128 2.0E-35 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 S40542_RS00780 a82e2374f22999ceffb037b2c65c0f3b 251 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 154 240 7.3E-29 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 S40542_RS00780 a82e2374f22999ceffb037b2c65c0f3b 251 Gene3D G3DSA:3.10.50.40 129 243 8.8E-47 T 11-11-2016 S40542_RS00780 a82e2374f22999ceffb037b2c65c0f3b 251 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 25 146 3.4E-36 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 S40542_RS00780 a82e2374f22999ceffb037b2c65c0f3b 251 SUPERFAMILY SSF54534 37 242 9.6E-64 T 11-11-2016 S40542_RS05870 5d022198eb0ea11f20d894ad9ea15bc7 348 Gene3D G3DSA:3.10.180.10 3 147 9.5E-34 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS05870 5d022198eb0ea11f20d894ad9ea15bc7 348 Gene3D G3DSA:3.10.180.10 153 348 1.4E-61 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS05870 5d022198eb0ea11f20d894ad9ea15bc7 348 SUPERFAMILY SSF54593 5 335 1.19E-68 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS05870 5d022198eb0ea11f20d894ad9ea15bc7 348 PIRSF PIRSF009283 1 348 1.4E-104 T 11-11-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 S40542_RS05870 5d022198eb0ea11f20d894ad9ea15bc7 348 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 270 1.0E-12 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS05870 5d022198eb0ea11f20d894ad9ea15bc7 348 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 347 1.4E-115 T 11-11-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 S40542_RS05870 5d022198eb0ea11f20d894ad9ea15bc7 348 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 141 8.7E-44 T 11-11-2016 S40542_RS08050 4c17c90a5103045bd941d2c1cc84292e 370 SMART SM00448 3 114 4.8E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08050 4c17c90a5103045bd941d2c1cc84292e 370 Gene3D G3DSA:3.40.50.2300 3 121 7.5E-31 T 11-11-2016 S40542_RS08050 4c17c90a5103045bd941d2c1cc84292e 370 Pfam PF00072 Response regulator receiver domain 5 114 7.5E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08050 4c17c90a5103045bd941d2c1cc84292e 370 SUPERFAMILY SSF52172 2 121 7.12E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS12550 a7a9d2b34de5313287dc14e4596024d8 214 Pfam PF02839 Carbohydrate binding domain 166 204 1.1E-6 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS12550 a7a9d2b34de5313287dc14e4596024d8 214 Gene3D G3DSA:2.10.10.20 162 211 1.1E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS12550 a7a9d2b34de5313287dc14e4596024d8 214 SUPERFAMILY SSF51055 160 210 2.49E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS12550 a7a9d2b34de5313287dc14e4596024d8 214 SMART SM00495 165 207 2.0E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS01000 b9cfe14ab755994ec82c8abf4730f530 197 Gene3D G3DSA:2.40.160.20 34 83 2.5E-5 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS01000 b9cfe14ab755994ec82c8abf4730f530 197 SUPERFAMILY SSF56925 56 187 5.57E-5 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS01000 b9cfe14ab755994ec82c8abf4730f530 197 Pfam PF13505 Outer membrane protein beta-barrel domain 10 183 2.9E-8 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel S40542_RS01000 b9cfe14ab755994ec82c8abf4730f530 197 SUPERFAMILY SSF56925 33 98 3.92E-6 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS05355 20400219c0d8ed3537e42636f648f382 218 SUPERFAMILY SSF53850 28 216 9.99E-11 T 11-11-2016 S40542_RS16020 aed72adae208c4aa5088696c88feb1cc 87 SUPERFAMILY SSF52833 4 81 1.01E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS16020 aed72adae208c4aa5088696c88feb1cc 87 PRINTS PR00160 Glutaredoxin signature 3 21 1.2E-10 T 11-11-2016 IPR014025 Glutaredoxin subgroup S40542_RS16020 aed72adae208c4aa5088696c88feb1cc 87 PRINTS PR00160 Glutaredoxin signature 66 79 1.2E-10 T 11-11-2016 IPR014025 Glutaredoxin subgroup S40542_RS16020 aed72adae208c4aa5088696c88feb1cc 87 PRINTS PR00160 Glutaredoxin signature 52 65 1.2E-10 T 11-11-2016 IPR014025 Glutaredoxin subgroup S40542_RS16020 aed72adae208c4aa5088696c88feb1cc 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 11-11-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 S40542_RS16020 aed72adae208c4aa5088696c88feb1cc 87 Pfam PF00462 Glutaredoxin 4 69 1.7E-15 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 S40542_RS16020 aed72adae208c4aa5088696c88feb1cc 87 Gene3D G3DSA:3.40.30.10 4 81 5.5E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS16020 aed72adae208c4aa5088696c88feb1cc 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 4.3E-41 T 11-11-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 S40542_RS00925 6bd7127ad6034434aae50767de2f2b32 104 SMART SM00739 4 31 4.8E-4 T 11-11-2016 IPR005824 KOW S40542_RS00925 6bd7127ad6034434aae50767de2f2b32 104 Gene3D G3DSA:2.30.30.30 3 93 2.2E-24 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 S40542_RS00925 6bd7127ad6034434aae50767de2f2b32 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 104 1.7E-25 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00925 6bd7127ad6034434aae50767de2f2b32 104 SUPERFAMILY SSF50104 4 102 1.99E-34 T 11-11-2016 IPR008991 Translation protein SH3-like domain S40542_RS00925 6bd7127ad6034434aae50767de2f2b32 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 104 8.7E-40 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00925 6bd7127ad6034434aae50767de2f2b32 104 Pfam PF00467 KOW motif 8 38 6.9E-7 T 11-11-2016 IPR005824 KOW S40542_RS00925 6bd7127ad6034434aae50767de2f2b32 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 20.529 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00925 6bd7127ad6034434aae50767de2f2b32 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-11-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS12565 2aa09da73d3a8b3b9e7a51cf5781e3cc 117 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 111 2.5E-9 T 11-11-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like S40542_RS12565 2aa09da73d3a8b3b9e7a51cf5781e3cc 117 Gene3D G3DSA:3.10.490.10 1 112 8.8E-8 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like S40542_RS12565 2aa09da73d3a8b3b9e7a51cf5781e3cc 117 SUPERFAMILY SSF110857 3 110 1.44E-12 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like S40542_RS03755 9e614ee1ca0584d2d8af9a22d1bc08f4 650 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 12 493 2.6E-187 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 S40542_RS03755 9e614ee1ca0584d2d8af9a22d1bc08f4 650 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 494 1.0E-160 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 S40542_RS03755 9e614ee1ca0584d2d8af9a22d1bc08f4 650 ProSitePatterns PS01303 BCCT family of transporters signature. 312 321 - T 11-11-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 S40542_RS01105 352164cf004052ae94511ea0413554cd 432 Gene3D G3DSA:3.30.565.10 295 427 3.9E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01105 352164cf004052ae94511ea0413554cd 432 SUPERFAMILY SSF55874 313 426 4.32E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01105 352164cf004052ae94511ea0413554cd 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 427 1.4E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01105 352164cf004052ae94511ea0413554cd 432 Gene3D G3DSA:1.10.287.130 221 281 1.1E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01105 352164cf004052ae94511ea0413554cd 432 SUPERFAMILY SSF47384 218 282 6.08E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01105 352164cf004052ae94511ea0413554cd 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 8.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01105 352164cf004052ae94511ea0413554cd 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 8.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01105 352164cf004052ae94511ea0413554cd 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 8.6E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS01105 352164cf004052ae94511ea0413554cd 432 SMART SM00387 325 431 1.0E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 65 76 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 Gene3D G3DSA:3.30.1490.20 109 176 2.4E-20 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 244 272 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 Pfam PF07478 D-ala D-ala ligase C-terminus 105 299 5.9E-60 T 11-11-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 SUPERFAMILY SSF52440 6 98 3.17E-30 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 302 35.725 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 301 5.6E-104 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 Gene3D G3DSA:3.30.470.20 177 301 4.6E-54 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 Gene3D G3DSA:3.30.470.20 87 105 4.6E-54 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 Gene3D G3DSA:3.40.50.20 6 86 1.0E-28 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 Pfam PF01820 D-ala D-ala ligase N-terminus 6 88 3.7E-22 T 11-11-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 PIRSF PIRSF039102 43 302 4.7E-88 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS18730 ada847e565be1e753c004e734aab49b3 302 SUPERFAMILY SSF56059 99 298 5.66E-54 T 11-11-2016 S40542_RS19835 924d07325a063c082fda2e2f1a5ca01b 152 SUPERFAMILY SSF158682 14 145 6.67E-29 T 11-11-2016 IPR029024 TerB-like S40542_RS19835 924d07325a063c082fda2e2f1a5ca01b 152 Pfam PF05099 Tellurite resistance protein TerB 13 141 2.9E-36 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal S40542_RS19835 924d07325a063c082fda2e2f1a5ca01b 152 Gene3D G3DSA:1.10.3680.10 15 141 1.1E-22 T 11-11-2016 IPR029024 TerB-like S40542_RS08985 365f5ef87ec6544812af20992c7da8a6 241 Pfam PF13649 Methyltransferase domain 61 157 1.6E-12 T 11-11-2016 S40542_RS08985 365f5ef87ec6544812af20992c7da8a6 241 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 7 241 2.9E-101 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 S40542_RS08985 365f5ef87ec6544812af20992c7da8a6 241 Gene3D G3DSA:3.40.50.150 18 241 1.4E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS08985 365f5ef87ec6544812af20992c7da8a6 241 SUPERFAMILY SSF53335 19 241 6.66E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS08985 365f5ef87ec6544812af20992c7da8a6 241 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 241 40.326 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 S40542_RS08985 365f5ef87ec6544812af20992c7da8a6 241 PIRSF PIRSF006325 1 241 1.1E-105 T 11-11-2016 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 S40542_RS02120 a27cdfd73a0419a3d55228ebbaa02653 252 Pfam PF01203 Type II secretion system (T2SS), protein N 38 250 1.9E-50 T 11-11-2016 IPR022792 Type II secretion system, protein N S40542_RS17385 03cc402d34db00d05a7f308ece71413e 350 Pfam PF03116 NQR2, RnfD, RnfE family 5 345 3.3E-102 T 11-11-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 S40542_RS17385 03cc402d34db00d05a7f308ece71413e 350 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 347 27.229 T 11-11-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 S40542_RS17385 03cc402d34db00d05a7f308ece71413e 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 346 4.8E-128 T 11-11-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.1E-27 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 SMART SM00448 3 116 3.0E-43 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 SUPERFAMILY SSF46894 130 226 1.16E-31 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.5E-112 T 11-11-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 SMART SM00862 150 225 8.2E-29 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 SUPERFAMILY SSF52172 2 125 5.12E-42 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 Gene3D G3DSA:3.40.50.2300 2 126 7.3E-42 T 11-11-2016 S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 Gene3D G3DSA:1.10.10.10 129 226 7.8E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03595 b81a9f8679e1ced0ae106af538afbf65 229 Pfam PF00072 Response regulator receiver domain 5 117 2.7E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15550 25cc56140bddb11cade69a6466896c2d 119 Pfam PF04355 SmpA / OmlA family 35 102 1.6E-19 T 11-11-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 S40542_RS15550 25cc56140bddb11cade69a6466896c2d 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 8 114 23.502 T 11-11-2016 IPR026592 Outer membrane protein assembly factor BamE S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 342 758 1.6E-91 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 SUPERFAMILY SSF55545 205 341 1.7E-24 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 SUPERFAMILY SSF49384 29 195 2.51E-45 T 11-11-2016 IPR008965 Carbohydrate-binding domain GO:0030246 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 PRINTS PR00738 Glycosyl hydrolase family 20 signature 300 320 7.6E-39 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 PRINTS PR00738 Glycosyl hydrolase family 20 signature 336 353 7.6E-39 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 PRINTS PR00738 Glycosyl hydrolase family 20 signature 722 738 7.6E-39 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 PRINTS PR00738 Glycosyl hydrolase family 20 signature 740 757 7.6E-39 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 PRINTS PR00738 Glycosyl hydrolase family 20 signature 365 386 7.6E-39 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 PRINTS PR00738 Glycosyl hydrolase family 20 signature 508 526 7.6E-39 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 PRINTS PR00738 Glycosyl hydrolase family 20 signature 442 459 7.6E-39 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 PRINTS PR00738 Glycosyl hydrolase family 20 signature 535 548 7.6E-39 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 Gene3D G3DSA:2.60.40.320 814 862 9.7E-17 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 Gene3D G3DSA:2.60.40.290 30 161 2.6E-35 T 11-11-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 338 2.6E-19 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 SUPERFAMILY SSF51445 342 763 2.78E-125 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 786 861 6.7E-16 T 11-11-2016 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 Gene3D G3DSA:3.30.379.10 211 338 5.8E-26 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 SUPERFAMILY SSF81296 762 863 2.38E-24 T 11-11-2016 IPR014756 Immunoglobulin E-set S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 SMART SM01081 37 192 9.9E-46 T 11-11-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 Gene3D G3DSA:3.20.20.80 340 813 4.9E-138 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 S40542_RS18685 6c980b3e5d6d970d00735b50a64a62d1 865 Pfam PF03173 Putative carbohydrate binding domain 53 189 3.5E-34 T 11-11-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.5E-53 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 SUPERFAMILY SSF52021 4 142 1.01E-57 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 SMART SM01097 3 133 7.9E-94 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 Gene3D G3DSA:3.50.30.20 3 145 6.5E-63 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 2.5E-40 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 2.5E-40 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 2.5E-40 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 2.5E-40 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 2.5E-40 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00097 Anthranilate synthase component II signature 235 244 8.7E-6 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00097 Anthranilate synthase component II signature 348 361 8.7E-6 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00097 Anthranilate synthase component II signature 263 274 8.7E-6 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 374 2.0E-149 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 SUPERFAMILY SSF52317 153 376 3.52E-61 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 2.5E-11 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 2.5E-11 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 2.5E-11 T 11-11-2016 S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 Pfam PF00117 Glutamine amidotransferase class-I 196 371 9.2E-50 T 11-11-2016 IPR017926 Glutamine amidotransferase S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 Gene3D G3DSA:3.40.50.880 154 375 2.7E-81 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS09140 e27dee04375ab073827b8adf2b23b7c4 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 377 48.82 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 S40542_RS01965 dce766b9240d1a723b5b4bf7fb459cf2 168 SMART SM00260 17 158 1.4E-33 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01965 dce766b9240d1a723b5b4bf7fb459cf2 168 Gene3D G3DSA:2.40.50.180 59 103 4.8E-7 T 11-11-2016 S40542_RS01965 dce766b9240d1a723b5b4bf7fb459cf2 168 Gene3D G3DSA:2.30.30.40 104 152 2.1E-4 T 11-11-2016 S40542_RS01965 dce766b9240d1a723b5b4bf7fb459cf2 168 Pfam PF01584 CheW-like domain 21 159 1.1E-31 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01965 dce766b9240d1a723b5b4bf7fb459cf2 168 SUPERFAMILY SSF50341 14 159 2.62E-35 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01285 856ac47e5fff8db969842cdac24f7f57 348 Pfam PF13528 Glycosyl transferase family 1 1 301 4.4E-37 T 11-11-2016 S40542_RS01285 856ac47e5fff8db969842cdac24f7f57 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 302 8.0E-73 T 11-11-2016 IPR005262 Conserved hypothetical protein CHP00661 S40542_RS01285 856ac47e5fff8db969842cdac24f7f57 348 SUPERFAMILY SSF53756 1 298 3.45E-9 T 11-11-2016 S40542_RS01285 856ac47e5fff8db969842cdac24f7f57 348 Gene3D G3DSA:3.40.50.2000 235 301 1.4E-4 T 11-11-2016 S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 Pfam PF12804 MobA-like NTP transferase domain 6 129 6.3E-22 T 11-11-2016 IPR025877 MobA-like NTP transferase S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 1.6E-191 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 SUPERFAMILY SSF53448 1 246 1.69E-64 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 Gene3D G3DSA:2.160.10.10 322 451 2.4E-32 T 11-11-2016 S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.533 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 Gene3D G3DSA:2.160.10.10 243 321 3.2E-19 T 11-11-2016 S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 296 6.8E-7 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 Gene3D G3DSA:3.90.550.10 1 242 1.9E-72 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 SUPERFAMILY SSF51161 252 435 9.76E-52 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS20610 08c9623124737304744b9eb4dd31ab70 453 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 392 425 1.9E-8 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SUPERFAMILY SSF48452 150 339 1.05E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 Gene3D G3DSA:1.25.40.10 66 162 5.2E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 Gene3D G3DSA:1.25.40.10 163 326 1.3E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 613 1.2E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 1.2E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 627 1.2E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 1.2E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 Pfam PF13424 Tetratricopeptide repeat 111 171 3.7E-7 T 11-11-2016 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 Pfam PF13424 Tetratricopeptide repeat 185 257 2.1E-12 T 11-11-2016 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SMART SM00387 559 670 5.0E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SUPERFAMILY SSF55874 524 668 1.57E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SMART SM00028 186 219 1.4E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SMART SM00028 106 139 270.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SMART SM00028 226 259 0.55 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SMART SM00028 146 179 230.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SUPERFAMILY SSF48452 66 174 1.17E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 Gene3D G3DSA:3.30.565.10 557 669 7.0E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 SUPERFAMILY SSF47384 430 470 1.86E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 669 1.9E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS07345 86d18df865c6e14d05e569afa530a1d9 670 Gene3D G3DSA:1.10.287.130 431 495 1.2E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS11110 f019ac0eeb94dc1d1c751551c4a57528 502 Gene3D G3DSA:2.120.10.30 114 233 6.1E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS11110 f019ac0eeb94dc1d1c751551c4a57528 502 SUPERFAMILY SSF141072 290 396 1.44E-13 T 11-11-2016 S40542_RS11110 f019ac0eeb94dc1d1c751551c4a57528 502 SUPERFAMILY SSF63825 59 81 2.62E-11 T 11-11-2016 S40542_RS11110 f019ac0eeb94dc1d1c751551c4a57528 502 SUPERFAMILY SSF63825 113 276 2.62E-11 T 11-11-2016 S40542_RS19625 dbdf4957aa3abd35523256db73922daa 145 Gene3D G3DSA:3.50.80.10 4 143 2.6E-55 T 11-11-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain S40542_RS19625 dbdf4957aa3abd35523256db73922daa 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.592 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 S40542_RS19625 dbdf4957aa3abd35523256db73922daa 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 143 1.6E-51 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 S40542_RS19625 dbdf4957aa3abd35523256db73922daa 145 SUPERFAMILY SSF69500 3 143 1.26E-53 T 11-11-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain S40542_RS19625 dbdf4957aa3abd35523256db73922daa 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 4 144 8.3E-61 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 6.7E-54 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 6.7E-54 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 6.7E-54 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 6.7E-54 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 6.7E-54 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 Gene3D G3DSA:3.40.630.10 171 495 3.9E-136 T 11-11-2016 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 Gene3D G3DSA:3.40.220.10 1 161 9.1E-66 T 11-11-2016 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 39.567 T 11-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 SUPERFAMILY SSF52949 1 183 4.36E-50 T 11-11-2016 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.1E-32 T 11-11-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 SUPERFAMILY SSF53187 180 495 9.42E-123 T 11-11-2016 S40542_RS04490 555ac4d6e083d613bf3b9a56d5885246 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 487 5.0E-117 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 SUPERFAMILY SSF81901 638 733 4.58E-18 T 11-11-2016 S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 Gene3D G3DSA:1.25.40.10 614 735 5.2E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 Pfam PF00326 Prolyl oligopeptidase family 411 617 3.5E-33 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 SUPERFAMILY SSF53474 366 616 2.04E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 SMART SM00671 633 669 110.0 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 SMART SM00671 670 705 3.8E-6 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 SMART SM00671 706 741 220.0 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 Gene3D G3DSA:3.40.50.1820 329 613 5.1E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 Gene3D G3DSA:3.40.50.1820 32 48 5.1E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 Pfam PF08238 Sel1 repeat 642 666 130.0 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 Pfam PF08238 Sel1 repeat 674 705 3.1E-4 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS08125 c35d711270fc8d65e0bb5baddc5534b6 939 Pfam PF08238 Sel1 repeat 712 731 210.0 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS08260 d3a621a50d909479b62ed262dc08c24b 161 Gene3D G3DSA:2.170.170.11 16 160 5.6E-35 T 11-11-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 S40542_RS08260 d3a621a50d909479b62ed262dc08c24b 161 SUPERFAMILY SSF51645 21 120 7.46E-14 T 11-11-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 S40542_RS13915 0d529488369cc92739597c0f10bf4600 663 Gene3D G3DSA:1.10.287.950 410 628 9.4E-51 T 11-11-2016 S40542_RS13915 0d529488369cc92739597c0f10bf4600 663 SMART SM00283 396 657 4.1E-64 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS13915 0d529488369cc92739597c0f10bf4600 663 SUPERFAMILY SSF58104 370 658 3.31E-63 T 11-11-2016 S40542_RS13915 0d529488369cc92739597c0f10bf4600 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 656 2.3E-45 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS13915 0d529488369cc92739597c0f10bf4600 663 Gene3D G3DSA:3.30.450.20 171 305 3.2E-5 T 11-11-2016 S40542_RS00710 6d15b1f8ce02e52b441b100ce41a9672 187 SUPERFAMILY SSF55811 4 183 9.75E-36 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS00710 6d15b1f8ce02e52b441b100ce41a9672 187 Pfam PF00293 NUDIX domain 50 153 3.7E-13 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS00710 6d15b1f8ce02e52b441b100ce41a9672 187 Gene3D G3DSA:3.90.79.10 11 183 1.5E-40 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 Gene3D G3DSA:3.40.50.2300 1 109 5.9E-32 T 11-11-2016 S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 Gene3D G3DSA:3.40.50.180 157 341 3.8E-72 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 SUPERFAMILY SSF52172 1 108 1.32E-30 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 Pfam PF00072 Response regulator receiver domain 4 108 1.9E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 SMART SM00448 2 114 1.2E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 Pfam PF01339 CheB methylesterase 161 337 1.2E-55 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 342 38.098 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 SUPERFAMILY SSF52738 157 341 3.4E-62 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS01985 a4de5e04dff5504a5bcdb14ae3944d60 343 PIRSF PIRSF000876 1 343 1.1E-127 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS01380 b7bd8887d4db5d44c476699f4a58cd73 356 Gene3D G3DSA:3.40.50.1970 3 170 1.1E-66 T 11-11-2016 S40542_RS01380 b7bd8887d4db5d44c476699f4a58cd73 356 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 356 42.339 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 S40542_RS01380 b7bd8887d4db5d44c476699f4a58cd73 356 PIRSF PIRSF001455 3 354 4.6E-112 T 11-11-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 S40542_RS01380 b7bd8887d4db5d44c476699f4a58cd73 356 Pfam PF01761 3-dehydroquinate synthase 65 323 2.9E-111 T 11-11-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 S40542_RS01380 b7bd8887d4db5d44c476699f4a58cd73 356 Gene3D G3DSA:1.20.1090.10 171 351 4.1E-66 T 11-11-2016 S40542_RS01380 b7bd8887d4db5d44c476699f4a58cd73 356 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 350 1.7E-122 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 S40542_RS01380 b7bd8887d4db5d44c476699f4a58cd73 356 SUPERFAMILY SSF56796 5 351 7.98E-118 T 11-11-2016 S40542_RS19890 542dc42a0b86fed94d24759bfc549367 289 SUPERFAMILY SSF117074 193 268 7.06E-6 T 11-11-2016 S40542_RS06540 0661618b232d96e1302e606ebb16215f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.9E-58 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06540 0661618b232d96e1302e606ebb16215f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.9E-58 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06540 0661618b232d96e1302e606ebb16215f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.9E-58 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06540 0661618b232d96e1302e606ebb16215f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.9E-58 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06540 0661618b232d96e1302e606ebb16215f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.9E-58 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06540 0661618b232d96e1302e606ebb16215f 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.9E-58 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06540 0661618b232d96e1302e606ebb16215f 245 Pfam PF01578 Cytochrome C assembly protein 27 184 2.2E-34 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 S40542_RS06540 0661618b232d96e1302e606ebb16215f 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 8.6E-77 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS20305 130c353724e311f4e32ecc8271fe8966 369 Gene3D G3DSA:3.40.640.10 29 260 3.2E-39 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS20305 130c353724e311f4e32ecc8271fe8966 369 SUPERFAMILY SSF53383 5 368 2.29E-63 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS20305 130c353724e311f4e32ecc8271fe8966 369 Pfam PF00266 Aminotransferase class-V 99 364 7.3E-27 T 11-11-2016 IPR000192 Aminotransferase class V domain S40542_RS20305 130c353724e311f4e32ecc8271fe8966 369 Gene3D G3DSA:3.90.1150.10 261 369 1.1E-7 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 1 410 49.031 T 11-11-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 Gene3D G3DSA:3.40.50.300 1 211 1.3E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 Pfam PF00270 DEAD/DEAH box helicase 25 194 2.1E-43 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.5E-31 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 SMART SM00487 20 222 3.8E-53 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 Gene3D G3DSA:3.40.50.300 212 373 2.0E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 SUPERFAMILY SSF52540 75 357 3.8E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05105 1f235ea2ba5d2615d978ac554f616422 410 SMART SM00490 256 340 2.1E-31 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS05515 fb788cfb7dcdd8f1983d7e8e67f0b3c6 325 SUPERFAMILY SSF49879 19 94 7.27E-18 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 S40542_RS05515 fb788cfb7dcdd8f1983d7e8e67f0b3c6 325 SMART SM00240 18 68 1.1E-10 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 S40542_RS05515 fb788cfb7dcdd8f1983d7e8e67f0b3c6 325 Pfam PF00498 FHA domain 21 84 1.4E-13 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 S40542_RS05515 fb788cfb7dcdd8f1983d7e8e67f0b3c6 325 Gene3D G3DSA:2.60.200.20 15 87 6.6E-17 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 S40542_RS16055 dce70e3d71b35a9d6464adda6f2ef74a 158 SUPERFAMILY SSF46689 13 134 2.96E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16055 dce70e3d71b35a9d6464adda6f2ef74a 158 Pfam PF13551 Winged helix-turn helix 26 84 3.2E-8 T 11-11-2016 S40542_RS16055 dce70e3d71b35a9d6464adda6f2ef74a 158 Gene3D G3DSA:1.10.10.10 34 65 6.4E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS16055 dce70e3d71b35a9d6464adda6f2ef74a 158 Pfam PF13592 Winged helix-turn helix 101 155 8.6E-15 T 11-11-2016 IPR025959 Winged helix-turn helix domain S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 SMART SM00052 556 802 1.5E-118 T 11-11-2016 IPR001633 EAL domain S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 SUPERFAMILY SSF55785 252 372 1.2E-9 T 11-11-2016 IPR000014 PAS domain S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 Gene3D G3DSA:3.30.70.270 387 553 2.6E-57 T 11-11-2016 S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 SUPERFAMILY SSF141868 561 811 6.02E-90 T 11-11-2016 IPR001633 EAL domain S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 Pfam PF00990 Diguanylate cyclase, GGDEF domain 385 542 3.0E-49 T 11-11-2016 IPR000160 GGDEF domain S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 SMART SM00267 374 546 1.1E-60 T 11-11-2016 IPR000160 GGDEF domain S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 Gene3D G3DSA:3.30.450.20 256 374 5.7E-12 T 11-11-2016 S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 Pfam PF00563 EAL domain 562 797 9.1E-75 T 11-11-2016 IPR001633 EAL domain S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 Gene3D G3DSA:3.20.20.450 559 809 3.6E-93 T 11-11-2016 IPR001633 EAL domain S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 SUPERFAMILY SSF55073 390 548 1.02E-49 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS01775 ebf03c7e1f112f3a5d3ed6650c8ae2b8 827 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 384 544 1.8E-43 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 PRINTS PR01576 Peptide deformylase signature 33 62 1.6E-35 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 PRINTS PR01576 Peptide deformylase signature 101 119 1.6E-35 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 PRINTS PR01576 Peptide deformylase signature 120 149 1.6E-35 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 PRINTS PR01576 Peptide deformylase signature 89 100 1.6E-35 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 SUPERFAMILY SSF56420 3 164 8.77E-60 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 4.9E-61 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 PIRSF PIRSF004749 1 168 7.9E-53 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 Gene3D G3DSA:3.90.45.10 5 164 1.9E-63 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 Pfam PF01327 Polypeptide deformylase 5 152 2.2E-50 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS00095 e7eecb932ed0acf2c928e1fd3fc60963 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.266 T 11-11-2016 IPR023635 Peptide deformylase S40542_RS15350 35c2086407d39324fc8042735b72c63d 221 Gene3D G3DSA:3.20.20.70 28 121 2.2E-8 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS15350 35c2086407d39324fc8042735b72c63d 221 SUPERFAMILY SSF102114 22 118 7.32E-9 T 11-11-2016 S40542_RS15350 35c2086407d39324fc8042735b72c63d 221 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 221 35.306 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 S40542_RS15350 35c2086407d39324fc8042735b72c63d 221 Pfam PF13394 4Fe-4S single cluster domain 23 127 2.3E-14 T 11-11-2016 S40542_RS15350 35c2086407d39324fc8042735b72c63d 221 PIRSF PIRSF000370 1 221 7.9E-64 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 S40542_RS15350 35c2086407d39324fc8042735b72c63d 221 Pfam PF04055 Radical SAM superfamily 25 123 3.8E-12 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS15350 35c2086407d39324fc8042735b72c63d 221 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 1.4E-108 T 11-11-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 S40542_RS15100 436b880011c29dd6fba54319d98204af 161 Gene3D G3DSA:3.40.630.30 14 157 2.1E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15100 436b880011c29dd6fba54319d98204af 161 SUPERFAMILY SSF55729 15 155 7.39E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15100 436b880011c29dd6fba54319d98204af 161 Pfam PF00583 Acetyltransferase (GNAT) family 61 138 7.0E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 Pfam PF03486 HI0933-like protein 4 393 1.6E-145 T 11-11-2016 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 SUPERFAMILY SSF160996 191 339 3.01E-44 T 11-11-2016 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 Gene3D G3DSA:3.50.50.60 340 393 1.1E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 Gene3D G3DSA:3.50.50.60 3 187 1.1E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.4E-7 T 11-11-2016 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 6.4E-7 T 11-11-2016 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 6.4E-7 T 11-11-2016 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 393 2.0E-127 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 Gene3D G3DSA:1.10.8.260 271 323 1.5E-17 T 11-11-2016 IPR023166 HI0933 insert-like domain S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 Gene3D G3DSA:2.40.30.10 190 270 9.8E-29 T 11-11-2016 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 SUPERFAMILY SSF51905 338 393 3.57E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS03825 13fb927fd1d1f38067cf91e0b3b36ea9 395 SUPERFAMILY SSF51905 2 189 3.57E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS03275 2a8a5e2f81231345cb523541c7ce726a 241 Gene3D G3DSA:3.40.50.150 64 196 7.2E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03275 2a8a5e2f81231345cb523541c7ce726a 241 SUPERFAMILY SSF53335 17 239 1.89E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03275 2a8a5e2f81231345cb523541c7ce726a 241 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 54 240 5.1E-73 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 S40542_RS03275 2a8a5e2f81231345cb523541c7ce726a 241 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 240 30.931 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 S40542_RS03275 2a8a5e2f81231345cb523541c7ce726a 241 Pfam PF02390 Putative methyltransferase 66 235 3.7E-64 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 S40542_RS18625 f53e6af0a9de5d93d238fc5c64ac966f 364 Pfam PF13439 Glycosyltransferase Family 4 13 185 4.6E-8 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 S40542_RS18625 f53e6af0a9de5d93d238fc5c64ac966f 364 Pfam PF13692 Glycosyl transferases group 1 197 308 4.7E-16 T 11-11-2016 S40542_RS18625 f53e6af0a9de5d93d238fc5c64ac966f 364 SUPERFAMILY SSF53756 3 333 6.8E-41 T 11-11-2016 S40542_RS18625 f53e6af0a9de5d93d238fc5c64ac966f 364 Gene3D G3DSA:3.40.50.2000 166 300 5.2E-13 T 11-11-2016 S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 Pfam PF12137 RNA polymerase recycling family C-terminal 601 962 1.4E-145 T 11-11-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 Pfam PF00271 Helicase conserved C-terminal domain 488 597 1.5E-14 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 963 67.506 T 11-11-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 Pfam PF00176 SNF2 family N-terminal domain 173 387 3.5E-13 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 SUPERFAMILY SSF52540 476 650 7.27E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 SUPERFAMILY SSF52540 270 336 7.27E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 Gene3D G3DSA:3.40.50.300 153 317 1.7E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 Gene3D G3DSA:3.40.50.300 483 629 2.1E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 SMART SM00490 513 597 2.0E-14 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 SUPERFAMILY SSF52540 142 378 6.64E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02495 7a24b205feed87b042e6303348bb37df 965 SMART SM00487 149 341 2.4E-16 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS04365 fd4c3476feb9602c5df787bf13e59be9 506 SUPERFAMILY SSF53335 10 505 2.67E-139 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS04365 fd4c3476feb9602c5df787bf13e59be9 506 Pfam PF12161 HsdM N-terminal domain 12 145 5.3E-25 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain S40542_RS04365 fd4c3476feb9602c5df787bf13e59be9 506 Gene3D G3DSA:3.40.50.150 185 426 7.5E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS04365 fd4c3476feb9602c5df787bf13e59be9 506 Pfam PF02384 N-6 DNA Methylase 160 469 1.6E-106 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 S40542_RS04365 fd4c3476feb9602c5df787bf13e59be9 506 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 489 5.1E-87 T 11-11-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 S40542_RS04365 fd4c3476feb9602c5df787bf13e59be9 506 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 183 199 2.4E-13 T 11-11-2016 S40542_RS04365 fd4c3476feb9602c5df787bf13e59be9 506 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 221 2.4E-13 T 11-11-2016 S40542_RS04365 fd4c3476feb9602c5df787bf13e59be9 506 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 286 298 2.4E-13 T 11-11-2016 S40542_RS09945 0e863b2f6b1cf7b218bc7d8282940c86 365 Pfam PF00144 Beta-lactamase 30 353 6.8E-53 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS09945 0e863b2f6b1cf7b218bc7d8282940c86 365 SUPERFAMILY SSF56601 26 350 9.45E-65 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS09945 0e863b2f6b1cf7b218bc7d8282940c86 365 Gene3D G3DSA:3.40.710.10 28 358 2.2E-62 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 7 529 1.2E-295 T 11-11-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 173 2.7E-18 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 Pfam PF00009 Elongation factor Tu GTP binding domain 14 277 5.3E-46 T 11-11-2016 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 Gene3D G3DSA:3.40.50.300 7 283 5.5E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 Gene3D G3DSA:3.30.70.870 395 464 7.5E-14 T 11-11-2016 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 SUPERFAMILY SSF52540 10 277 2.16E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 SUPERFAMILY SSF50447 262 393 1.37E-27 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 6.3E-9 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 Gene3D G3DSA:2.40.30.10 292 394 2.0E-25 T 11-11-2016 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 513 6.0E-46 T 11-11-2016 IPR032090 Peptide chain release factor 3, C-terminal S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.697 T 11-11-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 S40542_RS02385 146d015aff2db7fa7aceb8af3a00361c 529 SUPERFAMILY SSF54980 393 468 1.19E-16 T 11-11-2016 IPR009022 Elongation factor G, III-V domain S40542_RS03935 cfb770289e68ca59e69d2a3717c33565 378 SUPERFAMILY SSF88946 6 96 7.06E-19 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS03935 cfb770289e68ca59e69d2a3717c33565 378 Gene3D G3DSA:1.10.1740.10 8 99 6.4E-21 T 11-11-2016 S40542_RS03935 cfb770289e68ca59e69d2a3717c33565 378 Pfam PF04542 Sigma-70 region 2 25 91 1.4E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS03935 cfb770289e68ca59e69d2a3717c33565 378 SUPERFAMILY SSF88659 126 184 1.74E-10 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS03935 cfb770289e68ca59e69d2a3717c33565 378 Gene3D G3DSA:1.10.10.10 122 184 3.3E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03935 cfb770289e68ca59e69d2a3717c33565 378 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 184 6.6E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS03935 cfb770289e68ca59e69d2a3717c33565 378 Pfam PF08281 Sigma-70, region 4 130 180 9.5E-9 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS13365 46a6c26dbefb6034d6bd7caf5ce7ae4d 738 SUPERFAMILY SSF51126 96 345 2.02E-8 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor S40542_RS17655 bfd7b3987a5ce9a80a84e9b841ff2956 124 PIRSF PIRSF005610 1 119 7.7E-19 T 11-11-2016 IPR007360 Invasion gene expression up-regulator, SirB S40542_RS17655 bfd7b3987a5ce9a80a84e9b841ff2956 124 Pfam PF04247 Invasion gene expression up-regulator, SirB 3 120 1.8E-31 T 11-11-2016 IPR007360 Invasion gene expression up-regulator, SirB S40542_RS06520 5caf803ae892ab81e9e94ac1a362934e 98 SUPERFAMILY SSF160544 4 79 2.75E-18 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal S40542_RS06520 5caf803ae892ab81e9e94ac1a362934e 98 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 75 1.7E-14 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 S40542_RS06520 5caf803ae892ab81e9e94ac1a362934e 98 Gene3D G3DSA:3.40.1690.10 4 79 7.3E-19 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal S40542_RS15735 de38bc2d3d7cc29b60737e4cd3cbacfb 168 SUPERFAMILY SSF158442 15 159 4.32E-39 T 11-11-2016 S40542_RS15735 de38bc2d3d7cc29b60737e4cd3cbacfb 168 Gene3D G3DSA:1.20.1550.10 1 160 6.4E-50 T 11-11-2016 IPR023380 Disulphide bond formation protein DsbB-like domain S40542_RS15735 de38bc2d3d7cc29b60737e4cd3cbacfb 168 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 19.722 T 11-11-2016 IPR022920 Disulphide bond formation protein DsbB S40542_RS15735 de38bc2d3d7cc29b60737e4cd3cbacfb 168 Pfam PF02600 Disulfide bond formation protein DsbB 13 158 3.6E-39 T 11-11-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 24.223 T 11-11-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 Pfam PF02096 60Kd inner membrane protein 353 532 2.4E-61 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 166 186 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 77 98 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 251 266 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 218 236 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 461 483 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 498 521 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 323 343 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR00701 60kDa inner membrane protein signature 414 437 1.2E-91 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 9.7E-107 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 1.1E-68 T 11-11-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 7.2E-25 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 7.2E-25 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 7.2E-25 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 S40542_RS20785 c0e37270d99432343110d75e14cd80fd 543 Pfam PF14849 YidC periplasmic domain 72 340 1.2E-76 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal S40542_RS14360 0956dc0bf206bb3e3e24d2256cb2715e 229 Pfam PF11306 Protein of unknown function (DUF3108) 20 211 8.0E-19 T 11-11-2016 IPR021457 Protein of unknown function DUF3108 S40542_RS16725 2216555ae6751078946157f2b9753159 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 283 4.0E-42 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 PRINTS PR00108 Thymidylate synthase family signature 155 170 1.9E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.9E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.9E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.9E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.9E-14 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 SUPERFAMILY SSF55831 1 283 1.44E-89 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 Pfam PF00303 Thymidylate synthase 3 283 1.8E-72 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 31.251 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS16725 2216555ae6751078946157f2b9753159 283 Gene3D G3DSA:3.30.572.10 1 283 1.7E-77 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 TIGRFAM TIGR00571 dam: DNA adenine methylase 6 273 1.7E-91 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 SUPERFAMILY SSF53335 6 273 3.74E-74 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 11 257 6.4E-68 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 Gene3D G3DSA:1.10.1020.10 65 162 4.8E-34 T 11-11-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 PIRSF PIRSF000398 2 279 1.9E-66 T 11-11-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 55 68 7.0E-18 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 36 50 7.0E-18 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 180 192 7.0E-18 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 11 27 7.0E-18 T 11-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 Gene3D G3DSA:3.40.50.150 2 64 3.7E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01390 21852a0d65c924e0ed1fd53386338527 284 Gene3D G3DSA:3.40.50.150 165 273 3.7E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 SUPERFAMILY SSF55136 139 280 1.01E-27 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 Pfam PF06445 GyrI-like small molecule binding domain 139 285 9.5E-28 T 11-11-2016 IPR029442 GyrI-like small molecule binding domain S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 SUPERFAMILY SSF46689 13 58 5.38E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 Gene3D G3DSA:1.10.10.60 66 113 1.6E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 SMART SM00871 137 290 8.0E-26 T 11-11-2016 IPR010499 Bacterial transcription activator, effector binding S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 SMART SM00342 29 112 2.7E-23 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 Pfam PF12833 Helix-turn-helix domain 35 113 1.1E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 Gene3D G3DSA:1.10.10.60 10 65 5.0E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 Gene3D G3DSA:3.20.80.10 139 285 4.9E-39 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain S40542_RS03145 57b34dfeb0ebd69f9e5a0c412150d151 290 SUPERFAMILY SSF46689 65 113 1.7E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS12570 2b713f9a21ecfcb3b62aa7d16c7761dd 547 Pfam PF01565 FAD binding domain 49 181 6.7E-26 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 S40542_RS12570 2b713f9a21ecfcb3b62aa7d16c7761dd 547 SUPERFAMILY SSF56176 5 226 5.14E-38 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 S40542_RS12570 2b713f9a21ecfcb3b62aa7d16c7761dd 547 Gene3D G3DSA:3.30.465.10 104 220 8.5E-12 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 S40542_RS12570 2b713f9a21ecfcb3b62aa7d16c7761dd 547 Gene3D G3DSA:3.30.43.10 8 101 2.1E-9 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 S40542_RS20220 2714790d3b85bb8a416863fc3bcd3235 277 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 15 274 30.942 T 11-11-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 S40542_RS20220 2714790d3b85bb8a416863fc3bcd3235 277 TIGRFAM TIGR00552 nadE: NAD+ synthetase 14 273 2.4E-65 T 11-11-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 S40542_RS20220 2714790d3b85bb8a416863fc3bcd3235 277 Gene3D G3DSA:3.40.50.620 3 275 2.2E-71 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS20220 2714790d3b85bb8a416863fc3bcd3235 277 SUPERFAMILY SSF52402 2 276 1.7E-79 T 11-11-2016 S40542_RS20220 2714790d3b85bb8a416863fc3bcd3235 277 Pfam PF02540 NAD synthase 21 270 9.2E-66 T 11-11-2016 IPR022310 NAD/GMP synthase S40542_RS19190 b7ab13b7e14d901b446b7384930dc095 402 Gene3D G3DSA:3.20.20.450 144 394 1.2E-59 T 11-11-2016 IPR001633 EAL domain S40542_RS19190 b7ab13b7e14d901b446b7384930dc095 402 SUPERFAMILY SSF52172 5 139 1.85E-21 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS19190 b7ab13b7e14d901b446b7384930dc095 402 Gene3D G3DSA:3.40.50.2300 3 127 2.0E-21 T 11-11-2016 S40542_RS19190 b7ab13b7e14d901b446b7384930dc095 402 SUPERFAMILY SSF141868 144 395 1.7E-59 T 11-11-2016 IPR001633 EAL domain S40542_RS19190 b7ab13b7e14d901b446b7384930dc095 402 Pfam PF00072 Response regulator receiver domain 8 92 1.5E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS19190 b7ab13b7e14d901b446b7384930dc095 402 SMART SM00052 139 386 1.0E-50 T 11-11-2016 IPR001633 EAL domain S40542_RS19190 b7ab13b7e14d901b446b7384930dc095 402 Pfam PF00563 EAL domain 146 381 7.0E-54 T 11-11-2016 IPR001633 EAL domain S40542_RS19190 b7ab13b7e14d901b446b7384930dc095 402 SMART SM00448 6 125 1.1E-11 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20790 89a9868a1d1caf79bc99f80b3bfbcecb 87 SMART SM01234 8 75 1.3E-42 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor S40542_RS20790 89a9868a1d1caf79bc99f80b3bfbcecb 87 Pfam PF01809 Haemolytic domain 11 75 4.5E-29 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor S40542_RS20790 89a9868a1d1caf79bc99f80b3bfbcecb 87 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 83 9.9E-34 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor S40542_RS20790 89a9868a1d1caf79bc99f80b3bfbcecb 87 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.552 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor S40542_RS20790 89a9868a1d1caf79bc99f80b3bfbcecb 87 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 1.0E-22 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor S40542_RS16970 2c9d748fdcab6403791bc655e125a901 229 Pfam PF02397 Bacterial sugar transferase 38 223 1.7E-51 T 11-11-2016 IPR003362 Bacterial sugar transferase S40542_RS01710 edf4cdabbce34cc9f027f7cdc04a1308 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 3.6E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS01710 edf4cdabbce34cc9f027f7cdc04a1308 139 Gene3D G3DSA:3.30.700.10 10 70 2.0E-13 T 11-11-2016 S40542_RS01710 edf4cdabbce34cc9f027f7cdc04a1308 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 26 3.6E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS01710 edf4cdabbce34cc9f027f7cdc04a1308 139 SUPERFAMILY SSF54523 10 103 2.28E-17 T 11-11-2016 S40542_RS01710 edf4cdabbce34cc9f027f7cdc04a1308 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS01710 edf4cdabbce34cc9f027f7cdc04a1308 139 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 31 121 5.2E-14 T 11-11-2016 IPR031982 Type IV minor pilin ComP S40542_RS18695 1a173b23475b5aa5b944571125bbf6c7 131 TIGRFAM TIGR00586 mutt: mutator mutT protein 3 128 6.9E-35 T 11-11-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 S40542_RS18695 1a173b23475b5aa5b944571125bbf6c7 131 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.3E-8 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 S40542_RS18695 1a173b23475b5aa5b944571125bbf6c7 131 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.3E-8 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 S40542_RS18695 1a173b23475b5aa5b944571125bbf6c7 131 SUPERFAMILY SSF55811 3 127 1.49E-36 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS18695 1a173b23475b5aa5b944571125bbf6c7 131 Pfam PF00293 NUDIX domain 8 121 7.1E-20 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS18695 1a173b23475b5aa5b944571125bbf6c7 131 Gene3D G3DSA:3.90.79.10 4 128 3.3E-33 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS18695 1a173b23475b5aa5b944571125bbf6c7 131 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 S40542_RS19360 0d4b2f4b252c9ce0abea92f6ae1b2f49 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 3 175 27.348 T 11-11-2016 IPR002786 Non-canonical purine NTP phosphatase S40542_RS19360 0d4b2f4b252c9ce0abea92f6ae1b2f49 177 SUPERFAMILY SSF52972 2 175 6.54E-56 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS19360 0d4b2f4b252c9ce0abea92f6ae1b2f49 177 Pfam PF01931 Protein of unknown function DUF84 8 170 1.4E-55 T 11-11-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 S40542_RS19360 0d4b2f4b252c9ce0abea92f6ae1b2f49 177 Gene3D G3DSA:3.90.950.10 1 175 3.4E-57 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS19360 0d4b2f4b252c9ce0abea92f6ae1b2f49 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 175 3.8E-37 T 11-11-2016 IPR002786 Non-canonical purine NTP phosphatase S40542_RS11610 e56b95432aebe99651559c248fb94304 861 Gene3D G3DSA:1.25.50.10 542 861 1.0E-83 T 11-11-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal S40542_RS11610 e56b95432aebe99651559c248fb94304 861 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 860 0.0 T 11-11-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 SUPERFAMILY SSF55486 202 448 1.46E-72 T 11-11-2016 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 Gene3D G3DSA:1.10.390.10 306 449 6.0E-33 T 11-11-2016 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 SUPERFAMILY SSF63737 2 191 9.15E-44 T 11-11-2016 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 174 189 7.0E-11 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 311 323 7.0E-11 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 7.0E-11 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 256 266 7.0E-11 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 292 307 7.0E-11 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS11610 e56b95432aebe99651559c248fb94304 861 Pfam PF11940 Domain of unknown function (DUF3458) 457 818 1.1E-97 T 11-11-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal S40542_RS11610 e56b95432aebe99651559c248fb94304 861 Pfam PF01433 Peptidase family M1 20 382 2.1E-71 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 S40542_RS09360 801391f7ea98c46deb115592c40fa79c 200 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 200 29.244 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 S40542_RS09360 801391f7ea98c46deb115592c40fa79c 200 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 7 193 2.0E-63 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 S40542_RS09360 801391f7ea98c46deb115592c40fa79c 200 Pfam PF04356 Protein of unknown function (DUF489) 6 193 5.3E-68 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 S40542_RS09360 801391f7ea98c46deb115592c40fa79c 200 SUPERFAMILY SSF101322 5 199 1.83E-65 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 S40542_RS09360 801391f7ea98c46deb115592c40fa79c 200 Gene3D G3DSA:1.10.3890.10 5 199 7.2E-73 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 S40542_RS18520 a883c3007c25514702f5a7031de4703c 382 Pfam PF13524 Glycosyl transferases group 1 297 371 1.1E-7 T 11-11-2016 S40542_RS18520 a883c3007c25514702f5a7031de4703c 382 SUPERFAMILY SSF53756 261 374 6.28E-7 T 11-11-2016 S40542_RS05640 b47aa8bbda9b27de87962e3897eccb15 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 8.6E-76 T 11-11-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS05640 b47aa8bbda9b27de87962e3897eccb15 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 1.5E-46 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS05640 b47aa8bbda9b27de87962e3897eccb15 156 SUPERFAMILY SSF75217 2 154 1.83E-48 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases S40542_RS05640 b47aa8bbda9b27de87962e3897eccb15 156 PIRSF PIRSF004505 1 155 1.8E-40 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS05640 b47aa8bbda9b27de87962e3897eccb15 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.36 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS05640 b47aa8bbda9b27de87962e3897eccb15 156 Gene3D G3DSA:3.40.1280.10 2 155 1.6E-51 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal S40542_RS22990 02874476b4ba46d5ad8c4044da822d9f 105 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS22990 02874476b4ba46d5ad8c4044da822d9f 105 SUPERFAMILY SSF52374 32 94 2.16E-26 T 11-11-2016 S40542_RS22990 02874476b4ba46d5ad8c4044da822d9f 105 Pfam PF00750 tRNA synthetases class I (R) 22 99 4.7E-37 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS22990 02874476b4ba46d5ad8c4044da822d9f 105 PRINTS PR01038 Arginyl-tRNA synthetase signature 36 51 2.7E-19 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS22990 02874476b4ba46d5ad8c4044da822d9f 105 PRINTS PR01038 Arginyl-tRNA synthetase signature 75 88 2.7E-19 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS22990 02874476b4ba46d5ad8c4044da822d9f 105 PRINTS PR01038 Arginyl-tRNA synthetase signature 51 67 2.7E-19 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 S40542_RS22990 02874476b4ba46d5ad8c4044da822d9f 105 Gene3D G3DSA:3.40.50.620 31 97 3.6E-32 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS08670 39d456e246a805618a7ba27bf8de1f1e 482 Gene3D G3DSA:1.25.40.10 282 453 2.6E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS08670 39d456e246a805618a7ba27bf8de1f1e 482 Pfam PF13174 Tetratricopeptide repeat 309 338 0.15 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS08670 39d456e246a805618a7ba27bf8de1f1e 482 Gene3D G3DSA:3.30.2010.10 64 146 1.6E-17 T 11-11-2016 S40542_RS08670 39d456e246a805618a7ba27bf8de1f1e 482 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 482 36.667 T 11-11-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 S40542_RS08670 39d456e246a805618a7ba27bf8de1f1e 482 Pfam PF01435 Peptidase family M48 69 253 1.2E-30 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 S40542_RS08670 39d456e246a805618a7ba27bf8de1f1e 482 SUPERFAMILY SSF48452 284 452 2.15E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS08670 39d456e246a805618a7ba27bf8de1f1e 482 Pfam PF14559 Tetratricopeptide repeat 350 413 4.9E-9 T 11-11-2016 S40542_RS19000 d671c5ae165d0d6fa1eacbd8033615b0 320 Pfam PF01699 Sodium/calcium exchanger protein 4 143 2.4E-24 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 S40542_RS19000 d671c5ae165d0d6fa1eacbd8033615b0 320 Pfam PF01699 Sodium/calcium exchanger protein 177 318 6.9E-28 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 S40542_RS19000 d671c5ae165d0d6fa1eacbd8033615b0 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 315 1.4E-74 T 11-11-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 SUPERFAMILY SSF51735 3 245 2.95E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 Gene3D G3DSA:3.40.50.720 4 246 2.9E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS03910 c23a373b295deb4e93e70d3ce86ed308 291 Pfam PF00106 short chain dehydrogenase 4 191 1.8E-42 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS17265 a1918f3d9e5e24a452c95609fd9f92c5 110 Pfam PF06877 Regulator of ribonuclease activity B 6 104 8.6E-19 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain S40542_RS17265 a1918f3d9e5e24a452c95609fd9f92c5 110 Gene3D G3DSA:3.30.70.970 2 109 3.3E-10 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain S40542_RS17265 a1918f3d9e5e24a452c95609fd9f92c5 110 SUPERFAMILY SSF89946 1 109 3.92E-24 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain S40542_RS05440 b678e90cf5df1dd2585d34231b93e68e 121 SMART SM00448 3 115 7.7E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS05440 b678e90cf5df1dd2585d34231b93e68e 121 SUPERFAMILY SSF52172 3 118 6.12E-29 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS05440 b678e90cf5df1dd2585d34231b93e68e 121 Gene3D G3DSA:3.40.50.2300 2 117 2.0E-29 T 11-11-2016 S40542_RS05440 b678e90cf5df1dd2585d34231b93e68e 121 Pfam PF00072 Response regulator receiver domain 5 114 5.5E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS14455 1a4eb41f70ba17c8d71adfaf3819fb94 1081 SMART SM00316 37 119 2.0E-11 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS14455 1a4eb41f70ba17c8d71adfaf3819fb94 1081 Hamap MF_00970 Ribonuclease E [rne]. 1 1067 35.078 T 11-11-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 S40542_RS14455 1a4eb41f70ba17c8d71adfaf3819fb94 1081 Gene3D G3DSA:2.40.50.140 31 124 3.7E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS14455 1a4eb41f70ba17c8d71adfaf3819fb94 1081 Pfam PF10150 Ribonuclease E/G family 121 390 6.9E-97 T 11-11-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 S40542_RS14455 1a4eb41f70ba17c8d71adfaf3819fb94 1081 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 8.6E-170 T 11-11-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 S40542_RS14455 1a4eb41f70ba17c8d71adfaf3819fb94 1081 Pfam PF00575 S1 RNA binding domain 36 118 2.8E-15 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS14455 1a4eb41f70ba17c8d71adfaf3819fb94 1081 SUPERFAMILY SSF50249 40 123 1.31E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS12080 de43903147c9b7034b7d4e4fc200d463 888 Pfam PF00593 TonB dependent receptor 575 887 9.8E-34 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS12080 de43903147c9b7034b7d4e4fc200d463 888 Gene3D G3DSA:2.170.130.10 33 164 9.6E-32 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS12080 de43903147c9b7034b7d4e4fc200d463 888 Gene3D G3DSA:2.40.170.20 165 227 1.3E-94 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS12080 de43903147c9b7034b7d4e4fc200d463 888 Gene3D G3DSA:2.40.170.20 292 888 1.3E-94 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS12080 de43903147c9b7034b7d4e4fc200d463 888 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 164 9.0E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS12080 de43903147c9b7034b7d4e4fc200d463 888 SUPERFAMILY SSF56935 29 229 2.52E-103 T 11-11-2016 S40542_RS12080 de43903147c9b7034b7d4e4fc200d463 888 SUPERFAMILY SSF56935 393 888 2.52E-103 T 11-11-2016 S40542_RS12080 de43903147c9b7034b7d4e4fc200d463 888 SUPERFAMILY SSF56935 315 363 2.52E-103 T 11-11-2016 S40542_RS02055 a967445f2d4099de0fe0ca3c16566c8b 281 SUPERFAMILY SSF118352 224 281 4.19E-15 T 11-11-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 S40542_RS02055 a967445f2d4099de0fe0ca3c16566c8b 281 PIRSF PIRSF005261 1 281 1.3E-71 T 11-11-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 S40542_RS02055 a967445f2d4099de0fe0ca3c16566c8b 281 SUPERFAMILY SSF64397 4 231 7.19E-71 T 11-11-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 S40542_RS02055 a967445f2d4099de0fe0ca3c16566c8b 281 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 281 28.954 T 11-11-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 S40542_RS02055 a967445f2d4099de0fe0ca3c16566c8b 281 Gene3D G3DSA:1.10.287.480 177 224 5.2E-20 T 11-11-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain S40542_RS02055 a967445f2d4099de0fe0ca3c16566c8b 281 Gene3D G3DSA:3.55.30.10 2 174 1.3E-60 T 11-11-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 S40542_RS02055 a967445f2d4099de0fe0ca3c16566c8b 281 Pfam PF01430 Hsp33 protein 4 272 2.7E-78 T 11-11-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 S40542_RS02055 a967445f2d4099de0fe0ca3c16566c8b 281 Gene3D G3DSA:3.90.1280.10 225 281 5.3E-16 T 11-11-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 S40542_RS05415 4b8e8062e9970ee6852ec941df003f7e 131 Gene3D G3DSA:3.30.428.10 9 129 1.8E-29 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 S40542_RS05415 4b8e8062e9970ee6852ec941df003f7e 131 Pfam PF01230 HIT domain 18 97 2.3E-12 T 11-11-2016 IPR001310 Histidine triad (HIT) protein S40542_RS05415 4b8e8062e9970ee6852ec941df003f7e 131 PIRSF PIRSF000714 2 130 4.2E-48 T 11-11-2016 IPR026026 Histidine triad hydrolase, Hint-type S40542_RS05415 4b8e8062e9970ee6852ec941df003f7e 131 SUPERFAMILY SSF54197 8 129 8.29E-32 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 S40542_RS04385 4d49776da168853a8a200cf65db24d67 1093 Pfam PF04851 Type III restriction enzyme, res subunit 316 485 5.9E-18 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 S40542_RS04385 4d49776da168853a8a200cf65db24d67 1093 Gene3D G3DSA:3.40.50.300 308 500 1.4E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04385 4d49776da168853a8a200cf65db24d67 1093 SMART SM00487 313 522 4.9E-11 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS04385 4d49776da168853a8a200cf65db24d67 1093 SUPERFAMILY SSF52540 640 725 1.46E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04385 4d49776da168853a8a200cf65db24d67 1093 SUPERFAMILY SSF52540 345 394 1.46E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04385 4d49776da168853a8a200cf65db24d67 1093 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 223 3.0E-38 T 11-11-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 S40542_RS04385 4d49776da168853a8a200cf65db24d67 1093 SUPERFAMILY SSF52540 281 540 2.45E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04385 4d49776da168853a8a200cf65db24d67 1093 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 71 739 4.7E-139 T 11-11-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 S40542_RS20065 46c9deb1ec06a0d3b76bc66190067cf1 469 Pfam PF04389 Peptidase family M28 265 453 5.6E-30 T 11-11-2016 IPR007484 Peptidase M28 S40542_RS20065 46c9deb1ec06a0d3b76bc66190067cf1 469 Gene3D G3DSA:3.50.30.30 121 251 9.7E-4 T 11-11-2016 S40542_RS20065 46c9deb1ec06a0d3b76bc66190067cf1 469 Gene3D G3DSA:3.40.630.10 51 103 2.0E-59 T 11-11-2016 S40542_RS20065 46c9deb1ec06a0d3b76bc66190067cf1 469 Gene3D G3DSA:3.40.630.10 264 463 2.0E-59 T 11-11-2016 S40542_RS20065 46c9deb1ec06a0d3b76bc66190067cf1 469 SUPERFAMILY SSF53187 51 91 5.19E-56 T 11-11-2016 S40542_RS20065 46c9deb1ec06a0d3b76bc66190067cf1 469 SUPERFAMILY SSF53187 248 463 5.19E-56 T 11-11-2016 S40542_RS11865 142eb675744c16a5236802b851f81f14 528 Gene3D G3DSA:2.40.50.230 375 421 2.3E-9 T 11-11-2016 IPR006531 Gp5 N-terminal S40542_RS11865 142eb675744c16a5236802b851f81f14 528 SUPERFAMILY SSF69255 349 421 5.75E-11 T 11-11-2016 S40542_RS19880 ffcc61d33aaf98c215c6d1a94063d046 646 SUPERFAMILY SSF51294 465 585 3.66E-15 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain S40542_RS19880 ffcc61d33aaf98c215c6d1a94063d046 646 Gene3D G3DSA:2.170.16.10 465 576 1.1E-11 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain S40542_RS19880 ffcc61d33aaf98c215c6d1a94063d046 646 SMART SM00306 463 561 7.7E-12 T 11-11-2016 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 S40542_RS19880 ffcc61d33aaf98c215c6d1a94063d046 646 Pfam PF01079 Hint module 463 574 1.1E-7 T 11-11-2016 IPR001767 Hedgehog protein, Hint domain GO:0006508|GO:0008233 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 S40542_RS11335 8d713d56a21b2ec414ec307b06252f91 518 Gene3D G3DSA:3.30.750.24 413 497 9.2E-7 T 11-11-2016 IPR002645 STAS domain S40542_RS11335 8d713d56a21b2ec414ec307b06252f91 518 Pfam PF00916 Sulfate permease family 14 374 3.6E-57 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 S40542_RS11335 8d713d56a21b2ec414ec307b06252f91 518 SUPERFAMILY SSF52091 413 496 1.16E-8 T 11-11-2016 IPR002645 STAS domain S40542_RS00705 e133348766a9ed1587a6ae3f595ee46f 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 2.9E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS00705 e133348766a9ed1587a6ae3f595ee46f 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 2.9E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS00705 e133348766a9ed1587a6ae3f595ee46f 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 2.9E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS00705 e133348766a9ed1587a6ae3f595ee46f 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 2.9E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS00705 e133348766a9ed1587a6ae3f595ee46f 223 Gene3D G3DSA:3.40.50.1000 6 194 9.1E-27 T 11-11-2016 IPR023214 HAD-like domain S40542_RS00705 e133348766a9ed1587a6ae3f595ee46f 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 189 2.3E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS00705 e133348766a9ed1587a6ae3f595ee46f 223 Pfam PF00702 haloacid dehalogenase-like hydrolase 7 187 2.7E-12 T 11-11-2016 S40542_RS00705 e133348766a9ed1587a6ae3f595ee46f 223 SUPERFAMILY SSF56784 1 219 3.49E-42 T 11-11-2016 IPR023214 HAD-like domain S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 Gene3D G3DSA:3.90.170.10 267 432 5.3E-64 T 11-11-2016 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 Gene3D G3DSA:1.10.300.10 103 196 1.0E-38 T 11-11-2016 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 Pfam PF00709 Adenylosuccinate synthetase 5 429 4.3E-176 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 218.396 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-11-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 SMART SM00788 4 431 1.2E-299 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 Gene3D G3DSA:3.40.440.10 3 94 3.3E-72 T 11-11-2016 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 Gene3D G3DSA:3.40.440.10 197 266 3.3E-72 T 11-11-2016 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-11-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 436 2.9E-191 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 S40542_RS04115 6df09f356edbe0d9a8f7ffe6613e8bec 438 SUPERFAMILY SSF52540 3 436 1.17E-179 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS20240 aa455b7c69cac1369642be97966fd248 141 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 6 114 1.0E-5 T 11-11-2016 IPR020143 Uncharacterised protein family, RP436 S40542_RS20240 aa455b7c69cac1369642be97966fd248 141 Pfam PF09335 SNARE associated Golgi protein 18 134 2.4E-12 T 11-11-2016 IPR032816 SNARE associated Golgi protein S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 Gene3D G3DSA:3.40.50.300 4 100 1.1E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 Gene3D G3DSA:3.40.50.300 132 281 1.1E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 Pfam PF12848 ABC transporter 224 309 1.3E-21 T 11-11-2016 IPR032781 ABC-transporter extension domain S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 Gene3D G3DSA:3.40.50.300 318 524 6.3E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 Pfam PF00005 ABC transporter 18 184 1.3E-20 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 Pfam PF00005 ABC transporter 340 466 2.8E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 SUPERFAMILY SSF52540 299 521 1.21E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 SUPERFAMILY SSF52540 6 237 1.03E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 SMART SM00382 26 238 4.9E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS14380 1d93c08491d6025f60d1b64701819b3f 530 SMART SM00382 343 511 4.6E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS12445 62c867fe260fa36af1ac4c5144312845 333 Pfam PF12833 Helix-turn-helix domain 252 329 2.6E-12 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS12445 62c867fe260fa36af1ac4c5144312845 333 SMART SM00342 246 328 4.0E-13 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS12445 62c867fe260fa36af1ac4c5144312845 333 SUPERFAMILY SSF46689 284 330 4.35E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS12445 62c867fe260fa36af1ac4c5144312845 333 Gene3D G3DSA:1.10.10.60 285 330 2.0E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS04060 de3b5737225499c41efb0381fa0c7b46 377 Pfam PF00072 Response regulator receiver domain 6 117 6.1E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04060 de3b5737225499c41efb0381fa0c7b46 377 Gene3D G3DSA:3.40.50.2300 4 121 1.3E-38 T 11-11-2016 S40542_RS04060 de3b5737225499c41efb0381fa0c7b46 377 SMART SM00448 4 117 1.6E-37 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS04060 de3b5737225499c41efb0381fa0c7b46 377 SUPERFAMILY SSF52172 5 129 8.82E-37 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS00785 7b4c1693fe7eb0fb660632e02cb46454 156 PIRSF PIRSF016548 1 156 2.9E-57 T 11-11-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 S40542_RS00785 7b4c1693fe7eb0fb660632e02cb46454 156 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 150 2.0E-58 T 11-11-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 S40542_RS06160 636a47301669cc73884a7c5cb3a8138a 142 PIRSF PIRSF039090 1 134 3.8E-45 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 S40542_RS06160 636a47301669cc73884a7c5cb3a8138a 142 Gene3D G3DSA:1.20.120.340 7 130 2.0E-37 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 S40542_RS06160 636a47301669cc73884a7c5cb3a8138a 142 SUPERFAMILY SSF101116 7 127 1.2E-35 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 S40542_RS06160 636a47301669cc73884a7c5cb3a8138a 142 Pfam PF02561 Flagellar protein FliS 8 123 1.3E-34 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 S40542_RS06160 636a47301669cc73884a7c5cb3a8138a 142 TIGRFAM TIGR00208 fliS: flagellar protein FliS 7 122 2.5E-26 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 S40542_RS04990 cc0867f05fed2061bd1a13a1a5dcf48f 399 PIRSF PIRSF016055 1 399 1.2E-196 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 S40542_RS04990 cc0867f05fed2061bd1a13a1a5dcf48f 399 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 399 36.339 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 S40542_RS04990 cc0867f05fed2061bd1a13a1a5dcf48f 399 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 395 3.3E-177 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 S40542_RS04990 cc0867f05fed2061bd1a13a1a5dcf48f 399 Pfam PF03116 NQR2, RnfD, RnfE family 43 392 2.2E-106 T 11-11-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 S40542_RS15330 48fa5e4406ad07af71a10831bd3f4177 382 Gene3D G3DSA:1.10.3860.10 1 380 1.1E-51 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS15330 48fa5e4406ad07af71a10831bd3f4177 382 Pfam PF00375 Sodium:dicarboxylate symporter family 3 376 6.9E-69 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS15330 48fa5e4406ad07af71a10831bd3f4177 382 SUPERFAMILY SSF118215 3 377 2.09E-71 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS15330 48fa5e4406ad07af71a10831bd3f4177 382 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 7.9E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS15330 48fa5e4406ad07af71a10831bd3f4177 382 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 7.9E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS15330 48fa5e4406ad07af71a10831bd3f4177 382 PRINTS PR00173 Glutamate-aspartate symporter signature 266 292 7.9E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS15330 48fa5e4406ad07af71a10831bd3f4177 382 PRINTS PR00173 Glutamate-aspartate symporter signature 331 351 7.9E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS15330 48fa5e4406ad07af71a10831bd3f4177 382 PRINTS PR00173 Glutamate-aspartate symporter signature 67 92 7.9E-11 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 S40542_RS02155 201dba5e1689c5c5aa4702c65f0e9a7f 210 SUPERFAMILY SSF52833 23 208 2.5E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS02155 201dba5e1689c5c5aa4702c65f0e9a7f 210 Gene3D G3DSA:3.40.30.10 20 210 9.3E-50 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS02155 201dba5e1689c5c5aa4702c65f0e9a7f 210 PIRSF PIRSF001488 1 210 5.3E-46 T 11-11-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL S40542_RS02155 201dba5e1689c5c5aa4702c65f0e9a7f 210 Pfam PF01323 DSBA-like thioredoxin domain 42 201 3.6E-11 T 11-11-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 S40542_RS02155 201dba5e1689c5c5aa4702c65f0e9a7f 210 ProSitePatterns PS00194 Thioredoxin family active site. 42 60 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 S40542_RS05615 f59d9cc01b1a109752bdfefbcbf49339 92 SUPERFAMILY SSF117991 7 92 1.23E-26 T 11-11-2016 IPR027471 YbeD-like domain S40542_RS05615 f59d9cc01b1a109752bdfefbcbf49339 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 22.078 T 11-11-2016 IPR007454 Uncharacterised protein family UPF0250 S40542_RS05615 f59d9cc01b1a109752bdfefbcbf49339 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 3.1E-23 T 11-11-2016 IPR007454 Uncharacterised protein family UPF0250 S40542_RS05615 f59d9cc01b1a109752bdfefbcbf49339 92 Gene3D G3DSA:3.30.70.1460 8 92 1.8E-28 T 11-11-2016 IPR027471 YbeD-like domain S40542_RS09205 1b694fa22a52154365e6833bd0f355ee 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 10 186 6.7E-86 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO S40542_RS09205 1b694fa22a52154365e6833bd0f355ee 206 SUPERFAMILY SSF46626 20 202 1.72E-30 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09205 1b694fa22a52154365e6833bd0f355ee 206 Gene3D G3DSA:1.10.760.10 22 202 2.9E-38 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS09205 1b694fa22a52154365e6833bd0f355ee 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 10 187 3.5E-86 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO S40542_RS06275 9caa8030ebe7ce4dc4a19ff00da3ce0d 332 SUPERFAMILY SSF51735 2 322 1.2E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06275 9caa8030ebe7ce4dc4a19ff00da3ce0d 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 309 1.7E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06275 9caa8030ebe7ce4dc4a19ff00da3ce0d 332 Gene3D G3DSA:3.90.25.10 186 319 4.7E-30 T 11-11-2016 S40542_RS06275 9caa8030ebe7ce4dc4a19ff00da3ce0d 332 Gene3D G3DSA:3.40.50.720 2 185 3.3E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS16125 4b2033f452bbe7487b879380052fa29f 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 263 3.4E-13 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS16125 4b2033f452bbe7487b879380052fa29f 362 Gene3D G3DSA:2.40.50.100 164 197 1.0E-8 T 11-11-2016 S40542_RS16125 4b2033f452bbe7487b879380052fa29f 362 Gene3D G3DSA:2.40.50.100 72 89 1.0E-8 T 11-11-2016 S40542_RS16125 4b2033f452bbe7487b879380052fa29f 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 359 6.9E-53 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS16125 4b2033f452bbe7487b879380052fa29f 362 SUPERFAMILY SSF111369 56 276 1.7E-13 T 11-11-2016 S40542_RS12815 ecaaab84de2c7225cb2ad13f2523a5c5 411 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 408 2.2E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12815 ecaaab84de2c7225cb2ad13f2523a5c5 411 SMART SM00387 323 411 3.5E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12815 ecaaab84de2c7225cb2ad13f2523a5c5 411 Pfam PF00512 His Kinase A (phospho-acceptor) domain 221 280 3.7E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12815 ecaaab84de2c7225cb2ad13f2523a5c5 411 Gene3D G3DSA:1.10.287.130 217 278 2.2E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12815 ecaaab84de2c7225cb2ad13f2523a5c5 411 Gene3D G3DSA:3.30.565.10 292 409 1.3E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12815 ecaaab84de2c7225cb2ad13f2523a5c5 411 SUPERFAMILY SSF55874 292 410 2.88E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS12815 ecaaab84de2c7225cb2ad13f2523a5c5 411 SMART SM00388 218 282 7.1E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS12815 ecaaab84de2c7225cb2ad13f2523a5c5 411 SUPERFAMILY SSF47384 202 279 1.96E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06330 ee23b7f52fd9a942bfcdca74d7b75cf7 392 PIRSF PIRSF000390 1 386 3.3E-101 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase S40542_RS06330 ee23b7f52fd9a942bfcdca74d7b75cf7 392 Gene3D G3DSA:3.90.1150.10 260 385 4.5E-33 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS06330 ee23b7f52fd9a942bfcdca74d7b75cf7 392 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 384 1.4E-164 T 11-11-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase S40542_RS06330 ee23b7f52fd9a942bfcdca74d7b75cf7 392 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 380 2.9E-101 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase S40542_RS06330 ee23b7f52fd9a942bfcdca74d7b75cf7 392 SUPERFAMILY SSF53383 2 385 8.36E-108 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS06330 ee23b7f52fd9a942bfcdca74d7b75cf7 392 Gene3D G3DSA:3.40.640.10 1 258 7.9E-77 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS03555 5b93d055bf59d3e2c15742381aaf34ac 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.7E-36 T 11-11-2016 IPR019886 Sodium symporter small subunit, predicted S40542_RS03555 5b93d055bf59d3e2c15742381aaf34ac 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.9E-35 T 11-11-2016 IPR019886 Sodium symporter small subunit, predicted S40542_RS13590 f0bcabe98919a54e65b66bbabd76d996 139 Pfam PF07681 DoxX 18 96 8.8E-18 T 11-11-2016 IPR032808 DoxX family S40542_RS14075 da5888bf6e8d2ff773511052aca991de 1876 Gene3D G3DSA:3.80.10.10 1448 1702 2.2E-17 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS14075 da5888bf6e8d2ff773511052aca991de 1876 SUPERFAMILY SSF52058 1499 1838 2.04E-21 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS14075 da5888bf6e8d2ff773511052aca991de 1876 Gene3D G3DSA:3.80.10.10 1703 1845 2.9E-15 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 Gene3D G3DSA:3.90.800.10 73 171 2.4E-18 T 11-11-2016 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 7 291 38.577 T 11-11-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 2.6E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 2.6E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 171 181 2.6E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 2.6E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 187 195 2.6E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 236 6.0E-41 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 7 263 2.5E-108 T 11-11-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 SUPERFAMILY SSF52374 7 258 2.16E-77 T 11-11-2016 S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 Gene3D G3DSA:3.40.50.620 173 221 1.4E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS03635 94fe3eb96c300daa0cf61a19ca20e3c6 305 Gene3D G3DSA:3.40.50.620 7 72 1.4E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS03110 5c3add7aa1286d9a05b2dadf60606a78 144 SUPERFAMILY SSF55729 8 121 3.38E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS03110 5c3add7aa1286d9a05b2dadf60606a78 144 Pfam PF13673 Acetyltransferase (GNAT) domain 26 126 1.0E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS03110 5c3add7aa1286d9a05b2dadf60606a78 144 Gene3D G3DSA:3.40.630.30 5 124 7.7E-28 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 SUPERFAMILY SSF55021 375 445 5.32E-7 T 11-11-2016 S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 Gene3D G3DSA:3.40.1160.10 103 294 7.3E-60 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 Gene3D G3DSA:3.40.1160.10 2 51 7.3E-60 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 SUPERFAMILY SSF53633 5 292 3.01E-71 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 PIRSF PIRSF000726 3 448 5.4E-117 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 SUPERFAMILY SSF55021 298 391 6.87E-16 T 11-11-2016 S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 445 1.0E-113 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS11470 1864f7d89a8ad71ddc1c5f369e887575 448 Pfam PF00696 Amino acid kinase family 5 277 1.8E-48 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS05130 acf06610b71f99ffb1347a9f38acc7ce 243 SUPERFAMILY SSF52833 104 238 5.07E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS05130 acf06610b71f99ffb1347a9f38acc7ce 243 Gene3D G3DSA:3.40.30.10 108 240 1.4E-45 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS05130 acf06610b71f99ffb1347a9f38acc7ce 243 Gene3D G3DSA:3.10.450.70 33 89 4.7E-22 T 11-11-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal S40542_RS05130 acf06610b71f99ffb1347a9f38acc7ce 243 Pfam PF13098 Thioredoxin-like domain 113 236 1.6E-28 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS05130 acf06610b71f99ffb1347a9f38acc7ce 243 SUPERFAMILY SSF54423 33 87 2.49E-14 T 11-11-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal S40542_RS05130 acf06610b71f99ffb1347a9f38acc7ce 243 ProSitePatterns PS00194 Thioredoxin family active site. 120 138 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 S40542_RS05130 acf06610b71f99ffb1347a9f38acc7ce 243 Pfam PF10411 Disulfide bond isomerase protein N-terminus 34 83 1.3E-15 T 11-11-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal S40542_RS09590 4ea55e41f8360eac45630fceedc3f8bd 140 Gene3D G3DSA:1.10.490.10 3 134 1.5E-40 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 S40542_RS09590 4ea55e41f8360eac45630fceedc3f8bd 140 Pfam PF00042 Globin 7 101 2.9E-15 T 11-11-2016 IPR000971 Globin GO:0019825|GO:0020037 S40542_RS09590 4ea55e41f8360eac45630fceedc3f8bd 140 PRINTS PR00188 Plant globin signature 29 49 2.4E-5 T 11-11-2016 IPR001032 Leghaemoglobin GO:0019825|GO:0020037 S40542_RS09590 4ea55e41f8360eac45630fceedc3f8bd 140 PRINTS PR00188 Plant globin signature 4 21 2.4E-5 T 11-11-2016 IPR001032 Leghaemoglobin GO:0019825|GO:0020037 S40542_RS09590 4ea55e41f8360eac45630fceedc3f8bd 140 PRINTS PR00188 Plant globin signature 107 133 2.4E-5 T 11-11-2016 IPR001032 Leghaemoglobin GO:0019825|GO:0020037 S40542_RS09590 4ea55e41f8360eac45630fceedc3f8bd 140 SUPERFAMILY SSF46458 1 133 1.63E-39 T 11-11-2016 IPR009050 Globin-like S40542_RS18885 abdbbd0aab24f52b76abb38505ae3d4d 121 SUPERFAMILY SSF52980 10 112 1.39E-17 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 S40542_RS18885 abdbbd0aab24f52b76abb38505ae3d4d 121 Gene3D G3DSA:3.40.1350.10 17 121 5.7E-32 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 S40542_RS18885 abdbbd0aab24f52b76abb38505ae3d4d 121 Pfam PF02021 Uncharacterised protein family UPF0102 17 106 9.8E-25 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 S40542_RS18885 abdbbd0aab24f52b76abb38505ae3d4d 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 9 119 20.492 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 S40542_RS18885 abdbbd0aab24f52b76abb38505ae3d4d 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 8 121 1.3E-26 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 Pfam PF00593 TonB dependent receptor 591 889 6.2E-29 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 SUPERFAMILY SSF56935 34 382 9.52E-85 T 11-11-2016 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 SUPERFAMILY SSF56935 522 890 9.52E-85 T 11-11-2016 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 SUPERFAMILY SSF56935 409 469 9.52E-85 T 11-11-2016 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 889 2.1E-182 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 167 3.4E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 Gene3D G3DSA:2.40.170.20 429 486 3.7E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 Gene3D G3DSA:2.40.170.20 535 889 3.7E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 Gene3D G3DSA:2.40.170.20 172 284 3.7E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 Gene3D G3DSA:2.40.170.20 327 384 3.7E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS08715 43c95932291edcf525e55fd2c6ce5e69 890 Gene3D G3DSA:2.170.130.10 63 171 8.1E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS19665 d99baed9aa7729a51c7e932f91f265ba 129 Pfam PF13275 S4 domain 8 69 1.7E-20 T 11-11-2016 S40542_RS19665 d99baed9aa7729a51c7e932f91f265ba 129 SUPERFAMILY SSF55174 3 70 7.98E-16 T 11-11-2016 S40542_RS19665 d99baed9aa7729a51c7e932f91f265ba 129 Gene3D G3DSA:3.10.290.10 2 68 7.9E-22 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS00825 c6b2c1ec76d977b7633a8e25c960449f 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 251 2.3E-22 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS00825 c6b2c1ec76d977b7633a8e25c960449f 270 SUPERFAMILY SSF53850 27 256 2.51E-33 T 11-11-2016 S40542_RS00825 c6b2c1ec76d977b7633a8e25c960449f 270 Gene3D G3DSA:3.40.190.10 33 134 1.3E-16 T 11-11-2016 S40542_RS00825 c6b2c1ec76d977b7633a8e25c960449f 270 Gene3D G3DSA:3.40.190.10 135 188 5.2E-5 T 11-11-2016 S40542_RS00825 c6b2c1ec76d977b7633a8e25c960449f 270 SMART SM00062 26 255 1.5E-5 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS06145 7aea2862b1b6ce55eaabf3c75ca63ca2 319 Gene3D G3DSA:1.20.1330.10 55 170 8.1E-57 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06145 7aea2862b1b6ce55eaabf3c75ca63ca2 319 Gene3D G3DSA:1.20.1330.10 221 275 8.1E-57 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06145 7aea2862b1b6ce55eaabf3c75ca63ca2 319 PRINTS PR00207 Flagellin signature 111 134 3.8E-24 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06145 7aea2862b1b6ce55eaabf3c75ca63ca2 319 PRINTS PR00207 Flagellin signature 37 54 3.8E-24 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06145 7aea2862b1b6ce55eaabf3c75ca63ca2 319 PRINTS PR00207 Flagellin signature 76 95 3.8E-24 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 S40542_RS06145 7aea2862b1b6ce55eaabf3c75ca63ca2 319 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.1E-41 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS06145 7aea2862b1b6ce55eaabf3c75ca63ca2 319 SUPERFAMILY SSF64518 1 318 7.32E-91 T 11-11-2016 S40542_RS06145 7aea2862b1b6ce55eaabf3c75ca63ca2 319 Pfam PF00700 Bacterial flagellin C-terminal helical region 236 318 6.8E-23 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 SUPERFAMILY SSF52540 329 575 3.0E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 577 2.4E-219 T 11-11-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 SUPERFAMILY SSF90123 10 323 3.01E-72 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 Gene3D G3DSA:3.40.50.300 337 569 2.1E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 Pfam PF00664 ABC transporter transmembrane region 31 293 4.3E-48 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 Pfam PF00005 ABC transporter 356 505 2.3E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 SMART SM00382 364 551 3.2E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11535 9ee6cc39478db7ab357b852709d154a5 578 Gene3D G3DSA:1.20.1560.10 10 323 3.1E-68 T 11-11-2016 S40542_RS14115 382cf1d3b6105ac41e1e88a25a780f79 214 Gene3D G3DSA:2.40.160.20 24 214 1.6E-18 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS14115 382cf1d3b6105ac41e1e88a25a780f79 214 SUPERFAMILY SSF56925 22 214 7.59E-20 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS14115 382cf1d3b6105ac41e1e88a25a780f79 214 Pfam PF13505 Outer membrane protein beta-barrel domain 18 214 1.2E-20 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel S40542_RS20225 c89a21842245c92a945af395393b410d 235 SUPERFAMILY SSF51735 5 234 8.99E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20225 c89a21842245c92a945af395393b410d 235 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 233 3.8E-30 T 11-11-2016 S40542_RS20225 c89a21842245c92a945af395393b410d 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.5E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20225 c89a21842245c92a945af395393b410d 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20225 c89a21842245c92a945af395393b410d 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.5E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20225 c89a21842245c92a945af395393b410d 235 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS20225 c89a21842245c92a945af395393b410d 235 Gene3D G3DSA:3.40.50.720 5 234 6.1E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 264 3.8E-80 T 11-11-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 Pfam PF02581 Thiamine monophosphate synthase/TENI 316 486 3.9E-51 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 286 504 19.642 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 SUPERFAMILY SSF51391 307 502 8.89E-59 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 Gene3D G3DSA:3.20.20.70 306 504 4.5E-63 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 SUPERFAMILY SSF53613 3 266 1.71E-71 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 316 496 7.5E-47 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 Gene3D G3DSA:3.40.1190.20 3 265 7.7E-92 T 11-11-2016 IPR029056 Ribokinase-like S40542_RS01635 b8dc1ec3240f2f88fb0da0922987fe5d 506 Pfam PF08543 Phosphomethylpyrimidine kinase 12 262 2.2E-78 T 11-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 S40542_RS11505 802dca2be6319a086bee08bd077121e6 135 SUPERFAMILY SSF82649 2 131 6.28E-39 T 11-11-2016 S40542_RS11505 802dca2be6319a086bee08bd077121e6 135 Pfam PF02657 Fe-S metabolism associated domain 8 130 4.0E-39 T 11-11-2016 IPR003808 Fe-S metabolism associated domain, SufE-like S40542_RS11505 802dca2be6319a086bee08bd077121e6 135 Gene3D G3DSA:3.90.1010.10 3 133 3.5E-43 T 11-11-2016 S40542_RS07425 2efd4912e7ef3243f76f5ed7f2045874 202 SUPERFAMILY SSF52833 1 84 9.06E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS07425 2efd4912e7ef3243f76f5ed7f2045874 202 SUPERFAMILY SSF47616 81 200 1.38E-21 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS07425 2efd4912e7ef3243f76f5ed7f2045874 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 193 6.4E-6 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal S40542_RS07425 2efd4912e7ef3243f76f5ed7f2045874 202 Gene3D G3DSA:3.40.30.10 2 88 2.6E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS07425 2efd4912e7ef3243f76f5ed7f2045874 202 Gene3D G3DSA:1.20.1050.10 89 198 1.3E-19 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS07425 2efd4912e7ef3243f76f5ed7f2045874 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 3.2E-13 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 S40542_RS19720 36bbe9f754828f67e90f3c909d676b41 210 Pfam PF04231 Endonuclease I 27 203 2.0E-27 T 11-11-2016 IPR007346 Endonuclease I GO:0004518 S40542_RS19720 36bbe9f754828f67e90f3c909d676b41 210 SUPERFAMILY SSF54060 25 208 3.3E-56 T 11-11-2016 S40542_RS00240 76e09f5c7b5ebe14cbb3736ac736d1ad 176 Gene3D G3DSA:2.160.10.10 43 130 9.1E-6 T 11-11-2016 S40542_RS07680 22a4db05b81f3b84e7c05001edeaa13e 323 SMART SM01321 12 187 7.7E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07680 22a4db05b81f3b84e7c05001edeaa13e 323 Gene3D G3DSA:3.30.70.1290 135 190 3.1E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07680 22a4db05b81f3b84e7c05001edeaa13e 323 Gene3D G3DSA:3.30.70.1290 16 82 3.1E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07680 22a4db05b81f3b84e7c05001edeaa13e 323 SUPERFAMILY SSF143422 15 81 4.05E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07680 22a4db05b81f3b84e7c05001edeaa13e 323 SUPERFAMILY SSF143422 134 193 4.05E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06920 b84c2f49d1c315185946cdc19005a121 442 Pfam PF00756 Putative esterase 49 202 3.0E-19 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS06920 b84c2f49d1c315185946cdc19005a121 442 Gene3D G3DSA:1.25.40.10 311 435 2.4E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06920 b84c2f49d1c315185946cdc19005a121 442 SUPERFAMILY SSF53474 42 294 2.71E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS06920 b84c2f49d1c315185946cdc19005a121 442 SUPERFAMILY SSF48452 346 433 1.59E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS06920 b84c2f49d1c315185946cdc19005a121 442 Gene3D G3DSA:3.40.50.1820 44 295 1.9E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Pfam PF02563 Polysaccharide biosynthesis/export protein 117 188 5.6E-9 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Pfam PF06251 Capsule biosynthesis GfcC 646 845 1.5E-12 T 11-11-2016 IPR010425 Domain of unknown function DUF1017 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Gene3D G3DSA:3.10.560.10 191 275 2.4E-21 T 11-11-2016 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Gene3D G3DSA:3.10.560.10 757 840 2.3E-12 T 11-11-2016 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Gene3D G3DSA:3.10.560.10 732 756 7.4E-14 T 11-11-2016 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Gene3D G3DSA:3.10.560.10 631 678 7.4E-14 T 11-11-2016 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Gene3D G3DSA:3.10.560.10 541 622 4.8E-12 T 11-11-2016 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Gene3D G3DSA:3.10.560.10 363 445 2.9E-9 T 11-11-2016 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Gene3D G3DSA:3.10.560.10 278 340 3.5E-11 T 11-11-2016 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Pfam PF10531 SLBB domain 546 597 6.2E-7 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Pfam PF10531 SLBB domain 365 390 0.007 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Pfam PF10531 SLBB domain 279 324 5.1E-8 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Pfam PF10531 SLBB domain 197 245 3.1E-5 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS18660 54ff1643523d453763883e80ca87bf74 872 Gene3D G3DSA:3.30.1950.10 125 190 2.8E-7 T 11-11-2016 S40542_RS03325 0aa4ec74905de43549fe364bd973b71c 291 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 1 269 1.0E-113 T 11-11-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 S40542_RS03325 0aa4ec74905de43549fe364bd973b71c 291 Pfam PF00483 Nucleotidyl transferase 2 270 1.5E-27 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 S40542_RS03325 0aa4ec74905de43549fe364bd973b71c 291 Gene3D G3DSA:3.90.550.10 1 277 7.4E-70 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS03325 0aa4ec74905de43549fe364bd973b71c 291 SUPERFAMILY SSF53448 1 278 6.31E-62 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS01265 c4618fd2e8a8a20a6da69dd97cdb6adf 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 127 254 5.8E-8 T 11-11-2016 IPR000160 GGDEF domain S40542_RS01265 c4618fd2e8a8a20a6da69dd97cdb6adf 564 Gene3D G3DSA:3.30.70.270 126 276 3.9E-15 T 11-11-2016 S40542_RS01265 c4618fd2e8a8a20a6da69dd97cdb6adf 564 SMART SM00052 295 540 8.2E-34 T 11-11-2016 IPR001633 EAL domain S40542_RS01265 c4618fd2e8a8a20a6da69dd97cdb6adf 564 SUPERFAMILY SSF55073 126 274 1.49E-11 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS01265 c4618fd2e8a8a20a6da69dd97cdb6adf 564 Pfam PF00563 EAL domain 309 535 7.5E-49 T 11-11-2016 IPR001633 EAL domain S40542_RS01265 c4618fd2e8a8a20a6da69dd97cdb6adf 564 Gene3D G3DSA:3.20.20.450 309 548 4.4E-54 T 11-11-2016 IPR001633 EAL domain S40542_RS01265 c4618fd2e8a8a20a6da69dd97cdb6adf 564 SUPERFAMILY SSF141868 302 550 4.05E-52 T 11-11-2016 IPR001633 EAL domain S40542_RS01265 c4618fd2e8a8a20a6da69dd97cdb6adf 564 SMART SM00267 109 288 0.0022 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10280 ca19c4e239567082d97f9d6ccf53ab0d 199 Gene3D G3DSA:1.20.1540.10 15 189 1.0E-19 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 S40542_RS10280 ca19c4e239567082d97f9d6ccf53ab0d 199 SUPERFAMILY SSF144091 14 192 1.44E-29 T 11-11-2016 S40542_RS10280 ca19c4e239567082d97f9d6ccf53ab0d 199 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 33 184 1.8E-49 T 11-11-2016 IPR023826 Rhomboid-like serine protease, proteobacteria S40542_RS10280 ca19c4e239567082d97f9d6ccf53ab0d 199 Pfam PF01694 Rhomboid family 43 191 6.2E-14 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 S40542_RS02260 449d6fb7c6498bf8562e56507dbb00f4 334 Gene3D G3DSA:3.40.50.2000 15 152 9.2E-23 T 11-11-2016 S40542_RS02260 449d6fb7c6498bf8562e56507dbb00f4 334 Gene3D G3DSA:3.40.50.2000 170 333 4.7E-26 T 11-11-2016 S40542_RS02260 449d6fb7c6498bf8562e56507dbb00f4 334 SUPERFAMILY SSF53756 15 333 8.97E-56 T 11-11-2016 S40542_RS02260 449d6fb7c6498bf8562e56507dbb00f4 334 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 292 1.8E-27 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 SUPERFAMILY SSF48029 14 129 1.15E-21 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 Gene3D G3DSA:1.10.220.30 208 345 6.4E-43 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 Pfam PF14842 FliG N-terminal domain 17 118 8.4E-29 T 11-11-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 Pfam PF14841 FliG middle domain 129 200 3.1E-26 T 11-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 SUPERFAMILY SSF48029 127 338 8.76E-69 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 Gene3D G3DSA:1.10.220.30 118 203 2.5E-31 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 Gene3D G3DSA:1.10.220.30 19 86 9.4E-17 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 47 73 3.6E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 18 34 3.6E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 127 150 3.6E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 239 259 3.6E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 285 311 3.6E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 208 233 3.6E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 261 281 3.6E-57 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 14 344 7.3E-95 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 PIRSF PIRSF003161 12 346 1.2E-114 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 S40542_RS06375 25ac1b1221dfe9eafe121784d0e0d0ba 346 Pfam PF01706 FliG C-terminal domain 231 337 2.3E-40 T 11-11-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal S40542_RS11515 3eec190bb021ba720d8c3654b4f02ca5 221 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 4 203 5.9E-69 T 11-11-2016 IPR006508 Pseudouridine synthase, RluA-like S40542_RS11515 3eec190bb021ba720d8c3654b4f02ca5 221 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS11515 3eec190bb021ba720d8c3654b4f02ca5 221 Pfam PF00849 RNA pseudouridylate synthase 12 153 1.5E-24 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS11515 3eec190bb021ba720d8c3654b4f02ca5 221 SUPERFAMILY SSF55120 4 194 4.64E-46 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17030 498067c9bbd4a9c16d63a6ad2cfc6470 199 Pfam PF06930 Protein of unknown function (DUF1282) 9 180 6.8E-45 T 11-11-2016 IPR009698 Protein of unknown function DUF1282 S40542_RS00905 4c69ccee6a44fd34eb8e3daf18daf002 255 SUPERFAMILY SSF52540 37 243 4.72E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00905 4c69ccee6a44fd34eb8e3daf18daf002 255 Pfam PF00005 ABC transporter 41 184 4.1E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS00905 4c69ccee6a44fd34eb8e3daf18daf002 255 Gene3D G3DSA:3.40.50.300 3 242 2.2E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00905 4c69ccee6a44fd34eb8e3daf18daf002 255 SMART SM00382 49 242 3.5E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS00840 aaf74ceb332437bdb0e50ae73fcd0dec 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 2.5E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS00840 aaf74ceb332437bdb0e50ae73fcd0dec 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 2.5E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS00840 aaf74ceb332437bdb0e50ae73fcd0dec 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 2.5E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS00840 aaf74ceb332437bdb0e50ae73fcd0dec 109 SUPERFAMILY SSF46785 13 101 6.28E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS00840 aaf74ceb332437bdb0e50ae73fcd0dec 109 Gene3D G3DSA:1.10.10.10 7 101 6.1E-35 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS00840 aaf74ceb332437bdb0e50ae73fcd0dec 109 SMART SM00418 19 97 2.7E-24 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS00840 aaf74ceb332437bdb0e50ae73fcd0dec 109 Pfam PF01022 Bacterial regulatory protein, arsR family 27 71 4.8E-13 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 SUPERFAMILY SSF82714 182 265 1.15E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 Gene3D G3DSA:1.10.3850.10 793 1008 7.8E-56 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 SUPERFAMILY SSF82693 268 324 1.05E-22 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 SUPERFAMILY SSF82693 138 181 1.05E-22 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 SUPERFAMILY SSF82866 788 1009 1.09E-43 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 Gene3D G3DSA:3.30.2090.10 181 267 1.1E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 SUPERFAMILY SSF82866 291 489 6.8E-50 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 Gene3D G3DSA:3.30.70.1430 555 647 2.8E-11 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1005 5.0E-297 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 SUPERFAMILY SSF82693 40 132 5.75E-26 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 SUPERFAMILY SSF82714 701 785 1.31E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 Gene3D G3DSA:3.30.2090.10 701 786 3.3E-19 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 Gene3D G3DSA:3.30.70.1430 40 139 3.3E-31 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 Gene3D G3DSA:1.20.1640.10 285 495 6.5E-61 T 11-11-2016 S40542_RS18295 32ff514118b510e652594a85d7d58b10 1036 SUPERFAMILY SSF82693 553 653 2.04E-16 T 11-11-2016 S40542_RS01770 a4317e16f00d569d12f8503f11668388 144 Gene3D G3DSA:1.10.10.10 9 80 6.4E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01770 a4317e16f00d569d12f8503f11668388 144 SUPERFAMILY SSF46785 9 140 2.0E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS01770 a4317e16f00d569d12f8503f11668388 144 Pfam PF01475 Ferric uptake regulator family 17 135 3.5E-16 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 S40542_RS06325 4d1480a7b567adace0f8c6a38375d471 377 Gene3D G3DSA:3.40.50.720 2 153 8.7E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06325 4d1480a7b567adace0f8c6a38375d471 377 SUPERFAMILY SSF55347 140 316 4.41E-25 T 11-11-2016 S40542_RS06325 4d1480a7b567adace0f8c6a38375d471 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 132 2.7E-16 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 S40542_RS06325 4d1480a7b567adace0f8c6a38375d471 377 SUPERFAMILY SSF51735 3 163 6.34E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06325 4d1480a7b567adace0f8c6a38375d471 377 Gene3D G3DSA:3.30.360.10 325 376 3.1E-22 T 11-11-2016 S40542_RS06325 4d1480a7b567adace0f8c6a38375d471 377 Gene3D G3DSA:3.30.360.10 154 275 3.1E-22 T 11-11-2016 S40542_RS02880 234af1a5c246db356a1c5a267b40d849 381 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 375 2.0E-91 T 11-11-2016 IPR014047 Chromate transporter, long chain S40542_RS02880 234af1a5c246db356a1c5a267b40d849 381 PIRSF PIRSF004810 1 381 3.0E-115 T 11-11-2016 IPR014047 Chromate transporter, long chain S40542_RS02880 234af1a5c246db356a1c5a267b40d849 381 Pfam PF02417 Chromate transporter 3 168 1.9E-32 T 11-11-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 S40542_RS02880 234af1a5c246db356a1c5a267b40d849 381 Pfam PF02417 Chromate transporter 212 375 1.1E-34 T 11-11-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 S40542_RS11325 576d1d65e77555db1ea69254e6f19f24 298 Gene3D G3DSA:3.40.190.10 95 193 5.3E-13 T 11-11-2016 S40542_RS11325 576d1d65e77555db1ea69254e6f19f24 298 SUPERFAMILY SSF53850 91 295 7.19E-27 T 11-11-2016 S40542_RS11325 576d1d65e77555db1ea69254e6f19f24 298 Gene3D G3DSA:1.10.10.10 3 71 1.0E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11325 576d1d65e77555db1ea69254e6f19f24 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.5E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS11325 576d1d65e77555db1ea69254e6f19f24 298 SUPERFAMILY SSF46785 4 89 2.15E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11325 576d1d65e77555db1ea69254e6f19f24 298 Pfam PF03466 LysR substrate binding domain 90 291 1.5E-19 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS14565 ee5b5966b3eea8a97fd6037e50b7fff7 1094 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 794 1.3E-259 T 11-11-2016 S40542_RS14565 ee5b5966b3eea8a97fd6037e50b7fff7 1094 SUPERFAMILY SSF52540 1 339 3.35E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14565 ee5b5966b3eea8a97fd6037e50b7fff7 1094 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1032 1.5E-288 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 S40542_RS14565 ee5b5966b3eea8a97fd6037e50b7fff7 1094 Gene3D G3DSA:1.10.10.160 87 190 1.3E-25 T 11-11-2016 IPR013986 DExx box DNA helicase domain S40542_RS14565 ee5b5966b3eea8a97fd6037e50b7fff7 1094 PIRSF PIRSF000980 1 1070 2.2E-303 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 S40542_RS14565 ee5b5966b3eea8a97fd6037e50b7fff7 1094 SUPERFAMILY SSF52980 807 1085 6.97E-60 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 S40542_RS14565 ee5b5966b3eea8a97fd6037e50b7fff7 1094 SUPERFAMILY SSF52540 358 795 4.12E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14565 ee5b5966b3eea8a97fd6037e50b7fff7 1094 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1089 18.855 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 S40542_RS15400 fc84dd55d74d2e86ccf046c8507415d0 728 Gene3D G3DSA:2.170.130.10 32 164 3.6E-34 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS15400 fc84dd55d74d2e86ccf046c8507415d0 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 1.0E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS15400 fc84dd55d74d2e86ccf046c8507415d0 728 Gene3D G3DSA:2.40.170.20 165 700 1.4E-70 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS15400 fc84dd55d74d2e86ccf046c8507415d0 728 SUPERFAMILY SSF56935 35 704 4.47E-109 T 11-11-2016 S40542_RS22915 19f8f08fd1191e3afaf44b3a188a5667 336 SUPERFAMILY SSF63411 3 59 4.37E-9 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS22915 19f8f08fd1191e3afaf44b3a188a5667 336 Gene3D G3DSA:3.30.830.10 88 282 5.8E-26 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS22915 19f8f08fd1191e3afaf44b3a188a5667 336 SUPERFAMILY SSF63411 86 274 2.44E-26 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS22915 19f8f08fd1191e3afaf44b3a188a5667 336 Gene3D G3DSA:3.30.830.10 3 47 1.1E-4 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS00350 b599e34b966d43bb8f8297e2ee0f576d 283 Gene3D G3DSA:2.70.98.10 5 281 3.8E-78 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 S40542_RS00350 b599e34b966d43bb8f8297e2ee0f576d 283 PIRSF PIRSF016020 1 283 7.3E-58 T 11-11-2016 IPR025532 Glucose-6-phosphate 1-epimerase S40542_RS00350 b599e34b966d43bb8f8297e2ee0f576d 283 SUPERFAMILY SSF74650 14 280 8.16E-61 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 S40542_RS00350 b599e34b966d43bb8f8297e2ee0f576d 283 Pfam PF01263 Aldose 1-epimerase 26 280 5.3E-39 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 S40542_RS18605 0f5ee00864cd6384ffcca01529547f11 470 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 4.1E-75 T 11-11-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 S40542_RS18605 0f5ee00864cd6384ffcca01529547f11 470 Pfam PF00483 Nucleotidyl transferase 4 284 3.2E-71 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 S40542_RS18605 0f5ee00864cd6384ffcca01529547f11 470 SUPERFAMILY SSF51182 182 466 1.53E-88 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS18605 0f5ee00864cd6384ffcca01529547f11 470 Gene3D G3DSA:3.90.550.10 2 268 8.2E-100 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18605 0f5ee00864cd6384ffcca01529547f11 470 Gene3D G3DSA:2.60.120.10 354 466 2.9E-47 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS18605 0f5ee00864cd6384ffcca01529547f11 470 SUPERFAMILY SSF53448 1 279 1.26E-74 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18605 0f5ee00864cd6384ffcca01529547f11 470 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 466 2.6E-230 T 11-11-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 SMART SM00283 270 531 1.2E-61 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 178 198 5.0E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 5.0E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 5.0E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 Gene3D G3DSA:1.10.287.950 284 502 3.7E-54 T 11-11-2016 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 SMART SM00304 201 255 1.3E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 SUPERFAMILY SSF58104 223 530 4.58E-71 T 11-11-2016 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 Pfam PF00672 HAMP domain 183 251 3.3E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00295 b9d469abf81ad394d792e7ed3f8c426b 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 529 3.0E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS18010 1e303650a7a1c76188a95d65a1621d7d 148 Pfam PF09424 Yqey-like protein 6 146 1.7E-52 T 11-11-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial S40542_RS18010 1e303650a7a1c76188a95d65a1621d7d 148 Gene3D G3DSA:1.10.10.410 91 147 6.3E-23 T 11-11-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal S40542_RS18010 1e303650a7a1c76188a95d65a1621d7d 148 Gene3D G3DSA:1.10.1510.10 1 90 3.2E-30 T 11-11-2016 S40542_RS18010 1e303650a7a1c76188a95d65a1621d7d 148 SUPERFAMILY SSF89095 1 147 7.32E-43 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 S40542_RS04630 ba97f3e1744429201314f1d922e15fdf 254 Pfam PF00149 Calcineurin-like phosphoesterase 15 198 2.9E-12 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 S40542_RS04630 ba97f3e1744429201314f1d922e15fdf 254 SUPERFAMILY SSF56300 15 252 1.41E-36 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS04630 ba97f3e1744429201314f1d922e15fdf 254 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 252 30.523 T 11-11-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 S40542_RS04630 ba97f3e1744429201314f1d922e15fdf 254 Gene3D G3DSA:3.60.21.10 13 99 3.7E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS04630 ba97f3e1744429201314f1d922e15fdf 254 Gene3D G3DSA:3.60.21.10 151 247 9.8E-11 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 194 1.2E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 SUPERFAMILY SSF56784 6 227 6.04E-63 T 11-11-2016 IPR023214 HAD-like domain S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.293 T 11-11-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 Gene3D G3DSA:1.10.150.240 21 86 8.4E-23 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 194 1.9E-37 T 11-11-2016 IPR023214 HAD-like domain S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 222 7.6E-63 T 11-11-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 188 5.5E-13 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 94 193 4.8E-13 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 S40542_RS12885 f9abf927c84f31842d952e29de07ccff 232 Gene3D G3DSA:3.40.50.1000 87 224 3.1E-46 T 11-11-2016 IPR023214 HAD-like domain S40542_RS00995 524c1fef1dd004711fb0c17b6ebaca13 133 Gene3D G3DSA:3.90.1030.10 1 117 1.4E-50 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00995 524c1fef1dd004711fb0c17b6ebaca13 133 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.5E-49 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00995 524c1fef1dd004711fb0c17b6ebaca13 133 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00995 524c1fef1dd004711fb0c17b6ebaca13 133 Pfam PF01196 Ribosomal protein L17 20 115 2.5E-33 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00995 524c1fef1dd004711fb0c17b6ebaca13 133 SUPERFAMILY SSF64263 1 119 1.44E-51 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS00995 524c1fef1dd004711fb0c17b6ebaca13 133 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.772 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS22615 c065654070aec32276ea1820db3a5570 269 Gene3D G3DSA:1.10.287.950 24 228 2.8E-65 T 11-11-2016 S40542_RS22615 c065654070aec32276ea1820db3a5570 269 SUPERFAMILY SSF58104 14 257 1.44E-72 T 11-11-2016 S40542_RS22615 c065654070aec32276ea1820db3a5570 269 SMART SM00283 9 256 1.8E-95 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS22615 c065654070aec32276ea1820db3a5570 269 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 68 255 6.5E-63 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS22615 c065654070aec32276ea1820db3a5570 269 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 30 59 5.8E-56 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS22615 c065654070aec32276ea1820db3a5570 269 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 107 134 5.8E-56 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS22615 c065654070aec32276ea1820db3a5570 269 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 136 165 5.8E-56 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS22615 c065654070aec32276ea1820db3a5570 269 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 213 5.8E-56 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS11780 67c580b4b2c3f2f90523193ddcea7a16 175 Gene3D G3DSA:3.40.50.360 1 168 4.9E-63 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS11780 67c580b4b2c3f2f90523193ddcea7a16 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 3.2E-71 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 S40542_RS11780 67c580b4b2c3f2f90523193ddcea7a16 175 Pfam PF00258 Flavodoxin 6 160 2.1E-32 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 S40542_RS11780 67c580b4b2c3f2f90523193ddcea7a16 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 S40542_RS11780 67c580b4b2c3f2f90523193ddcea7a16 175 SUPERFAMILY SSF52218 4 171 6.9E-54 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS11780 67c580b4b2c3f2f90523193ddcea7a16 175 PIRSF PIRSF038996 1 172 3.3E-66 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 S40542_RS04105 fb0ac5d99e38e32d1c9dfaba39d09538 387 SUPERFAMILY SSF117892 107 239 4.05E-21 T 11-11-2016 IPR001107 Band 7 domain S40542_RS04105 fb0ac5d99e38e32d1c9dfaba39d09538 387 Pfam PF12221 Bacterial membrane protein N terminal 1 47 3.8E-17 T 11-11-2016 IPR020980 Menbrane protein HflK, N-terminal S40542_RS04105 fb0ac5d99e38e32d1c9dfaba39d09538 387 Pfam PF01145 SPFH domain / Band 7 family 78 250 1.4E-25 T 11-11-2016 IPR001107 Band 7 domain S40542_RS04105 fb0ac5d99e38e32d1c9dfaba39d09538 387 TIGRFAM TIGR01933 hflK: HflK protein 76 336 3.7E-110 T 11-11-2016 IPR010201 HflK GO:0016021 S40542_RS04105 fb0ac5d99e38e32d1c9dfaba39d09538 387 PRINTS PR00721 Stomatin signature 128 149 1.7E-5 T 11-11-2016 IPR001972 Stomatin family GO:0016020 S40542_RS04105 fb0ac5d99e38e32d1c9dfaba39d09538 387 PRINTS PR00721 Stomatin signature 210 228 1.7E-5 T 11-11-2016 IPR001972 Stomatin family GO:0016020 S40542_RS04105 fb0ac5d99e38e32d1c9dfaba39d09538 387 PRINTS PR00721 Stomatin signature 81 103 1.7E-5 T 11-11-2016 IPR001972 Stomatin family GO:0016020 S40542_RS04105 fb0ac5d99e38e32d1c9dfaba39d09538 387 SMART SM00244 74 234 4.5E-42 T 11-11-2016 IPR001107 Band 7 domain S40542_RS19585 83a18da32dfec1e3dbddbda1a1f869f2 299 Gene3D G3DSA:3.40.50.620 3 207 2.5E-64 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS19585 83a18da32dfec1e3dbddbda1a1f869f2 299 Gene3D G3DSA:3.40.50.620 241 250 2.5E-64 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS19585 83a18da32dfec1e3dbddbda1a1f869f2 299 PIRSF PIRSF002936 1 299 3.5E-156 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 S40542_RS19585 83a18da32dfec1e3dbddbda1a1f869f2 299 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 1 299 57.209 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 S40542_RS19585 83a18da32dfec1e3dbddbda1a1f869f2 299 SUPERFAMILY SSF52402 3 206 3.96E-75 T 11-11-2016 S40542_RS19585 83a18da32dfec1e3dbddbda1a1f869f2 299 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 6 299 1.7E-160 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 S40542_RS19585 83a18da32dfec1e3dbddbda1a1f869f2 299 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 26 254 1.6E-64 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 S40542_RS08140 8e6e1ba90d37a6b1c738a0c3a677dbe3 236 Pfam PF00117 Glutamine amidotransferase class-I 30 225 2.4E-12 T 11-11-2016 IPR017926 Glutamine amidotransferase S40542_RS08140 8e6e1ba90d37a6b1c738a0c3a677dbe3 236 SUPERFAMILY SSF52317 2 230 1.22E-38 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS08140 8e6e1ba90d37a6b1c738a0c3a677dbe3 236 Gene3D G3DSA:3.40.50.880 2 231 1.5E-39 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS15170 9be2f6268fa37e1b3e6841b914cbef20 236 SUPERFAMILY SSF53681 5 114 2.78E-22 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS15170 9be2f6268fa37e1b3e6841b914cbef20 236 TIGRFAM TIGR00035 asp_race: aspartate racemase 4 230 8.1E-42 T 11-11-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 S40542_RS15170 9be2f6268fa37e1b3e6841b914cbef20 236 SUPERFAMILY SSF53681 106 208 3.6E-19 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS15170 9be2f6268fa37e1b3e6841b914cbef20 236 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 220 7.9E-41 T 11-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS15170 9be2f6268fa37e1b3e6841b914cbef20 236 Gene3D G3DSA:3.40.50.1860 4 115 2.7E-24 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS15170 9be2f6268fa37e1b3e6841b914cbef20 236 Gene3D G3DSA:3.40.50.1860 116 210 7.1E-19 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS15170 9be2f6268fa37e1b3e6841b914cbef20 236 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 196 206 - T 11-11-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Gene3D G3DSA:2.120.10.60 26 302 1.2E-59 T 11-11-2016 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Gene3D G3DSA:2.130.10.10 324 662 1.3E-55 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 SMART SM00228 758 838 0.0047 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Gene3D G3DSA:2.30.42.10 757 854 2.2E-24 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 SMART SM00245 843 1033 6.6E-8 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Pfam PF14685 Tricorn protease PDZ domain 758 843 1.0E-20 T 11-11-2016 IPR029414 Tricorn protease, PDZ domain S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Pfam PF03572 Peptidase family S41 877 1032 2.3E-19 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 SUPERFAMILY SSF52096 676 755 4.47E-60 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 SUPERFAMILY SSF52096 850 1059 4.47E-60 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 PIRSF PIRSF036421 21 1066 6.7E-223 T 11-11-2016 IPR012393 Tricorn protease GO:0008236 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 SUPERFAMILY SSF50156 758 847 2.38E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Gene3D G3DSA:3.30.750.44 676 746 2.3E-25 T 11-11-2016 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Gene3D G3DSA:3.90.226.10 859 1064 1.2E-35 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 SUPERFAMILY SSF69304 35 302 3.92E-37 T 11-11-2016 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Pfam PF07676 WD40-like Beta Propeller Repeat 497 516 2.7E-5 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Pfam PF07676 WD40-like Beta Propeller Repeat 62 97 2.5E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Pfam PF07676 WD40-like Beta Propeller Repeat 356 388 0.0043 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 SUPERFAMILY SSF69304 323 523 1.83E-30 T 11-11-2016 S40542_RS17825 be84a820121c1e9c2e95f7b0cc6e0a8e 1077 Pfam PF14684 Tricorn protease C1 domain 680 746 1.8E-23 T 11-11-2016 IPR028204 Tricorn protease C1 domain S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 Gene3D G3DSA:3.30.1490.20 125 200 7.3E-26 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 Gene3D G3DSA:3.40.50.20 8 122 7.0E-37 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 SUPERFAMILY SSF52440 6 114 1.05E-31 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 SUPERFAMILY SSF51246 321 392 6.75E-17 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 SUPERFAMILY SSF56059 115 317 2.3E-57 T 11-11-2016 S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 10 394 51.365 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 Gene3D G3DSA:3.30.470.20 201 389 3.4E-71 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 Pfam PF02222 ATP-grasp domain 125 297 3.7E-55 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type S40542_RS00885 b66633a50c930f0623a3d3046b17d7a1 395 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 16 392 2.0E-183 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 S40542_RS01160 242da03163c3b3db5c50e1ed15fa8f20 285 Gene3D G3DSA:3.10.129.10 5 115 8.1E-47 T 11-11-2016 IPR029069 HotDog domain S40542_RS01160 242da03163c3b3db5c50e1ed15fa8f20 285 Pfam PF13622 Thioesterase-like superfamily 33 282 4.2E-61 T 11-11-2016 S40542_RS01160 242da03163c3b3db5c50e1ed15fa8f20 285 SUPERFAMILY SSF54637 116 283 1.31E-60 T 11-11-2016 IPR029069 HotDog domain S40542_RS01160 242da03163c3b3db5c50e1ed15fa8f20 285 Gene3D G3DSA:3.10.129.10 124 284 2.3E-59 T 11-11-2016 IPR029069 HotDog domain S40542_RS01160 242da03163c3b3db5c50e1ed15fa8f20 285 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.4E-99 T 11-11-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-75105 S40542_RS01160 242da03163c3b3db5c50e1ed15fa8f20 285 SUPERFAMILY SSF54637 4 114 3.43E-41 T 11-11-2016 IPR029069 HotDog domain S40542_RS17340 a385d4e85e10e0c034dc34f881f0ca5f 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 419 1.0E-68 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS17340 a385d4e85e10e0c034dc34f881f0ca5f 459 PIRSF PIRSF006603 3 456 1.3E-120 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS17340 a385d4e85e10e0c034dc34f881f0ca5f 459 Pfam PF01554 MatE 28 188 1.0E-32 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS17340 a385d4e85e10e0c034dc34f881f0ca5f 459 Pfam PF01554 MatE 252 413 3.0E-22 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS04770 3cbf228f7c83315a6404e6d457fa9cc1 179 Gene3D G3DSA:3.40.1410.10 16 173 2.0E-33 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain S40542_RS04770 3cbf228f7c83315a6404e6d457fa9cc1 179 Pfam PF04345 Chorismate lyase 20 176 3.7E-24 T 11-11-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 S40542_RS04770 3cbf228f7c83315a6404e6d457fa9cc1 179 SUPERFAMILY SSF64288 9 173 6.28E-32 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain S40542_RS20170 e321a6eaaf8413599ff2f6cc61a86160 375 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 262 372 8.1E-17 T 11-11-2016 IPR011969 Clan AA aspartic peptidase, C-terminal S40542_RS20170 e321a6eaaf8413599ff2f6cc61a86160 375 SUPERFAMILY SSF50630 258 364 5.32E-14 T 11-11-2016 IPR021109 Aspartic peptidase domain S40542_RS20170 e321a6eaaf8413599ff2f6cc61a86160 375 Gene3D G3DSA:2.40.70.10 266 332 7.7E-4 T 11-11-2016 IPR021109 Aspartic peptidase domain S40542_RS20170 e321a6eaaf8413599ff2f6cc61a86160 375 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 278 289 - T 11-11-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 S40542_RS20170 e321a6eaaf8413599ff2f6cc61a86160 375 Gene3D G3DSA:1.25.40.10 52 229 4.7E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20170 e321a6eaaf8413599ff2f6cc61a86160 375 SUPERFAMILY SSF48452 59 169 2.4E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS20170 e321a6eaaf8413599ff2f6cc61a86160 375 Pfam PF13975 gag-polyprotein putative aspartyl protease 268 358 6.2E-15 T 11-11-2016 S40542_RS19200 a38f37398b344d3bd5125acb8262c947 817 SUPERFAMILY SSF53474 550 805 3.88E-60 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS19200 a38f37398b344d3bd5125acb8262c947 817 SUPERFAMILY SSF82171 178 536 5.23E-18 T 11-11-2016 S40542_RS19200 a38f37398b344d3bd5125acb8262c947 817 Pfam PF00326 Prolyl oligopeptidase family 601 806 3.6E-43 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS19200 a38f37398b344d3bd5125acb8262c947 817 Gene3D G3DSA:2.130.10.10 178 511 2.8E-12 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS19200 a38f37398b344d3bd5125acb8262c947 817 Gene3D G3DSA:3.40.50.1820 549 805 4.7E-63 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS18415 0ec968d27aee95a8807930ffb305e845 121 SUPERFAMILY SSF52833 40 116 7.6E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS18415 0ec968d27aee95a8807930ffb305e845 121 Gene3D G3DSA:3.40.30.10 48 117 9.6E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS18415 0ec968d27aee95a8807930ffb305e845 121 Pfam PF13417 Glutathione S-transferase, N-terminal domain 43 116 1.3E-11 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 S40542_RS02060 39df4fc8d4b497646834e7b0c5e24146 136 PIRSF PIRSF016821 12 136 3.1E-41 T 11-11-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 S40542_RS02060 39df4fc8d4b497646834e7b0c5e24146 136 Gene3D G3DSA:3.10.290.10 13 109 2.2E-36 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS02060 39df4fc8d4b497646834e7b0c5e24146 136 SMART SM00363 15 78 3.3E-12 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS02060 39df4fc8d4b497646834e7b0c5e24146 136 Pfam PF01479 S4 domain 15 61 4.2E-16 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS02060 39df4fc8d4b497646834e7b0c5e24146 136 SUPERFAMILY SSF55174 13 108 6.28E-30 T 11-11-2016 S40542_RS11255 506031f21542031b9652306526b379df 828 Pfam PF00593 TonB dependent receptor 561 799 3.7E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS11255 506031f21542031b9652306526b379df 828 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 147 1.7E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS11255 506031f21542031b9652306526b379df 828 Gene3D G3DSA:2.170.130.10 20 156 4.6E-27 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS11255 506031f21542031b9652306526b379df 828 Gene3D G3DSA:2.40.170.20 430 495 1.0E-70 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS11255 506031f21542031b9652306526b379df 828 Gene3D G3DSA:2.40.170.20 546 827 1.0E-70 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS11255 506031f21542031b9652306526b379df 828 Gene3D G3DSA:2.40.170.20 166 398 1.0E-70 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS11255 506031f21542031b9652306526b379df 828 SUPERFAMILY SSF56935 549 827 1.5E-99 T 11-11-2016 S40542_RS11255 506031f21542031b9652306526b379df 828 SUPERFAMILY SSF56935 20 387 1.5E-99 T 11-11-2016 S40542_RS11255 506031f21542031b9652306526b379df 828 SUPERFAMILY SSF56935 430 500 1.5E-99 T 11-11-2016 S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 Gene3D G3DSA:3.40.50.1000 92 222 4.8E-40 T 11-11-2016 IPR023214 HAD-like domain S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.8E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 2.8E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 2.8E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 220 5.6E-70 T 11-11-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 SUPERFAMILY SSF56784 2 222 3.91E-45 T 11-11-2016 IPR023214 HAD-like domain S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 96 195 6.0E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 9.9E-24 T 11-11-2016 IPR023214 HAD-like domain S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 113 189 4.1E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS19365 7818eb91d2b79bcc41c29a63ccec8d5a 224 Gene3D G3DSA:1.10.150.240 15 91 6.2E-18 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 Gene3D G3DSA:3.40.50.720 2 238 3.0E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 SUPERFAMILY SSF51735 2 242 9.54E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 Pfam PF00106 short chain dehydrogenase 3 201 6.8E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.5E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.5E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS20370 8e495ca305be5a30b5bdecbeca3fd548 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.5E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 7.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 7.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 441 7.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 7.3E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 SMART SM00388 264 330 7.9E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 485 7.3E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 Gene3D G3DSA:1.10.287.130 256 316 4.0E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 SMART SM00304 199 256 2.4E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 330 6.8E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 SUPERFAMILY SSF47384 248 331 3.53E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 SUPERFAMILY SSF55874 319 484 6.94E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 SMART SM00387 376 488 4.7E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 Pfam PF00672 HAMP domain 182 252 6.2E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS16165 bf1f5feb368b1855813fe8b4143f9952 490 Gene3D G3DSA:3.30.565.10 317 485 1.2E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06260 daf1133cb302d82a4b1c2328b6ff943e 318 Gene3D G3DSA:3.40.50.970 3 303 1.6E-87 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS06260 daf1133cb302d82a4b1c2328b6ff943e 318 SUPERFAMILY SSF52518 4 304 2.72E-67 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS06260 daf1133cb302d82a4b1c2328b6ff943e 318 Pfam PF00676 Dehydrogenase E1 component 12 304 3.8E-55 T 11-11-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 S40542_RS00110 7e5189285df51113988ef62c5396bdb8 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 1.9E-58 T 11-11-2016 IPR007456 Smg S40542_RS00110 7e5189285df51113988ef62c5396bdb8 157 Hamap MF_00598 Protein Smg [smg]. 1 157 31.241 T 11-11-2016 IPR007456 Smg S40542_RS01275 a018f3369cb2cdce5ce3a3f92484a233 167 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.2E-58 T 11-11-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 S40542_RS01275 a018f3369cb2cdce5ce3a3f92484a233 167 Pfam PF03737 Demethylmenaquinone methyltransferase 5 153 1.9E-33 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein S40542_RS01275 a018f3369cb2cdce5ce3a3f92484a233 167 SUPERFAMILY SSF89562 2 159 4.32E-39 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein S40542_RS01275 a018f3369cb2cdce5ce3a3f92484a233 167 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 1.2E-82 T 11-11-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 S40542_RS01275 a018f3369cb2cdce5ce3a3f92484a233 167 Gene3D G3DSA:3.50.30.40 2 160 1.6E-41 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein S40542_RS08935 d95dacde2623fdceb58055cfe6ef32df 397 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 346 388 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS08935 d95dacde2623fdceb58055cfe6ef32df 397 Gene3D G3DSA:1.10.10.60 306 345 6.1E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08935 d95dacde2623fdceb58055cfe6ef32df 397 SMART SM00342 309 392 1.8E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS08935 d95dacde2623fdceb58055cfe6ef32df 397 Pfam PF12833 Helix-turn-helix domain 315 393 7.5E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS08935 d95dacde2623fdceb58055cfe6ef32df 397 SUPERFAMILY SSF46689 345 395 7.17E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08935 d95dacde2623fdceb58055cfe6ef32df 397 Gene3D G3DSA:1.10.10.60 346 394 5.0E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08935 d95dacde2623fdceb58055cfe6ef32df 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 376 392 7.2E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS08935 d95dacde2623fdceb58055cfe6ef32df 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 361 376 7.2E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS01925 b4fd7d516b5f24bca9d069617301b352 252 Pfam PF02104 SURF1 family 31 232 1.9E-16 T 11-11-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01715 86e34ea82687400744fafc5148e14163 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 1.6E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS01715 86e34ea82687400744fafc5148e14163 153 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 7 29 1.5E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS01715 86e34ea82687400744fafc5148e14163 153 Gene3D G3DSA:3.30.700.10 12 109 8.8E-8 T 11-11-2016 S40542_RS01715 86e34ea82687400744fafc5148e14163 153 SUPERFAMILY SSF54523 12 84 3.45E-13 T 11-11-2016 S40542_RS01715 86e34ea82687400744fafc5148e14163 153 Pfam PF12019 Type II transport protein GspH 49 87 5.5E-5 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 S40542_RS08805 a9b3b66a40f90f4345f9aeb26c7222b9 144 Pfam PF14316 Domain of unknown function (DUF4381) 8 133 3.0E-19 T 11-11-2016 IPR025489 Protein of unknown function (DUF4381 S40542_RS01020 6afd7771ebdd30f69937be9d1423b4e9 229 SUPERFAMILY SSF48150 37 183 2.67E-37 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS01020 6afd7771ebdd30f69937be9d1423b4e9 229 Gene3D G3DSA:1.10.340.30 37 146 9.6E-25 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS01020 6afd7771ebdd30f69937be9d1423b4e9 229 Pfam PF03352 Methyladenine glycosylase 38 134 4.6E-17 T 11-11-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 S40542_RS11390 49a76cd55810d300556cb4d2b971f3a7 614 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS11390 49a76cd55810d300556cb4d2b971f3a7 614 SUPERFAMILY SSF52540 352 606 1.41E-86 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11390 49a76cd55810d300556cb4d2b971f3a7 614 Gene3D G3DSA:3.40.50.300 361 601 7.9E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11390 49a76cd55810d300556cb4d2b971f3a7 614 SUPERFAMILY SSF90123 29 349 6.8E-48 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS11390 49a76cd55810d300556cb4d2b971f3a7 614 Pfam PF00664 ABC transporter transmembrane region 48 309 7.3E-20 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 S40542_RS11390 49a76cd55810d300556cb4d2b971f3a7 614 SMART SM00382 391 582 1.0E-20 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11390 49a76cd55810d300556cb4d2b971f3a7 614 Gene3D G3DSA:1.20.1560.10 31 332 3.7E-34 T 11-11-2016 S40542_RS11390 49a76cd55810d300556cb4d2b971f3a7 614 Pfam PF00005 ABC transporter 383 536 5.8E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS01185 1ba7cbea139faf7f439a3b71d22dae4a 100 Pfam PF00276 Ribosomal protein L23 9 95 1.2E-33 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 S40542_RS01185 1ba7cbea139faf7f439a3b71d22dae4a 100 Gene3D G3DSA:3.30.70.330 6 98 2.0E-35 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 S40542_RS01185 1ba7cbea139faf7f439a3b71d22dae4a 100 SUPERFAMILY SSF54189 3 92 1.12E-32 T 11-11-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01185 1ba7cbea139faf7f439a3b71d22dae4a 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 23.007 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 S40542_RS01185 1ba7cbea139faf7f439a3b71d22dae4a 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 11-11-2016 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS18875 868d7d902c1f2f74b89dacd86a52fb78 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 13 280 1.7E-88 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18875 868d7d902c1f2f74b89dacd86a52fb78 286 PIRSF PIRSF005917 2 286 1.7E-99 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18875 868d7d902c1f2f74b89dacd86a52fb78 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 90 101 - T 11-11-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18875 868d7d902c1f2f74b89dacd86a52fb78 286 Gene3D G3DSA:3.40.1010.10 11 120 3.5E-15 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 S40542_RS18875 868d7d902c1f2f74b89dacd86a52fb78 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 212 2.9E-24 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 S40542_RS18875 868d7d902c1f2f74b89dacd86a52fb78 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 12 233 36.205 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS18875 868d7d902c1f2f74b89dacd86a52fb78 286 Gene3D G3DSA:3.30.950.10 121 234 1.6E-34 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 S40542_RS18875 868d7d902c1f2f74b89dacd86a52fb78 286 SUPERFAMILY SSF53790 10 231 4.32E-78 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 S40542_RS08285 bfad10c9b51b4c32dfa4da639ab85e19 93 SUPERFAMILY SSF47413 20 77 3.07E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS08285 bfad10c9b51b4c32dfa4da639ab85e19 93 Pfam PF01381 Helix-turn-helix 22 68 5.3E-7 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS08285 bfad10c9b51b4c32dfa4da639ab85e19 93 Gene3D G3DSA:1.10.260.40 19 79 6.5E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS06515 5d264bc6c72c1d5b748fa1bab1119ec5 319 Pfam PF00147 Fibrinogen beta and gamma chains, C-terminal globular domain 138 185 9.0E-10 T 11-11-2016 IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain S40542_RS06515 5d264bc6c72c1d5b748fa1bab1119ec5 319 SUPERFAMILY SSF56496 131 181 2.09E-13 T 11-11-2016 IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain S40542_RS06515 5d264bc6c72c1d5b748fa1bab1119ec5 319 Gene3D G3DSA:3.90.215.10 124 190 2.5E-14 T 11-11-2016 IPR014716 Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 S40542_RS07080 424c0a250b7bad2000371a1cec374c2c 796 Gene3D G3DSA:2.70.98.10 26 314 3.0E-84 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 S40542_RS07080 424c0a250b7bad2000371a1cec374c2c 796 SUPERFAMILY SSF74650 30 318 2.35E-73 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 S40542_RS07080 424c0a250b7bad2000371a1cec374c2c 796 SUPERFAMILY SSF48208 325 791 2.51E-75 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 S40542_RS07080 424c0a250b7bad2000371a1cec374c2c 796 Pfam PF09137 Glucodextranase, domain N 31 314 1.5E-78 T 11-11-2016 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 S40542_RS07080 424c0a250b7bad2000371a1cec374c2c 796 Gene3D G3DSA:1.50.10.10 331 794 1.1E-133 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 S40542_RS07080 424c0a250b7bad2000371a1cec374c2c 796 Pfam PF00723 Glycosyl hydrolases family 15 337 775 7.4E-37 T 11-11-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 S40542_RS00850 1d8bcdf020e0c40a52bda8820997aabb 352 Gene3D G3DSA:2.40.50.100 73 103 2.6E-12 T 11-11-2016 S40542_RS00850 1d8bcdf020e0c40a52bda8820997aabb 352 Gene3D G3DSA:2.40.50.100 178 209 2.6E-12 T 11-11-2016 S40542_RS00850 1d8bcdf020e0c40a52bda8820997aabb 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 347 4.8E-56 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS00850 1d8bcdf020e0c40a52bda8820997aabb 352 SUPERFAMILY SSF111369 65 212 6.28E-18 T 11-11-2016 S40542_RS00850 1d8bcdf020e0c40a52bda8820997aabb 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 282 9.7E-19 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS12135 7543ba864666eb79d9fe68a8674acfdb 168 SUPERFAMILY SSF51261 12 161 1.31E-21 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS12135 7543ba864666eb79d9fe68a8674acfdb 168 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 21 124 5.6E-15 T 11-11-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 S40542_RS12135 7543ba864666eb79d9fe68a8674acfdb 168 Gene3D G3DSA:2.70.70.10 20 161 1.6E-19 T 11-11-2016 S40542_RS00220 6ef2bac8cb39222b84b46db6df2249c2 447 SUPERFAMILY SSF51261 283 444 3.14E-41 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS00220 6ef2bac8cb39222b84b46db6df2249c2 447 Pfam PF01551 Peptidase family M23 343 440 1.7E-29 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS00220 6ef2bac8cb39222b84b46db6df2249c2 447 Gene3D G3DSA:2.70.70.10 313 445 1.0E-38 T 11-11-2016 S40542_RS00220 6ef2bac8cb39222b84b46db6df2249c2 447 Pfam PF05569 BlaR1 peptidase M56 77 255 2.8E-26 T 11-11-2016 IPR008756 Peptidase M56 S40542_RS15810 f66769995f16daff17f0b44eac7d1420 82 SUPERFAMILY SSF54565 1 76 4.32E-29 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15810 f66769995f16daff17f0b44eac7d1420 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.216 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15810 f66769995f16daff17f0b44eac7d1420 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 2.7E-29 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15810 f66769995f16daff17f0b44eac7d1420 82 Pfam PF00886 Ribosomal protein S16 8 68 3.4E-24 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15810 f66769995f16daff17f0b44eac7d1420 82 Gene3D G3DSA:3.30.1320.10 1 78 1.4E-33 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS15395 3706af5b133913a108da7e6d0013b16c 661 SUPERFAMILY SSF52540 184 293 3.1E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15395 3706af5b133913a108da7e6d0013b16c 661 SUPERFAMILY SSF52540 365 659 3.1E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15395 3706af5b133913a108da7e6d0013b16c 661 Gene3D G3DSA:3.40.50.300 478 658 2.3E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15395 3706af5b133913a108da7e6d0013b16c 661 Pfam PF13361 UvrD-like helicase C-terminal domain 572 643 2.6E-13 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 S40542_RS15395 3706af5b133913a108da7e6d0013b16c 661 Pfam PF00580 UvrD/REP helicase N-terminal domain 187 470 1.7E-34 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 S40542_RS15395 3706af5b133913a108da7e6d0013b16c 661 Gene3D G3DSA:3.40.50.300 375 473 8.7E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15395 3706af5b133913a108da7e6d0013b16c 661 Gene3D G3DSA:3.40.50.300 185 320 8.7E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18655 c947683eb3870ccdc2218977e10a6aa5 316 Pfam PF02706 Chain length determinant protein 22 212 5.7E-24 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 S40542_RS18655 c947683eb3870ccdc2218977e10a6aa5 316 Pfam PF13807 G-rich domain on putative tyrosine kinase 246 312 9.7E-8 T 11-11-2016 IPR032807 Tyrosine kinase, G-rich domain S40542_RS09690 4e60296b985c1d52bef5fb4254de0b8d 453 Pfam PF01554 MatE 17 176 1.1E-29 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS09690 4e60296b985c1d52bef5fb4254de0b8d 453 Pfam PF01554 MatE 243 404 3.4E-31 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS09690 4e60296b985c1d52bef5fb4254de0b8d 453 PIRSF PIRSF006603 5 452 3.4E-62 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS09690 4e60296b985c1d52bef5fb4254de0b8d 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 3.8E-85 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS07110 f3577804d3f9dff1c8e0fd19e8b4fdcd 542 Gene3D G3DSA:3.40.630.10 285 533 1.5E-59 T 11-11-2016 S40542_RS07110 f3577804d3f9dff1c8e0fd19e8b4fdcd 542 Gene3D G3DSA:3.40.630.10 34 88 1.5E-59 T 11-11-2016 S40542_RS07110 f3577804d3f9dff1c8e0fd19e8b4fdcd 542 SUPERFAMILY SSF52025 108 215 3.27E-7 T 11-11-2016 S40542_RS07110 f3577804d3f9dff1c8e0fd19e8b4fdcd 542 Pfam PF02225 PA domain 134 219 6.1E-6 T 11-11-2016 IPR003137 PA domain S40542_RS07110 f3577804d3f9dff1c8e0fd19e8b4fdcd 542 Pfam PF04389 Peptidase family M28 300 514 3.2E-43 T 11-11-2016 IPR007484 Peptidase M28 S40542_RS07110 f3577804d3f9dff1c8e0fd19e8b4fdcd 542 Gene3D G3DSA:3.50.30.30 109 221 4.8E-4 T 11-11-2016 S40542_RS07110 f3577804d3f9dff1c8e0fd19e8b4fdcd 542 SUPERFAMILY SSF53187 284 526 1.24E-61 T 11-11-2016 S40542_RS07110 f3577804d3f9dff1c8e0fd19e8b4fdcd 542 SUPERFAMILY SSF53187 33 82 1.24E-61 T 11-11-2016 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 SUPERFAMILY SSF56672 383 760 8.9E-103 T 11-11-2016 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 Gene3D G3DSA:1.10.287.690 465 501 1.4E-4 T 11-11-2016 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 Pfam PF03104 DNA polymerase family B, exonuclease domain 82 292 1.3E-17 T 11-11-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 ProSitePatterns PS00116 DNA polymerase family B signature. 540 548 - T 11-11-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 414 427 1.2E-11 T 11-11-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 538 546 1.2E-11 T 11-11-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 486 498 1.2E-11 T 11-11-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 Gene3D G3DSA:3.90.1600.10 509 562 6.9E-11 T 11-11-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 Gene3D G3DSA:3.90.1600.10 399 430 6.9E-11 T 11-11-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 Pfam PF00136 DNA polymerase family B 373 729 1.2E-41 T 11-11-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 Gene3D G3DSA:3.30.420.10 155 363 1.4E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 SUPERFAMILY SSF53098 8 387 6.26E-74 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS16080 38c7949956b7f19a2c7f867123101372 776 SMART SM00486 155 552 1.2E-70 T 11-11-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS04190 eb4b738c353b8c62f3ecedb79c2c1bb8 163 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-11-2016 IPR030489 Transcription regulator Rrf2-type, conserved site S40542_RS04190 eb4b738c353b8c62f3ecedb79c2c1bb8 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.0E-45 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type S40542_RS04190 eb4b738c353b8c62f3ecedb79c2c1bb8 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 135 9.7E-65 T 11-11-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 S40542_RS04190 eb4b738c353b8c62f3ecedb79c2c1bb8 163 Gene3D G3DSA:1.10.10.10 1 135 1.6E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04190 eb4b738c353b8c62f3ecedb79c2c1bb8 163 SUPERFAMILY SSF46785 2 133 4.43E-36 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04190 eb4b738c353b8c62f3ecedb79c2c1bb8 163 Pfam PF02082 Transcriptional regulator 1 83 1.0E-27 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 SMART SM00917 369 500 1.1E-28 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 SUPERFAMILY SSF51569 1 291 1.45E-96 T 11-11-2016 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 Gene3D G3DSA:3.20.20.70 1 347 4.0E-142 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 40.731 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 Pfam PF00682 HMGL-like 5 273 2.6E-91 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 498 1.2E-26 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 5.6E-224 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 S40542_RS19865 675788415b0b1b15a2e2c966b58188d0 515 SUPERFAMILY SSF110921 393 498 9.42E-21 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 S40542_RS14840 940e28e4840400820720943aea77cea9 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 1.8E-38 T 11-11-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 S40542_RS14840 940e28e4840400820720943aea77cea9 342 PIRSF PIRSF005632 1 342 2.5E-185 T 11-11-2016 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit S40542_RS14840 940e28e4840400820720943aea77cea9 342 SUPERFAMILY SSF51726 7 341 9.16E-69 T 11-11-2016 S40542_RS14840 940e28e4840400820720943aea77cea9 342 Gene3D G3DSA:3.20.20.210 2 340 4.5E-89 T 11-11-2016 S40542_RS10205 688b746988f31c7713fec45e0bfd44f0 312 SUPERFAMILY SSF50891 173 286 1.67E-10 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS10205 688b746988f31c7713fec45e0bfd44f0 312 Pfam PF02626 Allophanate hydrolase subunit 2 24 279 3.5E-78 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B S40542_RS10205 688b746988f31c7713fec45e0bfd44f0 312 SMART SM00797 23 296 7.9E-103 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B S40542_RS10205 688b746988f31c7713fec45e0bfd44f0 312 Gene3D G3DSA:2.40.100.10 188 290 9.3E-7 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS10205 688b746988f31c7713fec45e0bfd44f0 312 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 307 2.7E-86 T 11-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B S40542_RS01745 cdf1ac3c4be72d245fcc28f3317c5c71 314 Pfam PF13349 Putative adhesin 37 311 2.7E-11 T 11-11-2016 IPR025164 Putative adhesin S40542_RS19380 16a072f84b1729bfb9cc3717f76bd297 1358 Gene3D G3DSA:3.30.1330.60 75 195 1.0E-20 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS19380 16a072f84b1729bfb9cc3717f76bd297 1358 SUPERFAMILY SSF56935 1102 1148 9.16E-7 T 11-11-2016 S40542_RS19380 16a072f84b1729bfb9cc3717f76bd297 1358 SUPERFAMILY SSF56935 1184 1304 9.16E-7 T 11-11-2016 S40542_RS19380 16a072f84b1729bfb9cc3717f76bd297 1358 SUPERFAMILY SSF103088 80 195 7.85E-20 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS19380 16a072f84b1729bfb9cc3717f76bd297 1358 Pfam PF00691 OmpA family 88 190 1.5E-11 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 SUPERFAMILY SSF52540 29 225 2.06E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 SMART SM00382 37 178 1.5E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 Pfam PF13177 DNA polymerase III, delta subunit 20 178 9.4E-45 T 11-11-2016 S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 358 1.2E-25 T 11-11-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 717 839 2.2E-21 T 11-11-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 2.4E-136 T 11-11-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 SUPERFAMILY SSF48019 244 360 1.39E-22 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 Gene3D G3DSA:1.10.8.60 166 242 1.0E-31 T 11-11-2016 S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 Gene3D G3DSA:3.40.50.300 15 165 3.5E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14865 5d585e48d703e6580f2bdfc3f6019d50 842 Gene3D G3DSA:1.20.272.10 243 359 2.3E-31 T 11-11-2016 S40542_RS05250 f073bc232231d44623aa7f9e9132b799 153 Hamap MF_01114 Regulatory protein RecX [recX]. 3 153 11.982 T 11-11-2016 IPR003783 Regulatory protein RecX GO:0006282 S40542_RS05250 f073bc232231d44623aa7f9e9132b799 153 Gene3D G3DSA:1.10.10.10 8 54 2.0E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS05250 f073bc232231d44623aa7f9e9132b799 153 Pfam PF02631 RecX family 31 149 3.1E-25 T 11-11-2016 IPR003783 Regulatory protein RecX GO:0006282 S40542_RS05250 f073bc232231d44623aa7f9e9132b799 153 Gene3D G3DSA:1.10.10.10 101 151 7.1E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS05250 f073bc232231d44623aa7f9e9132b799 153 Gene3D G3DSA:1.10.10.10 55 100 2.4E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 4.1E-8 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 4.1E-8 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 4.1E-8 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 Gene3D G3DSA:1.20.5.510 7 40 2.2E-8 T 11-11-2016 S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 5.9E-73 T 11-11-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 Gene3D G3DSA:2.102.10.10 48 189 1.5E-37 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 SUPERFAMILY SSF50022 30 188 9.67E-43 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 Pfam PF00355 Rieske [2Fe-2S] domain 108 177 8.5E-12 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 S40542_RS18920 7c278b07da9c0d678eec743a74d44d1e 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 1.7E-17 T 11-11-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 SUPERFAMILY SSF52317 4 194 1.6E-37 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 Pfam PF12833 Helix-turn-helix domain 235 313 1.7E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 Gene3D G3DSA:3.40.50.880 4 215 1.9E-47 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 SUPERFAMILY SSF46689 213 263 3.54E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 Gene3D G3DSA:1.10.10.60 266 315 2.0E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 SUPERFAMILY SSF46689 265 315 3.18E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 Pfam PF01965 DJ-1/PfpI family 4 173 2.9E-19 T 11-11-2016 IPR002818 DJ-1/PfpI S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 SMART SM00342 229 312 2.0E-28 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS19955 7b4f7ab6bac1e704c3a5b634e77b03f4 321 Gene3D G3DSA:1.10.10.60 216 265 4.2E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS01215 a713b7a3db831d00cb59a5c984848abf 63 SUPERFAMILY SSF46561 1 61 3.4E-23 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01215 a713b7a3db831d00cb59a5c984848abf 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01215 a713b7a3db831d00cb59a5c984848abf 63 Gene3D G3DSA:1.10.287.310 1 60 1.2E-28 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01215 a713b7a3db831d00cb59a5c984848abf 63 Pfam PF00831 Ribosomal L29 protein 4 60 6.8E-25 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01215 a713b7a3db831d00cb59a5c984848abf 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.0E-23 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS01215 a713b7a3db831d00cb59a5c984848abf 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-11-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS13475 64e1b335372d074566d845879648a393 321 Gene3D G3DSA:3.60.10.10 43 320 2.2E-19 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS13475 64e1b335372d074566d845879648a393 321 SUPERFAMILY SSF56219 35 321 7.07E-33 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS13475 64e1b335372d074566d845879648a393 321 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 46 313 5.7E-20 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS13425 ecee824a170d1883823355ad29440582 1049 Pfam PF00873 AcrB/AcrD/AcrF family 9 1023 9.4E-161 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 SUPERFAMILY SSF82866 798 1026 8.5E-47 T 11-11-2016 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 SUPERFAMILY SSF82866 292 491 3.4E-35 T 11-11-2016 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 Gene3D G3DSA:3.30.2090.10 726 799 9.8E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS13425 ecee824a170d1883823355ad29440582 1049 SUPERFAMILY SSF82714 183 267 3.4E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS13425 ecee824a170d1883823355ad29440582 1049 Gene3D G3DSA:1.20.1640.10 290 501 6.9E-43 T 11-11-2016 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 Gene3D G3DSA:3.30.2090.10 182 268 3.4E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS13425 ecee824a170d1883823355ad29440582 1049 SUPERFAMILY SSF82693 141 182 3.4E-11 T 11-11-2016 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 SUPERFAMILY SSF82693 269 325 3.4E-11 T 11-11-2016 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 Gene3D G3DSA:3.30.70.1430 50 143 5.4E-20 T 11-11-2016 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 Gene3D G3DSA:1.10.3850.10 806 1024 7.0E-54 T 11-11-2016 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 1.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 SUPERFAMILY SSF82693 49 135 3.66E-17 T 11-11-2016 S40542_RS13425 ecee824a170d1883823355ad29440582 1049 SUPERFAMILY SSF82714 726 799 6.67E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 514 3.7E-43 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 3.9E-9 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 268 297 3.9E-9 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 SMART SM00283 254 515 1.1E-57 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 Pfam PF08447 PAS fold 30 114 3.3E-17 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 Gene3D G3DSA:3.30.450.20 19 113 1.1E-23 T 11-11-2016 S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 112 2.9E-16 T 11-11-2016 IPR000014 PAS domain S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 SUPERFAMILY SSF58104 260 516 1.74E-64 T 11-11-2016 S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 Gene3D G3DSA:1.10.287.950 268 484 6.2E-51 T 11-11-2016 S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 SMART SM00091 8 74 1.6E-5 T 11-11-2016 IPR000014 PAS domain S40542_RS10675 b54f51152a5450c0e23f6762811bf4e5 516 SUPERFAMILY SSF55785 20 114 1.1E-27 T 11-11-2016 IPR000014 PAS domain S40542_RS17905 2a325da423cc6c276bdec02e70855ada 357 Gene3D G3DSA:3.30.450.20 36 141 2.0E-25 T 11-11-2016 S40542_RS17905 2a325da423cc6c276bdec02e70855ada 357 SUPERFAMILY SSF55785 33 139 1.41E-23 T 11-11-2016 IPR000014 PAS domain S40542_RS17905 2a325da423cc6c276bdec02e70855ada 357 SMART SM00086 101 143 1.4E-5 T 11-11-2016 IPR001610 PAC motif S40542_RS17905 2a325da423cc6c276bdec02e70855ada 357 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 145 6.3E-16 T 11-11-2016 IPR000014 PAS domain S40542_RS17905 2a325da423cc6c276bdec02e70855ada 357 SMART SM00091 25 95 1.7E-4 T 11-11-2016 IPR000014 PAS domain S40542_RS17905 2a325da423cc6c276bdec02e70855ada 357 Pfam PF13426 PAS domain 37 141 2.9E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS06860 4f49a5e3be4f8ac95b6fdf57d04c1f32 242 Pfam PF04397 LytTr DNA-binding domain 136 237 1.7E-15 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS06860 4f49a5e3be4f8ac95b6fdf57d04c1f32 242 Gene3D G3DSA:2.40.50.40 125 197 1.4E-13 T 11-11-2016 S40542_RS06860 4f49a5e3be4f8ac95b6fdf57d04c1f32 242 Pfam PF00072 Response regulator receiver domain 1 108 5.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06860 4f49a5e3be4f8ac95b6fdf57d04c1f32 242 SMART SM00850 133 238 2.8E-15 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS06860 4f49a5e3be4f8ac95b6fdf57d04c1f32 242 SUPERFAMILY SSF52172 1 149 3.56E-28 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS06860 4f49a5e3be4f8ac95b6fdf57d04c1f32 242 SMART SM00448 2 108 2.1E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06860 4f49a5e3be4f8ac95b6fdf57d04c1f32 242 Gene3D G3DSA:3.40.50.2300 1 119 3.9E-28 T 11-11-2016 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 Pfam PF14312 FG-GAP repeat 188 236 1.7E-16 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 Pfam PF14312 FG-GAP repeat 300 348 3.3E-14 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 Pfam PF14312 FG-GAP repeat 24 71 7.9E-15 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 Pfam PF14312 FG-GAP repeat 133 181 5.7E-16 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 Pfam PF14312 FG-GAP repeat 355 401 4.8E-13 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 Pfam PF14312 FG-GAP repeat 243 293 1.3E-14 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 Gene3D G3DSA:2.130.10.80 103 360 5.3E-8 T 11-11-2016 IPR015916 Galactose oxidase, beta-propeller S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 SMART SM00191 201 250 27.0 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 SMART SM00191 146 195 11.0 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 SMART SM00191 35 85 15.0 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 S40542_RS12600 8844aeaeaa280536417732df19bd9ea0 424 SUPERFAMILY SSF50965 120 358 3.92E-11 T 11-11-2016 IPR011043 Galactose oxidase/kelch, beta-propeller S40542_RS00205 ea6e79727d6c1fe7fa8679222208a46c 136 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 23 127 3.1E-31 T 11-11-2016 IPR018673 Protein of unknown function DUF2141 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 Pfam PF00549 CoA-ligase 151 270 5.6E-22 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-11-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 Gene3D G3DSA:3.40.50.261 120 286 1.2E-78 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 PIRSF PIRSF001553 1 289 2.6E-135 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 6.1E-42 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 6.1E-42 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 6.1E-42 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 6.1E-42 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 SMART SM00881 4 100 2.6E-36 T 11-11-2016 IPR003781 CoA-binding GO:0048037 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 Gene3D G3DSA:3.40.50.720 2 119 1.0E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 8.4E-146 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 SUPERFAMILY SSF52210 123 285 1.44E-57 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 Pfam PF02629 CoA binding domain 6 99 3.7E-31 T 11-11-2016 IPR003781 CoA-binding GO:0048037 S40542_RS12030 7544f7e55dd1d40b389a7c838b17d116 290 SUPERFAMILY SSF51735 1 122 2.09E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 SUPERFAMILY SSF55681 243 525 7.08E-100 T 11-11-2016 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 SUPERFAMILY SSF81271 3 61 5.56E-15 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Pfam PF03129 Anticodon binding domain 541 630 6.9E-22 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.333 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Gene3D G3DSA:3.10.20.30 1 64 7.6E-22 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.1E-55 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.1E-55 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.1E-55 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.1E-55 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.1E-55 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 SUPERFAMILY SSF52954 529 634 4.98E-32 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Pfam PF02824 TGS domain 4 61 4.8E-11 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Gene3D G3DSA:3.30.930.10 242 530 4.3E-123 T 11-11-2016 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 2.5E-14 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Gene3D G3DSA:3.30.980.10 188 224 1.6E-41 T 11-11-2016 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Gene3D G3DSA:3.30.980.10 66 129 1.6E-41 T 11-11-2016 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Gene3D G3DSA:3.30.54.20 131 187 8.3E-22 T 11-11-2016 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 529 2.6E-51 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 SUPERFAMILY SSF55186 63 241 3.4E-66 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 SMART SM00863 170 219 7.5E-20 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 Gene3D G3DSA:3.40.50.800 532 635 1.4E-35 T 11-11-2016 IPR004154 Anticodon-binding S40542_RS11375 f61c1e6d3abf91356c829edb325cf17f 636 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 3.9E-243 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 S40542_RS02795 28fea47e25dc3efb2b237872c9f83076 112 SUPERFAMILY SSF46785 17 104 8.49E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02795 28fea47e25dc3efb2b237872c9f83076 112 Gene3D G3DSA:1.10.10.10 5 104 8.8E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02795 28fea47e25dc3efb2b237872c9f83076 112 Pfam PF01638 HxlR-like helix-turn-helix 26 105 9.0E-15 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type S40542_RS06190 84575e8e5b88f80ed1c758aad63ab218 277 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 26 243 2.2E-30 T 11-11-2016 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 S40542_RS06190 84575e8e5b88f80ed1c758aad63ab218 277 SUPERFAMILY SSF110710 4 253 4.45E-48 T 11-11-2016 S40542_RS08965 369069ef939d7ead61adb1a42baf69bb 280 Gene3D G3DSA:1.10.3150.10 12 278 3.9E-59 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS08965 369069ef939d7ead61adb1a42baf69bb 280 SUPERFAMILY SSF109604 12 278 4.22E-55 T 11-11-2016 S40542_RS08965 369069ef939d7ead61adb1a42baf69bb 280 Pfam PF08668 HDOD domain 18 212 9.5E-47 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD S40542_RS01850 c081e77843567c2aa14f6c20f8cc6143 177 Pfam PF04186 FxsA cytoplasmic membrane protein 7 112 6.1E-34 T 11-11-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 S40542_RS02460 0edaf69f62f2efe20bdced76a865bd85 397 SMART SM00471 149 284 4.6E-14 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS02460 0edaf69f62f2efe20bdced76a865bd85 397 Pfam PF01966 HD domain 154 274 6.7E-19 T 11-11-2016 IPR006674 HD domain S40542_RS02460 0edaf69f62f2efe20bdced76a865bd85 397 SUPERFAMILY SSF109604 143 314 4.04E-34 T 11-11-2016 S40542_RS02460 0edaf69f62f2efe20bdced76a865bd85 397 Pfam PF11871 Domain of unknown function (DUF3391) 2 121 2.9E-19 T 11-11-2016 IPR021812 Protein of unknown function DUF3391 S40542_RS02460 0edaf69f62f2efe20bdced76a865bd85 397 TIGRFAM TIGR00277 HDIG: HDIG domain 153 243 4.0E-9 T 11-11-2016 IPR006675 HDIG domain S40542_RS02460 0edaf69f62f2efe20bdced76a865bd85 397 Gene3D G3DSA:1.10.3210.10 150 278 1.2E-20 T 11-11-2016 IPR006674 HD domain S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 387 2.7E-21 T 11-11-2016 IPR000160 GGDEF domain S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 SUPERFAMILY SSF55073 240 391 1.65E-22 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 SMART SM00267 223 392 2.9E-16 T 11-11-2016 IPR000160 GGDEF domain S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 231 389 3.6E-12 T 11-11-2016 IPR000160 GGDEF domain S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 Pfam PF00563 EAL domain 413 644 7.9E-49 T 11-11-2016 IPR001633 EAL domain S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 Gene3D G3DSA:3.30.70.270 236 393 3.3E-23 T 11-11-2016 S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 SUPERFAMILY SSF141868 413 644 2.75E-48 T 11-11-2016 IPR001633 EAL domain S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 Gene3D G3DSA:3.20.20.450 410 645 1.7E-46 T 11-11-2016 IPR001633 EAL domain S40542_RS17365 01c7c3f6f5d5b13cb6107828234d8fc2 647 SMART SM00052 406 647 1.5E-18 T 11-11-2016 IPR001633 EAL domain S40542_RS14035 19e6769de54e8044105cc621f5c920e9 305 Pfam PF01261 Xylose isomerase-like TIM barrel 38 225 1.5E-24 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain S40542_RS14035 19e6769de54e8044105cc621f5c920e9 305 SUPERFAMILY SSF51658 10 302 2.23E-50 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain S40542_RS14035 19e6769de54e8044105cc621f5c920e9 305 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 12 302 1.0E-98 T 11-11-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 S40542_RS14035 19e6769de54e8044105cc621f5c920e9 305 Gene3D G3DSA:3.20.20.150 11 302 1.8E-67 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain S40542_RS19135 d8f4cdea1b31eced2787d86de7a7eafb 229 SUPERFAMILY SSF53850 6 226 3.65E-33 T 11-11-2016 S40542_RS19135 d8f4cdea1b31eced2787d86de7a7eafb 229 Gene3D G3DSA:3.40.190.10 187 226 5.3E-17 T 11-11-2016 S40542_RS19135 d8f4cdea1b31eced2787d86de7a7eafb 229 Gene3D G3DSA:3.40.190.10 6 84 5.3E-17 T 11-11-2016 S40542_RS19135 d8f4cdea1b31eced2787d86de7a7eafb 229 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 7 226 5.7E-20 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS00505 fb1b5f05c0f3efa3a7fa8fa4a7738f7e 537 Pfam PF03109 ABC1 family 114 231 5.2E-33 T 11-11-2016 IPR004147 UbiB domain S40542_RS00505 fb1b5f05c0f3efa3a7fa8fa4a7738f7e 537 Gene3D G3DSA:3.90.1200.10 250 296 1.6E-4 T 11-11-2016 S40542_RS00505 fb1b5f05c0f3efa3a7fa8fa4a7738f7e 537 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 444 5.4E-179 T 11-11-2016 IPR010232 Probable protein kinase UbiB GO:0006744 S40542_RS00505 fb1b5f05c0f3efa3a7fa8fa4a7738f7e 537 SUPERFAMILY SSF56112 193 437 1.39E-46 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS00505 fb1b5f05c0f3efa3a7fa8fa4a7738f7e 537 SUPERFAMILY SSF56112 91 158 1.39E-46 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS00505 fb1b5f05c0f3efa3a7fa8fa4a7738f7e 537 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 533 53.073 T 11-11-2016 IPR010232 Probable protein kinase UbiB GO:0006744 S40542_RS09345 3cace63351864e80aa40ea36c2b6bff1 152 Gene3D G3DSA:3.40.630.30 16 136 7.4E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS09345 3cace63351864e80aa40ea36c2b6bff1 152 SUPERFAMILY SSF55729 3 140 4.53E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS09345 3cace63351864e80aa40ea36c2b6bff1 152 Pfam PF13673 Acetyltransferase (GNAT) domain 41 136 4.3E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS17420 5080909f6e3c842488d617e47f8a43e4 244 Gene3D G3DSA:1.10.10.60 200 235 2.2E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS17420 5080909f6e3c842488d617e47f8a43e4 244 SMART SM00342 158 240 1.2E-12 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS17420 5080909f6e3c842488d617e47f8a43e4 244 SUPERFAMILY SSF46689 195 238 1.12E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS17420 5080909f6e3c842488d617e47f8a43e4 244 Pfam PF12833 Helix-turn-helix domain 165 238 1.3E-13 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS09470 f275a696c237e185e9ff2bcf3c83307b 236 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 5.2E-83 T 11-11-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 S40542_RS09470 f275a696c237e185e9ff2bcf3c83307b 236 Gene3D G3DSA:3.40.50.150 22 221 1.4E-40 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09470 f275a696c237e185e9ff2bcf3c83307b 236 SUPERFAMILY SSF53335 15 231 2.5E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09470 f275a696c237e185e9ff2bcf3c83307b 236 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 37.35 T 11-11-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 S40542_RS09470 f275a696c237e185e9ff2bcf3c83307b 236 Pfam PF13489 Methyltransferase domain 52 204 1.4E-24 T 11-11-2016 S40542_RS01080 152a341127a104497a88967442341a13 170 Pfam PF13511 Domain of unknown function (DUF4124) 16 50 2.1E-9 T 11-11-2016 IPR025392 Domain of unknown function DUF4124 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Pfam PF08447 PAS fold 301 383 1.6E-13 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Pfam PF08447 PAS fold 559 647 5.3E-16 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Gene3D G3DSA:1.10.287.130 665 732 4.7E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SUPERFAMILY SSF47384 655 737 6.28E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00086 611 654 1.1E-8 T 11-11-2016 IPR001610 PAC motif S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00086 349 391 39.0 T 11-11-2016 IPR001610 PAC motif S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00086 482 523 0.99 T 11-11-2016 IPR001610 PAC motif S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Gene3D G3DSA:3.30.450.20 395 514 6.9E-13 T 11-11-2016 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SUPERFAMILY SSF55785 410 526 6.46E-12 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 735 2.9E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Gene3D G3DSA:3.30.565.10 737 887 1.2E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00091 535 603 0.0067 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00091 276 343 0.078 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00091 403 473 1.9 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00091 153 219 37.0 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 779 888 2.9E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 400 530 1.2E-6 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 533 655 6.6E-10 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Pfam PF08448 PAS fold 419 525 2.0E-9 T 11-11-2016 IPR013656 PAS fold-4 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 831 1.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 845 1.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 868 1.8E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SUPERFAMILY SSF55785 520 652 3.32E-18 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Gene3D G3DSA:3.30.450.20 515 664 2.3E-31 T 11-11-2016 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00388 667 736 9.7E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SMART SM00387 778 891 4.5E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 Gene3D G3DSA:3.30.450.20 267 388 2.0E-20 T 11-11-2016 S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SUPERFAMILY SSF55785 263 387 1.59E-13 T 11-11-2016 IPR000014 PAS domain S40542_RS09950 22da142aad043215da8965820e92f9a0 893 SUPERFAMILY SSF55874 725 889 8.64E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS19185 308d5948d84cccc0b4a3f2865a7fb63b 337 Pfam PF02163 Peptidase family M50 205 239 1.5E-6 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 S40542_RS16155 cacdbee9d019619cb8effb36e262aed5 260 Pfam PF06468 Spondin_N 83 195 6.2E-6 T 11-11-2016 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 SUPERFAMILY SSF52540 126 241 1.18E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 SUPERFAMILY SSF52540 4 95 1.18E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 Pfam PF00005 ABC transporter 336 469 5.0E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 Pfam PF00005 ABC transporter 19 185 1.3E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 SMART SM00382 344 513 1.7E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 SMART SM00382 28 230 1.5E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 Pfam PF12848 ABC transporter 225 297 5.2E-12 T 11-11-2016 IPR032781 ABC-transporter extension domain S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 Gene3D G3DSA:3.40.50.300 325 556 5.1E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 Gene3D G3DSA:3.40.50.300 5 282 2.2E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 Pfam PF16326 ABC transporter C-terminal domain 564 633 4.1E-17 T 11-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 S40542_RS11555 f77811f6be849cfa28d73c07d9ea8098 638 SUPERFAMILY SSF52540 326 516 4.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.6E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.6E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 PRINTS PR00175 Sodium/alanine symporter signature 349 371 1.6E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.6E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.6E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 PRINTS PR00175 Sodium/alanine symporter signature 409 429 1.6E-54 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 440 3.0E-154 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS06970 6ce25bda390c1c526a185d0cc390a9a2 471 Pfam PF01235 Sodium:alanine symporter family 49 452 1.3E-155 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 S40542_RS18150 d0db6167e0e93f3f4ff66838220da671 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 104 1.9E-30 T 11-11-2016 IPR003849 Preprotein translocase YajC S40542_RS18150 d0db6167e0e93f3f4ff66838220da671 112 SMART SM01323 20 104 9.8E-40 T 11-11-2016 IPR003849 Preprotein translocase YajC S40542_RS18150 d0db6167e0e93f3f4ff66838220da671 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 3.8E-16 T 11-11-2016 IPR003849 Preprotein translocase YajC S40542_RS18150 d0db6167e0e93f3f4ff66838220da671 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 3.8E-16 T 11-11-2016 IPR003849 Preprotein translocase YajC S40542_RS18150 d0db6167e0e93f3f4ff66838220da671 112 Pfam PF02699 Preprotein translocase subunit 24 101 2.4E-26 T 11-11-2016 IPR003849 Preprotein translocase YajC S40542_RS03135 54d779acbc3b884a7bfdd589b39db956 686 Pfam PF00912 Transglycosylase 10 183 5.2E-49 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 S40542_RS03135 54d779acbc3b884a7bfdd589b39db956 686 Gene3D G3DSA:3.40.710.10 186 549 1.6E-66 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS03135 54d779acbc3b884a7bfdd589b39db956 686 SUPERFAMILY SSF53955 4 215 7.31E-60 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS03135 54d779acbc3b884a7bfdd589b39db956 686 Gene3D G3DSA:1.10.3810.10 16 185 9.1E-51 T 11-11-2016 S40542_RS03135 54d779acbc3b884a7bfdd589b39db956 686 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 4 657 3.7E-206 T 11-11-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 S40542_RS03135 54d779acbc3b884a7bfdd589b39db956 686 SUPERFAMILY SSF56601 165 578 3.81E-83 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS03135 54d779acbc3b884a7bfdd589b39db956 686 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 493 2.9E-12 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 S40542_RS12265 0cd1bc5cd373ae7c3b16a6a137cf9f35 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 51 1.7E-13 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 S40542_RS12265 0cd1bc5cd373ae7c3b16a6a137cf9f35 342 Pfam PF13377 Periplasmic binding protein-like domain 180 340 1.6E-34 T 11-11-2016 S40542_RS12265 0cd1bc5cd373ae7c3b16a6a137cf9f35 342 SUPERFAMILY SSF47413 6 64 2.93E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS12265 0cd1bc5cd373ae7c3b16a6a137cf9f35 342 Gene3D G3DSA:3.40.50.2300 184 323 7.2E-47 T 11-11-2016 S40542_RS12265 0cd1bc5cd373ae7c3b16a6a137cf9f35 342 SUPERFAMILY SSF53822 82 341 6.09E-56 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS12265 0cd1bc5cd373ae7c3b16a6a137cf9f35 342 SMART SM00354 6 76 4.7E-13 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 S40542_RS12265 0cd1bc5cd373ae7c3b16a6a137cf9f35 342 Gene3D G3DSA:1.10.260.40 8 58 2.4E-20 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS12265 0cd1bc5cd373ae7c3b16a6a137cf9f35 342 Gene3D G3DSA:3.40.50.2300 59 183 6.0E-23 T 11-11-2016 S40542_RS12590 6d0717fd2b1f36b126e2217a6e25e928 464 Pfam PF02839 Carbohydrate binding domain 413 453 2.5E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS12590 6d0717fd2b1f36b126e2217a6e25e928 464 SMART SM00495 411 456 1.8E-9 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS12590 6d0717fd2b1f36b126e2217a6e25e928 464 SUPERFAMILY SSF55486 158 357 9.36E-10 T 11-11-2016 S40542_RS12590 6d0717fd2b1f36b126e2217a6e25e928 464 SUPERFAMILY SSF51055 406 459 2.35E-11 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS12590 6d0717fd2b1f36b126e2217a6e25e928 464 Pfam PF13688 Metallo-peptidase family M12 156 363 5.1E-13 T 11-11-2016 S40542_RS12590 6d0717fd2b1f36b126e2217a6e25e928 464 Gene3D G3DSA:3.40.390.10 316 356 3.2E-4 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS12590 6d0717fd2b1f36b126e2217a6e25e928 464 Gene3D G3DSA:3.40.390.10 171 315 3.2E-4 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS12590 6d0717fd2b1f36b126e2217a6e25e928 464 Gene3D G3DSA:2.10.10.20 408 456 1.1E-12 T 11-11-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 S40542_RS20235 c1be887e3c21c31bb1246eb371b87104 124 Gene3D G3DSA:3.30.1130.10 2 118 5.1E-35 T 11-11-2016 S40542_RS20235 c1be887e3c21c31bb1246eb371b87104 124 SMART SM00905 6 117 3.6E-34 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS20235 c1be887e3c21c31bb1246eb371b87104 124 SUPERFAMILY SSF55620 4 118 4.06E-28 T 11-11-2016 S40542_RS20235 c1be887e3c21c31bb1246eb371b87104 124 TIGRFAM TIGR00526 folB_dom: FolB domain 4 121 1.8E-27 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS20235 c1be887e3c21c31bb1246eb371b87104 124 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.1E-27 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS15485 20a7ddece56f8f7cf8d3f92ea83cfb74 247 Pfam PF07070 SpoOM protein 2 217 7.0E-73 T 11-11-2016 IPR009776 Sporulation stage 0, protein M S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 PIRSF PIRSF002869 1 509 1.3E-147 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 499 2.8E-130 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 PRINTS PR01806 Virulence factor MviN signature 128 152 7.7E-77 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 PRINTS PR01806 Virulence factor MviN signature 407 424 7.7E-77 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 PRINTS PR01806 Virulence factor MviN signature 254 280 7.7E-77 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 PRINTS PR01806 Virulence factor MviN signature 355 374 7.7E-77 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 PRINTS PR01806 Virulence factor MviN signature 40 56 7.7E-77 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 PRINTS PR01806 Virulence factor MviN signature 152 173 7.7E-77 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 PRINTS PR01806 Virulence factor MviN signature 21 40 7.7E-77 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS15965 47daab30c2ab6744fb39ef97e7501948 511 Pfam PF03023 MviN-like protein 16 465 1.7E-138 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ S40542_RS18190 a78cb742933b6399d3a2b62a8567b012 275 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS18190 a78cb742933b6399d3a2b62a8567b012 275 SMART SM00382 53 262 4.1E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS18190 a78cb742933b6399d3a2b62a8567b012 275 Gene3D G3DSA:3.40.50.300 23 266 1.7E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18190 a78cb742933b6399d3a2b62a8567b012 275 SUPERFAMILY SSF52540 26 261 1.19E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18190 a78cb742933b6399d3a2b62a8567b012 275 Pfam PF00005 ABC transporter 44 200 1.1E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS18190 a78cb742933b6399d3a2b62a8567b012 275 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 29 275 8.3E-128 T 11-11-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 295 349 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 69 519 5.8E-136 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 16 662 0.0 T 11-11-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 135 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 426 445 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 242 261 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 181 193 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 293 314 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 339 354 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 213 231 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 363 384 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 476 497 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 60 85 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 139 163 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 398 416 5.5E-96 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 Gene3D G3DSA:1.20.210.10 51 604 3.2E-190 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12380 e33986f5cd826f03b7549f03adefd5d5 678 SUPERFAMILY SSF81442 56 575 1.57E-178 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS20280 b355036573d491c7c8d1c1dc1291a77b 308 SUPERFAMILY SSF103481 36 138 2.75E-12 T 11-11-2016 S40542_RS20280 b355036573d491c7c8d1c1dc1291a77b 308 SUPERFAMILY SSF103481 192 289 7.59E-13 T 11-11-2016 S40542_RS20280 b355036573d491c7c8d1c1dc1291a77b 308 Pfam PF00892 EamA-like transporter family 150 286 2.8E-17 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS20280 b355036573d491c7c8d1c1dc1291a77b 308 Pfam PF00892 EamA-like transporter family 4 135 1.1E-15 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS03240 ea504f9b195acdf534022b71fbd1bfee 192 Pfam PF10881 Protein of unknown function (DUF2726) 37 158 1.5E-35 T 11-11-2016 IPR024402 Domain of unknown function DUF2726 S40542_RS06625 7618a4c31fd59138fd7df81049f2821a 246 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 240 1.7E-100 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 S40542_RS06625 7618a4c31fd59138fd7df81049f2821a 246 Gene3D G3DSA:3.40.1160.10 5 240 8.7E-83 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS06625 7618a4c31fd59138fd7df81049f2821a 246 PIRSF PIRSF005650 4 246 3.7E-88 T 11-11-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 S40542_RS06625 7618a4c31fd59138fd7df81049f2821a 246 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 42.893 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 S40542_RS06625 7618a4c31fd59138fd7df81049f2821a 246 SUPERFAMILY SSF53633 7 240 1.44E-70 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS06625 7618a4c31fd59138fd7df81049f2821a 246 Pfam PF00696 Amino acid kinase family 11 219 8.6E-28 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS03150 617414f4b6750c1ace52cdc5ec7afe61 350 Pfam PF00756 Putative esterase 38 208 7.7E-24 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS03150 617414f4b6750c1ace52cdc5ec7afe61 350 SUPERFAMILY SSF53474 266 349 1.87E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03150 617414f4b6750c1ace52cdc5ec7afe61 350 SUPERFAMILY SSF53474 19 176 1.87E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03150 617414f4b6750c1ace52cdc5ec7afe61 350 Gene3D G3DSA:3.40.50.1820 160 242 3.0E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03150 617414f4b6750c1ace52cdc5ec7afe61 350 SUPERFAMILY SSF53474 141 250 1.04E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03150 617414f4b6750c1ace52cdc5ec7afe61 350 Gene3D G3DSA:3.40.50.1820 265 346 2.7E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03150 617414f4b6750c1ace52cdc5ec7afe61 350 Gene3D G3DSA:3.40.50.1820 18 159 2.7E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00215 6d490f5b54e4f20e02c84b8194547eae 124 SUPERFAMILY SSF46785 2 119 8.71E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS00215 6d490f5b54e4f20e02c84b8194547eae 124 Pfam PF03965 Penicillinase repressor 6 117 1.5E-20 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 S40542_RS00215 6d490f5b54e4f20e02c84b8194547eae 124 Gene3D G3DSA:1.10.10.10 2 71 8.3E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS00215 6d490f5b54e4f20e02c84b8194547eae 124 PIRSF PIRSF019455 3 124 2.8E-21 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 S40542_RS05695 db26776e16a11b1a84c4d096f0c10f04 505 Pfam PF01928 CYTH domain 3 199 9.9E-22 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 S40542_RS05695 db26776e16a11b1a84c4d096f0c10f04 505 SUPERFAMILY SSF55154 1 214 1.24E-41 T 11-11-2016 IPR033469 CYTH-like domain Reactome: R-HSA-196819 S40542_RS05695 db26776e16a11b1a84c4d096f0c10f04 505 SMART SM01118 2 205 1.1E-36 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 S40542_RS05695 db26776e16a11b1a84c4d096f0c10f04 505 Gene3D G3DSA:2.40.320.10 2 209 9.6E-30 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 S40542_RS17300 81801b510c6773f96f4471cc8770015f 254 Gene3D G3DSA:3.40.50.620 74 206 8.5E-14 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS17300 81801b510c6773f96f4471cc8770015f 254 Pfam PF02698 DUF218 domain 79 236 8.0E-24 T 11-11-2016 IPR003848 Domain of unknown function DUF218 S40542_RS14085 fea968ce8cc9a8b693062bb8a54d1844 410 SMART SM00490 256 337 1.3E-32 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS14085 fea968ce8cc9a8b693062bb8a54d1844 410 SMART SM00487 20 220 2.8E-58 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS14085 fea968ce8cc9a8b693062bb8a54d1844 410 Pfam PF00270 DEAD/DEAH box helicase 25 191 1.5E-51 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 S40542_RS14085 fea968ce8cc9a8b693062bb8a54d1844 410 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site S40542_RS14085 fea968ce8cc9a8b693062bb8a54d1844 410 Gene3D G3DSA:3.40.50.300 210 365 1.8E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14085 fea968ce8cc9a8b693062bb8a54d1844 410 Pfam PF00271 Helicase conserved C-terminal domain 231 337 5.2E-29 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS14085 fea968ce8cc9a8b693062bb8a54d1844 410 Gene3D G3DSA:3.40.50.300 1 209 1.5E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14085 fea968ce8cc9a8b693062bb8a54d1844 410 SUPERFAMILY SSF52540 73 354 2.9E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS10095 8ff21c8ab6cdd98d1ff5349aedfcf9e7 142 Pfam PF12098 Protein of unknown function (DUF3574) 45 130 5.9E-13 T 11-11-2016 IPR021957 Protein of unknown function DUF3574 S40542_RS04225 f98f2db63d75c5214078494bd79830a7 478 SUPERFAMILY SSF53720 7 477 2.88E-141 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 S40542_RS04225 f98f2db63d75c5214078494bd79830a7 478 Pfam PF00171 Aldehyde dehydrogenase family 23 473 2.5E-143 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 S40542_RS04225 f98f2db63d75c5214078494bd79830a7 478 Gene3D G3DSA:3.40.605.10 8 263 2.7E-83 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 S40542_RS04225 f98f2db63d75c5214078494bd79830a7 478 Gene3D G3DSA:3.40.309.10 264 449 3.3E-58 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 S40542_RS04225 f98f2db63d75c5214078494bd79830a7 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 S40542_RS04225 f98f2db63d75c5214078494bd79830a7 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 S40542_RS02705 33b295b370fe3867274e151897b06bab 211 Pfam PF09414 RNA ligase 35 184 1.8E-23 T 11-11-2016 IPR021122 RNA ligase domain, REL/Rln2 S40542_RS02705 33b295b370fe3867274e151897b06bab 211 SUPERFAMILY SSF56091 4 205 1.42E-35 T 11-11-2016 S40542_RS15585 92068756c0f227f6e96d6493d3103808 244 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 8.7E-99 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 S40542_RS15585 92068756c0f227f6e96d6493d3103808 244 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.2E-103 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 S40542_RS15585 92068756c0f227f6e96d6493d3103808 244 Gene3D G3DSA:3.20.20.70 3 242 6.0E-110 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS15585 92068756c0f227f6e96d6493d3103808 244 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 131.093 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 S40542_RS15585 92068756c0f227f6e96d6493d3103808 244 SUPERFAMILY SSF63892 4 242 5.23E-101 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 SUPERFAMILY SSF47240 1 154 5.19E-46 T 11-11-2016 IPR009078 Ferritin-like superfamily S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 Pfam PF00210 Ferritin-like domain 10 137 1.8E-34 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.4E-69 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 PRINTS PR00601 Bacterioferritin signature 3 22 1.6E-61 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 PRINTS PR00601 Bacterioferritin signature 23 43 1.6E-61 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 PRINTS PR00601 Bacterioferritin signature 44 64 1.6E-61 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 PRINTS PR00601 Bacterioferritin signature 86 106 1.6E-61 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 PRINTS PR00601 Bacterioferritin signature 128 149 1.6E-61 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 PRINTS PR00601 Bacterioferritin signature 65 85 1.6E-61 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 PRINTS PR00601 Bacterioferritin signature 107 127 1.6E-61 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 Gene3D G3DSA:1.20.1260.10 1 155 2.2E-55 T 11-11-2016 IPR012347 Ferritin-related S40542_RS08215 aafbc1c5026fb1776b2a91e30b910228 156 PIRSF PIRSF002560 1 156 7.7E-67 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 6.5E-32 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 Gene3D G3DSA:3.90.180.10 1 172 3.5E-50 T 11-11-2016 IPR011032 GroES-like S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.469 T 11-11-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 Pfam PF00107 Zinc-binding dehydrogenase 174 301 3.1E-27 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 SUPERFAMILY SSF51735 141 305 4.9E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 5.6E-176 T 11-11-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 Gene3D G3DSA:3.40.50.720 173 287 3.0E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 SMART SM00829 12 338 2.3E-5 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 S40542_RS04750 093605f797f038678d86a3a1ec10431a 342 SUPERFAMILY SSF50129 1 173 1.98E-53 T 11-11-2016 IPR011032 GroES-like S40542_RS19490 29080529e28493e46e41416f49d94b6b 142 SMART SM00342 30 87 0.0092 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS19490 29080529e28493e46e41416f49d94b6b 142 Gene3D G3DSA:1.10.10.60 10 60 8.2E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19490 29080529e28493e46e41416f49d94b6b 142 Gene3D G3DSA:1.10.10.60 61 95 1.3E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS19490 29080529e28493e46e41416f49d94b6b 142 SUPERFAMILY SSF46689 13 60 1.88E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS16250 a0c7b3796c0debc72cb31ceada7e65a6 174 SUPERFAMILY SSF46767 67 149 2.22E-32 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 S40542_RS16250 a0c7b3796c0debc72cb31ceada7e65a6 174 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 118 124 - T 11-11-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 S40542_RS16250 a0c7b3796c0debc72cb31ceada7e65a6 174 Gene3D G3DSA:1.10.10.10 66 149 3.1E-35 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS16250 a0c7b3796c0debc72cb31ceada7e65a6 174 SUPERFAMILY SSF53155 2 73 9.02E-18 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 S40542_RS16250 a0c7b3796c0debc72cb31ceada7e65a6 174 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 150 36.046 T 11-11-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 S40542_RS16250 a0c7b3796c0debc72cb31ceada7e65a6 174 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 69 148 2.3E-32 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 S40542_RS16250 a0c7b3796c0debc72cb31ceada7e65a6 174 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 68 147 2.5E-37 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 S40542_RS10960 574f4381a0e7c05eba2c38da33b41f3d 499 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 11-11-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 S40542_RS10960 574f4381a0e7c05eba2c38da33b41f3d 499 Gene3D G3DSA:1.10.275.10 5 196 1.4E-63 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal S40542_RS10960 574f4381a0e7c05eba2c38da33b41f3d 499 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 8 498 4.8E-178 T 11-11-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 S40542_RS10960 574f4381a0e7c05eba2c38da33b41f3d 499 Gene3D G3DSA:1.20.200.10 197 496 5.4E-114 T 11-11-2016 S40542_RS10960 574f4381a0e7c05eba2c38da33b41f3d 499 SUPERFAMILY SSF48557 6 495 1.02E-172 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 S40542_RS10960 574f4381a0e7c05eba2c38da33b41f3d 499 Pfam PF00221 Aromatic amino acid lyase 10 466 3.0E-176 T 11-11-2016 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 S40542_RS19635 9f561040b430acb9f8026e185fe55452 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 8 284 23.545 T 11-11-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial S40542_RS19635 9f561040b430acb9f8026e185fe55452 290 PIRSF PIRSF035875 7 290 1.0E-61 T 11-11-2016 IPR017039 Virulence factor BrkB S40542_RS19635 9f561040b430acb9f8026e185fe55452 290 Pfam PF03631 Virulence factor BrkB 32 279 1.1E-57 T 11-11-2016 IPR017039 Virulence factor BrkB S40542_RS19635 9f561040b430acb9f8026e185fe55452 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 279 3.1E-83 T 11-11-2016 IPR017039 Virulence factor BrkB S40542_RS05540 c422525262fb9b73b575839e5f10beb8 133 SMART SM00450 34 129 1.7E-22 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS05540 c422525262fb9b73b575839e5f10beb8 133 Pfam PF00581 Rhodanese-like domain 38 125 2.0E-16 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS05540 c422525262fb9b73b575839e5f10beb8 133 Gene3D G3DSA:3.40.250.10 40 132 3.0E-26 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS05540 c422525262fb9b73b575839e5f10beb8 133 SUPERFAMILY SSF52821 10 131 1.44E-28 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS21850 bbf5177723853e882e991b87629a604c 723 SMART SM00563 324 451 5.2E-24 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS21850 bbf5177723853e882e991b87629a604c 723 SUPERFAMILY SSF69593 305 512 3.53E-25 T 11-11-2016 S40542_RS21850 bbf5177723853e882e991b87629a604c 723 Pfam PF01553 Acyltransferase 306 448 2.5E-22 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS21850 bbf5177723853e882e991b87629a604c 723 PIRSF PIRSF000437 40 723 1.4E-230 T 11-11-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 S40542_RS21850 bbf5177723853e882e991b87629a604c 723 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 35 722 9.6E-292 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 S40542_RS21850 bbf5177723853e882e991b87629a604c 723 PIRSF PIRSF500064 22 723 1.2E-241 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 S40542_RS01120 79b68884e84f0dd7d29476724cdd6b74 282 Pfam PF13682 Chemoreceptor zinc-binding domain 85 147 9.4E-8 T 11-11-2016 IPR025991 Chemoreceptor zinc-binding domain S40542_RS01120 79b68884e84f0dd7d29476724cdd6b74 282 Pfam PF01584 CheW-like domain 184 264 1.7E-5 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01120 79b68884e84f0dd7d29476724cdd6b74 282 SUPERFAMILY SSF50341 2 72 1.44E-6 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01120 79b68884e84f0dd7d29476724cdd6b74 282 SUPERFAMILY SSF50341 183 265 1.29E-6 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS20505 b7c27e2623f695bf5ce48eabf95eb41d 95 Gene3D G3DSA:1.10.260.40 11 82 1.6E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS20505 b7c27e2623f695bf5ce48eabf95eb41d 95 Pfam PF01381 Helix-turn-helix 22 72 9.3E-13 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS20505 b7c27e2623f695bf5ce48eabf95eb41d 95 SUPERFAMILY SSF47413 9 77 1.23E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS20505 b7c27e2623f695bf5ce48eabf95eb41d 95 SMART SM00530 20 75 4.1E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS15990 3a74916e2b4f5b780230434d3ef12363 193 Pfam PF01713 Smr domain 96 177 9.6E-17 T 11-11-2016 IPR002625 Smr domain S40542_RS15990 3a74916e2b4f5b780230434d3ef12363 193 SUPERFAMILY SSF160443 94 177 5.36E-14 T 11-11-2016 IPR002625 Smr domain S40542_RS15990 3a74916e2b4f5b780230434d3ef12363 193 SMART SM00463 93 177 1.2E-12 T 11-11-2016 IPR002625 Smr domain S40542_RS11570 1d3b09a98b8636591ae778930c4ebd7c 176 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 176 32.898 T 11-11-2016 IPR009809 Cell division protein ZapC S40542_RS11570 1d3b09a98b8636591ae778930c4ebd7c 176 PIRSF PIRSF010252 1 176 2.7E-51 T 11-11-2016 IPR009809 Cell division protein ZapC S40542_RS11570 1d3b09a98b8636591ae778930c4ebd7c 176 Pfam PF07126 Cell-division protein ZapC 2 166 1.9E-45 T 11-11-2016 IPR009809 Cell division protein ZapC S40542_RS17900 b57ccfb2829900e9f30a797707957498 419 SUPERFAMILY SSF53474 230 369 4.05E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17900 b57ccfb2829900e9f30a797707957498 419 SUPERFAMILY SSF53474 113 163 4.05E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17900 b57ccfb2829900e9f30a797707957498 419 Gene3D G3DSA:3.40.50.1820 197 396 5.0E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17900 b57ccfb2829900e9f30a797707957498 419 Gene3D G3DSA:3.40.50.1820 112 157 5.0E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17900 b57ccfb2829900e9f30a797707957498 419 Gene3D G3DSA:3.40.50.1820 21 63 5.0E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17900 b57ccfb2829900e9f30a797707957498 419 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 53 170 1.2E-5 T 11-11-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 S40542_RS17900 b57ccfb2829900e9f30a797707957498 419 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 257 392 5.3E-12 T 11-11-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 S40542_RS04720 f64242c280625b35b2ae6bc5c4e6b6d9 197 Gene3D G3DSA:3.40.50.10490 7 189 2.9E-50 T 11-11-2016 S40542_RS04720 f64242c280625b35b2ae6bc5c4e6b6d9 197 Pfam PF13580 SIS domain 34 149 3.4E-21 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 S40542_RS04720 f64242c280625b35b2ae6bc5c4e6b6d9 197 SUPERFAMILY SSF53697 15 189 1.09E-44 T 11-11-2016 S40542_RS08885 6e12febe1848f5cfafc9a84081b89528 291 Gene3D G3DSA:3.40.190.10 90 165 1.6E-7 T 11-11-2016 S40542_RS08885 6e12febe1848f5cfafc9a84081b89528 291 Gene3D G3DSA:1.10.10.10 7 87 5.4E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08885 6e12febe1848f5cfafc9a84081b89528 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.9E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS08885 6e12febe1848f5cfafc9a84081b89528 291 SUPERFAMILY SSF53850 88 286 3.08E-35 T 11-11-2016 S40542_RS08885 6e12febe1848f5cfafc9a84081b89528 291 SUPERFAMILY SSF46785 7 110 1.09E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS08885 6e12febe1848f5cfafc9a84081b89528 291 Pfam PF03466 LysR substrate binding domain 91 285 2.8E-30 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS08885 6e12febe1848f5cfafc9a84081b89528 291 Gene3D G3DSA:3.40.190.10 166 252 6.2E-13 T 11-11-2016 S40542_RS06915 1e1a0e68efaec42807f92f60966aa17e 229 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-32 T 11-11-2016 S40542_RS06915 1e1a0e68efaec42807f92f60966aa17e 229 SMART SM00862 148 223 5.0E-23 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS06915 1e1a0e68efaec42807f92f60966aa17e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 4.2E-25 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS06915 1e1a0e68efaec42807f92f60966aa17e 229 SMART SM00448 1 112 5.6E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06915 1e1a0e68efaec42807f92f60966aa17e 229 SUPERFAMILY SSF52172 1 182 5.96E-33 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS06915 1e1a0e68efaec42807f92f60966aa17e 229 Pfam PF00072 Response regulator receiver domain 3 112 5.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06915 1e1a0e68efaec42807f92f60966aa17e 229 Gene3D G3DSA:1.10.10.10 126 226 3.7E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09130 d914b292fd4d0b7662c8d1063cd99a80 437 Pfam PF03553 Na+/H+ antiporter family 239 430 5.4E-5 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 S40542_RS09130 d914b292fd4d0b7662c8d1063cd99a80 437 Pfam PF03553 Na+/H+ antiporter family 15 218 1.7E-18 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 S40542_RS10430 09d956f974463a4cf58f67006d607347 412 Gene3D G3DSA:3.40.50.300 181 310 3.9E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS10430 09d956f974463a4cf58f67006d607347 412 SUPERFAMILY SSF52540 195 386 1.03E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS10430 09d956f974463a4cf58f67006d607347 412 Pfam PF13401 AAA domain 195 308 2.2E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 SUPERFAMILY SSF52172 1 107 1.11E-24 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 Pfam PF01339 CheB methylesterase 173 350 2.1E-60 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 356 37.87 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 Gene3D G3DSA:3.40.50.2300 1 108 5.3E-26 T 11-11-2016 S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 Gene3D G3DSA:3.40.50.180 169 356 2.2E-79 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 SUPERFAMILY SSF52738 171 355 5.89E-70 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 SMART SM00448 2 117 8.0E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 Pfam PF00072 Response regulator receiver domain 4 107 5.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09295 f0eb9463d0428559e11554f55ce9820c 357 PIRSF PIRSF000876 1 357 9.8E-125 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 S40542_RS02600 3da03059fa624142187e8f7ed1dad5c0 141 Pfam PF13279 Thioesterase-like superfamily 16 134 1.4E-25 T 11-11-2016 S40542_RS02600 3da03059fa624142187e8f7ed1dad5c0 141 Gene3D G3DSA:3.10.129.10 7 139 3.7E-41 T 11-11-2016 IPR029069 HotDog domain S40542_RS02600 3da03059fa624142187e8f7ed1dad5c0 141 SUPERFAMILY SSF54637 8 139 3.08E-35 T 11-11-2016 IPR029069 HotDog domain S40542_RS02600 3da03059fa624142187e8f7ed1dad5c0 141 PIRSF PIRSF003230 3 141 8.7E-21 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 S40542_RS12630 a540086c702bcd60b5066a293d183a4c 186 SUPERFAMILY SSF55729 7 172 2.7E-38 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12630 a540086c702bcd60b5066a293d183a4c 186 Gene3D G3DSA:3.40.630.30 7 171 8.3E-40 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12630 a540086c702bcd60b5066a293d183a4c 186 Pfam PF13302 Acetyltransferase (GNAT) domain 10 149 3.3E-23 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.4E-5 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.4E-5 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 5 188 4.7E-47 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.3E-30 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00097 Anthranilate synthase component II signature 126 138 3.3E-30 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00097 Anthranilate synthase component II signature 106 114 3.3E-30 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00097 Anthranilate synthase component II signature 5 19 3.3E-30 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.3E-30 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00097 Anthranilate synthase component II signature 168 181 3.3E-30 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 Gene3D G3DSA:3.40.50.880 3 190 1.2E-51 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 SUPERFAMILY SSF52317 4 191 1.12E-41 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 Pfam PF00117 Glutamine amidotransferase class-I 8 188 2.0E-40 T 11-11-2016 IPR017926 Glutamine amidotransferase S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 3.3E-13 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 3.3E-13 T 11-11-2016 S40542_RS14195 11876e6a9f960ac5cb172b7a50a452a7 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 3.3E-13 T 11-11-2016 S40542_RS18980 965ad96c765fc5e621bd7aac8b9f44d4 228 Gene3D G3DSA:3.10.450.50 130 186 6.0E-22 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS18980 965ad96c765fc5e621bd7aac8b9f44d4 228 Gene3D G3DSA:3.10.450.50 31 75 6.0E-22 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS18980 965ad96c765fc5e621bd7aac8b9f44d4 228 Gene3D G3DSA:1.10.10.640 187 216 4.2E-8 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical S40542_RS18980 965ad96c765fc5e621bd7aac8b9f44d4 228 Gene3D G3DSA:1.10.10.640 108 127 4.2E-8 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical S40542_RS18980 965ad96c765fc5e621bd7aac8b9f44d4 228 Pfam PF05494 MlaC protein 37 213 1.2E-47 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC S40542_RS18980 965ad96c765fc5e621bd7aac8b9f44d4 228 PIRSF PIRSF004649 3 225 6.7E-60 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC S40542_RS14655 e1b6d155235cb63bf4ff5cbaf3618192 177 PRINTS PR01021 OMPA domain signature 107 122 7.0E-16 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS14655 e1b6d155235cb63bf4ff5cbaf3618192 177 PRINTS PR01021 OMPA domain signature 77 99 7.0E-16 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS14655 e1b6d155235cb63bf4ff5cbaf3618192 177 PRINTS PR01021 OMPA domain signature 122 138 7.0E-16 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 S40542_RS14655 e1b6d155235cb63bf4ff5cbaf3618192 177 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 75 177 3.7E-43 T 11-11-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 S40542_RS14655 e1b6d155235cb63bf4ff5cbaf3618192 177 Gene3D G3DSA:3.30.1330.60 63 176 7.7E-33 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS14655 e1b6d155235cb63bf4ff5cbaf3618192 177 SUPERFAMILY SSF103088 61 176 1.83E-33 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS14655 e1b6d155235cb63bf4ff5cbaf3618192 177 Pfam PF00691 OmpA family 76 171 5.6E-21 T 11-11-2016 IPR006665 OmpA-like domain S40542_RS18205 1412c84b34a5501d36a3e9c5cbb60aa3 168 SUPERFAMILY SSF55021 2 68 1.15E-12 T 11-11-2016 S40542_RS18205 1412c84b34a5501d36a3e9c5cbb60aa3 168 PIRSF PIRSF028103 1 168 3.2E-37 T 11-11-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 S40542_RS18205 1412c84b34a5501d36a3e9c5cbb60aa3 168 Gene3D G3DSA:3.30.70.260 86 166 4.2E-16 T 11-11-2016 S40542_RS18205 1412c84b34a5501d36a3e9c5cbb60aa3 168 Pfam PF13740 ACT domain 3 66 1.5E-15 T 11-11-2016 S40542_RS18205 1412c84b34a5501d36a3e9c5cbb60aa3 168 SUPERFAMILY SSF55021 86 163 6.49E-10 T 11-11-2016 S40542_RS18205 1412c84b34a5501d36a3e9c5cbb60aa3 168 Gene3D G3DSA:3.30.70.260 1 73 7.4E-21 T 11-11-2016 S40542_RS09700 2ec30db9adf8507d6831e07520579b2b 67 PIRSF PIRSF037225 1 65 1.9E-25 T 11-11-2016 IPR017143 Uncharacterised conserved protein UCP037225 S40542_RS09700 2ec30db9adf8507d6831e07520579b2b 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 1.4E-22 T 11-11-2016 IPR025990 Cysteine-rich CPXCG protein S40542_RS06185 448fb49955288d86e44f8ca681c1c463 460 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 63 6.6E-10 T 11-11-2016 S40542_RS06185 448fb49955288d86e44f8ca681c1c463 460 Gene3D G3DSA:3.50.50.60 193 309 2.4E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS06185 448fb49955288d86e44f8ca681c1c463 460 Gene3D G3DSA:3.50.50.60 5 70 2.4E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS06185 448fb49955288d86e44f8ca681c1c463 460 SUPERFAMILY SSF51905 426 443 7.77E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS06185 448fb49955288d86e44f8ca681c1c463 460 SUPERFAMILY SSF51905 5 322 7.77E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 SUPERFAMILY SSF55979 246 367 2.36E-40 T 11-11-2016 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 PIRSF PIRSF000804 1 367 1.5E-122 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 Gene3D G3DSA:3.10.150.10 123 249 5.9E-36 T 11-11-2016 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 6.0E-36 T 11-11-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 SUPERFAMILY SSF55979 1 118 6.47E-28 T 11-11-2016 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 366 1.6E-41 T 11-11-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 1.6E-111 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 244 3.6E-33 T 11-11-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 SUPERFAMILY SSF55979 125 245 5.07E-28 T 11-11-2016 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 SMART SM00480 17 363 1.0E-148 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 Gene3D G3DSA:3.10.150.10 250 367 9.3E-41 T 11-11-2016 S40542_RS00010 76b1f3ebe3dbd73f61c820e5b798e21a 367 Gene3D G3DSA:3.10.150.10 1 122 5.1E-33 T 11-11-2016 S40542_RS11635 75fbe8c3df77919aef4d9a4cadbff38e 152 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 91 108 - T 11-11-2016 IPR000614 Free Met sulfoxide reductase conserved site S40542_RS11635 75fbe8c3df77919aef4d9a4cadbff38e 152 SUPERFAMILY SSF55781 3 146 6.28E-37 T 11-11-2016 IPR029016 GAF domain-like S40542_RS11635 75fbe8c3df77919aef4d9a4cadbff38e 152 Gene3D G3DSA:3.30.450.40 1 147 9.6E-48 T 11-11-2016 IPR029016 GAF domain-like S40542_RS11635 75fbe8c3df77919aef4d9a4cadbff38e 152 Pfam PF13185 GAF domain 42 138 1.0E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS17280 8bb8bb9ad6622d07274fe5f8b9f609bb 346 ProSitePatterns PS00483 Dihydroorotase signature 2. 247 258 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 S40542_RS17280 8bb8bb9ad6622d07274fe5f8b9f609bb 346 Pfam PF01979 Amidohydrolase family 14 315 1.5E-15 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS17280 8bb8bb9ad6622d07274fe5f8b9f609bb 346 PIRSF PIRSF001237 3 346 8.0E-147 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 S40542_RS17280 8bb8bb9ad6622d07274fe5f8b9f609bb 346 Hamap MF_00219 Dihydroorotase [pyrC]. 5 345 44.349 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 S40542_RS17280 8bb8bb9ad6622d07274fe5f8b9f609bb 346 SUPERFAMILY SSF51556 5 344 2.26E-150 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS17280 8bb8bb9ad6622d07274fe5f8b9f609bb 346 ProSitePatterns PS00482 Dihydroorotase signature 1. 14 22 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 S40542_RS17280 8bb8bb9ad6622d07274fe5f8b9f609bb 346 Gene3D G3DSA:3.20.20.140 4 344 1.9E-141 T 11-11-2016 S40542_RS17280 8bb8bb9ad6622d07274fe5f8b9f609bb 346 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 7 344 2.8E-142 T 11-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 S40542_RS08445 bfabb640e0f3640c3f521f87b424eac1 296 Gene3D G3DSA:1.10.10.60 248 291 1.3E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08445 bfabb640e0f3640c3f521f87b424eac1 296 Pfam PF12833 Helix-turn-helix domain 216 291 1.7E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS08445 bfabb640e0f3640c3f521f87b424eac1 296 Gene3D G3DSA:1.10.10.60 194 247 6.8E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08445 bfabb640e0f3640c3f521f87b424eac1 296 SUPERFAMILY SSF46689 247 291 1.66E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08445 bfabb640e0f3640c3f521f87b424eac1 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 1.5E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS08445 bfabb640e0f3640c3f521f87b424eac1 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 1.5E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS08445 bfabb640e0f3640c3f521f87b424eac1 296 SMART SM00342 210 293 7.8E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS08445 bfabb640e0f3640c3f521f87b424eac1 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 SUPERFAMILY SSF81593 282 431 7.85E-41 T 11-11-2016 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 26 931 17.505 T 11-11-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 Pfam PF08335 GlnD PII-uridylyltransferase 814 896 1.6E-6 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 Pfam PF08335 GlnD PII-uridylyltransferase 292 431 7.4E-39 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 540 790 4.1E-85 T 11-11-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 30 266 3.4E-69 T 11-11-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 Gene3D G3DSA:3.30.460.10 627 799 3.1E-56 T 11-11-2016 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 Gene3D G3DSA:3.30.460.10 113 280 5.2E-56 T 11-11-2016 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 SUPERFAMILY SSF81593 804 929 3.3E-24 T 11-11-2016 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 SUPERFAMILY SSF81301 18 281 8.83E-70 T 11-11-2016 S40542_RS04600 77209285f2c0a849a9e1fe3673d81262 931 SUPERFAMILY SSF81301 513 802 6.87E-82 T 11-11-2016 S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 Gene3D G3DSA:1.10.3430.10 11 390 1.0E-116 T 11-11-2016 IPR029020 Ammonium/urea transporter S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 Gene3D G3DSA:3.30.70.270 469 632 8.5E-50 T 11-11-2016 S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 Pfam PF00909 Ammonium Transporter Family 17 407 1.8E-114 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 SUPERFAMILY SSF111352 12 390 1.96E-107 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 627 4.0E-46 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 SMART SM00267 456 631 2.0E-58 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 465 630 1.6E-45 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 SUPERFAMILY SSF55073 472 632 8.63E-44 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS10155 2da1aff15446546e4a8b9eebdf20482e 635 TIGRFAM TIGR00836 amt: ammonium transporter 16 407 1.0E-120 T 11-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 S40542_RS18880 fb3cf43b6ca3b8be17e6a07003d8f246 624 Pfam PF04348 LppC putative lipoprotein 48 601 2.6E-83 T 11-11-2016 IPR007443 Penicillin-binding protein activator LpoA S40542_RS18880 fb3cf43b6ca3b8be17e6a07003d8f246 624 Gene3D G3DSA:3.40.50.2300 363 525 2.0E-42 T 11-11-2016 S40542_RS18880 fb3cf43b6ca3b8be17e6a07003d8f246 624 SUPERFAMILY SSF53822 450 607 6.47E-59 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS18880 fb3cf43b6ca3b8be17e6a07003d8f246 624 SUPERFAMILY SSF53822 258 422 6.47E-59 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS18880 fb3cf43b6ca3b8be17e6a07003d8f246 624 Gene3D G3DSA:3.40.50.2300 526 596 1.3E-38 T 11-11-2016 S40542_RS18880 fb3cf43b6ca3b8be17e6a07003d8f246 624 Gene3D G3DSA:3.40.50.2300 257 362 1.3E-38 T 11-11-2016 S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Gene3D G3DSA:1.10.486.10 383 537 1.1E-40 T 11-11-2016 S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Gene3D G3DSA:3.40.50.300 551 640 8.7E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Gene3D G3DSA:3.40.50.300 280 382 8.7E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.8E-78 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Gene3D G3DSA:3.40.50.300 183 279 9.8E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Gene3D G3DSA:3.40.50.300 2 105 9.8E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 SUPERFAMILY SSF52540 1 640 1.06E-164 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 40.209 T 11-11-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.1E-71 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 Gene3D G3DSA:1.10.10.160 108 181 1.4E-19 T 11-11-2016 IPR013986 DExx box DNA helicase domain S40542_RS01500 54a752d85a83b5886ec0d95939d09b6f 670 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 11-11-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 S40542_RS04915 d1285c6e8e7a65d5640e56194c3f2b63 613 SUPERFAMILY SSF58104 304 613 7.06E-63 T 11-11-2016 S40542_RS04915 d1285c6e8e7a65d5640e56194c3f2b63 613 SMART SM00283 351 612 3.3E-50 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS04915 d1285c6e8e7a65d5640e56194c3f2b63 613 Pfam PF00672 HAMP domain 266 330 3.3E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS04915 d1285c6e8e7a65d5640e56194c3f2b63 613 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 476 1.1E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS04915 d1285c6e8e7a65d5640e56194c3f2b63 613 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 478 507 1.1E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS04915 d1285c6e8e7a65d5640e56194c3f2b63 613 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 404 1.1E-20 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS04915 d1285c6e8e7a65d5640e56194c3f2b63 613 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 412 611 4.6E-42 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS04915 d1285c6e8e7a65d5640e56194c3f2b63 613 Gene3D G3DSA:1.10.287.950 366 582 1.9E-48 T 11-11-2016 S40542_RS10345 b0d968b04863efd059ca56fb121a14df 190 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 44 183 2.5E-29 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 S40542_RS10345 b0d968b04863efd059ca56fb121a14df 190 SUPERFAMILY SSF47240 2 190 1.18E-61 T 11-11-2016 IPR009078 Ferritin-like superfamily S40542_RS10345 b0d968b04863efd059ca56fb121a14df 190 Gene3D G3DSA:1.20.1260.10 3 190 5.7E-57 T 11-11-2016 IPR012347 Ferritin-related S40542_RS10345 b0d968b04863efd059ca56fb121a14df 190 PIRSF PIRSF020736 2 190 3.9E-44 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 S40542_RS09795 92fc77109ea1093de78243cd3a0676cc 636 SMART SM00306 454 552 2.0E-5 T 11-11-2016 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 S40542_RS09795 92fc77109ea1093de78243cd3a0676cc 636 SUPERFAMILY SSF51294 456 575 3.14E-11 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain S40542_RS09795 92fc77109ea1093de78243cd3a0676cc 636 Gene3D G3DSA:2.170.16.10 456 569 1.6E-8 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain S40542_RS03235 46a57bccbf9edec1d035f788fb9454ad 235 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 8.8E-96 T 11-11-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 S40542_RS03235 46a57bccbf9edec1d035f788fb9454ad 235 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 46.59 T 11-11-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 S40542_RS03235 46a57bccbf9edec1d035f788fb9454ad 235 Gene3D G3DSA:3.40.50.1580 1 231 1.2E-80 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 S40542_RS03235 46a57bccbf9edec1d035f788fb9454ad 235 Pfam PF01048 Phosphorylase superfamily 2 227 4.7E-48 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 S40542_RS03235 46a57bccbf9edec1d035f788fb9454ad 235 SUPERFAMILY SSF53167 1 230 1.44E-70 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 S40542_RS11665 81cfc0579229d4760a72ca44371a380b 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 216 1.1E-38 T 11-11-2016 S40542_RS18995 8536c417aad9cc7bd2cce7c5462c67ff 271 Gene3D G3DSA:3.40.50.300 8 238 5.3E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS18995 8536c417aad9cc7bd2cce7c5462c67ff 271 SMART SM00382 34 231 2.2E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS18995 8536c417aad9cc7bd2cce7c5462c67ff 271 Pfam PF00005 ABC transporter 25 174 9.0E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS18995 8536c417aad9cc7bd2cce7c5462c67ff 271 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS18995 8536c417aad9cc7bd2cce7c5462c67ff 271 SUPERFAMILY SSF52540 9 238 2.43E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05850 232c7b4440a54b122f32d2fd10357a07 155 Gene3D G3DSA:3.10.129.10 6 153 2.2E-53 T 11-11-2016 IPR029069 HotDog domain S40542_RS05850 232c7b4440a54b122f32d2fd10357a07 155 SUPERFAMILY SSF54637 16 153 1.71E-21 T 11-11-2016 IPR029069 HotDog domain S40542_RS05850 232c7b4440a54b122f32d2fd10357a07 155 Pfam PF14539 Domain of unknown function (DUF4442) 18 151 3.3E-50 T 11-11-2016 IPR027961 Protein of unknown function DUF4442 S40542_RS02830 bae41952cfa24a1c5ef8664c1ffca452 129 Gene3D G3DSA:3.40.30.10 52 127 1.5E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS02830 bae41952cfa24a1c5ef8664c1ffca452 129 ProSitePatterns PS00195 Glutaredoxin active site. 55 71 - T 11-11-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 S40542_RS02830 bae41952cfa24a1c5ef8664c1ffca452 129 Pfam PF00462 Glutaredoxin 53 107 1.9E-12 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 S40542_RS02830 bae41952cfa24a1c5ef8664c1ffca452 129 SUPERFAMILY SSF52833 52 122 2.29E-15 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS18365 3774d6a171dcd24a649cd5390b625e6f 262 Gene3D G3DSA:3.40.1160.10 6 261 2.0E-63 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS18365 3774d6a171dcd24a649cd5390b625e6f 262 Pfam PF00696 Amino acid kinase family 7 238 2.9E-30 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS18365 3774d6a171dcd24a649cd5390b625e6f 262 PIRSF PIRSF000728 1 262 3.6E-58 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 S40542_RS18365 3774d6a171dcd24a649cd5390b625e6f 262 SUPERFAMILY SSF53633 2 262 2.09E-52 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS00315 0025f855b314ccbd50e171adbc02f9b3 185 Pfam PF16357 Putative PepSY_TM-like 16 176 3.2E-10 T 11-11-2016 IPR032307 Putative PepSY TM-like protein S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 Gene3D G3DSA:3.30.390.30 334 461 1.1E-43 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 327 1.4E-65 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 SUPERFAMILY SSF51905 3 336 2.45E-57 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 Gene3D G3DSA:3.50.50.60 6 141 2.6E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 5.7E-71 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 457 8.8E-148 T 11-11-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 Gene3D G3DSA:3.50.50.60 142 333 8.8E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PIRSF PIRSF000350 1 467 3.4E-88 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 SUPERFAMILY SSF55424 342 465 2.58E-39 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 454 1.1E-35 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 2.4E-40 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-40 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.4E-40 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 2.4E-40 T 11-11-2016 S40542_RS02430 209d9f42abccc1aee2c1e83dd458a47f 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 2.4E-40 T 11-11-2016 S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 6.7E-13 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 6.7E-13 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.7E-13 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.3E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.3E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.3E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.3E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.3E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 Gene3D G3DSA:3.40.50.720 2 251 1.8E-74 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 SUPERFAMILY SSF51735 4 251 1.3E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 199 1.9E-4 T 11-11-2016 S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 3.8E-53 T 11-11-2016 S40542_RS13835 b605d021d3b87e3ff8a5fe885552c585 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS18320 19d930e535d0c1a43bdaf3b2849b76fc 298 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 144 9.8E-21 T 11-11-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 S40542_RS18320 19d930e535d0c1a43bdaf3b2849b76fc 298 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 297 1.5E-57 T 11-11-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 S40542_RS18320 19d930e535d0c1a43bdaf3b2849b76fc 298 Gene3D G3DSA:3.40.50.720 4 179 2.4E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18320 19d930e535d0c1a43bdaf3b2849b76fc 298 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 173 296 5.4E-29 T 11-11-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 S40542_RS18320 19d930e535d0c1a43bdaf3b2849b76fc 298 SUPERFAMILY SSF48179 173 296 1.22E-28 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 S40542_RS18320 19d930e535d0c1a43bdaf3b2849b76fc 298 Gene3D G3DSA:1.10.1040.10 180 297 3.6E-31 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 S40542_RS18320 19d930e535d0c1a43bdaf3b2849b76fc 298 SUPERFAMILY SSF51735 3 151 3.56E-23 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 Gene3D G3DSA:3.30.830.10 48 267 5.4E-49 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 SUPERFAMILY SSF63411 49 256 2.33E-45 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 Gene3D G3DSA:3.30.830.10 494 686 5.8E-25 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 Pfam PF00675 Insulinase (Peptidase family M16) 61 206 2.9E-27 T 11-11-2016 IPR011765 Peptidase M16, N-terminal S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 SUPERFAMILY SSF63411 278 458 5.83E-25 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 Pfam PF05193 Peptidase M16 inactive domain 225 393 1.0E-17 T 11-11-2016 IPR007863 Peptidase M16, C-terminal S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 Pfam PF05193 Peptidase M16 inactive domain 646 838 2.2E-5 T 11-11-2016 IPR007863 Peptidase M16, C-terminal S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 Gene3D G3DSA:3.30.830.10 711 910 1.1E-16 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 Gene3D G3DSA:3.30.830.10 288 454 2.8E-17 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 SUPERFAMILY SSF63411 708 914 6.5E-18 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS02310 7bc867d05caca0a2fa9580cce466f007 961 SUPERFAMILY SSF63411 491 679 2.1E-25 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 Gene3D G3DSA:3.20.20.300 48 401 5.9E-107 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 SUPERFAMILY SSF51445 47 429 1.01E-106 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 SUPERFAMILY SSF49785 719 821 1.62E-7 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 64 389 5.3E-79 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 Gene3D G3DSA:3.40.50.1700 416 642 8.9E-57 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 SUPERFAMILY SSF52279 430 644 1.29E-42 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 Gene3D G3DSA:2.60.120.360 715 813 7.3E-5 T 11-11-2016 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 PRINTS PR00133 Glycosyl hydrolase family 3 signature 200 216 1.4E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 PRINTS PR00133 Glycosyl hydrolase family 3 signature 311 329 1.4E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 PRINTS PR00133 Glycosyl hydrolase family 3 signature 130 146 1.4E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 PRINTS PR00133 Glycosyl hydrolase family 3 signature 241 257 1.4E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 PRINTS PR00133 Glycosyl hydrolase family 3 signature 154 173 1.4E-21 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 S40542_RS10030 1fd12d642440ec20b2acfbd1a6a53b1d 848 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 430 644 6.2E-31 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 Gene3D G3DSA:3.40.50.1100 104 192 8.6E-13 T 11-11-2016 S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 Gene3D G3DSA:3.40.50.1100 321 398 1.8E-15 T 11-11-2016 S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 Gene3D G3DSA:3.40.50.1100 193 316 4.9E-50 T 11-11-2016 S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 TIGRFAM TIGR00260 thrC: threonine synthase 56 395 2.4E-105 T 11-11-2016 IPR004450 Threonine synthase-like S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 Gene3D G3DSA:3.90.1380.10 1 82 1.6E-13 T 11-11-2016 IPR029144 Threonine synthase, N-terminal S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 91 364 1.1E-22 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 SUPERFAMILY SSF53686 9 426 4.58E-120 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 S40542_RS05455 90972d42fb64c172afad7ee014b73afb 427 Pfam PF14821 Threonine synthase N terminus 10 78 2.2E-7 T 11-11-2016 IPR029144 Threonine synthase, N-terminal S40542_RS19065 3042c89d534d8e4c138e6ea5c060af2b 174 Pfam PF04751 Protein of unknown function (DUF615) 17 169 5.7E-44 T 11-11-2016 IPR006839 Ribosome-associated, YjgA S40542_RS19065 3042c89d534d8e4c138e6ea5c060af2b 174 Gene3D G3DSA:1.10.60.30 27 103 5.9E-19 T 11-11-2016 IPR023153 PSPTO4464-like domain S40542_RS19065 3042c89d534d8e4c138e6ea5c060af2b 174 Gene3D G3DSA:1.10.60.30 107 172 8.0E-23 T 11-11-2016 IPR023153 PSPTO4464-like domain S40542_RS19065 3042c89d534d8e4c138e6ea5c060af2b 174 SUPERFAMILY SSF158710 27 172 1.83E-41 T 11-11-2016 S40542_RS19065 3042c89d534d8e4c138e6ea5c060af2b 174 PIRSF PIRSF016183 1 174 1.9E-50 T 11-11-2016 IPR006839 Ribosome-associated, YjgA S40542_RS06640 4d07b9af2fd3d6f7af9a0c5281fb1efe 288 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 243 269 - T 11-11-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 S40542_RS06640 4d07b9af2fd3d6f7af9a0c5281fb1efe 288 Pfam PF01148 Cytidylyltransferase family 3 283 6.3E-64 T 11-11-2016 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 Pfam PF00593 TonB dependent receptor 641 932 1.8E-23 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 39 933 1.8E-162 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 Gene3D G3DSA:2.170.130.10 57 161 1.9E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 161 2.7E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 Gene3D G3DSA:2.40.170.20 573 933 1.1E-54 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 Gene3D G3DSA:2.40.170.20 162 379 1.1E-54 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 Gene3D G3DSA:2.40.170.20 445 519 1.1E-54 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 SUPERFAMILY SSF56935 541 933 2.27E-73 T 11-11-2016 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 SUPERFAMILY SSF56935 443 505 2.27E-73 T 11-11-2016 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 SUPERFAMILY SSF56935 262 396 2.27E-73 T 11-11-2016 S40542_RS07060 b2fe6aa1eca65bb2490361d4ebba9a7b 933 SUPERFAMILY SSF56935 34 233 2.27E-73 T 11-11-2016 S40542_RS04220 64db8816a6b89721bfb946aa631d5e9f 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-11-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 S40542_RS04220 64db8816a6b89721bfb946aa631d5e9f 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 3.1E-15 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS04220 64db8816a6b89721bfb946aa631d5e9f 112 SUPERFAMILY SSF54292 4 103 1.03E-31 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS04220 64db8816a6b89721bfb946aa631d5e9f 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 6.6E-58 T 11-11-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 S40542_RS04220 64db8816a6b89721bfb946aa631d5e9f 112 Gene3D G3DSA:3.10.20.30 5 108 6.5E-35 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS04220 64db8816a6b89721bfb946aa631d5e9f 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.7E-10 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 S40542_RS04220 64db8816a6b89721bfb946aa631d5e9f 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.7E-10 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 S40542_RS04220 64db8816a6b89721bfb946aa631d5e9f 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.7E-10 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 S40542_RS00670 4f7b6f702afaf036109683aed68ebb16 265 SUPERFAMILY SSF54593 12 128 1.38E-20 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS00670 4f7b6f702afaf036109683aed68ebb16 265 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 124 2.5E-4 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS00670 4f7b6f702afaf036109683aed68ebb16 265 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 148 254 2.4E-4 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS00670 4f7b6f702afaf036109683aed68ebb16 265 SUPERFAMILY SSF54593 145 255 4.7E-22 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS00670 4f7b6f702afaf036109683aed68ebb16 265 Gene3D G3DSA:3.10.180.10 12 130 9.8E-31 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS00670 4f7b6f702afaf036109683aed68ebb16 265 Gene3D G3DSA:3.10.180.10 144 257 6.5E-35 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS15105 551189ca9bcabec1b332cf0c82a08030 160 Pfam PF13673 Acetyltransferase (GNAT) domain 24 136 9.8E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS15105 551189ca9bcabec1b332cf0c82a08030 160 Gene3D G3DSA:3.40.630.30 1 159 7.3E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15105 551189ca9bcabec1b332cf0c82a08030 160 SUPERFAMILY SSF55729 1 159 6.85E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS05790 d61bd6d39feee4dd4a268ad397eb95ee 132 Pfam PF04237 YjbR 12 110 3.0E-26 T 11-11-2016 IPR007351 Uncharacterised protein YjbR S40542_RS05790 d61bd6d39feee4dd4a268ad397eb95ee 132 SUPERFAMILY SSF142906 1 124 3.4E-38 T 11-11-2016 S40542_RS15945 cf672d022328e49c6400d52efeb45444 146 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 84 1.8E-10 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 S40542_RS15945 cf672d022328e49c6400d52efeb45444 146 SUPERFAMILY SSF54534 9 145 1.02E-32 T 11-11-2016 S40542_RS15945 cf672d022328e49c6400d52efeb45444 146 Gene3D G3DSA:3.10.50.40 9 73 4.3E-16 T 11-11-2016 S40542_RS15945 cf672d022328e49c6400d52efeb45444 146 Gene3D G3DSA:3.10.50.40 127 145 4.3E-16 T 11-11-2016 S40542_RS17025 7a35bf636102fdd9421f2b286bbae96b 262 SUPERFAMILY SSF47240 107 260 4.12E-69 T 11-11-2016 IPR009078 Ferritin-like superfamily S40542_RS17025 7a35bf636102fdd9421f2b286bbae96b 262 SUPERFAMILY SSF47240 9 59 4.12E-69 T 11-11-2016 IPR009078 Ferritin-like superfamily S40542_RS17025 7a35bf636102fdd9421f2b286bbae96b 262 PIRSF PIRSF020736 1 261 2.6E-86 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 S40542_RS17025 7a35bf636102fdd9421f2b286bbae96b 262 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 8 256 1.5E-101 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 S40542_RS17025 7a35bf636102fdd9421f2b286bbae96b 262 Gene3D G3DSA:1.20.1260.10 107 260 1.7E-84 T 11-11-2016 IPR012347 Ferritin-related S40542_RS17025 7a35bf636102fdd9421f2b286bbae96b 262 Gene3D G3DSA:1.20.1260.10 7 59 1.7E-84 T 11-11-2016 IPR012347 Ferritin-related S40542_RS11600 925efa81ce589eb1d5cff4b874de3389 705 Pfam PF06980 Protein of unknown function (DUF1302) 32 704 1.8E-191 T 11-11-2016 IPR010727 Protein of unknown function DUF1302 S40542_RS07285 93b5654beb1209dc329e07c13fc0b5e7 423 SUPERFAMILY SSF103473 15 405 1.22E-45 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS07285 93b5654beb1209dc329e07c13fc0b5e7 423 Pfam PF07690 Major Facilitator Superfamily 18 369 1.6E-35 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS07285 93b5654beb1209dc329e07c13fc0b5e7 423 Gene3D G3DSA:1.20.1250.20 220 410 3.5E-16 T 11-11-2016 S40542_RS07285 93b5654beb1209dc329e07c13fc0b5e7 423 Gene3D G3DSA:1.20.1250.20 16 196 8.9E-27 T 11-11-2016 S40542_RS06720 9b9c9395de64920f6ab33f82da5f499c 381 SUPERFAMILY SSF52151 9 282 9.16E-43 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 S40542_RS06720 9b9c9395de64920f6ab33f82da5f499c 381 Pfam PF01734 Patatin-like phospholipase 15 222 2.2E-18 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 S40542_RS06720 9b9c9395de64920f6ab33f82da5f499c 381 Gene3D G3DSA:3.40.1090.10 11 219 6.3E-12 T 11-11-2016 S40542_RS04780 915428f8d12d8701d65a21c10a19cd04 302 Gene3D G3DSA:3.40.190.10 86 191 3.1E-9 T 11-11-2016 S40542_RS04780 915428f8d12d8701d65a21c10a19cd04 302 SUPERFAMILY SSF46785 1 82 1.64E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04780 915428f8d12d8701d65a21c10a19cd04 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.9E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS04780 915428f8d12d8701d65a21c10a19cd04 302 Pfam PF03466 LysR substrate binding domain 90 286 3.6E-12 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS04780 915428f8d12d8701d65a21c10a19cd04 302 Gene3D G3DSA:1.10.10.10 1 84 9.4E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS04780 915428f8d12d8701d65a21c10a19cd04 302 SUPERFAMILY SSF53850 99 295 9.62E-11 T 11-11-2016 S40542_RS12715 a3700d31a6381e420f9eac73e3df4b96 308 Pfam PF07676 WD40-like Beta Propeller Repeat 257 280 0.014 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12715 a3700d31a6381e420f9eac73e3df4b96 308 Gene3D G3DSA:2.120.10.60 58 295 1.3E-6 T 11-11-2016 S40542_RS12715 a3700d31a6381e420f9eac73e3df4b96 308 SUPERFAMILY SSF82171 60 294 2.24E-9 T 11-11-2016 S40542_RS09490 23930fd1be4607d6605e1a4f483e1913 235 Gene3D G3DSA:3.40.50.300 5 223 1.5E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09490 23930fd1be4607d6605e1a4f483e1913 235 Pfam PF02224 Cytidylate kinase 8 223 2.0E-76 T 11-11-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 S40542_RS09490 23930fd1be4607d6605e1a4f483e1913 235 SUPERFAMILY SSF52540 6 224 2.41E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09490 23930fd1be4607d6605e1a4f483e1913 235 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 220 2.2E-82 T 11-11-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 S40542_RS09490 23930fd1be4607d6605e1a4f483e1913 235 Hamap MF_00238 Cytidylate kinase [cmk]. 6 226 34.059 T 11-11-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 S40542_RS16540 d50658f4510127f5206ae93098190ddf 343 PIRSF PIRSF020481 6 342 1.4E-100 T 11-11-2016 IPR014507 Baseplate assembly protein J, predicted S40542_RS16540 d50658f4510127f5206ae93098190ddf 343 Pfam PF04865 Baseplate J-like protein 117 300 1.3E-20 T 11-11-2016 IPR006949 Baseplate protein J-like S40542_RS09125 bff3ad0dd78d5a47d6cd5edf36e7011e 261 SUPERFAMILY SSF111364 24 261 7.06E-35 T 11-11-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 S40542_RS09125 bff3ad0dd78d5a47d6cd5edf36e7011e 261 ProSitePatterns PS00213 Lipocalin signature. 78 91 - T 11-11-2016 IPR022272 Lipocalin family conserved site S40542_RS09125 bff3ad0dd78d5a47d6cd5edf36e7011e 261 Gene3D G3DSA:2.40.230.20 18 250 2.7E-27 T 11-11-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 S40542_RS20545 c9583d890c0cd24be5c0417c627b322f 434 SUPERFAMILY SSF55874 279 433 6.29E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20545 c9583d890c0cd24be5c0417c627b322f 434 Gene3D G3DSA:3.30.565.10 289 431 1.3E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20545 c9583d890c0cd24be5c0417c627b322f 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 1.0E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20545 c9583d890c0cd24be5c0417c627b322f 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 1.0E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20545 c9583d890c0cd24be5c0417c627b322f 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 1.0E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS20545 c9583d890c0cd24be5c0417c627b322f 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 431 5.8E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20545 c9583d890c0cd24be5c0417c627b322f 434 SMART SM00387 327 434 6.2E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS04090 08e0eb82e5cbc5c710c6f8737f7d0ea2 296 Gene3D G3DSA:1.10.287.890 192 274 3.3E-33 T 11-11-2016 S40542_RS04090 08e0eb82e5cbc5c710c6f8737f7d0ea2 296 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 293 28.005 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 S40542_RS04090 08e0eb82e5cbc5c710c6f8737f7d0ea2 296 SUPERFAMILY SSF52540 1 150 1.83E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04090 08e0eb82e5cbc5c710c6f8737f7d0ea2 296 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 282 6.2E-106 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 S40542_RS04090 08e0eb82e5cbc5c710c6f8737f7d0ea2 296 Gene3D G3DSA:3.40.50.300 1 164 1.0E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04090 08e0eb82e5cbc5c710c6f8737f7d0ea2 296 Pfam PF01715 IPP transferase 31 276 4.2E-86 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 S40542_RS17325 15e8d7f2c0e705abdd3191984f5a8751 198 Pfam PF13505 Outer membrane protein beta-barrel domain 9 198 1.2E-19 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel S40542_RS17325 15e8d7f2c0e705abdd3191984f5a8751 198 Gene3D G3DSA:2.40.160.20 35 198 6.6E-22 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS17325 15e8d7f2c0e705abdd3191984f5a8751 198 SUPERFAMILY SSF56925 36 198 2.62E-24 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS11460 3538a83853730fde94e999b68b240b28 441 SUPERFAMILY SSF161070 5 439 4.84E-112 T 11-11-2016 S40542_RS11460 3538a83853730fde94e999b68b240b28 441 Pfam PF00209 Sodium:neurotransmitter symporter family 151 440 3.2E-28 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS11460 3538a83853730fde94e999b68b240b28 441 Pfam PF00209 Sodium:neurotransmitter symporter family 5 133 2.6E-21 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS11460 3538a83853730fde94e999b68b240b28 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 5.2E-10 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS11460 3538a83853730fde94e999b68b240b28 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 5.2E-10 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS11460 3538a83853730fde94e999b68b240b28 441 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 306 325 5.2E-10 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS00260 82ab6a12066d9c23ee3b79ffc237a9a6 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 251 8.7E-20 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS00260 82ab6a12066d9c23ee3b79ffc237a9a6 255 Gene3D G3DSA:3.40.190.10 212 251 8.2E-11 T 11-11-2016 S40542_RS00260 82ab6a12066d9c23ee3b79ffc237a9a6 255 Gene3D G3DSA:3.40.190.10 27 102 8.2E-11 T 11-11-2016 S40542_RS00260 82ab6a12066d9c23ee3b79ffc237a9a6 255 SUPERFAMILY SSF53850 30 251 7.39E-36 T 11-11-2016 S40542_RS00260 82ab6a12066d9c23ee3b79ffc237a9a6 255 Gene3D G3DSA:3.40.190.10 103 194 3.4E-4 T 11-11-2016 S40542_RS17965 c45060986a002d127f4d62a95dc6fe4b 425 Gene3D G3DSA:1.10.3210.10 179 326 4.8E-19 T 11-11-2016 IPR006674 HD domain S40542_RS17965 c45060986a002d127f4d62a95dc6fe4b 425 SUPERFAMILY SSF109604 170 343 1.3E-24 T 11-11-2016 S40542_RS17965 c45060986a002d127f4d62a95dc6fe4b 425 SMART SM00471 178 314 1.7E-4 T 11-11-2016 IPR003607 HD/PDEase domain S40542_RS17965 c45060986a002d127f4d62a95dc6fe4b 425 Pfam PF01966 HD domain 184 304 3.2E-12 T 11-11-2016 IPR006674 HD domain S40542_RS17965 c45060986a002d127f4d62a95dc6fe4b 425 Pfam PF11871 Domain of unknown function (DUF3391) 4 117 3.4E-9 T 11-11-2016 IPR021812 Protein of unknown function DUF3391 S40542_RS09570 3b50dc1f73afa90b889a64fc7f58d9cd 806 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 676 4.3E-39 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS09570 3b50dc1f73afa90b889a64fc7f58d9cd 806 SUPERFAMILY SSF58104 376 678 2.88E-58 T 11-11-2016 S40542_RS09570 3b50dc1f73afa90b889a64fc7f58d9cd 806 Pfam PF07238 PilZ domain 690 795 4.9E-9 T 11-11-2016 IPR009875 PilZ domain GO:0035438 S40542_RS09570 3b50dc1f73afa90b889a64fc7f58d9cd 806 SMART SM00283 416 677 2.0E-36 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS09570 3b50dc1f73afa90b889a64fc7f58d9cd 806 Gene3D G3DSA:2.40.10.220 692 793 6.2E-4 T 11-11-2016 S40542_RS09570 3b50dc1f73afa90b889a64fc7f58d9cd 806 Pfam PF00672 HAMP domain 327 396 1.3E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS09570 3b50dc1f73afa90b889a64fc7f58d9cd 806 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 176 2.5E-6 T 11-11-2016 IPR024478 4HB MCP domain S40542_RS09570 3b50dc1f73afa90b889a64fc7f58d9cd 806 Gene3D G3DSA:1.10.287.950 434 649 3.3E-43 T 11-11-2016 S40542_RS04950 f162ec141e6f93060b22d0aff5274e2e 459 Pfam PF07690 Major Facilitator Superfamily 26 354 2.6E-15 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS04950 f162ec141e6f93060b22d0aff5274e2e 459 Gene3D G3DSA:1.20.1250.20 262 447 7.0E-14 T 11-11-2016 S40542_RS04950 f162ec141e6f93060b22d0aff5274e2e 459 Gene3D G3DSA:1.20.1250.20 15 216 1.1E-18 T 11-11-2016 S40542_RS04950 f162ec141e6f93060b22d0aff5274e2e 459 SUPERFAMILY SSF103473 10 450 1.83E-32 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 Gene3D G3DSA:3.20.20.450 235 482 5.6E-80 T 11-11-2016 IPR001633 EAL domain S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 SMART SM00267 53 220 2.7E-23 T 11-11-2016 IPR000160 GGDEF domain S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 SMART SM00052 230 475 4.8E-80 T 11-11-2016 IPR001633 EAL domain S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 SUPERFAMILY SSF141868 236 483 3.01E-76 T 11-11-2016 IPR001633 EAL domain S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 SUPERFAMILY SSF55073 69 219 6.04E-30 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 63 218 8.6E-24 T 11-11-2016 IPR000160 GGDEF domain S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 Gene3D G3DSA:3.30.70.270 65 226 1.3E-32 T 11-11-2016 S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 Pfam PF00563 EAL domain 237 470 1.8E-64 T 11-11-2016 IPR001633 EAL domain S40542_RS14340 8f0b7b2c90610a64d4b5b32570598aff 493 Pfam PF00990 Diguanylate cyclase, GGDEF domain 64 215 4.6E-28 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 303 6.2E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 SUPERFAMILY SSF55073 145 303 1.18E-42 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 Gene3D G3DSA:3.40.50.2300 10 135 1.7E-33 T 11-11-2016 S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 SUPERFAMILY SSF52172 12 169 4.13E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 Gene3D G3DSA:3.30.70.270 142 304 8.8E-48 T 11-11-2016 S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 Pfam PF00072 Response regulator receiver domain 13 123 1.5E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 300 2.1E-44 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 SMART SM00448 11 123 3.4E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07990 722c98c452ca4586822f5795a5e899ad 306 SMART SM00267 129 304 6.8E-48 T 11-11-2016 IPR000160 GGDEF domain S40542_RS07420 fc832f49749726b43ba815a07c401b0e 223 SUPERFAMILY SSF52317 1 222 1.48E-55 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS07420 fc832f49749726b43ba815a07c401b0e 223 Gene3D G3DSA:3.40.50.880 1 222 2.8E-67 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS07420 fc832f49749726b43ba815a07c401b0e 223 Pfam PF01965 DJ-1/PfpI family 27 218 1.9E-12 T 11-11-2016 IPR002818 DJ-1/PfpI S40542_RS16200 f40d485c98f3dfe52e0ea9363068aa32 241 Gene3D G3DSA:3.40.50.1220 65 101 6.9E-22 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS16200 f40d485c98f3dfe52e0ea9363068aa32 241 Gene3D G3DSA:3.40.50.1220 4 18 6.9E-22 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS16200 f40d485c98f3dfe52e0ea9363068aa32 241 Gene3D G3DSA:3.40.50.1220 170 219 6.9E-22 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS16200 f40d485c98f3dfe52e0ea9363068aa32 241 SUPERFAMILY SSF52467 5 234 5.61E-45 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain S40542_RS16200 f40d485c98f3dfe52e0ea9363068aa32 241 Gene3D G3DSA:3.30.1600.10 19 60 8.4E-11 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain S40542_RS16200 f40d485c98f3dfe52e0ea9363068aa32 241 Gene3D G3DSA:3.30.1600.10 102 162 8.4E-11 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain S40542_RS16200 f40d485c98f3dfe52e0ea9363068aa32 241 Pfam PF02146 Sir2 family 8 192 9.9E-22 T 11-11-2016 IPR003000 Sirtuin family GO:0070403 S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 ProSitePatterns PS00042 Crp-type HTH domain signature. 190 213 - T 11-11-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 Gene3D G3DSA:1.10.10.10 165 239 2.3E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 Pfam PF00027 Cyclic nucleotide-binding domain 46 128 9.0E-14 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 SMART SM00419 182 230 8.0E-16 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 204 5.6E-12 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 204 219 5.6E-12 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 Gene3D G3DSA:2.60.120.10 14 164 4.6E-36 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 SUPERFAMILY SSF46785 161 239 3.03E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 SUPERFAMILY SSF51206 18 156 1.83E-28 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 SMART SM00100 25 146 2.2E-15 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS09170 aa58031c7e9de0c0fec0b7b36c120af0 242 Pfam PF13545 Crp-like helix-turn-helix domain 163 236 1.4E-17 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 S40542_RS06550 041a5181fd3c11baca434f8de4ae58ff 159 SUPERFAMILY SSF82093 30 142 2.62E-39 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 S40542_RS06550 041a5181fd3c11baca434f8de4ae58ff 159 Pfam PF03100 CcmE 4 136 1.9E-43 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 S40542_RS06550 041a5181fd3c11baca434f8de4ae58ff 159 Gene3D G3DSA:2.40.50.140 27 131 2.4E-38 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS06550 041a5181fd3c11baca434f8de4ae58ff 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.193 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 S40542_RS18540 e2a1d35bbcc61d293673de7786b2d0cb 373 Gene3D G3DSA:3.40.640.10 24 252 3.7E-69 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS18540 e2a1d35bbcc61d293673de7786b2d0cb 373 Gene3D G3DSA:3.90.1150.10 256 372 7.6E-17 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS18540 e2a1d35bbcc61d293673de7786b2d0cb 373 SUPERFAMILY SSF53383 13 372 8.57E-86 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS18540 e2a1d35bbcc61d293673de7786b2d0cb 373 PIRSF PIRSF000390 9 373 5.1E-90 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase S40542_RS18540 e2a1d35bbcc61d293673de7786b2d0cb 373 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 24 368 6.8E-89 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase S40542_RS09335 ced4c81cea97698ae5e1e1084c39dd89 378 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 135 328 3.3E-29 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS09335 ced4c81cea97698ae5e1e1084c39dd89 378 SMART SM00283 81 299 9.9E-14 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS09335 ced4c81cea97698ae5e1e1084c39dd89 378 Gene3D G3DSA:1.10.287.950 94 298 8.8E-39 T 11-11-2016 S40542_RS09335 ced4c81cea97698ae5e1e1084c39dd89 378 SUPERFAMILY SSF58104 87 299 2.22E-39 T 11-11-2016 S40542_RS02920 b7d1ec1427893287cd75200ebe8f4923 76 SUPERFAMILY SSF47413 10 73 8.45E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS02920 b7d1ec1427893287cd75200ebe8f4923 76 Gene3D G3DSA:1.10.260.40 11 73 5.6E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS21955 a7743e2e88bfa449aedb4eb888c71c64 168 Gene3D G3DSA:3.40.50.300 38 125 1.0E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS21955 a7743e2e88bfa449aedb4eb888c71c64 168 Pfam PF07724 AAA domain (Cdc48 subfamily) 5 123 2.4E-40 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS21955 a7743e2e88bfa449aedb4eb888c71c64 168 SUPERFAMILY SSF52540 4 168 3.29E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS21955 a7743e2e88bfa449aedb4eb888c71c64 168 Gene3D G3DSA:1.10.8.60 129 168 2.9E-11 T 11-11-2016 S40542_RS21955 a7743e2e88bfa449aedb4eb888c71c64 168 Gene3D G3DSA:1.10.8.10 11 37 1.9E-10 T 11-11-2016 S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 Pfam PF00765 Autoinducer synthase 10 191 1.5E-34 T 11-11-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 PRINTS PR01549 Autoinducer synthesis protein signature 68 86 2.0E-26 T 11-11-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 PRINTS PR01549 Autoinducer synthesis protein signature 126 147 2.0E-26 T 11-11-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 PRINTS PR01549 Autoinducer synthesis protein signature 101 113 2.0E-26 T 11-11-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 PRINTS PR01549 Autoinducer synthesis protein signature 20 39 2.0E-26 T 11-11-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 PRINTS PR01549 Autoinducer synthesis protein signature 148 169 2.0E-26 T 11-11-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 PRINTS PR01549 Autoinducer synthesis protein signature 172 189 2.0E-26 T 11-11-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 Gene3D G3DSA:3.40.630.30 7 198 3.3E-57 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS18860 6cd134ccf8912f0c3d805c23cb227bea 202 SUPERFAMILY SSF55729 10 197 3.05E-35 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS11730 97e9714e67270ec5dcd5a9e7525f6875 297 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 8 269 56.173 T 11-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 S40542_RS11730 97e9714e67270ec5dcd5a9e7525f6875 297 Pfam PF01171 PP-loop family 41 203 4.7E-16 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 S40542_RS11730 97e9714e67270ec5dcd5a9e7525f6875 297 SUPERFAMILY SSF52402 15 233 1.09E-53 T 11-11-2016 S40542_RS11730 97e9714e67270ec5dcd5a9e7525f6875 297 PIRSF PIRSF004976 2 282 3.6E-70 T 11-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 S40542_RS11730 97e9714e67270ec5dcd5a9e7525f6875 297 Gene3D G3DSA:3.40.50.620 20 205 1.9E-22 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS04625 4a9cb07863bb8242776bf8d3698afbf7 145 Pfam PF06853 Protein of unknown function (DUF1249) 24 133 4.6E-33 T 11-11-2016 IPR009659 Protein of unknown function DUF1249 S40542_RS06820 18965ba4ea0bc554e516b1c7c7840518 402 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 210 2.4E-58 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain S40542_RS06820 18965ba4ea0bc554e516b1c7c7840518 402 Gene3D G3DSA:3.40.50.300 7 231 2.6E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06820 18965ba4ea0bc554e516b1c7c7840518 402 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 259 376 2.3E-28 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal S40542_RS06820 18965ba4ea0bc554e516b1c7c7840518 402 SUPERFAMILY SSF52540 5 308 9.88E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06820 18965ba4ea0bc554e516b1c7c7840518 402 Gene3D G3DSA:3.30.1220.10 246 376 4.2E-16 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal S40542_RS06820 18965ba4ea0bc554e516b1c7c7840518 402 SMART SM00833 259 376 5.6E-50 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal S40542_RS14400 1b5a724258896e52a34d61e9aebccac9 254 SUPERFAMILY SSF56752 2 250 1.7E-61 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 S40542_RS14400 1b5a724258896e52a34d61e9aebccac9 254 Gene3D G3DSA:3.20.10.10 115 243 1.5E-32 T 11-11-2016 S40542_RS14400 1b5a724258896e52a34d61e9aebccac9 254 Pfam PF01063 Amino-transferase class IV 15 233 1.4E-42 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 S40542_RS14400 1b5a724258896e52a34d61e9aebccac9 254 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 2 245 1.7E-87 T 11-11-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 S40542_RS14400 1b5a724258896e52a34d61e9aebccac9 254 Gene3D G3DSA:3.30.470.10 3 96 9.0E-24 T 11-11-2016 S40542_RS07005 fe395be96fa576b503b59e7dbb3eea43 649 Gene3D G3DSA:3.60.21.10 139 389 8.3E-20 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS07005 fe395be96fa576b503b59e7dbb3eea43 649 Gene3D G3DSA:2.60.40.380 31 114 4.0E-5 T 11-11-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 S40542_RS07005 fe395be96fa576b503b59e7dbb3eea43 649 SUPERFAMILY SSF49363 22 113 1.57E-9 T 11-11-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 S40542_RS07005 fe395be96fa576b503b59e7dbb3eea43 649 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 464 530 1.9E-14 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial S40542_RS07005 fe395be96fa576b503b59e7dbb3eea43 649 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 571 635 4.8E-16 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial S40542_RS07005 fe395be96fa576b503b59e7dbb3eea43 649 Gene3D G3DSA:2.60.120.380 445 535 1.5E-4 T 11-11-2016 S40542_RS07005 fe395be96fa576b503b59e7dbb3eea43 649 SUPERFAMILY SSF56300 126 391 1.59E-20 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS07005 fe395be96fa576b503b59e7dbb3eea43 649 Pfam PF00149 Calcineurin-like phosphoesterase 146 293 4.2E-7 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 S40542_RS13885 36ba538f87ffd39e428be2bacdec7b6f 260 SUPERFAMILY SSF52096 3 257 5.57E-65 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13885 36ba538f87ffd39e428be2bacdec7b6f 260 Gene3D G3DSA:1.10.12.10 200 255 1.2E-10 T 11-11-2016 IPR014748 Crontonase, C-terminal S40542_RS13885 36ba538f87ffd39e428be2bacdec7b6f 260 Gene3D G3DSA:3.90.226.10 4 188 5.6E-51 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS13885 36ba538f87ffd39e428be2bacdec7b6f 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 255 7.1E-48 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 532 2.3E-44 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 Gene3D G3DSA:1.10.287.950 287 503 1.0E-52 T 11-11-2016 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 SUPERFAMILY SSF58104 225 534 3.79E-71 T 11-11-2016 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 8.0E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 397 8.0E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 8.0E-21 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 Pfam PF00672 HAMP domain 187 251 2.8E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 SMART SM00304 204 257 2.3E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS00130 cca35d1ace172f8fde8071b49dc6f50d 535 SMART SM00283 272 533 1.2E-68 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS03730 2a3d23bc1aa0a29265fe369787f00058 195 Gene3D G3DSA:2.60.120.10 18 160 2.8E-22 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS03730 2a3d23bc1aa0a29265fe369787f00058 195 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 4.9E-10 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS03730 2a3d23bc1aa0a29265fe369787f00058 195 SUPERFAMILY SSF51206 25 147 4.06E-22 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS19620 5631b4e9210a69319c74673162f73780 231 SUPERFAMILY SSF53335 13 222 2.32E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS19620 5631b4e9210a69319c74673162f73780 231 Gene3D G3DSA:3.40.50.150 36 200 8.8E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03270 d17dcf234f38e9d19876b84c9f1028ce 345 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 273 279 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS03270 d17dcf234f38e9d19876b84c9f1028ce 345 SUPERFAMILY SSF53335 178 330 2.31E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03270 d17dcf234f38e9d19876b84c9f1028ce 345 Pfam PF05175 Methyltransferase small domain 178 341 1.1E-49 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 S40542_RS03270 d17dcf234f38e9d19876b84c9f1028ce 345 Gene3D G3DSA:3.40.50.150 179 329 2.2E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03270 d17dcf234f38e9d19876b84c9f1028ce 345 Pfam PF08468 Methyltransferase small domain N-terminal 8 164 4.8E-38 T 11-11-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS03270 d17dcf234f38e9d19876b84c9f1028ce 345 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 344 41.279 T 11-11-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS05550 8822f2dbda270d1fbc49bb3083a59248 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 1.2E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS05550 8822f2dbda270d1fbc49bb3083a59248 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.1E-5 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS05550 8822f2dbda270d1fbc49bb3083a59248 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.1E-5 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS05550 8822f2dbda270d1fbc49bb3083a59248 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site S40542_RS05550 8822f2dbda270d1fbc49bb3083a59248 193 SUPERFAMILY SSF48498 78 188 1.37E-17 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal S40542_RS05550 8822f2dbda270d1fbc49bb3083a59248 193 Gene3D G3DSA:1.10.10.60 2 55 2.4E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS05550 8822f2dbda270d1fbc49bb3083a59248 193 Gene3D G3DSA:1.10.357.10 56 179 7.3E-16 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS05550 8822f2dbda270d1fbc49bb3083a59248 193 SUPERFAMILY SSF46689 3 72 9.75E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS05525 9e2c623f6da938459d3a9e8fd2f4e962 589 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 99 270 1.9E-67 T 11-11-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 S40542_RS05525 9e2c623f6da938459d3a9e8fd2f4e962 589 Pfam PF00561 alpha/beta hydrolase fold 272 511 2.4E-10 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS05525 9e2c623f6da938459d3a9e8fd2f4e962 589 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 56 586 2.8E-229 T 11-11-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 S40542_RS05525 9e2c623f6da938459d3a9e8fd2f4e962 589 Gene3D G3DSA:3.40.50.1820 215 556 9.6E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS05525 9e2c623f6da938459d3a9e8fd2f4e962 589 SUPERFAMILY SSF53474 228 517 2.57E-31 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS04200 1588fd88576bd7b33b97b8c053bef38f 127 Pfam PF01592 NifU-like N terminal domain 2 126 3.1E-56 T 11-11-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 S40542_RS04200 1588fd88576bd7b33b97b8c053bef38f 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.4E-68 T 11-11-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 S40542_RS04200 1588fd88576bd7b33b97b8c053bef38f 127 SUPERFAMILY SSF82649 1 125 4.19E-49 T 11-11-2016 S40542_RS04200 1588fd88576bd7b33b97b8c053bef38f 127 Gene3D G3DSA:3.90.1010.10 2 126 1.6E-55 T 11-11-2016 S40542_RS11860 b650041b74609e427a3436ad144536d5 133 SUPERFAMILY SSF160719 32 130 7.85E-24 T 11-11-2016 S40542_RS11860 b650041b74609e427a3436ad144536d5 133 Gene3D G3DSA:3.10.450.40 1 130 9.2E-31 T 11-11-2016 S40542_RS11860 b650041b74609e427a3436ad144536d5 133 Pfam PF04965 Gene 25-like lysozyme 29 117 9.6E-13 T 11-11-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD S40542_RS03805 dfd9e138fc150f77c686d24135d4aca3 384 Pfam PF00072 Response regulator receiver domain 5 116 6.7E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03805 dfd9e138fc150f77c686d24135d4aca3 384 SMART SM00448 3 115 1.8E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS03805 dfd9e138fc150f77c686d24135d4aca3 384 SUPERFAMILY SSF52172 4 131 2.28E-35 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS03805 dfd9e138fc150f77c686d24135d4aca3 384 Gene3D G3DSA:3.40.50.2300 5 125 2.6E-37 T 11-11-2016 S40542_RS09810 7a635616ae2fdc2828aa86666371bff2 115 Gene3D G3DSA:3.10.180.10 4 112 6.0E-16 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS09810 7a635616ae2fdc2828aa86666371bff2 115 SUPERFAMILY SSF54593 7 112 1.72E-15 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS07265 833813715ae07e9c33cc58d8c708261d 706 Gene3D G3DSA:2.170.130.10 23 160 7.0E-28 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07265 833813715ae07e9c33cc58d8c708261d 706 Gene3D G3DSA:2.40.170.20 165 706 3.8E-131 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07265 833813715ae07e9c33cc58d8c708261d 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 149 4.1E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07265 833813715ae07e9c33cc58d8c708261d 706 SUPERFAMILY SSF56935 22 706 1.28E-123 T 11-11-2016 S40542_RS07265 833813715ae07e9c33cc58d8c708261d 706 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 49 706 1.3E-86 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 S40542_RS07265 833813715ae07e9c33cc58d8c708261d 706 Pfam PF00593 TonB dependent receptor 467 705 1.8E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10865 4ca8ea28aa20d4f0f5bc48bfe4a324b1 210 SUPERFAMILY SSF53271 3 207 2.23E-65 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS10865 4ca8ea28aa20d4f0f5bc48bfe4a324b1 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 209 43.364 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 S40542_RS10865 4ca8ea28aa20d4f0f5bc48bfe4a324b1 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 4.1E-85 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 S40542_RS10865 4ca8ea28aa20d4f0f5bc48bfe4a324b1 210 Gene3D G3DSA:3.40.50.2020 3 209 1.7E-75 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS10865 4ca8ea28aa20d4f0f5bc48bfe4a324b1 210 Pfam PF14681 Uracil phosphoribosyltransferase 5 208 4.0E-67 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS10765 a4250475b50d069868b15733854e647b 270 SUPERFAMILY SSF55729 121 265 3.16E-6 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS10765 a4250475b50d069868b15733854e647b 270 Gene3D G3DSA:3.40.630.30 120 266 7.0E-6 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS03205 8c15c13afdf4356b542c04381178c91c 832 Pfam PF07238 PilZ domain 493 573 9.6E-6 T 11-11-2016 IPR009875 PilZ domain GO:0035438 S40542_RS03205 8c15c13afdf4356b542c04381178c91c 832 Pfam PF07238 PilZ domain 148 232 9.7E-5 T 11-11-2016 IPR009875 PilZ domain GO:0035438 S40542_RS14980 e9b994835f84ba3c90832a8e134aa071 151 Gene3D G3DSA:1.25.40.10 40 122 5.5E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14980 e9b994835f84ba3c90832a8e134aa071 151 SUPERFAMILY SSF81901 41 113 5.75E-13 T 11-11-2016 S40542_RS14980 e9b994835f84ba3c90832a8e134aa071 151 SMART SM00671 73 108 0.016 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS14980 e9b994835f84ba3c90832a8e134aa071 151 SMART SM00671 41 72 48.0 T 11-11-2016 IPR006597 Sel1-like repeat S40542_RS14275 6a4c71ee67595e53e774022a70348f49 677 SUPERFAMILY SSF141868 431 669 1.06E-54 T 11-11-2016 IPR001633 EAL domain S40542_RS14275 6a4c71ee67595e53e774022a70348f49 677 Gene3D G3DSA:3.20.20.450 433 666 2.7E-56 T 11-11-2016 IPR001633 EAL domain S40542_RS14275 6a4c71ee67595e53e774022a70348f49 677 SMART SM00052 421 664 4.6E-46 T 11-11-2016 IPR001633 EAL domain S40542_RS14275 6a4c71ee67595e53e774022a70348f49 677 Pfam PF00563 EAL domain 431 658 1.9E-48 T 11-11-2016 IPR001633 EAL domain S40542_RS14275 6a4c71ee67595e53e774022a70348f49 677 Pfam PF02378 Phosphotransferase system, EIIC 23 320 7.2E-9 T 11-11-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 S40542_RS07415 442e010e93857ef21dd505c41b8ef930 291 SUPERFAMILY SSF53850 90 290 3.26E-42 T 11-11-2016 S40542_RS07415 442e010e93857ef21dd505c41b8ef930 291 Gene3D G3DSA:3.40.190.10 92 177 1.2E-25 T 11-11-2016 S40542_RS07415 442e010e93857ef21dd505c41b8ef930 291 SUPERFAMILY SSF46785 7 85 3.54E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS07415 442e010e93857ef21dd505c41b8ef930 291 Gene3D G3DSA:1.10.10.10 9 85 1.3E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS07415 442e010e93857ef21dd505c41b8ef930 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 62 3.4E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS07415 442e010e93857ef21dd505c41b8ef930 291 Gene3D G3DSA:3.40.190.10 178 254 1.2E-15 T 11-11-2016 S40542_RS07415 442e010e93857ef21dd505c41b8ef930 291 Pfam PF03466 LysR substrate binding domain 90 288 5.8E-39 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS14985 dd79b367f31e1054ca67755901ef88ce 141 Gene3D G3DSA:3.40.50.300 24 114 3.4E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS14985 dd79b367f31e1054ca67755901ef88ce 141 Pfam PF03846 Cell division inhibitor SulA 24 104 2.8E-9 T 11-11-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 S40542_RS14985 dd79b367f31e1054ca67755901ef88ce 141 SUPERFAMILY SSF52540 32 113 1.01E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08895 c6b2e4ca4ce760db9efdc4cc5d677b13 162 Gene3D G3DSA:3.90.190.10 16 162 1.1E-23 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like S40542_RS08895 c6b2e4ca4ce760db9efdc4cc5d677b13 162 SUPERFAMILY SSF52799 17 161 6.29E-20 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like S40542_RS16745 60acbb884a8b86999a33ad68e1a7630f 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 20.501 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 S40542_RS16745 60acbb884a8b86999a33ad68e1a7630f 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 S40542_RS16745 60acbb884a8b86999a33ad68e1a7630f 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 262 2.2E-91 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 S40542_RS16745 60acbb884a8b86999a33ad68e1a7630f 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 256 2.5E-83 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 S40542_RS20080 8ff2f03379ee5419a6cdc689cd3f8ba2 491 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.4E-172 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 S40542_RS20080 8ff2f03379ee5419a6cdc689cd3f8ba2 491 Gene3D G3DSA:3.40.1670.10 337 454 7.3E-56 T 11-11-2016 S40542_RS20080 8ff2f03379ee5419a6cdc689cd3f8ba2 491 SUPERFAMILY SSF50475 3 322 2.55E-126 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS20080 8ff2f03379ee5419a6cdc689cd3f8ba2 491 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 6.3E-180 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 S40542_RS20080 8ff2f03379ee5419a6cdc689cd3f8ba2 491 SUPERFAMILY SSF143968 323 486 3.53E-68 T 11-11-2016 S40542_RS20080 8ff2f03379ee5419a6cdc689cd3f8ba2 491 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.81 T 11-11-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 S40542_RS20080 8ff2f03379ee5419a6cdc689cd3f8ba2 491 Gene3D G3DSA:1.20.5.570 455 489 6.0E-18 T 11-11-2016 S40542_RS03520 ec05f1ee40a981f7cfc99173fe9ab4e2 255 PIRSF PIRSF006648 5 252 1.4E-24 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS03520 ec05f1ee40a981f7cfc99173fe9ab4e2 255 Pfam PF01061 ABC-2 type transporter 8 217 3.2E-36 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 S40542_RS03520 ec05f1ee40a981f7cfc99173fe9ab4e2 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 101 126 5.0E-11 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS03520 ec05f1ee40a981f7cfc99173fe9ab4e2 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 5.0E-11 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS03520 ec05f1ee40a981f7cfc99173fe9ab4e2 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 137 161 5.0E-11 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS03520 ec05f1ee40a981f7cfc99173fe9ab4e2 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 175 194 5.0E-11 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS03520 ec05f1ee40a981f7cfc99173fe9ab4e2 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 57 79 5.0E-11 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS01830 ea4200dd48a46bc065ef922ed456a765 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 2.3E-59 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 S40542_RS01830 ea4200dd48a46bc065ef922ed456a765 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS01830 ea4200dd48a46bc065ef922ed456a765 153 Gene3D G3DSA:2.40.50.100 77 153 1.2E-31 T 11-11-2016 S40542_RS01830 ea4200dd48a46bc065ef922ed456a765 153 SUPERFAMILY SSF51230 78 153 2.88E-25 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS01830 ea4200dd48a46bc065ef922ed456a765 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 9.4E-16 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 S40542_RS01830 ea4200dd48a46bc065ef922ed456a765 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 9.4E-16 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 S40542_RS01830 ea4200dd48a46bc065ef922ed456a765 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 9.4E-16 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 S40542_RS01830 ea4200dd48a46bc065ef922ed456a765 153 Pfam PF00364 Biotin-requiring enzyme 78 152 2.7E-25 T 11-11-2016 IPR000089 Biotin/lipoyl attachment S40542_RS03605 63c93fa94c123a97f86975fb26092768 322 Gene3D G3DSA:3.40.190.10 44 119 4.1E-7 T 11-11-2016 S40542_RS03605 63c93fa94c123a97f86975fb26092768 322 Gene3D G3DSA:3.40.190.10 265 315 4.1E-7 T 11-11-2016 S40542_RS03605 63c93fa94c123a97f86975fb26092768 322 Pfam PF12849 PBP superfamily domain 37 293 2.3E-31 T 11-11-2016 IPR024370 PBP domain S40542_RS03605 63c93fa94c123a97f86975fb26092768 322 Gene3D G3DSA:3.40.190.10 122 264 3.9E-38 T 11-11-2016 S40542_RS03605 63c93fa94c123a97f86975fb26092768 322 SUPERFAMILY SSF53850 36 318 1.17E-73 T 11-11-2016 S40542_RS03605 63c93fa94c123a97f86975fb26092768 322 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 7 307 7.3E-86 T 11-11-2016 IPR011862 Phosphate binding protein GO:0006810 S40542_RS06560 7492283e3a5b5f0af20c0883fc789be2 189 Pfam PF08534 Redoxin 38 174 1.1E-14 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 S40542_RS06560 7492283e3a5b5f0af20c0883fc789be2 189 SUPERFAMILY SSF52833 36 189 1.57E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS06560 7492283e3a5b5f0af20c0883fc789be2 189 Gene3D G3DSA:3.40.30.10 11 187 1.9E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS06560 7492283e3a5b5f0af20c0883fc789be2 189 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 11 186 1.6E-36 T 11-11-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 Gene3D G3DSA:3.50.50.60 269 355 8.6E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 Gene3D G3DSA:3.50.50.60 3 183 8.6E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-11-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 SUPERFAMILY SSF51905 268 382 3.03E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 SUPERFAMILY SSF51905 3 178 3.03E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.5E-15 T 11-11-2016 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.5E-15 T 11-11-2016 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.5E-15 T 11-11-2016 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.5E-15 T 11-11-2016 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 Pfam PF01494 FAD binding domain 4 318 8.7E-23 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 389 5.9E-111 T 11-11-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 S40542_RS02555 f4bd0b3b4345f939aa3426392d0f14fb 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 389 9.2E-125 T 11-11-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 S40542_RS04330 4277a02fb4c450003ba3fa4fe9320e2b 394 Pfam PF05762 VWA domain containing CoxE-like protein 188 277 6.7E-11 T 11-11-2016 IPR008912 Uncharacterised protein family CoxE-like S40542_RS25690 539c883d8a2b46002b520bbc0cb8e7e0 369 Pfam PF04453 Organic solvent tolerance protein 190 368 1.3E-36 T 11-11-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 S40542_RS04155 101c461fae3490e14c264000f43fc0af 383 Pfam PF07690 Major Facilitator Superfamily 6 338 1.3E-28 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS04155 101c461fae3490e14c264000f43fc0af 383 SUPERFAMILY SSF103473 3 374 5.62E-43 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS04155 101c461fae3490e14c264000f43fc0af 383 Gene3D G3DSA:1.20.1250.20 4 180 9.1E-17 T 11-11-2016 S40542_RS04155 101c461fae3490e14c264000f43fc0af 383 Gene3D G3DSA:1.20.1250.20 200 376 2.1E-13 T 11-11-2016 S40542_RS17245 c90488a9d61b79c78843cb0ebf273ff9 291 SUPERFAMILY SSF50891 53 123 9.64E-36 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS17245 c90488a9d61b79c78843cb0ebf273ff9 291 SUPERFAMILY SSF50891 161 251 9.64E-36 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS17245 c90488a9d61b79c78843cb0ebf273ff9 291 Gene3D G3DSA:2.40.100.10 43 127 7.1E-32 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS17245 c90488a9d61b79c78843cb0ebf273ff9 291 Gene3D G3DSA:2.40.100.10 165 237 7.1E-32 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS17245 c90488a9d61b79c78843cb0ebf273ff9 291 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 234 3.2E-36 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 S40542_RS02395 41c3bbd6a06746f37e36c10dc1ba805b 213 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 11-11-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS02395 41c3bbd6a06746f37e36c10dc1ba805b 213 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 213 37.958 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS02395 41c3bbd6a06746f37e36c10dc1ba805b 213 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 213 7.7E-20 T 11-11-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS02395 41c3bbd6a06746f37e36c10dc1ba805b 213 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 213 1.6E-83 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS02395 41c3bbd6a06746f37e36c10dc1ba805b 213 Gene3D G3DSA:2.30.110.10 15 213 5.4E-80 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS02395 41c3bbd6a06746f37e36c10dc1ba805b 213 PIRSF PIRSF000190 1 213 9.1E-79 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS02395 41c3bbd6a06746f37e36c10dc1ba805b 213 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 117 2.1E-21 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 S40542_RS02395 41c3bbd6a06746f37e36c10dc1ba805b 213 SUPERFAMILY SSF50475 13 213 1.03E-64 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 S40542_RS03815 f5a30b68a23a717590f5ad337c1532be 641 Gene3D G3DSA:1.10.287.950 403 586 2.3E-35 T 11-11-2016 S40542_RS03815 f5a30b68a23a717590f5ad337c1532be 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 450 628 5.4E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS03815 f5a30b68a23a717590f5ad337c1532be 641 SUPERFAMILY SSF58104 347 634 1.83E-46 T 11-11-2016 S40542_RS03815 f5a30b68a23a717590f5ad337c1532be 641 SMART SM00283 384 624 5.6E-18 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS04530 84b78188a7ec977f124a8f34fc677780 197 Pfam PF01725 Ham1 family 5 190 2.0E-57 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 S40542_RS04530 84b78188a7ec977f124a8f34fc677780 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 192 1.7E-64 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 S40542_RS04530 84b78188a7ec977f124a8f34fc677780 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 3 195 49.346 T 11-11-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 S40542_RS04530 84b78188a7ec977f124a8f34fc677780 197 Gene3D G3DSA:3.90.950.10 1 195 4.4E-80 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS04530 84b78188a7ec977f124a8f34fc677780 197 SUPERFAMILY SSF52972 2 194 4.97E-73 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS01365 e3dc34bfcf3ebbb4c244c3af057a5fdf 179 PIRSF PIRSF016481 2 173 5.1E-46 T 11-11-2016 IPR007446 Pilus assembly protein PilP S40542_RS01365 e3dc34bfcf3ebbb4c244c3af057a5fdf 179 Pfam PF04351 Pilus assembly protein, PilP 25 169 3.9E-46 T 11-11-2016 IPR007446 Pilus assembly protein PilP S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 Gene3D G3DSA:2.40.30.10 301 393 7.8E-46 T 11-11-2016 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 SUPERFAMILY SSF50465 298 393 1.61E-34 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 Gene3D G3DSA:3.40.50.300 4 211 3.6E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 SUPERFAMILY SSF50447 205 301 6.28E-29 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.3E-59 T 11-11-2016 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.2E-32 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.3E-15 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 3.9E-232 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 Gene3D G3DSA:2.40.30.10 212 298 5.4E-35 T 11-11-2016 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.235 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 SUPERFAMILY SSF52540 9 226 5.4E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.2E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 S40542_RS00645 4bc29b593b64ceeb5d99b332f0cd514b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.1E-15 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 S40542_RS06220 f4940960188fdacd51c47cb1ad0f1af2 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 S40542_RS06220 f4940960188fdacd51c47cb1ad0f1af2 349 SUPERFAMILY SSF50129 8 174 3.24E-36 T 11-11-2016 IPR011032 GroES-like S40542_RS06220 f4940960188fdacd51c47cb1ad0f1af2 349 SMART SM00829 16 342 0.0011 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 S40542_RS06220 f4940960188fdacd51c47cb1ad0f1af2 349 Gene3D G3DSA:3.90.180.10 2 172 1.7E-42 T 11-11-2016 IPR011032 GroES-like S40542_RS06220 f4940960188fdacd51c47cb1ad0f1af2 349 SUPERFAMILY SSF51735 143 303 4.66E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06220 f4940960188fdacd51c47cb1ad0f1af2 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 96 1.2E-13 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 S40542_RS06220 f4940960188fdacd51c47cb1ad0f1af2 349 Gene3D G3DSA:3.40.50.720 173 284 1.7E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06220 f4940960188fdacd51c47cb1ad0f1af2 349 Pfam PF00107 Zinc-binding dehydrogenase 180 296 3.1E-16 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 SUPERFAMILY SSF49785 473 610 3.78E-23 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 73 92 6.0E-14 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 6.0E-14 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 PRINTS PR00723 Subtilisin serine protease family (S8) signature 351 367 6.0E-14 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 SUPERFAMILY SSF52743 58 242 1.13E-46 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 SUPERFAMILY SSF52743 272 440 1.13E-46 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 78 89 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 Gene3D G3DSA:3.40.50.200 36 441 9.1E-49 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 Gene3D G3DSA:2.60.120.260 472 609 2.3E-26 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 Pfam PF01483 Proprotein convertase P-domain 488 576 8.2E-17 T 11-11-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 S40542_RS09645 ccbae028630bd2d342fceeb75216ff47 620 Pfam PF00082 Subtilase family 73 397 8.2E-22 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 SUPERFAMILY SSF53901 8 351 2.34E-44 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 Gene3D G3DSA:3.40.47.10 6 237 5.1E-37 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 Gene3D G3DSA:3.40.47.10 248 396 8.6E-39 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 242 354 6.7E-30 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 SUPERFAMILY SSF53901 439 575 1.6E-13 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 231 1.1E-25 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 147 163 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 Gene3D G3DSA:3.40.47.10 400 589 1.7E-8 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS13785 58bda3ef81a4c5bf155f7aab761479f8 745 SMART SM00825 Beta-ketoacyl synthase 8 361 5.2E-10 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS10075 d7b86248e2e934a092e07fc08d8d4c28 295 Pfam PF00756 Putative esterase 36 189 7.9E-20 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS10075 d7b86248e2e934a092e07fc08d8d4c28 295 SUPERFAMILY SSF53474 29 278 5.69E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS10075 d7b86248e2e934a092e07fc08d8d4c28 295 Gene3D G3DSA:3.40.50.1820 31 278 7.6E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 Pfam PF13481 AAA domain 86 223 4.7E-11 T 11-11-2016 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.2E-214 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 SMART SM00382 92 245 2.4E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 42.47 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 PRINTS PR01874 DNA repair protein radA signature 10 34 4.1E-93 T 11-11-2016 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 PRINTS PR01874 DNA repair protein radA signature 175 199 4.1E-93 T 11-11-2016 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 PRINTS PR01874 DNA repair protein radA signature 323 346 4.1E-93 T 11-11-2016 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 PRINTS PR01874 DNA repair protein radA signature 125 142 4.1E-93 T 11-11-2016 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 PRINTS PR01874 DNA repair protein radA signature 84 112 4.1E-93 T 11-11-2016 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 PRINTS PR01874 DNA repair protein radA signature 249 275 4.1E-93 T 11-11-2016 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 PRINTS PR01874 DNA repair protein radA signature 214 242 4.1E-93 T 11-11-2016 S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 Gene3D G3DSA:3.40.50.300 59 278 5.1E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 SUPERFAMILY SSF54211 256 270 2.16E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 SUPERFAMILY SSF54211 304 456 2.16E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 Gene3D G3DSA:3.30.230.10 286 456 3.9E-38 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 SUPERFAMILY SSF52540 69 291 3.4E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03210 68cae1da07d8a251cfbefead82b8f9ad 456 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 431 2.9E-8 T 11-11-2016 S40542_RS15220 7f85d7c0dea6b966bf5ebc05bea8cb16 422 SUPERFAMILY SSF111369 73 174 9.15E-5 T 11-11-2016 S40542_RS15220 7f85d7c0dea6b966bf5ebc05bea8cb16 422 Pfam PF13437 HlyD family secretion protein 242 333 1.0E-12 T 11-11-2016 S40542_RS15220 7f85d7c0dea6b966bf5ebc05bea8cb16 422 Pfam PF13533 Biotin-lipoyl like 90 128 4.9E-8 T 11-11-2016 S40542_RS15220 7f85d7c0dea6b966bf5ebc05bea8cb16 422 Gene3D G3DSA:2.40.50.100 90 114 5.7E-9 T 11-11-2016 S40542_RS15220 7f85d7c0dea6b966bf5ebc05bea8cb16 422 Gene3D G3DSA:2.40.50.100 239 271 5.7E-9 T 11-11-2016 S40542_RS02550 04fb0ba7a154c4349eb8f75627070d59 437 Gene3D G3DSA:3.90.230.10 180 436 3.9E-85 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS02550 04fb0ba7a154c4349eb8f75627070d59 437 SUPERFAMILY SSF53092 1 175 9.42E-51 T 11-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal S40542_RS02550 04fb0ba7a154c4349eb8f75627070d59 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 11-11-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site S40542_RS02550 04fb0ba7a154c4349eb8f75627070d59 437 SMART SM01011 2 137 2.1E-58 T 11-11-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 S40542_RS02550 04fb0ba7a154c4349eb8f75627070d59 437 SUPERFAMILY SSF55920 176 435 9.55E-85 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS02550 04fb0ba7a154c4349eb8f75627070d59 437 Pfam PF00557 Metallopeptidase family M24 182 412 4.7E-62 T 11-11-2016 IPR000994 Peptidase M24, structural domain S40542_RS02550 04fb0ba7a154c4349eb8f75627070d59 437 Gene3D G3DSA:3.40.350.10 1 179 1.2E-53 T 11-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal S40542_RS02550 04fb0ba7a154c4349eb8f75627070d59 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 126 5.1E-38 T 11-11-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 S40542_RS13720 a1f05be064128d62089f0e0e86ad9862 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.1E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13720 a1f05be064128d62089f0e0e86ad9862 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.1E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13720 a1f05be064128d62089f0e0e86ad9862 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.1E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13720 a1f05be064128d62089f0e0e86ad9862 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.1E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13720 a1f05be064128d62089f0e0e86ad9862 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.1E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS13720 a1f05be064128d62089f0e0e86ad9862 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 254 3.0E-49 T 11-11-2016 S40542_RS13720 a1f05be064128d62089f0e0e86ad9862 257 Gene3D G3DSA:3.40.50.720 3 254 2.3E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13720 a1f05be064128d62089f0e0e86ad9862 257 SUPERFAMILY SSF51735 9 254 1.84E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09015 ba65d3b1a51c2b752b78e04afaacaefc 374 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 44 371 1.2E-85 T 11-11-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 S40542_RS09015 ba65d3b1a51c2b752b78e04afaacaefc 374 SUPERFAMILY SSF51556 51 344 6.51E-95 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS09015 ba65d3b1a51c2b752b78e04afaacaefc 374 Pfam PF01979 Amidohydrolase family 48 372 9.8E-23 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS09015 ba65d3b1a51c2b752b78e04afaacaefc 374 PIRSF PIRSF038994 6 374 1.7E-103 T 11-11-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 S40542_RS09015 ba65d3b1a51c2b752b78e04afaacaefc 374 Gene3D G3DSA:3.20.20.140 51 345 1.3E-90 T 11-11-2016 S40542_RS01645 733a63be05a8a3c35a6662a85194058e 288 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 11 287 45.328 T 11-11-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 S40542_RS01645 733a63be05a8a3c35a6662a85194058e 288 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 52 285 7.2E-82 T 11-11-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 S40542_RS01645 733a63be05a8a3c35a6662a85194058e 288 Pfam PF02666 Phosphatidylserine decarboxylase 64 281 8.3E-58 T 11-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 S40542_RS12150 6fd3b465271a10e4d8e31518c1db4418 224 SUPERFAMILY SSF55166 18 175 1.35E-14 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 S40542_RS12150 6fd3b465271a10e4d8e31518c1db4418 224 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 23 176 4.5E-28 T 11-11-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 S40542_RS10370 5c5b7aca1dd2ef8781805ec599eeb833 490 Pfam PF06074 Protein of unknown function (DUF935) 56 478 4.2E-57 T 11-11-2016 IPR009279 Protein of unknown function DUF935 S40542_RS14440 9eb7c109698b2750f58cd6dd1d4b0f03 198 SUPERFAMILY SSF52972 2 187 1.05E-55 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS14440 9eb7c109698b2750f58cd6dd1d4b0f03 198 PIRSF PIRSF006305 1 194 3.8E-44 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 S40542_RS14440 9eb7c109698b2750f58cd6dd1d4b0f03 198 Hamap MF_00528 Septum formation protein Maf [maf]. 4 192 28.012 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 S40542_RS14440 9eb7c109698b2750f58cd6dd1d4b0f03 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 185 3.3E-52 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 S40542_RS14440 9eb7c109698b2750f58cd6dd1d4b0f03 198 Pfam PF02545 Maf-like protein 5 187 5.6E-44 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 S40542_RS14440 9eb7c109698b2750f58cd6dd1d4b0f03 198 Gene3D G3DSA:3.90.950.10 2 191 9.4E-55 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS03725 a10d780a927085e0b669a91261cfa6cf 170 Pfam PF07603 Protein of unknown function (DUF1566) 39 161 4.1E-15 T 11-11-2016 IPR011460 Protein of unknown function DUF1566 S40542_RS10085 0668d965593c22e21b2940c3f9903a98 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 317 6.3E-49 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS10085 0668d965593c22e21b2940c3f9903a98 330 Gene3D G3DSA:3.40.50.1100 92 326 7.0E-60 T 11-11-2016 S40542_RS10085 0668d965593c22e21b2940c3f9903a98 330 SUPERFAMILY SSF53686 12 326 6.04E-74 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS10085 0668d965593c22e21b2940c3f9903a98 330 PIRSF PIRSF006278 2 330 1.4E-84 T 11-11-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase S40542_RS10085 0668d965593c22e21b2940c3f9903a98 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 15 326 2.6E-87 T 11-11-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 S40542_RS13120 d876c9aaa65b5aac9f75ca07d529687d 333 Pfam PF14559 Tetratricopeptide repeat 153 213 3.3E-7 T 11-11-2016 S40542_RS13120 d876c9aaa65b5aac9f75ca07d529687d 333 Pfam PF00486 Transcriptional regulatory protein, C terminal 22 92 4.4E-7 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS13120 d876c9aaa65b5aac9f75ca07d529687d 333 SMART SM00862 22 93 0.0034 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS13120 d876c9aaa65b5aac9f75ca07d529687d 333 SUPERFAMILY SSF48452 140 249 1.52E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS13120 d876c9aaa65b5aac9f75ca07d529687d 333 SUPERFAMILY SSF46894 5 93 4.54E-10 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS13120 d876c9aaa65b5aac9f75ca07d529687d 333 Gene3D G3DSA:1.10.10.10 4 93 4.1E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS13120 d876c9aaa65b5aac9f75ca07d529687d 333 Gene3D G3DSA:1.25.40.10 148 238 4.0E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07335 eb2e07a1f0b355aa68226d715f233ee1 595 Pfam PF13387 Domain of unknown function (DUF4105) 100 267 1.0E-42 T 11-11-2016 IPR025178 Domain of unknown function DUF4105 S40542_RS11140 ed788ed0dc6575c310b8eccdc80d56c2 356 SMART SM00448 33 144 3.2E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS11140 ed788ed0dc6575c310b8eccdc80d56c2 356 SUPERFAMILY SSF52172 30 153 7.83E-24 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS11140 ed788ed0dc6575c310b8eccdc80d56c2 356 Pfam PF00072 Response regulator receiver domain 35 143 2.0E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS11140 ed788ed0dc6575c310b8eccdc80d56c2 356 Gene3D G3DSA:3.40.50.2300 30 152 1.3E-23 T 11-11-2016 S40542_RS14150 e4ab7c00836f615f6941aa934ca77b50 334 Pfam PF01343 Peptidase family S49 146 294 9.1E-48 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 S40542_RS14150 e4ab7c00836f615f6941aa934ca77b50 334 Pfam PF08496 Peptidase family S49 N-terminal 3 143 1.1E-46 T 11-11-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 S40542_RS14150 e4ab7c00836f615f6941aa934ca77b50 334 SUPERFAMILY SSF52096 84 194 6.91E-30 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS14150 e4ab7c00836f615f6941aa934ca77b50 334 SUPERFAMILY SSF52096 225 284 6.91E-30 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS14150 e4ab7c00836f615f6941aa934ca77b50 334 Gene3D G3DSA:3.90.226.10 82 190 5.1E-34 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS14150 e4ab7c00836f615f6941aa934ca77b50 334 Gene3D G3DSA:3.90.226.10 256 297 5.1E-34 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 SMART SM00387 425 537 6.3E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 536 7.6E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 SMART SM00304 190 243 0.0073 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 Pfam PF00672 HAMP domain 172 239 3.2E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 SUPERFAMILY SSF55874 388 535 1.96E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 SUPERFAMILY SSF47384 294 374 4.71E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 479 8.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 8.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 8.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 493 8.8E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 Gene3D G3DSA:3.30.565.10 388 536 6.5E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS03265 462310b7fed10d23fcf521b2da6225e7 539 Gene3D G3DSA:1.10.287.130 294 373 4.2E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS00140 5a864d81134bccb754b5997c91e8d304 269 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.7E-23 T 11-11-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 S40542_RS00140 5a864d81134bccb754b5997c91e8d304 269 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 114 189 2.2E-10 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase S40542_RS00140 5a864d81134bccb754b5997c91e8d304 269 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 268 5.8E-82 T 11-11-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 S40542_RS00140 5a864d81134bccb754b5997c91e8d304 269 Gene3D G3DSA:3.40.50.720 108 246 1.8E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00140 5a864d81134bccb754b5997c91e8d304 269 Gene3D G3DSA:3.40.192.10 1 107 4.8E-36 T 11-11-2016 S40542_RS00140 5a864d81134bccb754b5997c91e8d304 269 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 266 29.873 T 11-11-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 S40542_RS00140 5a864d81134bccb754b5997c91e8d304 269 SUPERFAMILY SSF51735 102 267 3.34E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00140 5a864d81134bccb754b5997c91e8d304 269 SUPERFAMILY SSF53223 1 101 2.59E-30 T 11-11-2016 S40542_RS08565 a45541a0239a136c08dfcdea5f3c18b3 234 PRINTS PR00463 E-class P450 group I signature 42 60 8.1E-9 T 11-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08565 a45541a0239a136c08dfcdea5f3c18b3 234 PRINTS PR00463 E-class P450 group I signature 180 206 8.1E-9 T 11-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08565 a45541a0239a136c08dfcdea5f3c18b3 234 Pfam PF00067 Cytochrome P450 7 228 2.9E-19 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08565 a45541a0239a136c08dfcdea5f3c18b3 234 SUPERFAMILY SSF48264 8 229 3.01E-19 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08565 a45541a0239a136c08dfcdea5f3c18b3 234 Gene3D G3DSA:1.10.630.10 8 228 2.4E-21 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS12675 695296490e2c88042611b08e8c1364ab 153 SUPERFAMILY SSF54427 42 152 1.56E-14 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS12675 695296490e2c88042611b08e8c1364ab 153 Gene3D G3DSA:3.10.450.50 41 147 1.7E-8 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS12675 695296490e2c88042611b08e8c1364ab 153 Pfam PF12680 SnoaL-like domain 48 146 3.9E-6 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain S40542_RS06035 df144cb6e564502e42f2ac9fb0d9d3ff 178 PIRSF PIRSF019239 6 178 1.6E-47 T 11-11-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 S40542_RS06035 df144cb6e564502e42f2ac9fb0d9d3ff 178 Pfam PF01899 Na+/H+ ion antiporter subunit 17 175 3.6E-41 T 11-11-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 S40542_RS01605 31170b8c6906b78f03e4e7a0e5719ca4 129 PIRSF PIRSF003230 1 129 2.7E-22 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 S40542_RS01605 31170b8c6906b78f03e4e7a0e5719ca4 129 SUPERFAMILY SSF54637 1 124 9.61E-31 T 11-11-2016 IPR029069 HotDog domain S40542_RS01605 31170b8c6906b78f03e4e7a0e5719ca4 129 Pfam PF13279 Thioesterase-like superfamily 10 125 1.4E-14 T 11-11-2016 S40542_RS01605 31170b8c6906b78f03e4e7a0e5719ca4 129 Gene3D G3DSA:3.10.129.10 2 126 3.3E-31 T 11-11-2016 IPR029069 HotDog domain S40542_RS06925 855c7db08bc96a0974e0a05b33442985 553 Pfam PF09458 H-type lectin domain 405 450 4.8E-5 T 11-11-2016 IPR019019 H-type lectin domain GO:0007155|GO:0030246 S40542_RS06925 855c7db08bc96a0974e0a05b33442985 553 SUPERFAMILY SSF63825 68 80 1.05E-7 T 11-11-2016 S40542_RS06925 855c7db08bc96a0974e0a05b33442985 553 SUPERFAMILY SSF63825 111 269 1.05E-7 T 11-11-2016 S40542_RS02530 cc716a9a0e9f35d8faede3421665cd8e 430 Pfam PF03773 Predicted permease 12 374 7.1E-44 T 11-11-2016 IPR005524 Predicted permease DUF318 S40542_RS16030 26dfb6cccc4adff816b9530fedcea14e 278 Gene3D G3DSA:3.40.390.10 48 267 6.9E-60 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS16030 26dfb6cccc4adff816b9530fedcea14e 278 Pfam PF06167 Glucose-regulated metallo-peptidase M90 30 267 6.0E-78 T 11-11-2016 IPR010384 MtfA family S40542_RS16030 26dfb6cccc4adff816b9530fedcea14e 278 SUPERFAMILY SSF55486 58 269 1.25E-51 T 11-11-2016 S40542_RS00595 1f636f3245933c12bf8793493b4c6916 123 Pfam PF01230 HIT domain 13 107 1.4E-27 T 11-11-2016 IPR001310 Histidine triad (HIT) protein S40542_RS00595 1f636f3245933c12bf8793493b4c6916 123 SUPERFAMILY SSF54197 2 114 6.1E-38 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 S40542_RS00595 1f636f3245933c12bf8793493b4c6916 123 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-11-2016 IPR019808 Histidine triad, conserved site S40542_RS00595 1f636f3245933c12bf8793493b4c6916 123 Gene3D G3DSA:3.30.428.10 3 114 2.0E-40 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 S40542_RS00595 1f636f3245933c12bf8793493b4c6916 123 PRINTS PR00332 Histidine triad family signature 27 45 4.6E-21 T 11-11-2016 IPR001310 Histidine triad (HIT) protein S40542_RS00595 1f636f3245933c12bf8793493b4c6916 123 PRINTS PR00332 Histidine triad family signature 6 22 4.6E-21 T 11-11-2016 IPR001310 Histidine triad (HIT) protein S40542_RS00595 1f636f3245933c12bf8793493b4c6916 123 PRINTS PR00332 Histidine triad family signature 95 105 4.6E-21 T 11-11-2016 IPR001310 Histidine triad (HIT) protein S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 Gene3D G3DSA:3.30.43.10 3 60 3.0E-12 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 336 71.221 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 Gene3D G3DSA:3.90.78.10 224 328 2.4E-39 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 6 323 1.1E-70 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 Pfam PF01565 FAD binding domain 36 139 8.5E-15 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 Gene3D G3DSA:3.30.465.10 67 223 2.7E-50 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 SUPERFAMILY SSF56194 196 329 1.44E-43 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 SUPERFAMILY SSF56176 4 190 2.29E-37 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 S40542_RS00610 be0b437400bde013c2fa31066dcb9381 336 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 200 323 8.7E-32 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 S40542_RS04930 55553daf4fb482e984c1badddebc01ef 144 PIRSF PIRSF004638 1 144 1.4E-43 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 S40542_RS04930 55553daf4fb482e984c1badddebc01ef 144 Pfam PF03653 Uncharacterised protein family (UPF0093) 7 142 5.2E-42 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 S40542_RS08570 b63a5bbe62cb79e92b022e7ac722a6b3 116 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 55 64 - T 11-11-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 S40542_RS08570 b63a5bbe62cb79e92b022e7ac722a6b3 116 Pfam PF00067 Cytochrome P450 1 110 3.8E-28 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08570 b63a5bbe62cb79e92b022e7ac722a6b3 116 SUPERFAMILY SSF48264 1 115 4.71E-35 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08570 b63a5bbe62cb79e92b022e7ac722a6b3 116 PRINTS PR00463 E-class P450 group I signature 62 85 4.4E-15 T 11-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08570 b63a5bbe62cb79e92b022e7ac722a6b3 116 PRINTS PR00463 E-class P450 group I signature 15 39 4.4E-15 T 11-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08570 b63a5bbe62cb79e92b022e7ac722a6b3 116 PRINTS PR00463 E-class P450 group I signature 52 62 4.4E-15 T 11-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS08570 b63a5bbe62cb79e92b022e7ac722a6b3 116 Gene3D G3DSA:1.10.630.10 1 115 1.4E-36 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 S40542_RS03970 d6a1f2afd84179d28a85a92cb9ab1b6c 238 SUPERFAMILY SSF46894 156 225 1.19E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS03970 d6a1f2afd84179d28a85a92cb9ab1b6c 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 222 6.5E-17 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03970 d6a1f2afd84179d28a85a92cb9ab1b6c 238 Gene3D G3DSA:1.10.10.10 155 225 7.4E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03970 d6a1f2afd84179d28a85a92cb9ab1b6c 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03970 d6a1f2afd84179d28a85a92cb9ab1b6c 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 2.6E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03970 d6a1f2afd84179d28a85a92cb9ab1b6c 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 2.6E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03970 d6a1f2afd84179d28a85a92cb9ab1b6c 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 2.6E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS03970 d6a1f2afd84179d28a85a92cb9ab1b6c 238 SMART SM00421 165 222 5.9E-20 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS15445 b12c96e1c28df254ef8c6380384489ff 384 Pfam PF00144 Beta-lactamase 42 361 3.7E-53 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS15445 b12c96e1c28df254ef8c6380384489ff 384 SUPERFAMILY SSF56601 40 370 2.82E-67 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS15445 b12c96e1c28df254ef8c6380384489ff 384 Gene3D G3DSA:3.40.710.10 40 371 1.4E-63 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS06830 69e33f68c448ee3377c80d5508cfad2a 373 Gene3D G3DSA:3.50.50.60 1 208 8.0E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS06830 69e33f68c448ee3377c80d5508cfad2a 373 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 312 2.0E-83 T 11-11-2016 S40542_RS06830 69e33f68c448ee3377c80d5508cfad2a 373 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.1E-5 T 11-11-2016 S40542_RS06830 69e33f68c448ee3377c80d5508cfad2a 373 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 4.1E-5 T 11-11-2016 S40542_RS06830 69e33f68c448ee3377c80d5508cfad2a 373 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 8.6E-6 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS06830 69e33f68c448ee3377c80d5508cfad2a 373 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 171 195 8.6E-6 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS06830 69e33f68c448ee3377c80d5508cfad2a 373 SUPERFAMILY SSF51905 2 270 6.64E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS06530 bdb2f6eee7a141ea97f99e3a42160dd5 178 Gene3D G3DSA:3.40.50.300 3 160 3.2E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06530 bdb2f6eee7a141ea97f99e3a42160dd5 178 Pfam PF00005 ABC transporter 2 129 2.5E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS06530 bdb2f6eee7a141ea97f99e3a42160dd5 178 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 1 165 5.7E-61 T 11-11-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 S40542_RS06530 bdb2f6eee7a141ea97f99e3a42160dd5 178 ProSitePatterns PS00211 ABC transporters family signature. 102 116 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS06530 bdb2f6eee7a141ea97f99e3a42160dd5 178 SUPERFAMILY SSF52540 3 160 7.62E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS22110 1c66937cf8193716618bfe6c9ae62343 101 Gene3D G3DSA:3.40.50.1100 1 100 2.1E-35 T 11-11-2016 S40542_RS22110 1c66937cf8193716618bfe6c9ae62343 101 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 1 96 3.4E-23 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS22110 1c66937cf8193716618bfe6c9ae62343 101 SUPERFAMILY SSF53686 1 98 7.6E-28 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS00855 7384083bda9fac022203f739143f7aca 225 SUPERFAMILY SSF55469 19 224 4.06E-43 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 S40542_RS00855 7384083bda9fac022203f739143f7aca 225 Pfam PF00881 Nitroreductase family 32 201 5.4E-23 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 S40542_RS00855 7384083bda9fac022203f739143f7aca 225 Gene3D G3DSA:3.40.109.10 29 223 6.0E-45 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 S40542_RS14870 b3c720f1ccfd79f1bc201ae965b99f0b 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.3E-68 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 S40542_RS14870 b3c720f1ccfd79f1bc201ae965b99f0b 181 Pfam PF00156 Phosphoribosyl transferase domain 29 154 3.1E-14 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 S40542_RS14870 b3c720f1ccfd79f1bc201ae965b99f0b 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.575 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 S40542_RS14870 b3c720f1ccfd79f1bc201ae965b99f0b 181 Gene3D G3DSA:3.40.50.2020 5 179 1.3E-68 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS14870 b3c720f1ccfd79f1bc201ae965b99f0b 181 SUPERFAMILY SSF53271 13 177 7.8E-50 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS09920 472d1012f243112d1f4680c50654b382 333 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 171 331 2.6E-47 T 11-11-2016 IPR000160 GGDEF domain S40542_RS09920 472d1012f243112d1f4680c50654b382 333 SMART SM00267 162 333 7.4E-50 T 11-11-2016 IPR000160 GGDEF domain S40542_RS09920 472d1012f243112d1f4680c50654b382 333 Pfam PF00990 Diguanylate cyclase, GGDEF domain 173 329 1.7E-44 T 11-11-2016 IPR000160 GGDEF domain S40542_RS09920 472d1012f243112d1f4680c50654b382 333 SUPERFAMILY SSF55073 178 330 7.77E-45 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS09920 472d1012f243112d1f4680c50654b382 333 SUPERFAMILY SSF55781 16 160 1.2E-18 T 11-11-2016 IPR029016 GAF domain-like S40542_RS09920 472d1012f243112d1f4680c50654b382 333 Gene3D G3DSA:3.30.450.40 16 161 1.3E-17 T 11-11-2016 IPR029016 GAF domain-like S40542_RS09920 472d1012f243112d1f4680c50654b382 333 Gene3D G3DSA:3.30.70.270 175 331 2.6E-50 T 11-11-2016 S40542_RS09920 472d1012f243112d1f4680c50654b382 333 Pfam PF01590 GAF domain 25 158 2.5E-7 T 11-11-2016 IPR003018 GAF domain GO:0005515 S40542_RS09095 0160df2b5c4fd6121424f1f5bfa1b9bb 122 SUPERFAMILY SSF51182 1 109 1.93E-26 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS09095 0160df2b5c4fd6121424f1f5bfa1b9bb 122 Gene3D G3DSA:2.60.120.10 5 107 2.6E-35 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS09095 0160df2b5c4fd6121424f1f5bfa1b9bb 122 Pfam PF07883 Cupin domain 41 97 2.1E-11 T 11-11-2016 IPR013096 Cupin 2, conserved barrel S40542_RS12180 26d115ec92cddc1fb63a82ac0a1425d5 822 Pfam PF00563 EAL domain 563 797 7.7E-69 T 11-11-2016 IPR001633 EAL domain S40542_RS12180 26d115ec92cddc1fb63a82ac0a1425d5 822 SMART SM00267 368 547 0.0037 T 11-11-2016 IPR000160 GGDEF domain S40542_RS12180 26d115ec92cddc1fb63a82ac0a1425d5 822 Gene3D G3DSA:3.20.20.450 561 809 6.4E-84 T 11-11-2016 IPR001633 EAL domain S40542_RS12180 26d115ec92cddc1fb63a82ac0a1425d5 822 SUPERFAMILY SSF55073 385 547 3.53E-7 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS12180 26d115ec92cddc1fb63a82ac0a1425d5 822 Gene3D G3DSA:3.30.70.270 381 548 7.7E-12 T 11-11-2016 S40542_RS12180 26d115ec92cddc1fb63a82ac0a1425d5 822 SUPERFAMILY SSF141868 563 810 1.44E-81 T 11-11-2016 IPR001633 EAL domain S40542_RS12180 26d115ec92cddc1fb63a82ac0a1425d5 822 SMART SM00052 557 802 7.1E-99 T 11-11-2016 IPR001633 EAL domain S40542_RS12180 26d115ec92cddc1fb63a82ac0a1425d5 822 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 535 1.7E-5 T 11-11-2016 IPR000160 GGDEF domain S40542_RS09070 d0f32354948d3bd1205e30ceb1828455 127 Pfam PF01618 MotA/TolQ/ExbB proton channel family 47 120 4.1E-16 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 471 30.897 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 SUPERFAMILY SSF48163 313 471 6.93E-33 T 11-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 Gene3D G3DSA:3.40.50.620 2 67 2.4E-44 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 Gene3D G3DSA:3.40.50.620 194 243 2.4E-44 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 Gene3D G3DSA:3.90.800.10 68 193 1.0E-39 T 11-11-2016 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 5.2E-107 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.7E-21 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 3.7E-21 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.7E-21 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 3.7E-21 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.7E-21 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 468 3.7E-141 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 Gene3D G3DSA:1.10.10.350 388 471 1.5E-13 T 11-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 Gene3D G3DSA:1.10.1160.10 245 327 1.3E-32 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 S40542_RS18410 abac64ffbbb0135e79e838418ee09b41 495 SUPERFAMILY SSF52374 3 307 3.58E-108 T 11-11-2016 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 Pfam PF01401 Angiotensin-converting enzyme 33 604 7.4E-212 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 370 386 1.6E-80 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 500 528 1.6E-80 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 261 282 1.6E-80 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 472 499 1.6E-80 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 226 253 1.6E-80 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 398 418 1.6E-80 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 437 462 1.6E-80 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 338 363 1.6E-80 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 S40542_RS13440 ca2b7b7c431a73108738b9a6e5f7943b 604 SUPERFAMILY SSF55486 34 604 3.37E-211 T 11-11-2016 S40542_RS06460 68d8b2b9bfd0f362b7fcdf2609391f0b 127 Gene3D G3DSA:3.40.50.2300 3 125 4.4E-42 T 11-11-2016 S40542_RS06460 68d8b2b9bfd0f362b7fcdf2609391f0b 127 SUPERFAMILY SSF52172 3 125 3.98E-39 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS06460 68d8b2b9bfd0f362b7fcdf2609391f0b 127 SMART SM00448 5 119 2.5E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06460 68d8b2b9bfd0f362b7fcdf2609391f0b 127 Pfam PF00072 Response regulator receiver domain 7 119 2.9E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS20150 ec2ec03fd1b7fefcbd4d6fb46ef990fd 306 Pfam PF00589 Phage integrase family 121 287 7.1E-45 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS20150 ec2ec03fd1b7fefcbd4d6fb46ef990fd 306 SUPERFAMILY SSF47823 12 100 6.08E-11 T 11-11-2016 IPR010998 Integrase, Lambda-type, N-terminal S40542_RS20150 ec2ec03fd1b7fefcbd4d6fb46ef990fd 306 Gene3D G3DSA:1.10.443.10 122 295 4.8E-48 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS20150 ec2ec03fd1b7fefcbd4d6fb46ef990fd 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 95 1.0E-16 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 S40542_RS20150 ec2ec03fd1b7fefcbd4d6fb46ef990fd 306 Gene3D G3DSA:1.10.150.130 11 97 9.5E-20 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal S40542_RS20150 ec2ec03fd1b7fefcbd4d6fb46ef990fd 306 SUPERFAMILY SSF56349 116 299 1.06E-48 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS20150 ec2ec03fd1b7fefcbd4d6fb46ef990fd 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 301 53.305 T 11-11-2016 IPR023009 Tyrosine recombinase XerC/XerD S40542_RS12295 c9a97d219ba8014f103db843092a954a 221 SMART SM00382 27 216 2.0E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS12295 c9a97d219ba8014f103db843092a954a 221 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS12295 c9a97d219ba8014f103db843092a954a 221 Pfam PF00005 ABC transporter 19 167 8.3E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS12295 c9a97d219ba8014f103db843092a954a 221 Gene3D G3DSA:3.40.50.300 3 212 3.0E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12295 c9a97d219ba8014f103db843092a954a 221 SUPERFAMILY SSF52540 3 213 9.16E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15480 8affa314332dc367be92a920470328e3 148 Pfam PF13673 Acetyltransferase (GNAT) domain 46 146 1.6E-18 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS15480 8affa314332dc367be92a920470328e3 148 Gene3D G3DSA:3.40.630.30 3 146 3.2E-39 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15480 8affa314332dc367be92a920470328e3 148 SUPERFAMILY SSF55729 4 145 2.48E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 SUPERFAMILY SSF53474 13 257 3.35E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 Pfam PF12697 Alpha/beta hydrolase family 18 250 3.3E-21 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 41 56 2.6E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 2.6E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 2.6E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 2.6E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 Gene3D G3DSA:3.40.50.1820 13 257 1.5E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 PRINTS PR00412 Epoxide hydrolase signature 84 97 8.3E-8 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 PRINTS PR00412 Epoxide hydrolase signature 98 111 8.3E-8 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 PRINTS PR00412 Epoxide hydrolase signature 233 255 8.3E-8 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 S40542_RS11765 d08dbee5316a00b57398ea23febfd9e0 257 PRINTS PR00412 Epoxide hydrolase signature 41 56 8.3E-8 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 S40542_RS18075 78bdefbc8040f71ccd7d15a87c8e89fd 523 SUPERFAMILY SSF56601 29 378 1.59E-80 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS18075 78bdefbc8040f71ccd7d15a87c8e89fd 523 Pfam PF00144 Beta-lactamase 35 365 6.1E-61 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS18075 78bdefbc8040f71ccd7d15a87c8e89fd 523 Pfam PF11954 Domain of unknown function (DUF3471) 411 515 2.4E-23 T 11-11-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal S40542_RS18075 78bdefbc8040f71ccd7d15a87c8e89fd 523 Gene3D G3DSA:3.40.710.10 17 379 3.4E-83 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS08185 b9350d88b69364c9e28de0c630ca07f4 295 SUPERFAMILY SSF158855 104 286 9.94E-36 T 11-11-2016 S40542_RS08185 b9350d88b69364c9e28de0c630ca07f4 295 Pfam PF03280 Proteobacterial lipase chaperone protein 108 279 1.4E-33 T 11-11-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 Gene3D G3DSA:1.25.40.10 219 433 2.1E-23 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SUPERFAMILY SSF48452 244 450 3.79E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 510 670 1.7E-33 T 11-11-2016 IPR000160 GGDEF domain S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SUPERFAMILY SSF55073 516 670 1.18E-33 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SUPERFAMILY SSF48452 205 273 1.14E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SUPERFAMILY SSF48452 114 163 1.14E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 Pfam PF00990 Diguanylate cyclase, GGDEF domain 511 667 2.9E-30 T 11-11-2016 IPR000160 GGDEF domain S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SMART SM00267 500 671 4.5E-31 T 11-11-2016 IPR000160 GGDEF domain S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SMART SM00028 244 277 0.0011 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SMART SM00028 284 317 6.4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SMART SM00028 324 357 150.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 SMART SM00028 207 240 120.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 Pfam PF13424 Tetratricopeptide repeat 208 275 1.5E-10 T 11-11-2016 S40542_RS11410 7bf951c467ca35a7bab7ce8a8dc23f71 672 Gene3D G3DSA:3.30.70.270 512 670 3.0E-36 T 11-11-2016 S40542_RS16950 77d8df1a525c66828818fb147f767a5e 164 Gene3D G3DSA:2.40.100.10 2 162 8.5E-53 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS16950 77d8df1a525c66828818fb147f767a5e 164 PIRSF PIRSF001467 1 164 1.2E-26 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 S40542_RS16950 77d8df1a525c66828818fb147f767a5e 164 SUPERFAMILY SSF50891 1 162 1.39E-57 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS16950 77d8df1a525c66828818fb147f767a5e 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 S40542_RS16950 77d8df1a525c66828818fb147f767a5e 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 3.6E-46 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 S40542_RS16950 77d8df1a525c66828818fb147f767a5e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.1E-11 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 S40542_RS16950 77d8df1a525c66828818fb147f767a5e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.1E-11 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 S40542_RS16950 77d8df1a525c66828818fb147f767a5e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.1E-11 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 S40542_RS16345 473143e076be1cb7747f558691ab13de 403 Pfam PF02687 FtsX-like permease family 285 396 7.0E-14 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS16345 473143e076be1cb7747f558691ab13de 403 Pfam PF12704 MacB-like periplasmic core domain 25 247 5.4E-8 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS12685 ca25936d20fd7a56d937821f2f7138d9 275 Pfam PF13411 MerR HTH family regulatory protein 7 74 1.6E-15 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS12685 ca25936d20fd7a56d937821f2f7138d9 275 Pfam PF07739 TipAS antibiotic-recognition domain 129 255 4.6E-6 T 11-11-2016 IPR012925 TipAS antibiotic-recognition domain S40542_RS12685 ca25936d20fd7a56d937821f2f7138d9 275 SUPERFAMILY SSF46955 6 113 4.76E-26 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS12685 ca25936d20fd7a56d937821f2f7138d9 275 Gene3D G3DSA:1.10.1660.10 7 117 1.2E-25 T 11-11-2016 S40542_RS12685 ca25936d20fd7a56d937821f2f7138d9 275 SMART SM00422 7 75 1.2E-21 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS12685 ca25936d20fd7a56d937821f2f7138d9 275 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 32 - T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 Gene3D G3DSA:3.40.1060.10 167 280 8.0E-38 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 2 463 3.8E-244 T 11-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 SUPERFAMILY SSF53732 3 463 5.1E-165 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 399 412 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 195 208 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 286 300 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 133 148 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 119 132 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 343 354 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 209 222 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 82 95 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 PRINTS PR00415 Aconitase family signature 108 116 5.1E-48 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 Gene3D G3DSA:3.30.499.10 3 159 3.7E-24 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 Gene3D G3DSA:3.30.499.10 335 464 6.2E-62 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 59.382 T 11-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 S40542_RS19855 677bbcf9f586b8b6160ad73b7c449b46 467 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.7E-154 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 5.4E-31 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 SMART SM01390 3 95 1.3E-50 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 Gene3D G3DSA:3.10.290.10 99 198 9.4E-34 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 Gene3D G3DSA:1.10.1050.10 1 98 6.3E-43 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-11-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 SUPERFAMILY SSF55174 3 206 4.19E-74 T 11-11-2016 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 Pfam PF01479 S4 domain 96 143 1.2E-19 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.5E-87 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 37.179 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 S40542_RS00985 ed96f308c36ab476b3ea6d39349829f8 206 SMART SM00363 96 160 7.6E-19 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 Gene3D G3DSA:3.40.50.620 3 204 4.3E-66 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 SUPERFAMILY SSF52374 4 329 4.29E-76 T 11-11-2016 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 Gene3D G3DSA:1.10.240.10 205 297 6.8E-31 T 11-11-2016 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.0E-20 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 3.0E-20 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 196 206 3.0E-20 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 3.0E-20 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 Pfam PF00579 tRNA synthetases class I (W and Y) 4 282 5.4E-51 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 S40542_RS07920 bc8a550d6baf5e8f36167701ae90c778 332 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 329 6.3E-70 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 S40542_RS13905 3c9c09fd9f9fdb032160bde3c1333e9e 219 Pfam PF01144 Coenzyme A transferase 6 200 7.1E-44 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 S40542_RS13905 3c9c09fd9f9fdb032160bde3c1333e9e 219 Gene3D G3DSA:3.40.810.20 4 211 1.3E-90 T 11-11-2016 S40542_RS13905 3c9c09fd9f9fdb032160bde3c1333e9e 219 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 3.6E-98 T 11-11-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 S40542_RS13905 3c9c09fd9f9fdb032160bde3c1333e9e 219 SMART SM00882 6 202 2.3E-72 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 S40542_RS13905 3c9c09fd9f9fdb032160bde3c1333e9e 219 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 11-11-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 S40542_RS13905 3c9c09fd9f9fdb032160bde3c1333e9e 219 SUPERFAMILY SSF100950 5 217 2.83E-74 T 11-11-2016 S40542_RS01320 6c971436cf1c1497a8f065b4ad4a5001 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.8E-23 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01320 6c971436cf1c1497a8f065b4ad4a5001 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.8E-23 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01320 6c971436cf1c1497a8f065b4ad4a5001 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.8E-23 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01320 6c971436cf1c1497a8f065b4ad4a5001 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 32.303 T 11-11-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01320 6c971436cf1c1497a8f065b4ad4a5001 71 SUPERFAMILY SSF143800 1 67 2.2E-29 T 11-11-2016 S40542_RS01320 6c971436cf1c1497a8f065b4ad4a5001 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01320 6c971436cf1c1497a8f065b4ad4a5001 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 2.3E-35 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS01320 6c971436cf1c1497a8f065b4ad4a5001 71 Pfam PF01197 Ribosomal protein L31 1 65 3.8E-33 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS03680 e8a899b139b50b8b4871e07ab4d1d77e 143 SMART SM00450 40 138 5.2E-15 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS03680 e8a899b139b50b8b4871e07ab4d1d77e 143 Gene3D G3DSA:3.40.250.10 23 143 3.4E-24 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS03680 e8a899b139b50b8b4871e07ab4d1d77e 143 SUPERFAMILY SSF52821 17 142 1.83E-27 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS03680 e8a899b139b50b8b4871e07ab4d1d77e 143 Pfam PF00581 Rhodanese-like domain 42 135 1.3E-12 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS13245 73d79467b3d79aaf0b2e4128361fdd7f 332 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 319 2.1E-139 T 11-11-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 S40542_RS13245 73d79467b3d79aaf0b2e4128361fdd7f 332 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 7 87 4.6E-23 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 S40542_RS13245 73d79467b3d79aaf0b2e4128361fdd7f 332 SUPERFAMILY SSF56349 214 315 2.5E-43 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS13245 73d79467b3d79aaf0b2e4128361fdd7f 332 SUPERFAMILY SSF56349 100 185 2.5E-43 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS13245 73d79467b3d79aaf0b2e4128361fdd7f 332 Gene3D G3DSA:1.10.443.10 105 309 1.7E-45 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS13245 73d79467b3d79aaf0b2e4128361fdd7f 332 Gene3D G3DSA:1.10.150.130 9 80 1.6E-5 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal S40542_RS13245 73d79467b3d79aaf0b2e4128361fdd7f 332 Pfam PF00589 Phage integrase family 105 306 4.9E-42 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS08245 baffffacd8423819b3ad912ae80ced1a 723 Pfam PF00929 Exonuclease 550 704 1.5E-36 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS08245 baffffacd8423819b3ad912ae80ced1a 723 SMART SM00990 430 541 1.4E-18 T 11-11-2016 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 S40542_RS08245 baffffacd8423819b3ad912ae80ced1a 723 Gene3D G3DSA:3.30.420.10 547 709 6.6E-54 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS08245 baffffacd8423819b3ad912ae80ced1a 723 SUPERFAMILY SSF53098 543 708 5.32E-54 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS08245 baffffacd8423819b3ad912ae80ced1a 723 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 549 712 7.3E-33 T 11-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS08245 baffffacd8423819b3ad912ae80ced1a 723 SMART SM00479 548 713 1.9E-41 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS08245 baffffacd8423819b3ad912ae80ced1a 723 Pfam PF08774 VRR-NUC domain 469 541 2.9E-11 T 11-11-2016 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 S40542_RS02775 783d850e391fc8ae353d8ada64f1f22a 391 Gene3D G3DSA:3.40.50.300 8 194 1.5E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02775 783d850e391fc8ae353d8ada64f1f22a 391 SUPERFAMILY SSF52540 8 296 4.2E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02775 783d850e391fc8ae353d8ada64f1f22a 391 Pfam PF01637 ATPase domain predominantly from Archaea 12 246 1.5E-9 T 11-11-2016 IPR011579 ATPase domain GO:0005524 S40542_RS04255 6606548d59176cce6446cd21250fb382 206 Pfam PF04973 Nicotinamide mononucleotide transporter 16 192 7.1E-47 T 11-11-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 S40542_RS04255 6606548d59176cce6446cd21250fb382 206 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 18 194 3.0E-17 T 11-11-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 S40542_RS17170 5312b51b452e6d1bdc88bde674dbbed9 154 Pfam PF00075 RNase H 3 141 3.2E-52 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 S40542_RS17170 5312b51b452e6d1bdc88bde674dbbed9 154 SUPERFAMILY SSF53098 3 143 1.09E-56 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS17170 5312b51b452e6d1bdc88bde674dbbed9 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 33.965 T 11-11-2016 IPR022892 Ribonuclease H GO:0004523 S40542_RS17170 5312b51b452e6d1bdc88bde674dbbed9 154 Gene3D G3DSA:3.30.420.10 3 145 3.0E-59 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS11350 d32a3d7cd779bd713886273b36a70c6f 598 Gene3D G3DSA:3.40.630.10 52 335 1.2E-45 T 11-11-2016 S40542_RS11350 d32a3d7cd779bd713886273b36a70c6f 598 Pfam PF00246 Zinc carboxypeptidase 59 245 4.2E-22 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS11350 d32a3d7cd779bd713886273b36a70c6f 598 SMART SM00631 53 380 1.5E-4 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS11350 d32a3d7cd779bd713886273b36a70c6f 598 SUPERFAMILY SSF53187 54 328 2.81E-45 T 11-11-2016 S40542_RS03515 4d58735510fa633e2d992c68d52c95fa 306 Gene3D G3DSA:3.40.50.300 2 228 1.2E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03515 4d58735510fa633e2d992c68d52c95fa 306 Pfam PF00005 ABC transporter 22 165 1.0E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS03515 4d58735510fa633e2d992c68d52c95fa 306 SMART SM00382 30 212 3.7E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS03515 4d58735510fa633e2d992c68d52c95fa 306 SUPERFAMILY SSF52540 3 232 9.59E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03515 4d58735510fa633e2d992c68d52c95fa 306 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 PIRSF PIRSF001400 1 429 2.2E-191 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 Gene3D G3DSA:3.20.20.120 130 428 7.7E-136 T 11-11-2016 IPR029065 Enolase C-terminal domain-like S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 PRINTS PR00148 Enolase signature 165 178 1.8E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 PRINTS PR00148 Enolase signature 338 352 1.8E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 PRINTS PR00148 Enolase signature 107 123 1.8E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 PRINTS PR00148 Enolase signature 367 384 1.8E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 PRINTS PR00148 Enolase signature 315 326 1.8E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 PRINTS PR00148 Enolase signature 37 51 1.8E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 SMART SM01192 143 429 2.5E-222 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 Pfam PF03952 Enolase, N-terminal domain 4 134 1.2E-57 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 SUPERFAMILY SSF54826 3 138 1.19E-55 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 1.2E-205 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 SMART SM01193 4 134 7.8E-92 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 ProSitePatterns PS00164 Enolase signature. 338 351 - T 11-11-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 Hamap MF_00318 Enolase [eno]. 2 415 44.29 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 Gene3D G3DSA:3.30.390.10 3 127 7.6E-55 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 428 2.5E-140 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS16770 c134bb1999afe29948d0feee866cffac 430 SUPERFAMILY SSF51604 143 426 1.98E-130 T 11-11-2016 IPR029065 Enolase C-terminal domain-like S40542_RS04470 b4dd48c5dc1a9256b342c2d126c59815 275 Gene3D G3DSA:3.10.350.10 48 91 9.4E-13 T 11-11-2016 IPR018392 LysM domain S40542_RS04470 b4dd48c5dc1a9256b342c2d126c59815 275 SUPERFAMILY SSF51261 49 272 5.23E-46 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS04470 b4dd48c5dc1a9256b342c2d126c59815 275 Pfam PF01476 LysM domain 49 90 5.5E-10 T 11-11-2016 IPR018392 LysM domain S40542_RS04470 b4dd48c5dc1a9256b342c2d126c59815 275 Pfam PF01551 Peptidase family M23 175 268 2.4E-26 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS04470 b4dd48c5dc1a9256b342c2d126c59815 275 SMART SM00257 48 92 1.4E-11 T 11-11-2016 IPR018392 LysM domain S40542_RS04470 b4dd48c5dc1a9256b342c2d126c59815 275 Gene3D G3DSA:2.70.70.10 134 274 2.4E-35 T 11-11-2016 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 SUPERFAMILY SSF56935 425 545 2.0E-94 T 11-11-2016 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 SUPERFAMILY SSF56935 596 874 2.0E-94 T 11-11-2016 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 SUPERFAMILY SSF56935 100 284 2.0E-94 T 11-11-2016 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 SUPERFAMILY SSF56935 315 365 2.0E-94 T 11-11-2016 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 SUPERFAMILY SSF49464 23 97 9.81E-11 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 Gene3D G3DSA:2.60.40.1120 25 100 6.3E-10 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 Pfam PF13715 CarboxypepD_reg-like domain 25 85 5.5E-8 T 11-11-2016 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 Gene3D G3DSA:2.40.170.20 421 545 5.1E-59 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 Gene3D G3DSA:2.40.170.20 236 363 5.1E-59 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 Gene3D G3DSA:2.40.170.20 596 873 5.1E-59 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 218 9.2E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 107 - T 11-11-2016 IPR010916 TonB box, conserved site S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 Pfam PF00593 TonB dependent receptor 605 872 3.1E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10730 14af84ae1de031c66b7c2f61402a4744 874 Gene3D G3DSA:2.170.130.10 101 225 9.7E-31 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07120 f918d9a362b7fd0840f5c11177094aa0 262 SMART SM00382 45 227 2.4E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS07120 f918d9a362b7fd0840f5c11177094aa0 262 Pfam PF00005 ABC transporter 37 179 2.5E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS07120 f918d9a362b7fd0840f5c11177094aa0 262 SUPERFAMILY SSF52540 31 240 2.01E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07120 f918d9a362b7fd0840f5c11177094aa0 262 Gene3D G3DSA:3.40.50.300 3 242 4.0E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS13340 f589bf6c1c934aef469e1787af96e050 125 SMART SM00422 1 69 2.6E-13 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13340 f589bf6c1c934aef469e1787af96e050 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.9E-8 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13340 f589bf6c1c934aef469e1787af96e050 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.9E-8 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13340 f589bf6c1c934aef469e1787af96e050 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.9E-8 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13340 f589bf6c1c934aef469e1787af96e050 125 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13340 f589bf6c1c934aef469e1787af96e050 125 Pfam PF13411 MerR HTH family regulatory protein 2 64 9.1E-17 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 S40542_RS13340 f589bf6c1c934aef469e1787af96e050 125 Gene3D G3DSA:1.10.1660.10 1 112 8.5E-27 T 11-11-2016 S40542_RS13340 f589bf6c1c934aef469e1787af96e050 125 SUPERFAMILY SSF46955 1 112 4.4E-23 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 SUPERFAMILY SSF53474 422 662 7.68E-40 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 7 408 1.6E-101 T 11-11-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 Gene3D G3DSA:2.130.10.120 77 412 1.2E-97 T 11-11-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 Pfam PF00326 Prolyl oligopeptidase family 468 683 2.3E-65 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 Gene3D G3DSA:3.40.50.1820 423 662 1.5E-31 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 595 610 4.1E-46 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 613 635 4.1E-46 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 479 503 4.1E-46 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 453 471 4.1E-46 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 507 526 4.1E-46 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 537 557 4.1E-46 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 S40542_RS00410 a5bbc330727a3664f04eb797f9f7c964 688 SUPERFAMILY SSF50993 2 415 4.71E-87 T 11-11-2016 S40542_RS11955 833105390089dfdfce88f196af0b808f 752 Gene3D G3DSA:1.25.40.10 476 545 6.0E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11955 833105390089dfdfce88f196af0b808f 752 SUPERFAMILY SSF55729 577 731 4.89E-16 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS11955 833105390089dfdfce88f196af0b808f 752 Pfam PF13302 Acetyltransferase (GNAT) domain 578 729 1.1E-11 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS11955 833105390089dfdfce88f196af0b808f 752 Gene3D G3DSA:3.40.630.30 576 734 6.4E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS03340 34f26d362cfdc8cfb20ed58f70e5d4a5 131 SUPERFAMILY SSF54593 3 130 4.16E-27 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS03340 34f26d362cfdc8cfb20ed58f70e5d4a5 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 8.4E-12 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS03340 34f26d362cfdc8cfb20ed58f70e5d4a5 131 Gene3D G3DSA:3.10.180.10 3 127 2.9E-29 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS15335 1dd0973df1942a4096a11e81a8d71ed7 766 SUPERFAMILY SSF49344 25 214 1.45E-35 T 11-11-2016 S40542_RS15335 1dd0973df1942a4096a11e81a8d71ed7 766 Pfam PF06452 Carbohydrate family 9 binding domain-like 35 189 6.0E-11 T 11-11-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 S40542_RS15335 1dd0973df1942a4096a11e81a8d71ed7 766 Gene3D G3DSA:2.60.40.1190 26 202 8.3E-26 T 11-11-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 S40542_RS20470 8d3b22644ea6bff053a94e34f9beaf41 92 SUPERFAMILY SSF47413 14 78 5.09E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS20470 8d3b22644ea6bff053a94e34f9beaf41 92 SMART SM00530 22 74 6.5E-5 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS20470 8d3b22644ea6bff053a94e34f9beaf41 92 Gene3D G3DSA:1.10.260.40 13 71 5.8E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS20470 8d3b22644ea6bff053a94e34f9beaf41 92 Pfam PF12844 Helix-turn-helix domain 22 74 3.0E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS15690 21399b44112b0b304b3d5f4c7365b6de 279 Gene3D G3DSA:3.30.70.100 181 260 1.2E-18 T 11-11-2016 S40542_RS15690 21399b44112b0b304b3d5f4c7365b6de 279 Pfam PF05552 Conserved TM helix 19 60 1.3E-7 T 11-11-2016 IPR008910 Conserved TM helix S40542_RS15690 21399b44112b0b304b3d5f4c7365b6de 279 Gene3D G3DSA:2.30.30.60 125 173 1.4E-12 T 11-11-2016 S40542_RS15690 21399b44112b0b304b3d5f4c7365b6de 279 SUPERFAMILY SSF50182 110 173 1.9E-12 T 11-11-2016 IPR010920 LSM domain S40542_RS15690 21399b44112b0b304b3d5f4c7365b6de 279 SUPERFAMILY SSF82689 175 273 3.66E-26 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 S40542_RS15690 21399b44112b0b304b3d5f4c7365b6de 279 SUPERFAMILY SSF82861 24 108 7.45E-16 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 S40542_RS15690 21399b44112b0b304b3d5f4c7365b6de 279 Pfam PF00924 Mechanosensitive ion channel 67 261 1.9E-37 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 S40542_RS12385 b34a3e476fdecf947f2ab48959d2e766 206 SUPERFAMILY SSF81452 12 204 6.41E-55 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12385 b34a3e476fdecf947f2ab48959d2e766 206 Gene3D G3DSA:1.20.120.80 28 204 1.9E-48 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12385 b34a3e476fdecf947f2ab48959d2e766 206 Pfam PF00510 Cytochrome c oxidase subunit III 28 204 1.4E-12 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS12385 b34a3e476fdecf947f2ab48959d2e766 206 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 27 206 1.8E-74 T 11-11-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 S40542_RS16985 560d64941f7690715ede1b247dcd6f5c 542 Pfam PF13448 Domain of unknown function (DUF4114) 157 239 4.1E-21 T 11-11-2016 IPR025193 Domain of unknown function DUF4114 S40542_RS16985 560d64941f7690715ede1b247dcd6f5c 542 Pfam PF16130 Domain of unknown function (DUF4842) 323 527 1.6E-47 T 11-11-2016 IPR032295 Domain of unknown function DUF4842 S40542_RS16985 560d64941f7690715ede1b247dcd6f5c 542 TIGRFAM TIGR04456 LruC_dom: LruC domain 291 528 5.8E-71 T 11-11-2016 IPR031025 LruC domain S40542_RS01620 2941f0261631afc3ce9e94a23347ac53 340 Gene3D G3DSA:3.50.50.60 7 45 1.0E-4 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS01620 2941f0261631afc3ce9e94a23347ac53 340 SUPERFAMILY SSF51905 8 217 1.08E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS01620 2941f0261631afc3ce9e94a23347ac53 340 Pfam PF01266 FAD dependent oxidoreductase 10 329 1.5E-29 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 S40542_RS01620 2941f0261631afc3ce9e94a23347ac53 340 SUPERFAMILY SSF54373 210 299 2.62E-15 T 11-11-2016 S40542_RS01620 2941f0261631afc3ce9e94a23347ac53 340 Gene3D G3DSA:3.30.9.10 153 299 3.2E-20 T 11-11-2016 S40542_RS20575 488d736e760e340d01256cb7cdc7a4f0 216 Gene3D G3DSA:1.10.530.40 13 190 1.7E-21 T 11-11-2016 IPR023347 Lysozyme domain GO:0003796 S40542_RS20575 488d736e760e340d01256cb7cdc7a4f0 216 SUPERFAMILY SSF53955 13 178 2.55E-22 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS10910 a7ce4d67ada8fe99a8da72a1451f4c3a 356 SUPERFAMILY SSF55874 214 350 1.2E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS10910 a7ce4d67ada8fe99a8da72a1451f4c3a 356 Pfam PF06580 Histidine kinase 158 238 2.6E-26 T 11-11-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 S40542_RS10910 a7ce4d67ada8fe99a8da72a1451f4c3a 356 Gene3D G3DSA:3.30.565.10 211 353 1.5E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08510 c83ff0037760c625de31ff0990943597 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 3.1E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS08510 c83ff0037760c625de31ff0990943597 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 3.1E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS08510 c83ff0037760c625de31ff0990943597 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 3.1E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS08510 c83ff0037760c625de31ff0990943597 222 SMART SM00421 159 216 2.8E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS08510 c83ff0037760c625de31ff0990943597 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 214 5.8E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 S40542_RS08510 c83ff0037760c625de31ff0990943597 222 SUPERFAMILY SSF46894 144 221 4.08E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS08510 c83ff0037760c625de31ff0990943597 222 Gene3D G3DSA:1.10.10.10 161 220 4.6E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS13895 a125b3517bb97007ec63fd29b76771d2 302 Pfam PF00682 HMGL-like 7 276 5.2E-53 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 S40542_RS13895 a125b3517bb97007ec63fd29b76771d2 302 Gene3D G3DSA:3.20.20.70 6 286 3.5E-87 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS13895 a125b3517bb97007ec63fd29b76771d2 302 SUPERFAMILY SSF51569 4 297 5.13E-72 T 11-11-2016 S40542_RS01295 25c3dbf5eb5ac1edcfda5b0f6de666a6 124 Pfam PF06155 Protein of unknown function (DUF971) 8 91 5.2E-26 T 11-11-2016 IPR010376 Domain of unknown function DUF971 Reactome: R-HSA-71262 S40542_RS17235 04e61a2a70e8a8856dc6d161824bb885 182 Pfam PF07348 Syd protein (SUKH-2) 8 178 6.7E-59 T 11-11-2016 IPR009948 Syd GO:0009898 S40542_RS17235 04e61a2a70e8a8856dc6d161824bb885 182 Hamap MF_01104 Protein Syd [syd]. 2 182 30.509 T 11-11-2016 IPR009948 Syd GO:0009898 S40542_RS01180 64291e6401df472a21d1707fde1b8cda 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 7.3E-76 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01180 64291e6401df472a21d1707fde1b8cda 200 SUPERFAMILY SSF52166 6 199 3.4E-73 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 S40542_RS01180 64291e6401df472a21d1707fde1b8cda 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 3.0E-66 T 11-11-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 S40542_RS01180 64291e6401df472a21d1707fde1b8cda 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 34.138 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS01180 64291e6401df472a21d1707fde1b8cda 200 Gene3D G3DSA:3.40.1370.10 52 199 2.3E-58 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 S40542_RS11995 975931367358c7c051fa99dc75f385eb 134 SUPERFAMILY SSF53955 8 131 1.89E-19 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS11995 975931367358c7c051fa99dc75f385eb 134 Gene3D G3DSA:1.10.530.40 8 132 1.1E-15 T 11-11-2016 IPR023347 Lysozyme domain GO:0003796 S40542_RS10545 2984dd9091b3359e05996d10d406736b 243 Pfam PF08867 FRG domain 24 112 1.1E-26 T 11-11-2016 IPR014966 FRG domain S40542_RS10545 2984dd9091b3359e05996d10d406736b 243 SMART SM00901 22 136 1.8E-33 T 11-11-2016 IPR014966 FRG domain S40542_RS16755 a161f2df838344e47edf330dcb3cfc01 172 Gene3D G3DSA:3.90.79.10 4 151 3.9E-32 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS16755 a161f2df838344e47edf330dcb3cfc01 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.1E-7 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 S40542_RS16755 a161f2df838344e47edf330dcb3cfc01 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.1E-7 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 S40542_RS16755 a161f2df838344e47edf330dcb3cfc01 172 Pfam PF00293 NUDIX domain 7 146 3.4E-28 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS16755 a161f2df838344e47edf330dcb3cfc01 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.772 T 11-11-2016 IPR022927 RNA pyrophosphohydrolase RppH S40542_RS16755 a161f2df838344e47edf330dcb3cfc01 172 SUPERFAMILY SSF55811 7 159 2.17E-34 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS16755 a161f2df838344e47edf330dcb3cfc01 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 S40542_RS15710 01cd975d2ffc405fe166c6cbfc53fd7f 184 SMART SM00463 97 175 3.6E-16 T 11-11-2016 IPR002625 Smr domain S40542_RS15710 01cd975d2ffc405fe166c6cbfc53fd7f 184 Pfam PF01713 Smr domain 100 173 4.1E-18 T 11-11-2016 IPR002625 Smr domain S40542_RS15710 01cd975d2ffc405fe166c6cbfc53fd7f 184 SUPERFAMILY SSF160443 98 174 3.01E-11 T 11-11-2016 IPR002625 Smr domain S40542_RS09805 25841c6724a3bf009cdf9e9e0198f487 168 SUPERFAMILY SSF55729 3 165 1.73E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS09805 25841c6724a3bf009cdf9e9e0198f487 168 Pfam PF13673 Acetyltransferase (GNAT) domain 23 149 2.0E-17 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS09805 25841c6724a3bf009cdf9e9e0198f487 168 Gene3D G3DSA:3.40.630.30 2 167 1.0E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13775 89d6516c7bd61e873a440b336ed43953 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 5.9E-7 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS13775 89d6516c7bd61e873a440b336ed43953 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 5.9E-7 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS13775 89d6516c7bd61e873a440b336ed43953 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 5.9E-7 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 S40542_RS13775 89d6516c7bd61e873a440b336ed43953 366 Pfam PF01061 ABC-2 type transporter 164 326 1.2E-25 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 S40542_RS07390 6033db1cf89fb5f0c6b1a3e3a7410ab7 114 Pfam PF00486 Transcriptional regulatory protein, C terminal 15 85 5.1E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS07390 6033db1cf89fb5f0c6b1a3e3a7410ab7 114 Gene3D G3DSA:1.10.10.10 3 86 1.5E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS07390 6033db1cf89fb5f0c6b1a3e3a7410ab7 114 SMART SM00862 10 85 8.5E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS07390 6033db1cf89fb5f0c6b1a3e3a7410ab7 114 SUPERFAMILY SSF46894 9 85 7.94E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS13335 23055d00f97adf1ac6ec3c48b98e6ec6 191 Gene3D G3DSA:3.40.50.360 2 180 3.2E-33 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS13335 23055d00f97adf1ac6ec3c48b98e6ec6 191 Pfam PF02525 Flavodoxin-like fold 3 173 1.8E-28 T 11-11-2016 IPR003680 Flavodoxin-like fold S40542_RS13335 23055d00f97adf1ac6ec3c48b98e6ec6 191 SUPERFAMILY SSF52218 1 179 6.74E-39 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 Gene3D G3DSA:3.40.1160.10 1 50 8.4E-47 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 Gene3D G3DSA:3.40.1160.10 105 286 8.4E-47 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 Gene3D G3DSA:3.40.50.720 427 596 2.7E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 SUPERFAMILY SSF55347 575 762 3.92E-42 T 11-11-2016 S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 434 566 2.4E-14 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 SUPERFAMILY SSF53633 4 285 2.88E-56 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 Gene3D G3DSA:3.30.360.10 597 757 3.5E-47 T 11-11-2016 S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 621 643 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 291 2.6E-62 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 SUPERFAMILY SSF51735 427 597 2.73E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 Pfam PF00696 Amino acid kinase family 3 271 3.5E-41 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase S40542_RS01340 e58adf9b00c3839edcbf0ddc158f52c7 782 Pfam PF00742 Homoserine dehydrogenase 576 774 9.0E-42 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 S40542_RS04455 8951b910742119c93d23131a7fae5448 342 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 2 331 27.838 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS04455 8951b910742119c93d23131a7fae5448 342 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 182 326 1.7E-15 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS04455 8951b910742119c93d23131a7fae5448 342 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 6 164 9.9E-38 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS04455 8951b910742119c93d23131a7fae5448 342 SUPERFAMILY SSF55120 4 328 8.06E-84 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS06480 77c5bec546420afe013b7565c928d749 261 Gene3D G3DSA:3.40.50.300 2 254 1.0E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06480 77c5bec546420afe013b7565c928d749 261 SUPERFAMILY SSF52540 2 254 8.18E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06480 77c5bec546420afe013b7565c928d749 261 Pfam PF13614 AAA domain 2 180 8.9E-50 T 11-11-2016 IPR025669 AAA domain S40542_RS11760 72b3a4f2945f24a8cdf152f914bcc64a 182 SUPERFAMILY SSF47598 1 35 2.13E-13 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 S40542_RS11760 72b3a4f2945f24a8cdf152f914bcc64a 182 Pfam PF03925 SeqA protein C-terminal domain 73 180 1.4E-37 T 11-11-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 S40542_RS11760 72b3a4f2945f24a8cdf152f914bcc64a 182 PIRSF PIRSF019401 1 182 2.0E-63 T 11-11-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 S40542_RS11760 72b3a4f2945f24a8cdf152f914bcc64a 182 Gene3D G3DSA:1.20.1380.10 72 181 8.7E-39 T 11-11-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 S40542_RS11760 72b3a4f2945f24a8cdf152f914bcc64a 182 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 182 42.027 T 11-11-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 S40542_RS11760 72b3a4f2945f24a8cdf152f914bcc64a 182 SUPERFAMILY SSF82808 72 181 2.48E-37 T 11-11-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 S40542_RS11760 72b3a4f2945f24a8cdf152f914bcc64a 182 Gene3D G3DSA:1.10.1220.10 1 37 6.0E-24 T 11-11-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 S40542_RS05930 b403ccb01a5973b7e04ef4c0507989f8 179 SUPERFAMILY SSF54637 27 166 6.64E-28 T 11-11-2016 IPR029069 HotDog domain S40542_RS05930 b403ccb01a5973b7e04ef4c0507989f8 179 Pfam PF13279 Thioesterase-like superfamily 34 164 3.5E-23 T 11-11-2016 S40542_RS05930 b403ccb01a5973b7e04ef4c0507989f8 179 Gene3D G3DSA:3.10.129.10 26 132 1.4E-20 T 11-11-2016 IPR029069 HotDog domain S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 Gene3D G3DSA:3.40.50.300 1 211 9.8E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 Pfam PF00406 Adenylate kinase 5 185 3.9E-59 T 11-11-2016 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-11-2016 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.646 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.3E-36 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.3E-36 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.3E-36 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.3E-36 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.3E-36 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.4E-16 T 11-11-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 211 1.2E-75 T 11-11-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 S40542_RS12235 e2d0704b1ceb089a30b455d71aa3fe41 214 SUPERFAMILY SSF52540 1 209 1.0E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01125 1e297458f512e37ef14dcb780de70cb5 368 Gene3D G3DSA:3.40.50.2300 28 227 4.1E-40 T 11-11-2016 S40542_RS01125 1e297458f512e37ef14dcb780de70cb5 368 SUPERFAMILY SSF53822 28 325 4.71E-50 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS01125 1e297458f512e37ef14dcb780de70cb5 368 Pfam PF13458 Periplasmic binding protein 29 335 9.6E-45 T 11-11-2016 IPR028081 Leucine-binding protein domain S40542_RS15130 62ae9eb4e5a326b4840564b1ff70c52c 389 Gene3D G3DSA:2.40.160.10 86 383 1.2E-22 T 11-11-2016 IPR023614 Porin domain S40542_RS15130 62ae9eb4e5a326b4840564b1ff70c52c 389 SUPERFAMILY SSF56935 86 383 7.02E-30 T 11-11-2016 S40542_RS19255 945b36db5a96f07c7f2bd44a585cb66d 51 SUPERFAMILY SSF57829 1 49 1.28E-19 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 S40542_RS19255 945b36db5a96f07c7f2bd44a585cb66d 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 5.0E-26 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19255 945b36db5a96f07c7f2bd44a585cb66d 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.793 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19255 945b36db5a96f07c7f2bd44a585cb66d 51 Pfam PF00471 Ribosomal protein L33 4 49 2.6E-19 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS19255 945b36db5a96f07c7f2bd44a585cb66d 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-11-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS09940 9b8ef7d11959c49d12b56245ee32a15e 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 1.2E-9 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS09940 9b8ef7d11959c49d12b56245ee32a15e 118 SUPERFAMILY SSF54593 6 115 2.55E-22 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS09940 9b8ef7d11959c49d12b56245ee32a15e 118 Gene3D G3DSA:3.10.180.10 7 116 8.4E-26 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS14990 b6e8f6fc1bc572d6017049f27fe23873 151 Pfam PF02810 SEC-C motif 134 151 5.4E-10 T 11-11-2016 IPR004027 SEC-C motif S40542_RS14990 b6e8f6fc1bc572d6017049f27fe23873 151 SUPERFAMILY SSF54427 22 124 1.14E-28 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS14990 b6e8f6fc1bc572d6017049f27fe23873 151 Gene3D G3DSA:3.10.450.50 2 151 4.4E-49 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS14990 b6e8f6fc1bc572d6017049f27fe23873 151 SUPERFAMILY SSF103642 131 151 2.29E-7 T 11-11-2016 S40542_RS13310 4e506c83cc290f6c7340eb8d470dbbe8 416 Pfam PF00668 Condensation domain 2 286 1.7E-23 T 11-11-2016 IPR001242 Condensation domain S40542_RS13310 4e506c83cc290f6c7340eb8d470dbbe8 416 SUPERFAMILY SSF52777 183 415 1.67E-24 T 11-11-2016 S40542_RS13310 4e506c83cc290f6c7340eb8d470dbbe8 416 SUPERFAMILY SSF52777 7 177 4.3E-18 T 11-11-2016 S40542_RS03390 f071ce427529d820741add6b8fac26ac 670 Pfam PF00672 HAMP domain 319 387 1.2E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS03390 f071ce427529d820741add6b8fac26ac 670 SMART SM00304 338 391 1.1E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS03390 f071ce427529d820741add6b8fac26ac 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 460 666 2.8E-51 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS03390 f071ce427529d820741add6b8fac26ac 670 Gene3D G3DSA:1.10.287.950 422 636 1.8E-56 T 11-11-2016 S40542_RS03390 f071ce427529d820741add6b8fac26ac 670 SMART SM00283 406 667 6.6E-80 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS03390 f071ce427529d820741add6b8fac26ac 670 SUPERFAMILY SSF58104 365 668 8.89E-76 T 11-11-2016 S40542_RS06965 9c2713829a03cd357f2d2d2c68f6b104 334 SUPERFAMILY SSF52540 12 175 2.29E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06965 9c2713829a03cd357f2d2d2c68f6b104 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 175 6.8E-41 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain S40542_RS06965 9c2713829a03cd357f2d2d2c68f6b104 334 Gene3D G3DSA:3.40.50.300 10 204 2.6E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.6E-13 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 5.9E-25 T 11-11-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 6.1E-148 T 11-11-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 Gene3D G3DSA:1.10.166.10 1 70 4.1E-30 T 11-11-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.904 T 11-11-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 Gene3D G3DSA:2.160.10.10 89 255 1.7E-60 T 11-11-2016 S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 166 0.0019 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS06600 0ef837e84cc22bad4186226fb143dcb8 275 SUPERFAMILY SSF51161 2 256 1.52E-75 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS00370 119737ff195c892750d7a38a7ddf37e7 943 SUPERFAMILY SSF82171 377 558 1.45E-10 T 11-11-2016 S40542_RS00370 119737ff195c892750d7a38a7ddf37e7 943 SUPERFAMILY SSF82171 294 331 1.45E-10 T 11-11-2016 S40542_RS00370 119737ff195c892750d7a38a7ddf37e7 943 Gene3D G3DSA:2.120.10.30 297 342 1.6E-12 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS00370 119737ff195c892750d7a38a7ddf37e7 943 Gene3D G3DSA:2.120.10.30 375 563 1.6E-12 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS13695 b720c277e764ed313bed6c9465534dcb 353 Pfam PF16261 Domain of unknown function (DUF4915) 1 334 2.2E-86 T 11-11-2016 IPR017481 Conserved hypothetical protein CHP03032 S40542_RS13695 b720c277e764ed313bed6c9465534dcb 353 SUPERFAMILY SSF63825 7 52 1.28E-14 T 11-11-2016 S40542_RS13695 b720c277e764ed313bed6c9465534dcb 353 SUPERFAMILY SSF63825 105 329 1.28E-14 T 11-11-2016 S40542_RS13695 b720c277e764ed313bed6c9465534dcb 353 TIGRFAM TIGR03032 TIGR03032: TIGR03032 family protein 1 341 1.9E-89 T 11-11-2016 IPR017481 Conserved hypothetical protein CHP03032 S40542_RS13695 b720c277e764ed313bed6c9465534dcb 353 Gene3D G3DSA:2.130.10.10 223 325 5.0E-7 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS13695 b720c277e764ed313bed6c9465534dcb 353 Gene3D G3DSA:2.130.10.10 5 185 5.0E-7 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS10300 b92aea9657e49ba011f97b4f5e23ad9c 975 Pfam PF13711 Domain of unknown function (DUF4160) 901 952 5.0E-5 T 11-11-2016 IPR025427 Protein of unknown function DUF4160 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 Gene3D G3DSA:3.30.9.10 245 341 6.3E-18 T 11-11-2016 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 SUPERFAMILY SSF51905 3 56 9.5E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 SUPERFAMILY SSF51905 89 256 9.5E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 SUPERFAMILY SSF51905 343 401 9.5E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 SUPERFAMILY SSF54373 256 343 6.8E-18 T 11-11-2016 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 Gene3D G3DSA:3.50.50.60 3 57 2.5E-57 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 Gene3D G3DSA:3.50.50.60 173 244 2.5E-57 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 Gene3D G3DSA:3.50.50.60 343 402 2.5E-57 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 Gene3D G3DSA:3.50.50.60 92 114 2.5E-57 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS17830 9b6798a27b2ce2fc49cb540440033f35 405 Pfam PF01266 FAD dependent oxidoreductase 5 382 4.3E-61 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 S40542_RS20325 bf005ef03b418574267b9286484c7e45 431 SUPERFAMILY SSF53474 112 300 5.13E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS20325 bf005ef03b418574267b9286484c7e45 431 Pfam PF12146 Serine aminopeptidase, S33 120 241 1.5E-12 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 S40542_RS20325 bf005ef03b418574267b9286484c7e45 431 Gene3D G3DSA:3.40.50.1820 112 299 2.7E-22 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 425 1.0E-67 T 11-11-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 249 259 1.2E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 409 426 1.2E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.2E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 220 234 1.2E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.2E-26 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 11-11-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 Gene3D G3DSA:1.10.940.10 2 146 1.4E-44 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 Gene3D G3DSA:1.10.287.730 147 168 5.1E-9 T 11-11-2016 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 SUPERFAMILY SSF48013 3 147 5.63E-36 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 Gene3D G3DSA:3.30.70.1170 171 228 2.3E-19 T 11-11-2016 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 SUPERFAMILY SSF53335 138 426 8.06E-71 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 Gene3D G3DSA:3.40.50.150 230 426 2.5E-56 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 Pfam PF01029 NusB family 3 124 1.7E-24 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 S40542_RS00085 a8abda5cca751d6211e68d4eaf43e135 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 5 426 1.0E-141 T 11-11-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS07235 41519333abba6b1627417f4c152fe649 377 SUPERFAMILY SSF46689 322 372 3.72E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS07235 41519333abba6b1627417f4c152fe649 377 SMART SM00342 286 369 1.5E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS07235 41519333abba6b1627417f4c152fe649 377 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 369 1.6E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS07235 41519333abba6b1627417f4c152fe649 377 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 338 353 1.6E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS07235 41519333abba6b1627417f4c152fe649 377 Pfam PF12833 Helix-turn-helix domain 292 371 5.4E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS07235 41519333abba6b1627417f4c152fe649 377 Gene3D G3DSA:1.10.10.60 322 371 1.8E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS05875 ebd9e5300525fbd661ae1a76f7e55c4c 478 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 229 1.1E-65 T 11-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 S40542_RS05875 ebd9e5300525fbd661ae1a76f7e55c4c 478 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 232 448 1.0E-48 T 11-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 S40542_RS05875 ebd9e5300525fbd661ae1a76f7e55c4c 478 Gene3D G3DSA:1.20.1250.20 240 445 1.4E-9 T 11-11-2016 S40542_RS05875 ebd9e5300525fbd661ae1a76f7e55c4c 478 Gene3D G3DSA:1.20.1250.20 17 209 8.6E-24 T 11-11-2016 S40542_RS05875 ebd9e5300525fbd661ae1a76f7e55c4c 478 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 76 100 - T 11-11-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 S40542_RS05875 ebd9e5300525fbd661ae1a76f7e55c4c 478 Pfam PF00854 POT family 239 417 1.2E-31 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 S40542_RS05875 ebd9e5300525fbd661ae1a76f7e55c4c 478 Pfam PF00854 POT family 88 203 8.2E-29 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 S40542_RS05875 ebd9e5300525fbd661ae1a76f7e55c4c 478 SUPERFAMILY SSF103473 11 448 1.83E-45 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS09415 1c71e262734e6104a391aea813916e02 441 SMART SM00155 342 369 46.0 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 S40542_RS09415 1c71e262734e6104a391aea813916e02 441 SMART SM00155 122 148 0.0046 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 S40542_RS09415 1c71e262734e6104a391aea813916e02 441 SUPERFAMILY SSF56024 244 383 3.77E-14 T 11-11-2016 S40542_RS09415 1c71e262734e6104a391aea813916e02 441 PIRSF PIRSF000850 3 441 2.4E-156 T 11-11-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|Reactome: R-HSA-1483148 S40542_RS09415 1c71e262734e6104a391aea813916e02 441 Gene3D G3DSA:3.30.870.10 17 185 2.9E-14 T 11-11-2016 S40542_RS09415 1c71e262734e6104a391aea813916e02 441 Gene3D G3DSA:3.30.870.10 241 386 2.4E-11 T 11-11-2016 S40542_RS09415 1c71e262734e6104a391aea813916e02 441 Pfam PF13091 PLD-like domain 31 142 4.6E-7 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 S40542_RS09415 1c71e262734e6104a391aea813916e02 441 Pfam PF13091 PLD-like domain 250 386 1.7E-14 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 S40542_RS09415 1c71e262734e6104a391aea813916e02 441 SUPERFAMILY SSF56024 9 187 7.85E-27 T 11-11-2016 S40542_RS19700 a3899483d5e730c47d0d027b528458a2 543 Pfam PF04231 Endonuclease I 302 537 4.8E-93 T 11-11-2016 IPR007346 Endonuclease I GO:0004518 S40542_RS19700 a3899483d5e730c47d0d027b528458a2 543 SUPERFAMILY SSF49785 27 164 2.04E-19 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS19700 a3899483d5e730c47d0d027b528458a2 543 Gene3D G3DSA:2.60.120.260 26 164 7.3E-17 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS19700 a3899483d5e730c47d0d027b528458a2 543 SUPERFAMILY SSF54060 299 537 1.18E-44 T 11-11-2016 S40542_RS11770 f951fc056db23669b017188c5c772d05 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 7.5E-21 T 11-11-2016 IPR021249 Protein of unknown function DUF2788 S40542_RS10000 b79a0ebef8110bbb9368f71018caa63f 328 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 255 46.227 T 11-11-2016 IPR020936 Uncharacterised protein family UPF0176 S40542_RS10000 b79a0ebef8110bbb9368f71018caa63f 328 Pfam PF00581 Rhodanese-like domain 117 211 5.7E-9 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS10000 b79a0ebef8110bbb9368f71018caa63f 328 SUPERFAMILY SSF52821 95 242 1.37E-31 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS10000 b79a0ebef8110bbb9368f71018caa63f 328 Gene3D G3DSA:3.40.250.10 102 227 1.8E-42 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS10000 b79a0ebef8110bbb9368f71018caa63f 328 SMART SM00450 114 215 1.0E-21 T 11-11-2016 IPR001763 Rhodanese-like domain S40542_RS01815 1ba3252715b05dda795b81c5fda688f3 327 SMART SM00244 66 246 0.0012 T 11-11-2016 IPR001107 Band 7 domain S40542_RS01815 1ba3252715b05dda795b81c5fda688f3 327 Pfam PF01145 SPFH domain / Band 7 family 70 266 1.8E-19 T 11-11-2016 IPR001107 Band 7 domain S40542_RS01815 1ba3252715b05dda795b81c5fda688f3 327 SUPERFAMILY SSF117892 102 242 2.22E-9 T 11-11-2016 IPR001107 Band 7 domain S40542_RS08910 c8f3f42cc725c145eaffe46952f1771e 669 SUPERFAMILY SSF53335 468 595 6.09E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS08910 c8f3f42cc725c145eaffe46952f1771e 669 Gene3D G3DSA:3.40.50.150 412 606 6.0E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 80 98 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 75 91 0.007 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 56 73 2.7E-4 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 38 55 0.005 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 93 108 52.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 PRINTS PR00313 NodO calcium binding signature 36 47 4.4E-10 T 11-11-2016 S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 PRINTS PR00313 NodO calcium binding signature 102 111 4.4E-10 T 11-11-2016 S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 PRINTS PR00313 NodO calcium binding signature 84 92 4.4E-10 T 11-11-2016 S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 PRINTS PR00313 NodO calcium binding signature 66 74 4.4E-10 T 11-11-2016 S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 53 71 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 44 62 - T 11-11-2016 IPR018511 Hemolysin-type calcium-binding conserved site S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 Gene3D G3DSA:2.150.10.10 27 109 1.0E-22 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS13955 9923a2e22f45c27deae28f2980cb4533 124 SUPERFAMILY SSF51120 27 108 1.09E-21 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS00920 aae177a88e5407019a7a5d289b6c3983 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.8E-56 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 S40542_RS00920 aae177a88e5407019a7a5d289b6c3983 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 28.426 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 S40542_RS00920 aae177a88e5407019a7a5d289b6c3983 122 SMART SM01374 1 122 7.4E-87 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 S40542_RS00920 aae177a88e5407019a7a5d289b6c3983 122 SUPERFAMILY SSF50193 1 122 2.22E-52 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 S40542_RS00920 aae177a88e5407019a7a5d289b6c3983 122 Gene3D G3DSA:2.40.150.20 1 122 1.2E-55 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 S40542_RS00920 aae177a88e5407019a7a5d289b6c3983 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-11-2016 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 S40542_RS00920 aae177a88e5407019a7a5d289b6c3983 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.1E-59 T 11-11-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 S40542_RS03415 c832e6536d12273ab07109ad766deda0 246 Gene3D G3DSA:3.10.20.30 17 74 1.9E-6 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS03415 c832e6536d12273ab07109ad766deda0 246 Pfam PF14451 Mut7-C ubiquitin 2 78 2.5E-18 T 11-11-2016 IPR027798 Ubiquitin Mut7-C domain S40542_RS03415 c832e6536d12273ab07109ad766deda0 246 Pfam PF01927 Mut7-C RNAse domain 95 237 4.6E-40 T 11-11-2016 IPR002782 Mut7-C RNAse domain S40542_RS07715 a698d2c6c82b276d90768420c1e818c6 239 SUPERFAMILY SSF53448 1 184 3.38E-40 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS07715 a698d2c6c82b276d90768420c1e818c6 239 Gene3D G3DSA:3.90.550.10 1 180 9.1E-31 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS07715 a698d2c6c82b276d90768420c1e818c6 239 Pfam PF00535 Glycosyl transferase family 2 4 108 1.4E-22 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 Gene3D G3DSA:3.40.220.10 32 164 6.6E-24 T 11-11-2016 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 Gene3D G3DSA:3.40.630.10 186 501 2.1E-114 T 11-11-2016 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 196 496 1.1E-106 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 SUPERFAMILY SSF53187 191 501 1.7E-103 T 11-11-2016 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 354 361 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 SUPERFAMILY SSF52949 33 166 1.29E-22 T 11-11-2016 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 39 162 1.7E-23 T 11-11-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 PRINTS PR00481 Cytosol aminopeptidase signature 269 286 3.8E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 PRINTS PR00481 Cytosol aminopeptidase signature 350 370 3.8E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 PRINTS PR00481 Cytosol aminopeptidase signature 328 349 3.8E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 PRINTS PR00481 Cytosol aminopeptidase signature 291 312 3.8E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 PRINTS PR00481 Cytosol aminopeptidase signature 379 394 3.8E-45 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 S40542_RS10215 8595c1db03daae0ff9acf24956baadda 504 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 22 504 30.705 T 11-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 S40542_RS15770 a1afd6a8c4336150c579856d4f903e06 101 Gene3D G3DSA:3.30.750.24 9 100 5.1E-22 T 11-11-2016 IPR002645 STAS domain S40542_RS15770 a1afd6a8c4336150c579856d4f903e06 101 SUPERFAMILY SSF52091 6 100 1.47E-21 T 11-11-2016 IPR002645 STAS domain S40542_RS15770 a1afd6a8c4336150c579856d4f903e06 101 Pfam PF13466 STAS domain 16 95 9.8E-12 T 11-11-2016 IPR002645 STAS domain S40542_RS15770 a1afd6a8c4336150c579856d4f903e06 101 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 3 100 3.1E-16 T 11-11-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 S40542_RS19335 7caee3579b0a0f176a8cd3effde7887d 337 SUPERFAMILY SSF51395 21 315 1.1E-71 T 11-11-2016 S40542_RS19335 7caee3579b0a0f176a8cd3effde7887d 337 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 20 335 1.0E-147 T 11-11-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 S40542_RS19335 7caee3579b0a0f176a8cd3effde7887d 337 Gene3D G3DSA:3.20.20.70 20 261 9.1E-75 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS19335 7caee3579b0a0f176a8cd3effde7887d 337 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 14 336 50.67 T 11-11-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 S40542_RS19335 7caee3579b0a0f176a8cd3effde7887d 337 PIRSF PIRSF006621 12 334 7.8E-71 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS19335 7caee3579b0a0f176a8cd3effde7887d 337 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS19335 7caee3579b0a0f176a8cd3effde7887d 337 Pfam PF01207 Dihydrouridine synthase (Dus) 24 330 3.2E-86 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 S40542_RS12745 e45af7e61ff4cc032e9f2d9b32199d5e 144 SUPERFAMILY SSF55729 5 143 1.23E-26 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12745 e45af7e61ff4cc032e9f2d9b32199d5e 144 Gene3D G3DSA:3.40.630.30 14 142 9.1E-28 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12745 e45af7e61ff4cc032e9f2d9b32199d5e 144 Pfam PF13673 Acetyltransferase (GNAT) domain 23 144 4.8E-17 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS02545 a541bde32bc791c9f2dd087c9ada10f6 187 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 162 2.0E-11 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 S40542_RS02545 a541bde32bc791c9f2dd087c9ada10f6 187 SUPERFAMILY SSF101327 6 173 2.35E-38 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 S40542_RS02545 a541bde32bc791c9f2dd087c9ada10f6 187 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 174 3.6E-34 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 S40542_RS07635 9f03b7fb2541482c733e68696fb7c941 323 SMART SM01321 12 187 7.7E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07635 9f03b7fb2541482c733e68696fb7c941 323 Gene3D G3DSA:3.30.70.1290 16 82 3.2E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07635 9f03b7fb2541482c733e68696fb7c941 323 Gene3D G3DSA:3.30.70.1290 135 190 3.2E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07635 9f03b7fb2541482c733e68696fb7c941 323 SUPERFAMILY SSF143422 15 81 3.92E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07635 9f03b7fb2541482c733e68696fb7c941 323 SUPERFAMILY SSF143422 134 193 3.92E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS19020 4a8ffb3d480d7a77aa1bf09d4367130f 177 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 165 1.4E-34 T 11-11-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 S40542_RS19020 4a8ffb3d480d7a77aa1bf09d4367130f 177 Gene3D G3DSA:2.60.450.10 26 162 1.3E-26 T 11-11-2016 S40542_RS19020 4a8ffb3d480d7a77aa1bf09d4367130f 177 Pfam PF03968 OstA-like protein 34 145 3.9E-21 T 11-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal S40542_RS14590 8c6ebe675ebfa3816f7731279b73441d 347 Pfam PF02445 Quinolinate synthetase A protein 32 340 1.4E-102 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 S40542_RS14590 8c6ebe675ebfa3816f7731279b73441d 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 27 342 2.6E-115 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 S40542_RS14590 8c6ebe675ebfa3816f7731279b73441d 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 68.589 T 11-11-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 S40542_RS14590 8c6ebe675ebfa3816f7731279b73441d 347 SUPERFAMILY SSF142754 28 341 4.71E-107 T 11-11-2016 S40542_RS11315 a15408e4a030fa117c9666611f582836 191 SMART SM00867 24 189 3.2E-70 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like S40542_RS11315 a15408e4a030fa117c9666611f582836 191 Gene3D G3DSA:2.40.128.110 22 190 4.1E-57 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like S40542_RS11315 a15408e4a030fa117c9666611f582836 191 Pfam PF04264 YceI-like domain 25 187 3.4E-39 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like S40542_RS11315 a15408e4a030fa117c9666611f582836 191 SUPERFAMILY SSF101874 22 190 3.66E-53 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like S40542_RS19075 c66b5c9240374148698376364fc72dda 275 Pfam PF00795 Carbon-nitrogen hydrolase 39 236 2.3E-42 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS19075 c66b5c9240374148698376364fc72dda 275 SUPERFAMILY SSF56317 4 267 5.23E-65 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS19075 c66b5c9240374148698376364fc72dda 275 Gene3D G3DSA:3.60.110.10 4 270 2.8E-66 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS20070 f17c03e4791282bedd179016912299e0 258 SUPERFAMILY SSF81901 180 243 6.02E-7 T 11-11-2016 S40542_RS20070 f17c03e4791282bedd179016912299e0 258 Gene3D G3DSA:1.25.40.10 158 248 1.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07400 8e69f9fce7ff807fcb00867cdc07f4c1 775 SUPERFAMILY SSF56935 30 470 4.88E-107 T 11-11-2016 S40542_RS07400 8e69f9fce7ff807fcb00867cdc07f4c1 775 SUPERFAMILY SSF56935 519 775 4.88E-107 T 11-11-2016 S40542_RS07400 8e69f9fce7ff807fcb00867cdc07f4c1 775 Gene3D G3DSA:2.170.130.10 30 163 1.3E-24 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07400 8e69f9fce7ff807fcb00867cdc07f4c1 775 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 155 2.8E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS07400 8e69f9fce7ff807fcb00867cdc07f4c1 775 Gene3D G3DSA:2.40.170.20 167 465 6.7E-85 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07400 8e69f9fce7ff807fcb00867cdc07f4c1 775 Gene3D G3DSA:2.40.170.20 515 775 6.7E-85 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07400 8e69f9fce7ff807fcb00867cdc07f4c1 775 Pfam PF00593 TonB dependent receptor 529 774 5.9E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS05430 4bf107c511b16962c97640121b02a14a 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 34.947 T 11-11-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 S40542_RS05430 4bf107c511b16962c97640121b02a14a 302 Pfam PF04381 Putative exonuclease, RdgC 1 298 1.6E-109 T 11-11-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 S40542_RS07365 25b20d0ac1ffb5e895c48e0ef9c0b3d3 292 Gene3D G3DSA:3.40.190.10 111 179 4.9E-8 T 11-11-2016 S40542_RS07365 25b20d0ac1ffb5e895c48e0ef9c0b3d3 292 SUPERFAMILY SSF46785 4 85 1.91E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS07365 25b20d0ac1ffb5e895c48e0ef9c0b3d3 292 Pfam PF03466 LysR substrate binding domain 92 291 2.5E-26 T 11-11-2016 IPR005119 LysR, substrate-binding S40542_RS07365 25b20d0ac1ffb5e895c48e0ef9c0b3d3 292 SUPERFAMILY SSF53850 92 291 3.98E-26 T 11-11-2016 S40542_RS07365 25b20d0ac1ffb5e895c48e0ef9c0b3d3 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.1E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 S40542_RS07365 25b20d0ac1ffb5e895c48e0ef9c0b3d3 292 Gene3D G3DSA:3.40.190.10 180 255 8.2E-15 T 11-11-2016 S40542_RS07365 25b20d0ac1ffb5e895c48e0ef9c0b3d3 292 Gene3D G3DSA:1.10.10.10 2 85 1.5E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 Gene3D G3DSA:3.40.640.10 94 304 1.3E-9 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 Gene3D G3DSA:3.40.640.10 508 749 1.9E-43 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 19 957 0.0 T 11-11-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 Pfam PF02347 Glycine cleavage system P-protein 18 442 9.7E-179 T 11-11-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 Pfam PF02347 Glycine cleavage system P-protein 481 753 2.9E-11 T 11-11-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 SUPERFAMILY SSF53383 464 893 4.62E-103 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 SUPERFAMILY SSF53383 936 958 4.62E-103 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 SUPERFAMILY SSF53383 19 443 1.0E-94 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS02585 2d7c36651637e6c463ce45d2d7739bd5 965 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 10 963 25.219 T 11-11-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 Gene3D G3DSA:1.10.10.60 355 373 1.9E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 Gene3D G3DSA:1.10.10.60 408 460 1.9E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 Pfam PF02954 Bacterial regulatory protein, Fis family 423 459 8.6E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 463 6.4E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 443 6.4E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 Gene3D G3DSA:1.10.8.60 301 354 6.4E-23 T 11-11-2016 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 SUPERFAMILY SSF46689 341 460 1.52E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 Gene3D G3DSA:3.40.50.2300 2 124 8.9E-36 T 11-11-2016 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 Gene3D G3DSA:3.40.50.300 132 300 2.0E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 SMART SM00382 148 292 1.1E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 Pfam PF00158 Sigma-54 interaction domain 133 294 2.3E-65 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 Pfam PF00072 Response regulator receiver domain 5 114 7.2E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 SUPERFAMILY SSF52540 137 369 9.46E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 SUPERFAMILY SSF52172 4 172 4.84E-41 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS06360 522f775dd0e2fb42bdd2fb674161242c 469 SMART SM00448 3 114 9.7E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15615 a17e29cf86c56f6ad69ac762a67b733d 149 PIRSF PIRSF004923 1 141 7.2E-22 T 11-11-2016 IPR026268 Protein RseC S40542_RS15615 a17e29cf86c56f6ad69ac762a67b733d 149 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 130 1.3E-22 T 11-11-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC S40542_RS04235 975d9fec4ea8135bdc7d8e5229bb5acb 355 SUPERFAMILY SSF56112 6 343 2.33E-31 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS04235 975d9fec4ea8135bdc7d8e5229bb5acb 355 Pfam PF01636 Phosphotransferase enzyme family 24 256 1.3E-18 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase S40542_RS04235 975d9fec4ea8135bdc7d8e5229bb5acb 355 Gene3D G3DSA:3.90.1200.10 138 341 2.1E-18 T 11-11-2016 S40542_RS09955 d58191af4e8bbf227e8010e009ebd24b 134 Gene3D G3DSA:3.40.50.2300 3 124 3.7E-24 T 11-11-2016 S40542_RS09955 d58191af4e8bbf227e8010e009ebd24b 134 SMART SM00448 2 119 7.3E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09955 d58191af4e8bbf227e8010e009ebd24b 134 Pfam PF00072 Response regulator receiver domain 5 119 6.4E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09955 d58191af4e8bbf227e8010e009ebd24b 134 SUPERFAMILY SSF52172 1 130 1.05E-24 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS10160 2a5f19911608158759e11a0a0dd66cf6 321 SUPERFAMILY SSF53850 26 314 2.99E-32 T 11-11-2016 S40542_RS10160 2a5f19911608158759e11a0a0dd66cf6 321 Gene3D G3DSA:3.40.190.100 113 237 1.7E-13 T 11-11-2016 S40542_RS10160 2a5f19911608158759e11a0a0dd66cf6 321 Gene3D G3DSA:3.40.190.10 247 314 3.6E-15 T 11-11-2016 S40542_RS10160 2a5f19911608158759e11a0a0dd66cf6 321 Gene3D G3DSA:3.40.190.10 27 111 3.6E-15 T 11-11-2016 S40542_RS10160 2a5f19911608158759e11a0a0dd66cf6 321 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 300 9.6E-25 T 11-11-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SMART SM00634 694 790 0.15 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SMART SM00634 150 240 0.089 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SMART SM00634 471 566 0.55 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SMART SM00634 42 132 0.15 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SMART SM00634 368 457 0.86 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SMART SM00634 817 901 0.48 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SUPERFAMILY SSF49373 273 339 5.49E-6 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SUPERFAMILY SSF49373 714 793 1.28E-8 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SUPERFAMILY SSF49373 494 568 1.54E-7 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 968 1031 2.2E-4 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 158 237 2.7E-8 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 59 132 5.6E-4 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 715 786 4.7E-7 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 1178 1241 1.8E-5 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 386 458 5.8E-6 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 273 336 6.0E-5 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 828 895 6.2E-7 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 Gene3D G3DSA:2.60.40.920 496 571 1.1E-5 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SUPERFAMILY SSF49373 823 897 8.89E-7 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SUPERFAMILY SSF49373 50 134 5.49E-6 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SUPERFAMILY SSF49373 968 1032 7.85E-5 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SUPERFAMILY SSF49373 163 238 1.12E-8 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments S40542_RS11435 7e6d77e68740e7ad6681f14e1f259294 1750 SUPERFAMILY SSF49373 386 458 2.71E-6 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments S40542_RS14845 d16eff5653ce8bdcb18e861fe4bec1d5 328 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 6.0E-172 T 11-11-2016 IPR015004 Protein of unknown function DUF1852 S40542_RS14845 d16eff5653ce8bdcb18e861fe4bec1d5 328 PIRSF PIRSF034367 1 325 5.1E-177 T 11-11-2016 IPR015004 Protein of unknown function DUF1852 S40542_RS12690 d4181de73b47d367a9fa7bbf4ff33fb6 136 Pfam PF10990 Protein of unknown function (DUF2809) 32 115 1.2E-23 T 11-11-2016 IPR021257 Protein of unknown function DUF2809 S40542_RS10510 864b4b1c49c9d10f7c3b7a1f69f07888 156 Pfam PF07030 Protein of unknown function (DUF1320) 57 136 1.7E-7 T 11-11-2016 IPR009752 Bacteriophage Mu, Gp36 S40542_RS07275 7202644539da7ebf5a647b243bd47b61 390 Pfam PF13533 Biotin-lipoyl like 80 129 3.4E-5 T 11-11-2016 S40542_RS07275 7202644539da7ebf5a647b243bd47b61 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 65 374 1.2E-34 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS07275 7202644539da7ebf5a647b243bd47b61 390 Pfam PF13437 HlyD family secretion protein 192 284 3.0E-5 T 11-11-2016 S40542_RS07275 7202644539da7ebf5a647b243bd47b61 390 Gene3D G3DSA:2.40.50.100 188 220 9.6E-8 T 11-11-2016 S40542_RS07275 7202644539da7ebf5a647b243bd47b61 390 Gene3D G3DSA:2.40.50.100 80 114 9.6E-8 T 11-11-2016 S40542_RS07275 7202644539da7ebf5a647b243bd47b61 390 SUPERFAMILY SSF111369 68 236 1.44E-17 T 11-11-2016 S40542_RS20245 a4f2a6ba6802476631d5c8086ea9ba78 164 SUPERFAMILY SSF52833 6 155 2.02E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS20245 a4f2a6ba6802476631d5c8086ea9ba78 164 Pfam PF08534 Redoxin 35 153 4.1E-10 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 S40542_RS20245 a4f2a6ba6802476631d5c8086ea9ba78 164 Gene3D G3DSA:3.40.30.10 3 156 5.4E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS19760 9172fd8a32272b1670dcaa22b317d70f 440 SUPERFAMILY SSF52777 199 423 4.0E-19 T 11-11-2016 S40542_RS19760 9172fd8a32272b1670dcaa22b317d70f 440 Pfam PF00668 Condensation domain 5 277 2.1E-37 T 11-11-2016 IPR001242 Condensation domain S40542_RS19760 9172fd8a32272b1670dcaa22b317d70f 440 SUPERFAMILY SSF52777 7 169 5.67E-28 T 11-11-2016 S40542_RS09325 66c3efbe5ce3d23d7390bd5179c212db 91 SUPERFAMILY SSF52091 5 82 4.32E-8 T 11-11-2016 IPR002645 STAS domain S40542_RS09325 66c3efbe5ce3d23d7390bd5179c212db 91 Gene3D G3DSA:3.30.750.24 4 83 3.7E-7 T 11-11-2016 IPR002645 STAS domain S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 226 241 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 SUPERFAMILY SSF50621 256 414 1.61E-52 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 6.5E-28 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 6.5E-28 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 371 384 6.5E-28 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 6.5E-28 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 6.5E-28 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 Gene3D G3DSA:2.40.37.10 268 415 5.0E-48 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 286 391 1.0E-17 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 414 41.296 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 4.5E-30 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01181 Diaminopimelate decarboxylase signature 381 403 4.5E-30 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 4.5E-30 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 4.5E-30 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 413 2.1E-160 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 Gene3D G3DSA:3.20.20.10 36 267 1.3E-85 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 11-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 3.5E-74 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 S40542_RS20135 90d70aaebb238b73d07df3ba2c68dd4c 418 SUPERFAMILY SSF51419 26 283 2.36E-84 T 11-11-2016 IPR029066 PLP-binding barrel S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 9.6E-125 T 11-11-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 SUPERFAMILY SSF160544 244 351 6.15E-41 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 Gene3D G3DSA:3.40.1690.10 217 356 5.3E-63 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.2E-38 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.2E-38 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.2E-38 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.2E-38 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.2E-38 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 S40542_RS06435 5fb8955953b9a01964cdf072c564ffaa 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.9E-122 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 S40542_RS17875 d6aeb30b4d187c506b6e0be83327a9bd 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 214 5.4E-22 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 S40542_RS17875 d6aeb30b4d187c506b6e0be83327a9bd 255 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 11-11-2016 IPR000540 Flagellar motor protein MotA, conserved site S40542_RS00430 c6e03d8018fa0f12b47a8e20dfe108e6 201 Pfam PF07819 PGAP1-like protein 63 125 2.2E-10 T 11-11-2016 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 S40542_RS00430 c6e03d8018fa0f12b47a8e20dfe108e6 201 SUPERFAMILY SSF53474 6 193 9.17E-20 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00430 c6e03d8018fa0f12b47a8e20dfe108e6 201 Gene3D G3DSA:3.40.50.1820 49 199 1.4E-22 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS09660 122d967f2bec9eddbba5422cfbe8bb74 337 Pfam PF02371 Transposase IS116/IS110/IS902 family 208 285 3.6E-12 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 S40542_RS09660 122d967f2bec9eddbba5422cfbe8bb74 337 Pfam PF01548 Transposase 8 147 1.1E-12 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 S40542_RS02205 122d967f2bec9eddbba5422cfbe8bb74 337 Pfam PF02371 Transposase IS116/IS110/IS902 family 208 285 3.6E-12 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 S40542_RS02205 122d967f2bec9eddbba5422cfbe8bb74 337 Pfam PF01548 Transposase 8 147 1.1E-12 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 S40542_RS02160 5dd600f7afb6930fc920e142cc464711 365 SUPERFAMILY SSF53335 10 364 3.86E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS02160 5dd600f7afb6930fc920e142cc464711 365 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 347 357 - T 11-11-2016 IPR030391 RNA methyltransferase TrmA, conserved site S40542_RS02160 5dd600f7afb6930fc920e142cc464711 365 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 2.2E-168 T 11-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 S40542_RS02160 5dd600f7afb6930fc920e142cc464711 365 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 365 42.553 T 11-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 S40542_RS02160 5dd600f7afb6930fc920e142cc464711 365 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 5.6E-168 T 11-11-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 S40542_RS02160 5dd600f7afb6930fc920e142cc464711 365 Gene3D G3DSA:3.40.50.150 154 364 5.9E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS02160 5dd600f7afb6930fc920e142cc464711 365 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 298 327 - T 11-11-2016 IPR030390 RNA methyltransferase TrmA, active site S40542_RS07835 f4d9659b2d3fd9b80821f9a7ef3d96e6 207 Pfam PF01810 LysE type translocator 13 188 4.9E-18 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS01495 e803a2e63c8531f9ac75398b97121e9d 87 Pfam PF04380 Membrane fusogenic activity 1 78 2.1E-25 T 11-11-2016 IPR007475 Membrane fusogenic activity S40542_RS19575 74e7f5befb32e9d872a1d87f2ae00921 244 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 7 220 2.4E-55 T 11-11-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 S40542_RS19575 74e7f5befb32e9d872a1d87f2ae00921 244 PIRSF PIRSF001357 1 243 8.6E-64 T 11-11-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 S40542_RS19575 74e7f5befb32e9d872a1d87f2ae00921 244 Gene3D G3DSA:3.20.20.70 4 240 2.6E-75 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS19575 74e7f5befb32e9d872a1d87f2ae00921 244 SMART SM01133 6 239 7.8E-55 T 11-11-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 S40542_RS19575 74e7f5befb32e9d872a1d87f2ae00921 244 SUPERFAMILY SSF51569 5 239 1.36E-67 T 11-11-2016 S40542_RS19575 74e7f5befb32e9d872a1d87f2ae00921 244 Pfam PF01791 DeoC/LacD family aldolase 8 202 3.1E-26 T 11-11-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 S40542_RS16140 e4a56f5581df37fde3e56b84860fe719 653 Gene3D G3DSA:3.50.50.60 29 58 5.6E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS16140 e4a56f5581df37fde3e56b84860fe719 653 Gene3D G3DSA:3.50.50.60 261 354 5.6E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS16140 e4a56f5581df37fde3e56b84860fe719 653 Gene3D G3DSA:3.50.50.60 524 576 5.6E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS16140 e4a56f5581df37fde3e56b84860fe719 653 Pfam PF01593 Flavin containing amine oxidoreductase 28 398 6.2E-17 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 S40542_RS16140 e4a56f5581df37fde3e56b84860fe719 653 SUPERFAMILY SSF51905 549 576 6.04E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS16140 e4a56f5581df37fde3e56b84860fe719 653 SUPERFAMILY SSF51905 16 376 6.04E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS16140 e4a56f5581df37fde3e56b84860fe719 653 Gene3D G3DSA:3.50.50.60 14 28 9.1E-5 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS16140 e4a56f5581df37fde3e56b84860fe719 653 Gene3D G3DSA:3.50.50.60 72 98 9.1E-5 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11740 67196938c06c5c77b2c29a3b34a83c1f 325 Pfam PF02780 Transketolase, C-terminal domain 195 314 1.5E-37 T 11-11-2016 IPR033248 Transketolase, C-terminal domain S40542_RS11740 67196938c06c5c77b2c29a3b34a83c1f 325 SMART SM00861 4 180 2.9E-63 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS11740 67196938c06c5c77b2c29a3b34a83c1f 325 SUPERFAMILY SSF52922 189 324 2.62E-41 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS11740 67196938c06c5c77b2c29a3b34a83c1f 325 Gene3D G3DSA:3.40.50.970 1 197 1.6E-85 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS11740 67196938c06c5c77b2c29a3b34a83c1f 325 SUPERFAMILY SSF52518 1 205 2.12E-69 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS11740 67196938c06c5c77b2c29a3b34a83c1f 325 Gene3D G3DSA:3.40.50.920 198 321 1.2E-45 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS11740 67196938c06c5c77b2c29a3b34a83c1f 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 4.1E-46 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain S40542_RS10195 f4bfdaabfb743c825b416a8db927340f 340 Pfam PF06166 Protein of unknown function (DUF979) 19 338 8.7E-119 T 11-11-2016 IPR009323 Protein of unknown function DUF979 S40542_RS07105 76c7260921ed452311124c9423d7c19a 388 Pfam PF11449 Putative, 10TM heavy-metal exporter 41 385 1.7E-124 T 11-11-2016 IPR021552 Putative, 10TM heavy-metal exporter S40542_RS09930 d4e8cad23b861f01dc55d6b5c6763672 293 SUPERFAMILY SSF53474 30 278 8.39E-41 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS09930 d4e8cad23b861f01dc55d6b5c6763672 293 Pfam PF00756 Putative esterase 39 228 1.6E-20 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS09930 d4e8cad23b861f01dc55d6b5c6763672 293 Gene3D G3DSA:3.40.50.1820 32 279 3.4E-52 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS24530 9f095cceb06471274749c5b9bde6f0e6 288 SMART SM00646 109 268 5.8E-59 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 S40542_RS24530 9f095cceb06471274749c5b9bde6f0e6 288 SUPERFAMILY SSF53187 195 272 4.08E-53 T 11-11-2016 S40542_RS24530 9f095cceb06471274749c5b9bde6f0e6 288 SUPERFAMILY SSF53187 47 143 4.08E-53 T 11-11-2016 S40542_RS24530 9f095cceb06471274749c5b9bde6f0e6 288 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 49 268 2.6E-48 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 S40542_RS24530 9f095cceb06471274749c5b9bde6f0e6 288 Gene3D G3DSA:3.40.630.40 196 272 2.1E-57 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 S40542_RS24530 9f095cceb06471274749c5b9bde6f0e6 288 Gene3D G3DSA:3.40.630.40 47 156 2.1E-57 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 S40542_RS10210 52fcbd7468aeaf037bbf4c7097b9d0af 218 SMART SM00796 4 202 1.4E-57 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D S40542_RS10210 52fcbd7468aeaf037bbf4c7097b9d0af 218 Gene3D G3DSA:3.30.1360.40 7 81 1.5E-4 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain S40542_RS10210 52fcbd7468aeaf037bbf4c7097b9d0af 218 Gene3D G3DSA:2.40.100.10 89 214 7.7E-45 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS10210 52fcbd7468aeaf037bbf4c7097b9d0af 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 1.1E-53 T 11-11-2016 IPR010016 KipI family S40542_RS10210 52fcbd7468aeaf037bbf4c7097b9d0af 218 SUPERFAMILY SSF50891 89 214 1.37E-41 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS10210 52fcbd7468aeaf037bbf4c7097b9d0af 218 Pfam PF02682 Allophanate hydrolase subunit 1 8 202 2.9E-57 T 11-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D S40542_RS10875 5722dbc0f16676a38e748097f176438e 229 Pfam PF07681 DoxX 24 122 7.0E-18 T 11-11-2016 IPR032808 DoxX family S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.534 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 Gene3D G3DSA:3.65.10.10 22 237 2.2E-69 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 Gene3D G3DSA:3.65.10.10 238 422 1.5E-67 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 2.1E-139 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 PIRSF PIRSF000505 1 426 4.2E-146 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 1.6E-144 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 S40542_RS09485 8b259b35f7f8123fbec4dfdd4fcaf162 426 SUPERFAMILY SSF55205 1 423 3.79E-134 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 Pfam PF13715 CarboxypepD_reg-like domain 32 119 1.1E-13 T 11-11-2016 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 Gene3D G3DSA:2.60.40.1120 31 109 2.3E-14 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 Gene3D G3DSA:2.170.130.10 133 240 3.9E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 SUPERFAMILY SSF56935 343 540 7.94E-93 T 11-11-2016 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 SUPERFAMILY SSF56935 107 307 7.94E-93 T 11-11-2016 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 SUPERFAMILY SSF56935 581 926 7.94E-93 T 11-11-2016 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 SUPERFAMILY SSF49464 31 108 1.33E-12 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 Pfam PF00593 TonB dependent receptor 671 926 1.4E-28 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 114 926 1.9E-169 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 Pfam PF07715 TonB-dependent Receptor Plug Domain 133 237 1.6E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 Gene3D G3DSA:2.40.170.20 602 926 2.8E-60 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 Gene3D G3DSA:2.40.170.20 241 306 2.8E-60 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS12435 f9613d696f3c06dc5bbbd6ab8d6e92c1 929 Gene3D G3DSA:2.40.170.20 342 555 2.8E-60 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS18155 6c8e89ee427addb06e31b723fbd90999 376 Gene3D G3DSA:3.20.20.105 1 363 7.2E-169 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 S40542_RS18155 6c8e89ee427addb06e31b723fbd90999 376 SUPERFAMILY SSF51713 1 362 1.57E-163 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 S40542_RS18155 6c8e89ee427addb06e31b723fbd90999 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 357 57.481 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 S40542_RS18155 6c8e89ee427addb06e31b723fbd90999 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 364 8.6E-165 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 S40542_RS18155 6c8e89ee427addb06e31b723fbd90999 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 359 4.9E-93 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 S40542_RS18155 6c8e89ee427addb06e31b723fbd90999 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 365 1.1E-172 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 S40542_RS12545 be278cd277900a60b60b80514fc35475 168 SUPERFAMILY SSF81342 7 165 6.36E-7 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 S40542_RS12545 be278cd277900a60b60b80514fc35475 168 Pfam PF01292 Prokaryotic cytochrome b561 5 166 1.7E-13 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 S40542_RS17930 6a46ca245fd67ea768cfe82263fb886c 276 SUPERFAMILY SSF161111 2 185 4.05E-48 T 11-11-2016 S40542_RS17930 6a46ca245fd67ea768cfe82263fb886c 276 Pfam PF01545 Cation efflux family 1 184 3.0E-36 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 S40542_RS17930 6a46ca245fd67ea768cfe82263fb886c 276 SUPERFAMILY SSF160240 188 267 1.7E-19 T 11-11-2016 S40542_RS17930 6a46ca245fd67ea768cfe82263fb886c 276 Gene3D G3DSA:3.30.70.1350 185 267 4.4E-23 T 11-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain S40542_RS17930 6a46ca245fd67ea768cfe82263fb886c 276 Gene3D G3DSA:1.20.1510.10 2 184 6.4E-41 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain S40542_RS17930 6a46ca245fd67ea768cfe82263fb886c 276 Pfam PF16916 Dimerisation domain of Zinc Transporter 188 266 4.8E-22 T 11-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain S40542_RS17930 6a46ca245fd67ea768cfe82263fb886c 276 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 1 266 2.2E-62 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 S40542_RS06525 1ad4e71654aff746f4aa3a2272c3cfcb 834 Pfam PF02120 Flagellar hook-length control protein FliK 745 816 6.7E-8 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 SUPERFAMILY SSF55347 175 484 1.5E-106 T 11-11-2016 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 Gene3D G3DSA:3.40.50.720 3 184 1.9E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 PIRSF PIRSF000110 1 487 6.2E-162 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 Gene3D G3DSA:3.30.360.10 185 483 3.9E-116 T 11-11-2016 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 175 181 - T 11-11-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 235 251 4.4E-46 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 4.4E-46 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 165 193 4.4E-46 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 217 234 4.4E-46 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 141 154 4.4E-46 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 SUPERFAMILY SSF51735 2 188 1.28E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 4 485 77.903 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 187 483 1.6E-109 T 11-11-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 5 484 4.4E-164 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS08705 784a6cad5bd0f5585e06c586cb526350 490 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 8 185 4.4E-50 T 11-11-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 S40542_RS10330 813aeba4c3c8d9e6fa03b0f1280b6281 233 Pfam PF04402 Protein of unknown function (DUF541) 29 229 2.2E-33 T 11-11-2016 IPR007497 Protein of unknown function DUF541 S40542_RS13780 e4f0ce6b1acc27063fead6ebe8c814d7 257 SMART SM00382 31 225 5.2E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS13780 e4f0ce6b1acc27063fead6ebe8c814d7 257 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS13780 e4f0ce6b1acc27063fead6ebe8c814d7 257 Gene3D G3DSA:3.40.50.300 2 222 2.2E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS13780 e4f0ce6b1acc27063fead6ebe8c814d7 257 SUPERFAMILY SSF52540 3 222 8.19E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS13780 e4f0ce6b1acc27063fead6ebe8c814d7 257 Pfam PF00005 ABC transporter 22 160 1.9E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS14505 9ca0f1a90676ee7c81b5f41866a9557c 577 PIRSF PIRSF000719 2 573 2.4E-196 T 11-11-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 S40542_RS14505 9ca0f1a90676ee7c81b5f41866a9557c 577 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 6 565 6.1E-218 T 11-11-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 S40542_RS14505 9ca0f1a90676ee7c81b5f41866a9557c 577 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 568 39.853 T 11-11-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 S40542_RS14505 9ca0f1a90676ee7c81b5f41866a9557c 577 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 1 567 0.0 T 11-11-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 S40542_RS00380 2c7f0bd92f07a487835688fc44d7f548 396 Pfam PF13437 HlyD family secretion protein 216 300 1.6E-9 T 11-11-2016 S40542_RS00380 2c7f0bd92f07a487835688fc44d7f548 396 Gene3D G3DSA:2.40.50.100 50 84 6.1E-4 T 11-11-2016 S40542_RS00380 2c7f0bd92f07a487835688fc44d7f548 396 Gene3D G3DSA:2.40.50.100 206 242 6.1E-4 T 11-11-2016 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 Gene3D G3DSA:3.40.1190.10 737 898 1.9E-5 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 SUPERFAMILY SSF48371 164 386 1.23E-6 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 Gene3D G3DSA:1.25.10.10 174 357 4.2E-4 T 11-11-2016 IPR011989 Armadillo-like helical S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 SUPERFAMILY SSF53623 832 929 2.75E-5 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 PRINTS PR01758 Capsule biosynthesis protein CapB signature 757 774 3.2E-11 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 PRINTS PR01758 Capsule biosynthesis protein CapB signature 842 857 3.2E-11 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 PRINTS PR01758 Capsule biosynthesis protein CapB signature 814 829 3.2E-11 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 PRINTS PR01758 Capsule biosynthesis protein CapB signature 965 982 3.2E-11 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 PRINTS PR01758 Capsule biosynthesis protein CapB signature 734 750 3.2E-11 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 S40542_RS05885 3a11fc5fb8c9aa3c5d9b1c2f6e63ed17 1366 PRINTS PR01758 Capsule biosynthesis protein CapB signature 901 918 3.2E-11 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 S40542_RS22445 a52beaf0adebd4d40452e923d69664d5 287 Gene3D G3DSA:3.40.50.980 2 122 8.3E-23 T 11-11-2016 S40542_RS22445 a52beaf0adebd4d40452e923d69664d5 287 SUPERFAMILY SSF56801 2 286 2.22E-65 T 11-11-2016 S40542_RS22445 a52beaf0adebd4d40452e923d69664d5 287 Gene3D G3DSA:2.30.38.10 123 200 1.9E-21 T 11-11-2016 S40542_RS22445 a52beaf0adebd4d40452e923d69664d5 287 Pfam PF00501 AMP-binding enzyme 3 211 2.9E-40 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS22445 a52beaf0adebd4d40452e923d69664d5 287 Gene3D G3DSA:3.30.300.30 205 286 1.2E-21 T 11-11-2016 S40542_RS08085 c2fbf5fe92cd52b5c5bd14a2c667d618 157 Gene3D G3DSA:3.40.50.1240 18 144 4.2E-11 T 11-11-2016 IPR029033 Histidine phosphatase superfamily S40542_RS08085 c2fbf5fe92cd52b5c5bd14a2c667d618 157 SUPERFAMILY SSF53254 23 145 1.05E-13 T 11-11-2016 IPR029033 Histidine phosphatase superfamily S40542_RS08085 c2fbf5fe92cd52b5c5bd14a2c667d618 157 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 23 85 9.4E-6 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 S40542_RS08850 f002386c5bab88f0ae5e443e7efbaa13 465 Pfam PF02321 Outer membrane efflux protein 271 449 4.4E-20 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 S40542_RS08850 f002386c5bab88f0ae5e443e7efbaa13 465 Pfam PF02321 Outer membrane efflux protein 61 242 5.7E-20 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 S40542_RS08850 f002386c5bab88f0ae5e443e7efbaa13 465 SUPERFAMILY SSF56954 2 453 9.16E-77 T 11-11-2016 S40542_RS08850 f002386c5bab88f0ae5e443e7efbaa13 465 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 15 450 3.1E-69 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 S40542_RS08850 f002386c5bab88f0ae5e443e7efbaa13 465 Gene3D G3DSA:1.20.1600.10 51 454 4.8E-77 T 11-11-2016 S40542_RS19950 1b1ff832e51d066b69ca03f4cae154ad 309 Gene3D G3DSA:3.40.50.880 14 195 8.6E-49 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS19950 1b1ff832e51d066b69ca03f4cae154ad 309 SUPERFAMILY SSF52317 14 196 3.95E-42 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS19950 1b1ff832e51d066b69ca03f4cae154ad 309 Pfam PF01965 DJ-1/PfpI family 15 175 7.7E-25 T 11-11-2016 IPR002818 DJ-1/PfpI S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 SUPERFAMILY SSF55486 4 489 1.59E-101 T 11-11-2016 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 7.9E-44 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 239 258 7.9E-44 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 7.9E-44 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 7.9E-44 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 147 167 7.9E-44 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 286 302 7.9E-44 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 259 278 7.9E-44 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 PIRSF PIRSF006615 1 490 1.9E-181 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS14515 8f5b8d154d5484b31750ad5bf8388f5c 490 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 489 1.5E-87 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 S40542_RS06815 f42673fb1cc3e3add0d9b0ae9345902c 130 Gene3D G3DSA:1.10.3680.10 20 123 7.0E-8 T 11-11-2016 IPR029024 TerB-like S40542_RS06815 f42673fb1cc3e3add0d9b0ae9345902c 130 SUPERFAMILY SSF158682 16 124 2.01E-10 T 11-11-2016 IPR029024 TerB-like S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 Gene3D G3DSA:3.40.50.970 56 470 3.2E-153 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 7 887 0.0 T 11-11-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 Gene3D G3DSA:3.40.50.970 474 706 7.0E-120 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 Gene3D G3DSA:3.40.50.920 708 887 1.3E-73 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 SUPERFAMILY SSF52518 475 702 6.0E-97 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 SUPERFAMILY SSF52518 57 470 3.63E-139 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 SUPERFAMILY SSF52922 703 887 1.95E-57 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 PIRSF PIRSF000156 1 888 0.0 T 11-11-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 107 295 5.6E-9 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS02420 fa5a94edb397ee0d1c05c2c513e01cc4 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 427 1.1E-5 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 SUPERFAMILY SSF56176 203 286 5.73E-21 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 Gene3D G3DSA:3.10.580.10 53 195 5.4E-25 T 11-11-2016 S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 Pfam PF00571 CBS domain 139 188 1.7E-6 T 11-11-2016 IPR000644 CBS domain S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 Pfam PF00571 CBS domain 67 122 7.4E-6 T 11-11-2016 IPR000644 CBS domain S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 SUPERFAMILY SSF54631 54 191 1.09E-32 T 11-11-2016 S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 Pfam PF03471 Transporter associated domain 206 281 3.3E-19 T 11-11-2016 IPR005170 Transporter-associated domain S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 SMART SM01091 205 283 9.2E-24 T 11-11-2016 IPR005170 Transporter-associated domain S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 SMART SM00116 76 125 7.4 T 11-11-2016 IPR000644 CBS domain S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 SMART SM00116 140 188 0.034 T 11-11-2016 IPR000644 CBS domain S40542_RS17795 692f9c97549ec7adad1ed118b54081f3 292 Gene3D G3DSA:3.30.465.10 196 283 1.3E-26 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 SMART SM00448 183 304 4.0E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 SUPERFAMILY SSF52172 179 309 2.56E-22 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 Pfam PF00072 Response regulator receiver domain 185 302 1.3E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 SMART SM00260 17 157 7.9E-18 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 SUPERFAMILY SSF50341 16 160 7.46E-33 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 Pfam PF01584 CheW-like domain 21 159 1.1E-32 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 Gene3D G3DSA:3.40.50.2300 181 309 2.7E-23 T 11-11-2016 S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 PIRSF PIRSF002867 1 311 6.7E-99 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV S40542_RS01140 d0bbbe3c2952405a7b289f95eee24790 313 Gene3D G3DSA:2.40.50.180 60 102 1.5E-7 T 11-11-2016 S40542_RS10575 2295e12abbe92410351cc451739e48dc 2225 SUPERFAMILY SSF49265 582 641 1.78E-5 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 S40542_RS10575 2295e12abbe92410351cc451739e48dc 2225 Gene3D G3DSA:2.60.40.10 463 547 5.0E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS10575 2295e12abbe92410351cc451739e48dc 2225 Pfam PF13550 Putative phage tail protein 263 423 7.6E-8 T 11-11-2016 IPR032876 Tip attachment protein J S40542_RS10575 2295e12abbe92410351cc451739e48dc 2225 Gene3D G3DSA:2.60.40.10 603 642 4.7E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS10575 2295e12abbe92410351cc451739e48dc 2225 SUPERFAMILY SSF49265 462 555 2.43E-6 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 S40542_RS10575 2295e12abbe92410351cc451739e48dc 2225 SMART SM00060 466 542 3.5 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 S40542_RS10575 2295e12abbe92410351cc451739e48dc 2225 SMART SM00060 552 630 12.0 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 S40542_RS17370 cde2ca59c4677689e6bc8cc5411c771a 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 25.915 T 11-11-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 S40542_RS17370 cde2ca59c4677689e6bc8cc5411c771a 193 PIRSF PIRSF006102 1 193 3.8E-62 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 S40542_RS17370 cde2ca59c4677689e6bc8cc5411c771a 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 3.7E-60 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 S40542_RS17370 cde2ca59c4677689e6bc8cc5411c771a 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 3.2E-88 T 11-11-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 S40542_RS11135 b01cb0444ce57679bcf140ce713d22f4 361 Gene3D G3DSA:1.10.10.60 289 339 2.7E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS11135 b01cb0444ce57679bcf140ce713d22f4 361 SUPERFAMILY SSF46689 290 340 8.96E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS11135 b01cb0444ce57679bcf140ce713d22f4 361 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 291 333 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 S40542_RS11135 b01cb0444ce57679bcf140ce713d22f4 361 SMART SM00342 254 337 3.1E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS11135 b01cb0444ce57679bcf140ce713d22f4 361 Pfam PF12833 Helix-turn-helix domain 260 338 1.0E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 S40542_RS11135 b01cb0444ce57679bcf140ce713d22f4 361 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 7.4E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS11135 b01cb0444ce57679bcf140ce713d22f4 361 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 7.4E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.336 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.7E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.7E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.7E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.7E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.7E-40 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 SUPERFAMILY SSF54919 1 141 7.33E-60 T 11-11-2016 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 8.3E-58 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 SMART SM00562 3 140 1.4E-89 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 S40542_RS03985 c7af7e832be675f5c266970f5f55531c 143 Gene3D G3DSA:3.30.70.141 1 140 3.3E-60 T 11-11-2016 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 PRINTS PR00313 NodO calcium binding signature 436 445 2.6E-9 T 11-11-2016 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 PRINTS PR00313 NodO calcium binding signature 296 307 2.6E-9 T 11-11-2016 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 PRINTS PR00313 NodO calcium binding signature 355 363 2.6E-9 T 11-11-2016 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 PRINTS PR00313 NodO calcium binding signature 397 405 2.6E-9 T 11-11-2016 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 SUPERFAMILY SSF51120 58 167 2.22E-7 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Gene3D G3DSA:2.150.10.10 277 410 1.8E-21 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Gene3D G3DSA:2.150.10.10 112 157 1.8E-21 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 SUPERFAMILY SSF51120 245 309 3.01E-10 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 SUPERFAMILY SSF51120 331 387 9.81E-10 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 111 120 18.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 127 138 15.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 336 353 0.33 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 271 288 13.0 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 370 381 3.7 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 395 404 8.5 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 289 306 0.0049 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS13410 0093d2f390aaa30b75647516b9eff290 543 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 354 368 1.1 T 11-11-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 S40542_RS07895 a7555a3374281e93a97f7f99ddf7e65c 281 SUPERFAMILY SSF101478 2 273 3.79E-41 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 S40542_RS07895 a7555a3374281e93a97f7f99ddf7e65c 281 Pfam PF03747 ADP-ribosylglycohydrolase 6 238 1.4E-32 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 S40542_RS08415 b53ce97b3041ce259ddcc4fa3391dd56 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 340 1.0E-34 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS08415 b53ce97b3041ce259ddcc4fa3391dd56 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 132 277 1.8E-11 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS08415 b53ce97b3041ce259ddcc4fa3391dd56 390 SUPERFAMILY SSF111369 58 290 1.11E-14 T 11-11-2016 S40542_RS06040 7fce2a87a5da042e25cc3ebb63e5ff00 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 6.6E-23 T 11-11-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 S40542_RS06040 7fce2a87a5da042e25cc3ebb63e5ff00 89 PIRSF PIRSF028784 1 89 4.8E-29 T 11-11-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 S40542_RS15505 72d08b052557872c5dbc08b1d129c1e7 739 Gene3D G3DSA:2.170.130.10 45 156 3.3E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS15505 72d08b052557872c5dbc08b1d129c1e7 739 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 722 739 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site S40542_RS15505 72d08b052557872c5dbc08b1d129c1e7 739 Pfam PF00593 TonB dependent receptor 504 737 1.1E-20 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS15505 72d08b052557872c5dbc08b1d129c1e7 739 SUPERFAMILY SSF56935 354 739 5.13E-91 T 11-11-2016 S40542_RS15505 72d08b052557872c5dbc08b1d129c1e7 739 SUPERFAMILY SSF56935 45 314 5.13E-91 T 11-11-2016 S40542_RS15505 72d08b052557872c5dbc08b1d129c1e7 739 Gene3D G3DSA:2.40.170.20 157 314 2.1E-82 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS15505 72d08b052557872c5dbc08b1d129c1e7 739 Gene3D G3DSA:2.40.170.20 349 739 2.1E-82 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS15505 72d08b052557872c5dbc08b1d129c1e7 739 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 155 8.7E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS06310 a45d74ee3955d7904139f90f3d3c8de9 82 Gene3D G3DSA:1.10.1200.10 3 79 1.1E-8 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS06310 a45d74ee3955d7904139f90f3d3c8de9 82 SUPERFAMILY SSF47336 22 80 1.87E-6 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19630 1cb935b5f9003f709360c8af4e02b194 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 2.5E-11 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 S40542_RS19630 1cb935b5f9003f709360c8af4e02b194 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 2.5E-11 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 S40542_RS19630 1cb935b5f9003f709360c8af4e02b194 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 105 119 2.5E-11 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 S40542_RS19630 1cb935b5f9003f709360c8af4e02b194 316 SUPERFAMILY SSF53474 3 312 6.25E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS19630 1cb935b5f9003f709360c8af4e02b194 316 Pfam PF00561 alpha/beta hydrolase fold 36 290 3.4E-21 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS19630 1cb935b5f9003f709360c8af4e02b194 316 PIRSF PIRSF006431 1 310 7.2E-82 T 11-11-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 S40542_RS19630 1cb935b5f9003f709360c8af4e02b194 316 Gene3D G3DSA:3.40.50.1820 12 301 5.2E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11070 f6842cf5a5b4e5ddb402208f4edf3198 198 Pfam PF07238 PilZ domain 109 176 4.4E-6 T 11-11-2016 IPR009875 PilZ domain GO:0035438 S40542_RS11070 f6842cf5a5b4e5ddb402208f4edf3198 198 Gene3D G3DSA:2.40.10.220 106 188 7.6E-4 T 11-11-2016 S40542_RS07385 88136cdd84e2402d7d4b013cba69c4f6 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 6.6E-21 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS07385 88136cdd84e2402d7d4b013cba69c4f6 129 Gene3D G3DSA:3.10.180.10 1 127 6.7E-35 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS07385 88136cdd84e2402d7d4b013cba69c4f6 129 SUPERFAMILY SSF54593 1 126 6.85E-35 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS10245 25c34ee6d094a6cc04e798d1fab0fa07 595 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 424 588 2.7E-53 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10245 25c34ee6d094a6cc04e798d1fab0fa07 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 429 586 1.6E-46 T 11-11-2016 IPR000160 GGDEF domain S40542_RS10245 25c34ee6d094a6cc04e798d1fab0fa07 595 SUPERFAMILY SSF55073 433 588 1.73E-48 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS10245 25c34ee6d094a6cc04e798d1fab0fa07 595 Gene3D G3DSA:3.30.70.270 430 589 9.5E-53 T 11-11-2016 S40542_RS10245 25c34ee6d094a6cc04e798d1fab0fa07 595 Pfam PF07695 7TM diverse intracellular signalling 177 380 2.9E-34 T 11-11-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 S40542_RS10245 25c34ee6d094a6cc04e798d1fab0fa07 595 Pfam PF07696 7TMR-DISM extracellular 2 41 165 2.8E-22 T 11-11-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 S40542_RS10245 25c34ee6d094a6cc04e798d1fab0fa07 595 SMART SM00267 417 590 2.7E-56 T 11-11-2016 IPR000160 GGDEF domain S40542_RS00015 9ccd094fe39f0d50611e5546fc916737 362 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 340 1.0E-22 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal S40542_RS00015 9ccd094fe39f0d50611e5546fc916737 362 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 5.4E-95 T 11-11-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 S40542_RS00015 9ccd094fe39f0d50611e5546fc916737 362 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 11-11-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 S40542_RS00015 9ccd094fe39f0d50611e5546fc916737 362 SUPERFAMILY SSF52540 1 330 1.22E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00015 9ccd094fe39f0d50611e5546fc916737 362 Gene3D G3DSA:3.40.50.300 231 341 1.9E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00015 9ccd094fe39f0d50611e5546fc916737 362 Gene3D G3DSA:3.40.50.300 1 171 1.9E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00015 9ccd094fe39f0d50611e5546fc916737 362 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 362 80.771 T 11-11-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 S40542_RS16005 8fc9639c2940442e1d51e38ce8b6b3d3 161 Pfam PF00578 AhpC/TSA family 33 145 3.1E-16 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS16005 8fc9639c2940442e1d51e38ce8b6b3d3 161 SUPERFAMILY SSF52833 33 154 2.09E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS16005 8fc9639c2940442e1d51e38ce8b6b3d3 161 Gene3D G3DSA:3.40.30.10 5 153 8.5E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS15950 1faa89181b26bd6fba37becc2baf4a41 168 Pfam PF01252 Signal peptidase (SPase) II 16 157 1.4E-35 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS15950 1faa89181b26bd6fba37becc2baf4a41 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.3E-15 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS15950 1faa89181b26bd6fba37becc2baf4a41 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.3E-15 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS15950 1faa89181b26bd6fba37becc2baf4a41 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.3E-15 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS15950 1faa89181b26bd6fba37becc2baf4a41 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.791 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS15950 1faa89181b26bd6fba37becc2baf4a41 168 TIGRFAM TIGR00077 lspA: signal peptidase II 5 161 1.2E-44 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS15950 1faa89181b26bd6fba37becc2baf4a41 168 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 S40542_RS13055 36bb125412a10825d1d875a52f54023d 120 SUPERFAMILY SSF158668 11 110 3.79E-13 T 11-11-2016 S40542_RS13055 36bb125412a10825d1d875a52f54023d 120 Gene3D G3DSA:1.20.120.330 11 110 4.1E-10 T 11-11-2016 S40542_RS06285 63283585d4e30dae97446a800b40f386 203 SUPERFAMILY SSF53697 14 197 3.84E-35 T 11-11-2016 S40542_RS06285 63283585d4e30dae97446a800b40f386 203 Pfam PF13580 SIS domain 22 156 8.7E-22 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 S40542_RS06285 63283585d4e30dae97446a800b40f386 203 Gene3D G3DSA:3.40.50.10490 19 197 1.1E-37 T 11-11-2016 S40542_RS09635 a7a28ac33b041363d6991b550bfc8dde 256 Gene3D G3DSA:3.40.50.150 18 211 5.4E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09635 a7a28ac33b041363d6991b550bfc8dde 256 Pfam PF08241 Methyltransferase domain 52 137 4.3E-12 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 S40542_RS09635 a7a28ac33b041363d6991b550bfc8dde 256 SUPERFAMILY SSF53335 30 198 2.16E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS05775 67a62e80b6cd930eca6ce0ef237fd051 481 Pfam PF03600 Citrate transporter 47 422 2.4E-61 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 S40542_RS16855 b281677ef2c86ced2050be83e2256e7c 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 1.7E-12 T 11-11-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain S40542_RS16855 b281677ef2c86ced2050be83e2256e7c 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 1.1E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS16855 b281677ef2c86ced2050be83e2256e7c 297 SUPERFAMILY SSF161098 90 277 3.79E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS16855 b281677ef2c86ced2050be83e2256e7c 297 Gene3D G3DSA:1.10.3720.10 86 292 2.4E-22 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 Gene3D G3DSA:3.40.50.980 78 264 2.3E-45 T 11-11-2016 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 11-11-2016 IPR020845 AMP-binding, conserved site S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 Pfam PF00501 AMP-binding enzyme 82 520 2.6E-91 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 Gene3D G3DSA:3.30.300.30 516 636 1.8E-27 T 11-11-2016 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 Gene3D G3DSA:3.40.50.980 265 425 2.3E-27 T 11-11-2016 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 52.345 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 641 4.4E-304 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 Gene3D G3DSA:2.30.38.10 437 513 5.6E-7 T 11-11-2016 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 1.5E-22 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 SUPERFAMILY SSF56801 9 641 1.57E-184 T 11-11-2016 S40542_RS03705 8e20d5b3f01bc5833233c14cb51a0c85 646 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 80 3.2E-22 T 11-11-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 S40542_RS04850 d0b755a08ced9ca3c9508cc9be3854f0 343 Pfam PF00005 ABC transporter 20 163 3.7E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS04850 d0b755a08ced9ca3c9508cc9be3854f0 343 SMART SM00382 28 213 1.8E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS04850 d0b755a08ced9ca3c9508cc9be3854f0 343 SUPERFAMILY SSF52540 4 238 3.41E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04850 d0b755a08ced9ca3c9508cc9be3854f0 343 SUPERFAMILY SSF50331 263 342 6.12E-7 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal S40542_RS04850 d0b755a08ced9ca3c9508cc9be3854f0 343 Gene3D G3DSA:3.40.50.300 4 236 4.4E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04850 d0b755a08ced9ca3c9508cc9be3854f0 343 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS10145 7b78482c147162a9d417e1d6262cf415 669 SMART SM00304 338 391 0.0025 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS10145 7b78482c147162a9d417e1d6262cf415 669 SMART SM00283 406 667 2.7E-76 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS10145 7b78482c147162a9d417e1d6262cf415 669 Gene3D G3DSA:1.10.287.950 424 636 6.9E-56 T 11-11-2016 S40542_RS10145 7b78482c147162a9d417e1d6262cf415 669 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 111 1.6E-6 T 11-11-2016 IPR024478 4HB MCP domain S40542_RS10145 7b78482c147162a9d417e1d6262cf415 669 SUPERFAMILY SSF58104 363 668 3.01E-73 T 11-11-2016 S40542_RS10145 7b78482c147162a9d417e1d6262cf415 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 452 666 5.0E-49 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS10145 7b78482c147162a9d417e1d6262cf415 669 Pfam PF00672 HAMP domain 319 387 1.4E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS03850 921634266f94b5b0f3c8598f514b2055 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 119 205 3.0E-28 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 S40542_RS11990 e8735f14053b41f696d3e504ad27eabb 645 SMART SM00382 423 551 3.0E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11990 e8735f14053b41f696d3e504ad27eabb 645 Gene3D G3DSA:3.40.50.300 386 568 3.5E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11990 e8735f14053b41f696d3e504ad27eabb 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 428 552 1.2E-26 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS11990 e8735f14053b41f696d3e504ad27eabb 645 SUPERFAMILY SSF52540 385 622 4.15E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05570 46e945a0ab0b40e64c1ee3dc79914a9b 157 Gene3D G3DSA:3.10.180.10 19 140 5.6E-27 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS05570 46e945a0ab0b40e64c1ee3dc79914a9b 157 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 130 3.7E-8 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS05570 46e945a0ab0b40e64c1ee3dc79914a9b 157 SUPERFAMILY SSF54593 13 149 1.25E-33 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS10930 9521a0e8c2d914d071f29071275efb35 228 SUPERFAMILY SSF51735 3 213 4.53E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10930 9521a0e8c2d914d071f29071275efb35 228 Pfam PF00106 short chain dehydrogenase 3 179 1.7E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10930 9521a0e8c2d914d071f29071275efb35 228 Gene3D G3DSA:3.40.50.720 3 214 2.4E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS10930 9521a0e8c2d914d071f29071275efb35 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 63 74 9.9E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10930 9521a0e8c2d914d071f29071275efb35 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 9.9E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10930 9521a0e8c2d914d071f29071275efb35 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 9.9E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10930 9521a0e8c2d914d071f29071275efb35 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 9.9E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS10930 9521a0e8c2d914d071f29071275efb35 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.9E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS05120 e3beade33577197a1241391fd95cb9e2 173 SUPERFAMILY SSF52218 1 169 2.86E-45 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS05120 e3beade33577197a1241391fd95cb9e2 173 Pfam PF00258 Flavodoxin 5 161 1.5E-26 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 S40542_RS05120 e3beade33577197a1241391fd95cb9e2 173 PIRSF PIRSF038996 1 173 2.9E-55 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 S40542_RS05120 e3beade33577197a1241391fd95cb9e2 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 2.9E-63 T 11-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 S40542_RS05120 e3beade33577197a1241391fd95cb9e2 173 Gene3D G3DSA:3.40.50.360 1 168 3.7E-55 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS05120 e3beade33577197a1241391fd95cb9e2 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 S40542_RS08730 dc5446cd9af30a89814338a633423336 236 Pfam PF07277 SapC 9 226 2.2E-70 T 11-11-2016 IPR010836 SapC S40542_RS22640 dfa759b0b75b0179e09edb8edae9ccc9 390 Pfam PF00246 Zinc carboxypeptidase 22 217 1.6E-13 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS22640 dfa759b0b75b0179e09edb8edae9ccc9 390 Gene3D G3DSA:3.40.630.10 26 234 3.2E-26 T 11-11-2016 S40542_RS22640 dfa759b0b75b0179e09edb8edae9ccc9 390 SUPERFAMILY SSF53187 32 252 2.41E-45 T 11-11-2016 S40542_RS07750 ae531a60a6058646d80129dbea5af511 246 SUPERFAMILY SSF51735 2 238 4.11E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS07750 ae531a60a6058646d80129dbea5af511 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.0E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS07750 ae531a60a6058646d80129dbea5af511 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.0E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS07750 ae531a60a6058646d80129dbea5af511 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.0E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS07750 ae531a60a6058646d80129dbea5af511 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.0E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS07750 ae531a60a6058646d80129dbea5af511 246 Pfam PF00106 short chain dehydrogenase 2 185 5.9E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS07750 ae531a60a6058646d80129dbea5af511 246 Gene3D G3DSA:3.40.50.720 2 188 3.9E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11605 1642d3ef824e08c377334200b917fcb8 73 Pfam PF11197 Protein of unknown function (DUF2835) 4 71 1.7E-24 T 11-11-2016 IPR021363 Protein of unknown function DUF2835 S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 Pfam PF08662 Eukaryotic translation initiation factor eIF2A 92 229 7.3E-6 T 11-11-2016 IPR013979 Translation initiation factor, beta propellor-like domain S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 SUPERFAMILY SSF50978 39 322 2.01E-50 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 Gene3D G3DSA:2.130.10.10 39 323 6.4E-48 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 180 194 - T 11-11-2016 IPR019775 WD40 repeat, conserved site S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 SMART SM00320 69 110 28.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 SMART SM00320 27 66 63.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 SMART SM00320 113 152 14.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 SMART SM00320 196 234 0.062 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 SMART SM00320 154 193 1.6E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS00775 d5cc9ca353ab9424dd2c15ff6b4b361b 332 SMART SM00320 237 278 0.16 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS15370 46e7c60e5c1413d17f0a2804fe2d165c 279 PIRSF PIRSF031767 4 278 8.3E-56 T 11-11-2016 IPR012379 LytTR MHYE transcriptional regulator, putative S40542_RS15370 46e7c60e5c1413d17f0a2804fe2d165c 279 SMART SM00850 179 276 2.6E-17 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS15370 46e7c60e5c1413d17f0a2804fe2d165c 279 Gene3D G3DSA:2.40.50.40 173 236 1.8E-13 T 11-11-2016 S40542_RS15370 46e7c60e5c1413d17f0a2804fe2d165c 279 Pfam PF04397 LytTr DNA-binding domain 182 275 3.3E-18 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS10635 e436278fd1bfec941e79ad78f7536c3b 182 Gene3D G3DSA:1.20.120.450 3 178 1.2E-40 T 11-11-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase S40542_RS10635 e436278fd1bfec941e79ad78f7536c3b 182 SUPERFAMILY SSF109854 5 160 2.2E-27 T 11-11-2016 S40542_RS10635 e436278fd1bfec941e79ad78f7536c3b 182 Pfam PF05163 DinB family 1 179 1.1E-26 T 11-11-2016 IPR007837 DNA damage-inducible protein DinB S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 275 41.14 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 5 31 6.4E-49 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 37 49 6.4E-49 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 249 274 6.4E-49 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 227 249 6.4E-49 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 81 103 6.4E-49 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 103 130 6.4E-49 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 SUPERFAMILY SSF53328 81 276 2.09E-56 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 Pfam PF00551 Formyl transferase 81 256 1.2E-44 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 4 275 1.7E-107 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 PIRSF PIRSF036480 1 276 1.9E-106 T 11-11-2016 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 SUPERFAMILY SSF55021 1 67 2.04E-9 T 11-11-2016 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 Gene3D G3DSA:3.30.70.260 2 66 1.3E-11 T 11-11-2016 S40542_RS03715 ab0498e792f6a68b5086eeb065c0e52a 276 Gene3D G3DSA:3.40.50.170 81 275 5.5E-53 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS03835 f1627c5bf2270c2657c2b8f0ece2205e 322 SMART SM00320 228 269 17.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS03835 f1627c5bf2270c2657c2b8f0ece2205e 322 SMART SM00320 104 143 19.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS03835 f1627c5bf2270c2657c2b8f0ece2205e 322 SMART SM00320 145 184 7.0E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS03835 f1627c5bf2270c2657c2b8f0ece2205e 322 SMART SM00320 272 317 190.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 S40542_RS03835 f1627c5bf2270c2657c2b8f0ece2205e 322 Gene3D G3DSA:2.130.10.10 38 319 5.5E-29 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS03835 f1627c5bf2270c2657c2b8f0ece2205e 322 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 171 185 - T 11-11-2016 IPR019775 WD40 repeat, conserved site S40542_RS03835 f1627c5bf2270c2657c2b8f0ece2205e 322 SUPERFAMILY SSF50978 37 320 1.79E-29 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 S40542_RS05465 17ea42177546cf18ddca0a5827d2fcbb 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.436 T 11-11-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 S40542_RS05465 17ea42177546cf18ddca0a5827d2fcbb 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.8E-72 T 11-11-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 S40542_RS05465 17ea42177546cf18ddca0a5827d2fcbb 149 Pfam PF03477 ATP cone domain 50 136 1.2E-19 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 S40542_RS05825 d46f955589cdb081749824a35500a796 280 Pfam PF14743 DNA ligase OB-like domain 212 277 5.2E-29 T 11-11-2016 IPR029319 DNA ligase, OB-like domain S40542_RS05825 d46f955589cdb081749824a35500a796 280 SUPERFAMILY SSF56091 26 199 4.32E-32 T 11-11-2016 S40542_RS05825 d46f955589cdb081749824a35500a796 280 Gene3D G3DSA:2.40.50.140 185 279 7.9E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS05825 d46f955589cdb081749824a35500a796 280 SUPERFAMILY SSF50249 172 277 1.2E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS05825 d46f955589cdb081749824a35500a796 280 Gene3D G3DSA:3.30.1490.70 151 184 6.7E-7 T 11-11-2016 S40542_RS05825 d46f955589cdb081749824a35500a796 280 Gene3D G3DSA:3.30.1490.70 30 50 6.7E-7 T 11-11-2016 S40542_RS05825 d46f955589cdb081749824a35500a796 280 Gene3D G3DSA:3.30.470.30 51 142 3.4E-4 T 11-11-2016 S40542_RS19545 a0fa2e414a5448d67645485d73469514 164 SUPERFAMILY SSF160369 4 155 3.01E-44 T 11-11-2016 S40542_RS19545 a0fa2e414a5448d67645485d73469514 164 Pfam PF00466 Ribosomal protein L10 5 101 2.6E-25 T 11-11-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 S40542_RS19545 a0fa2e414a5448d67645485d73469514 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.382 T 11-11-2016 IPR022973 Ribosomal protein L10 S40542_RS19545 a0fa2e414a5448d67645485d73469514 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-11-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS22455 cfc294bbeb63fa0092c71b60b2677d8b 276 SUPERFAMILY SSF52777 3 157 4.22E-11 T 11-11-2016 S40542_RS22455 cfc294bbeb63fa0092c71b60b2677d8b 276 Pfam PF00668 Condensation domain 192 273 3.6E-16 T 11-11-2016 IPR001242 Condensation domain S40542_RS22455 cfc294bbeb63fa0092c71b60b2677d8b 276 SUPERFAMILY SSF52777 190 275 1.67E-20 T 11-11-2016 S40542_RS18510 7043821e36ab1f178dd45f018b7af160 610 SUPERFAMILY SSF56235 2 198 4.72E-27 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS18510 7043821e36ab1f178dd45f018b7af160 610 Gene3D G3DSA:3.40.50.620 306 420 2.3E-5 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold S40542_RS18510 7043821e36ab1f178dd45f018b7af160 610 Pfam PF13522 Glutamine amidotransferase domain 63 184 3.3E-14 T 11-11-2016 S40542_RS18510 7043821e36ab1f178dd45f018b7af160 610 Gene3D G3DSA:3.60.20.10 2 189 7.2E-30 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS18510 7043821e36ab1f178dd45f018b7af160 610 Gene3D G3DSA:3.60.20.10 250 292 7.2E-30 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS18510 7043821e36ab1f178dd45f018b7af160 610 SUPERFAMILY SSF52402 288 436 7.45E-11 T 11-11-2016 S40542_RS00735 c28bfd5d0fbaa718e7e862e45cd1e990 881 Gene3D G3DSA:2.130.10.10 122 141 1.5E-6 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS00735 c28bfd5d0fbaa718e7e862e45cd1e990 881 Gene3D G3DSA:2.130.10.10 277 427 1.5E-6 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS00735 c28bfd5d0fbaa718e7e862e45cd1e990 881 SUPERFAMILY SSF101908 102 140 3.4E-10 T 11-11-2016 S40542_RS00735 c28bfd5d0fbaa718e7e862e45cd1e990 881 SUPERFAMILY SSF101908 276 426 3.4E-10 T 11-11-2016 S40542_RS15565 4dd7fdea288874a14a7271b6aa401dc5 456 Pfam PF07670 Nucleoside recognition 140 235 5.4E-9 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 S40542_RS13025 88b53dc382fbce1be8a7ffc79b397d99 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 115 4.3E-14 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 S40542_RS13025 88b53dc382fbce1be8a7ffc79b397d99 135 SUPERFAMILY SSF51316 2 132 1.46E-37 T 11-11-2016 IPR011057 Mss4-like S40542_RS13025 88b53dc382fbce1be8a7ffc79b397d99 135 Gene3D G3DSA:3.90.1590.10 2 132 6.6E-31 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 S40542_RS07870 889298befef77896729634b1a4910656 229 SUPERFAMILY SSF53335 12 98 1.72E-7 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS07870 889298befef77896729634b1a4910656 229 PIRSF PIRSF028234 1 229 1.1E-88 T 11-11-2016 IPR016876 Uncharacterised conserved protein UCP028234 S40542_RS07870 889298befef77896729634b1a4910656 229 Pfam PF12847 Methyltransferase domain 4 159 4.0E-27 T 11-11-2016 S40542_RS07870 889298befef77896729634b1a4910656 229 Gene3D G3DSA:3.40.50.150 8 111 1.9E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 Gene3D G3DSA:3.40.430.10 3 161 5.9E-62 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 PIRSF PIRSF000194 1 162 1.2E-63 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 11-11-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 PRINTS PR00070 Dihydrofolate reductase signature 14 24 5.7E-16 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 PRINTS PR00070 Dihydrofolate reductase signature 41 52 5.7E-16 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 PRINTS PR00070 Dihydrofolate reductase signature 92 106 5.7E-16 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 PRINTS PR00070 Dihydrofolate reductase signature 28 36 5.7E-16 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 Pfam PF00186 Dihydrofolate reductase 3 161 9.6E-63 T 11-11-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 S40542_RS03310 a88581881dd46c1a3cfe6169e36fbad4 163 SUPERFAMILY SSF53597 2 161 1.57E-59 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 S40542_RS19725 8979bb7aaf70254d2fa713af236c6d5c 543 SMART SM00228 160 238 4.9E-4 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS19725 8979bb7aaf70254d2fa713af236c6d5c 543 Gene3D G3DSA:3.90.226.10 245 437 4.3E-33 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS19725 8979bb7aaf70254d2fa713af236c6d5c 543 SUPERFAMILY SSF50156 159 253 1.21E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS19725 8979bb7aaf70254d2fa713af236c6d5c 543 Pfam PF13180 PDZ domain 173 247 4.9E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS19725 8979bb7aaf70254d2fa713af236c6d5c 543 SMART SM00245 239 454 1.3E-4 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS19725 8979bb7aaf70254d2fa713af236c6d5c 543 Gene3D G3DSA:2.30.42.10 162 244 4.9E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 S40542_RS19725 8979bb7aaf70254d2fa713af236c6d5c 543 SUPERFAMILY SSF52096 262 446 9.28E-31 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS19725 8979bb7aaf70254d2fa713af236c6d5c 543 Pfam PF03572 Peptidase family S41 268 412 4.7E-21 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 S40542_RS17680 b971757c8c24fece3d46cc17786f764b 223 SUPERFAMILY SSF89392 44 220 1.18E-34 T 11-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX S40542_RS17680 b971757c8c24fece3d46cc17786f764b 223 Pfam PF03550 Outer membrane lipoprotein LolB 67 218 2.8E-31 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 S40542_RS17680 b971757c8c24fece3d46cc17786f764b 223 Gene3D G3DSA:2.50.20.10 38 220 8.8E-44 T 11-11-2016 S40542_RS17680 b971757c8c24fece3d46cc17786f764b 223 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 28 220 20.136 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 S40542_RS17680 b971757c8c24fece3d46cc17786f764b 223 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 40 219 7.4E-28 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 S40542_RS11380 cf36b0b549497721001c47aac4170e1e 333 Gene3D G3DSA:3.60.10.10 3 331 1.0E-9 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS11380 cf36b0b549497721001c47aac4170e1e 333 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 36 324 1.4E-11 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS11380 cf36b0b549497721001c47aac4170e1e 333 SUPERFAMILY SSF56219 192 332 2.09E-27 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS11380 cf36b0b549497721001c47aac4170e1e 333 SUPERFAMILY SSF56219 6 165 2.09E-27 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS10065 165f22a912392c50decaa47da092427b 830 Pfam PF00999 Sodium/hydrogen exchanger family 11 425 2.6E-58 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 S40542_RS10065 165f22a912392c50decaa47da092427b 830 Pfam PF00027 Cyclic nucleotide-binding domain 727 814 2.1E-7 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS10065 165f22a912392c50decaa47da092427b 830 SUPERFAMILY SSF51206 697 822 5.89E-17 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS10065 165f22a912392c50decaa47da092427b 830 SMART SM00100 707 829 0.0012 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain S40542_RS10065 165f22a912392c50decaa47da092427b 830 Gene3D G3DSA:2.60.120.10 705 827 1.2E-15 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS06300 c99bae7b44faa165182e1771fb728d98 363 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 179 313 2.7E-10 T 11-11-2016 IPR006342 Methyltransferase FkbM S40542_RS06300 c99bae7b44faa165182e1771fb728d98 363 Gene3D G3DSA:3.40.50.150 177 358 2.0E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS06300 c99bae7b44faa165182e1771fb728d98 363 Pfam PF05050 Methyltransferase FkbM domain 181 315 1.3E-7 T 11-11-2016 IPR006342 Methyltransferase FkbM S40542_RS06300 c99bae7b44faa165182e1771fb728d98 363 SUPERFAMILY SSF53335 7 359 2.27E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09790 103491d771dcbd426e19a56cb411ea1d 271 SUPERFAMILY SSF53474 27 264 7.31E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS09790 103491d771dcbd426e19a56cb411ea1d 271 Pfam PF00326 Prolyl oligopeptidase family 110 246 2.3E-9 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS09790 103491d771dcbd426e19a56cb411ea1d 271 Gene3D G3DSA:3.40.50.1820 41 255 1.9E-22 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 364 38.187 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 55 70 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 161 179 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 251 263 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 103 120 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 38 53 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 23 38 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 81 100 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 PRINTS PR01010 Flagellar P-ring protein signature 120 138 1.2E-81 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS06115 1919dd607976735b0bd95fb863ad8c79 364 Pfam PF02119 Flagellar P-ring protein 23 363 2.2E-132 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 S40542_RS00235 74955c855083765235ec4692434e3681 703 SUPERFAMILY SSF46894 9 104 8.79E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS00235 74955c855083765235ec4692434e3681 703 Gene3D G3DSA:1.10.10.10 10 104 7.1E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS00235 74955c855083765235ec4692434e3681 703 SUPERFAMILY SSF69322 588 605 6.67E-19 T 11-11-2016 S40542_RS00235 74955c855083765235ec4692434e3681 703 SUPERFAMILY SSF69322 650 687 6.67E-19 T 11-11-2016 S40542_RS00235 74955c855083765235ec4692434e3681 703 SUPERFAMILY SSF69322 193 253 6.67E-19 T 11-11-2016 S40542_RS00235 74955c855083765235ec4692434e3681 703 SUPERFAMILY SSF69322 304 506 6.67E-19 T 11-11-2016 S40542_RS00235 74955c855083765235ec4692434e3681 703 Gene3D G3DSA:2.120.10.30 404 482 2.1E-8 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS00235 74955c855083765235ec4692434e3681 703 Gene3D G3DSA:2.120.10.30 523 689 2.1E-8 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS00235 74955c855083765235ec4692434e3681 703 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 102 4.9E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS00235 74955c855083765235ec4692434e3681 703 Gene3D G3DSA:2.120.10.60 181 403 2.2E-18 T 11-11-2016 S40542_RS00235 74955c855083765235ec4692434e3681 703 SUPERFAMILY SSF82171 511 698 3.92E-5 T 11-11-2016 S40542_RS00235 74955c855083765235ec4692434e3681 703 SMART SM00862 26 102 2.3E-12 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS00235 74955c855083765235ec4692434e3681 703 Pfam PF07676 WD40-like Beta Propeller Repeat 183 218 0.13 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS16535 1b150947d7fca89b60b35280e118dd16 296 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 8 128 1.6E-32 T 11-11-2016 IPR006521 Tail protein I S40542_RS16535 1b150947d7fca89b60b35280e118dd16 296 Pfam PF09684 Phage tail protein (Tail_P2_I) 8 128 1.3E-36 T 11-11-2016 IPR006521 Tail protein I S40542_RS07500 a35069fd1e930dc389cde68e7a22f30d 323 Gene3D G3DSA:3.30.70.1290 135 190 4.0E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07500 a35069fd1e930dc389cde68e7a22f30d 323 Gene3D G3DSA:3.30.70.1290 43 82 4.0E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07500 a35069fd1e930dc389cde68e7a22f30d 323 SMART SM01321 12 187 0.0011 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07500 a35069fd1e930dc389cde68e7a22f30d 323 SUPERFAMILY SSF143422 134 193 7.46E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07500 a35069fd1e930dc389cde68e7a22f30d 323 SUPERFAMILY SSF143422 15 81 7.46E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06245 e7311dedb837b312747b195bbd0538e9 254 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 238 4.0E-38 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 S40542_RS06245 e7311dedb837b312747b195bbd0538e9 254 SUPERFAMILY SSF52518 5 253 8.13E-70 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS06245 e7311dedb837b312747b195bbd0538e9 254 Gene3D G3DSA:3.40.50.970 3 253 1.4E-76 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold S40542_RS13495 5cf2ccfd4140c98b31abe03a8c12caeb 373 Gene3D G3DSA:3.40.50.2300 3 126 1.8E-39 T 11-11-2016 S40542_RS13495 5cf2ccfd4140c98b31abe03a8c12caeb 373 SMART SM00448 3 115 3.1E-38 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13495 5cf2ccfd4140c98b31abe03a8c12caeb 373 SUPERFAMILY SSF52172 2 129 1.42E-39 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS13495 5cf2ccfd4140c98b31abe03a8c12caeb 373 Pfam PF00072 Response regulator receiver domain 5 115 2.2E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS13455 571472521b512aebbe1a465bd9da4b4f 150 SUPERFAMILY SSF55729 18 147 4.56E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13455 571472521b512aebbe1a465bd9da4b4f 150 Pfam PF00583 Acetyltransferase (GNAT) family 53 127 6.7E-16 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS13455 571472521b512aebbe1a465bd9da4b4f 150 Gene3D G3DSA:3.40.630.30 44 140 6.7E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS01990 c7fe9273f34c6f857fe58d135481936b 349 Gene3D G3DSA:3.20.20.370 54 214 6.1E-31 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 S40542_RS01990 c7fe9273f34c6f857fe58d135481936b 349 Pfam PF01522 Polysaccharide deacetylase 82 213 1.2E-27 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 S40542_RS01990 c7fe9273f34c6f857fe58d135481936b 349 SUPERFAMILY SSF88713 42 217 9.73E-37 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 S40542_RS02535 4835a49ae01204f655fabe620fd85d33 365 SUPERFAMILY SSF69593 87 197 2.62E-8 T 11-11-2016 S40542_RS02535 4835a49ae01204f655fabe620fd85d33 365 Gene3D G3DSA:3.40.1130.10 57 220 5.7E-6 T 11-11-2016 S40542_RS02535 4835a49ae01204f655fabe620fd85d33 365 Pfam PF01553 Acyltransferase 87 198 2.5E-10 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS05360 c1c15e1303beffbdb5847fbff47b0298 67 Pfam PF11686 Protein of unknown function (DUF3283) 4 62 3.1E-20 T 11-11-2016 IPR021700 Protein of unknown function DUF3283 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 SUPERFAMILY SSF82866 569 771 2.62E-30 T 11-11-2016 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 Pfam PF03176 MMPL family 542 766 2.6E-14 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 PRINTS PR00702 Acriflavin resistance protein family signature 250 271 1.4E-5 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 PRINTS PR00702 Acriflavin resistance protein family signature 223 246 1.4E-5 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 PRINTS PR00702 Acriflavin resistance protein family signature 353 376 1.4E-5 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 SUPERFAMILY SSF82866 185 381 6.28E-28 T 11-11-2016 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 Pfam PF02460 Patched family 164 302 1.4E-8 T 11-11-2016 IPR003392 Protein patched/dispatched GO:0016021 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 Gene3D G3DSA:1.20.1640.10 609 774 6.9E-25 T 11-11-2016 S40542_RS11585 21d603a412c4557dacd1a3d62faf4e4c 776 Gene3D G3DSA:1.20.1640.10 182 385 2.7E-30 T 11-11-2016 S40542_RS10110 86358888fe453ff0efc17bb3a97b608f 623 Pfam PF05960 Bacterial protein of unknown function (DUF885) 64 613 2.0E-166 T 11-11-2016 IPR010281 Protein of unknown function DUF885 S40542_RS03840 2ae00bc8c69aefdb0b687be87afa52e9 572 Pfam PF09423 PhoD-like phosphatase 237 524 2.8E-12 T 11-11-2016 IPR018946 Alkaline phosphatase D-related S40542_RS03840 2ae00bc8c69aefdb0b687be87afa52e9 572 SUPERFAMILY SSF56300 308 517 2.28E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS03840 2ae00bc8c69aefdb0b687be87afa52e9 572 SUPERFAMILY SSF56300 144 227 2.28E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS03840 2ae00bc8c69aefdb0b687be87afa52e9 572 SUPERFAMILY SSF56300 260 279 2.28E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS13010 7bdfb1e929c102e8b32568270404c681 285 SMART SM00255 149 284 5.7E-4 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 S40542_RS13010 7bdfb1e929c102e8b32568270404c681 285 SUPERFAMILY SSF52200 146 260 8.89E-25 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 S40542_RS13010 7bdfb1e929c102e8b32568270404c681 285 Gene3D G3DSA:3.40.50.10140 146 257 2.2E-18 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 S40542_RS13010 7bdfb1e929c102e8b32568270404c681 285 Pfam PF13676 TIR domain 152 249 5.3E-15 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 Gene3D G3DSA:1.10.287.610 100 152 2.5E-27 T 11-11-2016 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.85 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 Pfam PF00318 Ribosomal protein S2 9 224 1.7E-95 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 Gene3D G3DSA:3.40.50.10490 158 235 5.7E-67 T 11-11-2016 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 Gene3D G3DSA:3.40.50.10490 23 99 5.7E-67 T 11-11-2016 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 SUPERFAMILY SSF52313 6 230 3.01E-97 T 11-11-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 5.6E-108 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.0E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.0E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.0E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.0E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.0E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06615 720fda25471efcdc6e8b6a3b7a9538da 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.0E-37 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS17645 189f95754dfdbc0190a137cef9169ac4 283 Pfam PF00793 DAHP synthetase I family 10 272 2.0E-69 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 S40542_RS17645 189f95754dfdbc0190a137cef9169ac4 283 Gene3D G3DSA:3.20.20.70 16 278 2.8E-107 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS17645 189f95754dfdbc0190a137cef9169ac4 283 SUPERFAMILY SSF51569 4 275 1.19E-102 T 11-11-2016 S40542_RS17645 189f95754dfdbc0190a137cef9169ac4 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 272 1.5E-116 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 S40542_RS17645 189f95754dfdbc0190a137cef9169ac4 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 274 49.246 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 S40542_RS19860 c11bb7e982c48765b92193a63976e3a4 358 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 5.9E-155 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 S40542_RS19860 c11bb7e982c48765b92193a63976e3a4 358 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 358 49.71 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 S40542_RS19860 c11bb7e982c48765b92193a63976e3a4 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 353 5.2E-130 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 S40542_RS19860 c11bb7e982c48765b92193a63976e3a4 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 S40542_RS19860 c11bb7e982c48765b92193a63976e3a4 358 SUPERFAMILY SSF53659 4 358 4.32E-120 T 11-11-2016 S40542_RS19860 c11bb7e982c48765b92193a63976e3a4 358 SMART SM01329 7 354 2.0E-196 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 S40542_RS19860 c11bb7e982c48765b92193a63976e3a4 358 Gene3D G3DSA:3.40.718.10 3 358 1.5E-127 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 S40542_RS01355 474ca81d264e7c76461c81482812c678 200 Pfam PF05137 Fimbrial assembly protein (PilN) 101 173 5.8E-14 T 11-11-2016 IPR007813 Fimbrial assembly PilN S40542_RS01800 36bc82a4ba9af9eb77cc9240d21681e2 456 Pfam PF00144 Beta-lactamase 59 421 9.8E-32 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS01800 36bc82a4ba9af9eb77cc9240d21681e2 456 SUPERFAMILY SSF56601 39 435 4.58E-47 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS01800 36bc82a4ba9af9eb77cc9240d21681e2 456 Gene3D G3DSA:3.40.710.10 31 436 2.4E-45 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS17175 b0473ba00f71f21fcb821e45c2d1bb68 254 SUPERFAMILY SSF53335 29 214 1.32E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS17175 b0473ba00f71f21fcb821e45c2d1bb68 254 Pfam PF08241 Methyltransferase domain 72 125 1.9E-9 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 S40542_RS17175 b0473ba00f71f21fcb821e45c2d1bb68 254 Gene3D G3DSA:3.40.50.150 56 181 2.1E-17 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 Pfam PF13087 AAA domain 483 654 4.9E-24 T 11-11-2016 S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 Pfam PF13086 AAA domain 109 460 3.6E-26 T 11-11-2016 S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 Gene3D G3DSA:3.40.50.300 514 656 5.4E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 Pfam PF10881 Protein of unknown function (DUF2726) 766 835 4.5E-9 T 11-11-2016 IPR024402 Domain of unknown function DUF2726 S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 SUPERFAMILY SSF52540 107 175 5.52E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 SUPERFAMILY SSF52540 681 717 5.52E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 SUPERFAMILY SSF52540 382 652 5.52E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 Gene3D G3DSA:3.40.50.300 93 236 3.8E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08345 8ea3a014bcf6469d0e93814f827d3d41 843 Gene3D G3DSA:3.40.50.300 420 513 3.8E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 SMART SM00098 55 480 5.0E-9 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 PRINTS PR00113 Alkaline phosphatase signature 284 313 1.6E-21 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 PRINTS PR00113 Alkaline phosphatase signature 137 157 1.6E-21 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 PRINTS PR00113 Alkaline phosphatase signature 99 114 1.6E-21 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 PRINTS PR00113 Alkaline phosphatase signature 181 191 1.6E-21 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 Gene3D G3DSA:3.40.720.10 70 478 9.6E-88 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 Gene3D G3DSA:3.40.720.10 1 22 9.6E-88 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 Pfam PF00245 Alkaline phosphatase 99 383 5.1E-42 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 SUPERFAMILY SSF53649 1 29 7.98E-74 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 S40542_RS07170 ba85e300364b946ee56fdabf069907ee 484 SUPERFAMILY SSF53649 97 477 7.98E-74 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 S40542_RS08090 da234f9746908a4ba25d9890521fd7d6 419 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 178 329 5.0E-11 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain S40542_RS08090 da234f9746908a4ba25d9890521fd7d6 419 Gene3D G3DSA:3.90.1170.30 57 116 1.2E-4 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 S40542_RS08090 da234f9746908a4ba25d9890521fd7d6 419 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 57 114 2.3E-4 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 S40542_RS08090 da234f9746908a4ba25d9890521fd7d6 419 Gene3D G3DSA:2.40.50.100 232 268 8.5E-10 T 11-11-2016 S40542_RS11030 59fcdb695150306fae4a9d8e78ab15fb 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 118 9.1E-25 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 S40542_RS11030 59fcdb695150306fae4a9d8e78ab15fb 126 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 6.2E-31 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 S40542_RS11030 59fcdb695150306fae4a9d8e78ab15fb 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 123 19.239 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 S40542_RS06745 c3e817fa9ed74ca6b9a96108a32935e3 303 SMART SM01321 11 159 0.0054 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06745 c3e817fa9ed74ca6b9a96108a32935e3 303 Gene3D G3DSA:3.30.70.1290 107 161 4.0E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06745 c3e817fa9ed74ca6b9a96108a32935e3 303 Gene3D G3DSA:3.30.70.1290 24 54 4.0E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06745 c3e817fa9ed74ca6b9a96108a32935e3 303 SUPERFAMILY SSF143422 13 53 2.43E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06745 c3e817fa9ed74ca6b9a96108a32935e3 303 SUPERFAMILY SSF143422 106 164 2.43E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS18340 c3449eba92f6b95cee434883fdc08f2d 451 Pfam PF14052 Capsule assembly protein Wzi 272 382 2.0E-7 T 11-11-2016 IPR026950 Capsule assembly protein Wzi S40542_RS18340 c3449eba92f6b95cee434883fdc08f2d 451 Pfam PF14052 Capsule assembly protein Wzi 35 253 1.9E-33 T 11-11-2016 IPR026950 Capsule assembly protein Wzi S40542_RS05390 6882e88e5024e67355c1543239edb747 173 Pfam PF00293 NUDIX domain 20 139 5.2E-14 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS05390 6882e88e5024e67355c1543239edb747 173 PRINTS PR00502 NUDIX hydrolase family signature 43 57 8.9E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 S40542_RS05390 6882e88e5024e67355c1543239edb747 173 PRINTS PR00502 NUDIX hydrolase family signature 57 72 8.9E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 S40542_RS05390 6882e88e5024e67355c1543239edb747 173 Gene3D G3DSA:3.90.79.10 18 139 2.2E-22 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS05390 6882e88e5024e67355c1543239edb747 173 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 S40542_RS05390 6882e88e5024e67355c1543239edb747 173 SUPERFAMILY SSF55811 16 139 2.98E-21 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS19215 aafe9ae82a9d729f871f384e68af31e0 204 Pfam PF03458 UPF0126 domain 7 79 8.9E-23 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 S40542_RS19215 aafe9ae82a9d729f871f384e68af31e0 204 Pfam PF03458 UPF0126 domain 94 165 9.7E-20 T 11-11-2016 IPR005115 Uncharacterised domain UPF0126 S40542_RS16655 da09c93856143feb8852477da466dffd 235 Pfam PF13144 Chaperone for flagella basal body P-ring formation 36 233 1.9E-47 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal S40542_RS16655 da09c93856143feb8852477da466dffd 235 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 101 234 1.9E-35 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal S40542_RS16655 da09c93856143feb8852477da466dffd 235 Gene3D G3DSA:3.90.1210.10 115 174 2.7E-4 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 S40542_RS16655 da09c93856143feb8852477da466dffd 235 SMART SM00858 113 175 8.0E-6 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 S40542_RS07520 81f392442bb45e2ec71116fbd07dc7a9 323 SMART SM01321 12 187 0.0015 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07520 81f392442bb45e2ec71116fbd07dc7a9 323 SUPERFAMILY SSF143422 134 193 4.32E-19 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07520 81f392442bb45e2ec71116fbd07dc7a9 323 SUPERFAMILY SSF143422 15 81 4.32E-19 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07520 81f392442bb45e2ec71116fbd07dc7a9 323 Gene3D G3DSA:3.30.70.1290 135 190 2.9E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07520 81f392442bb45e2ec71116fbd07dc7a9 323 Gene3D G3DSA:3.30.70.1290 16 82 2.9E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS11045 6592d660dd8351f9033a2b7c784c6f74 877 Pfam PF01580 FtsK/SpoIIIE family 491 704 2.8E-69 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 S40542_RS11045 6592d660dd8351f9033a2b7c784c6f74 877 SUPERFAMILY SSF46785 809 874 1.77E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11045 6592d660dd8351f9033a2b7c784c6f74 877 SUPERFAMILY SSF52540 464 777 1.06E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11045 6592d660dd8351f9033a2b7c784c6f74 877 Pfam PF09397 Ftsk gamma domain 811 871 1.2E-26 T 11-11-2016 IPR018541 FtsK gamma domain S40542_RS11045 6592d660dd8351f9033a2b7c784c6f74 877 Gene3D G3DSA:3.40.50.300 465 771 1.4E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11045 6592d660dd8351f9033a2b7c784c6f74 877 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 8 177 1.7E-36 T 11-11-2016 IPR025199 DNA translocase FtsK, 4TM region S40542_RS11045 6592d660dd8351f9033a2b7c784c6f74 877 SMART SM00843 809 874 7.8E-40 T 11-11-2016 IPR018541 FtsK gamma domain S40542_RS02370 b3e67432aaa95ff011c6abb77603a80a 191 SUPERFAMILY SSF51316 5 111 6.07E-6 T 11-11-2016 IPR011057 Mss4-like S40542_RS02115 62951e505b901797b5bc3a80ebf71df8 158 Gene3D G3DSA:3.30.1360.100 81 157 3.8E-25 T 11-11-2016 IPR023229 Type II secretion system protein M, periplasmic domain S40542_RS02115 62951e505b901797b5bc3a80ebf71df8 158 Pfam PF04612 Type II secretion system (T2SS), protein M 3 157 1.6E-39 T 11-11-2016 IPR007690 Type II secretion system, protein M GO:0006858 S40542_RS02115 62951e505b901797b5bc3a80ebf71df8 158 SUPERFAMILY SSF103054 81 157 1.83E-22 T 11-11-2016 IPR023229 Type II secretion system protein M, periplasmic domain S40542_RS02115 62951e505b901797b5bc3a80ebf71df8 158 PIRSF PIRSF006291 1 158 1.1E-41 T 11-11-2016 IPR007690 Type II secretion system, protein M GO:0006858 S40542_RS18825 27feb65ff69459e423a635205a7ffca6 237 SUPERFAMILY SSF53335 40 218 5.52E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18825 27feb65ff69459e423a635205a7ffca6 237 Pfam PF13649 Methyltransferase domain 46 140 8.4E-19 T 11-11-2016 S40542_RS18825 27feb65ff69459e423a635205a7ffca6 237 Gene3D G3DSA:3.40.50.150 39 224 3.6E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS02300 31174fb93ec92a0a3815091249c8e074 808 Pfam PF17148 Domain of unknown function (DUF5117) 85 277 1.0E-39 T 11-11-2016 IPR033413 Domain of unknown function DUF5117 S40542_RS02300 31174fb93ec92a0a3815091249c8e074 808 Gene3D G3DSA:3.40.390.10 411 480 2.0E-9 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS02300 31174fb93ec92a0a3815091249c8e074 808 Pfam PF16313 Met-zincin 406 710 1.5E-67 T 11-11-2016 IPR032534 Domian of unknown function DUF4953 S40542_RS02300 31174fb93ec92a0a3815091249c8e074 808 SUPERFAMILY SSF55486 412 479 6.58E-27 T 11-11-2016 S40542_RS02300 31174fb93ec92a0a3815091249c8e074 808 SUPERFAMILY SSF55486 216 378 6.58E-27 T 11-11-2016 S40542_RS19155 fa5b9d2afe0737d161682f9e65ca3530 238 SMART SM00702 3 221 0.0027 T 11-11-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 S40542_RS19155 fa5b9d2afe0737d161682f9e65ca3530 238 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 129 220 1.4E-10 T 11-11-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 S40542_RS00660 222599cb2b92431927cbd19cb02dc00a 148 Pfam PF13279 Thioesterase-like superfamily 18 120 1.5E-7 T 11-11-2016 S40542_RS00660 222599cb2b92431927cbd19cb02dc00a 148 Gene3D G3DSA:3.10.129.10 11 133 4.4E-30 T 11-11-2016 IPR029069 HotDog domain S40542_RS00660 222599cb2b92431927cbd19cb02dc00a 148 SUPERFAMILY SSF54637 11 141 2.7E-27 T 11-11-2016 IPR029069 HotDog domain S40542_RS10150 1e9689ffc97f5543b4021879246a6e2e 1184 SUPERFAMILY SSF69318 1043 1095 1.7E-8 T 11-11-2016 S40542_RS10150 1e9689ffc97f5543b4021879246a6e2e 1184 SUPERFAMILY SSF69318 856 993 1.7E-8 T 11-11-2016 S40542_RS10150 1e9689ffc97f5543b4021879246a6e2e 1184 SUPERFAMILY SSF69318 618 831 5.95E-23 T 11-11-2016 S40542_RS10150 1e9689ffc97f5543b4021879246a6e2e 1184 SUPERFAMILY SSF69318 524 566 5.95E-23 T 11-11-2016 S40542_RS11420 be8452d9beaa525f8e24002b58784521 244 Gene3D G3DSA:3.40.50.300 1 225 2.6E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11420 be8452d9beaa525f8e24002b58784521 244 SMART SM00382 26 209 2.4E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS11420 be8452d9beaa525f8e24002b58784521 244 SUPERFAMILY SSF52540 2 223 1.07E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS11420 be8452d9beaa525f8e24002b58784521 244 Pfam PF00005 ABC transporter 17 160 4.7E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS04420 6d9591a12214bbf9d5c089e811372052 163 SUPERFAMILY SSF52540 13 160 1.76E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04420 6d9591a12214bbf9d5c089e811372052 163 Pfam PF07728 AAA domain (dynein-related subfamily) 29 160 1.6E-10 T 11-11-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 S40542_RS04420 6d9591a12214bbf9d5c089e811372052 163 Gene3D G3DSA:3.40.50.300 13 160 3.6E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04420 6d9591a12214bbf9d5c089e811372052 163 SMART SM00382 25 161 0.0028 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS08435 21d6d90ae4e8013bb3616e49aab3d436 728 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 546 3.8E-99 T 11-11-2016 IPR003776 YcaO-like domain S40542_RS08435 21d6d90ae4e8013bb3616e49aab3d436 728 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 535 4.4E-69 T 11-11-2016 IPR003776 YcaO-like domain S40542_RS08435 21d6d90ae4e8013bb3616e49aab3d436 728 Gene3D G3DSA:3.30.300.20 1 127 2.0E-31 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta S40542_RS08435 21d6d90ae4e8013bb3616e49aab3d436 728 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 722 0.0 T 11-11-2016 IPR019938 YcaO domain protein S40542_RS08435 21d6d90ae4e8013bb3616e49aab3d436 728 SUPERFAMILY SSF82784 1 126 1.31E-19 T 11-11-2016 IPR003718 OsmC/Ohr family S40542_RS08435 21d6d90ae4e8013bb3616e49aab3d436 728 Pfam PF02566 OsmC-like protein 32 127 5.7E-11 T 11-11-2016 IPR003718 OsmC/Ohr family S40542_RS10920 95140ef5fb3c5e2f83eb69d20678ac9d 565 SUPERFAMILY SSF55486 56 265 4.4E-23 T 11-11-2016 S40542_RS10920 95140ef5fb3c5e2f83eb69d20678ac9d 565 Pfam PF01400 Astacin (Peptidase family M12A) 58 263 7.7E-21 T 11-11-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 S40542_RS10920 95140ef5fb3c5e2f83eb69d20678ac9d 565 Gene3D G3DSA:3.40.390.10 57 265 9.5E-32 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 S40542_RS10920 95140ef5fb3c5e2f83eb69d20678ac9d 565 PRINTS PR00480 Astacin family signature 143 161 3.7E-5 T 11-11-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 S40542_RS10920 95140ef5fb3c5e2f83eb69d20678ac9d 565 PRINTS PR00480 Astacin family signature 162 179 3.7E-5 T 11-11-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 S40542_RS10920 95140ef5fb3c5e2f83eb69d20678ac9d 565 PRINTS PR00480 Astacin family signature 251 264 3.7E-5 T 11-11-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 S40542_RS10920 95140ef5fb3c5e2f83eb69d20678ac9d 565 PRINTS PR00480 Astacin family signature 81 99 3.7E-5 T 11-11-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 S40542_RS10920 95140ef5fb3c5e2f83eb69d20678ac9d 565 SMART SM00235 55 211 1.3E-9 T 11-11-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 S40542_RS06000 506e3a887f02f16dfd3024e8a30ca2a5 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 4.0E-36 T 11-11-2016 S40542_RS06000 506e3a887f02f16dfd3024e8a30ca2a5 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.1E-36 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS06000 506e3a887f02f16dfd3024e8a30ca2a5 89 Gene3D G3DSA:1.10.287.10 3 89 1.2E-37 T 11-11-2016 IPR009068 S15/NS1, RNA-binding S40542_RS06000 506e3a887f02f16dfd3024e8a30ca2a5 89 Pfam PF00312 Ribosomal protein S15 8 88 7.1E-36 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06000 506e3a887f02f16dfd3024e8a30ca2a5 89 SUPERFAMILY SSF47060 3 89 1.65E-33 T 11-11-2016 IPR009068 S15/NS1, RNA-binding S40542_RS06000 506e3a887f02f16dfd3024e8a30ca2a5 89 SMART SM01387 8 88 1.8E-51 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS06000 506e3a887f02f16dfd3024e8a30ca2a5 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.149 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS06000 506e3a887f02f16dfd3024e8a30ca2a5 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS18845 9c3a23453ab33830faa5f38e4a418f08 319 Gene3D G3DSA:3.40.50.150 131 242 1.2E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18845 9c3a23453ab33830faa5f38e4a418f08 319 Pfam PF13847 Methyltransferase domain 150 213 1.4E-11 T 11-11-2016 IPR025714 Methyltransferase domain S40542_RS18845 9c3a23453ab33830faa5f38e4a418f08 319 SUPERFAMILY SSF53335 138 309 8.52E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS08875 db5c2f40f0550802b4f460903280341b 92 Pfam PF08891 YfcL protein 5 88 2.0E-27 T 11-11-2016 IPR014987 Uncharacterised protein family YfcL S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Gene3D G3DSA:3.50.4.10 175 245 1.1E-7 T 11-11-2016 S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Gene3D G3DSA:3.50.4.10 256 318 5.5E-5 T 11-11-2016 S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Gene3D G3DSA:3.50.4.10 84 162 2.9E-8 T 11-11-2016 S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Gene3D G3DSA:3.50.4.10 5 75 1.4E-5 T 11-11-2016 S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Pfam PF14295 PAN domain 9 58 1.0E-13 T 11-11-2016 IPR003609 PAN/Apple domain S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Pfam PF14295 PAN domain 95 144 1.1E-12 T 11-11-2016 IPR003609 PAN/Apple domain S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Pfam PF14295 PAN domain 176 227 1.6E-12 T 11-11-2016 IPR003609 PAN/Apple domain S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Pfam PF14295 PAN domain 261 293 1.1E-4 T 11-11-2016 IPR003609 PAN/Apple domain S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 SUPERFAMILY SSF50985 287 583 7.19E-36 T 11-11-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 393 435 3.0E-6 T 11-11-2016 IPR000408 Regulator of chromosome condensation, RCC1 S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 339 385 6.6E-10 T 11-11-2016 IPR000408 Regulator of chromosome condensation, RCC1 S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Gene3D G3DSA:2.130.10.30 620 648 1.3E-30 T 11-11-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II S40542_RS13145 2f2aeb87bb98b832edf71e22862618dc 662 Gene3D G3DSA:2.130.10.30 322 577 1.3E-30 T 11-11-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II S40542_RS15365 8b07474acd2fba7b0535586a90d18493 390 Pfam PF01757 Acyltransferase family 11 368 2.7E-16 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 S40542_RS00500 87c87febb337eb09fe7c28b336239681 78 Pfam PF02416 mttA/Hcf106 family 6 55 3.9E-14 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 S40542_RS00500 87c87febb337eb09fe7c28b336239681 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 77 23.957 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 S40542_RS00500 87c87febb337eb09fe7c28b336239681 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 50 6.7E-22 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 S40542_RS16660 4cba5c1025d455153a71d68f98c66dc5 107 SUPERFAMILY SSF101498 24 102 2.48E-17 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 S40542_RS16660 4cba5c1025d455153a71d68f98c66dc5 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 8 102 4.9E-23 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 S40542_RS16660 4cba5c1025d455153a71d68f98c66dc5 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 46 99 5.6E-18 T 11-11-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal S40542_RS07650 af804f100e06cf18cb9793a9850ead91 323 SMART SM01321 12 187 8.6E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07650 af804f100e06cf18cb9793a9850ead91 323 Gene3D G3DSA:3.30.70.1290 135 190 3.1E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07650 af804f100e06cf18cb9793a9850ead91 323 Gene3D G3DSA:3.30.70.1290 16 82 3.1E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07650 af804f100e06cf18cb9793a9850ead91 323 SUPERFAMILY SSF143422 15 81 3.92E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07650 af804f100e06cf18cb9793a9850ead91 323 SUPERFAMILY SSF143422 134 193 3.92E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS18840 1f06a9957599d14feb9e64746333793f 391 Gene3D G3DSA:3.40.50.720 1 105 1.1E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18840 1f06a9957599d14feb9e64746333793f 391 SUPERFAMILY SSF51735 1 141 4.32E-9 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS00550 8d50ba872caea15ea15500c1e8c43655 228 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 196 6.6E-9 T 11-11-2016 S40542_RS00550 8d50ba872caea15ea15500c1e8c43655 228 Gene3D G3DSA:3.40.50.1000 1 221 1.0E-22 T 11-11-2016 IPR023214 HAD-like domain S40542_RS00550 8d50ba872caea15ea15500c1e8c43655 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 196 9.1E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS00550 8d50ba872caea15ea15500c1e8c43655 228 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 38.986 T 11-11-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 S40542_RS00550 8d50ba872caea15ea15500c1e8c43655 228 SUPERFAMILY SSF56784 1 221 8.9E-55 T 11-11-2016 IPR023214 HAD-like domain S40542_RS00550 8d50ba872caea15ea15500c1e8c43655 228 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 222 1.5E-77 T 11-11-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 S40542_RS08525 3d52788bacddd38a581db76da504c7ff 449 Gene3D G3DSA:2.40.50.100 221 251 3.9E-9 T 11-11-2016 S40542_RS08525 3d52788bacddd38a581db76da504c7ff 449 Gene3D G3DSA:2.40.50.100 74 104 3.9E-9 T 11-11-2016 S40542_RS08525 3d52788bacddd38a581db76da504c7ff 449 Pfam PF13533 Biotin-lipoyl like 75 119 2.3E-5 T 11-11-2016 S40542_RS08525 3d52788bacddd38a581db76da504c7ff 449 SUPERFAMILY SSF111369 200 278 7.85E-17 T 11-11-2016 S40542_RS08525 3d52788bacddd38a581db76da504c7ff 449 SUPERFAMILY SSF111369 62 126 7.85E-17 T 11-11-2016 S40542_RS08525 3d52788bacddd38a581db76da504c7ff 449 SUPERFAMILY SSF111369 155 171 7.85E-17 T 11-11-2016 S40542_RS01525 7fa0fee7af657f463483852344ff169d 188 PIRSF PIRSF029811 1 188 1.0E-59 T 11-11-2016 IPR027016 Uncharacterised protein with YceI domain S40542_RS01525 7fa0fee7af657f463483852344ff169d 188 SUPERFAMILY SSF101874 19 186 4.45E-16 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like S40542_RS01525 7fa0fee7af657f463483852344ff169d 188 SMART SM00867 19 186 3.4E-4 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like S40542_RS01525 7fa0fee7af657f463483852344ff169d 188 Gene3D G3DSA:2.40.128.110 19 186 5.5E-8 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like S40542_RS01525 7fa0fee7af657f463483852344ff169d 188 Pfam PF04264 YceI-like domain 20 185 1.2E-10 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like S40542_RS10790 2491dafaa8dfbb00adffcc5a7f752778 613 Pfam PF01593 Flavin containing amine oxidoreductase 54 582 2.2E-6 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 S40542_RS10790 2491dafaa8dfbb00adffcc5a7f752778 613 SUPERFAMILY SSF54373 381 529 1.77E-7 T 11-11-2016 S40542_RS10790 2491dafaa8dfbb00adffcc5a7f752778 613 SUPERFAMILY SSF51905 3 397 2.07E-10 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10790 2491dafaa8dfbb00adffcc5a7f752778 613 SUPERFAMILY SSF51905 549 583 2.07E-10 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS10790 2491dafaa8dfbb00adffcc5a7f752778 613 Gene3D G3DSA:3.90.660.10 382 521 5.8E-22 T 11-11-2016 S40542_RS10790 2491dafaa8dfbb00adffcc5a7f752778 613 Gene3D G3DSA:3.90.660.10 52 127 5.8E-22 T 11-11-2016 S40542_RS11195 9b269f274212b7b443a95527d9498a05 813 Pfam PF12704 MacB-like periplasmic core domain 28 235 1.6E-13 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS11195 9b269f274212b7b443a95527d9498a05 813 Pfam PF12704 MacB-like periplasmic core domain 450 647 2.6E-9 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS11195 9b269f274212b7b443a95527d9498a05 813 Pfam PF02687 FtsX-like permease family 693 804 8.3E-12 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS04855 e8f65f54a18138c0c2f9717de8cbc976 309 SUPERFAMILY SSF54909 1 300 1.22E-69 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS04855 e8f65f54a18138c0c2f9717de8cbc976 309 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 298 7.7E-39 T 11-11-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 S40542_RS04855 e8f65f54a18138c0c2f9717de8cbc976 309 Pfam PF04261 Dyp-type peroxidase family 5 298 2.5E-39 T 11-11-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 SUPERFAMILY SSF52096 24 281 1.33E-87 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 9.9E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 9.9E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 9.9E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 9.9E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 9.9E-38 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 280 36.768 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 Pfam PF01039 Carboxyl transferase domain 101 238 1.4E-15 T 11-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 Gene3D G3DSA:3.90.226.10 18 279 9.1E-76 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS17055 b03719a9a579037afdc919647e787c0f 291 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 2.8E-132 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 SUPERFAMILY SSF53474 62 129 1.02E-30 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 SUPERFAMILY SSF53474 165 437 1.02E-30 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 Pfam PF00561 alpha/beta hydrolase fold 83 444 1.4E-18 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 Gene3D G3DSA:3.40.50.1820 348 461 2.4E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 Gene3D G3DSA:3.40.50.1820 168 289 2.4E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 Gene3D G3DSA:3.40.50.1820 49 131 2.4E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 84 92 1.2E-6 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 115 126 1.2E-6 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 S40542_RS11425 3ca0b650c98ff73f622477e718600489 497 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 194 208 1.2E-6 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 S40542_RS15465 9daa97454002206a4a1cd61f11dce1e8 448 Pfam PF00209 Sodium:neurotransmitter symporter family 150 447 9.0E-25 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS15465 9daa97454002206a4a1cd61f11dce1e8 448 Pfam PF00209 Sodium:neurotransmitter symporter family 5 120 1.3E-17 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS15465 9daa97454002206a4a1cd61f11dce1e8 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 2.4E-5 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS15465 9daa97454002206a4a1cd61f11dce1e8 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 2.4E-5 T 11-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 S40542_RS15465 9daa97454002206a4a1cd61f11dce1e8 448 SUPERFAMILY SSF161070 5 448 4.45E-113 T 11-11-2016 S40542_RS00275 07dd772e22016d72451e889f0743ca00 165 Pfam PF08534 Redoxin 35 148 3.9E-6 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 S40542_RS00275 07dd772e22016d72451e889f0743ca00 165 SUPERFAMILY SSF52833 36 160 2.03E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS00275 07dd772e22016d72451e889f0743ca00 165 Gene3D G3DSA:3.40.30.10 23 160 1.0E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 SMART SM01004 9 333 4.3E-246 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 5.1E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 5.1E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 5.1E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 5.1E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 5.1E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 5.1E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 Gene3D G3DSA:3.20.20.70 8 335 2.5E-152 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 PIRSF PIRSF001415 4 336 9.4E-151 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 11-11-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 7.2E-141 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 S40542_RS00470 68d0e113766df3aca934ce35950d3b3d 336 SUPERFAMILY SSF51569 8 335 1.9E-145 T 11-11-2016 S40542_RS20120 3c4835d82062e108c2c38ddac04b843b 217 SUPERFAMILY SSF53474 10 216 3.65E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS20120 3c4835d82062e108c2c38ddac04b843b 217 Pfam PF02230 Phospholipase/Carboxylesterase 8 212 3.4E-53 T 11-11-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 S40542_RS20120 3c4835d82062e108c2c38ddac04b843b 217 Gene3D G3DSA:3.40.50.1820 6 214 3.4E-65 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS16775 8d636f341f2278c154d72ce75270d3ce 544 Gene3D G3DSA:3.40.50.300 2 280 2.4E-130 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16775 8d636f341f2278c154d72ce75270d3ce 544 Pfam PF06418 CTP synthase N-terminus 4 265 2.5E-122 T 11-11-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 S40542_RS16775 8d636f341f2278c154d72ce75270d3ce 544 SUPERFAMILY SSF52317 289 542 3.85E-88 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS16775 8d636f341f2278c154d72ce75270d3ce 544 Pfam PF00117 Glutamine amidotransferase class-I 301 533 2.0E-62 T 11-11-2016 IPR017926 Glutamine amidotransferase S40542_RS16775 8d636f341f2278c154d72ce75270d3ce 544 Gene3D G3DSA:3.40.50.880 288 542 1.3E-99 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS16775 8d636f341f2278c154d72ce75270d3ce 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.8E-256 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 S40542_RS16775 8d636f341f2278c154d72ce75270d3ce 544 SUPERFAMILY SSF52540 3 269 4.96E-119 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16775 8d636f341f2278c154d72ce75270d3ce 544 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.842 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 S40542_RS16835 01d8989277925275ecf9eb4cbbb54be0 219 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 217 1.7E-93 T 11-11-2016 IPR014319 Phage shock protein, PspA S40542_RS16835 01d8989277925275ecf9eb4cbbb54be0 219 Pfam PF04012 PspA/IM30 family 2 215 4.2E-46 T 11-11-2016 IPR007157 PspA/IM30 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.6E-230 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Gene3D G3DSA:2.40.50.140 21 101 1.5E-11 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Gene3D G3DSA:2.40.50.140 192 275 4.1E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SUPERFAMILY SSF50249 255 364 8.58E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SUPERFAMILY SSF50249 103 185 1.25E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SUPERFAMILY SSF50249 363 448 2.31E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SUPERFAMILY SSF50249 429 537 2.09E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SUPERFAMILY SSF50249 1 112 1.23E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Gene3D G3DSA:2.40.50.140 102 172 3.0E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Gene3D G3DSA:2.40.50.140 276 357 4.5E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Gene3D G3DSA:2.40.50.140 445 532 5.0E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Gene3D G3DSA:2.40.50.140 362 444 2.2E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.1E-95 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Pfam PF00575 S1 RNA binding domain 361 434 5.1E-19 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Pfam PF00575 S1 RNA binding domain 449 520 3.1E-17 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Pfam PF00575 S1 RNA binding domain 191 260 4.1E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Pfam PF00575 S1 RNA binding domain 275 347 4.7E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Pfam PF00575 S1 RNA binding domain 106 171 1.5E-7 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 Pfam PF00575 S1 RNA binding domain 18 86 2.9E-6 T 11-11-2016 IPR003029 S1 domain GO:0003676 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SUPERFAMILY SSF50249 191 277 8.95E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SMART SM00316 275 347 5.0E-27 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SMART SM00316 103 171 1.7E-6 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SMART SM00316 19 87 6.0E-5 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SMART SM00316 362 434 1.7E-22 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SMART SM00316 190 260 5.9E-27 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS09495 22bfc4e8782ce1f6b39910f41cad50d1 555 SMART SM00316 449 520 2.8E-20 T 11-11-2016 IPR022967 RNA-binding domain, S1 S40542_RS20145 7c85ef364c237c2481b9d683cd193ce1 208 Pfam PF04340 Protein of unknown function, DUF484 6 201 4.0E-31 T 11-11-2016 IPR007435 Protein of unknown function DUF484 S40542_RS07065 924ee8d38b27de9915f43c1c8f525075 498 Gene3D G3DSA:3.50.50.60 318 362 7.9E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07065 924ee8d38b27de9915f43c1c8f525075 498 Gene3D G3DSA:3.50.50.60 3 74 7.9E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07065 924ee8d38b27de9915f43c1c8f525075 498 Gene3D G3DSA:3.50.50.60 155 235 7.9E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07065 924ee8d38b27de9915f43c1c8f525075 498 SUPERFAMILY SSF51905 5 89 1.37E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07065 924ee8d38b27de9915f43c1c8f525075 498 SUPERFAMILY SSF51905 323 424 1.37E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07065 924ee8d38b27de9915f43c1c8f525075 498 SUPERFAMILY SSF51905 139 237 1.37E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07065 924ee8d38b27de9915f43c1c8f525075 498 Pfam PF04820 Tryptophan halogenase 7 464 4.8E-174 T 11-11-2016 IPR006905 Tryptophan halogenase S40542_RS07065 924ee8d38b27de9915f43c1c8f525075 498 PIRSF PIRSF011396 1 498 3.6E-192 T 11-11-2016 IPR006905 Tryptophan halogenase S40542_RS16940 a54889d56d39dda0cf7e5b015ef112b6 152 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 41 148 3.1E-35 T 11-11-2016 IPR006056 RidA family S40542_RS16940 a54889d56d39dda0cf7e5b015ef112b6 152 Gene3D G3DSA:3.30.1330.40 39 150 2.1E-38 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS16940 a54889d56d39dda0cf7e5b015ef112b6 152 Pfam PF01042 Endoribonuclease L-PSP 41 149 9.6E-32 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family S40542_RS16940 a54889d56d39dda0cf7e5b015ef112b6 152 SUPERFAMILY SSF55298 39 150 8.95E-37 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS11015 b2f2d9bd9bbc87b84cff1e75071a77d4 171 Pfam PF07977 FabA-like domain 28 158 7.8E-53 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS11015 b2f2d9bd9bbc87b84cff1e75071a77d4 171 SUPERFAMILY SSF54637 2 168 1.64E-58 T 11-11-2016 IPR029069 HotDog domain S40542_RS11015 b2f2d9bd9bbc87b84cff1e75071a77d4 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 171 2.6E-91 T 11-11-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS11015 b2f2d9bd9bbc87b84cff1e75071a77d4 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 51.451 T 11-11-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS11015 b2f2d9bd9bbc87b84cff1e75071a77d4 171 Gene3D G3DSA:3.10.129.10 3 168 7.7E-59 T 11-11-2016 IPR029069 HotDog domain S40542_RS11395 1fda9f38053984920b6d8d8d7c501a95 200 Gene3D G3DSA:1.10.10.60 7 63 5.1E-20 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS11395 1fda9f38053984920b6d8d8d7c501a95 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 7.3E-17 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS11395 1fda9f38053984920b6d8d8d7c501a95 200 SUPERFAMILY SSF46689 6 66 1.7E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS11395 1fda9f38053984920b6d8d8d7c501a95 200 Gene3D G3DSA:1.10.357.10 64 193 2.3E-29 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 S40542_RS11395 1fda9f38053984920b6d8d8d7c501a95 200 SUPERFAMILY SSF48498 82 195 1.25E-10 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal S40542_RS11395 1fda9f38053984920b6d8d8d7c501a95 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.5E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS11395 1fda9f38053984920b6d8d8d7c501a95 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.5E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 S40542_RS04110 4e136b3549cb4c00e5b4ef60ee664474 292 TIGRFAM TIGR01932 hflC: HflC protein 145 287 2.0E-56 T 11-11-2016 IPR010200 HflC GO:0016021|GO:0052547 S40542_RS04110 4e136b3549cb4c00e5b4ef60ee664474 292 TIGRFAM TIGR01932 hflC: HflC protein 1 150 1.9E-50 T 11-11-2016 IPR010200 HflC GO:0016021|GO:0052547 S40542_RS04110 4e136b3549cb4c00e5b4ef60ee664474 292 SMART SM00244 18 187 1.7E-39 T 11-11-2016 IPR001107 Band 7 domain S40542_RS04110 4e136b3549cb4c00e5b4ef60ee664474 292 PIRSF PIRSF005651 1 292 4.8E-100 T 11-11-2016 IPR010200 HflC GO:0016021|GO:0052547 S40542_RS04110 4e136b3549cb4c00e5b4ef60ee664474 292 SUPERFAMILY SSF117892 56 192 3.92E-30 T 11-11-2016 IPR001107 Band 7 domain S40542_RS04110 4e136b3549cb4c00e5b4ef60ee664474 292 Pfam PF01145 SPFH domain / Band 7 family 22 203 2.3E-32 T 11-11-2016 IPR001107 Band 7 domain S40542_RS15020 0a0b396a388827c769cdb6e3ed4cb561 326 SUPERFAMILY SSF81324 234 326 1.44E-17 T 11-11-2016 S40542_RS15020 0a0b396a388827c769cdb6e3ed4cb561 326 Pfam PF00805 Pentapeptide repeats (8 copies) 89 125 1.4E-6 T 11-11-2016 IPR001646 Pentapeptide repeat S40542_RS15020 0a0b396a388827c769cdb6e3ed4cb561 326 SUPERFAMILY SSF141571 54 141 1.22E-14 T 11-11-2016 S40542_RS15020 0a0b396a388827c769cdb6e3ed4cb561 326 Pfam PF07885 Ion channel 241 325 1.3E-13 T 11-11-2016 IPR013099 Potassium channel domain S40542_RS15020 0a0b396a388827c769cdb6e3ed4cb561 326 Gene3D G3DSA:1.10.287.70 230 325 1.5E-19 T 11-11-2016 S40542_RS02620 fa678bff07dbac38a700461cc3ce9870 288 SUPERFAMILY SSF53850 30 241 6.4E-16 T 11-11-2016 S40542_RS01585 059d8d7e3f8bedd7296332fb8cdb84e2 122 Pfam PF12290 Protein of unknown function (DUF3802) 11 122 2.9E-41 T 11-11-2016 IPR020979 Uncharacterised protein family A0KLC6 S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 Pfam PF00072 Response regulator receiver domain 4 116 4.8E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 SUPERFAMILY SSF47384 131 187 9.81E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 SUPERFAMILY SSF52172 2 126 8.4E-38 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 Gene3D G3DSA:1.10.287.130 131 187 3.2E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 Gene3D G3DSA:3.30.565.10 239 365 2.2E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 SUPERFAMILY SSF55874 232 341 4.45E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 SMART SM00448 2 115 2.5E-38 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 Gene3D G3DSA:3.40.50.2300 1 121 2.8E-38 T 11-11-2016 S40542_RS09000 1b4eaa2f1eeaacb5423f17f26d6842dc 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 258 358 3.0E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS20385 9a68efc135955424aeffc35dd61fb7e8 72 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 11 72 1.2E-22 T 11-11-2016 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich S40542_RS20385 9a68efc135955424aeffc35dd61fb7e8 72 Pfam PF09493 Tryptophan-rich protein (DUF2389) 13 72 3.9E-21 T 11-11-2016 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich S40542_RS05190 238541d78adc644426b03e8c3865ac62 372 Pfam PF07075 Protein of unknown function (DUF1343) 29 370 8.8E-119 T 11-11-2016 IPR008302 Uncharacterised conserved protein UCP016719 S40542_RS05190 238541d78adc644426b03e8c3865ac62 372 PIRSF PIRSF016719 3 371 2.8E-101 T 11-11-2016 IPR008302 Uncharacterised conserved protein UCP016719 S40542_RS08925 462cb6fab3744035b861ea1aacf8d38e 293 Pfam PF07676 WD40-like Beta Propeller Repeat 189 224 0.021 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS08925 462cb6fab3744035b861ea1aacf8d38e 293 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 0.0018 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS08925 462cb6fab3744035b861ea1aacf8d38e 293 Gene3D G3DSA:2.130.10.10 153 278 5.4E-9 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS08925 462cb6fab3744035b861ea1aacf8d38e 293 Gene3D G3DSA:2.130.10.10 56 119 5.4E-9 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS08925 462cb6fab3744035b861ea1aacf8d38e 293 SUPERFAMILY SSF82171 56 278 2.09E-12 T 11-11-2016 S40542_RS13560 591004c46bfea98ef44854fe7552e7c0 353 PIRSF PIRSF005508 1 347 4.0E-125 T 11-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 S40542_RS13560 591004c46bfea98ef44854fe7552e7c0 353 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 2 330 1.7E-123 T 11-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 S40542_RS13560 591004c46bfea98ef44854fe7552e7c0 353 Pfam PF01758 Sodium Bile acid symporter family 47 243 3.6E-46 T 11-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 S40542_RS03980 6baac9ff32816bff7e348f2989b19bf5 452 Pfam PF16325 Peptidase family U32 C-terminal domain 356 437 3.5E-19 T 11-11-2016 IPR032525 Peptidase family U32, C-terminal S40542_RS03980 6baac9ff32816bff7e348f2989b19bf5 452 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 S40542_RS03980 6baac9ff32816bff7e348f2989b19bf5 452 Pfam PF01136 Peptidase family U32 76 341 9.7E-97 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 S40542_RS04615 a5a56f06939eba40b8b0f33387e383e3 449 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 444 1.9E-98 T 11-11-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 S40542_RS04615 a5a56f06939eba40b8b0f33387e383e3 449 Gene3D G3DSA:1.20.1600.10 19 436 9.7E-78 T 11-11-2016 S40542_RS04615 a5a56f06939eba40b8b0f33387e383e3 449 SUPERFAMILY SSF56954 3 433 6.02E-85 T 11-11-2016 S40542_RS04615 a5a56f06939eba40b8b0f33387e383e3 449 Pfam PF02321 Outer membrane efflux protein 26 221 2.2E-23 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 S40542_RS04615 a5a56f06939eba40b8b0f33387e383e3 449 Pfam PF02321 Outer membrane efflux protein 247 431 7.2E-35 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 S40542_RS02695 c80accc33f7b5ccebe40642275cf7f32 208 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 2 204 2.4E-78 T 11-11-2016 IPR017509 Putative peptide chain release factor H S40542_RS02695 c80accc33f7b5ccebe40642275cf7f32 208 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 118 134 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 S40542_RS02695 c80accc33f7b5ccebe40642275cf7f32 208 Pfam PF00472 RF-1 domain 111 185 1.4E-20 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 S40542_RS02695 c80accc33f7b5ccebe40642275cf7f32 208 Gene3D G3DSA:3.30.160.20 111 175 2.1E-22 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain S40542_RS02695 c80accc33f7b5ccebe40642275cf7f32 208 SUPERFAMILY SSF75620 3 199 9.16E-41 T 11-11-2016 S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 SUPERFAMILY SSF53335 4 159 3.85E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 68 - T 11-11-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 2 232 49.708 T 11-11-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 39 53 3.8E-5 T 11-11-2016 S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 133 157 3.8E-5 T 11-11-2016 S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 103 115 3.8E-5 T 11-11-2016 S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 Pfam PF05175 Methyltransferase small domain 33 127 1.4E-12 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 106 112 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS05110 e38e01232e5d491247d6ee0c39ef8a03 232 Gene3D G3DSA:3.40.50.150 23 226 4.7E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01595 ce3bd32f12c555e2444380d7da140b1e 269 Gene3D G3DSA:3.60.90.10 39 189 2.2E-43 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 S40542_RS01595 ce3bd32f12c555e2444380d7da140b1e 269 PIRSF PIRSF001356 2 267 1.1E-143 T 11-11-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 S40542_RS01595 ce3bd32f12c555e2444380d7da140b1e 269 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 265 2.1E-145 T 11-11-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 S40542_RS01595 ce3bd32f12c555e2444380d7da140b1e 269 Pfam PF02675 S-adenosylmethionine decarboxylase 42 173 1.2E-28 T 11-11-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 S40542_RS01595 ce3bd32f12c555e2444380d7da140b1e 269 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 269 164.443 T 11-11-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 S40542_RS01595 ce3bd32f12c555e2444380d7da140b1e 269 SUPERFAMILY SSF56276 116 178 2.86E-22 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 S40542_RS01595 ce3bd32f12c555e2444380d7da140b1e 269 SUPERFAMILY SSF56276 47 88 2.86E-22 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 S40542_RS11545 00f2f7f56afe580f74ced67661db9987 168 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 164 1.9E-46 T 11-11-2016 IPR018639 Domain of unknown function DUF2062 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 Pfam PF01391 Collagen triple helix repeat (20 copies) 21 63 4.2E-8 T 11-11-2016 IPR008160 Collagen triple helix repeat S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 Gene3D G3DSA:2.130.10.10 566 608 2.2E-15 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 Gene3D G3DSA:2.130.10.10 400 418 2.2E-15 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 Gene3D G3DSA:2.130.10.10 463 477 2.2E-15 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 Gene3D G3DSA:2.130.10.10 290 336 2.2E-15 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 Gene3D G3DSA:2.130.10.10 84 250 2.2E-15 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 SUPERFAMILY SSF75011 462 609 7.45E-19 T 11-11-2016 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 SUPERFAMILY SSF75011 291 333 7.45E-19 T 11-11-2016 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 SUPERFAMILY SSF75011 175 254 7.45E-19 T 11-11-2016 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 SUPERFAMILY SSF75011 89 106 7.45E-19 T 11-11-2016 S40542_RS05785 6cd678e5da8ec4fe261e6c048ee2908a 610 SUPERFAMILY SSF75011 399 415 7.45E-19 T 11-11-2016 S40542_RS02570 bae494a4716d80ef0a79ed557e3c4eaf 190 SUPERFAMILY SSF103025 23 181 2.88E-5 T 11-11-2016 S40542_RS09585 3a711dca1c3184a03255ec72635c2a41 195 Pfam PF16694 Cytochrome P460 105 187 1.5E-9 T 11-11-2016 IPR032033 Cytochrome P460 S40542_RS13450 76a510a313c408a53abb457f60d464d9 300 SMART SM00382 29 209 8.2E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS13450 76a510a313c408a53abb457f60d464d9 300 SUPERFAMILY SSF52540 4 211 5.43E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS13450 76a510a313c408a53abb457f60d464d9 300 Gene3D G3DSA:3.40.50.300 2 222 1.1E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS13450 76a510a313c408a53abb457f60d464d9 300 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS13450 76a510a313c408a53abb457f60d464d9 300 Pfam PF00005 ABC transporter 20 162 1.3E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS12505 a8c9f09c1a078db8ea52508a27e5b160 119 Gene3D G3DSA:3.40.50.2300 1 118 1.2E-36 T 11-11-2016 S40542_RS12505 a8c9f09c1a078db8ea52508a27e5b160 119 Pfam PF00072 Response regulator receiver domain 3 114 6.3E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS12505 a8c9f09c1a078db8ea52508a27e5b160 119 SUPERFAMILY SSF52172 1 118 4.7E-36 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS12505 a8c9f09c1a078db8ea52508a27e5b160 119 SMART SM00448 1 115 7.7E-37 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 1.5E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 1.5E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.5E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 1.5E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 13 179 1.2E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 SUPERFAMILY SSF56784 9 191 8.67E-39 T 11-11-2016 IPR023214 HAD-like domain S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 Gene3D G3DSA:3.40.50.1000 90 186 6.8E-38 T 11-11-2016 IPR023214 HAD-like domain S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 185 2.9E-25 T 11-11-2016 IPR023214 HAD-like domain S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 Gene3D G3DSA:3.40.50.1000 5 79 5.1E-5 T 11-11-2016 IPR023214 HAD-like domain S40542_RS02480 ff297dc9278d434ef782d59410e41f5c 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 42 185 9.4E-13 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 S40542_RS00755 3572c70dd084b3621a20be9c631e7cbf 149 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 5 114 4.1E-20 T 11-11-2016 IPR012659 Conserved hypothetical protein CHP02444 S40542_RS00755 3572c70dd084b3621a20be9c631e7cbf 149 Pfam PF09523 Protein of unknown function (DUF2390) 7 113 7.5E-26 T 11-11-2016 IPR012659 Conserved hypothetical protein CHP02444 S40542_RS04150 57bc870a2ec190f1a5cf9b1c8da75208 172 Pfam PF04073 Aminoacyl-tRNA editing domain 32 149 1.7E-19 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 S40542_RS04150 57bc870a2ec190f1a5cf9b1c8da75208 172 Gene3D G3DSA:3.90.960.10 8 165 6.2E-48 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 S40542_RS04150 57bc870a2ec190f1a5cf9b1c8da75208 172 SUPERFAMILY SSF55826 5 163 1.09E-33 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 S40542_RS20330 0aab033b06006c1c42bae1965b98ff89 385 Gene3D G3DSA:3.40.630.30 180 334 5.5E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS20330 0aab033b06006c1c42bae1965b98ff89 385 SUPERFAMILY SSF55729 180 359 2.75E-36 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS20330 0aab033b06006c1c42bae1965b98ff89 385 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 384 2.9E-137 T 11-11-2016 IPR007434 Peptidogalycan biosysnthesis/recognition S40542_RS17990 069c7a70260ab6590de767a45191d6c2 234 SUPERFAMILY SSF52540 1 218 9.01E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17990 069c7a70260ab6590de767a45191d6c2 234 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.4E-87 T 11-11-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 S40542_RS17990 069c7a70260ab6590de767a45191d6c2 234 Gene3D G3DSA:3.40.50.300 1 217 5.3E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17990 069c7a70260ab6590de767a45191d6c2 234 Pfam PF00005 ABC transporter 18 165 1.8E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS17990 069c7a70260ab6590de767a45191d6c2 234 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS17990 069c7a70260ab6590de767a45191d6c2 234 SMART SM00382 27 216 3.4E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS19240 a490cfcd1e90044c275a614905308491 269 Gene3D G3DSA:3.20.190.10 2 129 2.4E-34 T 11-11-2016 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 Gene3D G3DSA:1.10.8.50 130 269 7.9E-49 T 11-11-2016 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 2.2E-28 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 SUPERFAMILY SSF46946 130 221 3.4E-29 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.4E-90 T 11-11-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 1.2E-8 T 11-11-2016 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 SMART SM00898 2 115 3.9E-45 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.402 T 11-11-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 SUPERFAMILY SSF57716 217 268 2.77E-16 T 11-11-2016 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 6.9E-26 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 SMART SM01232 129 221 1.4E-46 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 S40542_RS19240 a490cfcd1e90044c275a614905308491 269 SUPERFAMILY SSF81624 2 138 6.93E-38 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 S40542_RS18385 74a5c48727de4bd6a1153262ad9e157c 212 Gene3D G3DSA:1.20.950.20 32 173 8.4E-5 T 11-11-2016 S40542_RS18385 74a5c48727de4bd6a1153262ad9e157c 212 SUPERFAMILY SSF81342 1 174 1.65E-28 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 S40542_RS18385 74a5c48727de4bd6a1153262ad9e157c 212 Pfam PF01292 Prokaryotic cytochrome b561 4 170 1.6E-17 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 S40542_RS05765 ce31c61f35eac5c8bef53755d991d126 278 Pfam PF12048 Protein of unknown function (DUF3530) 26 276 1.7E-29 T 11-11-2016 IPR022529 Protein of unknown function DUF3530 S40542_RS16380 9ac34de938da75c9922ada86b28031c7 295 SUPERFAMILY SSF103481 41 141 1.96E-12 T 11-11-2016 S40542_RS16380 9ac34de938da75c9922ada86b28031c7 295 SUPERFAMILY SSF103481 190 294 6.28E-7 T 11-11-2016 S40542_RS16380 9ac34de938da75c9922ada86b28031c7 295 Pfam PF00892 EamA-like transporter family 153 293 1.3E-14 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS16380 9ac34de938da75c9922ada86b28031c7 295 Pfam PF00892 EamA-like transporter family 3 136 1.5E-20 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS12480 d002f90c094b9ed5291dfa7c2409ec86 160 SUPERFAMILY SSF54637 3 147 1.69E-38 T 11-11-2016 IPR029069 HotDog domain S40542_RS12480 d002f90c094b9ed5291dfa7c2409ec86 160 Pfam PF03061 Thioesterase superfamily 21 95 8.0E-20 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 S40542_RS12480 d002f90c094b9ed5291dfa7c2409ec86 160 Gene3D G3DSA:3.10.129.10 3 138 1.2E-40 T 11-11-2016 IPR029069 HotDog domain S40542_RS02760 7655039dd183327d9d11535c0e729175 182 Gene3D G3DSA:2.60.40.200 33 178 2.4E-35 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS02760 7655039dd183327d9d11535c0e729175 182 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 40 178 7.5E-30 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS02760 7655039dd183327d9d11535c0e729175 182 SUPERFAMILY SSF49329 33 178 3.66E-33 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS02760 7655039dd183327d9d11535c0e729175 182 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 167 178 - T 11-11-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 S40542_RS15655 f3ca32ada668da4f0cb3333e6dca3931 161 SUPERFAMILY SSF54534 2 139 4.52E-37 T 11-11-2016 S40542_RS15655 f3ca32ada668da4f0cb3333e6dca3931 161 Gene3D G3DSA:3.10.50.40 125 140 6.8E-22 T 11-11-2016 S40542_RS15655 f3ca32ada668da4f0cb3333e6dca3931 161 Gene3D G3DSA:3.10.50.40 2 80 6.8E-22 T 11-11-2016 S40542_RS15655 f3ca32ada668da4f0cb3333e6dca3931 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 4.0E-15 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 S40542_RS00715 956d0e936c7d8638f24ab3e3c5b59603 263 Gene3D G3DSA:3.40.190.80 155 249 9.7E-33 T 11-11-2016 S40542_RS00715 956d0e936c7d8638f24ab3e3c5b59603 263 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 5 247 4.0E-85 T 11-11-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 S40542_RS00715 956d0e936c7d8638f24ab3e3c5b59603 263 Gene3D G3DSA:3.30.540.10 2 154 2.5E-41 T 11-11-2016 S40542_RS00715 956d0e936c7d8638f24ab3e3c5b59603 263 SUPERFAMILY SSF56655 2 256 2.23E-71 T 11-11-2016 S40542_RS00715 956d0e936c7d8638f24ab3e3c5b59603 263 Pfam PF00459 Inositol monophosphatase family 6 241 1.3E-46 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 S40542_RS02245 1979c098069d89d0e2fbdaec708ba3c9 228 SMART SM00382 28 224 3.8E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS02245 1979c098069d89d0e2fbdaec708ba3c9 228 SUPERFAMILY SSF52540 2 221 9.35E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02245 1979c098069d89d0e2fbdaec708ba3c9 228 Gene3D G3DSA:3.40.50.300 1 222 1.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02245 1979c098069d89d0e2fbdaec708ba3c9 228 Pfam PF00005 ABC transporter 23 176 3.2E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS13355 641b2671d893aec6e2c6f638dcafe598 332 Gene3D G3DSA:3.60.10.10 16 330 3.1E-12 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS13355 641b2671d893aec6e2c6f638dcafe598 332 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 284 8.4E-22 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS13355 641b2671d893aec6e2c6f638dcafe598 332 SUPERFAMILY SSF56219 21 330 3.6E-55 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS16495 9d7fd41a7359414735e22ac32c803eaf 660 Pfam PF16075 Domain of unknown function (DUF4815) 5 590 3.6E-183 T 11-11-2016 IPR032096 Domain of unknown function DUF4815 S40542_RS02820 c2b544b3af626be2037f7aac6110ae43 490 SUPERFAMILY SSF53474 171 464 1.56E-31 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02820 c2b544b3af626be2037f7aac6110ae43 490 SUPERFAMILY SSF53474 48 132 1.56E-31 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02820 c2b544b3af626be2037f7aac6110ae43 490 Gene3D G3DSA:3.40.50.1820 52 134 1.5E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02820 c2b544b3af626be2037f7aac6110ae43 490 Gene3D G3DSA:3.40.50.1820 174 289 1.5E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02820 c2b544b3af626be2037f7aac6110ae43 490 Gene3D G3DSA:3.40.50.1820 351 467 1.5E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS02820 c2b544b3af626be2037f7aac6110ae43 490 Pfam PF00561 alpha/beta hydrolase fold 85 454 6.0E-20 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS05035 74623c315a8e6264dff34812177ae3c3 330 Pfam PF01032 FecCD transport family 13 322 5.7E-90 T 11-11-2016 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 S40542_RS05035 74623c315a8e6264dff34812177ae3c3 330 SUPERFAMILY SSF81345 5 322 2.35E-76 T 11-11-2016 IPR029022 ABC transporter, BtuC-like S40542_RS05035 74623c315a8e6264dff34812177ae3c3 330 Gene3D G3DSA:1.10.3470.10 5 326 2.1E-99 T 11-11-2016 IPR029022 ABC transporter, BtuC-like S40542_RS04245 19911b2ba34d5b1a1af23e381066dafa 166 Gene3D G3DSA:3.10.450.50 29 146 3.3E-11 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS04245 19911b2ba34d5b1a1af23e381066dafa 166 SUPERFAMILY SSF54427 28 151 1.83E-13 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS04245 19911b2ba34d5b1a1af23e381066dafa 166 Pfam PF12680 SnoaL-like domain 34 141 6.3E-7 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain S40542_RS07965 73d26fce7a33c710c7866a30333a39fe 389 SUPERFAMILY SSF52172 4 147 6.55E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07965 73d26fce7a33c710c7866a30333a39fe 389 SMART SM00448 5 117 6.7E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07965 73d26fce7a33c710c7866a30333a39fe 389 Gene3D G3DSA:3.40.50.2300 3 131 4.3E-33 T 11-11-2016 S40542_RS07965 73d26fce7a33c710c7866a30333a39fe 389 Pfam PF00072 Response regulator receiver domain 7 118 1.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS18470 3fdfecffd76ba097c5593ef37ae378d9 311 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 224 5.5E-28 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 S40542_RS18470 3fdfecffd76ba097c5593ef37ae378d9 311 SUPERFAMILY SSF51735 3 308 6.97E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18470 3fdfecffd76ba097c5593ef37ae378d9 311 Gene3D G3DSA:3.40.50.720 3 305 6.6E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13900 913577e2f19c4a2cea583b17ab42e361 232 Gene3D G3DSA:3.40.1080.10 6 218 1.8E-97 T 11-11-2016 S40542_RS13900 913577e2f19c4a2cea583b17ab42e361 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 218 6.5E-76 T 11-11-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 S40542_RS13900 913577e2f19c4a2cea583b17ab42e361 232 SUPERFAMILY SSF100950 5 226 7.18E-87 T 11-11-2016 S40542_RS13900 913577e2f19c4a2cea583b17ab42e361 232 Pfam PF01144 Coenzyme A transferase 9 218 1.3E-73 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 S40542_RS13900 913577e2f19c4a2cea583b17ab42e361 232 SMART SM00882 8 219 2.5E-88 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 S40542_RS13900 913577e2f19c4a2cea583b17ab42e361 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 11-11-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 S40542_RS20525 43c763de42808a03fa66b8c8e298e7cc 803 Pfam PF02687 FtsX-like permease family 284 395 1.1E-14 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS20525 43c763de42808a03fa66b8c8e298e7cc 803 Pfam PF02687 FtsX-like permease family 683 796 3.3E-12 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS20525 43c763de42808a03fa66b8c8e298e7cc 803 Pfam PF12704 MacB-like periplasmic core domain 21 236 4.9E-13 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS19125 d7895035796760f74a77b651f75e4091 224 Pfam PF00436 Single-strand binding protein family 5 112 5.4E-43 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 S40542_RS19125 d7895035796760f74a77b651f75e4091 224 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 224 4.6E-53 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 S40542_RS19125 d7895035796760f74a77b651f75e4091 224 Gene3D G3DSA:2.40.50.140 1 126 4.4E-52 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19125 d7895035796760f74a77b651f75e4091 224 Gene3D G3DSA:2.40.50.140 204 224 4.4E-52 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19125 d7895035796760f74a77b651f75e4091 224 SUPERFAMILY SSF50249 3 170 6.85E-56 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold S40542_RS19125 d7895035796760f74a77b651f75e4091 224 Hamap MF_00984 Single-stranded DNA-binding protein. 5 116 39.781 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 S40542_RS02125 0aeea288c4a6a62120ffb093ed990994 195 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 20 115 1.6E-11 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 S40542_RS02125 0aeea288c4a6a62120ffb093ed990994 195 SUPERFAMILY SSF101327 18 150 1.7E-11 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 S40542_RS02125 0aeea288c4a6a62120ffb093ed990994 195 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 147 1.3E-13 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 S40542_RS10390 9890c1ebd8746e08a228c8f8f8f38405 138 Gene3D G3DSA:1.10.530.40 4 135 7.4E-29 T 11-11-2016 IPR023347 Lysozyme domain GO:0003796 S40542_RS10390 9890c1ebd8746e08a228c8f8f8f38405 138 SUPERFAMILY SSF53955 4 135 1.28E-32 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS10390 9890c1ebd8746e08a228c8f8f8f38405 138 Pfam PF00959 Phage lysozyme 27 118 2.1E-9 T 11-11-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 S40542_RS19045 af7fc440e436820888cb9e37f6abd6af 281 PIRSF PIRSF005052 1 281 1.8E-108 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 S40542_RS19045 af7fc440e436820888cb9e37f6abd6af 281 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 39.927 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 S40542_RS19045 af7fc440e436820888cb9e37f6abd6af 281 Gene3D G3DSA:3.40.50.300 3 151 3.9E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19045 af7fc440e436820888cb9e37f6abd6af 281 SUPERFAMILY SSF52540 3 151 1.08E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19045 af7fc440e436820888cb9e37f6abd6af 281 Pfam PF03668 P-loop ATPase protein family 1 280 8.6E-114 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 S40542_RS21170 1b18b544d43e3b1c6e65e466962cdf82 160 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 1 160 4.5E-59 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 S40542_RS21170 1b18b544d43e3b1c6e65e466962cdf82 160 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 93 107 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 S40542_RS21170 1b18b544d43e3b1c6e65e466962cdf82 160 Pfam PF01209 ubiE/COQ5 methyltransferase family 2 160 1.3E-66 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 S40542_RS21170 1b18b544d43e3b1c6e65e466962cdf82 160 SUPERFAMILY SSF53335 1 155 1.04E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS21170 1b18b544d43e3b1c6e65e466962cdf82 160 Gene3D G3DSA:3.40.50.150 1 160 9.3E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS11525 962142524673620df05a00b65ba31ca2 65 SUPERFAMILY SSF158997 1 56 1.44E-20 T 11-11-2016 S40542_RS11525 962142524673620df05a00b65ba31ca2 65 Gene3D G3DSA:2.20.25.10 10 63 2.6E-25 T 11-11-2016 S40542_RS11525 962142524673620df05a00b65ba31ca2 65 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 27.34 T 11-11-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 S40542_RS11525 962142524673620df05a00b65ba31ca2 65 Pfam PF03966 Trm112p-like protein 5 42 1.5E-8 T 11-11-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 S40542_RS03490 f36632a3d6b0d2e69c05c7e3fe625fc4 286 Pfam PF08340 Domain of unknown function (DUF1732) 202 286 6.7E-35 T 11-11-2016 IPR013551 Domain of unknown function DUF1732 S40542_RS03490 f36632a3d6b0d2e69c05c7e3fe625fc4 286 Pfam PF03755 YicC-like family, N-terminal region 2 152 2.6E-41 T 11-11-2016 IPR013527 YicC-like, N-terminal S40542_RS03490 f36632a3d6b0d2e69c05c7e3fe625fc4 286 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 286 5.4E-111 T 11-11-2016 IPR005229 Conserved hypothetical protein CHP00255 S40542_RS04760 7a760b8af760cb214f79696d1909e061 274 Gene3D G3DSA:1.20.1540.10 95 266 2.4E-22 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 S40542_RS04760 7a760b8af760cb214f79696d1909e061 274 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 264 3.0E-76 T 11-11-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 S40542_RS04760 7a760b8af760cb214f79696d1909e061 274 SUPERFAMILY SSF144091 95 268 1.7E-28 T 11-11-2016 S40542_RS04760 7a760b8af760cb214f79696d1909e061 274 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 3.7E-19 T 11-11-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 S40542_RS04760 7a760b8af760cb214f79696d1909e061 274 Pfam PF01694 Rhomboid family 131 267 6.5E-21 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 S40542_RS10340 feacc78efe648f770ca9b1207b9317d5 211 SUPERFAMILY SSF52540 4 140 4.91E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08190 a56670b89ab2f9e8057f2a7f5656aee3 305 Gene3D G3DSA:3.40.50.1820 23 301 1.1E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08190 a56670b89ab2f9e8057f2a7f5656aee3 305 SUPERFAMILY SSF53474 28 297 1.42E-37 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08190 a56670b89ab2f9e8057f2a7f5656aee3 305 Pfam PF00561 alpha/beta hydrolase fold 29 226 1.8E-11 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS02025 5e15d5d5bba6365b53961348c2b278bb 302 Pfam PF12118 SprA-related family 37 217 3.1E-44 T 11-11-2016 IPR021973 SprA-related family S40542_RS01950 c9b76b7a35fcbc014b3eb4421c91c58e 90 Gene3D G3DSA:3.30.750.24 2 86 1.5E-7 T 11-11-2016 IPR002645 STAS domain S40542_RS01950 c9b76b7a35fcbc014b3eb4421c91c58e 90 Pfam PF13466 STAS domain 2 80 4.4E-13 T 11-11-2016 IPR002645 STAS domain S40542_RS01950 c9b76b7a35fcbc014b3eb4421c91c58e 90 SUPERFAMILY SSF52091 2 85 1.45E-9 T 11-11-2016 IPR002645 STAS domain S40542_RS17045 34c24423e48cb9ef15bc3902a79513ee 242 Pfam PF05036 Sporulation related domain 164 227 5.0E-11 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS17045 34c24423e48cb9ef15bc3902a79513ee 242 Gene3D G3DSA:3.30.70.1070 161 236 2.3E-15 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS17045 34c24423e48cb9ef15bc3902a79513ee 242 SUPERFAMILY SSF110997 162 233 2.09E-14 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS10435 ccb56d865d9d62843ad148e183c33068 548 ProDom PD223702 DNA TRANSPOSASE DNA-BINDING TRANSPOSABLE INTEGRATION ELEMENT RECOMBINATION TRANSPOSASE EXCISION TRANSPOSITION 194 307 3.0E-5 T 11-11-2016 S40542_RS10435 ccb56d865d9d62843ad148e183c33068 548 Gene3D G3DSA:3.30.420.10 176 384 1.8E-58 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS10435 ccb56d865d9d62843ad148e183c33068 548 Gene3D G3DSA:2.30.30.130 395 448 5.7E-9 T 11-11-2016 IPR009004 Transposase, Mu, C-terminal S40542_RS10435 ccb56d865d9d62843ad148e183c33068 548 SUPERFAMILY SSF53098 186 381 1.0E-50 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS10435 ccb56d865d9d62843ad148e183c33068 548 Pfam PF09299 Mu transposase, C-terminal 392 449 1.0E-9 T 11-11-2016 IPR015378 Transposase-like, Mu, C-terminal S40542_RS10435 ccb56d865d9d62843ad148e183c33068 548 Pfam PF00665 Integrase core domain 199 311 1.6E-11 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 S40542_RS10435 ccb56d865d9d62843ad148e183c33068 548 SUPERFAMILY SSF50610 396 450 1.44E-8 T 11-11-2016 IPR009004 Transposase, Mu, C-terminal S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 Gene3D G3DSA:2.40.30.10 3 85 1.3E-19 T 11-11-2016 S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 1.9E-20 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 SUPERFAMILY SSF52343 104 234 1.57E-33 T 11-11-2016 S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 Gene3D G3DSA:3.40.50.80 104 234 1.2E-33 T 11-11-2016 S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 4.7E-10 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 4.7E-10 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 4.7E-10 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 4.7E-10 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS20085 23a213e47a66e94790a0cbc1adfc856b 237 SUPERFAMILY SSF63380 3 82 2.33E-12 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS06335 c91dc70ade602738b44e9f89fe342964 333 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 4.6E-166 T 11-11-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 S40542_RS06335 c91dc70ade602738b44e9f89fe342964 333 SUPERFAMILY SSF51735 1 261 6.88E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06335 c91dc70ade602738b44e9f89fe342964 333 Gene3D G3DSA:3.40.50.720 5 222 7.9E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06335 c91dc70ade602738b44e9f89fe342964 333 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 1.6E-102 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain S40542_RS12205 d528de76acd5bc4fd1f2559f66a843e2 614 SUPERFAMILY SSF56300 384 509 2.47E-7 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12205 d528de76acd5bc4fd1f2559f66a843e2 614 SUPERFAMILY SSF56300 142 177 2.47E-7 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12205 d528de76acd5bc4fd1f2559f66a843e2 614 SUPERFAMILY SSF56300 295 314 2.47E-7 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12205 d528de76acd5bc4fd1f2559f66a843e2 614 Gene3D G3DSA:3.60.21.10 259 313 3.5E-4 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12205 d528de76acd5bc4fd1f2559f66a843e2 614 Gene3D G3DSA:3.60.21.10 123 159 3.5E-4 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12205 d528de76acd5bc4fd1f2559f66a843e2 614 Gene3D G3DSA:3.60.21.10 366 528 3.5E-4 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS20780 6cc3a3fa5ebdfe26df591c3184181701 222 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 22 212 7.3E-20 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 S40542_RS05220 4da5ff5dbdb7301aa028e4be01f024d2 168 Pfam PF11286 Protein of unknown function (DUF3087) 1 165 4.2E-63 T 11-11-2016 IPR021438 Protein of unknown function DUF3087 S40542_RS03285 587b8b6d6793c5acb1ff346558237ec4 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.822 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 S40542_RS03285 587b8b6d6793c5acb1ff346558237ec4 90 PIRSF PIRSF029827 1 90 1.5E-42 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 S40542_RS03285 587b8b6d6793c5acb1ff346558237ec4 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 9.2E-43 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 S40542_RS03285 587b8b6d6793c5acb1ff346558237ec4 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-34 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 S40542_RS03285 587b8b6d6793c5acb1ff346558237ec4 90 Gene3D G3DSA:1.10.3880.10 1 90 8.6E-44 T 11-11-2016 S40542_RS03285 587b8b6d6793c5acb1ff346558237ec4 90 SUPERFAMILY SSF111148 1 89 1.09E-40 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 S40542_RS17880 6bfd1bf2f27d2b2ce54cf7d3e36b2aed 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.737 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS17880 6bfd1bf2f27d2b2ce54cf7d3e36b2aed 80 Gene3D G3DSA:1.10.287.1040 5 77 9.8E-28 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS17880 6bfd1bf2f27d2b2ce54cf7d3e36b2aed 80 SUPERFAMILY SSF116842 2 74 5.23E-23 T 11-11-2016 S40542_RS17880 6bfd1bf2f27d2b2ce54cf7d3e36b2aed 80 PIRSF PIRSF006488 1 80 9.6E-25 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS17880 6bfd1bf2f27d2b2ce54cf7d3e36b2aed 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 46 6.0E-13 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS17880 6bfd1bf2f27d2b2ce54cf7d3e36b2aed 80 Pfam PF02609 Exonuclease VII small subunit 11 62 6.5E-21 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS17880 6bfd1bf2f27d2b2ce54cf7d3e36b2aed 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.8E-23 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS08055 e52cabff00ff37523bbc14bd99ce3d2e 149 Gene3D G3DSA:2.60.40.790 11 141 1.9E-20 T 11-11-2016 IPR008978 HSP20-like chaperone S40542_RS08055 e52cabff00ff37523bbc14bd99ce3d2e 149 Pfam PF00011 Hsp20/alpha crystallin family 45 140 4.4E-19 T 11-11-2016 IPR002068 Alpha crystallin/Hsp20 domain S40542_RS08055 e52cabff00ff37523bbc14bd99ce3d2e 149 SUPERFAMILY SSF49764 17 140 4.53E-22 T 11-11-2016 IPR008978 HSP20-like chaperone S40542_RS09430 5a7052c8bb348268a3bdebe8c2880518 154 Pfam PF04224 Protein of unknown function, DUF417 7 145 4.4E-25 T 11-11-2016 IPR007339 Protein of unknown function DUF417 S40542_RS09430 5a7052c8bb348268a3bdebe8c2880518 154 PIRSF PIRSF028065 2 151 1.2E-27 T 11-11-2016 IPR016865 Uncharacterised conserved protein UCP028065, membrane S40542_RS19430 e2b62724a6807e32d2802332897c003a 337 Gene3D G3DSA:3.20.20.70 97 312 2.0E-18 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS19430 e2b62724a6807e32d2802332897c003a 337 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 13 332 1.3E-149 T 11-11-2016 IPR022462 Lysine-2,3-aminomutase-like S40542_RS19430 e2b62724a6807e32d2802332897c003a 337 Pfam PF04055 Radical SAM superfamily 115 259 3.4E-9 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS19430 e2b62724a6807e32d2802332897c003a 337 SUPERFAMILY SSF102114 97 321 3.14E-27 T 11-11-2016 S40542_RS19430 e2b62724a6807e32d2802332897c003a 337 PIRSF PIRSF004911 3 337 3.7E-115 T 11-11-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase S40542_RS19430 e2b62724a6807e32d2802332897c003a 337 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 325 3.3E-117 T 11-11-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase S40542_RS19430 e2b62724a6807e32d2802332897c003a 337 Pfam PF13353 4Fe-4S single cluster domain 111 178 2.1E-7 T 11-11-2016 S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 Gene3D G3DSA:3.40.50.1820 20 160 5.7E-62 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 Gene3D G3DSA:3.40.50.1820 228 349 5.7E-62 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 26 561 4.4E-57 T 11-11-2016 IPR005674 CocE/Serine esterase GO:0016787 S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 SUPERFAMILY SSF53474 16 351 2.56E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 SMART SM00939 319 556 5.2E-5 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 SUPERFAMILY SSF49785 378 559 5.31E-16 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 354 556 2.6E-11 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 Gene3D G3DSA:2.60.120.260 377 563 9.1E-19 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS03075 c31bca2c57af90dfc158505e29dab9d4 576 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 29 292 1.1E-48 T 11-11-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 SUPERFAMILY SSF52210 129 287 1.26E-42 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 149 286 7.3E-53 T 11-11-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 Pfam PF13302 Acetyltransferase (GNAT) domain 734 871 1.1E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 Gene3D G3DSA:3.40.50.720 3 129 1.9E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 Gene3D G3DSA:3.40.50.261 296 446 1.5E-16 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 SMART SM00881 9 104 1.2E-26 T 11-11-2016 IPR003781 CoA-binding GO:0048037 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 SUPERFAMILY SSF51735 2 137 9.85E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 Pfam PF13380 CoA binding domain 13 132 3.2E-21 T 11-11-2016 IPR003781 CoA-binding GO:0048037 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 SUPERFAMILY SSF52210 297 454 8.5E-31 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 Gene3D G3DSA:3.40.50.261 130 285 3.3E-26 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 SUPERFAMILY SSF56059 488 706 1.02E-22 T 11-11-2016 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 Pfam PF13549 ATP-grasp domain 482 700 3.5E-60 T 11-11-2016 S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 SUPERFAMILY SSF55729 731 877 1.34E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS05380 f56af35e045a2d876e15b53559d74a3c 892 Gene3D G3DSA:3.40.630.30 727 887 2.1E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS00150 687003b167f953bb3b1a941f481654e9 176 Gene3D G3DSA:2.160.10.10 3 174 1.4E-41 T 11-11-2016 S40542_RS00150 687003b167f953bb3b1a941f481654e9 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 94 127 4.7E-6 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS00150 687003b167f953bb3b1a941f481654e9 176 SUPERFAMILY SSF51161 3 174 4.99E-43 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 387 8.2E-122 T 11-11-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 1.0E-21 T 11-11-2016 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.0E-21 T 11-11-2016 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 1.0E-21 T 11-11-2016 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 1.0E-21 T 11-11-2016 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 Pfam PF01494 FAD binding domain 4 342 5.4E-35 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 Gene3D G3DSA:3.50.50.60 3 181 2.3E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 Gene3D G3DSA:3.50.50.60 268 353 2.3E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 SUPERFAMILY SSF51905 4 176 2.59E-59 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS02560 f5b1afc444db80f66a22707c3f8f9415 388 SUPERFAMILY SSF51905 267 382 2.59E-59 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS09870 2c8e44030555fe49ff40d610852d0500 162 Pfam PF01514 Secretory protein of YscJ/FliF family 14 99 1.8E-8 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 Gene3D G3DSA:3.40.50.150 433 702 9.1E-74 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 SMART SM00981 56 154 2.5E-12 T 11-11-2016 IPR004114 THUMP domain GO:0003723 S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 Pfam PF02926 THUMP domain 31 153 8.2E-11 T 11-11-2016 IPR004114 THUMP domain GO:0003723 S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 PIRSF PIRSF037618 1 703 9.9E-272 T 11-11-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 SUPERFAMILY SSF53335 396 702 1.99E-71 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 Pfam PF01170 Putative RNA methylase family UPF0020 162 369 3.2E-49 T 11-11-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 Gene3D G3DSA:3.40.50.150 149 216 2.5E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 Gene3D G3DSA:3.40.50.150 252 371 2.5E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 SUPERFAMILY SSF53335 255 373 2.6E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 SUPERFAMILY SSF53335 141 219 2.6E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 492 658 8.5E-29 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 S40542_RS11565 50e7067071c8ed2d5eb7d7e04895d2e4 703 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 703 28.721 T 11-11-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS07260 389d2f1df8be3c1dc7030ce3a76dd3c2 514 Gene3D G3DSA:3.40.50.1820 136 235 7.2E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS07260 389d2f1df8be3c1dc7030ce3a76dd3c2 514 SUPERFAMILY SSF53474 128 254 3.32E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS20775 1b8c648acda0e1d0e7f27cce78226252 152 SUPERFAMILY SSF52833 21 149 2.96E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS20775 1b8c648acda0e1d0e7f27cce78226252 152 Gene3D G3DSA:3.40.30.10 22 148 3.5E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS20775 1b8c648acda0e1d0e7f27cce78226252 152 Pfam PF00578 AhpC/TSA family 36 128 3.7E-14 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS14705 af84bdfda8b476aae342cf8b99ebb772 168 Pfam PF01863 Protein of unknown function DUF45 87 154 1.3E-10 T 11-11-2016 IPR002725 Protein of unknown function DUF45 S40542_RS17885 f87370d5d70cd253009b21519fba3e05 295 Gene3D G3DSA:1.10.600.10 4 294 1.8E-92 T 11-11-2016 IPR008949 Isoprenoid synthase domain S40542_RS17885 f87370d5d70cd253009b21519fba3e05 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 S40542_RS17885 f87370d5d70cd253009b21519fba3e05 295 SUPERFAMILY SSF48576 3 288 2.88E-85 T 11-11-2016 IPR008949 Isoprenoid synthase domain S40542_RS17885 f87370d5d70cd253009b21519fba3e05 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 S40542_RS17885 f87370d5d70cd253009b21519fba3e05 295 Pfam PF00348 Polyprenyl synthetase 33 271 1.7E-59 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 S40542_RS15410 d4cb1149b3fe781821eda471dbd10a9c 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.9E-40 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 S40542_RS15410 d4cb1149b3fe781821eda471dbd10a9c 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.9E-40 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 S40542_RS15410 d4cb1149b3fe781821eda471dbd10a9c 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.9E-40 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 S40542_RS15410 d4cb1149b3fe781821eda471dbd10a9c 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.9E-40 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 S40542_RS15410 d4cb1149b3fe781821eda471dbd10a9c 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 4.6E-26 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 S40542_RS15410 d4cb1149b3fe781821eda471dbd10a9c 112 Pfam PF03840 Preprotein translocase SecG subunit 4 72 3.6E-22 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 S40542_RS09610 6b75c9c62190face165a158a46fc1781 144 Pfam PF13671 AAA domain 6 138 2.3E-13 T 11-11-2016 S40542_RS09610 6b75c9c62190face165a158a46fc1781 144 Gene3D G3DSA:3.40.50.300 1 143 2.1E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09610 6b75c9c62190face165a158a46fc1781 144 SUPERFAMILY SSF52540 3 138 7.02E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 Gene3D G3DSA:3.30.70.20 119 174 6.1E-17 T 11-11-2016 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 3 182 43.18 T 11-11-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 SUPERFAMILY SSF54862 36 173 1.09E-30 T 11-11-2016 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 Gene3D G3DSA:3.30.70.20 47 67 7.2E-5 T 11-11-2016 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 Gene3D G3DSA:3.30.70.20 105 118 7.2E-5 T 11-11-2016 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 Pfam PF14697 4Fe-4S dicluster domain 107 161 4.6E-18 T 11-11-2016 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 181 4.0E-85 T 11-11-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 PIRSF PIRSF005784 2 184 3.0E-86 T 11-11-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 Pfam PF04060 Putative Fe-S cluster 43 74 2.2E-14 T 11-11-2016 IPR007202 4Fe-4S domain GO:0051536 S40542_RS17375 27ef53be33bd85aac1fc6b138f8f0ef8 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS02960 dedd8ff8fc1f30da261477fe67431768 375 Gene3D G3DSA:3.40.50.720 6 161 4.6E-19 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS02960 dedd8ff8fc1f30da261477fe67431768 375 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 7 110 1.2E-13 T 11-11-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 S40542_RS02960 dedd8ff8fc1f30da261477fe67431768 375 SUPERFAMILY SSF51735 6 149 2.25E-13 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14920 41468631fd2bc2e7177898e1b51d022f 174 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 163 1.6E-22 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 S40542_RS06680 3f7f353b385887790ac4ec14eff5d160 384 SUPERFAMILY SSF53756 331 361 9.77E-27 T 11-11-2016 S40542_RS06680 3f7f353b385887790ac4ec14eff5d160 384 SUPERFAMILY SSF53756 9 300 9.77E-27 T 11-11-2016 S40542_RS06680 3f7f353b385887790ac4ec14eff5d160 384 Gene3D G3DSA:3.40.50.2000 162 348 1.2E-6 T 11-11-2016 S40542_RS06680 3f7f353b385887790ac4ec14eff5d160 384 Pfam PF02684 Lipid-A-disaccharide synthetase 11 375 1.1E-122 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 S40542_RS06680 3f7f353b385887790ac4ec14eff5d160 384 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 41.085 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 S40542_RS06680 3f7f353b385887790ac4ec14eff5d160 384 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 379 1.3E-135 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 S40542_RS05670 d1cd3f7f27068a00bef58ecdf9c3191e 152 Pfam PF07295 Zinc-ribbon containing domain 18 148 2.8E-29 T 11-11-2016 IPR009912 Zinc-ribbon containing domain S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.3E-40 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-11-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 5.2E-36 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 5.2E-36 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 5.2E-36 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 8.0E-15 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 SUPERFAMILY SSF110324 2 82 5.58E-33 T 11-11-2016 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.449 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.1E-37 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 S40542_RS03300 61d00baab9df090f53e3267f45c813e8 85 Gene3D G3DSA:2.40.50.100 20 83 6.5E-30 T 11-11-2016 S40542_RS06450 6a477079430ce89005e452e98e4d1005 286 Gene3D G3DSA:3.40.50.300 23 262 1.9E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS06450 6a477079430ce89005e452e98e4d1005 286 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 26 211 1.4E-24 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain S40542_RS06450 6a477079430ce89005e452e98e4d1005 286 PIRSF PIRSF003092 6 285 1.1E-82 T 11-11-2016 IPR025501 ATP binding protein MinD S40542_RS06450 6a477079430ce89005e452e98e4d1005 286 SUPERFAMILY SSF52540 24 282 5.02E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05050 818dbbdd3cb396305c6f0495460f64fb 177 Gene3D G3DSA:3.40.50.300 6 176 5.3E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05050 818dbbdd3cb396305c6f0495460f64fb 177 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 7 175 2.7E-53 T 11-11-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS05050 818dbbdd3cb396305c6f0495460f64fb 177 SUPERFAMILY SSF52540 6 176 1.88E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05050 818dbbdd3cb396305c6f0495460f64fb 177 PIRSF PIRSF006135 4 177 7.4E-50 T 11-11-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS12765 14a9920cb64426a92cf3c9a606a1d7b2 507 Pfam PF00144 Beta-lactamase 26 351 7.2E-62 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS12765 14a9920cb64426a92cf3c9a606a1d7b2 507 Pfam PF11954 Domain of unknown function (DUF3471) 400 504 6.6E-28 T 11-11-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal S40542_RS12765 14a9920cb64426a92cf3c9a606a1d7b2 507 Gene3D G3DSA:3.40.710.10 24 364 2.0E-76 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS12765 14a9920cb64426a92cf3c9a606a1d7b2 507 SUPERFAMILY SSF56601 24 367 1.76E-77 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS13960 a846c3057dd8ec9648cf197f9c4d67bb 365 SUPERFAMILY SSF48371 180 337 1.04E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 S40542_RS13960 a846c3057dd8ec9648cf197f9c4d67bb 365 Pfam PF13646 HEAT repeats 246 333 1.6E-7 T 11-11-2016 S40542_RS13960 a846c3057dd8ec9648cf197f9c4d67bb 365 Gene3D G3DSA:1.25.10.10 134 337 1.3E-5 T 11-11-2016 IPR011989 Armadillo-like helical S40542_RS04610 467d8fc2bf4c6f27ee2da97cb19fd00b 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 3.0E-80 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 S40542_RS04610 467d8fc2bf4c6f27ee2da97cb19fd00b 308 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 307 3.6E-119 T 11-11-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 S40542_RS04610 467d8fc2bf4c6f27ee2da97cb19fd00b 308 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 307 46.308 T 11-11-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 S40542_RS04610 467d8fc2bf4c6f27ee2da97cb19fd00b 308 PIRSF PIRSF026649 2 306 7.2E-91 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 S40542_RS04125 374ad880bc3cf87b97945800203b05bb 618 Gene3D G3DSA:3.40.50.720 399 502 5.9E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04125 374ad880bc3cf87b97945800203b05bb 618 Pfam PF02254 TrkA-N domain 400 502 2.0E-6 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 S40542_RS04125 374ad880bc3cf87b97945800203b05bb 618 Pfam PF00999 Sodium/hydrogen exchanger family 8 387 4.4E-35 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 S40542_RS04125 374ad880bc3cf87b97945800203b05bb 618 SUPERFAMILY SSF51735 399 500 1.64E-6 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS20735 654286fa9efe77c7e2e2cd5132692278 314 SUPERFAMILY SSF110849 56 190 1.2E-33 T 11-11-2016 IPR003115 ParB/Sulfiredoxin S40542_RS20735 654286fa9efe77c7e2e2cd5132692278 314 SMART SM00470 55 145 2.8E-34 T 11-11-2016 IPR003115 ParB/Sulfiredoxin S40542_RS20735 654286fa9efe77c7e2e2cd5132692278 314 Gene3D G3DSA:3.90.1530.10 46 151 1.0E-41 T 11-11-2016 S40542_RS20735 654286fa9efe77c7e2e2cd5132692278 314 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 51 226 1.6E-57 T 11-11-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 S40542_RS20735 654286fa9efe77c7e2e2cd5132692278 314 Pfam PF02195 ParB-like nuclease domain 57 145 4.9E-28 T 11-11-2016 IPR003115 ParB/Sulfiredoxin S40542_RS14675 e10a7915348ddc20db8c22c7424cdee6 234 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 3.7E-90 T 11-11-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 S40542_RS14675 e10a7915348ddc20db8c22c7424cdee6 234 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 1.6E-41 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 S40542_RS18815 1336683e2fea49cc328af95184a79d72 395 Gene3D G3DSA:3.40.640.10 46 312 2.7E-77 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS18815 1336683e2fea49cc328af95184a79d72 395 SUPERFAMILY SSF53383 1 391 6.2E-95 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS18815 1336683e2fea49cc328af95184a79d72 395 Pfam PF00155 Aminotransferase class I and II 27 388 1.6E-65 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS18815 1336683e2fea49cc328af95184a79d72 395 PRINTS PR00799 Aspartate aminotransferase signature 203 215 1.3E-29 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 S40542_RS18815 1336683e2fea49cc328af95184a79d72 395 PRINTS PR00799 Aspartate aminotransferase signature 337 355 1.3E-29 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 S40542_RS18815 1336683e2fea49cc328af95184a79d72 395 PRINTS PR00799 Aspartate aminotransferase signature 172 191 1.3E-29 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 S40542_RS18815 1336683e2fea49cc328af95184a79d72 395 PRINTS PR00799 Aspartate aminotransferase signature 270 295 1.3E-29 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 S40542_RS06425 85672eba0ddaaf5f42a06631530b8d9c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.4E-16 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 S40542_RS06425 85672eba0ddaaf5f42a06631530b8d9c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.4E-16 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 S40542_RS06425 85672eba0ddaaf5f42a06631530b8d9c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.4E-16 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 S40542_RS06425 85672eba0ddaaf5f42a06631530b8d9c 89 PIRSF PIRSF004669 1 89 1.9E-28 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 S40542_RS06425 85672eba0ddaaf5f42a06631530b8d9c 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.6E-29 T 11-11-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 S40542_RS06425 85672eba0ddaaf5f42a06631530b8d9c 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.6E-27 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 S40542_RS10740 fb1f2b44ec6fc1930f622e0547c8000c 166 Pfam PF06210 Protein of unknown function (DUF1003) 64 162 1.3E-36 T 11-11-2016 IPR010406 Protein of unknown function DUF1003 S40542_RS06725 cba7f93293098c20a8a66fe8cea8e79a 306 Pfam PF11219 Protein of unknown function (DUF3014) 147 300 8.8E-50 T 11-11-2016 IPR021382 Protein of unknown function DUF3014 S40542_RS02240 9aeb00509f54f0e9b60fdda646dc7513 449 Pfam PF12704 MacB-like periplasmic core domain 19 202 3.6E-13 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS02240 9aeb00509f54f0e9b60fdda646dc7513 449 Pfam PF02687 FtsX-like permease family 322 439 2.5E-15 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 Gene3D G3DSA:4.10.520.10 2 92 6.8E-37 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 SMART SM00411 3 92 3.5E-43 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.126 T 11-11-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.4E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.4E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.4E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.9E-33 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 SUPERFAMILY SSF47729 3 92 3.09E-32 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 S40542_RS07045 39626a2a746334c6c33891e22a211a24 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 9.2E-51 T 11-11-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 S40542_RS16215 6630f5832111f10f61333051bacad84c 299 SUPERFAMILY SSF103481 183 287 1.57E-10 T 11-11-2016 S40542_RS16215 6630f5832111f10f61333051bacad84c 299 Pfam PF00892 EamA-like transporter family 147 281 8.0E-18 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS16215 6630f5832111f10f61333051bacad84c 299 Pfam PF00892 EamA-like transporter family 9 134 4.3E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS16215 6630f5832111f10f61333051bacad84c 299 SUPERFAMILY SSF103481 36 137 1.44E-9 T 11-11-2016 S40542_RS13295 66769b5c00097c8f169f420839463733 217 Gene3D G3DSA:3.90.950.10 6 196 5.5E-55 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS13295 66769b5c00097c8f169f420839463733 217 Pfam PF01725 Ham1 family 10 194 7.1E-40 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 S40542_RS13295 66769b5c00097c8f169f420839463733 217 SUPERFAMILY SSF52972 7 196 2.2E-52 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like S40542_RS09240 eaf446ffa565b441fdca1e3f86825176 199 SUPERFAMILY SSF53335 27 174 9.19E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09240 eaf446ffa565b441fdca1e3f86825176 199 Pfam PF13649 Methyltransferase domain 42 137 9.2E-12 T 11-11-2016 S40542_RS09240 eaf446ffa565b441fdca1e3f86825176 199 Gene3D G3DSA:3.40.50.150 26 182 3.4E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS05135 0808981b5c51a45459c943eee7932efb 576 SUPERFAMILY SSF64182 46 464 1.09E-117 T 11-11-2016 S40542_RS05135 0808981b5c51a45459c943eee7932efb 576 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 570 3.0E-159 T 11-11-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 S40542_RS05135 0808981b5c51a45459c943eee7932efb 576 Pfam PF01368 DHH family 71 212 1.6E-10 T 11-11-2016 IPR001667 DDH domain S40542_RS05135 0808981b5c51a45459c943eee7932efb 576 Pfam PF02272 DHHA1 domain 380 448 3.5E-15 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 S40542_RS17985 a9d90a5b54a8e7e5ac2f462e91f88ac7 328 Pfam PF02687 FtsX-like permease family 201 321 2.2E-10 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS17985 a9d90a5b54a8e7e5ac2f462e91f88ac7 328 PIRSF PIRSF003097 26 322 3.8E-73 T 11-11-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 S40542_RS04350 922ed13db1c1b7a108b0aa0244cffe00 521 SUPERFAMILY SSF52540 248 360 4.59E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04350 922ed13db1c1b7a108b0aa0244cffe00 521 SUPERFAMILY SSF52540 119 196 4.59E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04350 922ed13db1c1b7a108b0aa0244cffe00 521 SUPERFAMILY SSF52540 2 167 2.52E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04350 922ed13db1c1b7a108b0aa0244cffe00 521 Pfam PF00271 Helicase conserved C-terminal domain 263 358 2.1E-6 T 11-11-2016 IPR001650 Helicase, C-terminal S40542_RS04350 922ed13db1c1b7a108b0aa0244cffe00 521 SMART SM00487 2 191 0.0095 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain S40542_RS04350 922ed13db1c1b7a108b0aa0244cffe00 521 Gene3D G3DSA:3.40.50.300 261 373 9.4E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04350 922ed13db1c1b7a108b0aa0244cffe00 521 Gene3D G3DSA:3.40.50.300 2 167 2.4E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04350 922ed13db1c1b7a108b0aa0244cffe00 521 Pfam PF04851 Type III restriction enzyme, res subunit 1 161 2.5E-10 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 S40542_RS09200 4885d9e3ce806fc7b6379408f1f043bb 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 3 45 5.3E-11 T 11-11-2016 IPR008621 Cbb3-type cytochrome oxidase component S40542_RS08305 b2d7fb1c49a4de2727b670135c45381b 87 Pfam PF01381 Helix-turn-helix 7 58 1.4E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS08305 b2d7fb1c49a4de2727b670135c45381b 87 SUPERFAMILY SSF47413 4 60 2.95E-11 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS08305 b2d7fb1c49a4de2727b670135c45381b 87 Gene3D G3DSA:1.10.260.40 4 64 7.9E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS08305 b2d7fb1c49a4de2727b670135c45381b 87 SMART SM00530 6 61 3.0E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 5.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 5.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 5.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 5.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 SUPERFAMILY SSF55874 382 533 9.04E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 47 142 1.2E-6 T 11-11-2016 IPR033414 Periplasmic sensor domain S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 Pfam PF00672 HAMP domain 159 219 5.5E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 SMART SM00387 423 535 3.9E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 Gene3D G3DSA:3.30.565.10 383 533 4.8E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS02625 f3f1b636de640d0e1f2d1ff0c35aadc0 547 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 532 3.4E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS11495 e24001935594b22fa543a5015b8568ad 184 Pfam PF13590 Domain of unknown function (DUF4136) 24 180 4.3E-33 T 11-11-2016 IPR025411 Domain of unknown function DUF4136 S40542_RS09255 6edbbbdc26bc4d0f7843b5627d660747 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 278 3.5E-112 T 11-11-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 S40542_RS09255 6edbbbdc26bc4d0f7843b5627d660747 281 SUPERFAMILY SSF53474 1 280 1.07E-86 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS09255 6edbbbdc26bc4d0f7843b5627d660747 281 Pfam PF00756 Putative esterase 24 272 2.8E-56 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS09255 6edbbbdc26bc4d0f7843b5627d660747 281 Gene3D G3DSA:3.40.50.1820 1 280 3.5E-72 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS01485 b9340f1e992bb2d12cd831cf3530973e 394 SUPERFAMILY SSF53335 108 194 1.45E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01485 b9340f1e992bb2d12cd831cf3530973e 394 Gene3D G3DSA:3.40.50.150 116 179 2.2E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS01485 b9340f1e992bb2d12cd831cf3530973e 394 Pfam PF13679 Methyltransferase domain 102 224 1.4E-14 T 11-11-2016 IPR025714 Methyltransferase domain S40542_RS19040 a59d3154ebfc4d5f0861ed37f64d4356 151 Gene3D G3DSA:3.40.930.10 1 150 8.5E-40 T 11-11-2016 IPR002178 PTS EIIA type-2 domain S40542_RS19040 a59d3154ebfc4d5f0861ed37f64d4356 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 1.9E-31 T 11-11-2016 IPR002178 PTS EIIA type-2 domain S40542_RS19040 a59d3154ebfc4d5f0861ed37f64d4356 151 SUPERFAMILY SSF55804 1 147 5.36E-35 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 S40542_RS19040 a59d3154ebfc4d5f0861ed37f64d4356 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 148 2.3E-42 T 11-11-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 S40542_RS19040 a59d3154ebfc4d5f0861ed37f64d4356 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-11-2016 IPR002178 PTS EIIA type-2 domain S40542_RS05655 163f7f33afa86e0161637861184c0999 352 Gene3D G3DSA:1.20.272.20 221 335 3.9E-32 T 11-11-2016 S40542_RS05655 163f7f33afa86e0161637861184c0999 352 SUPERFAMILY SSF52540 1 208 6.9E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05655 163f7f33afa86e0161637861184c0999 352 Pfam PF06144 DNA polymerase III, delta subunit 20 189 2.6E-30 T 11-11-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 S40542_RS05655 163f7f33afa86e0161637861184c0999 352 Gene3D G3DSA:1.10.8.60 145 220 2.0E-20 T 11-11-2016 S40542_RS05655 163f7f33afa86e0161637861184c0999 352 Gene3D G3DSA:3.40.50.300 1 138 2.7E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05655 163f7f33afa86e0161637861184c0999 352 SUPERFAMILY SSF48019 211 332 5.27E-23 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 S40542_RS05655 163f7f33afa86e0161637861184c0999 352 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 218 333 2.0E-13 T 11-11-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS05655 163f7f33afa86e0161637861184c0999 352 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 3.4E-67 T 11-11-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 S40542_RS15235 cb6fdc9b9078a7fd320b34edd53e6e87 407 Pfam PF12704 MacB-like periplasmic core domain 25 242 1.7E-11 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS15235 cb6fdc9b9078a7fd320b34edd53e6e87 407 Pfam PF02687 FtsX-like permease family 288 400 3.4E-18 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS15975 9725d2552ed95ac5b808ce1258c914aa 127 SUPERFAMILY SSF52172 4 121 2.99E-32 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15975 9725d2552ed95ac5b808ce1258c914aa 127 Pfam PF00072 Response regulator receiver domain 7 117 8.5E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15975 9725d2552ed95ac5b808ce1258c914aa 127 SMART SM00448 5 117 1.1E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15975 9725d2552ed95ac5b808ce1258c914aa 127 Gene3D G3DSA:3.40.50.2300 4 120 3.5E-33 T 11-11-2016 S40542_RS13250 a596fe2896e735572f47e0024b38e6db 170 Pfam PF01551 Peptidase family M23 52 139 1.8E-20 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS13250 a596fe2896e735572f47e0024b38e6db 170 Gene3D G3DSA:2.70.70.10 23 168 6.0E-28 T 11-11-2016 S40542_RS13250 a596fe2896e735572f47e0024b38e6db 170 SUPERFAMILY SSF51261 25 140 2.04E-25 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS15555 dcf886b40be59ac6a6c751dd63bc7ab9 444 Gene3D G3DSA:1.25.40.20 233 338 1.8E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain S40542_RS15555 dcf886b40be59ac6a6c751dd63bc7ab9 444 SUPERFAMILY SSF48403 233 338 8.82E-13 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain S40542_RS06910 183232c2e7e48b051bc67dfca5ec8606 446 Gene3D G3DSA:3.30.565.10 299 436 1.3E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06910 183232c2e7e48b051bc67dfca5ec8606 446 SUPERFAMILY SSF55874 284 434 3.01E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06910 183232c2e7e48b051bc67dfca5ec8606 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 440 5.0E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06910 183232c2e7e48b051bc67dfca5ec8606 446 SUPERFAMILY SSF47384 219 296 5.69E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS06910 183232c2e7e48b051bc67dfca5ec8606 446 SMART SM00387 339 446 1.1E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06910 183232c2e7e48b051bc67dfca5ec8606 446 Gene3D G3DSA:1.10.287.130 230 291 5.4E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS01405 f4010c9adafe2b290c90cefad1d16c99 229 SUPERFAMILY SSF51366 10 224 4.33E-77 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 S40542_RS01405 f4010c9adafe2b290c90cefad1d16c99 229 PIRSF PIRSF001461 6 229 4.1E-105 T 11-11-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 S40542_RS01405 f4010c9adafe2b290c90cefad1d16c99 229 Gene3D G3DSA:3.20.20.70 5 223 9.9E-95 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS01405 f4010c9adafe2b290c90cefad1d16c99 229 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 11 222 5.5E-98 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 S40542_RS01405 f4010c9adafe2b290c90cefad1d16c99 229 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 39 53 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 S40542_RS01405 f4010c9adafe2b290c90cefad1d16c99 229 Pfam PF00834 Ribulose-phosphate 3 epimerase family 12 209 1.1E-89 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 S40542_RS01405 f4010c9adafe2b290c90cefad1d16c99 229 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 142 164 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 426 3.6E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 Gene3D G3DSA:3.30.450.20 96 169 1.4E-7 T 11-11-2016 S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 SUPERFAMILY SSF47384 214 287 2.94E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.9E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.9E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 SUPERFAMILY SSF55785 96 169 9.21E-7 T 11-11-2016 IPR000014 PAS domain S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 SMART SM00387 321 427 2.2E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 SUPERFAMILY SSF55874 316 425 3.8E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15245 952cf8ff61f90cfa931f34cbbad19713 429 Gene3D G3DSA:3.30.565.10 315 426 1.7E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08595 defe024d2fd0cbdbe99e1ca4d51706a6 165 Gene3D G3DSA:3.10.450.50 40 147 3.9E-6 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS08595 defe024d2fd0cbdbe99e1ca4d51706a6 165 SUPERFAMILY SSF54427 40 148 4.6E-7 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS09290 7da033b02b8db35535beb2f7706efa70 541 Gene3D G3DSA:3.20.20.450 277 530 6.0E-73 T 11-11-2016 IPR001633 EAL domain S40542_RS09290 7da033b02b8db35535beb2f7706efa70 541 SUPERFAMILY SSF141868 283 531 2.88E-72 T 11-11-2016 IPR001633 EAL domain S40542_RS09290 7da033b02b8db35535beb2f7706efa70 541 SMART SM00052 273 524 4.4E-72 T 11-11-2016 IPR001633 EAL domain S40542_RS09290 7da033b02b8db35535beb2f7706efa70 541 SUPERFAMILY SSF55073 123 250 5.41E-6 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS09290 7da033b02b8db35535beb2f7706efa70 541 Pfam PF00563 EAL domain 280 519 1.8E-60 T 11-11-2016 IPR001633 EAL domain S40542_RS17610 1c38f644c99dcd83702b101bcc763224 1301 Pfam PF04830 Possible hemagglutinin (DUF637) 701 878 1.8E-16 T 11-11-2016 IPR006915 Domain of unknown function DUF637, haemagglutinin putative S40542_RS03510 2d6c039e3f50ab3e518d51d23c600078 205 Pfam PF02441 Flavoprotein 8 148 2.7E-23 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 S40542_RS03510 2d6c039e3f50ab3e518d51d23c600078 205 Gene3D G3DSA:3.40.50.1950 7 202 2.9E-72 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 S40542_RS03510 2d6c039e3f50ab3e518d51d23c600078 205 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.474 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 S40542_RS03510 2d6c039e3f50ab3e518d51d23c600078 205 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 2.8E-56 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 S40542_RS03510 2d6c039e3f50ab3e518d51d23c600078 205 SUPERFAMILY SSF52507 8 202 8.9E-58 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 S40542_RS06685 d1f41bfd32812c49b4442e0fe230810e 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 10 189 38.469 T 11-11-2016 IPR022898 Ribonuclease HII GO:0004523 S40542_RS06685 d1f41bfd32812c49b4442e0fe230810e 197 SUPERFAMILY SSF53098 5 194 2.58E-69 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS06685 d1f41bfd32812c49b4442e0fe230810e 197 Gene3D G3DSA:3.30.420.10 10 150 6.5E-47 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS06685 d1f41bfd32812c49b4442e0fe230810e 197 Pfam PF01351 Ribonuclease HII 12 188 3.2E-41 T 11-11-2016 IPR024567 Ribonuclease HII/HIII domain S40542_RS18305 ba4db5d39146d0dce621d259fea796e9 618 Gene3D G3DSA:2.40.170.20 152 618 5.4E-80 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS18305 ba4db5d39146d0dce621d259fea796e9 618 SUPERFAMILY SSF56935 26 618 2.36E-110 T 11-11-2016 S40542_RS18305 ba4db5d39146d0dce621d259fea796e9 618 Gene3D G3DSA:2.170.130.10 20 151 2.5E-37 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS18305 ba4db5d39146d0dce621d259fea796e9 618 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 145 5.5E-25 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS18305 ba4db5d39146d0dce621d259fea796e9 618 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 601 618 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site S40542_RS18305 ba4db5d39146d0dce621d259fea796e9 618 Pfam PF00593 TonB dependent receptor 377 617 1.7E-33 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS10670 7cfa19f53d2839bc4488e07e6a28df82 402 SUPERFAMILY SSF56349 47 104 3.53E-22 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS10670 7cfa19f53d2839bc4488e07e6a28df82 402 SUPERFAMILY SSF56349 139 392 3.53E-22 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS10670 7cfa19f53d2839bc4488e07e6a28df82 402 Pfam PF00589 Phage integrase family 253 389 2.7E-10 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS10670 7cfa19f53d2839bc4488e07e6a28df82 402 Gene3D G3DSA:1.10.150.130 51 105 2.4E-5 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal S40542_RS10670 7cfa19f53d2839bc4488e07e6a28df82 402 Gene3D G3DSA:1.10.150.130 140 170 2.4E-5 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal S40542_RS10670 7cfa19f53d2839bc4488e07e6a28df82 402 Gene3D G3DSA:1.10.443.10 209 394 3.9E-19 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS04260 f87855f32db05b582bcd59f17da82aa7 273 Gene3D G3DSA:3.90.1200.10 137 229 3.8E-15 T 11-11-2016 S40542_RS04260 f87855f32db05b582bcd59f17da82aa7 273 SUPERFAMILY SSF56112 17 215 6.81E-23 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS04260 f87855f32db05b582bcd59f17da82aa7 273 Pfam PF01633 Choline/ethanolamine kinase 124 204 4.3E-15 T 11-11-2016 S40542_RS19745 8235491144ef2da9c74b6d666ed169b0 401 Gene3D G3DSA:3.60.120.10 71 394 1.7E-83 T 11-11-2016 IPR005801 ADC synthase GO:0009058 S40542_RS19745 8235491144ef2da9c74b6d666ed169b0 401 Pfam PF00425 chorismate binding enzyme 127 382 3.0E-71 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal S40542_RS19745 8235491144ef2da9c74b6d666ed169b0 401 SUPERFAMILY SSF56322 43 391 2.09E-86 T 11-11-2016 IPR005801 ADC synthase GO:0009058 S40542_RS19745 8235491144ef2da9c74b6d666ed169b0 401 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 104 390 5.5E-86 T 11-11-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 S40542_RS11385 f3ce94241a11b29435cb38a95d8fc5ac 153 Pfam PF11215 Protein of unknown function (DUF3010) 1 137 1.2E-50 T 11-11-2016 IPR021378 Protein of unknown function DUF3010 S40542_RS05215 388f82e826305d3d252852f7593f2ee9 190 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 111 188 6.0E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS05215 388f82e826305d3d252852f7593f2ee9 190 SUPERFAMILY SSF74653 103 178 7.85E-25 T 11-11-2016 S40542_RS05215 388f82e826305d3d252852f7593f2ee9 190 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 110 187 2.2E-20 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS05215 388f82e826305d3d252852f7593f2ee9 190 Gene3D G3DSA:3.30.1150.10 108 189 1.5E-11 T 11-11-2016 S40542_RS05215 388f82e826305d3d252852f7593f2ee9 190 PRINTS PR01374 Gram-negative bacterial tonB protein signature 145 162 3.2E-6 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 S40542_RS05215 388f82e826305d3d252852f7593f2ee9 190 PRINTS PR01374 Gram-negative bacterial tonB protein signature 50 60 3.2E-6 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 S40542_RS05215 388f82e826305d3d252852f7593f2ee9 190 PRINTS PR01374 Gram-negative bacterial tonB protein signature 126 144 3.2E-6 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 S40542_RS18900 abbef079b19eb8d863d2313588d21795 150 SUPERFAMILY SSF101738 1 114 6.54E-48 T 11-11-2016 IPR007481 Stringent starvation protein B S40542_RS18900 abbef079b19eb8d863d2313588d21795 150 Gene3D G3DSA:2.30.30.220 1 105 1.8E-50 T 11-11-2016 IPR007481 Stringent starvation protein B S40542_RS18900 abbef079b19eb8d863d2313588d21795 150 Pfam PF04386 Stringent starvation protein B 3 150 2.2E-40 T 11-11-2016 IPR007481 Stringent starvation protein B S40542_RS18900 abbef079b19eb8d863d2313588d21795 150 PIRSF PIRSF005276 1 150 1.3E-56 T 11-11-2016 IPR007481 Stringent starvation protein B S40542_RS03960 ded37e188098b20082651d8a994d2280 140 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 11 137 1.3E-34 T 11-11-2016 IPR018893 Type VIII secretion system, CsgF S40542_RS02275 7edfa1a7f7a53a63ab6327c124e4ca39 346 Gene3D G3DSA:3.40.50.2300 34 154 4.8E-15 T 11-11-2016 S40542_RS02275 7edfa1a7f7a53a63ab6327c124e4ca39 346 Gene3D G3DSA:3.40.50.2300 155 301 4.6E-25 T 11-11-2016 S40542_RS02275 7edfa1a7f7a53a63ab6327c124e4ca39 346 Pfam PF13407 Periplasmic binding protein domain 35 288 8.0E-27 T 11-11-2016 IPR025997 Periplasmic binding protein S40542_RS02275 7edfa1a7f7a53a63ab6327c124e4ca39 346 SUPERFAMILY SSF53822 29 310 1.1E-37 T 11-11-2016 IPR028082 Periplasmic binding protein-like I S40542_RS06430 ff983152139171ae5997bc6fb5840489 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.1E-15 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 S40542_RS06430 ff983152139171ae5997bc6fb5840489 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.1E-15 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 S40542_RS06430 ff983152139171ae5997bc6fb5840489 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.1E-15 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 S40542_RS06430 ff983152139171ae5997bc6fb5840489 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.1E-15 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 S40542_RS06430 ff983152139171ae5997bc6fb5840489 259 Pfam PF01311 Bacterial export proteins, family 1 14 244 8.6E-61 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 S40542_RS06430 ff983152139171ae5997bc6fb5840489 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 255 2.1E-66 T 11-11-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 S40542_RS15650 e4fc58e541a898ecdfb7b6abfe99ca75 302 SUPERFAMILY SSF101790 217 300 3.73E-14 T 11-11-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain S40542_RS15650 e4fc58e541a898ecdfb7b6abfe99ca75 302 Gene3D G3DSA:3.30.70.1400 10 93 1.1E-23 T 11-11-2016 S40542_RS15650 e4fc58e541a898ecdfb7b6abfe99ca75 302 SUPERFAMILY SSF103025 9 216 6.44E-43 T 11-11-2016 S40542_RS15650 e4fc58e541a898ecdfb7b6abfe99ca75 302 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 161 225 7.7E-25 T 11-11-2016 IPR017703 YgfZ/GcvT conserved site S40542_RS03170 9c073f6c919c616446960f59ac75833e 201 Pfam PF01121 Dephospho-CoA kinase 4 180 1.5E-64 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 S40542_RS03170 9c073f6c919c616446960f59ac75833e 201 Gene3D G3DSA:3.40.50.300 4 195 1.7E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03170 9c073f6c919c616446960f59ac75833e 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 187 8.8E-58 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 S40542_RS03170 9c073f6c919c616446960f59ac75833e 201 SUPERFAMILY SSF52540 1 191 7.85E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03170 9c073f6c919c616446960f59ac75833e 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 193 26.688 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 S40542_RS14410 f16b5565a06a8201e9f01ab07d764615 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 2.9E-36 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS14410 f16b5565a06a8201e9f01ab07d764615 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.766 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS14410 f16b5565a06a8201e9f01ab07d764615 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site S40542_RS14410 f16b5565a06a8201e9f01ab07d764615 78 SUPERFAMILY SSF47336 1 76 1.18E-23 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS14410 f16b5565a06a8201e9f01ab07d764615 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.6E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS14410 f16b5565a06a8201e9f01ab07d764615 78 Gene3D G3DSA:1.10.1200.10 3 76 4.6E-35 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS14410 f16b5565a06a8201e9f01ab07d764615 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.004 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS16820 d73458cfa31f78227694d400fff55b74 468 PIRSF PIRSF019381 4 468 4.6E-150 T 11-11-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein S40542_RS16820 d73458cfa31f78227694d400fff55b74 468 Pfam PF04317 YcjX-like family, DUF463 30 467 9.1E-151 T 11-11-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein S40542_RS16820 d73458cfa31f78227694d400fff55b74 468 SUPERFAMILY SSF52540 11 156 1.83E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16820 d73458cfa31f78227694d400fff55b74 468 Gene3D G3DSA:3.40.50.300 276 364 1.4E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16820 d73458cfa31f78227694d400fff55b74 468 Gene3D G3DSA:3.40.50.300 13 66 1.4E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15520 783823c3a1034b4fd9ea418a8439cd22 235 Gene3D G3DSA:1.10.10.10 131 233 7.7E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS15520 783823c3a1034b4fd9ea418a8439cd22 235 Gene3D G3DSA:3.40.50.2300 3 124 7.0E-6 T 11-11-2016 S40542_RS15520 783823c3a1034b4fd9ea418a8439cd22 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 3.2E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS15520 783823c3a1034b4fd9ea418a8439cd22 235 SUPERFAMILY SSF52172 3 122 1.56E-5 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS15520 783823c3a1034b4fd9ea418a8439cd22 235 SMART SM00862 154 230 7.9E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS15520 783823c3a1034b4fd9ea418a8439cd22 235 SUPERFAMILY SSF46894 128 231 3.97E-26 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS11080 c8b5c69bd879c165a3d3de47ed40e83f 296 Gene3D G3DSA:3.60.110.10 5 292 8.4E-102 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS11080 c8b5c69bd879c165a3d3de47ed40e83f 296 Pfam PF00795 Carbon-nitrogen hydrolase 7 274 5.6E-60 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS11080 c8b5c69bd879c165a3d3de47ed40e83f 296 SUPERFAMILY SSF56317 4 291 1.96E-88 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 S40542_RS12485 bd87d4c2a45fe1d9db16718cd571fe9d 171 Gene3D G3DSA:3.40.50.300 1 100 2.3E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12485 bd87d4c2a45fe1d9db16718cd571fe9d 171 SUPERFAMILY SSF52540 2 102 4.95E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS01360 ee4f18744fd4a47f88a33ffd273703ea 201 Pfam PF04350 Pilus assembly protein, PilO 59 196 7.0E-50 T 11-11-2016 IPR007445 Pilus assembly protein, PilO S40542_RS01360 ee4f18744fd4a47f88a33ffd273703ea 201 Gene3D G3DSA:1.10.287.540 64 99 1.2E-12 T 11-11-2016 IPR023218 UPF0291 structural domain S40542_RS01360 ee4f18744fd4a47f88a33ffd273703ea 201 Gene3D G3DSA:3.30.70.60 101 199 1.5E-33 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 S40542_RS01360 ee4f18744fd4a47f88a33ffd273703ea 201 PIRSF PIRSF016482 6 201 9.5E-60 T 11-11-2016 IPR007445 Pilus assembly protein, PilO S40542_RS16415 b54e622b6920a9f805fb3a4305d93d65 387 Pfam PF04984 Phage tail sheath protein 1 93 3.4E-13 T 11-11-2016 IPR007067 Tail sheath protein S40542_RS16415 b54e622b6920a9f805fb3a4305d93d65 387 Pfam PF04984 Phage tail sheath protein 96 375 3.3E-47 T 11-11-2016 IPR007067 Tail sheath protein S40542_RS13805 8c2c3c80634e309f7fd69005f924d764 539 Gene3D G3DSA:1.10.275.10 14 218 3.7E-59 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal S40542_RS13805 8c2c3c80634e309f7fd69005f924d764 539 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 160 176 - T 11-11-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 S40542_RS13805 8c2c3c80634e309f7fd69005f924d764 539 SUPERFAMILY SSF48557 29 537 4.79E-148 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 S40542_RS13805 8c2c3c80634e309f7fd69005f924d764 539 Pfam PF00221 Aromatic amino acid lyase 30 500 6.8E-140 T 11-11-2016 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 S40542_RS13805 8c2c3c80634e309f7fd69005f924d764 539 Gene3D G3DSA:1.20.200.10 219 537 6.3E-82 T 11-11-2016 S40542_RS11900 a8c4d257dc506c7d488c10b906c4d63e 277 Gene3D G3DSA:3.40.50.1110 26 269 1.9E-9 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain S40542_RS11900 a8c4d257dc506c7d488c10b906c4d63e 277 SUPERFAMILY SSF52266 79 269 1.39E-9 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain S40542_RS11900 a8c4d257dc506c7d488c10b906c4d63e 277 SUPERFAMILY SSF52266 28 52 1.39E-9 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 Gene3D G3DSA:2.60.120.260 416 562 3.7E-17 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 SMART SM00939 318 549 0.002 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 SUPERFAMILY SSF49785 412 562 1.85E-9 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 SUPERFAMILY SSF53474 12 354 1.45E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 35 289 7.1E-32 T 11-11-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 Gene3D G3DSA:3.40.50.1820 189 190 3.6E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 Gene3D G3DSA:3.40.50.1820 11 151 3.6E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 Gene3D G3DSA:3.40.50.1820 228 351 3.6E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 337 538 8.0E-14 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 S40542_RS10135 787f54074b1c2c87d035a2a172f5c9d5 570 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 64 562 1.7E-49 T 11-11-2016 IPR005674 CocE/Serine esterase GO:0016787 S40542_RS05475 d599bab6f3fd1b721961f948d11510a0 218 Gene3D G3DSA:2.40.30.20 105 195 1.3E-29 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 S40542_RS05475 d599bab6f3fd1b721961f948d11510a0 218 Gene3D G3DSA:2.40.30.20 5 104 6.7E-30 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 S40542_RS05475 d599bab6f3fd1b721961f948d11510a0 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 1.9E-64 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05475 d599bab6f3fd1b721961f948d11510a0 218 SUPERFAMILY SSF63380 1 89 4.85E-24 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS05475 d599bab6f3fd1b721961f948d11510a0 218 Pfam PF00677 Lumazine binding domain 100 184 1.0E-19 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05475 d599bab6f3fd1b721961f948d11510a0 218 Pfam PF00677 Lumazine binding domain 3 87 4.4E-21 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS05475 d599bab6f3fd1b721961f948d11510a0 218 SUPERFAMILY SSF63380 93 196 3.66E-31 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS05475 d599bab6f3fd1b721961f948d11510a0 218 PIRSF PIRSF000498 1 211 1.8E-76 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 S40542_RS19830 232ec3e085fcae6893aa2f7f698b58af 176 SUPERFAMILY SSF88659 92 169 5.61E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS19830 232ec3e085fcae6893aa2f7f698b58af 176 SUPERFAMILY SSF88946 10 96 1.84E-12 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS19830 232ec3e085fcae6893aa2f7f698b58af 176 Gene3D G3DSA:1.10.10.10 106 169 1.1E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS19830 232ec3e085fcae6893aa2f7f698b58af 176 Pfam PF04542 Sigma-70 region 2 13 80 2.2E-11 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS19830 232ec3e085fcae6893aa2f7f698b58af 176 Gene3D G3DSA:1.10.1740.10 9 100 2.0E-11 T 11-11-2016 S40542_RS19830 232ec3e085fcae6893aa2f7f698b58af 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 168 6.6E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS02305 c35a3963645bb2635d2d0a0369ad1c7d 318 Gene3D G3DSA:3.20.20.220 39 265 9.8E-12 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like S40542_RS02305 c35a3963645bb2635d2d0a0369ad1c7d 318 Pfam PF02219 Methylenetetrahydrofolate reductase 163 256 1.2E-4 T 11-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 S40542_RS02305 c35a3963645bb2635d2d0a0369ad1c7d 318 SUPERFAMILY SSF51730 7 272 7.46E-30 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like S40542_RS12935 cfd87bce468ef1ce0a0aee98a27e977c 276 Pfam PF00756 Putative esterase 41 233 9.1E-19 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS12935 cfd87bce468ef1ce0a0aee98a27e977c 276 Gene3D G3DSA:3.40.50.1820 34 275 4.1E-60 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS12935 cfd87bce468ef1ce0a0aee98a27e977c 276 SUPERFAMILY SSF53474 24 275 1.37E-46 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS01550 029e798afa954e77587cbea80769a62f 192 Pfam PF04220 Der GTPase activator (YihI) 23 165 1.0E-32 T 11-11-2016 IPR007336 Der GTPase activator S40542_RS01550 029e798afa954e77587cbea80769a62f 192 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 178 13.797 T 11-11-2016 IPR007336 Der GTPase activator S40542_RS17555 f2c685e2b6f59f599ecfa76263ee9105 195 SUPERFAMILY SSF54631 37 169 7.43E-10 T 11-11-2016 S40542_RS17555 f2c685e2b6f59f599ecfa76263ee9105 195 Gene3D G3DSA:3.10.580.10 45 167 5.6E-6 T 11-11-2016 S40542_RS13350 4d6088ac2571a284c1ec861263a0ea83 300 Pfam PF13737 Transposase DDE domain 16 127 5.9E-40 T 11-11-2016 IPR025668 Transposase DDE domain S40542_RS04030 9b12d37e326649901ea498b09a78f9fe 129 Gene3D G3DSA:3.10.180.10 1 126 3.4E-17 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS04030 9b12d37e326649901ea498b09a78f9fe 129 SUPERFAMILY SSF54593 2 125 5.24E-15 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS00495 de094e775fdc0c1532f78e9a0f646037 105 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 1 77 1.9E-28 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 S40542_RS00495 de094e775fdc0c1532f78e9a0f646037 105 Gene3D G3DSA:3.90.110.10 26 85 4.5E-4 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 S40542_RS00495 de094e775fdc0c1532f78e9a0f646037 105 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 37 55 8.2E-13 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 S40542_RS00495 de094e775fdc0c1532f78e9a0f646037 105 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 18 37 8.2E-13 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 S40542_RS00495 de094e775fdc0c1532f78e9a0f646037 105 Pfam PF02416 mttA/Hcf106 family 1 38 8.9E-6 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 S40542_RS09545 0a1c2e7864649f3e11ce4dcada23a507 760 Gene3D G3DSA:2.170.130.10 51 180 5.3E-28 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS09545 0a1c2e7864649f3e11ce4dcada23a507 760 Gene3D G3DSA:2.40.170.20 188 760 3.7E-106 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS09545 0a1c2e7864649f3e11ce4dcada23a507 760 SUPERFAMILY SSF56935 38 760 1.19E-106 T 11-11-2016 S40542_RS09545 0a1c2e7864649f3e11ce4dcada23a507 760 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 74 760 4.0E-86 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 S40542_RS09545 0a1c2e7864649f3e11ce4dcada23a507 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 170 2.1E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS09545 0a1c2e7864649f3e11ce4dcada23a507 760 Pfam PF00593 TonB dependent receptor 503 759 3.3E-29 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS11150 19c248480ecb88557456eda2e0d5211f 330 PIRSF PIRSF020419 3 313 8.9E-43 T 11-11-2016 IPR016773 Ferric uptake regulator, CjrA, predicted S40542_RS11150 19c248480ecb88557456eda2e0d5211f 330 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 60 266 8.6E-52 T 11-11-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN S40542_RS11150 19c248480ecb88557456eda2e0d5211f 330 SUPERFAMILY SSF159501 45 298 4.45E-59 T 11-11-2016 S40542_RS11465 fda7c297ba738688ca19a4be5ff6d2e6 176 Gene3D G3DSA:1.20.58.320 2 78 6.2E-28 T 11-11-2016 S40542_RS11465 fda7c297ba738688ca19a4be5ff6d2e6 176 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 173 1.8E-58 T 11-11-2016 IPR010323 Protein of unknown function DUF924 S40542_RS11465 fda7c297ba738688ca19a4be5ff6d2e6 176 SUPERFAMILY SSF48452 2 172 6.07E-62 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS11465 fda7c297ba738688ca19a4be5ff6d2e6 176 Gene3D G3DSA:1.25.40.10 79 176 9.0E-34 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 PIRSF PIRSF000303 1 160 1.1E-66 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 PRINTS PR01011 Glutathione peroxidase family signature 20 37 7.1E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 PRINTS PR01011 Glutathione peroxidase family signature 120 129 7.1E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 PRINTS PR01011 Glutathione peroxidase family signature 55 71 7.1E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 58 65 - T 11-11-2016 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 SUPERFAMILY SSF52833 2 156 2.63E-59 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 Pfam PF00255 Glutathione peroxidase 2 109 2.8E-41 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 Gene3D G3DSA:3.40.30.10 2 157 1.1E-70 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS18400 661ce8d5bd7a03d3506897bcc3450526 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 22 37 - T 11-11-2016 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 S40542_RS19130 8c1724c686736cab5cfa304439b17bdd 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 S40542_RS19130 8c1724c686736cab5cfa304439b17bdd 455 Gene3D G3DSA:1.20.1250.20 12 193 1.1E-33 T 11-11-2016 S40542_RS19130 8c1724c686736cab5cfa304439b17bdd 455 Gene3D G3DSA:1.20.1250.20 210 396 2.6E-25 T 11-11-2016 S40542_RS19130 8c1724c686736cab5cfa304439b17bdd 455 SUPERFAMILY SSF103473 1 395 1.12E-68 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS19130 8c1724c686736cab5cfa304439b17bdd 455 Pfam PF07690 Major Facilitator Superfamily 20 316 6.1E-38 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS04425 d9d868c309d7d6ba6ab37468131b70f2 73 Gene3D G3DSA:2.30.30.320 3 71 7.1E-31 T 11-11-2016 IPR023387 DUF1653-like domain S40542_RS04425 d9d868c309d7d6ba6ab37468131b70f2 73 Pfam PF07866 Protein of unknown function (DUF1653) 8 68 3.8E-29 T 11-11-2016 IPR023387 DUF1653-like domain S40542_RS07320 5a5ed2ca4e46e391b2d1c52d60e6f89c 193 SUPERFAMILY SSF56281 12 111 5.78E-5 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS07050 1d7ba9d76a20e833db10da049975f9b8 529 Gene3D G3DSA:3.20.20.450 290 527 3.4E-63 T 11-11-2016 IPR001633 EAL domain S40542_RS07050 1d7ba9d76a20e833db10da049975f9b8 529 SUPERFAMILY SSF141868 290 527 7.32E-63 T 11-11-2016 IPR001633 EAL domain S40542_RS07050 1d7ba9d76a20e833db10da049975f9b8 529 SMART SM00052 282 522 3.0E-67 T 11-11-2016 IPR001633 EAL domain S40542_RS07050 1d7ba9d76a20e833db10da049975f9b8 529 Pfam PF12792 CSS motif domain associated with EAL 43 125 9.7E-8 T 11-11-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain S40542_RS07050 1d7ba9d76a20e833db10da049975f9b8 529 Pfam PF00563 EAL domain 290 516 1.6E-55 T 11-11-2016 IPR001633 EAL domain S40542_RS00335 426aac3dbffbb133babc5bbe023ab5fb 413 Gene3D G3DSA:2.40.160.10 229 284 2.9E-12 T 11-11-2016 IPR023614 Porin domain S40542_RS00335 426aac3dbffbb133babc5bbe023ab5fb 413 Gene3D G3DSA:2.40.160.10 54 196 2.9E-12 T 11-11-2016 IPR023614 Porin domain S40542_RS00335 426aac3dbffbb133babc5bbe023ab5fb 413 SUPERFAMILY SSF56935 59 194 1.56E-8 T 11-11-2016 S40542_RS00335 426aac3dbffbb133babc5bbe023ab5fb 413 SUPERFAMILY SSF56935 226 368 1.56E-8 T 11-11-2016 S40542_RS12760 a0f754e8835590e82b58869d5329f263 529 Pfam PF04397 LytTr DNA-binding domain 435 528 1.3E-16 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS12760 a0f754e8835590e82b58869d5329f263 529 Gene3D G3DSA:2.40.50.40 424 490 4.6E-12 T 11-11-2016 S40542_RS12760 a0f754e8835590e82b58869d5329f263 529 SMART SM00850 432 529 7.8E-23 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS14355 0c6a837cb2040a0d632862e8b859b752 214 Gene3D G3DSA:3.40.50.170 4 196 5.0E-76 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS14355 0c6a837cb2040a0d632862e8b859b752 214 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 11-11-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS14355 0c6a837cb2040a0d632862e8b859b752 214 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 190 32.327 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 S40542_RS14355 0c6a837cb2040a0d632862e8b859b752 214 Pfam PF00551 Formyl transferase 5 184 3.5E-68 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS14355 0c6a837cb2040a0d632862e8b859b752 214 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 5 194 1.3E-81 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 S40542_RS14355 0c6a837cb2040a0d632862e8b859b752 214 SUPERFAMILY SSF53328 5 205 4.19E-69 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 S40542_RS09280 128fff1e5e2281604716f8e7d2cbedd4 235 Gene3D G3DSA:3.40.50.300 4 227 1.5E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09280 128fff1e5e2281604716f8e7d2cbedd4 235 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS09280 128fff1e5e2281604716f8e7d2cbedd4 235 Pfam PF00005 ABC transporter 25 173 4.8E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS09280 128fff1e5e2281604716f8e7d2cbedd4 235 SUPERFAMILY SSF52540 5 228 2.34E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS09280 128fff1e5e2281604716f8e7d2cbedd4 235 SMART SM00382 34 222 8.5E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS09280 128fff1e5e2281604716f8e7d2cbedd4 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 1.0E-103 T 11-11-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 S40542_RS12220 8f3ce6444430b29b9504a10f9c48c2bd 303 Gene3D G3DSA:3.40.50.300 7 162 5.6E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12220 8f3ce6444430b29b9504a10f9c48c2bd 303 Pfam PF13177 DNA polymerase III, delta subunit 9 161 5.5E-43 T 11-11-2016 S40542_RS12220 8f3ce6444430b29b9504a10f9c48c2bd 303 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 10 186 1.2E-54 T 11-11-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 S40542_RS12220 8f3ce6444430b29b9504a10f9c48c2bd 303 SUPERFAMILY SSF52540 3 183 3.41E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS05935 9854f04865a6c868fa7dbe25169d2237 218 Gene3D G3DSA:2.40.160.20 24 218 3.6E-61 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS05935 9854f04865a6c868fa7dbe25169d2237 218 Pfam PF03922 OmpW family 23 218 7.9E-52 T 11-11-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 S40542_RS05935 9854f04865a6c868fa7dbe25169d2237 218 SUPERFAMILY SSF56925 28 218 1.94E-23 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS15910 c947f689bf6316c21ea04c0108c92873 1046 SUPERFAMILY SSF53300 266 330 8.7E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS15910 c947f689bf6316c21ea04c0108c92873 1046 SUPERFAMILY SSF53300 37 48 8.7E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS15910 c947f689bf6316c21ea04c0108c92873 1046 SUPERFAMILY SSF53300 95 171 8.7E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS15910 c947f689bf6316c21ea04c0108c92873 1046 SUPERFAMILY SSF53300 207 225 8.7E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS15910 c947f689bf6316c21ea04c0108c92873 1046 Pfam PF05567 Neisseria PilC beta-propeller domain 522 750 1.1E-22 T 11-11-2016 IPR008707 PilC beta-propeller domain S40542_RS15910 c947f689bf6316c21ea04c0108c92873 1046 SUPERFAMILY SSF50998 618 747 3.45E-6 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily S40542_RS15910 c947f689bf6316c21ea04c0108c92873 1046 SUPERFAMILY SSF50998 884 937 3.45E-6 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily S40542_RS03530 a4b8c13ebb8563d753ebf70d31580e5c 224 Pfam PF02390 Putative methyltransferase 56 195 4.9E-13 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 S40542_RS03530 a4b8c13ebb8563d753ebf70d31580e5c 224 SUPERFAMILY SSF53335 46 187 9.69E-14 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS03530 a4b8c13ebb8563d753ebf70d31580e5c 224 Gene3D G3DSA:3.40.50.150 36 212 1.5E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS05860 27f5afc731f11b4123ee25019ceeaaf7 371 Gene3D G3DSA:2.70.70.10 219 363 1.3E-47 T 11-11-2016 S40542_RS05860 27f5afc731f11b4123ee25019ceeaaf7 371 SUPERFAMILY SSF51261 239 362 1.44E-51 T 11-11-2016 IPR011055 Duplicated hybrid motif S40542_RS05860 27f5afc731f11b4123ee25019ceeaaf7 371 Pfam PF01551 Peptidase family M23 266 360 4.7E-31 T 11-11-2016 IPR016047 Peptidase M23 S40542_RS11100 b06d00bed42b2323be6c9f33a8c5ab2b 168 Pfam PF13302 Acetyltransferase (GNAT) domain 7 148 4.3E-26 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS11100 b06d00bed42b2323be6c9f33a8c5ab2b 168 SUPERFAMILY SSF55729 2 150 1.54E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS11100 b06d00bed42b2323be6c9f33a8c5ab2b 168 Gene3D G3DSA:3.40.630.30 1 152 1.6E-31 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS00675 a0dcb20028ae04695280a7995a851df5 241 SUPERFAMILY SSF53850 33 218 2.28E-9 T 11-11-2016 S40542_RS04045 6d3f51cd66667352dc3b9755b67e2db2 93 Gene3D G3DSA:3.10.50.40 5 93 1.0E-33 T 11-11-2016 S40542_RS04045 6d3f51cd66667352dc3b9755b67e2db2 93 SUPERFAMILY SSF54534 5 92 2.49E-29 T 11-11-2016 S40542_RS04045 6d3f51cd66667352dc3b9755b67e2db2 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 11-11-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 S40542_RS04045 6d3f51cd66667352dc3b9755b67e2db2 93 Pfam PF00639 PPIC-type PPIASE domain 13 89 6.3E-22 T 11-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 S40542_RS02230 60da1ad19dd5e36b9b58927554782964 337 Pfam PF01548 Transposase 8 147 1.1E-12 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 S40542_RS02230 60da1ad19dd5e36b9b58927554782964 337 Pfam PF02371 Transposase IS116/IS110/IS902 family 208 284 2.7E-11 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 S40542_RS23210 fcd88c384c84b7ace15ebd03c1177672 159 Gene3D G3DSA:3.40.710.10 10 122 1.0E-10 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS23210 fcd88c384c84b7ace15ebd03c1177672 159 SUPERFAMILY SSF56601 6 123 4.83E-13 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS23210 fcd88c384c84b7ace15ebd03c1177672 159 Pfam PF00144 Beta-lactamase 13 120 4.4E-7 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS09270 ac4fd6e8a1daf7f492d1f0c4557eae74 555 Pfam PF01740 STAS domain 443 536 1.6E-9 T 11-11-2016 IPR002645 STAS domain S40542_RS09270 ac4fd6e8a1daf7f492d1f0c4557eae74 555 Gene3D G3DSA:3.30.750.24 441 543 2.1E-7 T 11-11-2016 IPR002645 STAS domain S40542_RS09270 ac4fd6e8a1daf7f492d1f0c4557eae74 555 Pfam PF00916 Sulfate permease family 12 377 1.1E-83 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 S40542_RS09270 ac4fd6e8a1daf7f492d1f0c4557eae74 555 SUPERFAMILY SSF52091 442 543 1.59E-8 T 11-11-2016 IPR002645 STAS domain S40542_RS14665 3840b7a0e8f16df7bb375da24ab7d183 312 SUPERFAMILY SSF74653 224 311 1.28E-16 T 11-11-2016 S40542_RS14665 3840b7a0e8f16df7bb375da24ab7d183 312 Gene3D G3DSA:3.30.1150.10 212 311 6.5E-30 T 11-11-2016 S40542_RS14665 3840b7a0e8f16df7bb375da24ab7d183 312 Pfam PF06519 TolA C-terminal 215 307 6.6E-27 T 11-11-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 S40542_RS14665 3840b7a0e8f16df7bb375da24ab7d183 312 TIGRFAM TIGR02794 tolA_full: protein TolA 7 310 7.7E-47 T 11-11-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 S40542_RS14030 9000a9c50d00b03692b33fcf3f9c8fac 343 SUPERFAMILY SSF51658 27 288 4.98E-27 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain S40542_RS14030 9000a9c50d00b03692b33fcf3f9c8fac 343 Gene3D G3DSA:3.20.20.150 3 334 8.2E-71 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain S40542_RS14030 9000a9c50d00b03692b33fcf3f9c8fac 343 Pfam PF01261 Xylose isomerase-like TIM barrel 34 250 2.4E-22 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain S40542_RS08500 f29aedc39867ea4e7c93801628f7c302 193 Pfam PF02525 Flavodoxin-like fold 3 182 9.7E-32 T 11-11-2016 IPR003680 Flavodoxin-like fold S40542_RS08500 f29aedc39867ea4e7c93801628f7c302 193 Gene3D G3DSA:3.40.50.360 1 192 4.2E-37 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS08500 f29aedc39867ea4e7c93801628f7c302 193 SUPERFAMILY SSF52218 1 192 5.03E-36 T 11-11-2016 IPR029039 Flavoprotein-like domain S40542_RS09370 dfd38b50e5a0b07d65f2e3b31d77b12a 217 SUPERFAMILY SSF55120 31 213 9.6E-45 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS09370 dfd38b50e5a0b07d65f2e3b31d77b12a 217 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 43 213 1.2E-61 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 S40542_RS09370 dfd38b50e5a0b07d65f2e3b31d77b12a 217 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 74 88 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 S40542_RS09370 dfd38b50e5a0b07d65f2e3b31d77b12a 217 Pfam PF00849 RNA pseudouridylate synthase 39 183 1.9E-19 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS11615 4fcad35f06d7f56a71f0a808b7d25052 484 Pfam PF03553 Na+/H+ antiporter family 166 473 2.4E-55 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 S40542_RS11615 4fcad35f06d7f56a71f0a808b7d25052 484 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 479 2.7E-140 T 11-11-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 S40542_RS03120 4626e678aa6506c18d3e3b2cb8b947eb 469 Pfam PF00155 Aminotransferase class I and II 164 332 7.7E-15 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 S40542_RS03120 4626e678aa6506c18d3e3b2cb8b947eb 469 SUPERFAMILY SSF46785 24 103 2.49E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03120 4626e678aa6506c18d3e3b2cb8b947eb 469 Gene3D G3DSA:3.40.640.10 142 352 3.1E-48 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS03120 4626e678aa6506c18d3e3b2cb8b947eb 469 Gene3D G3DSA:1.10.10.10 25 93 1.2E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS03120 4626e678aa6506c18d3e3b2cb8b947eb 469 SMART SM00345 33 92 1.2E-10 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS03120 4626e678aa6506c18d3e3b2cb8b947eb 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 92 1.1E-10 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 S40542_RS03120 4626e678aa6506c18d3e3b2cb8b947eb 469 SUPERFAMILY SSF53383 113 460 8.74E-57 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS10615 91ab15b2c5ef3116a0e9e5845d18ff3a 167 SUPERFAMILY SSF88946 10 96 6.28E-17 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS10615 91ab15b2c5ef3116a0e9e5845d18ff3a 167 Gene3D G3DSA:1.10.1740.10 9 101 7.5E-18 T 11-11-2016 S40542_RS10615 91ab15b2c5ef3116a0e9e5845d18ff3a 167 Pfam PF04542 Sigma-70 region 2 15 80 3.8E-14 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS10615 91ab15b2c5ef3116a0e9e5845d18ff3a 167 SUPERFAMILY SSF88659 92 164 1.68E-10 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS10615 91ab15b2c5ef3116a0e9e5845d18ff3a 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 161 1.3E-27 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS10615 91ab15b2c5ef3116a0e9e5845d18ff3a 167 Pfam PF08281 Sigma-70, region 4 109 159 2.4E-9 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 S40542_RS10615 91ab15b2c5ef3116a0e9e5845d18ff3a 167 Gene3D G3DSA:1.10.10.10 103 164 7.6E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11890 f3be74ba18a061ee235e07cd82880b86 575 Pfam PF04984 Phage tail sheath protein 383 568 6.6E-28 T 11-11-2016 IPR007067 Tail sheath protein S40542_RS14550 55ea19a39e469ed0495968cbeadc99dd 173 Pfam PF06127 Protein of unknown function (DUF962) 1 154 4.8E-24 T 11-11-2016 IPR009305 Protein of unknown function DUF962 S40542_RS19310 47510ec20d1a13f342a48e60a2183b73 328 PIRSF PIRSF029693 1 328 5.2E-146 T 11-11-2016 IPR016936 Uncharacterised conserved protein UCP029693 S40542_RS19310 47510ec20d1a13f342a48e60a2183b73 328 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 10 328 1.9E-147 T 11-11-2016 IPR016936 Uncharacterised conserved protein UCP029693 S40542_RS03685 9895c3a7328bfdd33ebc35716a18e4b1 85 PRINTS PR00160 Glutaredoxin signature 62 75 3.3E-18 T 11-11-2016 IPR014025 Glutaredoxin subgroup S40542_RS03685 9895c3a7328bfdd33ebc35716a18e4b1 85 PRINTS PR00160 Glutaredoxin signature 5 23 3.3E-18 T 11-11-2016 IPR014025 Glutaredoxin subgroup S40542_RS03685 9895c3a7328bfdd33ebc35716a18e4b1 85 PRINTS PR00160 Glutaredoxin signature 48 61 3.3E-18 T 11-11-2016 IPR014025 Glutaredoxin subgroup S40542_RS03685 9895c3a7328bfdd33ebc35716a18e4b1 85 SUPERFAMILY SSF52833 2 84 2.85E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS03685 9895c3a7328bfdd33ebc35716a18e4b1 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 5 84 3.8E-37 T 11-11-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 S40542_RS03685 9895c3a7328bfdd33ebc35716a18e4b1 85 Gene3D G3DSA:3.40.30.10 2 81 2.4E-31 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS03685 9895c3a7328bfdd33ebc35716a18e4b1 85 Pfam PF00462 Glutaredoxin 5 65 3.8E-24 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 S40542_RS03685 9895c3a7328bfdd33ebc35716a18e4b1 85 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 11-11-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 Gene3D G3DSA:3.30.1360.40 242 335 1.4E-23 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 Gene3D G3DSA:2.120.10.90 499 740 4.0E-27 T 11-11-2016 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 SMART SM00434 15 465 6.4E-232 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.234 T 11-11-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 SUPERFAMILY SSF101904 501 746 7.59E-52 T 11-11-2016 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 471 1.7E-135 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 SUPERFAMILY SSF56719 35 487 5.75E-155 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 Gene3D G3DSA:3.90.199.10 337 402 7.8E-107 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 Gene3D G3DSA:3.90.199.10 34 241 7.8E-107 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 746 0.0 T 11-11-2016 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 644 0.029 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS04645 56a12c86b08d65f31ec75b2096acb3e5 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 650 697 7.6E-4 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 S40542_RS12740 82571cc54dc98e286fa2b5229b71ae30 260 Pfam PF00520 Ion transport protein 11 229 2.8E-42 T 11-11-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 S40542_RS12740 82571cc54dc98e286fa2b5229b71ae30 260 SUPERFAMILY SSF81324 10 227 1.53E-34 T 11-11-2016 S40542_RS12740 82571cc54dc98e286fa2b5229b71ae30 260 Gene3D G3DSA:1.20.120.350 8 108 4.1E-14 T 11-11-2016 IPR027359 Voltage-dependent channel, four helix bundle domain S40542_RS03160 7dbda19187fad7f00be22c45fcbe506d 79 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 60 17.728 T 11-11-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 S40542_RS03160 7dbda19187fad7f00be22c45fcbe506d 79 Pfam PF03884 Domain of unknown function (DUF329) 5 52 3.5E-23 T 11-11-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 S40542_RS03160 7dbda19187fad7f00be22c45fcbe506d 79 Gene3D G3DSA:3.30.50.10 2 56 2.7E-23 T 11-11-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 S40542_RS03160 7dbda19187fad7f00be22c45fcbe506d 79 SUPERFAMILY SSF57716 2 48 3.71E-18 T 11-11-2016 S40542_RS05610 9becdd06c2c592548f0705b58a270213 217 Gene3D G3DSA:3.90.1550.10 3 202 6.9E-70 T 11-11-2016 S40542_RS05610 9becdd06c2c592548f0705b58a270213 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 11-11-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 S40542_RS05610 9becdd06c2c592548f0705b58a270213 217 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.246 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 S40542_RS05610 9becdd06c2c592548f0705b58a270213 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 3.3E-8 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 S40542_RS05610 9becdd06c2c592548f0705b58a270213 217 PIRSF PIRSF016262 1 217 1.9E-59 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 S40542_RS05610 9becdd06c2c592548f0705b58a270213 217 SUPERFAMILY SSF55681 3 205 2.15E-69 T 11-11-2016 S40542_RS05610 9becdd06c2c592548f0705b58a270213 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 1.0E-22 T 11-11-2016 S40542_RS05610 9becdd06c2c592548f0705b58a270213 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 201 7.9E-70 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 S40542_RS09190 01de85dd347e3fd2eadec9495abd4987 163 Pfam PF05751 FixH 8 148 4.4E-38 T 11-11-2016 IPR008620 Nitrogen fixation protein FixH S40542_RS01555 6427bfec0529f3d69c4a7c7013d6edd7 171 Pfam PF10675 Protein of unknown function (DUF2489) 16 155 3.4E-44 T 11-11-2016 IPR019617 Domain of unknown function DUF2489 S40542_RS03370 b40e5729f6fc341ce4b02d65b4591197 130 SUPERFAMILY SSF55298 3 127 5.03E-43 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS03370 b40e5729f6fc341ce4b02d65b4591197 130 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 8.6E-51 T 11-11-2016 IPR006056 RidA family S40542_RS03370 b40e5729f6fc341ce4b02d65b4591197 130 Pfam PF01042 Endoribonuclease L-PSP 9 125 1.3E-41 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family S40542_RS03370 b40e5729f6fc341ce4b02d65b4591197 130 Gene3D G3DSA:3.30.1330.40 4 123 6.8E-46 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS03370 b40e5729f6fc341ce4b02d65b4591197 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 11-11-2016 IPR019897 RidA, conserved site S40542_RS03470 58fabceaf38916f485e82779b889dee5 95 SUPERFAMILY SSF46689 5 93 1.97E-22 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS03470 58fabceaf38916f485e82779b889dee5 95 Pfam PF01527 Transposase 4 76 1.4E-15 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 S40542_RS03470 58fabceaf38916f485e82779b889dee5 95 Gene3D G3DSA:1.10.10.60 10 88 4.1E-22 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS12225 97fd6c3c427ab8c553f1254eb6025267 211 Gene3D G3DSA:3.40.50.300 4 207 5.6E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12225 97fd6c3c427ab8c553f1254eb6025267 211 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 197 2.4E-52 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 S40542_RS12225 97fd6c3c427ab8c553f1254eb6025267 211 SUPERFAMILY SSF52540 1 208 2.52E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12225 97fd6c3c427ab8c553f1254eb6025267 211 Pfam PF02223 Thymidylate kinase 10 197 2.0E-47 T 11-11-2016 S40542_RS12225 97fd6c3c427ab8c553f1254eb6025267 211 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 28.299 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 S40542_RS05365 6312917d0ca921eb965e8e3fca7bf11d 141 SUPERFAMILY SSF55729 41 109 1.92E-11 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS05365 6312917d0ca921eb965e8e3fca7bf11d 141 Pfam PF13508 Acetyltransferase (GNAT) domain 32 104 1.2E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS05365 6312917d0ca921eb965e8e3fca7bf11d 141 Gene3D G3DSA:3.40.630.30 28 114 6.4E-11 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS09045 b6716877cbf5d12a235c54de57509053 326 Pfam PF00326 Prolyl oligopeptidase family 134 326 1.6E-17 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS09045 b6716877cbf5d12a235c54de57509053 326 Gene3D G3DSA:3.40.50.1820 81 326 1.0E-35 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS09045 b6716877cbf5d12a235c54de57509053 326 SUPERFAMILY SSF53474 75 326 7.83E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS01240 a8d63bbc810a2e4e8ee2c76683bb0e47 643 SMART SM00283 381 642 4.9E-74 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS01240 a8d63bbc810a2e4e8ee2c76683bb0e47 643 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 438 640 9.2E-47 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS01240 a8d63bbc810a2e4e8ee2c76683bb0e47 643 SMART SM01358 37 283 4.6E-35 T 11-11-2016 IPR032255 Helical bimodular sensor domain S40542_RS01240 a8d63bbc810a2e4e8ee2c76683bb0e47 643 SUPERFAMILY SSF58104 344 642 2.75E-70 T 11-11-2016 S40542_RS01240 a8d63bbc810a2e4e8ee2c76683bb0e47 643 Gene3D G3DSA:1.10.287.950 395 613 7.7E-57 T 11-11-2016 S40542_RS20195 05344fb0ce30c09d64603c79e60d3631 293 SUPERFAMILY SSF103481 208 291 1.83E-6 T 11-11-2016 S40542_RS20195 05344fb0ce30c09d64603c79e60d3631 293 SUPERFAMILY SSF103481 38 142 1.96E-7 T 11-11-2016 S40542_RS20195 05344fb0ce30c09d64603c79e60d3631 293 Pfam PF00892 EamA-like transporter family 153 288 2.6E-6 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS14540 d5323e1270debe849e1f196db0bead00 196 SUPERFAMILY SSF54631 36 168 2.56E-18 T 11-11-2016 S40542_RS14540 d5323e1270debe849e1f196db0bead00 196 Pfam PF00571 CBS domain 108 169 1.2E-4 T 11-11-2016 IPR000644 CBS domain S40542_RS14540 d5323e1270debe849e1f196db0bead00 196 Pfam PF00571 CBS domain 37 88 0.0036 T 11-11-2016 IPR000644 CBS domain S40542_RS14540 d5323e1270debe849e1f196db0bead00 196 Gene3D G3DSA:3.10.580.10 37 168 1.3E-14 T 11-11-2016 S40542_RS14540 d5323e1270debe849e1f196db0bead00 196 SMART SM00116 44 92 20.0 T 11-11-2016 IPR000644 CBS domain S40542_RS14540 d5323e1270debe849e1f196db0bead00 196 SMART SM00116 124 169 0.4 T 11-11-2016 IPR000644 CBS domain S40542_RS15015 5dd82ba3244a8b34b02dc75b78a2ad9d 220 Pfam PF01863 Protein of unknown function DUF45 14 215 2.5E-42 T 11-11-2016 IPR002725 Protein of unknown function DUF45 S40542_RS14975 fa5398b66f9ab7eb088038ada78cd429 429 Pfam PF00860 Permease family 18 390 2.9E-53 T 11-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 S40542_RS14975 fa5398b66f9ab7eb088038ada78cd429 429 PIRSF PIRSF005353 1 429 2.1E-173 T 11-11-2016 IPR026033 Purine permease PbuG-like S40542_RS18260 861c83d687ec45b58247efd49d0df8a1 279 Gene3D G3DSA:3.20.20.140 1 277 1.2E-27 T 11-11-2016 S40542_RS18260 861c83d687ec45b58247efd49d0df8a1 279 SUPERFAMILY SSF51556 2 277 6.12E-33 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS18260 861c83d687ec45b58247efd49d0df8a1 279 Pfam PF04909 Amidohydrolase 4 277 4.6E-14 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS08180 3685d249a79d6bc0a7432cdf452163a2 170 ProSitePatterns PS00018 EF-hand calcium-binding domain. 54 66 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site S40542_RS03655 df7a7c7bc281aba7e9000f1dacbbe53f 139 SMART SM00116 87 135 2.3E-8 T 11-11-2016 IPR000644 CBS domain S40542_RS03655 df7a7c7bc281aba7e9000f1dacbbe53f 139 SMART SM00116 12 60 8.3E-9 T 11-11-2016 IPR000644 CBS domain S40542_RS03655 df7a7c7bc281aba7e9000f1dacbbe53f 139 Gene3D G3DSA:3.10.580.10 4 134 9.1E-31 T 11-11-2016 S40542_RS03655 df7a7c7bc281aba7e9000f1dacbbe53f 139 SUPERFAMILY SSF54631 3 133 4.8E-32 T 11-11-2016 S40542_RS03655 df7a7c7bc281aba7e9000f1dacbbe53f 139 Pfam PF00571 CBS domain 80 133 3.2E-12 T 11-11-2016 IPR000644 CBS domain S40542_RS03655 df7a7c7bc281aba7e9000f1dacbbe53f 139 Pfam PF00571 CBS domain 5 55 4.4E-14 T 11-11-2016 IPR000644 CBS domain S40542_RS21425 3136f593b7b65a47565fa174fc701301 239 SUPERFAMILY SSF50978 95 238 1.41E-22 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 S40542_RS21425 3136f593b7b65a47565fa174fc701301 239 Gene3D G3DSA:2.130.10.10 97 238 1.6E-21 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 SUPERFAMILY SSF54909 67 148 6.17E-19 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 Gene3D G3DSA:1.10.10.10 2 56 1.2E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 2.5E-19 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 8.1E-21 T 11-11-2016 S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 SMART SM00344 5 114 8.9E-52 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 4.5E-21 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 4.5E-21 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 4.5E-21 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 SUPERFAMILY SSF46785 4 64 3.97E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site S40542_RS11050 cd7e6e4e89bcfe9c6b1370f3fd6d23ca 159 Gene3D G3DSA:3.30.70.920 57 149 8.9E-30 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 SUPERFAMILY SSF51126 60 349 1.27E-19 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 Pfam PF13229 Right handed beta helix region 227 337 1.7E-7 T 11-11-2016 S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 Gene3D G3DSA:2.160.20.10 60 344 4.3E-17 T 11-11-2016 IPR012334 Pectin lyase fold S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 SMART SM00710 278 299 210.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 SMART SM00710 142 164 1700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 SMART SM00710 112 134 4800.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 SMART SM00710 300 322 500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 SMART SM00710 223 245 600.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 SMART SM00710 247 277 750.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat S40542_RS03090 2afc0ca19681341c70b47796d6ae4ea1 411 SMART SM00710 174 202 690.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 Gene3D G3DSA:2.40.240.10 4 96 1.0E-33 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 Gene3D G3DSA:2.170.120.20 99 196 2.2E-29 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 171 7.9E-46 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 189 1.5E-25 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 SUPERFAMILY SSF50715 4 195 2.79E-56 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 96 1.0E-34 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 Pfam PF01386 Ribosomal L25p family 6 93 7.8E-25 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 187 29.664 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 S40542_RS17695 4b6157f0a150b26fb14d4509cab9ee56 202 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 96 25.227 T 11-11-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 S40542_RS03365 19df334e27a3266445e77846e331e59d 536 Gene3D G3DSA:2.160.20.70 254 300 2.5E-6 T 11-11-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 S40542_RS03365 19df334e27a3266445e77846e331e59d 536 SUPERFAMILY SSF63848 256 297 4.18E-7 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 S40542_RS03365 19df334e27a3266445e77846e331e59d 536 Pfam PF03961 Protein of unknown function (DUF342) 68 530 6.4E-122 T 11-11-2016 IPR005646 Protein of unknown function DUF342 S40542_RS16675 8defe3f4522b84d750cee4b28c2e3cd7 397 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 312 386 1.0E-15 T 11-11-2016 IPR032388 Flagellar assembly protein T, C-terminal S40542_RS16675 8defe3f4522b84d750cee4b28c2e3cd7 397 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 22 109 9.1E-19 T 11-11-2016 IPR032370 Flagellar assembly protein T, N-terminal S40542_RS16675 8defe3f4522b84d750cee4b28c2e3cd7 397 Pfam PF16539 Flagellar assembly protein T, middle domain 112 268 1.7E-32 T 11-11-2016 IPR032386 Flagellar assembly protein T, middle domain S40542_RS03540 e0270ee80f4c058590eaca0598c648d7 543 Gene3D G3DSA:3.90.1150.10 395 528 3.8E-38 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 S40542_RS03540 e0270ee80f4c058590eaca0598c648d7 543 Gene3D G3DSA:3.40.640.10 114 394 1.6E-83 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 S40542_RS03540 e0270ee80f4c058590eaca0598c648d7 543 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 526 2.2E-294 T 11-11-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent S40542_RS03540 e0270ee80f4c058590eaca0598c648d7 543 SUPERFAMILY SSF53383 26 528 2.66E-113 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase S40542_RS03540 e0270ee80f4c058590eaca0598c648d7 543 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 60 441 1.3E-53 T 11-11-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 S40542_RS08635 cd7fda66ca356dfd27efade2dc0bc1fe 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 7.8E-45 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal S40542_RS08635 cd7fda66ca356dfd27efade2dc0bc1fe 404 SMART SM00825 Beta-ketoacyl synthase 4 404 4.6E-13 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain S40542_RS08635 cd7fda66ca356dfd27efade2dc0bc1fe 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 1.2E-28 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal S40542_RS08635 cd7fda66ca356dfd27efade2dc0bc1fe 404 SUPERFAMILY SSF53901 1 251 7.78E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08635 cd7fda66ca356dfd27efade2dc0bc1fe 404 Gene3D G3DSA:3.40.47.10 261 403 9.5E-51 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08635 cd7fda66ca356dfd27efade2dc0bc1fe 404 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site S40542_RS08635 cd7fda66ca356dfd27efade2dc0bc1fe 404 Gene3D G3DSA:3.40.47.10 6 257 3.1E-61 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08635 cd7fda66ca356dfd27efade2dc0bc1fe 404 SUPERFAMILY SSF53901 213 402 7.82E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS11910 1c7b254cac5fdec6cb60bb4cf58eff32 200 Pfam PF04773 FecR protein 52 146 1.8E-16 T 11-11-2016 IPR006860 FecR protein S40542_RS00070 f7106ce3752a8fedf950c7074c1a465b 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 4.3E-114 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 S40542_RS00070 f7106ce3752a8fedf950c7074c1a465b 483 PIRSF PIRSF006247 1 483 5.0E-180 T 11-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 S40542_RS00070 f7106ce3752a8fedf950c7074c1a465b 483 Pfam PF02386 Cation transport protein 39 477 5.3E-84 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 S40542_RS21925 3cd00a749aa145b09da8548c9646b378 288 Gene3D G3DSA:3.20.20.450 75 287 8.5E-47 T 11-11-2016 IPR001633 EAL domain S40542_RS21925 3cd00a749aa145b09da8548c9646b378 288 SMART SM00052 61 288 8.6E-17 T 11-11-2016 IPR001633 EAL domain S40542_RS21925 3cd00a749aa145b09da8548c9646b378 288 SUPERFAMILY SSF141868 68 287 3.92E-44 T 11-11-2016 IPR001633 EAL domain S40542_RS21925 3cd00a749aa145b09da8548c9646b378 288 Pfam PF00563 EAL domain 75 288 2.0E-44 T 11-11-2016 IPR001633 EAL domain S40542_RS03200 4d06fd0a468f61d04d6ec6e5f23033d3 294 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 292 3.6E-30 T 11-11-2016 IPR031347 Protein AmpE S40542_RS14120 c861a63c39c9e8a38fc324ea2bab78a2 443 Pfam PF01979 Amidohydrolase family 51 422 4.6E-15 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 S40542_RS14120 c861a63c39c9e8a38fc324ea2bab78a2 443 Gene3D G3DSA:2.30.40.10 4 69 2.0E-17 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS14120 c861a63c39c9e8a38fc324ea2bab78a2 443 SUPERFAMILY SSF51338 1 54 4.74E-26 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS14120 c861a63c39c9e8a38fc324ea2bab78a2 443 SUPERFAMILY SSF51338 368 430 4.74E-26 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 S40542_RS14120 c861a63c39c9e8a38fc324ea2bab78a2 443 Gene3D G3DSA:3.20.20.140 70 408 1.7E-94 T 11-11-2016 S40542_RS14120 c861a63c39c9e8a38fc324ea2bab78a2 443 SUPERFAMILY SSF51556 55 368 5.26E-88 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS14120 c861a63c39c9e8a38fc324ea2bab78a2 443 ProSitePatterns PS00483 Dihydroorotase signature 2. 304 315 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 S40542_RS23070 38177d0c13fe2a1dd054da96e76ac275 97 Gene3D G3DSA:3.40.50.720 2 86 7.5E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS23070 38177d0c13fe2a1dd054da96e76ac275 97 SUPERFAMILY SSF51735 2 86 1.48E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS23070 38177d0c13fe2a1dd054da96e76ac275 97 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 11 87 1.0E-12 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 S40542_RS10170 b074871d6fa2230a912f1346dfb02c79 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 6.4E-180 T 11-11-2016 IPR015004 Protein of unknown function DUF1852 S40542_RS10170 b074871d6fa2230a912f1346dfb02c79 324 PIRSF PIRSF034367 1 324 7.6E-188 T 11-11-2016 IPR015004 Protein of unknown function DUF1852 S40542_RS17590 798301cf2cccf8d65cc59c84bcbb3c58 243 SMART SM00248 68 97 0.1 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 S40542_RS17590 798301cf2cccf8d65cc59c84bcbb3c58 243 SMART SM00248 167 196 1500.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 S40542_RS17590 798301cf2cccf8d65cc59c84bcbb3c58 243 SMART SM00248 134 163 750.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 S40542_RS17590 798301cf2cccf8d65cc59c84bcbb3c58 243 SUPERFAMILY SSF48403 39 196 6.92E-25 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain S40542_RS17590 798301cf2cccf8d65cc59c84bcbb3c58 243 Gene3D G3DSA:1.25.40.20 39 196 4.0E-24 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain S40542_RS16510 8e91f60eb3e56e313d307d5e9368bb5e 279 PIRSF PIRSF020481 3 279 7.6E-64 T 11-11-2016 IPR014507 Baseplate assembly protein J, predicted S40542_RS16510 8e91f60eb3e56e313d307d5e9368bb5e 279 Pfam PF04865 Baseplate J-like protein 98 224 1.7E-15 T 11-11-2016 IPR006949 Baseplate protein J-like S40542_RS01995 71c863cab49c7eb0f19aae5dc5d522af 422 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 393 8.1E-81 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS01995 71c863cab49c7eb0f19aae5dc5d522af 422 Pfam PF01554 MatE 224 379 8.5E-17 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS01995 71c863cab49c7eb0f19aae5dc5d522af 422 Pfam PF01554 MatE 1 160 3.9E-21 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS10805 898badc7a53e7e76d274575561ce7dd4 153 Gene3D G3DSA:3.40.630.30 1 135 1.3E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS10805 898badc7a53e7e76d274575561ce7dd4 153 Pfam PF13673 Acetyltransferase (GNAT) domain 68 138 4.0E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS10805 898badc7a53e7e76d274575561ce7dd4 153 SUPERFAMILY SSF55729 3 134 8.78E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS19925 c0ec56fcfea3dd9e7b6ab5d53be7ce16 209 SUPERFAMILY SSF49503 48 159 7.05E-16 T 11-11-2016 IPR008972 Cupredoxin S40542_RS19925 c0ec56fcfea3dd9e7b6ab5d53be7ce16 209 Gene3D G3DSA:2.60.40.420 42 130 9.6E-9 T 11-11-2016 IPR008972 Cupredoxin S40542_RS03525 e82ab2825d95097c4be2dac7662fd9f0 487 SUPERFAMILY SSF53474 183 250 9.83E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS03525 e82ab2825d95097c4be2dac7662fd9f0 487 Gene3D G3DSA:3.40.50.1820 186 246 1.6E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS17205 fab4cf0aa46e4523d2a10419a438c82e 341 Pfam PF12069 Protein of unknown function (DUF3549) 4 340 2.3E-116 T 11-11-2016 IPR021936 Protein of unknown function DUF3549 S40542_RS18160 cfa5394152dc62d0defd1da0ee60a776 344 Gene3D G3DSA:2.40.10.240 64 141 3.0E-19 T 11-11-2016 S40542_RS18160 cfa5394152dc62d0defd1da0ee60a776 344 Pfam PF02547 Queuosine biosynthesis protein 4 340 2.9E-137 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 S40542_RS18160 cfa5394152dc62d0defd1da0ee60a776 344 Gene3D G3DSA:3.40.1780.10 1 62 5.6E-104 T 11-11-2016 S40542_RS18160 cfa5394152dc62d0defd1da0ee60a776 344 Gene3D G3DSA:3.40.1780.10 177 340 5.6E-104 T 11-11-2016 S40542_RS18160 cfa5394152dc62d0defd1da0ee60a776 344 SUPERFAMILY SSF111337 1 340 8.76E-140 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 S40542_RS18160 cfa5394152dc62d0defd1da0ee60a776 344 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 2.6E-156 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 S40542_RS18160 cfa5394152dc62d0defd1da0ee60a776 344 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 47.661 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 S40542_RS17630 0596bafc05ee9eef0b067ec48ecf7a5c 122 Pfam PF04241 Protein of unknown function (DUF423) 19 103 3.0E-30 T 11-11-2016 IPR006696 Protein of unknown function DUF423 S40542_RS07975 04f8aecf0ea026ccad6d93f019ebedcc 144 Gene3D G3DSA:3.40.630.30 8 126 1.2E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS07975 04f8aecf0ea026ccad6d93f019ebedcc 144 Pfam PF13480 Acetyltransferase (GNAT) domain 29 102 7.9E-6 T 11-11-2016 S40542_RS07975 04f8aecf0ea026ccad6d93f019ebedcc 144 SUPERFAMILY SSF55729 10 104 1.39E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS03740 07b6eb63ad757e7e5b1d678b280f2447 272 SUPERFAMILY SSF54001 2 265 5.64E-65 T 11-11-2016 S40542_RS03740 07b6eb63ad757e7e5b1d678b280f2447 272 Pfam PF00797 N-acetyltransferase 24 255 1.7E-48 T 11-11-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 S40542_RS03740 07b6eb63ad757e7e5b1d678b280f2447 272 Gene3D G3DSA:3.30.2140.10 183 263 1.9E-32 T 11-11-2016 S40542_RS03740 07b6eb63ad757e7e5b1d678b280f2447 272 Gene3D G3DSA:3.30.2140.10 3 86 1.9E-32 T 11-11-2016 S40542_RS03845 174c58faf5c98547e54be62a71119bc3 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 130 5.1E-18 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 S40542_RS15580 0bbb2f2e98e178ac72be0f7e23b62bf1 156 Pfam PF00578 AhpC/TSA family 7 135 6.6E-31 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS15580 0bbb2f2e98e178ac72be0f7e23b62bf1 156 SUPERFAMILY SSF52833 4 155 5.91E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS15580 0bbb2f2e98e178ac72be0f7e23b62bf1 156 Gene3D G3DSA:3.40.30.10 2 155 3.6E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS16180 ae2a8ef9c443adfc8aaf7b9e678d571a 137 Gene3D G3DSA:3.30.2130.10 1 132 3.6E-49 T 11-11-2016 S40542_RS16180 ae2a8ef9c443adfc8aaf7b9e678d571a 137 Pfam PF10000 ACT domain 2 72 5.4E-21 T 11-11-2016 IPR018717 Domain of unknown function DUF2241 S40542_RS16180 ae2a8ef9c443adfc8aaf7b9e678d571a 137 SUPERFAMILY SSF55021 2 67 6.87E-14 T 11-11-2016 S40542_RS16180 ae2a8ef9c443adfc8aaf7b9e678d571a 137 SUPERFAMILY SSF55021 70 131 9.16E-20 T 11-11-2016 S40542_RS19975 05a8de3e42bfc436f900146f15513c43 312 Gene3D G3DSA:3.40.50.150 85 308 1.2E-57 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS19975 05a8de3e42bfc436f900146f15513c43 312 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 24 307 1.1E-132 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 S40542_RS19975 05a8de3e42bfc436f900146f15513c43 312 SUPERFAMILY SSF53335 34 278 1.52E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 37.239 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 Pfam PF06480 FtsH Extracellular 5 99 4.1E-10 T 11-11-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 SUPERFAMILY SSF52540 146 393 8.52E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 Gene3D G3DSA:1.10.8.60 334 407 5.2E-28 T 11-11-2016 S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 1.8E-46 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 595 1.4E-241 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 SUPERFAMILY SSF140990 404 605 2.49E-72 T 11-11-2016 S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 SMART SM00382 186 325 8.7E-26 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 Gene3D G3DSA:3.40.50.300 149 333 2.1E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15430 4997c56ffb1588bbb3b31a0fdb92ec5c 645 Pfam PF01434 Peptidase family M41 384 593 2.9E-79 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 S40542_RS12900 3e594bb2d2d732a0217995de4bc117de 149 Pfam PF13508 Acetyltransferase (GNAT) domain 51 124 3.0E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS12900 3e594bb2d2d732a0217995de4bc117de 149 SUPERFAMILY SSF55729 1 130 1.54E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12900 3e594bb2d2d732a0217995de4bc117de 149 Gene3D G3DSA:3.40.630.30 1 133 7.3E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS05575 015be63140de1003e1d278c14d2dbde9 286 Gene3D G3DSA:1.20.1050.10 131 254 2.7E-42 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS05575 015be63140de1003e1d278c14d2dbde9 286 Gene3D G3DSA:3.40.30.10 34 130 4.8E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS05575 015be63140de1003e1d278c14d2dbde9 286 Pfam PF13410 Glutathione S-transferase, C-terminal domain 180 244 6.5E-10 T 11-11-2016 S40542_RS05575 015be63140de1003e1d278c14d2dbde9 286 SUPERFAMILY SSF52833 38 130 5.25E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS05575 015be63140de1003e1d278c14d2dbde9 286 SUPERFAMILY SSF47616 181 259 3.06E-34 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS05575 015be63140de1003e1d278c14d2dbde9 286 SUPERFAMILY SSF47616 117 152 3.06E-34 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like S40542_RS05575 015be63140de1003e1d278c14d2dbde9 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 127 3.1E-9 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 S40542_RS08680 d7bfe25d6e923433719b9126763d9aca 80 SUPERFAMILY SSF64307 10 66 6.15E-6 T 11-11-2016 IPR001455 TusA-like domain S40542_RS08680 d7bfe25d6e923433719b9126763d9aca 80 Gene3D G3DSA:3.30.110.40 9 63 1.1E-5 T 11-11-2016 IPR001455 TusA-like domain S40542_RS09330 6f9e857a34dd68c9672085ea3f57ed5f 122 SMART SM00448 3 116 7.4E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09330 6f9e857a34dd68c9672085ea3f57ed5f 122 Gene3D G3DSA:3.40.50.2300 2 120 4.7E-37 T 11-11-2016 S40542_RS09330 6f9e857a34dd68c9672085ea3f57ed5f 122 Pfam PF00072 Response regulator receiver domain 5 116 4.6E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS09330 6f9e857a34dd68c9672085ea3f57ed5f 122 SUPERFAMILY SSF52172 3 120 6.69E-36 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS14570 cd605edfd4f6f8feb879a17ec61b4888 342 SMART SM00267 137 321 2.3E-32 T 11-11-2016 IPR000160 GGDEF domain S40542_RS14570 cd605edfd4f6f8feb879a17ec61b4888 342 SUPERFAMILY SSF55073 153 322 4.0E-38 T 11-11-2016 IPR029787 Nucleotide cyclase S40542_RS14570 cd605edfd4f6f8feb879a17ec61b4888 342 Pfam PF00990 Diguanylate cyclase, GGDEF domain 150 317 3.3E-34 T 11-11-2016 IPR000160 GGDEF domain S40542_RS14570 cd605edfd4f6f8feb879a17ec61b4888 342 Gene3D G3DSA:3.30.70.270 150 325 1.2E-44 T 11-11-2016 S40542_RS14570 cd605edfd4f6f8feb879a17ec61b4888 342 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 149 318 1.1E-33 T 11-11-2016 IPR000160 GGDEF domain S40542_RS19870 516a6b6c868e716f7559ab62e7f28476 225 SUPERFAMILY SSF49299 24 62 8.11E-11 T 11-11-2016 IPR000601 PKD domain S40542_RS19870 516a6b6c868e716f7559ab62e7f28476 225 Pfam PF00801 PKD domain 96 148 5.6E-7 T 11-11-2016 IPR000601 PKD domain S40542_RS19870 516a6b6c868e716f7559ab62e7f28476 225 Gene3D G3DSA:2.60.40.670 92 164 2.3E-6 T 11-11-2016 IPR000601 PKD domain S40542_RS19870 516a6b6c868e716f7559ab62e7f28476 225 SUPERFAMILY SSF49299 105 165 3.79E-5 T 11-11-2016 IPR000601 PKD domain S40542_RS19870 516a6b6c868e716f7559ab62e7f28476 225 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 204 225 1.3E-4 T 11-11-2016 IPR020008 GlyGly-CTERM domain S40542_RS19870 516a6b6c868e716f7559ab62e7f28476 225 Gene3D G3DSA:2.60.40.670 25 62 2.5E-10 T 11-11-2016 IPR000601 PKD domain S40542_RS02325 d0a102dcdb220d0e88961465f27d1830 449 Pfam PF13742 OB-fold nucleic acid binding domain 10 102 1.6E-29 T 11-11-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 S40542_RS02325 d0a102dcdb220d0e88961465f27d1830 449 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 442 29.865 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS02325 d0a102dcdb220d0e88961465f27d1830 449 Pfam PF02601 Exonuclease VII, large subunit 126 439 3.8E-101 T 11-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 S40542_RS02325 d0a102dcdb220d0e88961465f27d1830 449 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 1.3E-135 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 S40542_RS07695 4957c61661708408cc8068894ac5179f 2309 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1947 2037 2.7E-15 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 S40542_RS07695 4957c61661708408cc8068894ac5179f 2309 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 178 410 2.7E-12 T 11-11-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 S40542_RS07695 4957c61661708408cc8068894ac5179f 2309 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1487 1522 6.8E-6 T 11-11-2016 IPR006530 YD repeat S40542_RS07695 4957c61661708408cc8068894ac5179f 2309 Pfam PF05593 RHS Repeat 1487 1522 2.7E-5 T 11-11-2016 IPR031325 RHS repeat S40542_RS07695 4957c61661708408cc8068894ac5179f 2309 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 883 1042 3.2E-9 T 11-11-2016 IPR022045 Insecticide toxin TcdB middle/N-terminal S40542_RS07695 4957c61661708408cc8068894ac5179f 2309 SUPERFAMILY SSF69318 470 805 9.59E-18 T 11-11-2016 S40542_RS07695 4957c61661708408cc8068894ac5179f 2309 SUPERFAMILY SSF69318 848 896 9.59E-18 T 11-11-2016 S40542_RS10540 512a08da21e93758c830ab05bb9b79d5 978 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 163 234 1.9E-17 T 11-11-2016 IPR013491 Caudovirus, tape measure, N-terminal S40542_RS03290 d7b5366ac55c85576eee18ce48a8eb78 324 Pfam PF00348 Polyprenyl synthetase 32 263 1.9E-73 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 S40542_RS03290 d7b5366ac55c85576eee18ce48a8eb78 324 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 204 216 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 S40542_RS03290 d7b5366ac55c85576eee18ce48a8eb78 324 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 96 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 S40542_RS03290 d7b5366ac55c85576eee18ce48a8eb78 324 SUPERFAMILY SSF48576 6 324 1.24E-94 T 11-11-2016 IPR008949 Isoprenoid synthase domain S40542_RS03290 d7b5366ac55c85576eee18ce48a8eb78 324 Gene3D G3DSA:1.10.600.10 3 323 6.2E-95 T 11-11-2016 IPR008949 Isoprenoid synthase domain S40542_RS02785 5014a794e4e3840da5df8414df2bc5ce 217 Pfam PF12973 ChrR Cupin-like domain 18 108 2.9E-41 T 11-11-2016 IPR025979 ChrR-like cupin domain S40542_RS02785 5014a794e4e3840da5df8414df2bc5ce 217 Pfam PF12973 ChrR Cupin-like domain 126 211 1.4E-30 T 11-11-2016 IPR025979 ChrR-like cupin domain S40542_RS02785 5014a794e4e3840da5df8414df2bc5ce 217 Gene3D G3DSA:2.60.120.10 16 126 3.3E-46 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS02785 5014a794e4e3840da5df8414df2bc5ce 217 Gene3D G3DSA:2.60.120.10 127 216 2.2E-29 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS02785 5014a794e4e3840da5df8414df2bc5ce 217 SUPERFAMILY SSF51182 118 215 1.32E-22 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS02785 5014a794e4e3840da5df8414df2bc5ce 217 SUPERFAMILY SSF51182 2 128 9.68E-40 T 11-11-2016 IPR011051 RmlC-like cupin domain S40542_RS02995 37d20104a708d6eb88cce20521abe31a 210 Gene3D G3DSA:2.60.130.10 27 208 2.0E-54 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 S40542_RS02995 37d20104a708d6eb88cce20521abe31a 210 Pfam PF00775 Dioxygenase 37 208 5.5E-30 T 11-11-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 S40542_RS02995 37d20104a708d6eb88cce20521abe31a 210 SUPERFAMILY SSF49482 12 208 3.53E-51 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 S40542_RS02995 37d20104a708d6eb88cce20521abe31a 210 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 70 98 - T 11-11-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 S40542_RS06800 4c3f0600da76522b888f251117860ca2 688 Gene3D G3DSA:2.120.10.30 108 228 7.5E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS06800 4c3f0600da76522b888f251117860ca2 688 Pfam PF16130 Domain of unknown function (DUF4842) 452 671 1.1E-51 T 11-11-2016 IPR032295 Domain of unknown function DUF4842 S40542_RS06800 4c3f0600da76522b888f251117860ca2 688 SUPERFAMILY SSF69322 36 240 1.44E-10 T 11-11-2016 S40542_RS06800 4c3f0600da76522b888f251117860ca2 688 SUPERFAMILY SSF69322 311 336 1.44E-10 T 11-11-2016 S40542_RS06800 4c3f0600da76522b888f251117860ca2 688 TIGRFAM TIGR04456 LruC_dom: LruC domain 421 672 2.7E-77 T 11-11-2016 IPR031025 LruC domain S40542_RS04845 4b9401b15e353c4203ed12df03c99844 543 Gene3D G3DSA:1.10.3720.10 13 265 6.0E-31 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS04845 4b9401b15e353c4203ed12df03c99844 543 Gene3D G3DSA:1.10.3720.10 292 540 8.1E-29 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS04845 4b9401b15e353c4203ed12df03c99844 543 SUPERFAMILY SSF161098 11 258 5.7E-40 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS04845 4b9401b15e353c4203ed12df03c99844 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 260 2.1E-10 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS04845 4b9401b15e353c4203ed12df03c99844 543 SUPERFAMILY SSF161098 286 537 1.5E-38 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 S40542_RS00915 974af90952f410bccdcfdc204dd28683 280 Pfam PF01522 Polysaccharide deacetylase 43 157 2.6E-18 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 S40542_RS00915 974af90952f410bccdcfdc204dd28683 280 Gene3D G3DSA:3.20.20.370 31 272 3.7E-30 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 S40542_RS00915 974af90952f410bccdcfdc204dd28683 280 SUPERFAMILY SSF88713 37 271 1.14E-30 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 S40542_RS06305 b446360049b73f54129f8fc8a7a3bc97 346 Pfam PF08666 SAF domain 288 345 3.3E-5 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 S40542_RS06305 b446360049b73f54129f8fc8a7a3bc97 346 SUPERFAMILY SSF51569 6 297 3.05E-87 T 11-11-2016 S40542_RS06305 b446360049b73f54129f8fc8a7a3bc97 346 SUPERFAMILY SSF51269 285 345 4.58E-13 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 S40542_RS06305 b446360049b73f54129f8fc8a7a3bc97 346 Gene3D G3DSA:3.20.20.70 7 276 1.6E-103 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS06305 b446360049b73f54129f8fc8a7a3bc97 346 Gene3D G3DSA:3.90.1210.10 288 345 8.0E-16 T 11-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal Reactome: R-HSA-4085001 S40542_RS06305 b446360049b73f54129f8fc8a7a3bc97 346 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 20 339 2.0E-131 T 11-11-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 S40542_RS06305 b446360049b73f54129f8fc8a7a3bc97 346 Pfam PF03102 NeuB family 40 277 5.5E-89 T 11-11-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 S40542_RS06305 b446360049b73f54129f8fc8a7a3bc97 346 SMART SM00858 287 346 5.3E-7 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 S40542_RS03115 1d7e639f84b65d69c1ddffae9d65b471 211 Pfam PF01810 LysE type translocator 25 200 1.4E-12 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS05660 4746884797a41f240ecc5a946d2a2213 186 Gene3D G3DSA:3.30.160.150 41 185 3.8E-39 T 11-11-2016 S40542_RS05660 4746884797a41f240ecc5a946d2a2213 186 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 26 186 20.539 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 S40542_RS05660 4746884797a41f240ecc5a946d2a2213 186 Pfam PF04390 Lipopolysaccharide-assembly 32 183 3.7E-18 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 S40542_RS06785 69c9c8cc69fb8221fda3cfeaef0084d6 399 SUPERFAMILY SSF63825 188 396 1.83E-16 T 11-11-2016 S40542_RS06785 69c9c8cc69fb8221fda3cfeaef0084d6 399 Pfam PF04862 Protein of unknown function (DUF642) 21 168 4.3E-10 T 11-11-2016 IPR006946 Domain of unknown function DUF642 S40542_RS06785 69c9c8cc69fb8221fda3cfeaef0084d6 399 SUPERFAMILY SSF49785 20 170 3.23E-5 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS06785 69c9c8cc69fb8221fda3cfeaef0084d6 399 Gene3D G3DSA:2.60.120.260 22 170 1.3E-7 T 11-11-2016 IPR008979 Galactose-binding domain-like S40542_RS06785 69c9c8cc69fb8221fda3cfeaef0084d6 399 Gene3D G3DSA:2.130.10.10 190 395 8.4E-11 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS19735 4c4ac9c095ba9b2391a81441931f5d97 229 PRINTS PR01399 Enterobactin synthetase component D signature 48 68 7.1E-19 T 11-11-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 S40542_RS19735 4c4ac9c095ba9b2391a81441931f5d97 229 PRINTS PR01399 Enterobactin synthetase component D signature 78 96 7.1E-19 T 11-11-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 S40542_RS19735 4c4ac9c095ba9b2391a81441931f5d97 229 PRINTS PR01399 Enterobactin synthetase component D signature 155 171 7.1E-19 T 11-11-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 S40542_RS19735 4c4ac9c095ba9b2391a81441931f5d97 229 SUPERFAMILY SSF56214 110 219 1.4E-12 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 S40542_RS19735 4c4ac9c095ba9b2391a81441931f5d97 229 Gene3D G3DSA:3.90.470.20 110 223 1.3E-8 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 S40542_RS19735 4c4ac9c095ba9b2391a81441931f5d97 229 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 196 8.3E-12 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 S40542_RS06315 2473614c3b52d2cc0bb4af4c0821ed03 528 Gene3D G3DSA:3.40.50.2000 162 314 1.1E-7 T 11-11-2016 S40542_RS06315 2473614c3b52d2cc0bb4af4c0821ed03 528 SUPERFAMILY SSF53756 9 334 2.98E-8 T 11-11-2016 S40542_RS06315 2473614c3b52d2cc0bb4af4c0821ed03 528 SUPERFAMILY SSF55729 362 503 6.37E-5 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS08770 52c1abb4c35ed73f743b6d624a9a47bd 282 SUPERFAMILY SSF52540 31 252 8.3E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS08770 52c1abb4c35ed73f743b6d624a9a47bd 282 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 45 158 5.9E-5 T 11-11-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 S40542_RS08770 52c1abb4c35ed73f743b6d624a9a47bd 282 Gene3D G3DSA:3.40.50.300 30 279 1.9E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS00890 c689c3df7e7a768966771451df228642 228 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 8 219 1.6E-50 T 11-11-2016 IPR010239 Conserved hypothetical protein CHP02001 S40542_RS00890 c689c3df7e7a768966771451df228642 228 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 20 216 7.8E-37 T 11-11-2016 IPR010239 Conserved hypothetical protein CHP02001 S40542_RS00515 94f11bdc8002bad4edeb5aca5e49f431 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.138 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 S40542_RS00515 94f11bdc8002bad4edeb5aca5e49f431 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 S40542_RS00515 94f11bdc8002bad4edeb5aca5e49f431 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 20 250 2.8E-100 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 S40542_RS00515 94f11bdc8002bad4edeb5aca5e49f431 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 S40542_RS00515 94f11bdc8002bad4edeb5aca5e49f431 251 SUPERFAMILY SSF53335 21 248 3.25E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS00515 94f11bdc8002bad4edeb5aca5e49f431 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 2.0E-86 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 S40542_RS00515 94f11bdc8002bad4edeb5aca5e49f431 251 Gene3D G3DSA:3.40.50.150 25 247 2.3E-59 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS04280 5c2bfe3ad931bb04814cc117815c4244 99 Pfam PF12305 Protein of unknown function (DUF3630) 4 90 1.1E-16 T 11-11-2016 IPR022080 Protein of unknown function DUF3630 S40542_RS11345 4b907ef384792f93741e26547e23e129 213 Gene3D G3DSA:3.60.15.10 6 209 7.9E-56 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS11345 4b907ef384792f93741e26547e23e129 213 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 2.0E-30 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS11345 4b907ef384792f93741e26547e23e129 213 SMART SM00849 12 192 2.4E-33 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS11345 4b907ef384792f93741e26547e23e129 213 SUPERFAMILY SSF56281 1 208 4.06E-55 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS09510 22cd97de9f1e909cdb7838b79c80d6a1 378 Gene3D G3DSA:1.25.40.10 287 308 3.2E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09510 22cd97de9f1e909cdb7838b79c80d6a1 378 Gene3D G3DSA:1.25.40.10 39 254 3.2E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS09510 22cd97de9f1e909cdb7838b79c80d6a1 378 SUPERFAMILY SSF48452 39 240 2.88E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS00320 e71644a78a11bffc2893fd27f2dac48c 146 Pfam PF16267 Domain of unknown function (DUF4920) 45 114 4.5E-12 T 11-11-2016 IPR032577 Protein of unknown function DUF4920 S40542_RS13540 88f8d42f02771575ce5d9fef1e3cd37c 2022 SUPERFAMILY SSF49299 90 180 5.49E-6 T 11-11-2016 IPR000601 PKD domain S40542_RS13540 88f8d42f02771575ce5d9fef1e3cd37c 2022 Gene3D G3DSA:3.80.10.10 1689 1992 3.5E-29 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS13540 88f8d42f02771575ce5d9fef1e3cd37c 2022 SUPERFAMILY SSF52058 1823 1996 3.74E-15 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS13540 88f8d42f02771575ce5d9fef1e3cd37c 2022 SUPERFAMILY SSF52058 1673 1836 1.79E-9 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS13540 88f8d42f02771575ce5d9fef1e3cd37c 2022 SMART SM00089 94 182 3.0 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS13540 88f8d42f02771575ce5d9fef1e3cd37c 2022 SMART SM00089 281 373 0.095 T 11-11-2016 IPR022409 PKD/Chitinase domain S40542_RS05025 235dea4cac65dd991ddebc112b7b5e31 199 SMART SM00855 4 155 2.0E-12 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 S40542_RS05025 235dea4cac65dd991ddebc112b7b5e31 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 172 1.5E-35 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 S40542_RS05025 235dea4cac65dd991ddebc112b7b5e31 199 SUPERFAMILY SSF53254 3 184 3.43E-38 T 11-11-2016 IPR029033 Histidine phosphatase superfamily S40542_RS05025 235dea4cac65dd991ddebc112b7b5e31 199 Gene3D G3DSA:3.40.50.1240 4 172 7.8E-38 T 11-11-2016 IPR029033 Histidine phosphatase superfamily S40542_RS08495 03dcc1654cbfa6aa4417d72d8a72fc2f 180 Gene3D G3DSA:3.40.30.10 7 160 2.2E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS08495 03dcc1654cbfa6aa4417d72d8a72fc2f 180 SUPERFAMILY SSF52833 9 178 1.23E-28 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS08495 03dcc1654cbfa6aa4417d72d8a72fc2f 180 Pfam PF00578 AhpC/TSA family 12 143 2.9E-17 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS14335 cd2d5e01ec5c58c8067973eb447e9ce1 195 Gene3D G3DSA:3.10.450.50 110 166 4.2E-19 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS14335 cd2d5e01ec5c58c8067973eb447e9ce1 195 Gene3D G3DSA:3.10.450.50 22 66 4.2E-19 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS14335 cd2d5e01ec5c58c8067973eb447e9ce1 195 Gene3D G3DSA:1.10.10.640 167 194 5.4E-6 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical S40542_RS14335 cd2d5e01ec5c58c8067973eb447e9ce1 195 Gene3D G3DSA:1.10.10.640 69 107 5.4E-6 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical S40542_RS14335 cd2d5e01ec5c58c8067973eb447e9ce1 195 Pfam PF05494 MlaC protein 29 193 6.3E-39 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC S40542_RS14335 cd2d5e01ec5c58c8067973eb447e9ce1 195 PIRSF PIRSF004649 2 195 9.1E-49 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC S40542_RS02145 edb7a824d66f47e12458257702b84a9d 324 Gene3D G3DSA:3.90.1200.10 104 320 1.6E-46 T 11-11-2016 S40542_RS02145 edb7a824d66f47e12458257702b84a9d 324 Pfam PF01636 Phosphotransferase enzyme family 32 254 9.7E-36 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase S40542_RS02145 edb7a824d66f47e12458257702b84a9d 324 Hamap MF_01497 Stress response kinase A [srkA]. 2 316 46.721 T 11-11-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 S40542_RS02145 edb7a824d66f47e12458257702b84a9d 324 SUPERFAMILY SSF56112 4 320 1.08E-84 T 11-11-2016 IPR011009 Protein kinase-like domain S40542_RS15110 af5061e8d8ee18e6d88583617b984b7e 141 SUPERFAMILY SSF55729 13 121 2.28E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15110 af5061e8d8ee18e6d88583617b984b7e 141 Pfam PF13673 Acetyltransferase (GNAT) domain 30 121 3.0E-11 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS15110 af5061e8d8ee18e6d88583617b984b7e 141 Gene3D G3DSA:3.40.630.30 10 122 7.1E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS02915 f51317c9e5712803e09a145db7f21ae7 230 Gene3D G3DSA:1.10.3680.10 54 77 2.4E-11 T 11-11-2016 IPR029024 TerB-like S40542_RS02915 f51317c9e5712803e09a145db7f21ae7 230 Gene3D G3DSA:1.10.3680.10 110 227 2.4E-11 T 11-11-2016 IPR029024 TerB-like S40542_RS02915 f51317c9e5712803e09a145db7f21ae7 230 SUPERFAMILY SSF158682 110 227 1.15E-12 T 11-11-2016 IPR029024 TerB-like S40542_RS02915 f51317c9e5712803e09a145db7f21ae7 230 SUPERFAMILY SSF158682 55 71 1.15E-12 T 11-11-2016 IPR029024 TerB-like S40542_RS02915 f51317c9e5712803e09a145db7f21ae7 230 Pfam PF04391 Protein of unknown function (DUF533) 22 227 8.9E-57 T 11-11-2016 IPR007486 Inner membrane protein YebE S40542_RS14240 9b4833163dd4fff00d0c25231278b874 99 SUPERFAMILY SSF54909 1 97 4.83E-30 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS14240 9b4833163dd4fff00d0c25231278b874 99 Pfam PF03795 YCII-related domain 1 94 4.6E-27 T 11-11-2016 IPR005545 YCII-related S40542_RS14240 9b4833163dd4fff00d0c25231278b874 99 Gene3D G3DSA:3.30.70.1060 1 98 1.9E-34 T 11-11-2016 S40542_RS07160 a1c24fe685d1e15046b1103b2046cb7d 609 SUPERFAMILY SSF49313 42 115 4.94E-5 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 S40542_RS07160 a1c24fe685d1e15046b1103b2046cb7d 609 Gene3D G3DSA:2.60.40.10 47 118 1.3E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS07725 56b1dce2cca1cbe77e774f476d1eded4 676 Gene3D G3DSA:2.60.120.200 447 671 1.1E-8 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS07725 56b1dce2cca1cbe77e774f476d1eded4 676 Gene3D G3DSA:2.60.40.10 219 315 6.4E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS07725 56b1dce2cca1cbe77e774f476d1eded4 676 SUPERFAMILY SSF49265 38 217 2.13E-5 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 S40542_RS07725 56b1dce2cca1cbe77e774f476d1eded4 676 SUPERFAMILY SSF49899 458 671 2.06E-9 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS07725 56b1dce2cca1cbe77e774f476d1eded4 676 SUPERFAMILY SSF49899 361 395 2.06E-9 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS07725 56b1dce2cca1cbe77e774f476d1eded4 676 Gene3D G3DSA:2.60.40.10 37 117 4.4E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS08735 8d8365fd303b48a433780cf193b5f215 341 Pfam PF01112 Asparaginase 28 339 9.3E-120 T 11-11-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 S40542_RS08735 8d8365fd303b48a433780cf193b5f215 341 SUPERFAMILY SSF56235 205 337 1.95E-97 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS08735 8d8365fd303b48a433780cf193b5f215 341 SUPERFAMILY SSF56235 27 178 1.95E-97 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS19615 c25f67b6c3705f08726c0940c0e9afa1 297 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 295 5.7E-41 T 11-11-2016 IPR012660 Thioesterase, putative S40542_RS19615 c25f67b6c3705f08726c0940c0e9afa1 297 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 296 3.4E-47 T 11-11-2016 IPR012660 Thioesterase, putative S40542_RS19615 c25f67b6c3705f08726c0940c0e9afa1 297 SUPERFAMILY SSF55729 4 144 1.18E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS19615 c25f67b6c3705f08726c0940c0e9afa1 297 Pfam PF00583 Acetyltransferase (GNAT) family 51 123 8.5E-11 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS19615 c25f67b6c3705f08726c0940c0e9afa1 297 Gene3D G3DSA:3.10.129.10 150 296 9.8E-52 T 11-11-2016 IPR029069 HotDog domain S40542_RS19615 c25f67b6c3705f08726c0940c0e9afa1 297 Gene3D G3DSA:3.40.630.30 5 142 5.8E-28 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS19615 c25f67b6c3705f08726c0940c0e9afa1 297 SUPERFAMILY SSF54637 153 296 4.98E-39 T 11-11-2016 IPR029069 HotDog domain S40542_RS04175 42f8322756888eae57b70b65c695822d 391 Pfam PF13378 Enolase C-terminal domain-like 149 380 3.8E-51 T 11-11-2016 IPR029065 Enolase C-terminal domain-like S40542_RS04175 42f8322756888eae57b70b65c695822d 391 SUPERFAMILY SSF51604 106 384 5.63E-75 T 11-11-2016 IPR029065 Enolase C-terminal domain-like S40542_RS04175 42f8322756888eae57b70b65c695822d 391 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 22 118 7.3E-20 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain S40542_RS04175 42f8322756888eae57b70b65c695822d 391 Gene3D G3DSA:3.20.20.120 126 378 8.3E-78 T 11-11-2016 IPR029065 Enolase C-terminal domain-like S40542_RS04175 42f8322756888eae57b70b65c695822d 391 SUPERFAMILY SSF54826 1 122 1.84E-30 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS04175 42f8322756888eae57b70b65c695822d 391 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 93 118 - T 11-11-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 S40542_RS04175 42f8322756888eae57b70b65c695822d 391 Gene3D G3DSA:3.30.390.10 1 125 6.3E-44 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 S40542_RS04175 42f8322756888eae57b70b65c695822d 391 SMART SM00922 146 260 1.7E-17 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal S40542_RS06180 aa8b80264523e7c245e08b3ece0b05c0 220 Gene3D G3DSA:3.40.50.150 3 212 2.3E-33 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS06180 aa8b80264523e7c245e08b3ece0b05c0 220 SUPERFAMILY SSF53335 4 202 4.97E-33 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS06180 aa8b80264523e7c245e08b3ece0b05c0 220 Pfam PF13847 Methyltransferase domain 34 142 1.1E-21 T 11-11-2016 IPR025714 Methyltransferase domain S40542_RS00745 3abb1ccdd24413bc9b5b03a86cc80677 85 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 23.443 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 S40542_RS00745 3abb1ccdd24413bc9b5b03a86cc80677 85 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 1.6E-33 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 S40542_RS00745 3abb1ccdd24413bc9b5b03a86cc80677 85 Gene3D G3DSA:1.10.10.610 1 76 4.7E-36 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 S40542_RS00745 3abb1ccdd24413bc9b5b03a86cc80677 85 PIRSF PIRSF006169 1 76 3.6E-34 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 S40542_RS00745 3abb1ccdd24413bc9b5b03a86cc80677 85 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 3.0E-21 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 S40542_RS00745 3abb1ccdd24413bc9b5b03a86cc80677 85 SUPERFAMILY SSF118001 1 71 3.14E-28 T 11-11-2016 IPR010648 Uncharacterised protein family UPF0270 S40542_RS04495 0f94e37f70811de64ce2baf87f538515 370 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 350 8.8E-116 T 11-11-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 S40542_RS04495 0f94e37f70811de64ce2baf87f538515 370 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 350 1.0E-77 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 S40542_RS11785 3fe1eb4166aff05085b79c20ca9f7944 148 Pfam PF01475 Ferric uptake regulator family 10 130 2.2E-45 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 S40542_RS11785 3fe1eb4166aff05085b79c20ca9f7944 148 Gene3D G3DSA:1.10.10.10 5 82 1.6E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11785 3fe1eb4166aff05085b79c20ca9f7944 148 SUPERFAMILY SSF46785 8 133 6.85E-42 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS07450 447b24e5bced91eeabacf2870b096d61 253 Gene3D G3DSA:3.20.20.450 17 250 5.4E-40 T 11-11-2016 IPR001633 EAL domain S40542_RS07450 447b24e5bced91eeabacf2870b096d61 253 Pfam PF00563 EAL domain 19 246 3.7E-38 T 11-11-2016 IPR001633 EAL domain S40542_RS07450 447b24e5bced91eeabacf2870b096d61 253 SMART SM00052 12 251 7.7E-12 T 11-11-2016 IPR001633 EAL domain S40542_RS07450 447b24e5bced91eeabacf2870b096d61 253 SUPERFAMILY SSF141868 19 250 3.01E-47 T 11-11-2016 IPR001633 EAL domain S40542_RS13110 f7c70cbbb9395a8b9429c3f6c9e0165c 143 Pfam PF13737 Transposase DDE domain 16 127 2.1E-41 T 11-11-2016 IPR025668 Transposase DDE domain S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 113 7.3E-9 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 Pfam PF00361 Proton-conducting membrane transporter 126 401 2.1E-62 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 4.5E-39 T 11-11-2016 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 4.5E-39 T 11-11-2016 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 4.5E-39 T 11-11-2016 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 4.5E-39 T 11-11-2016 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 4.5E-39 T 11-11-2016 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 4.5E-39 T 11-11-2016 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 4.5E-39 T 11-11-2016 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 Pfam PF13244 Domain of unknown function (DUF4040) 609 674 3.3E-18 T 11-11-2016 IPR025383 Domain of unknown function DUF4040 S40542_RS06020 90cb7c3afb6848aa3cb0debef439f925 930 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 789 910 3.3E-35 T 11-11-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein S40542_RS17650 aab6fce4d3485cae2709109101667a08 267 Pfam PF13371 Tetratricopeptide repeat 189 256 2.9E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS17650 aab6fce4d3485cae2709109101667a08 267 Pfam PF13369 Transglutaminase-like superfamily 40 151 3.3E-9 T 11-11-2016 IPR032698 Protein SirB1, N-terminal S40542_RS12895 6105bd7a1894b789fd1f92da2ec38106 324 Gene3D G3DSA:2.120.10.30 179 283 1.9E-16 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS12895 6105bd7a1894b789fd1f92da2ec38106 324 Gene3D G3DSA:2.120.10.30 47 121 1.9E-16 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS12895 6105bd7a1894b789fd1f92da2ec38106 324 SUPERFAMILY SSF82171 49 283 1.41E-11 T 11-11-2016 S40542_RS12895 6105bd7a1894b789fd1f92da2ec38106 324 Pfam PF07676 WD40-like Beta Propeller Repeat 253 282 8.5E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12895 6105bd7a1894b789fd1f92da2ec38106 324 Pfam PF07676 WD40-like Beta Propeller Repeat 95 123 9.9E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12895 6105bd7a1894b789fd1f92da2ec38106 324 Pfam PF07676 WD40-like Beta Propeller Repeat 204 231 0.036 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12895 6105bd7a1894b789fd1f92da2ec38106 324 Pfam PF07676 WD40-like Beta Propeller Repeat 47 68 0.012 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS08460 2db3de25f90edfac5c2b8ec287505f98 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 S40542_RS08460 2db3de25f90edfac5c2b8ec287505f98 210 SUPERFAMILY SSF51161 23 206 6.65E-49 T 11-11-2016 IPR011004 Trimeric LpxA-like S40542_RS08460 2db3de25f90edfac5c2b8ec287505f98 210 Gene3D G3DSA:2.160.10.10 20 208 7.5E-54 T 11-11-2016 S40542_RS08460 2db3de25f90edfac5c2b8ec287505f98 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 149 1.1E-9 T 11-11-2016 IPR001451 Hexapeptide repeat S40542_RS10470 65903054a434f6536b140e655c3b7475 324 SMART SM00507 17 66 8.0E-4 T 11-11-2016 IPR003615 HNH nuclease S40542_RS20285 dce3c9eaab635ca9652df7168dd5825e 293 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 55 286 2.7E-38 T 11-11-2016 IPR005218 Diacylglycerol/lipid kinase S40542_RS20285 dce3c9eaab635ca9652df7168dd5825e 293 SUPERFAMILY SSF111331 2 287 8.72E-49 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain S40542_RS20285 dce3c9eaab635ca9652df7168dd5825e 293 SMART SM00046 1 131 0.0017 T 11-11-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 S40542_RS20285 dce3c9eaab635ca9652df7168dd5825e 293 Pfam PF00781 Diacylglycerol kinase catalytic domain 53 127 8.3E-17 T 11-11-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 S40542_RS12945 66f64626adc653c5ab9715343404b177 197 Gene3D G3DSA:2.60.120.10 1 163 1.8E-32 T 11-11-2016 IPR014710 RmlC-like jelly roll fold S40542_RS12945 66f64626adc653c5ab9715343404b177 197 SUPERFAMILY SSF51206 13 139 2.36E-16 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like S40542_RS13125 16e6ee5ad8fe1113fd28c531067198b7 256 Gene3D G3DSA:3.40.30.10 119 254 2.3E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS13125 16e6ee5ad8fe1113fd28c531067198b7 256 SUPERFAMILY SSF52833 110 252 4.49E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS13125 16e6ee5ad8fe1113fd28c531067198b7 256 Gene3D G3DSA:3.10.450.70 66 94 5.1E-4 T 11-11-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal S40542_RS13125 16e6ee5ad8fe1113fd28c531067198b7 256 Pfam PF13098 Thioredoxin-like domain 123 249 1.7E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS14070 8c5055b03dbfb19dac1a0ea51058e0a4 441 Pfam PF01609 Transposase DDE domain 130 350 2.3E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 S40542_RS14070 8c5055b03dbfb19dac1a0ea51058e0a4 441 Pfam PF13006 Insertion element 4 transposase N-terminal 17 106 1.8E-29 T 11-11-2016 IPR024473 Transposase, IS4, N-terminal S40542_RS14070 8c5055b03dbfb19dac1a0ea51058e0a4 441 SUPERFAMILY SSF53098 110 358 9.1E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS08975 8c5055b03dbfb19dac1a0ea51058e0a4 441 Pfam PF01609 Transposase DDE domain 130 350 2.3E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 S40542_RS08975 8c5055b03dbfb19dac1a0ea51058e0a4 441 Pfam PF13006 Insertion element 4 transposase N-terminal 17 106 1.8E-29 T 11-11-2016 IPR024473 Transposase, IS4, N-terminal S40542_RS08975 8c5055b03dbfb19dac1a0ea51058e0a4 441 SUPERFAMILY SSF53098 110 358 9.1E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS08135 4ec96e7bcf1dd66e5adabf30e9fde6c0 214 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 109 201 1.0E-21 T 11-11-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 S40542_RS08135 4ec96e7bcf1dd66e5adabf30e9fde6c0 214 SMART SM00702 20 201 1.1E-19 T 11-11-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 S40542_RS03455 1ea9edaf58d5afe820785ddf6639036a 101 SUPERFAMILY SSF143011 1 88 1.61E-5 T 11-11-2016 S40542_RS03455 1ea9edaf58d5afe820785ddf6639036a 101 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 1.3E-12 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family S40542_RS02905 41f85f5f26279e9c1e08a2a37e388fb6 309 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 5 303 4.9E-97 T 11-11-2016 IPR010293 Na+-dependent bicarbonate transporter superfamily S40542_RS09770 7a24973727163a0871c0695c16dd070d 393 SUPERFAMILY SSF101908 310 392 1.26E-5 T 11-11-2016 S40542_RS09770 7a24973727163a0871c0695c16dd070d 393 SUPERFAMILY SSF75011 365 392 1.44E-23 T 11-11-2016 S40542_RS09770 7a24973727163a0871c0695c16dd070d 393 SUPERFAMILY SSF75011 34 309 1.44E-23 T 11-11-2016 S40542_RS09770 7a24973727163a0871c0695c16dd070d 393 Gene3D G3DSA:2.120.10.30 44 182 5.3E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS09770 7a24973727163a0871c0695c16dd070d 393 Pfam PF10282 Lactonase, 7-bladed beta-propeller 169 392 9.7E-19 T 11-11-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 S40542_RS09770 7a24973727163a0871c0695c16dd070d 393 Gene3D G3DSA:2.130.10.10 183 392 7.2E-31 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS03735 1a595086eea07aea61d831f63ce729c3 288 Pfam PF00892 EamA-like transporter family 153 271 4.6E-9 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS03735 1a595086eea07aea61d831f63ce729c3 288 Pfam PF00892 EamA-like transporter family 17 137 3.3E-11 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS03735 1a595086eea07aea61d831f63ce729c3 288 SUPERFAMILY SSF103481 40 140 3.14E-9 T 11-11-2016 S40542_RS05595 d8ace916a2ebb15e2bc6caa974b6587d 78 SUPERFAMILY SSF47413 8 64 2.39E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS05595 d8ace916a2ebb15e2bc6caa974b6587d 78 Gene3D G3DSA:1.10.260.40 10 52 3.4E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS19610 e625cfaf25d4fb9348c639d329b82daf 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 224 1.9E-24 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 S40542_RS19610 e625cfaf25d4fb9348c639d329b82daf 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 305 325 1.9E-24 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 S40542_RS19610 e625cfaf25d4fb9348c639d329b82daf 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 137 153 1.9E-24 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 S40542_RS19610 e625cfaf25d4fb9348c639d329b82daf 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 160 179 1.9E-24 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 S40542_RS19610 e625cfaf25d4fb9348c639d329b82daf 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 115 132 1.9E-24 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 S40542_RS19610 e625cfaf25d4fb9348c639d329b82daf 336 SUPERFAMILY SSF56931 65 335 1.44E-91 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 S40542_RS19610 e625cfaf25d4fb9348c639d329b82daf 336 Pfam PF02253 Phospholipase A1 63 332 2.9E-99 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 S40542_RS19610 e625cfaf25d4fb9348c639d329b82daf 336 Gene3D G3DSA:2.40.230.10 63 334 4.3E-91 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 S40542_RS18990 2232beb186a789eb62201740a70806b2 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 256 1.4E-95 T 11-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria S40542_RS18990 2232beb186a789eb62201740a70806b2 258 Pfam PF02405 Permease MlaE 43 253 4.2E-75 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 S40542_RS07995 8a0b4d760944a54e4b170addbf8384f0 417 Pfam PF03222 Tryptophan/tyrosine permease family 31 387 1.7E-12 T 11-11-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 S40542_RS20270 1de1e6340a75101bfd14ffddd351654a 262 Pfam PF11101 Protein of unknown function (DUF2884) 31 256 9.4E-65 T 11-11-2016 IPR021307 Protein of unknown function DUF2884 S40542_RS03880 be776159080bfc07a2b41bb79ed2cadf 309 PIRSF PIRSF018266 4 306 1.0E-36 T 11-11-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component S40542_RS03880 be776159080bfc07a2b41bb79ed2cadf 309 Pfam PF16220 Domain of unknown function (DUF4880) 14 55 2.1E-10 T 11-11-2016 IPR032623 FecR, N-terminal S40542_RS08080 b2f8f6a7ae3aeb17c42da6fe72e25bae 64 Pfam PF08881 CVNH domain 10 59 2.1E-5 T 11-11-2016 IPR011058 Cyanovirin-N S40542_RS08080 b2f8f6a7ae3aeb17c42da6fe72e25bae 64 Gene3D G3DSA:2.30.60.10 8 60 2.0E-7 T 11-11-2016 IPR011058 Cyanovirin-N S40542_RS08080 b2f8f6a7ae3aeb17c42da6fe72e25bae 64 SUPERFAMILY SSF51322 8 61 1.44E-7 T 11-11-2016 IPR011058 Cyanovirin-N S40542_RS05560 4b18d333c49e49dbe13b9c1101b8bc48 267 Pfam PF13847 Methyltransferase domain 55 174 1.4E-19 T 11-11-2016 IPR025714 Methyltransferase domain S40542_RS05560 4b18d333c49e49dbe13b9c1101b8bc48 267 Gene3D G3DSA:3.40.50.150 53 216 8.1E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS05560 4b18d333c49e49dbe13b9c1101b8bc48 267 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 12 266 39.508 T 11-11-2016 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 S40542_RS05560 4b18d333c49e49dbe13b9c1101b8bc48 267 SUPERFAMILY SSF53335 44 254 5.02E-33 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS13760 843de6a46be3dda4c8c3b15b99179df5 238 SUPERFAMILY SSF51735 18 228 6.33E-6 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13760 843de6a46be3dda4c8c3b15b99179df5 238 Gene3D G3DSA:3.40.50.720 79 229 1.6E-6 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06825 2c20cc72c01162aca43b06c17955ca91 136 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 94 122 1.5E-10 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 S40542_RS06825 2c20cc72c01162aca43b06c17955ca91 136 SUPERFAMILY SSF109635 4 95 1.57E-23 T 11-11-2016 S40542_RS06825 2c20cc72c01162aca43b06c17955ca91 136 SUPERFAMILY SSF57716 96 133 4.28E-8 T 11-11-2016 S40542_RS03965 432e13a162945ebeeade10c64cfc8652 276 Pfam PF03783 Curli production assembly/transport component CsgG 44 256 4.0E-81 T 11-11-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 S40542_RS06030 9b023a951acc0bedb610606ff43d00b4 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 1.4E-15 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS06030 9b023a951acc0bedb610606ff43d00b4 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 1.4E-15 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS06030 9b023a951acc0bedb610606ff43d00b4 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 328 347 1.4E-15 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS06030 9b023a951acc0bedb610606ff43d00b4 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 1.4E-15 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS06030 9b023a951acc0bedb610606ff43d00b4 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 1.4E-15 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS06030 9b023a951acc0bedb610606ff43d00b4 503 Pfam PF00361 Proton-conducting membrane transporter 129 418 6.0E-40 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 S40542_RS15625 bb13882560fd77f3d09a8792d1aba991 201 PIRSF PIRSF016938 7 200 3.2E-22 T 11-11-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 S40542_RS15625 bb13882560fd77f3d09a8792d1aba991 201 SUPERFAMILY SSF89069 14 70 8.5E-7 T 11-11-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 S40542_RS15625 bb13882560fd77f3d09a8792d1aba991 201 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 18 86 2.9E-12 T 11-11-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 S40542_RS15625 bb13882560fd77f3d09a8792d1aba991 201 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 131 182 5.8E-11 T 11-11-2016 IPR005573 Anti sigma-E protein RseA, C-terminal S40542_RS15175 cd94af670c0afb68aa2e7d6f84b42983 213 Gene3D G3DSA:3.40.630.30 95 196 7.7E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15175 cd94af670c0afb68aa2e7d6f84b42983 213 SUPERFAMILY SSF55729 84 199 5.22E-7 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS11475 5f3fcb3410602d156e5d767a07b9d14f 415 Pfam PF03600 Citrate transporter 14 362 5.9E-33 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 S40542_RS10380 6a20b90542f7f24d1d37c345b5103685 166 Pfam PF08822 Protein of unknown function (DUF1804) 1 161 3.4E-51 T 11-11-2016 IPR014926 Bacteriophage D3112, Orf24 S40542_RS09740 9a948e00f903c74f89cc9b1d9cf65080 292 Gene3D G3DSA:3.40.50.720 3 221 4.7E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09740 9a948e00f903c74f89cc9b1d9cf65080 292 SUPERFAMILY SSF51735 6 264 3.19E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS09740 9a948e00f903c74f89cc9b1d9cf65080 292 Pfam PF13460 NAD(P)H-binding 10 150 2.1E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS14670 99324d1053f9c371fea06fb09f19c8b6 142 TIGRFAM TIGR02801 tolR: protein TolR 10 137 2.4E-40 T 11-11-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 S40542_RS14670 99324d1053f9c371fea06fb09f19c8b6 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 137 4.4E-25 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 S40542_RS08405 84e953eb4af2df31b5233e9ecb51eb13 348 SUPERFAMILY SSF74653 35 110 4.32E-21 T 11-11-2016 S40542_RS08405 84e953eb4af2df31b5233e9ecb51eb13 348 Gene3D G3DSA:3.30.1150.10 43 121 1.8E-13 T 11-11-2016 S40542_RS08405 84e953eb4af2df31b5233e9ecb51eb13 348 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 42 117 1.4E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS08405 84e953eb4af2df31b5233e9ecb51eb13 348 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 44 119 6.4E-16 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS11180 d5fd6170542382908d38b08d40ff565c 82 SUPERFAMILY SSF54593 12 75 5.39E-5 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS11180 d5fd6170542382908d38b08d40ff565c 82 Gene3D G3DSA:3.10.180.10 12 75 8.5E-7 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS19060 1545d2ea7f073f37ef86cfcc3439e665 449 SUPERFAMILY SSF111283 17 449 7.72E-122 T 11-11-2016 S40542_RS19060 1545d2ea7f073f37ef86cfcc3439e665 449 Pfam PF01523 Putative modulator of DNA gyrase 35 326 5.4E-50 T 11-11-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 SUPERFAMILY SSF88723 9 70 2.43E-17 T 11-11-2016 IPR029060 PIN domain-like S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 SUPERFAMILY SSF88723 112 168 2.43E-17 T 11-11-2016 IPR029060 PIN domain-like S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 Gene3D G3DSA:3.40.50.1010 11 69 1.7E-14 T 11-11-2016 IPR029060 PIN domain-like S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 Gene3D G3DSA:3.40.50.1010 112 158 1.7E-14 T 11-11-2016 IPR029060 PIN domain-like S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 Gene3D G3DSA:3.40.50.300 254 464 1.0E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 Pfam PF13638 PIN domain 11 158 1.3E-35 T 11-11-2016 IPR002716 PIN domain S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 Pfam PF02562 PhoH-like protein 256 460 7.7E-53 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 SUPERFAMILY SSF52540 165 218 4.13E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 SUPERFAMILY SSF52540 255 445 4.13E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02500 a0b0e4fbcbc2559b980b162d582a0c16 466 SMART SM00670 9 149 4.4E-7 T 11-11-2016 IPR002716 PIN domain S40542_RS01395 033839154fdd8066ed8f1f16824feb8e 65 Pfam PF11174 Protein of unknown function (DUF2970) 4 59 5.3E-21 T 11-11-2016 IPR021344 Protein of unknown function DUF2970 S40542_RS02175 db26a38a014caf21c0d97498c29848b2 157 Gene3D G3DSA:3.30.70.330 61 151 7.6E-28 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 S40542_RS02175 db26a38a014caf21c0d97498c29848b2 157 SMART SM00360 70 142 9.6E-22 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 S40542_RS02175 db26a38a014caf21c0d97498c29848b2 157 SUPERFAMILY SSF54928 62 149 5.37E-27 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 S40542_RS02175 db26a38a014caf21c0d97498c29848b2 157 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 140 4.4E-20 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 S40542_RS09040 8ab930994451072252c47e84fb09ecf6 489 Pfam PF00929 Exonuclease 21 201 2.2E-24 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III S40542_RS09040 8ab930994451072252c47e84fb09ecf6 489 Pfam PF08411 Exonuclease C-terminal 220 487 6.6E-102 T 11-11-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 S40542_RS09040 8ab930994451072252c47e84fb09ecf6 489 Gene3D G3DSA:3.30.420.10 16 209 1.6E-81 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS09040 8ab930994451072252c47e84fb09ecf6 489 SUPERFAMILY SSF53098 18 489 9.83E-136 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 S40542_RS09040 8ab930994451072252c47e84fb09ecf6 489 PIRSF PIRSF000977 11 489 4.1E-204 T 11-11-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 S40542_RS01145 cff16fb7e368f3047c10ff43619e85de 353 Gene3D G3DSA:1.10.287.70 25 110 2.3E-11 T 11-11-2016 S40542_RS01145 cff16fb7e368f3047c10ff43619e85de 353 Pfam PF07885 Ion channel 29 103 3.6E-11 T 11-11-2016 IPR013099 Potassium channel domain S40542_RS01145 cff16fb7e368f3047c10ff43619e85de 353 SUPERFAMILY SSF81324 18 133 1.7E-15 T 11-11-2016 S40542_RS01145 cff16fb7e368f3047c10ff43619e85de 353 Gene3D G3DSA:3.40.50.720 116 241 7.1E-10 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS16470 40229202e7c27e75258be4660d751cf6 299 PIRSF PIRSF020481 4 298 4.7E-84 T 11-11-2016 IPR014507 Baseplate assembly protein J, predicted S40542_RS16470 40229202e7c27e75258be4660d751cf6 299 Pfam PF04865 Baseplate J-like protein 104 254 1.6E-20 T 11-11-2016 IPR006949 Baseplate protein J-like S40542_RS00700 769b5dfad9363e4ad72f388543f4bd69 206 Pfam PF08761 dUTPase 8 160 9.6E-42 T 11-11-2016 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 S40542_RS00700 769b5dfad9363e4ad72f388543f4bd69 206 SUPERFAMILY SSF101386 5 205 3.01E-60 T 11-11-2016 S40542_RS12710 12a8b26faadcf71d713b55727fe61175 381 Gene3D G3DSA:1.25.40.10 300 363 2.1E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12710 12a8b26faadcf71d713b55727fe61175 381 SUPERFAMILY SSF53474 21 256 8.37E-52 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS12710 12a8b26faadcf71d713b55727fe61175 381 Gene3D G3DSA:3.40.50.1820 27 257 9.7E-63 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS12710 12a8b26faadcf71d713b55727fe61175 381 Pfam PF00756 Putative esterase 33 221 3.8E-25 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS12710 12a8b26faadcf71d713b55727fe61175 381 SUPERFAMILY SSF48452 294 361 1.83E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS10240 c563ae99b058ceafcc89ec5bc734cf90 540 Pfam PF03929 PepSY-associated TM region 13 377 5.6E-51 T 11-11-2016 IPR005625 PepSY-associated TM protein S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 11-11-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 2.3E-64 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 6.2E-131 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 SUPERFAMILY SSF53901 15 294 2.88E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 PIRSF PIRSF000429 9 436 2.6E-125 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 66.428 T 11-11-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 Gene3D G3DSA:3.40.47.10 304 434 2.6E-48 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 Gene3D G3DSA:3.40.47.10 175 220 2.6E-48 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 11-11-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 Gene3D G3DSA:3.40.47.10 221 300 1.1E-55 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 Gene3D G3DSA:3.40.47.10 15 134 1.1E-55 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 11-11-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 SUPERFAMILY SSF53901 297 434 1.11E-31 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 8 435 2.5E-246 T 11-11-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 S40542_RS08820 3c3ce0a828829f7c2cea5ef579b68e8a 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 2.0E-36 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 376 536 1.4E-19 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 Pfam PF00326 Prolyl oligopeptidase family 632 827 2.7E-40 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 Gene3D G3DSA:3.40.50.1820 571 827 3.0E-62 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 SUPERFAMILY SSF82171 374 562 1.7E-36 T 11-11-2016 S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 SUPERFAMILY SSF82171 49 184 1.7E-36 T 11-11-2016 S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 SUPERFAMILY SSF82171 244 333 1.7E-36 T 11-11-2016 S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 SUPERFAMILY SSF53474 576 827 5.35E-55 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 Gene3D G3DSA:2.140.10.30 49 215 2.9E-35 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 Gene3D G3DSA:2.140.10.30 259 341 2.9E-35 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 S40542_RS10275 25b90ea6e53e349b928391b645391e57 827 Gene3D G3DSA:2.140.10.30 376 556 2.9E-35 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 S40542_RS09505 13c7c33073d8517c73186d3e8d0cc8b8 89 Pfam PF06305 Protein of unknown function (DUF1049) 23 83 8.7E-14 T 11-11-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 S40542_RS00280 d7904c6af3074c795cb61986cd3e50b3 716 Gene3D G3DSA:2.170.130.10 36 168 2.7E-24 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS00280 d7904c6af3074c795cb61986cd3e50b3 716 Pfam PF00593 TonB dependent receptor 454 714 2.4E-16 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS00280 d7904c6af3074c795cb61986cd3e50b3 716 Gene3D G3DSA:2.40.170.20 307 716 6.9E-48 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS00280 d7904c6af3074c795cb61986cd3e50b3 716 Gene3D G3DSA:2.40.170.20 169 266 6.9E-48 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS00280 d7904c6af3074c795cb61986cd3e50b3 716 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 165 4.3E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS00280 d7904c6af3074c795cb61986cd3e50b3 716 SUPERFAMILY SSF56935 36 716 6.01E-69 T 11-11-2016 S40542_RS03920 532ad776684a362e737d4eb761fd5f29 94 Gene3D G3DSA:3.40.190.10 1 61 4.4E-15 T 11-11-2016 S40542_RS03920 532ad776684a362e737d4eb761fd5f29 94 SUPERFAMILY SSF53850 1 90 9.41E-12 T 11-11-2016 S40542_RS20455 1445278b2d4cabdc715b2e025e508e84 208 Pfam PF01618 MotA/TolQ/ExbB proton channel family 87 190 7.0E-35 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 S40542_RS20455 1445278b2d4cabdc715b2e025e508e84 208 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 1 201 8.4E-72 T 11-11-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 S40542_RS11905 9321b9b4daa9f18459673a6d328b691f 268 SUPERFAMILY SSF52096 12 226 4.98E-25 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS11905 9321b9b4daa9f18459673a6d328b691f 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 52 196 3.4E-14 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 S40542_RS11905 9321b9b4daa9f18459673a6d328b691f 268 Gene3D G3DSA:3.90.226.10 31 213 3.8E-21 T 11-11-2016 IPR029045 ClpP/crotonase-like domain S40542_RS03480 6448b8e7bfe4e60855d4a961491de5e8 552 Pfam PF13175 AAA ATPase domain 157 335 2.5E-17 T 11-11-2016 S40542_RS03480 6448b8e7bfe4e60855d4a961491de5e8 552 Pfam PF13175 AAA ATPase domain 1 50 8.8E-10 T 11-11-2016 S40542_RS03480 6448b8e7bfe4e60855d4a961491de5e8 552 Gene3D G3DSA:3.40.50.300 1 355 1.3E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS03480 6448b8e7bfe4e60855d4a961491de5e8 552 SUPERFAMILY SSF52540 1 348 1.47E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15935 08fd775e43edea2351ec389e03984d30 330 Gene3D G3DSA:3.30.565.10 190 315 5.5E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS15935 08fd775e43edea2351ec389e03984d30 330 Pfam PF06580 Histidine kinase 135 212 4.6E-20 T 11-11-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 S40542_RS15935 08fd775e43edea2351ec389e03984d30 330 SUPERFAMILY SSF55874 206 319 1.18E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06890 e6422d55086f6d1a99ca6c2a35873bf1 375 Pfam PF08713 DNA alkylation repair enzyme 132 223 6.2E-5 T 11-11-2016 IPR014825 DNA alkylation repair enzyme S40542_RS06890 e6422d55086f6d1a99ca6c2a35873bf1 375 Gene3D G3DSA:1.25.10.10 126 224 5.7E-6 T 11-11-2016 IPR011989 Armadillo-like helical S40542_RS06890 e6422d55086f6d1a99ca6c2a35873bf1 375 SUPERFAMILY SSF48371 25 250 1.44E-45 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 S40542_RS04995 e0f93fdedabb18b2dc5191d3ebbc2a4a 248 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 245 32.82 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 S40542_RS04995 e0f93fdedabb18b2dc5191d3ebbc2a4a 248 Pfam PF04205 FMN-binding domain 143 228 3.8E-14 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 S40542_RS04995 e0f93fdedabb18b2dc5191d3ebbc2a4a 248 SMART SM00900 143 233 2.1E-24 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 S40542_RS04995 e0f93fdedabb18b2dc5191d3ebbc2a4a 248 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 241 7.2E-67 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 S40542_RS04995 e0f93fdedabb18b2dc5191d3ebbc2a4a 248 PIRSF PIRSF009437 1 248 9.2E-79 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 S40542_RS02825 1ae02830e7630450bbc77df17f6c35b1 505 Pfam PF04397 LytTr DNA-binding domain 410 500 2.1E-18 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS02825 1ae02830e7630450bbc77df17f6c35b1 505 SMART SM00850 405 501 7.4E-23 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS02825 1ae02830e7630450bbc77df17f6c35b1 505 Gene3D G3DSA:2.40.50.40 398 464 4.3E-15 T 11-11-2016 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 SUPERFAMILY SSF51905 2 178 6.12E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 SUPERFAMILY SSF51905 285 389 6.12E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 5.5E-20 T 11-11-2016 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 313 5.5E-20 T 11-11-2016 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 5.5E-20 T 11-11-2016 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 329 5.5E-20 T 11-11-2016 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 Gene3D G3DSA:3.50.50.60 2 69 1.5E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 Gene3D G3DSA:3.50.50.60 285 368 1.5E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 Gene3D G3DSA:3.50.50.60 102 183 1.5E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07935 c79e0a17bc6c0c9ba3cbcf3126276379 429 Pfam PF01494 FAD binding domain 4 330 1.7E-19 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 S40542_RS08960 b92922b8fe9a0cac3e1994b375d0cb37 516 SUPERFAMILY SSF52172 4 125 1.57E-9 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08960 b92922b8fe9a0cac3e1994b375d0cb37 516 Gene3D G3DSA:3.40.50.2300 5 125 4.2E-10 T 11-11-2016 S40542_RS08960 b92922b8fe9a0cac3e1994b375d0cb37 516 Pfam PF00072 Response regulator receiver domain 8 95 4.7E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS10100 9302c26610131db6628bcce2bca8d2c4 126 Pfam PF04237 YjbR 12 109 9.6E-26 T 11-11-2016 IPR007351 Uncharacterised protein YjbR S40542_RS10100 9302c26610131db6628bcce2bca8d2c4 126 SUPERFAMILY SSF142906 6 122 2.75E-36 T 11-11-2016 S40542_RS04650 cc7fcf5df20c801108a533956dd7065d 187 Pfam PF00156 Phosphoribosyl transferase domain 11 162 1.3E-12 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 S40542_RS04650 cc7fcf5df20c801108a533956dd7065d 187 Gene3D G3DSA:3.40.50.2020 2 164 8.4E-33 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS04650 cc7fcf5df20c801108a533956dd7065d 187 SUPERFAMILY SSF53271 3 162 4.59E-31 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like S40542_RS05835 d8f864660b404394ef465ec00f33ab62 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 34.802 T 11-11-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 S40542_RS05835 d8f864660b404394ef465ec00f33ab62 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 7.0E-59 T 11-11-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 S40542_RS05835 d8f864660b404394ef465ec00f33ab62 152 SUPERFAMILY SSF52335 4 147 6.8E-54 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS05835 d8f864660b404394ef465ec00f33ab62 152 PIRSF PIRSF006614 8 151 1.5E-62 T 11-11-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 S40542_RS05835 d8f864660b404394ef465ec00f33ab62 152 Gene3D G3DSA:3.40.50.1380 2 150 1.2E-62 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS05835 d8f864660b404394ef465ec00f33ab62 152 Pfam PF02142 MGS-like domain 26 117 3.3E-17 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS05835 d8f864660b404394ef465ec00f33ab62 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 11-11-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 S40542_RS05835 d8f864660b404394ef465ec00f33ab62 152 SMART SM00851 25 118 9.5E-20 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain S40542_RS16420 5150c1397cd5b5a5d12ba42f05f3391b 111 Pfam PF04965 Gene 25-like lysozyme 16 101 1.8E-17 T 11-11-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD S40542_RS16420 5150c1397cd5b5a5d12ba42f05f3391b 111 Gene3D G3DSA:3.10.450.40 6 108 1.4E-33 T 11-11-2016 S40542_RS16420 5150c1397cd5b5a5d12ba42f05f3391b 111 SUPERFAMILY SSF160719 9 105 5.23E-28 T 11-11-2016 S40542_RS10750 fe9b546745790a75c5ccb8f146d40f94 344 PIRSF PIRSF039012 2 321 1.0E-78 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 S40542_RS10750 fe9b546745790a75c5ccb8f146d40f94 344 Gene3D G3DSA:2.40.50.100 243 308 3.3E-4 T 11-11-2016 S40542_RS10750 fe9b546745790a75c5ccb8f146d40f94 344 Gene3D G3DSA:3.40.630.10 29 226 6.6E-25 T 11-11-2016 S40542_RS10750 fe9b546745790a75c5ccb8f146d40f94 344 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 313 3.8E-58 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 S40542_RS10750 fe9b546745790a75c5ccb8f146d40f94 344 SUPERFAMILY SSF53187 15 314 8.27E-72 T 11-11-2016 S40542_RS10705 860d5b382cb6c0b13104049bf55f939a 155 SUPERFAMILY SSF54427 20 151 2.3E-18 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS10705 860d5b382cb6c0b13104049bf55f939a 155 Pfam PF13577 SnoaL-like domain 27 145 1.6E-11 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain S40542_RS10705 860d5b382cb6c0b13104049bf55f939a 155 Gene3D G3DSA:3.10.450.50 29 149 4.0E-14 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS03050 9f0c680bf69f56b96876631b53f8c712 252 SUPERFAMILY SSF56925 77 113 1.02E-7 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS03050 9f0c680bf69f56b96876631b53f8c712 252 SUPERFAMILY SSF56925 145 252 1.02E-7 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS03050 9f0c680bf69f56b96876631b53f8c712 252 Gene3D G3DSA:2.40.160.20 77 110 2.9E-7 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS03050 9f0c680bf69f56b96876631b53f8c712 252 Gene3D G3DSA:2.40.160.20 142 252 2.9E-7 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS07785 34b3db77affe4c7d57bdc79810a5b823 804 Pfam PF02687 FtsX-like permease family 678 796 1.6E-12 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS16290 9cfd1b2e81366fa88c2a47835c9158a0 230 SUPERFAMILY SSF52540 50 158 1.33E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16290 9cfd1b2e81366fa88c2a47835c9158a0 230 Gene3D G3DSA:3.40.50.300 55 158 1.4E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16290 9cfd1b2e81366fa88c2a47835c9158a0 230 PIRSF PIRSF037290 1 223 1.7E-52 T 11-11-2016 IPR017166 Uncharacterised conserved protein UCP037290 S40542_RS10180 8b7c8e13994da200fc0516882d53f9fa 157 Pfam PF08534 Redoxin 4 152 1.0E-38 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 S40542_RS10180 8b7c8e13994da200fc0516882d53f9fa 157 SUPERFAMILY SSF52833 2 156 5.84E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS10180 8b7c8e13994da200fc0516882d53f9fa 157 Gene3D G3DSA:3.40.30.10 1 157 1.4E-60 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS08545 3e81ad2ac584f3cbbe0757181c47f06e 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 90 4.5E-13 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS08545 3e81ad2ac584f3cbbe0757181c47f06e 106 PRINTS PR00355 Adrenodoxin signature 82 90 1.8E-6 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 S40542_RS08545 3e81ad2ac584f3cbbe0757181c47f06e 106 PRINTS PR00355 Adrenodoxin signature 40 50 1.8E-6 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 S40542_RS08545 3e81ad2ac584f3cbbe0757181c47f06e 106 PRINTS PR00355 Adrenodoxin signature 59 73 1.8E-6 T 11-11-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 S40542_RS08545 3e81ad2ac584f3cbbe0757181c47f06e 106 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 11-11-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 S40542_RS08545 3e81ad2ac584f3cbbe0757181c47f06e 106 SUPERFAMILY SSF54292 4 104 1.76E-27 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 S40542_RS08545 3e81ad2ac584f3cbbe0757181c47f06e 106 Gene3D G3DSA:3.10.20.30 3 104 3.5E-32 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS19115 9591dc0106eba09815ab05d2da1873aa 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 286 8.1E-18 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS19115 9591dc0106eba09815ab05d2da1873aa 300 PIRSF PIRSF006278 2 298 9.9E-72 T 11-11-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase S40542_RS19115 9591dc0106eba09815ab05d2da1873aa 300 SUPERFAMILY SSF53686 6 296 8.35E-56 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme S40542_RS19115 9591dc0106eba09815ab05d2da1873aa 300 Gene3D G3DSA:3.40.50.1100 97 296 1.3E-51 T 11-11-2016 S40542_RS12430 2739ee45d8000634adb89b4a9d60b159 424 Gene3D G3DSA:3.60.21.10 23 42 6.6E-51 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12430 2739ee45d8000634adb89b4a9d60b159 424 Gene3D G3DSA:3.60.21.10 89 404 6.6E-51 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12430 2739ee45d8000634adb89b4a9d60b159 424 SUPERFAMILY SSF56300 255 393 2.4E-35 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12430 2739ee45d8000634adb89b4a9d60b159 424 SUPERFAMILY SSF56300 27 41 2.4E-35 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12430 2739ee45d8000634adb89b4a9d60b159 424 SUPERFAMILY SSF56300 93 220 2.4E-35 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like S40542_RS12430 2739ee45d8000634adb89b4a9d60b159 424 Pfam PF00149 Calcineurin-like phosphoesterase 114 323 1.0E-8 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 S40542_RS12285 64340de0b85822ac67b08ebdc5b81941 271 Gene3D G3DSA:1.25.40.10 26 256 1.5E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12285 64340de0b85822ac67b08ebdc5b81941 271 SUPERFAMILY SSF48452 33 177 5.52E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07825 f3ab5a8747ce5b8c81fbe16d81c5152a 142 Gene3D G3DSA:3.40.50.2300 2 137 5.8E-23 T 11-11-2016 S40542_RS07825 f3ab5a8747ce5b8c81fbe16d81c5152a 142 SUPERFAMILY SSF52172 1 136 4.55E-19 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07825 f3ab5a8747ce5b8c81fbe16d81c5152a 142 Pfam PF00072 Response regulator receiver domain 6 133 1.6E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07825 f3ab5a8747ce5b8c81fbe16d81c5152a 142 SMART SM00448 4 136 9.2E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS15190 ac6930c40a1a03185d77bb959c50bb33 532 Pfam PF03929 PepSY-associated TM region 11 376 3.6E-53 T 11-11-2016 IPR005625 PepSY-associated TM protein S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 Gene3D G3DSA:2.120.10.30 159 234 9.4E-21 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 Gene3D G3DSA:2.120.10.30 284 408 9.4E-21 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 Gene3D G3DSA:2.120.10.30 630 674 9.1E-18 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 Gene3D G3DSA:2.120.10.30 409 586 9.1E-18 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 SUPERFAMILY SSF46894 4 96 1.05E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 Gene3D G3DSA:1.10.10.10 4 99 1.5E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 SMART SM00862 21 96 1.3E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 Pfam PF07676 WD40-like Beta Propeller Repeat 162 185 0.045 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 SUPERFAMILY SSF75011 283 557 2.62E-21 T 11-11-2016 S40542_RS10140 b882968f04c91ec1bc60be6d568e9f13 681 Pfam PF00486 Transcriptional regulatory protein, C terminal 22 96 1.6E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS17260 ace3ea70508ed20dabc29873219d766d 573 Gene3D G3DSA:2.40.160.50 387 561 1.3E-16 T 11-11-2016 S40542_RS17260 ace3ea70508ed20dabc29873219d766d 573 Pfam PF07244 Surface antigen variable number repeat 107 162 8.2E-6 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 S40542_RS17260 ace3ea70508ed20dabc29873219d766d 573 Pfam PF01103 Surface antigen 263 561 9.7E-27 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 S40542_RS16870 362128d640f148126d667be025cd0b36 637 Pfam PF13624 SurA N-terminal domain 1 165 1.6E-46 T 11-11-2016 S40542_RS16870 362128d640f148126d667be025cd0b36 637 Pfam PF13616 PPIC-type PPIASE domain 261 366 7.4E-29 T 11-11-2016 S40542_RS16870 362128d640f148126d667be025cd0b36 637 Gene3D G3DSA:3.10.50.40 261 389 8.6E-40 T 11-11-2016 S40542_RS16870 362128d640f148126d667be025cd0b36 637 SUPERFAMILY SSF54534 261 366 2.55E-29 T 11-11-2016 S40542_RS16870 362128d640f148126d667be025cd0b36 637 SUPERFAMILY SSF109998 203 241 1.57E-32 T 11-11-2016 IPR027304 Trigger factor/SurA domain S40542_RS16870 362128d640f148126d667be025cd0b36 637 SUPERFAMILY SSF109998 40 169 1.57E-32 T 11-11-2016 IPR027304 Trigger factor/SurA domain S40542_RS06900 1db9a508262b067187e8e4c3f7669e3e 120 SUPERFAMILY SSF54593 2 118 3.99E-17 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS06900 1db9a508262b067187e8e4c3f7669e3e 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 116 2.0E-4 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS06900 1db9a508262b067187e8e4c3f7669e3e 120 Gene3D G3DSA:3.10.180.10 2 116 1.1E-16 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS10535 d287d08fbe242b8c9d209e7d5dfb7cb1 115 Pfam PF08809 Phage related hypothetical protein (DUF1799) 30 95 8.2E-6 T 11-11-2016 IPR014915 Bacteriophage TLS, TfmB S40542_RS08945 8a460615a533ce02b0703c4d6223ffb5 466 SUPERFAMILY SSF69318 105 319 6.41E-21 T 11-11-2016 S40542_RS08945 8a460615a533ce02b0703c4d6223ffb5 466 Gene3D G3DSA:2.130.10.130 371 447 1.1E-5 T 11-11-2016 S40542_RS08945 8a460615a533ce02b0703c4d6223ffb5 466 Gene3D G3DSA:2.130.10.130 116 317 9.8E-19 T 11-11-2016 S40542_RS08945 8a460615a533ce02b0703c4d6223ffb5 466 SUPERFAMILY SSF69318 375 447 5.36E-9 T 11-11-2016 S40542_RS08945 8a460615a533ce02b0703c4d6223ffb5 466 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 238 315 1.3E-6 T 11-11-2016 S40542_RS08945 8a460615a533ce02b0703c4d6223ffb5 466 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 126 197 1.5E-6 T 11-11-2016 S40542_RS14090 00ead3214821dd1da42e2169b5668b56 408 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 10 387 1.3E-55 T 11-11-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 S40542_RS02930 d005932e61bc9f8107e4352afa2e2944 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 130 5.3E-22 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 S40542_RS17970 65d359501edee0c62589427443e92db3 111 PIRSF PIRSF018193 1 111 6.8E-42 T 11-11-2016 IPR016716 Regulator of ribonuclease activity B S40542_RS17970 65d359501edee0c62589427443e92db3 111 SUPERFAMILY SSF89946 1 111 1.57E-36 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain S40542_RS17970 65d359501edee0c62589427443e92db3 111 Pfam PF06877 Regulator of ribonuclease activity B 6 107 2.6E-29 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain S40542_RS17970 65d359501edee0c62589427443e92db3 111 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 1 111 27.611 T 11-11-2016 IPR016716 Regulator of ribonuclease activity B S40542_RS17970 65d359501edee0c62589427443e92db3 111 Gene3D G3DSA:3.30.70.970 2 111 1.5E-40 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain S40542_RS12365 0532c6c2cb4ea57f083dc8db97ed5332 394 Pfam PF01180 Dihydroorotate dehydrogenase 63 357 1.4E-65 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 S40542_RS12365 0532c6c2cb4ea57f083dc8db97ed5332 394 SUPERFAMILY SSF51395 14 372 1.7E-68 T 11-11-2016 S40542_RS12365 0532c6c2cb4ea57f083dc8db97ed5332 394 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 16 371 3.6E-86 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 S40542_RS12365 0532c6c2cb4ea57f083dc8db97ed5332 394 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 309 329 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 S40542_RS12365 0532c6c2cb4ea57f083dc8db97ed5332 394 Gene3D G3DSA:3.20.20.70 12 372 9.6E-91 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS18975 aa0c2a2673a3ade1579b53c88924dd87 97 SUPERFAMILY SSF52091 14 96 7.06E-12 T 11-11-2016 IPR002645 STAS domain S40542_RS18975 aa0c2a2673a3ade1579b53c88924dd87 97 Gene3D G3DSA:3.30.750.24 15 97 3.3E-10 T 11-11-2016 IPR002645 STAS domain S40542_RS18975 aa0c2a2673a3ade1579b53c88924dd87 97 Pfam PF13466 STAS domain 14 89 5.6E-10 T 11-11-2016 IPR002645 STAS domain S40542_RS12115 dda9e62a6e0106b1eec1accfb75c73ba 148 Pfam PF04217 Protein of unknown function, DUF412 6 144 2.7E-49 T 11-11-2016 IPR007334 Uncharacterised protein family UPF0208 S40542_RS09990 90f1fa6e62db82171fb8e79a7e2cf7a0 275 PIRSF PIRSF012524 1 275 1.2E-71 T 11-11-2016 IPR014464 Conserved virulence factor B S40542_RS09990 90f1fa6e62db82171fb8e79a7e2cf7a0 275 Pfam PF13509 S1 domain 2 62 3.3E-14 T 11-11-2016 S40542_RS23395 98f7bbfb176faec9a220bc4cdbb19848 254 Pfam PF01757 Acyltransferase family 30 253 3.0E-18 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 S40542_RS04775 56921286821dc450988540ca73d40694 287 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 6 287 28.889 T 11-11-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 S40542_RS04775 56921286821dc450988540ca73d40694 287 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 286 5.0E-107 T 11-11-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 S40542_RS04775 56921286821dc450988540ca73d40694 287 Pfam PF01040 UbiA prenyltransferase family 29 271 3.7E-65 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 S40542_RS08755 50ba9abef4217cc303f17de9dece66e7 98 Gene3D G3DSA:2.40.10.220 3 81 1.2E-7 T 11-11-2016 S40542_RS08755 50ba9abef4217cc303f17de9dece66e7 98 Pfam PF07238 PilZ domain 6 95 1.1E-16 T 11-11-2016 IPR009875 PilZ domain GO:0035438 S40542_RS08755 50ba9abef4217cc303f17de9dece66e7 98 SUPERFAMILY SSF141371 3 93 2.35E-12 T 11-11-2016 S40542_RS02595 6e4902e2457fa6f88818c7b816863e10 331 Pfam PF00487 Fatty acid desaturase 62 315 7.1E-21 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 S40542_RS19350 82be7c4d0b657b45da3fb0ec953f23a1 287 Gene3D G3DSA:2.120.10.30 202 254 3.7E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS19350 82be7c4d0b657b45da3fb0ec953f23a1 287 Gene3D G3DSA:2.120.10.30 36 161 3.7E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS19350 82be7c4d0b657b45da3fb0ec953f23a1 287 SUPERFAMILY SSF69304 37 258 1.18E-11 T 11-11-2016 S40542_RS01795 571b3d03bb65a4a700c2241d2522ce51 322 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 36 315 2.1E-41 T 11-11-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 S40542_RS01795 571b3d03bb65a4a700c2241d2522ce51 322 SUPERFAMILY SSF51197 27 316 1.65E-78 T 11-11-2016 S40542_RS01795 571b3d03bb65a4a700c2241d2522ce51 322 Gene3D G3DSA:3.60.130.10 9 317 1.1E-59 T 11-11-2016 S40542_RS11880 b238f2237b65e7862b43b2164763ae27 153 Pfam PF06841 T4-like virus tail tube protein gp19 12 142 3.6E-11 T 11-11-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 S40542_RS18250 205a4c8706e1ce422a40d2499d584106 164 SUPERFAMILY SSF54534 2 142 1.0E-30 T 11-11-2016 S40542_RS18250 205a4c8706e1ce422a40d2499d584106 164 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 139 4.0E-11 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 S40542_RS18250 205a4c8706e1ce422a40d2499d584106 164 Gene3D G3DSA:3.10.50.40 2 79 8.1E-18 T 11-11-2016 S40542_RS18250 205a4c8706e1ce422a40d2499d584106 164 Gene3D G3DSA:3.10.50.40 128 142 8.1E-18 T 11-11-2016 S40542_RS07760 cf7af2bba70ec456b3fe89c169f2e2ca 225 SUPERFAMILY SSF53335 6 199 2.48E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS07760 cf7af2bba70ec456b3fe89c169f2e2ca 225 Gene3D G3DSA:3.40.50.150 6 197 5.4E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS07760 cf7af2bba70ec456b3fe89c169f2e2ca 225 Pfam PF01564 Spermine/spermidine synthase 35 197 7.4E-10 T 11-11-2016 S40542_RS08905 08890dc85ad320854eb49170df644b09 127 SUPERFAMILY SSF54427 7 125 3.01E-11 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS08905 08890dc85ad320854eb49170df644b09 127 Gene3D G3DSA:3.10.450.50 5 125 6.1E-10 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS00815 66d017170bc834e5a8afe2a95dc8aa32 306 Pfam PF01553 Acyltransferase 72 193 1.4E-13 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS00815 66d017170bc834e5a8afe2a95dc8aa32 306 SMART SM00563 85 228 2.1E-11 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS00815 66d017170bc834e5a8afe2a95dc8aa32 306 SUPERFAMILY SSF69593 20 207 2.75E-26 T 11-11-2016 S40542_RS08780 6d4261a90626617e0e4c7b0c9fad9f79 242 Pfam PF11859 Protein of unknown function (DUF3379) 1 238 1.2E-60 T 11-11-2016 IPR021806 Protein of unknown function DUF3379 S40542_RS11980 aee8c62ea93605a8afde859ed67ae071 684 Pfam PF13884 Chaperone of endosialidase 589 640 1.9E-14 T 11-11-2016 IPR030392 Intramolecular chaperone auto-processing domain S40542_RS10360 ce49ea4a3d05d865c4974a0da5dc973c 380 Pfam PF04233 Phage Mu protein F like protein 59 172 2.0E-19 T 11-11-2016 IPR006528 Phage head morphogenesis domain S40542_RS07305 c5d583a727950e85811d5e36558e5b1b 452 Pfam PF12040 Domain of unknown function (DUF3526) 275 415 4.5E-26 T 11-11-2016 IPR021913 Protein of unknown function DUF3526 S40542_RS04985 d51f992c8b83dfc56e73dd340bd33bf6 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 2.3E-116 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 S40542_RS04985 d51f992c8b83dfc56e73dd340bd33bf6 447 Pfam PF11973 NQRA C-terminal domain 262 310 8.8E-21 T 11-11-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 S40542_RS04985 d51f992c8b83dfc56e73dd340bd33bf6 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 47.12 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 S40542_RS04985 d51f992c8b83dfc56e73dd340bd33bf6 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 2.3E-189 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 S40542_RS04985 d51f992c8b83dfc56e73dd340bd33bf6 447 Gene3D G3DSA:2.40.50.100 43 80 9.6E-4 T 11-11-2016 S40542_RS03770 9018873640844ade8343424c57a630f3 148 SUPERFAMILY SSF55729 3 147 3.97E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS03770 9018873640844ade8343424c57a630f3 148 Gene3D G3DSA:3.40.630.30 1 143 4.4E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS03770 9018873640844ade8343424c57a630f3 148 Pfam PF00583 Acetyltransferase (GNAT) family 54 134 2.2E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS04690 274b26ae4b6c2fa88ecfdb072280ba1e 851 Pfam PF11739 Dicarboxylate transport 650 845 2.1E-50 T 11-11-2016 IPR021730 Dicarboxylate transport S40542_RS00210 05899e941d22a4e7240c82e675c5db21 280 SMART SM00850 182 278 4.4E-18 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS00210 05899e941d22a4e7240c82e675c5db21 280 Pfam PF04397 LytTr DNA-binding domain 191 277 3.3E-13 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 S40542_RS00210 05899e941d22a4e7240c82e675c5db21 280 Gene3D G3DSA:2.40.50.40 191 241 8.2E-5 T 11-11-2016 S40542_RS00210 05899e941d22a4e7240c82e675c5db21 280 Gene3D G3DSA:2.20.25.10 252 279 6.3E-6 T 11-11-2016 S40542_RS01625 7d1d6745fee87604a6bffcf1629783fa 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 65 8.0E-13 T 11-11-2016 IPR010035 ThiS, thiamine-biosynthesis S40542_RS01625 7d1d6745fee87604a6bffcf1629783fa 65 Pfam PF02597 ThiS family 4 65 3.9E-8 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 S40542_RS01625 7d1d6745fee87604a6bffcf1629783fa 65 SUPERFAMILY SSF54285 1 65 2.06E-11 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp S40542_RS01625 7d1d6745fee87604a6bffcf1629783fa 65 Gene3D G3DSA:3.10.20.30 1 65 1.1E-15 T 11-11-2016 IPR012675 Beta-grasp domain S40542_RS16090 ecf6aede76ad4f4ea9fa48b2d4ea10c3 259 Pfam PF01925 Sulfite exporter TauE/SafE 15 251 8.5E-38 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 S40542_RS18725 f194fd0c4fb95bd93774214718740fbc 259 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 244 20.133 T 11-11-2016 IPR026579 Cell division protein FtsQ GO:0090529 S40542_RS18725 f194fd0c4fb95bd93774214718740fbc 259 Pfam PF08478 POTRA domain, FtsQ-type 52 119 8.7E-19 T 11-11-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type S40542_RS18725 f194fd0c4fb95bd93774214718740fbc 259 Pfam PF03799 Cell division protein FtsQ 123 236 1.0E-25 T 11-11-2016 IPR005548 Cell division protein FtsQ/DivIB S40542_RS12625 aefdd517dba6b8d360abca5f6c29e077 134 Gene3D G3DSA:3.10.180.10 12 130 6.0E-19 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS12625 aefdd517dba6b8d360abca5f6c29e077 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 2.4E-13 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain S40542_RS12625 aefdd517dba6b8d360abca5f6c29e077 134 SUPERFAMILY SSF54593 9 133 5.77E-23 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS12810 aa5f3219dfacaf90b4e007a3078043f1 131 Pfam PF04138 GtrA-like protein 5 121 8.6E-17 T 11-11-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 S40542_RS06350 6ba7aca8495fcc098783dbc73421e92c 205 Pfam PF03352 Methyladenine glycosylase 7 183 8.7E-78 T 11-11-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 S40542_RS06350 6ba7aca8495fcc098783dbc73421e92c 205 SUPERFAMILY SSF48150 3 188 5.89E-76 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS06350 6ba7aca8495fcc098783dbc73421e92c 205 Gene3D G3DSA:1.10.340.30 3 184 9.1E-79 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 S40542_RS10590 ae9d858eb6c11566257343c53963f972 338 Pfam PF16162 Domain of unknown function (DUF4868) 129 316 4.7E-22 T 11-11-2016 IPR032359 Protein of unknown function DUF4868 S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 Pfam PF03958 Bacterial type II/III secretion system short domain 200 266 1.4E-11 T 11-11-2016 IPR005644 NolW-like S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 Pfam PF03958 Bacterial type II/III secretion system short domain 274 355 4.6E-19 T 11-11-2016 IPR005644 NolW-like S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 Pfam PF00263 Bacterial type II and III secretion system protein 460 621 7.1E-51 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 37 630 1.2E-159 T 11-11-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 566 599 - T 11-11-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 355 365 3.2E-37 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 491 501 3.2E-37 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 585 603 3.2E-37 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 456 480 3.2E-37 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS02070 5a64fb1aac5c80270fc2f0c2a2348b20 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 608 622 3.2E-37 T 11-11-2016 IPR001775 GspD/PilQ family S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 Pfam PF00175 Oxidoreductase NAD-binding domain 128 228 9.1E-19 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 Pfam PF00970 Oxidoreductase FAD-binding domain 17 108 5.2E-5 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 Gene3D G3DSA:3.40.50.80 123 250 1.3E-32 T 11-11-2016 S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 SUPERFAMILY SSF63380 13 97 1.97E-9 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 Gene3D G3DSA:2.40.30.10 14 118 2.2E-10 T 11-11-2016 S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 PRINTS PR00410 Phenol hydroxylase reductase family signature 217 225 1.3E-8 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 PRINTS PR00410 Phenol hydroxylase reductase family signature 42 54 1.3E-8 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 PRINTS PR00410 Phenol hydroxylase reductase family signature 127 146 1.3E-8 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 S40542_RS14855 85468c6a77240a7b12fac71a42586148 260 SUPERFAMILY SSF52343 121 250 4.85E-33 T 11-11-2016 S40542_RS07595 5a44a977f41561dd2f0fe22d16969c82 862 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 426 495 1.9E-14 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 S40542_RS15875 9bc44cff630bc047da3d2ec5220a7863 241 Gene3D G3DSA:3.60.140.10 2 241 7.3E-88 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase S40542_RS15875 9bc44cff630bc047da3d2ec5220a7863 241 SUPERFAMILY SSF64438 2 240 1.36E-78 T 11-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic S40542_RS15875 9bc44cff630bc047da3d2ec5220a7863 241 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 23 240 5.0E-59 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase S40542_RS15875 9bc44cff630bc047da3d2ec5220a7863 241 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 239 3.2E-70 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase S40542_RS07945 8eb5399489f3abbcbe32f81ba842e3c2 432 Gene3D G3DSA:3.40.50.720 6 42 5.4E-8 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS07945 8eb5399489f3abbcbe32f81ba842e3c2 432 Gene3D G3DSA:3.50.50.60 170 268 2.5E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07945 8eb5399489f3abbcbe32f81ba842e3c2 432 Gene3D G3DSA:3.50.50.60 380 420 2.5E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07945 8eb5399489f3abbcbe32f81ba842e3c2 432 Gene3D G3DSA:3.90.660.10 269 344 9.6E-12 T 11-11-2016 S40542_RS07945 8eb5399489f3abbcbe32f81ba842e3c2 432 Gene3D G3DSA:3.90.660.10 43 108 9.6E-12 T 11-11-2016 S40542_RS07945 8eb5399489f3abbcbe32f81ba842e3c2 432 SUPERFAMILY SSF51905 10 279 3.24E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07945 8eb5399489f3abbcbe32f81ba842e3c2 432 SUPERFAMILY SSF51905 379 413 3.24E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07945 8eb5399489f3abbcbe32f81ba842e3c2 432 Pfam PF01593 Flavin containing amine oxidoreductase 73 413 1.4E-12 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 SMART SM00862 25 100 3.9E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 SUPERFAMILY SSF46894 4 103 1.13E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 Pfam PF07676 WD40-like Beta Propeller Repeat 504 524 0.069 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 Pfam PF07676 WD40-like Beta Propeller Repeat 157 183 2.1E-4 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 Pfam PF07676 WD40-like Beta Propeller Repeat 209 233 0.048 T 11-11-2016 IPR011659 WD40-like Beta Propeller S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 SUPERFAMILY SSF82171 275 399 6.47E-19 T 11-11-2016 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 SUPERFAMILY SSF82171 455 648 6.47E-19 T 11-11-2016 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 100 2.3E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 Gene3D G3DSA:2.120.10.60 355 386 1.5E-16 T 11-11-2016 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 Gene3D G3DSA:2.120.10.60 155 298 1.5E-16 T 11-11-2016 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 Gene3D G3DSA:2.120.10.60 387 616 5.0E-17 T 11-11-2016 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 SUPERFAMILY SSF82171 155 293 6.47E-10 T 11-11-2016 S40542_RS12650 5189fe95b1390975c616bedf8a359b2c 698 Gene3D G3DSA:1.10.10.10 9 103 3.3E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS10815 336a8a1e0de8ffcac889de73dee08510 144 Pfam PF14015 Protein of unknown function (DUF4231) 14 111 5.7E-25 T 11-11-2016 IPR025325 Protein of unknown function DUF4231 S40542_RS03745 64d47495b3e1a97af914f7529a4f55ed 213 SUPERFAMILY SSF51735 1 211 5.37E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03745 64d47495b3e1a97af914f7529a4f55ed 213 Pfam PF13460 NAD(P)H-binding 7 196 1.6E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS03745 64d47495b3e1a97af914f7529a4f55ed 213 Gene3D G3DSA:3.40.50.720 1 213 5.5E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS07200 e83ec2ecff20c7f970f60cf83b108617 521 SUPERFAMILY SSF48431 298 470 2.88E-10 T 11-11-2016 IPR011030 Vitellinogen, superhelical GO:0005319|GO:0006869 Reactome: R-HSA-174800 S40542_RS07200 e83ec2ecff20c7f970f60cf83b108617 521 Gene3D G3DSA:1.25.10.10 314 470 2.4E-11 T 11-11-2016 IPR011989 Armadillo-like helical S40542_RS14955 794665722a46f1a47d78f7695aeb6a4c 185 SUPERFAMILY SSF55811 27 177 2.17E-29 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS14955 794665722a46f1a47d78f7695aeb6a4c 185 Gene3D G3DSA:3.90.79.10 25 183 4.9E-33 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 S40542_RS14955 794665722a46f1a47d78f7695aeb6a4c 185 Pfam PF00293 NUDIX domain 27 142 2.6E-12 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 S40542_RS08105 3f04a9e367aea27c66f7e89873a669e0 400 Pfam PF12704 MacB-like periplasmic core domain 19 243 9.8E-12 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS08105 3f04a9e367aea27c66f7e89873a669e0 400 Pfam PF02687 FtsX-like permease family 281 393 1.3E-16 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS07605 605f7baabcab296b39f679cc223b16f3 344 Pfam PF01548 Transposase 9 146 6.6E-13 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 S40542_RS07605 605f7baabcab296b39f679cc223b16f3 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 287 1.1E-21 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 S40542_RS07565 42a6fb5b17cf1e13b3ad42129611e32c 201 Pfam PF14220 Domain of unknown function (DUF4329) 63 193 5.6E-20 T 11-11-2016 IPR025479 Domain of unknown function DUF4329 S40542_RS05960 30010d020cdfbaefee962b13ed7b9ea0 157 Gene3D G3DSA:1.10.490.10 3 135 3.8E-10 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 S40542_RS05960 30010d020cdfbaefee962b13ed7b9ea0 157 SUPERFAMILY SSF46458 1 135 8.82E-10 T 11-11-2016 IPR009050 Globin-like S40542_RS07580 b37fe6df2816501d3f881b0b83e152c1 608 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 181 250 1.2E-14 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 S40542_RS07555 8399a3a40b5f321e6a59a6afd11059bc 866 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 426 495 2.0E-14 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 S40542_RS13530 b3fcdf6f5233735292dba41d3903598f 479 Pfam PF03929 PepSY-associated TM region 7 457 6.3E-15 T 11-11-2016 IPR005625 PepSY-associated TM protein S40542_RS14915 4f8a833584142bcd2aa082b6b2770e6a 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 122 1.4E-31 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 S40542_RS13910 f8ce484e35e32e279c4f1c6c15b2dc7d 282 Gene3D G3DSA:3.30.2010.10 68 156 1.8E-31 T 11-11-2016 S40542_RS13910 f8ce484e35e32e279c4f1c6c15b2dc7d 282 Hamap MF_00188 Protease HtpX [htpX]. 1 282 23.813 T 11-11-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 S40542_RS13910 f8ce484e35e32e279c4f1c6c15b2dc7d 282 Pfam PF01435 Peptidase family M48 74 282 3.5E-37 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 S40542_RS04790 d6831e8c84af7a72496a3cef5cdea424 132 Pfam PF11026 Protein of unknown function (DUF2721) 4 120 1.0E-34 T 11-11-2016 IPR021279 Protein of unknown function DUF2721 S40542_RS19095 a66e77d476d1e23b5454b4690e3f5400 158 Pfam PF04093 rod shape-determining protein MreD 7 150 1.8E-31 T 11-11-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 S40542_RS19095 a66e77d476d1e23b5454b4690e3f5400 158 PIRSF PIRSF018472 1 158 3.4E-53 T 11-11-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type S40542_RS19095 a66e77d476d1e23b5454b4690e3f5400 158 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 7 150 3.3E-41 T 11-11-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 S40542_RS08750 58140dfc2adb06d5776eb70d76d41255 127 Gene3D G3DSA:3.40.50.2300 5 126 4.7E-36 T 11-11-2016 S40542_RS08750 58140dfc2adb06d5776eb70d76d41255 127 SUPERFAMILY SSF52172 7 126 2.85E-34 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS08750 58140dfc2adb06d5776eb70d76d41255 127 Pfam PF00072 Response regulator receiver domain 13 124 1.4E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS08750 58140dfc2adb06d5776eb70d76d41255 127 SMART SM00448 11 123 2.2E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS00800 105d6144e07b08db5ab3604d7bd80b05 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 8 285 35.475 T 11-11-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 S40542_RS00800 105d6144e07b08db5ab3604d7bd80b05 286 Gene3D G3DSA:3.40.50.150 64 285 9.9E-70 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS00800 105d6144e07b08db5ab3604d7bd80b05 286 Gene3D G3DSA:2.30.140.10 7 60 2.5E-18 T 11-11-2016 S40542_RS00800 105d6144e07b08db5ab3604d7bd80b05 286 TIGRFAM TIGR00417 speE: spermidine synthase 9 279 1.3E-82 T 11-11-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 S40542_RS00800 105d6144e07b08db5ab3604d7bd80b05 286 Pfam PF01564 Spermine/spermidine synthase 9 244 2.2E-65 T 11-11-2016 S40542_RS00800 105d6144e07b08db5ab3604d7bd80b05 286 SUPERFAMILY SSF53335 9 285 2.0E-76 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS00800 105d6144e07b08db5ab3604d7bd80b05 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 85 98 - T 11-11-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 S40542_RS20055 17f85ec157880b9a9e28589a1ca3ce9b 194 Gene3D G3DSA:1.10.287.110 139 193 1.4E-11 T 11-11-2016 IPR001623 DnaJ domain S40542_RS20055 17f85ec157880b9a9e28589a1ca3ce9b 194 SUPERFAMILY SSF46565 139 192 6.93E-11 T 11-11-2016 IPR001623 DnaJ domain S40542_RS20055 17f85ec157880b9a9e28589a1ca3ce9b 194 Pfam PF12339 DNA-J related protein 3 128 1.1E-32 T 11-11-2016 IPR021059 DnaJ-related protein, N-terminal S40542_RS19640 b8d0e090bfe7b89601c95fa8e9de3301 220 SUPERFAMILY SSF75708 70 202 7.32E-5 T 11-11-2016 S40542_RS19640 b8d0e090bfe7b89601c95fa8e9de3301 220 Pfam PF11172 Protein of unknown function (DUF2959) 20 217 4.0E-84 T 11-11-2016 IPR021342 Protein of unknown function DUF2959 S40542_RS04810 aba5e60a2fa97997a7c93ae761563742 193 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 187 2.9E-68 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 S40542_RS04810 aba5e60a2fa97997a7c93ae761563742 193 SMART SM01207 3 178 7.2E-80 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 S40542_RS04810 aba5e60a2fa97997a7c93ae761563742 193 Pfam PF02660 Glycerol-3-phosphate acyltransferase 5 177 7.3E-48 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 S40542_RS04810 aba5e60a2fa97997a7c93ae761563742 193 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 1 186 18.452 T 11-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 S40542_RS14345 1d446ffeb5bae1a65122cbbd3b795c1d 80 Pfam PF04325 Protein of unknown function (DUF465) 29 74 2.4E-6 T 11-11-2016 IPR007420 Protein of unknown function DUF465 S40542_RS00690 5e2c845937523a856c5b311de8d17934 778 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 777 2.2E-265 T 11-11-2016 IPR010706 Fatty acid cis-trans isomerase S40542_RS06025 a06966d0a42a107293c2ae456bd69393 123 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 104 3.4E-24 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 S40542_RS17525 552a414314dcaf7e72b7cec2d0919bdc 157 Pfam PF11143 Protein of unknown function (DUF2919) 5 149 1.7E-33 T 11-11-2016 IPR021318 Protein of unknown function DUF2919 S40542_RS02890 fb5b9c683680777df4cb29d68b6d6b8e 254 Pfam PF06468 Spondin_N 57 229 8.2E-43 T 11-11-2016 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 S40542_RS17310 9a2b1107a5d5d2a3f174b4234cf3eebc 158 SUPERFAMILY SSF55729 7 103 3.68E-5 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS17310 9a2b1107a5d5d2a3f174b4234cf3eebc 158 Gene3D G3DSA:3.40.630.30 14 100 1.6E-4 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13390 804d0811b6c625b21ff6991d084122f0 120 SUPERFAMILY SSF54593 7 117 5.64E-14 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS13390 804d0811b6c625b21ff6991d084122f0 120 Gene3D G3DSA:3.10.180.10 1 117 6.7E-26 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase S40542_RS04170 6257f11e8214aee98c00c9aff24527e7 255 Gene3D G3DSA:3.40.225.10 16 226 7.0E-57 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS04170 6257f11e8214aee98c00c9aff24527e7 255 SUPERFAMILY SSF53639 16 222 2.75E-55 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS04170 6257f11e8214aee98c00c9aff24527e7 255 SMART SM01007 22 201 1.3E-52 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS04170 6257f11e8214aee98c00c9aff24527e7 255 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 201 2.2E-41 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal S40542_RS18455 e5fd2f129abc053b373076a5c0391455 704 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 29 166 8.6E-12 T 11-11-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH S40542_RS18455 e5fd2f129abc053b373076a5c0391455 704 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 176 596 3.0E-5 T 11-11-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH S40542_RS16010 e64caf13544cac04b6b664b517ae56c6 690 SUPERFAMILY SSF56935 48 660 3.66E-54 T 11-11-2016 S40542_RS16010 e64caf13544cac04b6b664b517ae56c6 690 Pfam PF00593 TonB dependent receptor 420 587 3.0E-10 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS16010 e64caf13544cac04b6b664b517ae56c6 690 Gene3D G3DSA:2.40.170.20 160 626 2.6E-33 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS14285 5d89145bbbb30af8aafeedc5cf7f2971 524 SUPERFAMILY SSF49299 31 124 1.96E-5 T 11-11-2016 IPR000601 PKD domain S40542_RS14285 5d89145bbbb30af8aafeedc5cf7f2971 524 SUPERFAMILY SSF56601 144 483 3.93E-48 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS14285 5d89145bbbb30af8aafeedc5cf7f2971 524 Pfam PF00144 Beta-lactamase 163 483 4.4E-38 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS14285 5d89145bbbb30af8aafeedc5cf7f2971 524 Gene3D G3DSA:3.40.710.10 129 483 3.3E-50 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS10060 6683ef9f9d39861acfc2b2c7d2e4c9d3 171 Pfam PF04463 Protein of unknown function (DUF523) 4 148 5.1E-43 T 11-11-2016 IPR007553 Domain of unknown function DUF523 S40542_RS09400 79f260142c3cfe3c50e248566e2f9b70 234 PIRSF PIRSF037208 1 234 1.1E-77 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic S40542_RS09400 79f260142c3cfe3c50e248566e2f9b70 234 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 85 8.0E-16 T 11-11-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 S40542_RS09400 79f260142c3cfe3c50e248566e2f9b70 234 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 35.455 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic S40542_RS09400 79f260142c3cfe3c50e248566e2f9b70 234 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 106 226 9.6E-36 T 11-11-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 S40542_RS09400 79f260142c3cfe3c50e248566e2f9b70 234 SUPERFAMILY SSF55729 79 233 3.01E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS15545 8ddbb06a7098e45b15b677473db2dd0f 297 SUPERFAMILY SSF53187 21 286 2.49E-48 T 11-11-2016 S40542_RS15545 8ddbb06a7098e45b15b677473db2dd0f 297 Pfam PF04389 Peptidase family M28 80 285 2.4E-35 T 11-11-2016 IPR007484 Peptidase M28 S40542_RS15545 8ddbb06a7098e45b15b677473db2dd0f 297 Gene3D G3DSA:3.40.630.10 24 287 8.6E-46 T 11-11-2016 S40542_RS18475 a1aaea549183373a5ed6f7e0b9825a03 253 SUPERFAMILY SSF53448 23 243 1.02E-27 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18475 a1aaea549183373a5ed6f7e0b9825a03 253 Gene3D G3DSA:3.90.550.10 29 249 8.2E-18 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.2E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 2.2E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.2E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.2E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.2E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.2E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.2E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 638 4.7E-113 T 11-11-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 1.3E-228 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.1E-87 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.1E-87 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-87 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.1E-87 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.1E-87 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-87 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.1E-87 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.1E-87 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 S40542_RS06555 bbc10488987b4f0c3bf77200fd74bb8f 650 Pfam PF01578 Cytochrome C assembly protein 89 297 2.9E-50 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 S40542_RS20435 efc918bb738d0a5966c29a1b34dcb7f6 205 SUPERFAMILY SSF54621 2 184 1.57E-12 T 11-11-2016 IPR010495 Haem-binding HasA S40542_RS20435 efc918bb738d0a5966c29a1b34dcb7f6 205 Pfam PF06438 Heme-binding protein A (HasA) 1 197 1.5E-14 T 11-11-2016 IPR010495 Haem-binding HasA S40542_RS20435 efc918bb738d0a5966c29a1b34dcb7f6 205 Gene3D G3DSA:3.30.1500.10 1 184 1.7E-14 T 11-11-2016 IPR010495 Haem-binding HasA S40542_RS07230 2f9d14bb0f0e2818eb9ccac2786aaa5f 225 Pfam PF14329 Domain of unknown function (DUF4386) 9 214 3.8E-29 T 11-11-2016 IPR025495 Protein of unknown function DUF4386 S40542_RS16450 74e39e0c83e49b9cfed45227cc43cdf5 75 Pfam PF16778 Phage tail assembly chaperone protein 16 73 1.2E-15 T 11-11-2016 IPR031893 Phage tail assembly chaperone protein S40542_RS16605 e331d1925f4a08b1d5ba61498063b7cd 139 Gene3D G3DSA:1.10.530.40 4 138 4.6E-34 T 11-11-2016 IPR023347 Lysozyme domain GO:0003796 S40542_RS16605 e331d1925f4a08b1d5ba61498063b7cd 139 Pfam PF00959 Phage lysozyme 29 126 3.2E-12 T 11-11-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 S40542_RS16605 e331d1925f4a08b1d5ba61498063b7cd 139 SUPERFAMILY SSF53955 4 138 1.23E-36 T 11-11-2016 IPR023346 Lysozyme-like domain S40542_RS06590 af1debd1704de5ed95141736128d27ba 492 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 430 3.8E-90 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 S40542_RS06590 af1debd1704de5ed95141736128d27ba 492 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 S40542_RS06590 af1debd1704de5ed95141736128d27ba 492 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 412 432 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 S40542_RS06590 af1debd1704de5ed95141736128d27ba 492 Pfam PF00474 Sodium:solute symporter family 34 430 8.8E-101 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 S40542_RS06590 af1debd1704de5ed95141736128d27ba 492 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 489 2.4E-210 T 11-11-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 S40542_RS03660 6ecc9d71771e01b8194aa462c6c356fb 249 Gene3D G3DSA:3.20.20.370 10 230 2.1E-78 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 S40542_RS03660 6ecc9d71771e01b8194aa462c6c356fb 249 SUPERFAMILY SSF88713 13 227 1.65E-65 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 S40542_RS03660 6ecc9d71771e01b8194aa462c6c356fb 249 Pfam PF04748 Divergent polysaccharide deacetylase 17 227 5.3E-70 T 11-11-2016 IPR006837 Divergent polysaccharide deacetylase S40542_RS06575 d0de365f4b43557c0213493019458a07 243 Pfam PF04333 MlaA lipoprotein 28 217 1.4E-71 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 S40542_RS06575 d0de365f4b43557c0213493019458a07 243 PRINTS PR01805 VacJ lipoprotein signature 134 151 5.8E-25 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 S40542_RS06575 d0de365f4b43557c0213493019458a07 243 PRINTS PR01805 VacJ lipoprotein signature 29 42 5.8E-25 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 S40542_RS06575 d0de365f4b43557c0213493019458a07 243 PRINTS PR01805 VacJ lipoprotein signature 47 63 5.8E-25 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 S40542_RS06575 d0de365f4b43557c0213493019458a07 243 PRINTS PR01805 VacJ lipoprotein signature 98 115 5.8E-25 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 S40542_RS06170 fca2ffdc21187e652932a897dde9365f 694 Pfam PF01973 Protein of unknown function DUF115 304 460 2.9E-29 T 11-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like S40542_RS06170 fca2ffdc21187e652932a897dde9365f 694 Gene3D G3DSA:3.90.1480.10 310 550 2.2E-16 T 11-11-2016 S40542_RS02515 3a919aa0dbdbeda93822ed2b8e140705 120 Pfam PF11399 Protein of unknown function (DUF3192) 17 117 1.8E-34 T 11-11-2016 IPR021534 Protein of unknown function DUF3192 S40542_RS04540 364a065b71fd6b9141bcfff00d46b6a8 177 Pfam PF02325 YGGT family 105 172 4.1E-19 T 11-11-2016 IPR003425 CCB3/YggT GO:0016020 S40542_RS04540 364a065b71fd6b9141bcfff00d46b6a8 177 Pfam PF02325 YGGT family 10 76 7.6E-19 T 11-11-2016 IPR003425 CCB3/YggT GO:0016020 S40542_RS07845 2383d2c5b9302ed3b1b95cc89c7d012f 224 SMART SM00862 144 219 9.1E-13 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS07845 2383d2c5b9302ed3b1b95cc89c7d012f 224 Gene3D G3DSA:1.10.10.10 137 220 2.5E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS07845 2383d2c5b9302ed3b1b95cc89c7d012f 224 SUPERFAMILY SSF52172 2 170 2.7E-36 T 11-11-2016 IPR011006 CheY-like superfamily S40542_RS07845 2383d2c5b9302ed3b1b95cc89c7d012f 224 Pfam PF00072 Response regulator receiver domain 3 111 3.0E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07845 2383d2c5b9302ed3b1b95cc89c7d012f 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 3.1E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 S40542_RS07845 2383d2c5b9302ed3b1b95cc89c7d012f 224 SMART SM00448 1 111 2.5E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 S40542_RS07845 2383d2c5b9302ed3b1b95cc89c7d012f 224 Gene3D G3DSA:3.40.50.2300 2 119 1.9E-34 T 11-11-2016 S40542_RS15225 8ddca9a8c43f56abf1c6184b605e1f91 231 Pfam PF00005 ABC transporter 21 169 1.3E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS15225 8ddca9a8c43f56abf1c6184b605e1f91 231 SUPERFAMILY SSF52540 1 222 1.45E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15225 8ddca9a8c43f56abf1c6184b605e1f91 231 SMART SM00382 30 217 1.5E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS15225 8ddca9a8c43f56abf1c6184b605e1f91 231 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 S40542_RS15225 8ddca9a8c43f56abf1c6184b605e1f91 231 Gene3D G3DSA:3.40.50.300 1 220 4.8E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12275 0b146f5930038d0fedae33464a21c2ce 114 SUPERFAMILY SSF110857 7 110 9.16E-16 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like S40542_RS12275 0b146f5930038d0fedae33464a21c2ce 114 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 8 110 6.5E-13 T 11-11-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like S40542_RS12275 0b146f5930038d0fedae33464a21c2ce 114 Gene3D G3DSA:3.10.490.10 6 110 1.6E-17 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like S40542_RS05530 ac24297497be86278ff88908a04cf8ca 114 Pfam PF09361 Phasin protein 8 105 2.3E-15 T 11-11-2016 IPR018968 Phasin S40542_RS05530 ac24297497be86278ff88908a04cf8ca 114 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 111 1.9E-36 T 11-11-2016 IPR014176 Phasin, subfamily 3 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 434 455 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 24 49 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 141 153 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 312 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 71 94 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 251 272 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 356 374 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 98 122 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 219 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 403 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 171 189 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 342 3.3E-121 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 25 528 1.6E-213 T 11-11-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 34 475 1.6E-149 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 Gene3D G3DSA:1.20.210.10 12 528 2.1E-214 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 253 307 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS01910 249748a94afa8495dd39a65077b46d41 529 SUPERFAMILY SSF81442 21 528 1.05E-190 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 S40542_RS00695 9107312e2d990919cefa7eb9786638b4 208 Pfam PF00578 AhpC/TSA family 37 182 1.3E-21 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 S40542_RS00695 9107312e2d990919cefa7eb9786638b4 208 Gene3D G3DSA:3.40.30.10 32 204 1.3E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS00695 9107312e2d990919cefa7eb9786638b4 208 SUPERFAMILY SSF52833 32 198 1.02E-28 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS11250 4dce2069343438ed301b51a57e96806c 530 Gene3D G3DSA:2.130.10.130 95 256 9.2E-14 T 11-11-2016 S40542_RS11250 4dce2069343438ed301b51a57e96806c 530 Gene3D G3DSA:2.130.10.130 316 355 9.2E-14 T 11-11-2016 S40542_RS11250 4dce2069343438ed301b51a57e96806c 530 SUPERFAMILY SSF69318 85 267 8.76E-17 T 11-11-2016 S40542_RS06840 b724f15db3a5a5113c0d5c68e6c17312 486 Pfam PF14240 YHYH protein 267 356 5.1E-16 T 11-11-2016 IPR025924 YHYH domain S40542_RS00285 11dc58e781a8610636fb699fa3aa6bec 547 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 178 2.4E-11 T 11-11-2016 IPR024478 4HB MCP domain S40542_RS00285 11dc58e781a8610636fb699fa3aa6bec 547 Gene3D G3DSA:1.10.287.950 298 514 1.1E-51 T 11-11-2016 S40542_RS00285 11dc58e781a8610636fb699fa3aa6bec 547 SUPERFAMILY SSF58104 250 546 1.48E-64 T 11-11-2016 S40542_RS00285 11dc58e781a8610636fb699fa3aa6bec 547 SMART SM00283 284 545 8.3E-61 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS00285 11dc58e781a8610636fb699fa3aa6bec 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 2.9E-23 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00285 11dc58e781a8610636fb699fa3aa6bec 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 2.9E-23 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00285 11dc58e781a8610636fb699fa3aa6bec 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 409 2.9E-23 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS00285 11dc58e781a8610636fb699fa3aa6bec 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 544 8.6E-46 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS19410 c098ec8f853d4d66e1943ecfdabb2071 237 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 222 7.0E-37 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 S40542_RS19410 c098ec8f853d4d66e1943ecfdabb2071 237 SUPERFAMILY SSF51695 2 225 6.28E-60 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 S40542_RS19410 c098ec8f853d4d66e1943ecfdabb2071 237 Gene3D G3DSA:3.20.20.190 2 231 3.6E-62 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 S40542_RS18240 c7ea55b4ec784760d6058272e5bc8cec 324 SUPERFAMILY SSF56281 42 122 1.4E-10 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS18240 c7ea55b4ec784760d6058272e5bc8cec 324 SUPERFAMILY SSF56281 170 269 1.4E-10 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS18240 c7ea55b4ec784760d6058272e5bc8cec 324 Gene3D G3DSA:3.60.15.10 20 130 1.5E-13 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS18240 c7ea55b4ec784760d6058272e5bc8cec 324 Gene3D G3DSA:3.60.15.10 177 274 1.5E-13 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS00740 7cb0c50eaa6d51f4dc166ae2c61a94e0 394 SUPERFAMILY SSF51556 25 271 8.16E-97 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS00740 7cb0c50eaa6d51f4dc166ae2c61a94e0 394 SUPERFAMILY SSF51556 307 388 8.16E-97 T 11-11-2016 IPR032466 Metal-dependent hydrolase S40542_RS00740 7cb0c50eaa6d51f4dc166ae2c61a94e0 394 Gene3D G3DSA:3.20.20.140 26 391 6.3E-120 T 11-11-2016 S40542_RS00740 7cb0c50eaa6d51f4dc166ae2c61a94e0 394 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 31 386 3.3E-98 T 11-11-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 S40542_RS14830 01535488c3dbf7da177f5a605d8281c6 199 Gene3D G3DSA:1.20.1540.10 36 182 2.2E-15 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 S40542_RS14830 01535488c3dbf7da177f5a605d8281c6 199 Pfam PF01694 Rhomboid family 45 184 7.8E-17 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 S40542_RS14830 01535488c3dbf7da177f5a605d8281c6 199 SUPERFAMILY SSF144091 14 185 3.4E-21 T 11-11-2016 S40542_RS16580 13942f3886b6e30c89e58925ce438995 199 Pfam PF12571 Phage tail-collar fibre protein 23 112 7.1E-7 T 11-11-2016 IPR022225 Phage tail fibre protein S40542_RS04535 52d4cc30c6544dd3aa7faaa7fad6bdbb 146 Pfam PF14467 Domain of unknown function (DUF4426) 29 146 1.6E-44 T 11-11-2016 IPR025218 Domain of unknown function DUF4426 S40542_RS10175 1000a2add456f1f3b2e0b41acc7d58d9 344 Gene3D G3DSA:3.20.20.210 2 341 1.3E-90 T 11-11-2016 S40542_RS10175 1000a2add456f1f3b2e0b41acc7d58d9 344 SUPERFAMILY SSF51726 7 343 4.32E-70 T 11-11-2016 S40542_RS10175 1000a2add456f1f3b2e0b41acc7d58d9 344 PIRSF PIRSF005632 1 343 2.0E-193 T 11-11-2016 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit S40542_RS10175 1000a2add456f1f3b2e0b41acc7d58d9 344 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 2.3E-36 T 11-11-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 S40542_RS13255 1ed631c0aa73da17bdc61430cb4a13e2 456 SUPERFAMILY SSF51412 112 292 6.77E-20 T 11-11-2016 S40542_RS13255 1ed631c0aa73da17bdc61430cb4a13e2 456 SUPERFAMILY SSF51412 14 69 6.77E-20 T 11-11-2016 S40542_RS13255 1ed631c0aa73da17bdc61430cb4a13e2 456 TIGRFAM TIGR02814 pfaD_fam: PfaD family protein 2 442 2.1E-197 T 11-11-2016 IPR014179 PfaD family protein KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 S40542_RS13255 1ed631c0aa73da17bdc61430cb4a13e2 456 Gene3D G3DSA:3.20.20.70 15 296 4.6E-17 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS04310 28a5d6bd033bd30e8ebff79743b7b932 312 Gene3D G3DSA:2.40.160.10 23 307 1.2E-48 T 11-11-2016 IPR023614 Porin domain S40542_RS04310 28a5d6bd033bd30e8ebff79743b7b932 312 Pfam PF13609 Gram-negative porin 13 297 1.6E-37 T 11-11-2016 S40542_RS04310 28a5d6bd033bd30e8ebff79743b7b932 312 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 146 157 4.0E-5 T 11-11-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 S40542_RS04310 28a5d6bd033bd30e8ebff79743b7b932 312 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 304 312 4.0E-5 T 11-11-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 S40542_RS04310 28a5d6bd033bd30e8ebff79743b7b932 312 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 92 102 4.0E-5 T 11-11-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 S40542_RS04310 28a5d6bd033bd30e8ebff79743b7b932 312 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 47 58 4.0E-5 T 11-11-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 S40542_RS04310 28a5d6bd033bd30e8ebff79743b7b932 312 SUPERFAMILY SSF56935 23 312 1.58E-53 T 11-11-2016 S40542_RS04500 65ac263983bc32309689f340b016970d 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 353 3.0E-65 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 S40542_RS04500 65ac263983bc32309689f340b016970d 355 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 7.5E-130 T 11-11-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 S40542_RS15660 73d6539632912042ea357349c4c4bac7 151 Gene3D G3DSA:3.40.50.300 130 145 9.2E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS15660 73d6539632912042ea357349c4c4bac7 151 Gene3D G3DSA:3.40.50.300 44 98 9.2E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS07930 096e324bfd2ce233a38c803530d81cab 378 Gene3D G3DSA:3.50.50.60 98 168 7.3E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07930 096e324bfd2ce233a38c803530d81cab 378 Gene3D G3DSA:3.50.50.60 252 365 7.3E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07930 096e324bfd2ce233a38c803530d81cab 378 Gene3D G3DSA:3.50.50.60 1 43 7.3E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07930 096e324bfd2ce233a38c803530d81cab 378 SUPERFAMILY SSF51905 249 335 2.59E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS07930 096e324bfd2ce233a38c803530d81cab 378 SUPERFAMILY SSF51905 1 156 2.59E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS00065 2492459c3ae1b45e5e3da1ef6fc855c8 204 SUPERFAMILY SSF54211 3 130 7.97E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold S40542_RS00065 2492459c3ae1b45e5e3da1ef6fc855c8 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 2.2E-25 T 11-11-2016 IPR001498 Impact, N-terminal S40542_RS00065 2492459c3ae1b45e5e3da1ef6fc855c8 204 Gene3D G3DSA:3.30.230.30 4 128 2.6E-42 T 11-11-2016 IPR001498 Impact, N-terminal S40542_RS00065 2492459c3ae1b45e5e3da1ef6fc855c8 204 Gene3D G3DSA:3.30.70.240 144 201 2.4E-4 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain S40542_RS00065 2492459c3ae1b45e5e3da1ef6fc855c8 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 203 6.0E-61 T 11-11-2016 IPR015796 Impact family, bacterial/archaeal S40542_RS02770 381ccc119728ecb76b73a205d4c262c5 400 SUPERFAMILY SSF46785 294 369 1.44E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02770 381ccc119728ecb76b73a205d4c262c5 400 Gene3D G3DSA:1.10.10.10 299 354 5.0E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS02770 381ccc119728ecb76b73a205d4c262c5 400 SUPERFAMILY SSF52540 27 279 1.62E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS02770 381ccc119728ecb76b73a205d4c262c5 400 Gene3D G3DSA:3.40.50.300 24 209 3.9E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS04955 32dc5976aa13b1a32333de23c2ff5033 207 SUPERFAMILY SSF50891 34 202 2.05E-39 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS04955 32dc5976aa13b1a32333de23c2ff5033 207 Gene3D G3DSA:2.40.100.10 34 202 5.9E-37 T 11-11-2016 IPR029000 Cyclophilin-like domain S40542_RS04955 32dc5976aa13b1a32333de23c2ff5033 207 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 36 180 1.5E-33 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 S40542_RS19080 0f99213f589e6c437c99d8c824086977 1342 Pfam PF13502 AsmA-like C-terminal region 1005 1240 1.8E-56 T 11-11-2016 IPR032712 AsmA-like, C-terminal S40542_RS19080 0f99213f589e6c437c99d8c824086977 1342 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 14 1251 1.6E-234 T 11-11-2016 IPR011836 Conserved hypothetical protein CHP02099 S40542_RS19080 0f99213f589e6c437c99d8c824086977 1342 Pfam PF13116 Protein of unknown function 495 779 4.2E-62 T 11-11-2016 IPR025263 Domain of unknown function DUF3971 S40542_RS16110 9383a4a49a3bed3d9528c6b2b8e65eab 260 PIRSF PIRSF029958 2 260 1.2E-86 T 11-11-2016 IPR008701 Necrosis inducing protein S40542_RS16110 9383a4a49a3bed3d9528c6b2b8e65eab 260 Pfam PF05630 Necrosis inducing protein (NPP1) 43 245 1.3E-41 T 11-11-2016 IPR008701 Necrosis inducing protein S40542_RS15670 2c920d074da7843ba49161797bdc7786 106 SUPERFAMILY SSF102816 8 105 4.84E-21 T 11-11-2016 IPR007376 dsDNA mimic, putative S40542_RS15670 2c920d074da7843ba49161797bdc7786 106 Pfam PF04269 Protein of unknown function, DUF440 7 104 4.8E-29 T 11-11-2016 IPR007376 dsDNA mimic, putative S40542_RS15670 2c920d074da7843ba49161797bdc7786 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 9 105 6.0E-31 T 11-11-2016 IPR007376 dsDNA mimic, putative S40542_RS15670 2c920d074da7843ba49161797bdc7786 106 Gene3D G3DSA:3.10.450.140 7 105 3.6E-27 T 11-11-2016 IPR007376 dsDNA mimic, putative S40542_RS09450 3a68e74861cf894fd682fe921562434b 333 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 198 320 1.4E-37 T 11-11-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent S40542_RS09450 3a68e74861cf894fd682fe921562434b 333 SUPERFAMILY SSF53335 269 325 1.06E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09450 3a68e74861cf894fd682fe921562434b 333 SUPERFAMILY SSF53335 82 197 1.06E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS09450 3a68e74861cf894fd682fe921562434b 333 PIRSF PIRSF018005 3 328 3.6E-82 T 11-11-2016 IPR017804 Methyltransferase EgtD-like S40542_RS06865 70067be44dd64a51434f087029bc280b 343 Pfam PF06580 Histidine kinase 156 235 1.5E-22 T 11-11-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 S40542_RS06865 70067be44dd64a51434f087029bc280b 343 SUPERFAMILY SSF55874 211 342 9.3E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS06865 70067be44dd64a51434f087029bc280b 343 Gene3D G3DSA:3.30.565.10 204 342 4.3E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS01250 3d2e2bd7b5d3d48ccbaf8f863b40cf3d 254 Gene3D G3DSA:3.40.50.720 1 37 9.9E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01250 3d2e2bd7b5d3d48ccbaf8f863b40cf3d 254 Gene3D G3DSA:3.40.50.720 85 214 8.7E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS01250 3d2e2bd7b5d3d48ccbaf8f863b40cf3d 254 SUPERFAMILY SSF51735 2 253 4.27E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS08590 a33a9b82d13b015bf57c78d46767e664 641 Pfam PF00326 Prolyl oligopeptidase family 440 641 4.2E-44 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS08590 a33a9b82d13b015bf57c78d46767e664 641 SUPERFAMILY SSF69322 171 355 6.8E-12 T 11-11-2016 S40542_RS08590 a33a9b82d13b015bf57c78d46767e664 641 SUPERFAMILY SSF69322 38 104 6.8E-12 T 11-11-2016 S40542_RS08590 a33a9b82d13b015bf57c78d46767e664 641 Gene3D G3DSA:3.40.50.1820 336 641 1.7E-78 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS08590 a33a9b82d13b015bf57c78d46767e664 641 Gene3D G3DSA:2.120.10.30 38 103 1.3E-8 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS08590 a33a9b82d13b015bf57c78d46767e664 641 Gene3D G3DSA:2.120.10.30 167 286 1.3E-8 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS08590 a33a9b82d13b015bf57c78d46767e664 641 SUPERFAMILY SSF53474 390 641 3.24E-67 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS16285 c1d9d372d75a4de476cfcd8766d72d7e 470 SUPERFAMILY SSF56672 25 226 1.07E-23 T 11-11-2016 S40542_RS16285 c1d9d372d75a4de476cfcd8766d72d7e 470 Pfam PF00817 impB/mucB/samB family 25 147 1.5E-5 T 11-11-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 S40542_RS04735 3f2755691688b5769c7f7cfd5ead5cea 350 Gene3D G3DSA:3.40.50.2000 11 153 1.4E-23 T 11-11-2016 S40542_RS04735 3f2755691688b5769c7f7cfd5ead5cea 350 SUPERFAMILY SSF53756 10 346 2.62E-80 T 11-11-2016 S40542_RS04735 3f2755691688b5769c7f7cfd5ead5cea 350 Gene3D G3DSA:3.40.50.2000 165 347 3.4E-42 T 11-11-2016 S40542_RS04735 3f2755691688b5769c7f7cfd5ead5cea 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 313 6.4E-44 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 S40542_RS04700 d778a2894daf9dfb353687fe2a73132b 106 Pfam PF07027 Protein of unknown function (DUF1318) 19 106 5.4E-32 T 11-11-2016 IPR008309 Uncharacterised conserved protein UCP025560 S40542_RS04700 d778a2894daf9dfb353687fe2a73132b 106 PIRSF PIRSF025560 1 106 6.4E-37 T 11-11-2016 IPR008309 Uncharacterised conserved protein UCP025560 S40542_RS17255 2330d201c8408976a2f32e02691acff6 1239 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 903 1237 3.0E-53 T 11-11-2016 IPR007452 Translocation and assembly module TamB S40542_RS04230 36b5849a8ce2b5ffcb557c9bca29666a 295 SUPERFAMILY SSF53448 8 285 4.33E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS04230 36b5849a8ce2b5ffcb557c9bca29666a 295 Gene3D G3DSA:3.90.550.10 9 285 1.8E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS04230 36b5849a8ce2b5ffcb557c9bca29666a 295 Pfam PF12804 MobA-like NTP transferase domain 10 82 2.7E-7 T 11-11-2016 IPR025877 MobA-like NTP transferase S40542_RS12335 a658a18745a6670e465fa30246c7b771 385 Pfam PF04773 FecR protein 49 150 1.2E-12 T 11-11-2016 IPR006860 FecR protein S40542_RS17010 d503d3b3b3991489ec8357e29f00e4b2 423 Gene3D G3DSA:3.30.1950.10 126 176 4.4E-4 T 11-11-2016 S40542_RS17010 d503d3b3b3991489ec8357e29f00e4b2 423 Pfam PF02563 Polysaccharide biosynthesis/export protein 106 177 1.8E-6 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 S40542_RS17010 d503d3b3b3991489ec8357e29f00e4b2 423 Gene3D G3DSA:3.10.560.10 177 283 1.8E-11 T 11-11-2016 S40542_RS06765 369fe151fb8edaf8bbc8c29495e2c9ee 303 SMART SM01321 11 159 0.0042 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06765 369fe151fb8edaf8bbc8c29495e2c9ee 303 Gene3D G3DSA:3.30.70.1290 107 161 3.0E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06765 369fe151fb8edaf8bbc8c29495e2c9ee 303 Gene3D G3DSA:3.30.70.1290 21 54 3.0E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06765 369fe151fb8edaf8bbc8c29495e2c9ee 303 SUPERFAMILY SSF143422 13 53 1.57E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS06765 369fe151fb8edaf8bbc8c29495e2c9ee 303 SUPERFAMILY SSF143422 106 164 1.57E-17 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS04820 6d6555199b83751d1ae91521c504faf0 159 Gene3D G3DSA:3.30.70.560 3 148 1.3E-37 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS04820 6d6555199b83751d1ae91521c504faf0 159 SUPERFAMILY SSF55083 1 153 1.96E-39 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS04820 6d6555199b83751d1ae91521c504faf0 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 127 4.2E-26 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS04820 6d6555199b83751d1ae91521c504faf0 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 127 4.1E-26 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 S40542_RS10070 33552a09a4dc6cbc884300c52909b9f9 133 Gene3D G3DSA:3.90.1590.10 2 130 7.1E-30 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 S40542_RS10070 33552a09a4dc6cbc884300c52909b9f9 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 23 113 1.4E-15 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 S40542_RS10070 33552a09a4dc6cbc884300c52909b9f9 133 SUPERFAMILY SSF51316 2 132 5.96E-34 T 11-11-2016 IPR011057 Mss4-like S40542_RS11000 e600d84cf60e1421cc5b4ed61089d3de 143 SUPERFAMILY SSF54637 13 133 1.05E-34 T 11-11-2016 IPR029069 HotDog domain S40542_RS11000 e600d84cf60e1421cc5b4ed61089d3de 143 Pfam PF03061 Thioesterase superfamily 33 106 7.9E-14 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 S40542_RS11000 e600d84cf60e1421cc5b4ed61089d3de 143 Gene3D G3DSA:3.10.129.10 11 131 1.0E-42 T 11-11-2016 IPR029069 HotDog domain S40542_RS13460 b6a99261877eca1d67213b9ffdd9be15 214 Gene3D G3DSA:3.40.50.720 1 208 1.7E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13460 b6a99261877eca1d67213b9ffdd9be15 214 Pfam PF13460 NAD(P)H-binding 8 153 3.1E-9 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS13460 b6a99261877eca1d67213b9ffdd9be15 214 SUPERFAMILY SSF51735 1 207 1.87E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS04705 4e68fe9169c2de35c8d9199792d0cc42 181 Pfam PF07209 Protein of unknown function (DUF1415) 5 171 1.7E-62 T 11-11-2016 IPR009858 Protein of unknown function DUF1415 S40542_RS20420 32cbe2b0b3aaa34f89c41a755ac679c4 320 PIRSF PIRSF018266 2 319 7.5E-62 T 11-11-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component S40542_RS20420 32cbe2b0b3aaa34f89c41a755ac679c4 320 Pfam PF04773 FecR protein 115 205 1.5E-18 T 11-11-2016 IPR006860 FecR protein S40542_RS20420 32cbe2b0b3aaa34f89c41a755ac679c4 320 Pfam PF16220 Domain of unknown function (DUF4880) 13 55 2.7E-11 T 11-11-2016 IPR032623 FecR, N-terminal S40542_RS15685 0177ef58263581f0a0317ae48ba7d43c 229 Pfam PF04172 LrgB-like family 10 222 1.7E-59 T 11-11-2016 IPR007300 CidB/LrgB family S40542_RS05395 65ece6d7331366e76ca66c0af617e8ca 350 SUPERFAMILY SSF51430 1 349 2.1E-97 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain S40542_RS05395 65ece6d7331366e76ca66c0af617e8ca 350 Pfam PF00248 Aldo/keto reductase family 16 343 3.4E-70 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain S40542_RS05395 65ece6d7331366e76ca66c0af617e8ca 350 Gene3D G3DSA:3.20.20.100 1 348 7.2E-95 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain S40542_RS15570 4cb91bcd8e655f8d153adac549d3fe4e 353 Pfam PF06804 NlpB/DapX lipoprotein 36 346 6.2E-61 T 11-11-2016 IPR010653 NlpB/DapX lipoprotein S40542_RS06225 74341d70fa56c699badb2d1b313426ec 286 SUPERFAMILY SSF51735 5 278 2.46E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06225 74341d70fa56c699badb2d1b313426ec 286 Gene3D G3DSA:3.40.50.720 2 231 1.2E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06225 74341d70fa56c699badb2d1b313426ec 286 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 205 1.5E-22 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 S40542_RS05715 730a511e78e34d91ab05936f9745c4b9 671 SMART SM00283 409 670 3.2E-73 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS05715 730a511e78e34d91ab05936f9745c4b9 671 Gene3D G3DSA:1.10.287.950 424 642 1.3E-56 T 11-11-2016 S40542_RS05715 730a511e78e34d91ab05936f9745c4b9 671 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 103 5.9E-7 T 11-11-2016 IPR024478 4HB MCP domain S40542_RS05715 730a511e78e34d91ab05936f9745c4b9 671 Pfam PF00672 HAMP domain 323 390 7.7E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS05715 730a511e78e34d91ab05936f9745c4b9 671 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 463 669 2.3E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS05715 730a511e78e34d91ab05936f9745c4b9 671 SUPERFAMILY SSF58104 362 671 7.19E-76 T 11-11-2016 S40542_RS05715 730a511e78e34d91ab05936f9745c4b9 671 SMART SM00304 342 394 8.0E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS02810 af1b886c209a44e7c0600c9f3dc497e4 374 Pfam PF07730 Histidine kinase 182 242 9.0E-15 T 11-11-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 S40542_RS15665 ebbee65e3694aabeae7bda322cdef206 265 Pfam PF04338 Protein of unknown function, DUF481 43 264 4.0E-47 T 11-11-2016 IPR007433 Protein of unknown function DUF481 S40542_RS16000 7f7dd6cd6ef42121b33b7f3353a1aa34 574 SUPERFAMILY SSF55729 306 446 2.07E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS16000 7f7dd6cd6ef42121b33b7f3353a1aa34 574 SUPERFAMILY SSF69593 64 263 1.01E-13 T 11-11-2016 S40542_RS16000 7f7dd6cd6ef42121b33b7f3353a1aa34 574 SMART SM00563 81 198 1.7E-10 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS16000 7f7dd6cd6ef42121b33b7f3353a1aa34 574 Gene3D G3DSA:3.40.1130.10 66 197 1.2E-5 T 11-11-2016 S40542_RS16000 7f7dd6cd6ef42121b33b7f3353a1aa34 574 Pfam PF01553 Acyltransferase 71 195 4.5E-14 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 S40542_RS16000 7f7dd6cd6ef42121b33b7f3353a1aa34 574 Pfam PF13444 Acetyltransferase (GNAT) domain 324 424 2.8E-22 T 11-11-2016 S40542_RS11165 84ad84addf61f94c9a20e1965cc8223a 319 Pfam PF01292 Prokaryotic cytochrome b561 147 310 1.9E-21 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 S40542_RS11165 84ad84addf61f94c9a20e1965cc8223a 319 SUPERFAMILY SSF81342 145 305 2.98E-26 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 S40542_RS07410 314846a7e49cc1a567a5ed4738b1b981 362 SUPERFAMILY SSF56235 2 314 5.71E-62 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS07410 314846a7e49cc1a567a5ed4738b1b981 362 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 310 8.7E-35 T 11-11-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal S40542_RS07410 314846a7e49cc1a567a5ed4738b1b981 362 Gene3D G3DSA:3.60.60.10 2 313 1.5E-73 T 11-11-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 Reactome: R-HSA-1660662 S40542_RS01740 a944e49262fc47b6e28acb33c9d5f8fb 166 Gene3D G3DSA:1.25.40.10 116 151 5.2E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS19470 2a45a7e9ba5e0d98b571e590ef21933f 337 Pfam PF02371 Transposase IS116/IS110/IS902 family 208 285 3.6E-12 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 S40542_RS19470 2a45a7e9ba5e0d98b571e590ef21933f 337 Pfam PF01548 Transposase 8 147 1.1E-12 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 S40542_RS13995 37a8d4f3481b3495e19e78220d891e11 145 Pfam PF13778 Domain of unknown function (DUF4174) 29 138 3.7E-11 T 11-11-2016 IPR025232 Domain of unknown function DUF4174 S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.0E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.0E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.0E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.0E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.0E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 4.6E-37 T 11-11-2016 S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 Gene3D G3DSA:3.40.50.720 3 252 5.1E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS06250 c50464f05ed626ae01116dbf0c889dc0 259 SUPERFAMILY SSF51735 7 252 1.16E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS07340 48755be0aac0de4772ae9d9e46c6b92e 149 Pfam PF11220 Protein of unknown function (DUF3015) 25 137 1.5E-9 T 11-11-2016 IPR021383 Protein of unknown function DUF3015 S40542_RS09180 221d6aa6ae073a391732ad21daa4bb5c 57 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.1E-20 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type S40542_RS09180 221d6aa6ae073a391732ad21daa4bb5c 57 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 2.2E-14 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type S40542_RS07885 fe0b1c38de7535d9519f1a5a2283f8e4 120 Pfam PF12680 SnoaL-like domain 13 115 2.9E-9 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain S40542_RS07885 fe0b1c38de7535d9519f1a5a2283f8e4 120 SUPERFAMILY SSF54427 6 118 3.12E-18 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS07885 fe0b1c38de7535d9519f1a5a2283f8e4 120 PIRSF PIRSF030561 5 120 7.1E-38 T 11-11-2016 IPR008317 Uncharacterised conserved protein UCP030561 S40542_RS07885 fe0b1c38de7535d9519f1a5a2283f8e4 120 Gene3D G3DSA:3.10.450.50 5 118 1.4E-11 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS05855 0aef96d39f8ea70c5fe42f24c9056c6d 128 Pfam PF04519 Polymer-forming cytoskeletal 17 110 3.7E-26 T 11-11-2016 IPR007607 Protein of unknown function DUF583 S40542_RS05095 12cc5e9ce0dce26a6e6ad7ec2eeb59d4 393 SUPERFAMILY SSF103473 3 379 1.18E-39 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS05095 12cc5e9ce0dce26a6e6ad7ec2eeb59d4 393 Pfam PF07690 Major Facilitator Superfamily 6 336 1.4E-25 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS05095 12cc5e9ce0dce26a6e6ad7ec2eeb59d4 393 Gene3D G3DSA:1.20.1250.20 2 181 1.4E-10 T 11-11-2016 S40542_RS05095 12cc5e9ce0dce26a6e6ad7ec2eeb59d4 393 Gene3D G3DSA:1.20.1250.20 203 384 7.9E-21 T 11-11-2016 S40542_RS17105 036fc6fde7db7ceccbffd52b25f1318e 749 SUPERFAMILY SSF49344 22 170 1.1E-15 T 11-11-2016 S40542_RS17105 036fc6fde7db7ceccbffd52b25f1318e 749 Gene3D G3DSA:2.60.40.1190 22 170 8.1E-12 T 11-11-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 S40542_RS09615 25a5331b79face0fe27d2795f4a32360 445 Pfam PF13353 4Fe-4S single cluster domain 148 263 1.1E-4 T 11-11-2016 S40542_RS09615 25a5331b79face0fe27d2795f4a32360 445 Gene3D G3DSA:3.20.20.70 155 312 1.9E-5 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS09615 25a5331b79face0fe27d2795f4a32360 445 SUPERFAMILY SSF102114 156 323 1.83E-9 T 11-11-2016 S40542_RS03215 cae334d8734d3228934c8731e71fade4 307 Gene3D G3DSA:3.40.190.10 20 133 3.9E-4 T 11-11-2016 S40542_RS03215 cae334d8734d3228934c8731e71fade4 307 Gene3D G3DSA:3.40.190.10 239 280 3.9E-4 T 11-11-2016 S40542_RS15515 fc7eeb038af949ffe47a07b73c37c2be 607 Pfam PF16148 Domain of unknown function (DUF4856) 309 387 1.1E-15 T 11-11-2016 IPR032331 Protein of unknown function DUF4856 S40542_RS15515 fc7eeb038af949ffe47a07b73c37c2be 607 Gene3D G3DSA:2.60.40.60 46 141 1.3E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 Gene3D G3DSA:3.40.50.1820 642 899 1.6E-48 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 Pfam PF00326 Prolyl oligopeptidase family 728 898 7.8E-23 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 SUPERFAMILY SSF82171 43 79 1.96E-20 T 11-11-2016 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 SUPERFAMILY SSF82171 207 308 1.96E-20 T 11-11-2016 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 SUPERFAMILY SSF82171 127 149 1.96E-20 T 11-11-2016 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 SUPERFAMILY SSF82171 335 352 1.96E-20 T 11-11-2016 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 SUPERFAMILY SSF82171 404 639 1.96E-20 T 11-11-2016 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 Gene3D G3DSA:2.120.10.60 137 311 7.0E-10 T 11-11-2016 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 Gene3D G3DSA:2.120.10.60 440 607 8.1E-9 T 11-11-2016 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 Gene3D G3DSA:2.120.10.60 31 88 7.0E-10 T 11-11-2016 S40542_RS19280 bfead89d7832bf82a008b8ecf0462e76 917 SUPERFAMILY SSF53474 642 899 4.85E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS20090 a4940e94667796866265ac2d9b1a7c8f 136 SMART SM00116 13 61 0.0022 T 11-11-2016 IPR000644 CBS domain S40542_RS20090 a4940e94667796866265ac2d9b1a7c8f 136 SMART SM00116 80 127 0.0078 T 11-11-2016 IPR000644 CBS domain S40542_RS20090 a4940e94667796866265ac2d9b1a7c8f 136 Gene3D G3DSA:3.10.580.10 6 128 2.1E-23 T 11-11-2016 S40542_RS20090 a4940e94667796866265ac2d9b1a7c8f 136 SUPERFAMILY SSF54631 3 129 6.44E-25 T 11-11-2016 S40542_RS20090 a4940e94667796866265ac2d9b1a7c8f 136 Pfam PF00571 CBS domain 6 57 4.7E-5 T 11-11-2016 IPR000644 CBS domain S40542_RS20090 a4940e94667796866265ac2d9b1a7c8f 136 Pfam PF00571 CBS domain 73 127 1.5E-8 T 11-11-2016 IPR000644 CBS domain S40542_RS08650 661d9e163de6a1e1a1e9d2c79f2e36ab 104 Pfam PF03658 RnfH family Ubiquitin 2 84 1.8E-31 T 11-11-2016 IPR005346 RnfH protein S40542_RS08650 661d9e163de6a1e1a1e9d2c79f2e36ab 104 SUPERFAMILY SSF54285 1 76 4.71E-23 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp S40542_RS08650 661d9e163de6a1e1a1e9d2c79f2e36ab 104 Gene3D G3DSA:3.10.20.280 1 86 8.7E-33 T 11-11-2016 IPR005346 RnfH protein S40542_RS08650 661d9e163de6a1e1a1e9d2c79f2e36ab 104 Hamap MF_00460 Protein RnfH [rnfH]. 2 92 24.336 T 11-11-2016 IPR005346 RnfH protein S40542_RS12910 2605969c6349ad1fab4fbd75880bbf2e 229 Pfam PF14329 Domain of unknown function (DUF4386) 9 219 3.8E-45 T 11-11-2016 IPR025495 Protein of unknown function DUF4386 S40542_RS19930 8bd8eb3a9327abf12f5ac2a6b1b45d4f 686 SUPERFAMILY SSF51445 282 559 3.37E-6 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily S40542_RS19930 8bd8eb3a9327abf12f5ac2a6b1b45d4f 686 Pfam PF10566 Glycoside hydrolase 97 282 576 4.5E-111 T 11-11-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain S40542_RS19930 8bd8eb3a9327abf12f5ac2a6b1b45d4f 686 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 31 277 3.2E-70 T 11-11-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain S40542_RS19930 8bd8eb3a9327abf12f5ac2a6b1b45d4f 686 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 578 684 4.3E-29 T 11-11-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain S40542_RS00750 8e0ee0b3d465a7ce0dc06bd00560b1c8 326 PIRSF PIRSF005211 2 326 6.9E-100 T 11-11-2016 IPR012020 AB hydrolase 4 family S40542_RS00750 8e0ee0b3d465a7ce0dc06bd00560b1c8 326 Pfam PF00561 alpha/beta hydrolase fold 62 301 1.8E-16 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 S40542_RS00750 8e0ee0b3d465a7ce0dc06bd00560b1c8 326 Gene3D G3DSA:3.40.50.1820 43 173 3.8E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00750 8e0ee0b3d465a7ce0dc06bd00560b1c8 326 Gene3D G3DSA:3.40.50.1820 249 299 3.8E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00750 8e0ee0b3d465a7ce0dc06bd00560b1c8 326 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 228 269 - T 11-11-2016 IPR000952 AB hydrolase 4, conserved site S40542_RS00750 8e0ee0b3d465a7ce0dc06bd00560b1c8 326 SUPERFAMILY SSF53474 222 301 5.22E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS00750 8e0ee0b3d465a7ce0dc06bd00560b1c8 326 SUPERFAMILY SSF53474 35 189 5.22E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS04160 c29d01afe44750738862c1ab0a2512db 180 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 3 180 5.8E-52 T 11-11-2016 IPR018636 Protein of unknown function DUF2058 S40542_RS09715 328ca7383126261289d43836a0a0298b 115 Pfam PF12514 Protein of unknown function (DUF3718) 34 101 4.0E-8 T 11-11-2016 IPR022193 Protein of unknown function DUF3718 S40542_RS05090 64e5928a269ec8a3ac8aca61dfe75727 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 256 37.204 T 11-11-2016 IPR005583 Peroxide stress protein YaaA S40542_RS05090 64e5928a269ec8a3ac8aca61dfe75727 259 Pfam PF03883 Protein of unknown function (DUF328) 1 243 2.5E-92 T 11-11-2016 IPR005583 Peroxide stress protein YaaA S40542_RS09080 4c414dc7eece7fcac07f34ea9006df73 244 Pfam PF11932 Protein of unknown function (DUF3450) 10 234 1.3E-19 T 11-11-2016 IPR016866 Uncharacterised conserved protein UCP028069 S40542_RS04800 691520a684dcb27e2dbbfec9a4706624 199 Pfam PF04222 Protein of unknown function (DUF416) 6 194 7.0E-57 T 11-11-2016 IPR007338 Protein of unknown function DUF416 S40542_RS04800 691520a684dcb27e2dbbfec9a4706624 199 Gene3D G3DSA:1.20.1590.10 1 195 3.1E-59 T 11-11-2016 IPR023381 YP001051499.1-like domain S40542_RS01845 25dbd7923e0aeee410f05769c1f57df7 106 Gene3D G3DSA:3.30.70.830 4 105 6.3E-39 T 11-11-2016 S40542_RS01845 25dbd7923e0aeee410f05769c1f57df7 106 SUPERFAMILY SSF54913 2 105 3.6E-36 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta S40542_RS01845 25dbd7923e0aeee410f05769c1f57df7 106 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 7.3E-36 T 11-11-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 S40542_RS20100 e58dd16d2fb499168b950e73d730e873 374 Pfam PF07219 HemY protein N-terminus 26 130 1.3E-13 T 11-11-2016 IPR010817 HemY, N-terminal S40542_RS13405 8281b1b70dd48cb5bf9f1e4aad4fb48d 81 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 5 75 2.8E-36 T 11-11-2016 IPR019882 Conserved hypothetical protein CHP03643 S40542_RS13405 8281b1b70dd48cb5bf9f1e4aad4fb48d 81 Pfam PF10985 Protein of unknown function (DUF2805) 7 77 8.3E-36 T 11-11-2016 IPR019882 Conserved hypothetical protein CHP03643 S40542_RS14225 e17a3e11f3c8fa33919acb1df1d92371 203 Pfam PF04279 Intracellular septation protein A 1 201 1.0E-47 T 11-11-2016 IPR006008 Intracellular septation protein A GO:0016021 S40542_RS14225 e17a3e11f3c8fa33919acb1df1d92371 203 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 202 15.666 T 11-11-2016 IPR006008 Intracellular septation protein A GO:0016021 S40542_RS12100 0cf420f0fbff143f933a467460b3df48 269 Gene3D G3DSA:3.40.50.150 76 202 5.2E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS12100 0cf420f0fbff143f933a467460b3df48 269 SUPERFAMILY SSF53335 6 206 2.03E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS12100 0cf420f0fbff143f933a467460b3df48 269 PIRSF PIRSF018249 1 267 8.7E-76 T 11-11-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 S40542_RS12100 0cf420f0fbff143f933a467460b3df48 269 Pfam PF13649 Methyltransferase domain 88 161 6.5E-12 T 11-11-2016 S40542_RS11205 f8c96a49ade16c6ef4f8a451c04aea88 417 Pfam PF13437 HlyD family secretion protein 234 322 1.1E-10 T 11-11-2016 S40542_RS11205 f8c96a49ade16c6ef4f8a451c04aea88 417 Gene3D G3DSA:2.40.50.100 69 104 1.3E-5 T 11-11-2016 S40542_RS11205 f8c96a49ade16c6ef4f8a451c04aea88 417 Gene3D G3DSA:2.40.50.100 226 262 1.3E-5 T 11-11-2016 S40542_RS11205 f8c96a49ade16c6ef4f8a451c04aea88 417 SUPERFAMILY SSF111369 161 287 3.27E-5 T 11-11-2016 S40542_RS12680 8f66f414abff05a5ddceacb723045b91 630 SUPERFAMILY SSF53474 372 630 7.61E-68 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS12680 8f66f414abff05a5ddceacb723045b91 630 Gene3D G3DSA:2.120.10.30 63 99 1.0E-29 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS12680 8f66f414abff05a5ddceacb723045b91 630 Gene3D G3DSA:2.120.10.30 136 357 1.0E-29 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like S40542_RS12680 8f66f414abff05a5ddceacb723045b91 630 SUPERFAMILY SSF69304 64 98 4.58E-26 T 11-11-2016 S40542_RS12680 8f66f414abff05a5ddceacb723045b91 630 SUPERFAMILY SSF69304 135 360 4.58E-26 T 11-11-2016 S40542_RS12680 8f66f414abff05a5ddceacb723045b91 630 Gene3D G3DSA:3.40.50.1820 372 630 1.8E-68 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS12680 8f66f414abff05a5ddceacb723045b91 630 Pfam PF00326 Prolyl oligopeptidase family 419 629 4.9E-50 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 S40542_RS02805 f31da02a9c5926ffbdb6a83a33a8d02b 391 Pfam PF01757 Acyltransferase family 8 363 1.3E-38 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 S40542_RS16860 932c39e5723aed2504fd83cfa8188e4f 335 Gene3D G3DSA:3.40.50.300 2 260 2.5E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16860 932c39e5723aed2504fd83cfa8188e4f 335 SMART SM00382 32 242 4.3E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain S40542_RS16860 932c39e5723aed2504fd83cfa8188e4f 335 SUPERFAMILY SSF52540 3 258 8.91E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS16860 932c39e5723aed2504fd83cfa8188e4f 335 Pfam PF00005 ABC transporter 24 186 1.5E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 S40542_RS16860 932c39e5723aed2504fd83cfa8188e4f 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 323 1.6E-20 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 S40542_RS16860 932c39e5723aed2504fd83cfa8188e4f 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 8.3E-17 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 S40542_RS01045 8b1976c599e39adf5d36006064932e21 315 SUPERFAMILY SSF56925 212 315 9.02E-5 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS01045 8b1976c599e39adf5d36006064932e21 315 Gene3D G3DSA:2.40.160.20 196 313 2.2E-4 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS01045 8b1976c599e39adf5d36006064932e21 315 Gene3D G3DSA:2.40.160.20 72 148 2.2E-4 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 S40542_RS20520 d06707824cf760cda85b2a801a6ce7a2 299 SUPERFAMILY SSF50630 28 133 1.91E-6 T 11-11-2016 IPR021109 Aspartic peptidase domain S40542_RS20520 d06707824cf760cda85b2a801a6ce7a2 299 Pfam PF13650 Aspartyl protease 168 274 2.9E-9 T 11-11-2016 S40542_RS20375 231ef963a8ea127243d4ead202171829 237 Pfam PF10067 Predicted membrane protein (DUF2306) 61 215 2.3E-19 T 11-11-2016 IPR018750 Protein of unknown function DUF2306, membrane S40542_RS08450 24ad19e6d826d21b56b3c6ee0db8dcef 96 Gene3D G3DSA:3.30.70.900 2 92 3.9E-8 T 11-11-2016 S40542_RS08450 24ad19e6d826d21b56b3c6ee0db8dcef 96 SUPERFAMILY SSF54909 4 93 6.71E-8 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS06080 ca9ce97ff5d0307d41cd1d649cb35d8d 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site S40542_RS06080 ca9ce97ff5d0307d41cd1d649cb35d8d 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 131 1.1E-35 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 S40542_RS06080 ca9ce97ff5d0307d41cd1d649cb35d8d 137 Pfam PF00460 Flagella basal body rod protein 19 39 1.3E-7 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 S40542_RS06080 ca9ce97ff5d0307d41cd1d649cb35d8d 137 PIRSF PIRSF002889 1 134 3.2E-41 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 S40542_RS00655 6cd1306ca54605db191ba617eec83fd5 88 SUPERFAMILY SSF47336 9 85 5.63E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00655 6cd1306ca54605db191ba617eec83fd5 88 Pfam PF00550 Phosphopantetheine attachment site 21 81 1.8E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS00655 6cd1306ca54605db191ba617eec83fd5 88 Gene3D G3DSA:1.10.1200.10 3 85 1.6E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS19600 99a7d9aaf845dcbc86ecb54bc608e5b2 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 191 3.5E-86 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 S40542_RS19600 99a7d9aaf845dcbc86ecb54bc608e5b2 198 Gene3D G3DSA:3.40.50.300 2 197 4.1E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19600 99a7d9aaf845dcbc86ecb54bc608e5b2 198 Pfam PF01583 Adenylylsulphate kinase 25 178 2.2E-74 T 11-11-2016 S40542_RS19600 99a7d9aaf845dcbc86ecb54bc608e5b2 198 SUPERFAMILY SSF52540 19 195 2.21E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS19600 99a7d9aaf845dcbc86ecb54bc608e5b2 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 195 39.806 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 S40542_RS18515 ac042ee87ba97e93d24c0b640a43ae18 471 Pfam PF01943 Polysaccharide biosynthesis protein 5 275 3.6E-13 T 11-11-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 S40542_RS18515 ac042ee87ba97e93d24c0b640a43ae18 471 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 327 453 1.8E-11 T 11-11-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain S40542_RS08365 b52f4541be375f9a19a43e06fd9018a0 131 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 1 111 6.1E-31 T 11-11-2016 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain S40542_RS18380 3cb7ac5f40a8d290ee0cd392ed885251 231 Pfam PF12119 Protein of unknown function (DUF3581) 2 214 7.8E-92 T 11-11-2016 IPR021974 Protein of unknown function DUF3581 S40542_RS23190 f0c6f6f8a68cee1bece7251108eeefb2 238 Pfam PF00672 HAMP domain 85 145 1.4E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 S40542_RS12985 cf15879f6835d6b8dbb9a16c645d403b 375 Pfam PF00144 Beta-lactamase 66 349 2.7E-39 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS12985 cf15879f6835d6b8dbb9a16c645d403b 375 Gene3D G3DSA:3.40.710.10 52 361 1.1E-51 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS12985 cf15879f6835d6b8dbb9a16c645d403b 375 SUPERFAMILY SSF56601 40 347 6.22E-52 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS05045 f7baabb77d70f352cc33653f5ee56e31 258 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 6 249 6.9E-33 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS05045 f7baabb77d70f352cc33653f5ee56e31 258 Pfam PF02654 Cobalamin-5-phosphate synthase 10 250 7.0E-49 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS05045 f7baabb77d70f352cc33653f5ee56e31 258 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 258 42.095 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 S40542_RS17425 915a9a5299057934aac973102455a7e9 112 Pfam PF12487 Protein of unknown function (DUF3703) 4 109 2.4E-37 T 11-11-2016 IPR022172 Protein of unknown function DUF3703 S40542_RS07950 e01a01d34ab162d7e74643ece462b4c8 466 PIRSF PIRSF006603 8 465 1.1E-82 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS07950 e01a01d34ab162d7e74643ece462b4c8 466 Pfam PF01554 MatE 264 417 4.9E-19 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS07950 e01a01d34ab162d7e74643ece462b4c8 466 Pfam PF01554 MatE 33 193 3.5E-25 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS07950 e01a01d34ab162d7e74643ece462b4c8 466 TIGRFAM TIGR00797 matE: MATE efflux family protein 33 422 1.2E-56 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS13710 02369fade17d3dc40e21fdba0b1f7be8 726 Gene3D G3DSA:2.170.130.10 28 156 3.0E-28 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS13710 02369fade17d3dc40e21fdba0b1f7be8 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 153 3.6E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 S40542_RS13710 02369fade17d3dc40e21fdba0b1f7be8 726 SUPERFAMILY SSF56935 29 725 7.94E-101 T 11-11-2016 S40542_RS13710 02369fade17d3dc40e21fdba0b1f7be8 726 Pfam PF00593 TonB dependent receptor 488 725 3.6E-18 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS13710 02369fade17d3dc40e21fdba0b1f7be8 726 Gene3D G3DSA:2.40.170.20 157 725 1.9E-72 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 S40542_RS07240 182a614c339aed1002d1489bf3a671a3 324 Pfam PF00144 Beta-lactamase 2 302 3.4E-53 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS07240 182a614c339aed1002d1489bf3a671a3 324 Gene3D G3DSA:3.40.710.10 2 294 2.7E-66 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS07240 182a614c339aed1002d1489bf3a671a3 324 SUPERFAMILY SSF56601 2 292 1.35E-64 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS03855 5dd795059020790251a86b2b8993389c 202 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 111 187 6.0E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS03855 5dd795059020790251a86b2b8993389c 202 SUPERFAMILY SSF74653 104 185 1.96E-22 T 11-11-2016 S40542_RS03855 5dd795059020790251a86b2b8993389c 202 Gene3D G3DSA:3.30.1150.10 78 188 4.8E-16 T 11-11-2016 S40542_RS03855 5dd795059020790251a86b2b8993389c 202 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 109 186 6.9E-21 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS07880 f6f01490bfd3e1d534d638a538d5343c 346 SUPERFAMILY SSF56281 77 307 9.88E-34 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS07880 f6f01490bfd3e1d534d638a538d5343c 346 Pfam PF12706 Beta-lactamase superfamily domain 97 289 4.7E-40 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS07880 f6f01490bfd3e1d534d638a538d5343c 346 Gene3D G3DSA:3.60.15.10 37 340 9.5E-91 T 11-11-2016 IPR001279 Metallo-beta-lactamase S40542_RS16700 fb2781380994771c45f48ec72d67d573 954 SUPERFAMILY SSF49478 791 850 4.71E-7 T 11-11-2016 S40542_RS16700 fb2781380994771c45f48ec72d67d573 954 Gene3D G3DSA:2.60.40.10 790 841 4.7E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS13630 899b61f8a35311c03578280b3c443d3a 148 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 105 148 0.006 T 11-11-2016 S40542_RS13630 899b61f8a35311c03578280b3c443d3a 148 Pfam PF04191 Phospholipid methyltransferase 36 137 2.7E-15 T 11-11-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 S40542_RS13280 a0889675e2a7d446e9eeff22df360b72 157 Pfam PF00583 Acetyltransferase (GNAT) family 48 134 7.5E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS13280 a0889675e2a7d446e9eeff22df360b72 157 Gene3D G3DSA:3.40.630.30 1 152 9.4E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13280 a0889675e2a7d446e9eeff22df360b72 157 SUPERFAMILY SSF55729 33 142 1.77E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS11580 a545298633997d823bbfb29d570d6e47 1610 Gene3D G3DSA:3.40.50.720 941 1052 7.1E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11580 a545298633997d823bbfb29d570d6e47 1610 Gene3D G3DSA:3.40.50.720 1087 1179 7.1E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11580 a545298633997d823bbfb29d570d6e47 1610 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1600 0.0 T 11-11-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 S40542_RS11580 a545298633997d823bbfb29d570d6e47 1610 PIRSF PIRSF036761 1 1607 0.0 T 11-11-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 S40542_RS11580 a545298633997d823bbfb29d570d6e47 1610 SUPERFAMILY SSF53223 755 955 1.63E-26 T 11-11-2016 S40542_RS11580 a545298633997d823bbfb29d570d6e47 1610 SUPERFAMILY SSF51735 1082 1217 7.88E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS11580 a545298633997d823bbfb29d570d6e47 1610 SUPERFAMILY SSF51735 944 1046 7.88E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS05230 7a9072b8c1cf575fd569ecd971839334 144 Gene3D G3DSA:3.40.190.10 26 139 9.2E-11 T 11-11-2016 S40542_RS05230 7a9072b8c1cf575fd569ecd971839334 144 SUPERFAMILY SSF53850 19 139 4.99E-13 T 11-11-2016 S40542_RS14330 381722867f1f16a59dbb460adc320934 269 Pfam PF11207 Protein of unknown function (DUF2989) 18 218 7.0E-65 T 11-11-2016 IPR021372 Protein of unknown function DUF2989 S40542_RS04605 aacc884a476931afa1249d49c0c881fc 202 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 113 187 3.7E-13 T 11-11-2016 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal S40542_RS11490 63a2c3d7b39e2b00b717a2e1e1005d96 925 Gene3D G3DSA:3.40.1140.10 825 899 1.4E-5 T 11-11-2016 S40542_RS11490 63a2c3d7b39e2b00b717a2e1e1005d96 925 Gene3D G3DSA:3.40.1140.10 7 115 1.4E-5 T 11-11-2016 S40542_RS18440 ae60d6d1b876d952ab20c9a84fb0303a 72 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 4 64 7.0E-18 T 11-11-2016 IPR020137 Uncharacterised protein family HI1736 S40542_RS18440 ae60d6d1b876d952ab20c9a84fb0303a 72 Pfam PF10688 Bacterial inner membrane protein 3 70 1.0E-7 T 11-11-2016 IPR019629 Uncharacterised protein family HI1736/YgjV S40542_RS12215 52617acf91ea012682283847d795d3d5 108 Pfam PF07238 PilZ domain 5 81 5.1E-9 T 11-11-2016 IPR009875 PilZ domain GO:0035438 S40542_RS10690 2249230fb23db930ad74479b3a255589 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 8 455 2.6E-92 T 11-11-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 S40542_RS24950 d35de1fe08e0af9c6cf5207b87301c3c 163 Pfam PF11849 Domain of unknown function (DUF3369) 2 124 8.2E-19 T 11-11-2016 IPR021800 Domain of unknown function DUF3369 S40542_RS12000 79449e3c8f3d02a428926714846bb31a 171 Pfam PF02357 Transcription termination factor nusG 6 99 9.3E-16 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 S40542_RS12000 79449e3c8f3d02a428926714846bb31a 171 Gene3D G3DSA:3.30.70.940 6 104 3.4E-12 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 S40542_RS12000 79449e3c8f3d02a428926714846bb31a 171 SMART SM00738 4 103 4.2E-5 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 S40542_RS12000 79449e3c8f3d02a428926714846bb31a 171 SUPERFAMILY SSF82679 6 105 1.31E-20 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 S40542_RS06390 2f85d36ea0779cd01c0bd2e6dfe6c44d 148 Pfam PF02050 Flagellar FliJ protein 20 141 1.3E-30 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 S40542_RS06390 2f85d36ea0779cd01c0bd2e6dfe6c44d 148 PIRSF PIRSF019404 1 146 1.5E-29 T 11-11-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 S40542_RS06390 2f85d36ea0779cd01c0bd2e6dfe6c44d 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 143 5.0E-28 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 S40542_RS06390 2f85d36ea0779cd01c0bd2e6dfe6c44d 148 PRINTS PR01004 Flagellar FliJ protein signature 125 145 2.4E-5 T 11-11-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 S40542_RS06390 2f85d36ea0779cd01c0bd2e6dfe6c44d 148 PRINTS PR01004 Flagellar FliJ protein signature 62 83 2.4E-5 T 11-11-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 S40542_RS06390 2f85d36ea0779cd01c0bd2e6dfe6c44d 148 PRINTS PR01004 Flagellar FliJ protein signature 43 60 2.4E-5 T 11-11-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 S40542_RS10295 85d9244165264bfe52de610c01d6c7bd 296 Pfam PF13737 Transposase DDE domain 16 127 2.1E-40 T 11-11-2016 IPR025668 Transposase DDE domain S40542_RS07225 2dc9b971aab43340c0745c00be078629 225 Pfam PF14329 Domain of unknown function (DUF4386) 9 214 3.8E-29 T 11-11-2016 IPR025495 Protein of unknown function DUF4386 S40542_RS04765 67d76e063b15f144301093f4597aa0b6 131 Pfam PF03748 Flagellar basal body-associated protein FliL 28 129 2.3E-16 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 S40542_RS19935 783915313a83ccd9ce2a4e615beb3d71 396 SUPERFAMILY SSF103473 12 388 1.44E-30 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS19935 783915313a83ccd9ce2a4e615beb3d71 396 Gene3D G3DSA:1.20.1250.20 16 191 5.3E-7 T 11-11-2016 S40542_RS19935 783915313a83ccd9ce2a4e615beb3d71 396 Gene3D G3DSA:1.20.1250.20 206 386 2.2E-17 T 11-11-2016 S40542_RS19935 783915313a83ccd9ce2a4e615beb3d71 396 Pfam PF07690 Major Facilitator Superfamily 80 347 6.2E-14 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS01935 a8e464124470978ac6225100b62893f1 331 Pfam PF02628 Cytochrome oxidase assembly protein 9 317 2.6E-73 T 11-11-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 S40542_RS16385 6cb8095ddccdbfae79a733e181ebe028 158 Pfam PF05954 Phage late control gene D protein (GPD) 8 143 1.4E-5 T 11-11-2016 S40542_RS15135 f50367ae33e6a6ab3003955018e0951e 223 Pfam PF04493 Endonuclease V 19 212 1.6E-73 T 11-11-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 S40542_RS15135 f50367ae33e6a6ab3003955018e0951e 223 Hamap MF_00801 Endonuclease V [nfi]. 9 221 33.653 T 11-11-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 S40542_RS06495 ceec0598c03a94152e97752f928ad3aa 141 Pfam PF10975 Protein of unknown function (DUF2802) 73 139 2.7E-23 T 11-11-2016 IPR021244 Protein of unknown function DUF2802 S40542_RS05020 9aaaf96618940a1e159f0150ad7ad061 70 Pfam PF04400 Protein of unknown function (DUF539) 22 63 2.8E-19 T 11-11-2016 IPR007495 (Na+)-NQR maturation factor NqrM S40542_RS04040 818dbd72ccb10c95aa8a411421d05d7e 192 Gene3D G3DSA:3.40.30.10 1 79 2.5E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS04040 818dbd72ccb10c95aa8a411421d05d7e 192 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 78 1.8E-15 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 S40542_RS04040 818dbd72ccb10c95aa8a411421d05d7e 192 SUPERFAMILY SSF52833 1 87 8.16E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS14485 f350a9a00922cd9e202cd7fea3912cb4 336 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 2.6E-93 T 11-11-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 S40542_RS18505 38a0eb8520a4a8b9d119ad9ff5febc2d 358 SUPERFAMILY SSF53756 29 349 8.16E-22 T 11-11-2016 S40542_RS18000 d8ca9dfb766484d51757d6d579929aee 195 SUPERFAMILY SSF53335 14 192 9.21E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18000 d8ca9dfb766484d51757d6d579929aee 195 Gene3D G3DSA:3.40.50.150 8 193 4.7E-66 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS18000 d8ca9dfb766484d51757d6d579929aee 195 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 5 192 1.0E-61 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS18000 d8ca9dfb766484d51757d6d579929aee 195 Pfam PF03602 Conserved hypothetical protein 95 14 190 1.7E-60 T 11-11-2016 S40542_RS18000 d8ca9dfb766484d51757d6d579929aee 195 PIRSF PIRSF004553 13 194 2.6E-57 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 S40542_RS18000 d8ca9dfb766484d51757d6d579929aee 195 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 128 134 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 S40542_RS12720 692a01f50ea3cca5725dd9c0158e1398 217 SUPERFAMILY SSF52540 4 183 1.32E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12720 692a01f50ea3cca5725dd9c0158e1398 217 Gene3D G3DSA:3.40.50.300 7 178 4.8E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase S40542_RS12720 692a01f50ea3cca5725dd9c0158e1398 217 Pfam PF13671 AAA domain 7 149 8.2E-7 T 11-11-2016 S40542_RS13770 f65a9c315646ca1097c9bae34fd9226a 139 SUPERFAMILY SSF54637 6 128 2.62E-35 T 11-11-2016 IPR029069 HotDog domain S40542_RS13770 f65a9c315646ca1097c9bae34fd9226a 139 Pfam PF07977 FabA-like domain 7 124 3.0E-23 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 S40542_RS13770 f65a9c315646ca1097c9bae34fd9226a 139 Gene3D G3DSA:3.10.129.10 7 127 1.0E-39 T 11-11-2016 IPR029069 HotDog domain S40542_RS16625 d72e4e50ae0fe9268a676d88a4f28007 120 PIRSF PIRSF028141 1 120 1.1E-43 T 11-11-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type S40542_RS16625 d72e4e50ae0fe9268a676d88a4f28007 120 SUPERFAMILY SSF141371 1 117 4.12E-33 T 11-11-2016 S40542_RS16625 d72e4e50ae0fe9268a676d88a4f28007 120 Pfam PF07238 PilZ domain 3 100 1.9E-15 T 11-11-2016 IPR009875 PilZ domain GO:0035438 S40542_RS16625 d72e4e50ae0fe9268a676d88a4f28007 120 Gene3D G3DSA:2.40.10.220 1 117 1.3E-42 T 11-11-2016 S40542_RS08990 950888cb4b66f4c5312204bfda1a17f5 229 SUPERFAMILY SSF103039 10 173 3.92E-22 T 11-11-2016 IPR028976 CheC-like domain S40542_RS08990 950888cb4b66f4c5312204bfda1a17f5 229 Pfam PF11813 Protein of unknown function (DUF3334) 3 229 1.3E-114 T 11-11-2016 IPR024513 Protein of unknown function DUF3334 S40542_RS08990 950888cb4b66f4c5312204bfda1a17f5 229 Gene3D G3DSA:3.40.1550.10 11 173 3.0E-12 T 11-11-2016 IPR028976 CheC-like domain S40542_RS17910 ee9f64db25877b20dee8ec111b712e5c 162 PIRSF PIRSF034445 2 159 7.1E-16 T 11-11-2016 IPR012899 LTXXQ motif family protein GO:0042597 S40542_RS17910 ee9f64db25877b20dee8ec111b712e5c 162 Pfam PF07813 LTXXQ motif family protein 56 147 7.6E-10 T 11-11-2016 IPR012899 LTXXQ motif family protein GO:0042597 S40542_RS20495 4e24c99b7a459f8ef6c21dcfad553f5a 546 Pfam PF01391 Collagen triple helix repeat (20 copies) 286 343 1.4E-8 T 11-11-2016 IPR008160 Collagen triple helix repeat S40542_RS20495 4e24c99b7a459f8ef6c21dcfad553f5a 546 Gene3D G3DSA:4.10.1080.10 139 208 4.7E-5 T 11-11-2016 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 S40542_RS05245 8ddb1bdf84d5c0de3be65f665eb45a41 273 Pfam PF09955 Predicted integral membrane protein (DUF2189) 57 173 7.7E-7 T 11-11-2016 IPR018692 Predicted integral membrane protein DUF2189 S40542_RS17520 b29ba7b31aa71285c3a6390fbfcf1002 150 Pfam PF01641 SelR domain 28 143 1.6E-46 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 S40542_RS17520 b29ba7b31aa71285c3a6390fbfcf1002 150 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 25 143 2.0E-47 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 S40542_RS17520 b29ba7b31aa71285c3a6390fbfcf1002 150 Gene3D G3DSA:2.170.150.20 20 144 1.3E-51 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 S40542_RS17520 b29ba7b31aa71285c3a6390fbfcf1002 150 SUPERFAMILY SSF51316 24 144 4.29E-50 T 11-11-2016 IPR011057 Mss4-like S40542_RS19160 c567fa42c0a7d21e364fd5e0dd9b5df4 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 118 1.0E-26 T 11-11-2016 IPR008249 Uncharacterised protein family UPF0231 S40542_RS19160 c567fa42c0a7d21e364fd5e0dd9b5df4 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 118 1.8E-26 T 11-11-2016 IPR008249 Uncharacterised protein family UPF0231 S40542_RS16205 7d3ef2de1a1c43d068ad0dc45634da14 164 SUPERFAMILY SSF56235 4 137 7.21E-8 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS06760 819e467796acdc722c849b1b65f0e483 274 Gene3D G3DSA:1.25.40.10 44 106 6.6E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS12805 695c3e0f9787f77c5b6ba8e6432eb952 403 SUPERFAMILY SSF56601 58 389 3.06E-55 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS12805 695c3e0f9787f77c5b6ba8e6432eb952 403 Gene3D G3DSA:3.40.710.10 99 399 9.0E-32 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like S40542_RS12805 695c3e0f9787f77c5b6ba8e6432eb952 403 Pfam PF00144 Beta-lactamase 99 387 1.0E-19 T 11-11-2016 IPR001466 Beta-lactamase-related S40542_RS01310 f01dd9f5beb3dd26079cc83eaafea535 179 Pfam PF05036 Sporulation related domain 102 167 1.1E-13 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS01310 f01dd9f5beb3dd26079cc83eaafea535 179 Gene3D G3DSA:3.30.70.1070 101 177 6.8E-23 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS01310 f01dd9f5beb3dd26079cc83eaafea535 179 SUPERFAMILY SSF110997 101 176 1.57E-17 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 S40542_RS12355 a43f4bec3a9c48c7abec3f58d99fb931 157 SUPERFAMILY SSF53927 6 148 2.68E-36 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 S40542_RS12355 a43f4bec3a9c48c7abec3f58d99fb931 157 PIRSF PIRSF006019 1 156 3.4E-48 T 11-11-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-500753 S40542_RS12355 a43f4bec3a9c48c7abec3f58d99fb931 157 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 78 113 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 S40542_RS12355 a43f4bec3a9c48c7abec3f58d99fb931 157 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 123 1.1E-27 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 S40542_RS12355 a43f4bec3a9c48c7abec3f58d99fb931 157 Gene3D G3DSA:3.40.140.10 4 150 7.8E-41 T 11-11-2016 S40542_RS03645 ac58f074e0064a235fd6c1ec59c8abc5 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 230 3.9E-75 T 11-11-2016 IPR005224 Sugar fermentation stimulation protein S40542_RS03645 ac58f074e0064a235fd6c1ec59c8abc5 235 Pfam PF03749 Sugar fermentation stimulation protein 13 225 2.1E-73 T 11-11-2016 IPR005224 Sugar fermentation stimulation protein S40542_RS03645 ac58f074e0064a235fd6c1ec59c8abc5 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 54.515 T 11-11-2016 IPR005224 Sugar fermentation stimulation protein S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 Gene3D G3DSA:3.50.50.60 690 740 8.5E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 Gene3D G3DSA:3.50.50.60 380 448 8.5E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 Gene3D G3DSA:3.50.50.60 3 47 8.5E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 SUPERFAMILY SSF51905 5 73 2.2E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 SUPERFAMILY SSF51905 491 511 2.2E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 SUPERFAMILY SSF51905 309 427 2.2E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 SUPERFAMILY SSF51905 664 733 2.2E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 SUPERFAMILY SSF51905 106 148 2.2E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS11710 f0cfcc5ad68a7ba6bbff3be9df6b43a5 748 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 84 3.3E-10 T 11-11-2016 S40542_RS08270 b99e0d3c5dd4af46b2cd70512aaa6263 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 253 1.2E-20 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS08270 b99e0d3c5dd4af46b2cd70512aaa6263 268 SMART SM00062 31 264 0.0072 T 11-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF S40542_RS08270 b99e0d3c5dd4af46b2cd70512aaa6263 268 SUPERFAMILY SSF53850 30 249 1.74E-26 T 11-11-2016 S40542_RS08270 b99e0d3c5dd4af46b2cd70512aaa6263 268 Gene3D G3DSA:3.40.190.10 12 157 6.2E-16 T 11-11-2016 S40542_RS11225 1d51b4afa6adab577dc0434457b31673 100 Gene3D G3DSA:3.30.70.900 6 99 1.5E-14 T 11-11-2016 S40542_RS11225 1d51b4afa6adab577dc0434457b31673 100 Pfam PF07045 Domain of unknown function (DUF1330) 8 97 1.0E-9 T 11-11-2016 IPR010753 Domain of unknown function DUF1330 S40542_RS11225 1d51b4afa6adab577dc0434457b31673 100 SUPERFAMILY SSF54909 1 98 1.15E-16 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel S40542_RS14470 f0c1629fc3ee6640bb57c314e8f0a33e 572 Gene3D G3DSA:1.25.40.10 213 249 5.5E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14470 f0c1629fc3ee6640bb57c314e8f0a33e 572 Gene3D G3DSA:1.25.40.10 38 96 5.5E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14470 f0c1629fc3ee6640bb57c314e8f0a33e 572 SUPERFAMILY SSF48452 38 102 2.39E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS14470 f0c1629fc3ee6640bb57c314e8f0a33e 572 SUPERFAMILY SSF48452 204 245 2.39E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS07375 0b2b1cafff49a28aaaed010a4a2dd343 248 SUPERFAMILY SSF52317 25 245 2.88E-46 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS07375 0b2b1cafff49a28aaaed010a4a2dd343 248 Gene3D G3DSA:3.40.50.880 24 245 2.4E-49 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS18235 14d8cb7a619035f2d03d66e951af1eaf 95 Pfam PF05164 Cell division protein ZapA 8 89 1.1E-17 T 11-11-2016 IPR007838 Cell division protein ZapA-like S40542_RS18235 14d8cb7a619035f2d03d66e951af1eaf 95 SUPERFAMILY SSF102829 7 93 1.31E-16 T 11-11-2016 IPR007838 Cell division protein ZapA-like S40542_RS03175 8b58550f13254d9d7469a48daa310473 296 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 133 6.2E-32 T 11-11-2016 IPR010627 Peptidase A24A, N-terminal S40542_RS03175 8b58550f13254d9d7469a48daa310473 296 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 209 219 8.6E-24 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial S40542_RS03175 8b58550f13254d9d7469a48daa310473 296 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 232 247 8.6E-24 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial S40542_RS03175 8b58550f13254d9d7469a48daa310473 296 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 152 169 8.6E-24 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial S40542_RS03175 8b58550f13254d9d7469a48daa310473 296 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 220 231 8.6E-24 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial S40542_RS03175 8b58550f13254d9d7469a48daa310473 296 Pfam PF01478 Type IV leader peptidase family 143 251 1.3E-23 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 S40542_RS18175 3f092f32aafe5d74f1c455b744e3751c 422 Pfam PF01384 Phosphate transporter family 26 409 1.1E-122 T 11-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 S40542_RS07620 a11fc16f63fab5a665a4fc9a05a52ad4 323 Gene3D G3DSA:3.30.70.1290 16 82 4.2E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07620 a11fc16f63fab5a665a4fc9a05a52ad4 323 Gene3D G3DSA:3.30.70.1290 135 190 4.2E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07620 a11fc16f63fab5a665a4fc9a05a52ad4 323 SUPERFAMILY SSF143422 15 81 6.8E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07620 a11fc16f63fab5a665a4fc9a05a52ad4 323 SUPERFAMILY SSF143422 134 193 6.8E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS07620 a11fc16f63fab5a665a4fc9a05a52ad4 323 SMART SM01321 12 187 0.0013 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS16715 5f1f87555da072466dd622f40617ec96 198 Pfam PF14352 Domain of unknown function (DUF4402) 42 198 4.2E-10 T 11-11-2016 IPR025514 Protein of unknown function DUF4402 S40542_RS13515 8c0caa3bea352b0d4a3ca4ce6992ed32 323 ProSitePatterns PS00018 EF-hand calcium-binding domain. 281 293 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site S40542_RS10840 1bbdee98b7977cbadba62639de1a7acd 252 SUPERFAMILY SSF54060 60 139 4.36E-8 T 11-11-2016 S40542_RS15500 7e2aa1316562a28461135d9c0bc6264d 324 Pfam PF04116 Fatty acid hydroxylase superfamily 125 272 1.2E-23 T 11-11-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 S40542_RS20190 2646acb8263c3e7c45fdfedd79ce6140 127 Gene3D G3DSA:1.20.120.550 2 127 4.9E-17 T 11-11-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain S40542_RS20190 2646acb8263c3e7c45fdfedd79ce6140 127 Pfam PF01124 MAPEG family 5 127 8.7E-21 T 11-11-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein S40542_RS20190 2646acb8263c3e7c45fdfedd79ce6140 127 SUPERFAMILY SSF161084 4 125 1.83E-25 T 11-11-2016 S40542_RS16525 a9c7963a01fb1143f918c7f8113e7afc 304 Gene3D G3DSA:2.160.20.10 56 104 3.1E-5 T 11-11-2016 IPR012334 Pectin lyase fold S40542_RS05840 c9b3c6d3e0ba8b60bf9f6ed6870071d6 212 PIRSF PIRSF006324 1 212 1.6E-59 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS05840 c9b3c6d3e0ba8b60bf9f6ed6870071d6 212 Pfam PF01810 LysE type translocator 16 212 2.2E-31 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS11160 f337e6b8eaf304436d4934f691f4adf0 165 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-11-2016 IPR030489 Transcription regulator Rrf2-type, conserved site S40542_RS11160 f337e6b8eaf304436d4934f691f4adf0 165 Gene3D G3DSA:1.10.10.10 1 143 8.7E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11160 f337e6b8eaf304436d4934f691f4adf0 165 SUPERFAMILY SSF46785 3 139 8.68E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain S40542_RS11160 f337e6b8eaf304436d4934f691f4adf0 165 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 138 3.7E-24 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type S40542_RS11160 f337e6b8eaf304436d4934f691f4adf0 165 Pfam PF02082 Transcriptional regulator 1 82 2.8E-19 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type S40542_RS08560 8eeaee4e9ffdfdc720e7ec61c4768247 406 SUPERFAMILY SSF51905 280 372 2.42E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08560 8eeaee4e9ffdfdc720e7ec61c4768247 406 SUPERFAMILY SSF51905 6 181 2.42E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08560 8eeaee4e9ffdfdc720e7ec61c4768247 406 Gene3D G3DSA:3.50.50.60 275 319 1.0E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08560 8eeaee4e9ffdfdc720e7ec61c4768247 406 Gene3D G3DSA:3.50.50.60 5 175 1.0E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 S40542_RS08560 8eeaee4e9ffdfdc720e7ec61c4768247 406 Pfam PF04820 Tryptophan halogenase 92 314 4.3E-13 T 11-11-2016 IPR006905 Tryptophan halogenase S40542_RS08560 8eeaee4e9ffdfdc720e7ec61c4768247 406 Pfam PF04820 Tryptophan halogenase 8 77 7.4E-8 T 11-11-2016 IPR006905 Tryptophan halogenase S40542_RS08560 8eeaee4e9ffdfdc720e7ec61c4768247 406 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 296 3.4E-5 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS08560 8eeaee4e9ffdfdc720e7ec61c4768247 406 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.4E-5 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 S40542_RS14770 2e80c59325b3abba8d1279387a426fcb 428 SUPERFAMILY SSF53300 251 417 3.84E-5 T 11-11-2016 IPR002035 von Willebrand factor, type A S40542_RS14770 2e80c59325b3abba8d1279387a426fcb 428 Pfam PF04285 Protein of unknown function (DUF444) 3 419 3.2E-186 T 11-11-2016 IPR006698 Uncharacterised protein family UPF0229 S40542_RS14770 2e80c59325b3abba8d1279387a426fcb 428 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 39.518 T 11-11-2016 IPR006698 Uncharacterised protein family UPF0229 S40542_RS14435 3d04cb95eff9658d72df7c89f8785123 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 9.3E-18 T 11-11-2016 IPR003772 Protein of unknown function DUF177 S40542_RS03260 82f858d951024b463f57e9803f1742f8 175 Pfam PF13689 Domain of unknown function (DUF4154) 26 170 7.4E-20 T 11-11-2016 IPR025293 Protein of unknown function DUF4154 S40542_RS04970 5a3fbd801d3e4525f294872651297cec 193 SUPERFAMILY SSF51197 9 192 9.2E-58 T 11-11-2016 S40542_RS04970 5a3fbd801d3e4525f294872651297cec 193 Gene3D G3DSA:2.60.120.590 10 192 2.0E-43 T 11-11-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like S40542_RS04970 5a3fbd801d3e4525f294872651297cec 193 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 12 190 3.7E-35 T 11-11-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like S40542_RS13740 4f689a22255492c6772e30d4775b90ff 170 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 37 155 1.4E-21 T 11-11-2016 IPR018673 Protein of unknown function DUF2141 S40542_RS03990 d8c5e13c5d892ba8f227546016a97f01 376 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 4 360 5.9E-160 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS03990 d8c5e13c5d892ba8f227546016a97f01 376 Gene3D G3DSA:3.20.20.70 108 323 2.3E-13 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 S40542_RS03990 d8c5e13c5d892ba8f227546016a97f01 376 Pfam PF04055 Radical SAM superfamily 111 281 5.8E-18 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 S40542_RS03990 d8c5e13c5d892ba8f227546016a97f01 376 PIRSF PIRSF006004 4 369 4.3E-146 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS03990 d8c5e13c5d892ba8f227546016a97f01 376 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 7 355 73.246 T 11-11-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 S40542_RS03990 d8c5e13c5d892ba8f227546016a97f01 376 SUPERFAMILY SSF102114 107 315 2.49E-12 T 11-11-2016 S40542_RS20045 d18bf576e9fce84f340e19a176028c96 424 SMART SM00283 120 381 3.7E-47 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS20045 d18bf576e9fce84f340e19a176028c96 424 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 185 377 2.2E-40 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 S40542_RS20045 d18bf576e9fce84f340e19a176028c96 424 SUPERFAMILY SSF58104 91 382 2.75E-60 T 11-11-2016 S40542_RS20045 d18bf576e9fce84f340e19a176028c96 424 Gene3D G3DSA:1.10.287.950 136 348 1.2E-49 T 11-11-2016 S40542_RS20045 d18bf576e9fce84f340e19a176028c96 424 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 247 276 4.2E-7 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS20045 d18bf576e9fce84f340e19a176028c96 424 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 148 177 4.2E-7 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 S40542_RS01805 bef8d1ac13bd0af6df4c4c8c79f34a0a 187 Pfam PF05128 Domain of unknown function (DUF697) 31 167 3.6E-10 T 11-11-2016 IPR021147 Protein of unknown function DUF697 S40542_RS18055 3a3fe6d98e4bce5f451fe64342673970 270 Pfam PF10977 Protein of unknown function (DUF2797) 35 266 5.7E-98 T 11-11-2016 IPR021246 Protein of unknown function DUF2797 S40542_RS08605 f22546f5a3f92f183905aecf7118c81c 252 SUPERFAMILY SSF51621 3 245 1.61E-58 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS08605 f22546f5a3f92f183905aecf7118c81c 252 Pfam PF13714 Phosphoenolpyruvate phosphomutase 3 236 4.7E-71 T 11-11-2016 S40542_RS08605 f22546f5a3f92f183905aecf7118c81c 252 Gene3D G3DSA:3.20.20.60 2 222 2.3E-60 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 S40542_RS09850 cfe2aab2c5ac3551630de52e8d8c56dd 194 Pfam PF02517 CAAX protease self-immunity 42 124 3.2E-12 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 S40542_RS04015 c1dc97260e6f88f961ba07e6e67032ce 204 Gene3D G3DSA:1.25.40.10 86 188 1.2E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS04015 c1dc97260e6f88f961ba07e6e67032ce 204 PIRSF PIRSF006170 1 204 1.2E-51 T 11-11-2016 IPR026039 Uncharacterised protein family UPF0070 S40542_RS04015 c1dc97260e6f88f961ba07e6e67032ce 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 200 5.2E-53 T 11-11-2016 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 S40542_RS04015 c1dc97260e6f88f961ba07e6e67032ce 204 SUPERFAMILY SSF48452 85 186 1.35E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 S40542_RS16740 1396a90ecf5fe67552338a1de136a770 166 Pfam PF04214 Protein of unknown function, DUF 68 133 7.5E-24 T 11-11-2016 IPR007332 Protein of unknown function DUF411 S40542_RS16640 908540f429a9d37a8dfc9ae0ec62f711 389 SUPERFAMILY SSF52440 174 280 4.03E-39 T 11-11-2016 IPR016185 Pre-ATP-grasp domain S40542_RS16640 908540f429a9d37a8dfc9ae0ec62f711 389 SUPERFAMILY SSF56059 267 386 4.59E-89 T 11-11-2016 S40542_RS16640 908540f429a9d37a8dfc9ae0ec62f711 389 SUPERFAMILY SSF56059 1 169 4.59E-89 T 11-11-2016 S40542_RS16640 908540f429a9d37a8dfc9ae0ec62f711 389 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 387 2.3E-156 T 11-11-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain S40542_RS20405 d827c59facc8d7ab2a6ae77657a47292 164 Pfam PF04304 Protein of unknown function (DUF454) 11 122 2.3E-32 T 11-11-2016 IPR007401 Protein of unknown function DUF454 S40542_RS12015 7a9bb63171504ae80cab77012b7bb30d 356 Pfam PF11281 Protein of unknown function (DUF3083) 41 354 9.5E-123 T 11-11-2016 IPR021433 Protein of unknown function DUF3083 S40542_RS16630 1f3c7bd54d23fa633033c3868d23822e 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 67 1.0E-12 T 11-11-2016 IPR007140 Protein of unknown function DUF350 S40542_RS16630 1f3c7bd54d23fa633033c3868d23822e 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 132 1.8E-14 T 11-11-2016 IPR007140 Protein of unknown function DUF350 S40542_RS04520 0b62484a658fc17c5e6c171fbe40c5be 609 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 598 2.9E-180 T 11-11-2016 IPR010281 Protein of unknown function DUF885 S40542_RS03860 71d01c3085a7e606cc641bed36cc44c6 509 Pfam PF03929 PepSY-associated TM region 12 371 3.6E-39 T 11-11-2016 IPR005625 PepSY-associated TM protein S40542_RS16310 47c7024bd87fd6e7809420bd97b1eb5c 402 SUPERFAMILY SSF103473 16 394 6.8E-41 T 11-11-2016 IPR020846 Major facilitator superfamily domain S40542_RS16310 47c7024bd87fd6e7809420bd97b1eb5c 402 Pfam PF07690 Major Facilitator Superfamily 21 356 3.5E-29 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 S40542_RS16310 47c7024bd87fd6e7809420bd97b1eb5c 402 Gene3D G3DSA:1.20.1250.20 219 399 2.2E-13 T 11-11-2016 S40542_RS16310 47c7024bd87fd6e7809420bd97b1eb5c 402 Gene3D G3DSA:1.20.1250.20 15 196 5.8E-23 T 11-11-2016 S40542_RS03700 82feb14b89ef119edce2f3a894a5ee9a 387 SUPERFAMILY SSF56935 84 387 1.25E-34 T 11-11-2016 S40542_RS03700 82feb14b89ef119edce2f3a894a5ee9a 387 SUPERFAMILY SSF56935 25 54 1.25E-34 T 11-11-2016 S40542_RS13965 8cd062400615955eb20ee5f5f2ad4469 152 Pfam PF06271 RDD family 16 142 1.2E-27 T 11-11-2016 IPR010432 RDD S40542_RS09340 87a86adc1afd5b4c4ab5391db8a977be 137 Pfam PF16108 Domain of unknown function (DUF4826) 10 132 2.0E-41 T 11-11-2016 IPR032251 Protein of unknown function DUF4826 S40542_RS14925 1d55b6f0b4f9a608e721d0ef44614543 454 Pfam PF01618 MotA/TolQ/ExbB proton channel family 318 437 2.4E-28 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 S40542_RS14925 1d55b6f0b4f9a608e721d0ef44614543 454 PIRSF PIRSF037714 3 454 2.7E-178 T 11-11-2016 IPR017270 Putative MotA/TolQ/ExbB family protein S40542_RS06235 5c8413fd981889e52771dfef1e41d2da 411 Pfam PF13489 Methyltransferase domain 114 252 6.4E-15 T 11-11-2016 S40542_RS06235 5c8413fd981889e52771dfef1e41d2da 411 SUPERFAMILY SSF53335 117 261 1.37E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS06235 5c8413fd981889e52771dfef1e41d2da 411 Gene3D G3DSA:3.40.50.150 117 258 3.7E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase S40542_RS06235 5c8413fd981889e52771dfef1e41d2da 411 Pfam PF08421 Putative zinc binding domain 21 81 1.7E-8 T 11-11-2016 IPR013630 Methyltransferase putative zinc binding domain S40542_RS14535 ccbc5e5fccbae2e746cf78207064efb4 303 SUPERFAMILY SSF53187 42 263 5.95E-32 T 11-11-2016 S40542_RS14535 ccbc5e5fccbae2e746cf78207064efb4 303 Gene3D G3DSA:3.40.630.10 12 210 1.0E-58 T 11-11-2016 S40542_RS14535 ccbc5e5fccbae2e746cf78207064efb4 303 Gene3D G3DSA:3.40.630.10 247 301 1.0E-58 T 11-11-2016 S40542_RS14535 ccbc5e5fccbae2e746cf78207064efb4 303 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 76 175 8.6E-7 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 S40542_RS06415 5d618f557d4607ac72931b85293f29b8 123 Pfam PF04347 Flagellar biosynthesis protein, FliO 41 115 1.4E-16 T 11-11-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 S40542_RS06415 5d618f557d4607ac72931b85293f29b8 123 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 29 95 8.6E-22 T 11-11-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 S40542_RS12410 e13742cc91d6f26fe7b307d2ea577cb4 279 Gene3D G3DSA:3.90.550.10 58 101 4.9E-9 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS12410 e13742cc91d6f26fe7b307d2ea577cb4 279 Gene3D G3DSA:3.90.550.10 133 245 4.9E-9 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS12410 e13742cc91d6f26fe7b307d2ea577cb4 279 SUPERFAMILY SSF53448 29 106 1.67E-14 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS12410 e13742cc91d6f26fe7b307d2ea577cb4 279 SUPERFAMILY SSF53448 133 214 1.67E-14 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS18300 100fc3c9bca5510fead6b8c63767d31e 176 Pfam PF01625 Peptide methionine sulfoxide reductase 7 157 1.1E-64 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS18300 100fc3c9bca5510fead6b8c63767d31e 176 SUPERFAMILY SSF55068 3 167 5.1E-75 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS18300 100fc3c9bca5510fead6b8c63767d31e 176 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 161 37.22 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS18300 100fc3c9bca5510fead6b8c63767d31e 176 Gene3D G3DSA:3.30.1060.10 3 156 9.7E-73 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS18300 100fc3c9bca5510fead6b8c63767d31e 176 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 156 1.0E-64 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 S40542_RS18985 61d0ae06eca1c6447038e7854279eac2 181 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 177 2.4E-47 T 11-11-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 S40542_RS18985 61d0ae06eca1c6447038e7854279eac2 181 Pfam PF02470 MlaD protein 39 117 7.1E-15 T 11-11-2016 IPR003399 Mce/MlaD S40542_RS10125 2b8ad544e20a5d007cdf3a3d16d2ba00 334 Pfam PF07007 Protein of unknown function (DUF1311) 24 97 4.6E-5 T 11-11-2016 IPR009739 Protein of unknown function DUF1311 S40542_RS14135 3f7ef7a0f4cdb7f6f9fd0bd422f3c239 172 Pfam PF03929 PepSY-associated TM region 9 163 8.5E-15 T 11-11-2016 IPR005625 PepSY-associated TM protein S40542_RS19325 1703917295fbc3ac983ac3b94a79dc74 68 Pfam PF04024 PspC domain 14 62 5.3E-9 T 11-11-2016 IPR007168 Phage shock protein, PspC, N-terminal S40542_RS24005 718fbf650e33c8ee75acbe0e71c46e96 133 Pfam PF01061 ABC-2 type transporter 3 132 5.0E-13 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 S40542_RS10455 f78672e928516db24cded7e6cc3ed879 163 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 14 69 1.1E-4 T 11-11-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 S40542_RS14365 dec62639517dcdd0b151ebacae5026cf 254 Gene3D G3DSA:3.60.20.10 1 251 2.2E-67 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS14365 dec62639517dcdd0b151ebacae5026cf 254 Pfam PF13230 Glutamine amidotransferases class-II 1 252 2.0E-109 T 11-11-2016 IPR026869 Putative glutamine amidotransferase type 2 S40542_RS14365 dec62639517dcdd0b151ebacae5026cf 254 SUPERFAMILY SSF56235 2 252 3.52E-49 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal S40542_RS13575 390d87c784f1cf44613966272bd11710 387 Pfam PF05684 Protein of unknown function (DUF819) 10 387 3.4E-103 T 11-11-2016 IPR008537 Protein of unknown function DUF819 S40542_RS00390 0fabf4b1786176869c49a1acae6c82aa 798 Pfam PF12704 MacB-like periplasmic core domain 80 214 2.4E-8 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS19180 18045711ab1b144747e15631fa233c45 437 Pfam PF02667 Short chain fatty acid transporter 1 437 3.3E-141 T 11-11-2016 IPR006160 Short chain fatty acid transporter AtoE S40542_RS15865 5905faea0f4d40b548805b6f25346b28 311 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 101 2.1E-5 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 S40542_RS15865 5905faea0f4d40b548805b6f25346b28 311 SUPERFAMILY SSF51735 126 238 3.02E-10 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS15865 5905faea0f4d40b548805b6f25346b28 311 Pfam PF13602 Zinc-binding dehydrogenase 211 309 3.5E-13 T 11-11-2016 S40542_RS15865 5905faea0f4d40b548805b6f25346b28 311 Gene3D G3DSA:3.90.180.10 8 199 5.9E-32 T 11-11-2016 IPR011032 GroES-like S40542_RS15865 5905faea0f4d40b548805b6f25346b28 311 SMART SM00829 14 309 2.5E-8 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 S40542_RS15865 5905faea0f4d40b548805b6f25346b28 311 SUPERFAMILY SSF50129 5 152 1.35E-23 T 11-11-2016 IPR011032 GroES-like S40542_RS00450 4395a3120761144ddd383b2a50fcd71a 433 Pfam PF03600 Citrate transporter 21 308 5.0E-9 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 S40542_RS08685 3dd35ca3476b76f7d4cfbcf88b44524c 355 Pfam PF01594 Domain of unknown function DUF20 20 345 1.1E-67 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like S40542_RS17195 231a80cb6e3a8abef849e051c1e0fa27 244 SUPERFAMILY SSF55120 2 238 1.17E-58 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17195 231a80cb6e3a8abef849e051c1e0fa27 244 Pfam PF00849 RNA pseudouridylate synthase 10 170 8.4E-36 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS17195 231a80cb6e3a8abef849e051c1e0fa27 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 S40542_RS08535 6145a264cf9993cadf32e6464626ac50 276 Pfam PF04116 Fatty acid hydroxylase superfamily 97 229 8.6E-24 T 11-11-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 S40542_RS10415 fa7a73033eab87c2608f61d30c3be96a 148 SUPERFAMILY SSF46689 12 119 5.02E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS10415 fa7a73033eab87c2608f61d30c3be96a 148 Pfam PF08765 Mor transcription activator family 49 118 6.2E-10 T 11-11-2016 IPR014875 Mor transcription activator S40542_RS14300 1261869245be27fbef8b4ba5c790d308 894 Pfam PF03993 Domain of Unknown Function (DUF349) 552 623 1.3E-7 T 11-11-2016 IPR007139 Protein of unknown function DUF349 S40542_RS14300 1261869245be27fbef8b4ba5c790d308 894 Pfam PF03993 Domain of Unknown Function (DUF349) 626 692 1.6E-6 T 11-11-2016 IPR007139 Protein of unknown function DUF349 S40542_RS20400 35907cce9ead84b8345e2e0c89899285 201 Pfam PF01126 Heme oxygenase 13 189 9.5E-14 T 11-11-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 S40542_RS20400 35907cce9ead84b8345e2e0c89899285 201 Gene3D G3DSA:1.20.910.10 7 189 3.1E-57 T 11-11-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 S40542_RS20400 35907cce9ead84b8345e2e0c89899285 201 SUPERFAMILY SSF48613 11 189 1.91E-42 T 11-11-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 S40542_RS22720 1a40ecbec29fe1828f641c819f57bdcb 168 Gene3D G3DSA:2.60.40.10 135 168 1.9E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold S40542_RS22720 1a40ecbec29fe1828f641c819f57bdcb 168 Gene3D G3DSA:1.10.1060.10 2 59 1.7E-8 T 11-11-2016 S40542_RS22720 1a40ecbec29fe1828f641c819f57bdcb 168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site S40542_RS22720 1a40ecbec29fe1828f641c819f57bdcb 168 SUPERFAMILY SSF54862 2 124 1.17E-22 T 11-11-2016 S40542_RS22720 1a40ecbec29fe1828f641c819f57bdcb 168 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 135 168 8.5E-7 T 11-11-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain S40542_RS22720 1a40ecbec29fe1828f641c819f57bdcb 168 Gene3D G3DSA:3.30.70.20 60 94 4.7E-6 T 11-11-2016 S40542_RS22720 1a40ecbec29fe1828f641c819f57bdcb 168 Pfam PF13746 4Fe-4S dicluster domain 2 103 1.7E-41 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain S40542_RS09840 2db92d37f15770d5d32859e9b847f8fd 974 SUPERFAMILY SSF53187 61 108 1.12E-43 T 11-11-2016 S40542_RS09840 2db92d37f15770d5d32859e9b847f8fd 974 SUPERFAMILY SSF53187 139 365 1.12E-43 T 11-11-2016 S40542_RS09840 2db92d37f15770d5d32859e9b847f8fd 974 Gene3D G3DSA:3.40.630.10 65 288 4.0E-29 T 11-11-2016 S40542_RS09840 2db92d37f15770d5d32859e9b847f8fd 974 Pfam PF00246 Zinc carboxypeptidase 79 285 6.8E-23 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 S40542_RS09840 2db92d37f15770d5d32859e9b847f8fd 974 SUPERFAMILY SSF52317 650 736 5.49E-7 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS05945 3801a2b61be3b162507c677ab14e07e8 273 Pfam PF06629 MltA-interacting protein MipA 50 273 2.7E-28 T 11-11-2016 IPR010583 MltA-interacting MipA S40542_RS15470 3fcce8bc087b0bc25e63e1b0452ab439 129 Gene3D G3DSA:1.10.10.60 15 101 2.2E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS15470 3fcce8bc087b0bc25e63e1b0452ab439 129 SUPERFAMILY SSF46689 9 109 7.35E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 S40542_RS08205 9ab15e5f85cbc436bc8eacf53b76df20 402 Pfam PF05940 NnrS protein 20 396 3.2E-91 T 11-11-2016 IPR010266 NnrS S40542_RS14495 2897c0dee3ce06ce448a49e0100a513e 497 Pfam PF11893 Domain of unknown function (DUF3413) 9 253 5.0E-70 T 11-11-2016 IPR024588 Inner membrane protein YejM, N-terminal S40542_RS04165 ba690ebfee5d59207fbd0bb903d6c915 107 SUPERFAMILY SSF46626 13 105 4.3E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS04165 ba690ebfee5d59207fbd0bb903d6c915 107 Gene3D G3DSA:1.10.760.10 22 105 3.4E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS04165 ba690ebfee5d59207fbd0bb903d6c915 107 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 24 103 2.2E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 S40542_RS06045 3e2cd8ffff225aad971e4fd52c3e6efe 98 Pfam PF03334 Na+/H+ antiporter subunit 1 78 9.4E-24 T 11-11-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 S40542_RS06045 3e2cd8ffff225aad971e4fd52c3e6efe 98 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 2 85 3.9E-21 T 11-11-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 S40542_RS19920 4456d5086d2053ce59f360ec07add332 421 SUPERFAMILY SSF56935 240 399 5.55E-8 T 11-11-2016 S40542_RS19920 4456d5086d2053ce59f360ec07add332 421 SUPERFAMILY SSF56935 68 195 5.55E-8 T 11-11-2016 S40542_RS14480 dc4cb85e63447549bc6d9f89f1655ac0 331 Pfam PF02169 LPP20 lipoprotein 33 134 5.5E-7 T 11-11-2016 IPR024952 Lipoprotein LPP20-like S40542_RS03315 4bb19b02e53f8e935d8c2e24991479c1 124 Pfam PF12514 Protein of unknown function (DUF3718) 33 96 2.5E-20 T 11-11-2016 IPR022193 Protein of unknown function DUF3718 S40542_RS03915 d7dace999c1d0c5187bcb92f632463d7 116 Gene3D G3DSA:3.40.50.880 2 115 1.2E-29 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS03915 d7dace999c1d0c5187bcb92f632463d7 116 SUPERFAMILY SSF52317 2 114 1.97E-17 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 Gene3D G3DSA:2.40.50.100 87 101 4.4E-9 T 11-11-2016 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 Gene3D G3DSA:2.40.50.100 261 295 4.4E-9 T 11-11-2016 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 382 397 1.0E-21 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 1.0E-21 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 1.0E-21 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 355 1.0E-21 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 397 414 1.0E-21 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 332 1.0E-21 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 Gene3D G3DSA:2.40.50.100 48 86 1.3E-5 T 11-11-2016 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 Pfam PF13437 HlyD family secretion protein 264 385 5.3E-12 T 11-11-2016 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 ProSitePatterns PS00543 HlyD family secretion proteins signature. 382 404 - T 11-11-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 S40542_RS20605 5dfb4c1c1ebac219a43a78032154715f 414 SUPERFAMILY SSF51230 46 101 1.31E-5 T 11-11-2016 IPR011053 Single hybrid motif S40542_RS10855 369f7243c1466b2c21d4fce717e54335 145 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 27 133 2.5E-21 T 11-11-2016 IPR018673 Protein of unknown function DUF2141 S40542_RS14465 1379d78b48553255afafd30bbccd1362 192 Pfam PF02169 LPP20 lipoprotein 60 142 2.1E-6 T 11-11-2016 IPR024952 Lipoprotein LPP20-like S40542_RS07115 5a254cf5039a0bdbf2417bcfda4c9667 280 Pfam PF11227 Protein of unknown function (DUF3025) 56 266 1.7E-77 T 11-11-2016 IPR021390 Protein of unknown function DUF3025 S40542_RS04715 21bfa950888b03545cc5df664ef81849 479 Pfam PF14052 Capsule assembly protein Wzi 58 469 3.2E-29 T 11-11-2016 IPR026950 Capsule assembly protein Wzi S40542_RS24980 5481cd3efcf05fa5358217e604410606 87 Pfam PF02673 Bacitracin resistance protein BacA 1 86 3.0E-23 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 S40542_RS01725 08e5939df1823b366d40f84db5e39f3c 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 1.3E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS01725 08e5939df1823b366d40f84db5e39f3c 187 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 11 34 2.9E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site S40542_RS16600 66ddad8c54cc7b0fd0ca1bec3cfaeb86 135 Pfam PF11351 Holin of 3TMs, for gene-transfer release 20 122 3.2E-13 T 11-11-2016 IPR021497 Holin of 3TMs, for gene-transfer release S40542_RS07860 dd8e99c6b2e7d117507f510bdd878e22 210 Pfam PF01810 LysE type translocator 15 209 4.6E-31 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS07860 dd8e99c6b2e7d117507f510bdd878e22 210 PIRSF PIRSF006324 1 210 1.6E-44 T 11-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 S40542_RS11715 142dc20919f352eee5ba5ec968e89101 319 Gene3D G3DSA:2.40.400.10 20 158 2.9E-5 T 11-11-2016 IPR023375 Acetoacetate decarboxylase beta barrel domain KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 S40542_RS11715 142dc20919f352eee5ba5ec968e89101 319 SUPERFAMILY SSF160104 16 168 1.1E-9 T 11-11-2016 S40542_RS12635 2847f53a45a2b5037d3d31f3bf53942f 400 SUPERFAMILY SSF56219 35 392 1.14E-23 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS12635 2847f53a45a2b5037d3d31f3bf53942f 400 Gene3D G3DSA:3.60.10.10 132 392 2.1E-5 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS12635 2847f53a45a2b5037d3d31f3bf53942f 400 Gene3D G3DSA:3.60.10.10 35 97 2.1E-5 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS12635 2847f53a45a2b5037d3d31f3bf53942f 400 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 40 385 3.4E-34 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase S40542_RS14775 c1b8a5b8d1934036c9f44990246988d6 502 Pfam PF04293 SpoVR like protein 11 441 3.4E-176 T 11-11-2016 IPR007390 Sporulation stage V, protein R S40542_RS07925 727f2efdf88a88c6261f9acb27bc093a 200 TIGRFAM TIGR03650 violacein_E: violacein biosynthesis enzyme VioE 10 192 1.2E-93 T 11-11-2016 IPR019902 Violacein biosynthesis enzyme, VioE S40542_RS12395 48487d4ec9be54f4e9402e8e0a34fc24 294 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 281 5.1E-75 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 S40542_RS12395 48487d4ec9be54f4e9402e8e0a34fc24 294 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 16.121 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 S40542_RS12395 48487d4ec9be54f4e9402e8e0a34fc24 294 Pfam PF01040 UbiA prenyltransferase family 18 267 2.4E-52 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 S40542_RS01025 cc515599a73e525973ed4e8364b9c4af 477 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 447 8.0E-101 T 11-11-2016 IPR003846 Uncharacterised protein family UPF0061 S40542_RS00305 f57ebb640269cd6143b42ec8a93760a5 139 SUPERFAMILY SSF69118 15 138 1.2E-18 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 S40542_RS00305 f57ebb640269cd6143b42ec8a93760a5 139 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 60 5.8E-8 T 11-11-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 S40542_RS00305 f57ebb640269cd6143b42ec8a93760a5 139 Pfam PF02627 Carboxymuconolactone decarboxylase family 29 93 2.0E-8 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 S40542_RS00305 f57ebb640269cd6143b42ec8a93760a5 139 Gene3D G3DSA:1.20.1290.10 26 138 4.2E-20 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 S40542_RS09020 09bcf00689cce28873273864a4501f1f 375 Pfam PF16401 Domain of unknown function (DUF5009) 8 112 3.1E-6 T 11-11-2016 IPR032176 Domain of unknown function DUF5009 S40542_RS13935 ede3c142f42e94bd6943c46dfbb27b8b 68 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 62 8.0E-23 T 11-11-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system S40542_RS11090 3320615c7fd62ede0870d62ce123e885 280 Pfam PF10972 Peptidoglycan-binding protein, CsiV 10 278 1.2E-49 T 11-11-2016 IPR021241 Peptidoglycan-binding protein, CsiV S40542_RS22000 988fc1c51a16940b660092a102886322 91 SUPERFAMILY SSF51735 22 85 5.42E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS22000 988fc1c51a16940b660092a102886322 91 Gene3D G3DSA:3.40.50.720 22 89 1.3E-11 T 11-11-2016 IPR016040 NAD(P)-binding domain S40542_RS18615 14a1c4fd7552cf79106ef02d2d2a398a 326 Pfam PF13439 Glycosyltransferase Family 4 46 151 4.5E-7 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 S40542_RS18615 14a1c4fd7552cf79106ef02d2d2a398a 326 SUPERFAMILY SSF53756 43 325 6.28E-27 T 11-11-2016 S40542_RS12490 61600a078b8111989cb601bcd6bc708d 145 Gene3D G3DSA:3.40.630.30 1 143 1.7E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12490 61600a078b8111989cb601bcd6bc708d 145 SUPERFAMILY SSF55729 1 135 3.8E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS12490 61600a078b8111989cb601bcd6bc708d 145 Pfam PF00583 Acetyltransferase (GNAT) family 56 126 3.8E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS02455 c61b7d3ed62b0ba8db95146636156076 366 Pfam PF16537 Type II secretion system protein B 302 360 7.3E-20 T 11-11-2016 IPR032389 Type II secretion system protein B S40542_RS14835 a632e4eed3c0bb880069b15d431feb81 274 Pfam PF01925 Sulfite exporter TauE/SafE 16 268 4.8E-49 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 S40542_RS12495 05501c821c391eabc4a3b755e2763280 119 Gene3D G3DSA:3.30.1330.40 34 115 2.1E-16 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS12495 05501c821c391eabc4a3b755e2763280 119 Pfam PF01042 Endoribonuclease L-PSP 34 114 1.3E-13 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family S40542_RS12495 05501c821c391eabc4a3b755e2763280 119 SUPERFAMILY SSF55298 16 115 1.53E-18 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like S40542_RS20535 565f4f4fddb14072963ce302c4b03cce 419 Pfam PF13437 HlyD family secretion protein 236 325 3.3E-9 T 11-11-2016 S40542_RS20535 565f4f4fddb14072963ce302c4b03cce 419 SUPERFAMILY SSF111369 67 121 1.96E-8 T 11-11-2016 S40542_RS20535 565f4f4fddb14072963ce302c4b03cce 419 SUPERFAMILY SSF111369 212 279 1.96E-8 T 11-11-2016 S40542_RS20535 565f4f4fddb14072963ce302c4b03cce 419 SUPERFAMILY SSF111369 163 179 1.96E-8 T 11-11-2016 S40542_RS20535 565f4f4fddb14072963ce302c4b03cce 419 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 202 404 1.6E-31 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 S40542_RS20535 565f4f4fddb14072963ce302c4b03cce 419 Pfam PF13533 Biotin-lipoyl like 80 121 3.4E-5 T 11-11-2016 S40542_RS20535 565f4f4fddb14072963ce302c4b03cce 419 Gene3D G3DSA:2.40.50.100 83 108 2.9E-10 T 11-11-2016 S40542_RS20535 565f4f4fddb14072963ce302c4b03cce 419 Gene3D G3DSA:2.40.50.100 233 264 2.9E-10 T 11-11-2016 S40542_RS14740 369030864af53fbb9533b7a8669dd404 196 SUPERFAMILY SSF81342 9 193 1.49E-26 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 S40542_RS14740 369030864af53fbb9533b7a8669dd404 196 Pfam PF01292 Prokaryotic cytochrome b561 10 193 3.0E-29 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 S40542_RS14385 bc09e2d5ecd377f6d2b31d85e0c82488 623 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 613 2.7E-145 T 11-11-2016 IPR010281 Protein of unknown function DUF885 S40542_RS05580 f5f8e53efc3222b7873008e12ecf7886 190 Gene3D G3DSA:2.130.10.10 64 176 8.6E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 S40542_RS22900 7285016581f01f1b4308ea4be980270c 216 Gene3D G3DSA:3.20.20.220 4 169 3.0E-10 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like S40542_RS22900 7285016581f01f1b4308ea4be980270c 216 Pfam PF02219 Methylenetetrahydrofolate reductase 67 160 6.2E-5 T 11-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 S40542_RS22900 7285016581f01f1b4308ea4be980270c 216 SUPERFAMILY SSF51730 4 175 1.33E-21 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like S40542_RS10665 de8ed2298e78c977059341334580e557 315 SUPERFAMILY SSF103481 197 296 2.88E-6 T 11-11-2016 S40542_RS10665 de8ed2298e78c977059341334580e557 315 Pfam PF00892 EamA-like transporter family 165 292 5.5E-11 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 S40542_RS06565 1f5a6c7860a0dbd60611c627aee4e57b 158 Pfam PF03918 Cytochrome C biogenesis protein 11 147 2.1E-49 T 11-11-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family S40542_RS03330 b8021beae876c79c8fa77cecd5a6d978 213 Gene3D G3DSA:1.10.443.10 25 108 1.2E-4 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS03330 b8021beae876c79c8fa77cecd5a6d978 213 SUPERFAMILY SSF56349 23 119 3.24E-6 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS03425 a0cb6ee880450ce1e149b8e0bea0d26b 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 15 64 1.1E-13 T 11-11-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) S40542_RS03425 a0cb6ee880450ce1e149b8e0bea0d26b 68 SUPERFAMILY SSF46955 18 65 2.75E-6 T 11-11-2016 IPR009061 Putative DNA-binding domain S40542_RS18950 1d9f8ec8ece99ab63328281853fe8534 151 Pfam PF06295 Protein of unknown function (DUF1043) 10 139 2.9E-25 T 11-11-2016 IPR009386 Protein of unknown function DUF1043 S40542_RS07440 fee435a2fff6b7b9eb83bf4277fec072 437 SUPERFAMILY SSF55486 199 321 5.49E-6 T 11-11-2016 S40542_RS07940 fc050e44b3592e4bfdc3650c6aa8e91d 1011 Pfam PF12902 Ferritin-like 618 840 2.3E-34 T 11-11-2016 S40542_RS07940 fc050e44b3592e4bfdc3650c6aa8e91d 1011 TIGRFAM TIGR04492 VioB: iminophenyl-pyruvate dimer synthase VioB 1 1011 0.0 T 11-11-2016 IPR030993 Violacein biosynthesis protein VioB GO:0003824 S40542_RS19300 13584cdd9a698e43ea0d81e55ab194ff 289 Pfam PF10987 Protein of unknown function (DUF2806) 57 276 6.2E-70 T 11-11-2016 IPR021254 Protein of unknown function DUF2806 S40542_RS19300 13584cdd9a698e43ea0d81e55ab194ff 289 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 50 285 1.4E-84 T 11-11-2016 IPR021254 Protein of unknown function DUF2806 S40542_RS13625 9e3850823c1f179093b1316d69593f35 171 SUPERFAMILY SSF55729 2 163 3.81E-35 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS13625 9e3850823c1f179093b1316d69593f35 171 Pfam PF13302 Acetyltransferase (GNAT) domain 5 142 1.2E-25 T 11-11-2016 IPR000182 GNAT domain GO:0008080 S40542_RS13625 9e3850823c1f179093b1316d69593f35 171 Gene3D G3DSA:3.40.630.30 3 164 5.3E-37 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS02945 92567d467fccc558110fa92b0d380b3a 727 SUPERFAMILY SSF52317 112 179 1.72E-5 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS02945 92567d467fccc558110fa92b0d380b3a 727 SUPERFAMILY SSF52317 291 352 1.72E-5 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like S40542_RS19705 b643bebbc2a30ea0af182c2c1ea4c3ca 392 Pfam PF11301 Protein of unknown function (DUF3103) 53 391 4.7E-128 T 11-11-2016 IPR021452 Protein of unknown function DUF3103 S40542_RS12010 91b0166ca49be6d797e0a6da538d9020 413 SUPERFAMILY SSF52777 13 160 1.56E-10 T 11-11-2016 S40542_RS12010 91b0166ca49be6d797e0a6da538d9020 413 Pfam PF00668 Condensation domain 29 164 2.7E-5 T 11-11-2016 IPR001242 Condensation domain S40542_RS00525 793fdb46683525a3fd588c49431caaaa 590 Pfam PF05960 Bacterial protein of unknown function (DUF885) 60 579 6.8E-163 T 11-11-2016 IPR010281 Protein of unknown function DUF885 S40542_RS11775 70f31ab64244b6797353c85f357b48ac 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 1.3E-4 T 11-11-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 S40542_RS11775 70f31ab64244b6797353c85f357b48ac 92 Gene3D G3DSA:1.10.1220.10 51 88 8.1E-6 T 11-11-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 S40542_RS14100 359658439277ce9ee6e6690724e0ae14 284 Pfam PF01758 Sodium Bile acid symporter family 12 192 3.4E-31 T 11-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 S40542_RS03955 1a45547c70ce1379c486ec3d371bdd7f 122 Pfam PF10627 Curli assembly protein CsgE 20 118 3.0E-27 T 11-11-2016 IPR018900 Curli assembly protein CsgE S40542_RS18270 83ae3bdc76f67efb5bcd67fcb0c3cb76 177 Pfam PF07603 Protein of unknown function (DUF1566) 42 169 2.0E-29 T 11-11-2016 IPR011460 Protein of unknown function DUF1566 S40542_RS17230 e988ecc631279d749ab38f943d99eba4 257 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 2.2E-108 T 11-11-2016 IPR016908 Uncharacterised conserved protein UCP029037 S40542_RS17230 e988ecc631279d749ab38f943d99eba4 257 PIRSF PIRSF029037 1 257 1.0E-107 T 11-11-2016 IPR016908 Uncharacterised conserved protein UCP029037 S40542_RS09835 74027ae1d71a9ce15a037a14e7716d8f 123 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 7 120 1.0E-53 T 11-11-2016 IPR018714 Protein of unknown function DUF2237 S40542_RS20770 afd07f3f6d1c0c5e67421df2007dbe60 243 SUPERFAMILY SSF52833 121 237 4.23E-11 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS20770 afd07f3f6d1c0c5e67421df2007dbe60 243 Gene3D G3DSA:3.40.30.10 124 239 9.5E-12 T 11-11-2016 IPR012336 Thioredoxin-like fold S40542_RS05770 3c9928704ab85c1ff5a0579868cf5e80 292 Pfam PF04018 Domain of unknown function (DUF368) 1 243 1.1E-91 T 11-11-2016 IPR007163 Protein of unknown function DUF368 S40542_RS11120 9db8fc545d2a09c70b8e5cf25a80a40c 282 Gene3D G3DSA:2.150.10.10 60 169 4.7E-4 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS02860 4fbee29abff5563028b938cd1f3dc4fe 510 Pfam PF03806 AbgT putative transporter family 7 509 5.8E-120 T 11-11-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 S40542_RS14105 73bcf9bdf62e2ad315cfb078006434a5 288 SUPERFAMILY SSF51197 11 194 1.21E-7 T 11-11-2016 S40542_RS03720 7bf9f594f8b434ca2d3ba5fa7df64daa 2575 Pfam PF07603 Protein of unknown function (DUF1566) 2428 2575 6.2E-21 T 11-11-2016 IPR011460 Protein of unknown function DUF1566 S40542_RS09065 d5b7fc85ca6400448276c978a88e89ad 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 133 7.3E-29 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 S40542_RS16460 58458bbb35e599a030b04fcf4a97b0ec 189 Pfam PF12571 Phage tail-collar fibre protein 7 93 2.4E-9 T 11-11-2016 IPR022225 Phage tail fibre protein S40542_RS07025 5e871e074247822142128638365e2620 352 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 19 251 3.5E-62 T 11-11-2016 IPR018642 Protein of unknown function DUF2066 S40542_RS02750 53184a11296a93a291308be1e56bb0b8 286 SUPERFAMILY SSF82171 71 257 9.16E-7 T 11-11-2016 S40542_RS15560 12a321d8eb3818f11b02d51c7871b3de 61 Pfam PF11446 Protein of unknown function (DUF2897) 6 56 5.2E-13 T 11-11-2016 IPR021550 Protein of unknown function DUF2897 S40542_RS10270 956934d2a4eaa8e0caf1bc5cda53c680 312 Pfam PF03601 Conserved hypothetical protein 698 22 291 5.0E-53 T 11-11-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 S40542_RS16830 a992feb02df6cf4dda90884dfd6eccad 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 6 76 4.2E-31 T 11-11-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 S40542_RS16830 a992feb02df6cf4dda90884dfd6eccad 77 Pfam PF06667 Phage shock protein B 5 75 9.4E-32 T 11-11-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 S40542_RS20680 190210dac3f10e6d55117cc7fac83ced 183 Gene3D G3DSA:2.40.50.100 35 85 3.0E-4 T 11-11-2016 S40542_RS07015 dcb59082b103857ae4c10f317b9fb9d1 499 SMART SM00887 199 491 8.2E-22 T 11-11-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 S40542_RS07015 dcb59082b103857ae4c10f317b9fb9d1 499 Pfam PF09459 Ethylbenzene dehydrogenase 200 489 1.9E-35 T 11-11-2016 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain GO:0020037 S40542_RS16130 87aa7257dee0950acca9814d7f89e146 311 SUPERFAMILY SSF49899 35 267 1.95E-12 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain S40542_RS15925 17963c1a1f7c01e3f5cfb8f115f449fe 183 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 147 6.0E-20 T 11-11-2016 IPR013362 Pilus modification type IV, PilV S40542_RS08175 0ae8f5079eff9cc93e808850d70778c1 371 Pfam PF14240 YHYH protein 166 369 1.9E-68 T 11-11-2016 IPR025924 YHYH domain S40542_RS13800 073aea0d7bb353b609d420cb969eefa4 90 SUPERFAMILY SSF47336 14 89 5.04E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13800 073aea0d7bb353b609d420cb969eefa4 90 Pfam PF00550 Phosphopantetheine attachment site 15 84 2.2E-6 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS13800 073aea0d7bb353b609d420cb969eefa4 90 Gene3D G3DSA:1.10.1200.10 7 89 2.4E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain S40542_RS12960 e96e178e4121ad42dac70cafdcf4bee8 134 Gene3D G3DSA:3.80.10.10 25 131 4.5E-15 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like S40542_RS12960 e96e178e4121ad42dac70cafdcf4bee8 134 SUPERFAMILY SSF52047 25 130 3.53E-15 T 11-11-2016 S40542_RS11220 f0f563cb6c223a3c597e6885f4929910 340 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 2 252 8.2E-82 T 11-11-2016 IPR018712 Domain of unknown function DUF2235 S40542_RS07125 8542b230593b4914331915be86e484e4 403 Pfam PF12698 ABC-2 family transporter protein 27 388 5.0E-30 T 11-11-2016 S40542_RS15230 4e2d16cc5c8d19023e561f0520a92a1b 455 Pfam PF12704 MacB-like periplasmic core domain 19 218 9.3E-11 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS04960 30dc3d15bc69879cf2d7139a409039ad 184 Pfam PF03923 Uncharacterized lipoprotein 36 182 1.1E-29 T 11-11-2016 IPR005619 Uncharacterised protein family, YajG S40542_RS16390 77e9d8c28ac9d7ca9fea430cf912e531 70 Pfam PF05489 Phage Tail Protein X 8 59 7.4E-22 T 11-11-2016 IPR008861 Phage Tail Protein X-like S40542_RS10570 262601463bbc0adb06f96a56c75dd01c 146 Gene3D G3DSA:3.90.1720.10 17 99 9.6E-4 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain S40542_RS20250 f4f1cb9d8f2261843d00ccbcf21680de 155 Pfam PF11026 Protein of unknown function (DUF2721) 20 146 1.2E-30 T 11-11-2016 IPR021279 Protein of unknown function DUF2721 S40542_RS18705 d596622c1f12e891da887a4a5b88c22a 157 Pfam PF05258 Protein of unknown function (DUF721) 10 89 9.3E-14 T 11-11-2016 IPR007922 Protein of unknown function DUF721/UPF0232 S40542_RS16335 656ddec55cb237f1c0215e20d7c809be 444 Pfam PF12704 MacB-like periplasmic core domain 20 205 3.9E-18 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS16335 656ddec55cb237f1c0215e20d7c809be 444 Pfam PF02687 FtsX-like permease family 320 436 5.8E-15 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS04300 48cdf948031c5c35df74612d52a96753 124 Pfam PF04219 Protein of unknown function, DUF 18 103 8.5E-31 T 11-11-2016 IPR007335 Protein of unknown function DUF413 S40542_RS16930 e4433dbc2d4fe920fd867b70a36882bb 135 Gene3D G3DSA:1.10.150.240 65 111 3.5E-5 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 S40542_RS12995 7366763afb80eacb0eb65c354eba91e4 300 Pfam PF13737 Transposase DDE domain 16 127 2.2E-40 T 11-11-2016 IPR025668 Transposase DDE domain S40542_RS02405 fe716b49ba07d2bb53146e8696b4f54a 210 Pfam PF10144 Bacterial virulence factor haemolysin 21 155 2.4E-9 T 11-11-2016 IPR019305 Uncharacterised protein family Smp S40542_RS14875 03a4f515b0b31487cda910a1e50e4444 256 Pfam PF09836 Putative DNA-binding domain 5 91 2.6E-25 T 11-11-2016 IPR018640 Putative DNA-binding domain, bacteria S40542_RS09855 20f358dacf577d117bad427aebfca49e 116 SUPERFAMILY SSF101386 3 89 9.59E-6 T 11-11-2016 S40542_RS16330 d639b2c0ad926e8447671778f94cdb2a 402 Pfam PF12704 MacB-like periplasmic core domain 20 247 2.1E-12 T 11-11-2016 IPR025857 MacB-like periplasmic core domain S40542_RS16330 d639b2c0ad926e8447671778f94cdb2a 402 Pfam PF02687 FtsX-like permease family 285 389 4.7E-10 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 S40542_RS00600 82ce91036895c99084890e36dd6e5346 199 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 192 5.6E-29 T 11-11-2016 IPR018635 Uncharacterised protein family UPF0319 S40542_RS05950 cd7901553b6880e103700c93bb390541 130 Pfam PF11456 Protein of unknown function (DUF3019) 30 129 1.8E-22 T 11-11-2016 IPR021559 Protein of unknown function DUF3019 S40542_RS11550 978c457c4c57f20c3f5ad77f5fcdf1ab 575 Pfam PF11949 Protein of unknown function (DUF3466) 3 573 1.9E-97 T 11-11-2016 IPR022562 Protein of unknown function DUF3466 S40542_RS16615 540c1fc42e5e7142844d0b6fb21d9346 91 SUPERFAMILY SSF47413 21 75 1.42E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS16615 540c1fc42e5e7142844d0b6fb21d9346 91 Gene3D G3DSA:1.10.260.40 22 64 2.4E-7 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 S40542_RS16150 35c133aa36034bd8769550ae499a2043 233 Pfam PF06468 Spondin_N 36 154 2.2E-9 T 11-11-2016 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 S40542_RS17000 1044de10dfbcc41a9ff038554223c0af 413 Pfam PF13440 Polysaccharide biosynthesis protein 36 324 2.0E-16 T 11-11-2016 S40542_RS16325 9fa1f304e22c95b960e6618974db8ab4 297 SUPERFAMILY SSF53850 134 270 9.88E-7 T 11-11-2016 S40542_RS03560 d34e90491efeb27dc0b762ddd78425a7 574 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 565 1.3E-262 T 11-11-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily S40542_RS03560 d34e90491efeb27dc0b762ddd78425a7 574 Pfam PF00474 Sodium:solute symporter family 33 300 9.9E-35 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 S40542_RS03560 d34e90491efeb27dc0b762ddd78425a7 574 Pfam PF00474 Sodium:solute symporter family 381 496 2.3E-17 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 S40542_RS04415 b689f1cf7ecab65e1962084b059fe48d 487 Gene3D G3DSA:1.10.443.10 224 334 2.3E-22 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS04415 b689f1cf7ecab65e1962084b059fe48d 487 Gene3D G3DSA:1.10.443.10 373 463 2.3E-22 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS04415 b689f1cf7ecab65e1962084b059fe48d 487 SUPERFAMILY SSF56349 222 318 2.12E-17 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS04415 b689f1cf7ecab65e1962084b059fe48d 487 SUPERFAMILY SSF56349 365 464 2.12E-17 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 S40542_RS04415 b689f1cf7ecab65e1962084b059fe48d 487 Pfam PF00589 Phage integrase family 243 457 1.7E-9 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 S40542_RS18275 6345396db2f69a50f98e4491f44f7576 568 Pfam PF07603 Protein of unknown function (DUF1566) 389 562 3.0E-20 T 11-11-2016 IPR011460 Protein of unknown function DUF1566 S40542_RS08340 aae6b4994dd0acf6b82cc6bea41b07c8 581 SUPERFAMILY SSF55874 6 198 9.17E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS08340 aae6b4994dd0acf6b82cc6bea41b07c8 581 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 136 1.1E-24 T 11-11-2016 S40542_RS08340 aae6b4994dd0acf6b82cc6bea41b07c8 581 Gene3D G3DSA:3.30.565.10 16 168 1.6E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain S40542_RS14910 a46664509dcc5bedfde4b095d8f9020d 204 SUPERFAMILY SSF74653 114 193 3.53E-24 T 11-11-2016 S40542_RS14910 a46664509dcc5bedfde4b095d8f9020d 204 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 123 201 5.7E-19 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS14910 a46664509dcc5bedfde4b095d8f9020d 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 118 139 1.0E-15 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 S40542_RS14910 a46664509dcc5bedfde4b095d8f9020d 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 175 1.0E-15 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 S40542_RS14910 a46664509dcc5bedfde4b095d8f9020d 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 62 72 1.0E-15 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 S40542_RS14910 a46664509dcc5bedfde4b095d8f9020d 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 157 1.0E-15 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 S40542_RS14910 a46664509dcc5bedfde4b095d8f9020d 204 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 124 202 6.9E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 S40542_RS14910 a46664509dcc5bedfde4b095d8f9020d 204 Gene3D G3DSA:3.30.1150.10 123 202 4.3E-12 T 11-11-2016 S40542_RS09050 43f64927f2eb6f0e32b1ef1f52a67ba7 152 Pfam PF10973 Protein of unknown function (DUF2799) 34 117 7.0E-17 T 11-11-2016 IPR021242 Protein of unknown function DUF2799 S40542_RS08250 b62cd394146768658ddb42b0e7878f6d 126 Pfam PF06961 Protein of unknown function (DUF1294) 48 102 8.3E-14 T 11-11-2016 IPR010718 Protein of unknown function DUF1294 S40542_RS00200 b378c821ff19d8f97144b1bb31d9b936 509 Pfam PF03055 Retinal pigment epithelial membrane protein 69 507 1.9E-77 T 11-11-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 S40542_RS19680 541e6b38f187650b5a30490ee1136081 169 Pfam PF13511 Domain of unknown function (DUF4124) 73 105 4.4E-8 T 11-11-2016 IPR025392 Domain of unknown function DUF4124 S40542_RS19445 3b6f09950d3f72fda0cde8cff7f1fa0a 164 Pfam PF11454 Protein of unknown function (DUF3016) 20 152 4.3E-36 T 11-11-2016 IPR021557 Protein of unknown function DUF3016 S40542_RS13020 134600e496135f7a11d33da03b1ba07b 163 Gene3D G3DSA:3.40.630.30 7 117 2.6E-4 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase S40542_RS17065 9f3d956a694aae521e0a14d6dda87467 2233 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 2189 2232 1.8E-11 T 11-11-2016 IPR020011 Motility protein FimV, C-terminal S40542_RS17065 9f3d956a694aae521e0a14d6dda87467 2233 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 49 122 6.1E-27 T 11-11-2016 IPR020012 Motility protein FimV, N-terminal S40542_RS10420 b4d9cf8a5817be81af047acf270b44c9 125 Pfam PF06252 Protein of unknown function (DUF1018) 51 119 1.1E-7 T 11-11-2016 IPR009363 Bacteriophage Mu, Gp16 S40542_RS04430 a6c4660592b8319f2b40e1679a8da2c7 158 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.4E-58 T 11-11-2016 IPR021334 Protein of unknown function DUF2947 S40542_RS16425 52b09b79d842a85a8e1de38c19b564a8 100 Pfam PF05488 PAAR motif 19 89 5.6E-12 T 11-11-2016 IPR008727 PAAR motif S40542_RS10200 6c9e7102aec8d09d28d9efa73bb31512 245 Pfam PF06149 Protein of unknown function (DUF969) 7 222 1.2E-81 T 11-11-2016 IPR010374 Protein of unknown function DUF969 S40542_RS06210 7481c91069e0dee93794f206a87c6752 233 Pfam PF00483 Nucleotidyl transferase 2 231 8.7E-32 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 S40542_RS06210 7481c91069e0dee93794f206a87c6752 233 Gene3D G3DSA:3.90.550.10 1 231 5.4E-56 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS06210 7481c91069e0dee93794f206a87c6752 233 SUPERFAMILY SSF53448 1 231 2.29E-55 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS02965 7ff6006c5fedd3e7f9e9c4f7d8a3e891 158 Pfam PF10027 Predicted integral membrane protein (DUF2269) 7 154 1.6E-47 T 11-11-2016 IPR018729 Protein of unknown function DUF2269, transmembrane S40542_RS12615 17411754b8378733338b1aea4d6fac26 422 SUPERFAMILY SSF51126 64 231 2.02E-6 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor S40542_RS06295 c798e33e7bbfcbfd2c9b68a778269b2f 241 SUPERFAMILY SSF53448 4 208 1.87E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS06295 c798e33e7bbfcbfd2c9b68a778269b2f 241 Gene3D G3DSA:3.90.550.10 4 202 7.6E-27 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases S40542_RS06295 c798e33e7bbfcbfd2c9b68a778269b2f 241 Pfam PF02348 Cytidylyltransferase 6 204 8.8E-23 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 S40542_RS12305 9dbed33d4f2c125ec1d73b987bd6fc76 198 Pfam PF04336 Protein of unknown function, DUF479 81 184 1.3E-26 T 11-11-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 S40542_RS14995 f1fc0f6bd0e012134dddc2262474d1d0 173 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 169 4.5E-39 T 11-11-2016 IPR021879 Ribosomal S4P (gammaproteobacterial) S40542_RS13375 616b7c811148b0d26eb9df406fc46bda 239 Pfam PF01925 Sulfite exporter TauE/SafE 7 230 7.2E-17 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 S40542_RS09750 313cccd7581344b6725115256f234e47 106 Pfam PF11196 Protein of unknown function (DUF2834) 4 98 8.6E-30 T 11-11-2016 IPR021362 Protein of unknown function DUF2834 S40542_RS01885 d12660a6329e6c862f94122adfdc5a2d 278 SUPERFAMILY SSF53474 22 273 2.29E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS01885 d12660a6329e6c862f94122adfdc5a2d 278 Pfam PF00756 Putative esterase 42 257 1.5E-12 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 S40542_RS01885 d12660a6329e6c862f94122adfdc5a2d 278 Gene3D G3DSA:3.40.50.1820 32 274 3.5E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold S40542_RS19305 20db71b2dde9f0e79e479d443ed56d5c 253 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 3 253 5.5E-83 T 11-11-2016 IPR026387 Outer membrane protein S40542_RS11125 eecf6f12c45425e76b03f8e098000d27 265 SUPERFAMILY SSF101967 67 143 2.75E-5 T 11-11-2016 S40542_RS11125 eecf6f12c45425e76b03f8e098000d27 265 Gene3D G3DSA:2.150.10.10 61 154 1.0E-5 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal S40542_RS21690 7608d7342bc6f8c297955579fb891d69 269 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 268 1.6E-69 T 11-11-2016 IPR003846 Uncharacterised protein family UPF0061 S40542_RS04505 d1a76bd74960e7bdf85b3898d30bba90 165 Pfam PF06271 RDD family 7 145 3.3E-18 T 11-11-2016 IPR010432 RDD S40542_RS07010 07ef7860e0dfc76b6b261889601f2046 225 Pfam PF07603 Protein of unknown function (DUF1566) 53 201 1.6E-17 T 11-11-2016 IPR011460 Protein of unknown function DUF1566 S40542_RS18800 c30aa83e7bce78fa444eaa5b82b903f6 243 Pfam PF01925 Sulfite exporter TauE/SafE 12 233 4.3E-19 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 S40542_RS07625 b5fdc3293ebd02ebd7ca03142fd54441 154 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 41 133 2.6E-11 T 11-11-2016 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 S40542_RS03335 0aefc1d9091c21a00d8481199d81bd3e 88 Pfam PF13467 Ribbon-helix-helix domain 16 83 1.4E-21 T 11-11-2016 IPR027373 Ribbon-helix-helix domain S40542_RS06395 1ba7a12f41d43b9f95012088e5178616 747 Pfam PF02120 Flagellar hook-length control protein FliK 623 704 2.0E-22 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal S40542_RS08790 e8a019a903896c77220cb4ceec3e34f3 548 Pfam PF13584 Oxygen tolerance 16 448 3.3E-101 T 11-11-2016 IPR025738 Aerotolerance-related protein BatD S40542_RS20460 822496127e8c09550a41365c73691945 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 6.0E-30 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 S40542_RS12460 1176c4544c04ba2aa78dd3657ecbf42a 186 Pfam PF16219 Domain of unknown function (DUF4879) 68 185 9.1E-15 T 11-11-2016 IPR032624 Protein of unknown function DUF4879 S40542_RS04035 d977d263599ff2f2cafeec02326ca219 116 Pfam PF11042 Protein of unknown function (DUF2750) 12 114 1.4E-30 T 11-11-2016 IPR021284 Protein of unknown function DUF2750 S40542_RS06940 0c93d4bfea64ca0a3957ff8500eb3621 67 Pfam PF13683 Integrase core domain 3 37 2.2E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 S40542_RS07610 6d7cb0cc8bb61f381e6e597628cde1c0 847 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 426 495 2.2E-14 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 S40542_RS18835 afea9efb015d40aa5acfad44ddf5cb89 442 SUPERFAMILY SSF56801 45 335 7.72E-15 T 11-11-2016 S40542_RS16965 a71688a32d8e14a3e0f08bbb7dba4a12 379 Pfam PF04230 Polysaccharide pyruvyl transferase 17 305 1.5E-25 T 11-11-2016 IPR007345 Polysaccharide pyruvyl transferase S40542_RS16465 cdcf29f17aee0bf5158ab32633952ee2 434 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 125 246 2.4E-27 T 11-11-2016 IPR006521 Tail protein I S40542_RS16465 cdcf29f17aee0bf5158ab32633952ee2 434 Pfam PF09684 Phage tail protein (Tail_P2_I) 74 119 1.0E-5 T 11-11-2016 IPR006521 Tail protein I S40542_RS16465 cdcf29f17aee0bf5158ab32633952ee2 434 Pfam PF09684 Phage tail protein (Tail_P2_I) 124 246 1.4E-31 T 11-11-2016 IPR006521 Tail protein I S40542_RS07455 28834ca86e2d27d8bc4b0e4b2a266dcc 156 Pfam PF04657 Putative inner membrane exporter, YdcZ 11 148 9.3E-33 T 11-11-2016 IPR006750 Putative inner membrane exporter, YdcZ S40542_RS08775 cd7bb673611962cbd2f2b04d8df5a454 285 Pfam PF04280 Tim44-like domain 162 280 2.1E-14 T 11-11-2016 IPR007379 Tim44-like domain S40542_RS08775 cd7bb673611962cbd2f2b04d8df5a454 285 SMART SM00978 154 281 1.4E-30 T 11-11-2016 IPR007379 Tim44-like domain S40542_RS08775 cd7bb673611962cbd2f2b04d8df5a454 285 SUPERFAMILY SSF54427 163 279 5.55E-13 T 11-11-2016 IPR032710 NTF2-like domain S40542_RS13400 e2bd238f7bfb0d95ada785f6d86ea106 121 Pfam PF08888 HopJ type III effector protein 10 117 1.2E-47 T 11-11-2016 IPR014984 HopJ type III effector protein S40542_RS13400 e2bd238f7bfb0d95ada785f6d86ea106 121 Gene3D G3DSA:3.20.160.10 4 119 8.1E-51 T 11-11-2016 S40542_RS05235 7e822ea198b9bfebac61bac877331bb9 405 SUPERFAMILY SSF56935 16 405 1.1E-15 T 11-11-2016 S40542_RS06895 719e673429458061c57fa90f96d7b326 292 Pfam PF02517 CAAX protease self-immunity 188 281 7.9E-17 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 S40542_RS16695 b37dc904521b6357f1989a7795534db1 197 PIRSF PIRSF028688 1 197 2.1E-20 T 11-11-2016 IPR014549 Flagellar protein FlgO S40542_RS20310 64a4e204b4493d108a88d0655693baab 397 SUPERFAMILY SSF140959 5 387 1.79E-101 T 11-11-2016 S40542_RS20310 64a4e204b4493d108a88d0655693baab 397 Pfam PF08933 Domain of unknown function (DUF1864) 2 388 3.9E-186 T 11-11-2016 IPR015029 Protein of unknown function DUF1864 S40542_RS05420 09c49b92943a09c6492507033e89bf2c 561 Pfam PF03571 Peptidase family M49 183 393 9.2E-13 T 11-11-2016 S40542_RS13070 383c3dfc76ee0639da6758bd242ea6be 250 Pfam PF09948 Predicted metal-binding integral membrane protein (DUF2182) 70 245 5.0E-10 T 11-11-2016 IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding S40542_RS12870 7470af9001a078616e866e0881058229 142 Pfam PF11008 Protein of unknown function (DUF2846) 1 109 9.8E-15 T 11-11-2016 IPR022548 Domain of unknown function DUF2846 S40542_RS07095 54d8d578cf0ae46c763cd8949892d654 274 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 138 268 5.3E-15 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 S40542_RS13485 86dcefca3c1776293a130f66613ba877 478 Pfam PF01554 MatE 46 204 2.2E-10 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS13485 86dcefca3c1776293a130f66613ba877 478 Pfam PF01554 MatE 272 433 1.3E-14 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 S40542_RS20130 4555dedaf8226a8886842320ab8757ac 59 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 33 2.8E-9 T 11-11-2016 IPR032831 Prokaryotic lipoprotein-attachment site S40542_RS15680 88ac3ec86e40bf04450cf63dc4b4a171 96 Pfam PF03788 LrgA family 3 87 7.3E-17 T 11-11-2016 IPR005538 LrgA/CidA family GO:0016021 S40542_RS18895 a05f2cafc318b78c221a15b0f54793af 188 SMART SM00749 127 188 2.1E-4 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria S40542_RS18895 a05f2cafc318b78c221a15b0f54793af 188 SMART SM00749 49 112 7.0 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria S40542_RS18895 a05f2cafc318b78c221a15b0f54793af 188 Pfam PF04972 BON domain 122 187 5.2E-17 T 11-11-2016 IPR007055 BON domain S40542_RS18895 a05f2cafc318b78c221a15b0f54793af 188 Pfam PF04972 BON domain 45 111 4.6E-12 T 11-11-2016 IPR007055 BON domain S40542_RS18285 66c648ac4190e8535099b32efa4898f6 235 Pfam PF11201 Protein of unknown function (DUF2982) 69 217 5.8E-45 T 11-11-2016 IPR021367 Protein of unknown function DUF2982 S40542_RS17210 15b6af9d6dd6abb8e2b7bdfd85cc3376 101 Pfam PF11743 Protein of unknown function (DUF3301) 5 96 2.8E-24 T 11-11-2016 IPR021732 Protein of unknown function DUF3301 S40542_RS07985 a97796880393c40f8c952a3f60c1587e 187 Pfam PF04366 Las17-binding protein actin regulator 99 187 5.2E-10 T 11-11-2016 IPR007461 Ysc84 actin-binding domain S40542_RS14230 9b66ea57be3d18eac65aadcc8a936a27 214 Pfam PF02517 CAAX protease self-immunity 107 194 1.3E-13 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 S40542_RS00310 d2207461587384874b945139a9fea02d 151 Pfam PF08896 Domain of unknown function (DUF1842) 8 117 1.7E-12 T 11-11-2016 IPR014992 Domain of unknown function DUF1842 S40542_RS17220 d929176b44c21cf6216e2a53f6e45c8c 75 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 6.8E-30 T 11-11-2016 IPR021250 Protein of unknown function DUF2789 S40542_RS12420 1ab181c55cf71e27b649b49730acce4c 300 Pfam PF13737 Transposase DDE domain 16 127 5.9E-40 T 11-11-2016 IPR025668 Transposase DDE domain S40542_RS13445 6905a61500b52e26ccb0f5787365079a 269 Pfam PF12679 ABC-2 family transporter protein 13 238 4.3E-9 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 S40542_RS07730 752b586bad6ba90f1d47a54061701c27 265 Pfam PF14704 Dermatopontin 103 258 3.6E-29 T 11-11-2016 S40542_RS04390 6f701ee9af1396751e18fcae8f5dd45a 263 Pfam PF01863 Protein of unknown function DUF45 43 255 2.1E-55 T 11-11-2016 IPR002725 Protein of unknown function DUF45 S40542_RS20115 b01b808ea45f89423f44ec16e174498e 277 Pfam PF11141 Protein of unknown function (DUF2914) 212 272 6.1E-21 T 11-11-2016 IPR022606 Protein of unknown function DUF2914 S40542_RS14475 6bece2f0819fe750e0b4055e13f05d40 204 Pfam PF13036 Peptidoglycan-synthase activator LpoB 15 193 1.5E-49 T 11-11-2016 IPR014094 Penicillin-binding protein activator LpoB S40542_RS10505 6d095163d8bfd0ffc11afe0904277152 311 Gene3D G3DSA:3.90.1690.10 6 308 1.9E-61 T 11-11-2016 S40542_RS09435 87c96e4b8378fc46d36fffda1c71b0bd 355 Pfam PF14224 Domain of unknown function (DUF4331) 33 93 1.2E-7 T 11-11-2016 IPR025566 Protein of unknown function DUF4331 S40542_RS09435 87c96e4b8378fc46d36fffda1c71b0bd 355 Pfam PF14224 Domain of unknown function (DUF4331) 135 257 6.1E-10 T 11-11-2016 IPR025566 Protein of unknown function DUF4331 S40542_RS17040 b31ad7777f27328596d3a36103218e3a 164 Pfam PF02674 Colicin V production protein 4 140 2.6E-33 T 11-11-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 S40542_RS12825 ebfeb7e47ea24c75ceda5748eb754495 477 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 39 248 3.1E-22 T 11-11-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 S40542_RS00340 9ea2cf4df65db653103284fc2940f1be 412 Pfam PF11853 Protein of unknown function (DUF3373) 7 83 2.5E-7 T 11-11-2016 IPR021803 Protein of unknown function DUF3373 S40542_RS00255 a80ad85435f42ac50e6b550e06338061 289 Pfam PF04224 Protein of unknown function, DUF417 144 267 1.3E-16 T 11-11-2016 IPR007339 Protein of unknown function DUF417 S40542_RS16395 d6841e4a76d9213561a2742e32e836c2 150 Pfam PF06995 Phage P2 GpU 14 144 1.3E-28 T 11-11-2016 IPR009734 Myoviridae, GpU S40542_RS02970 56d6808ebc1e5234fe8ff8d2ffbf415e 125 Pfam PF13781 DoxX-like family 15 115 6.3E-27 T 11-11-2016 IPR025695 DoxX-like family S40542_RS08325 9f7a8c6f86f6676e23ed9b87416cacf9 85 Gene3D G3DSA:1.10.287.190 31 64 6.8E-4 T 11-11-2016 IPR015872 Transcription initiation factor IIA, gamma subunit, N-terminal GO:0005672|GO:0006367 Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-674695|Reactome: R-HSA-6807505|Reactome: R-HSA-73776|Reactome: R-HSA-73779|Reactome: R-HSA-75953|Reactome: R-HSA-76042 S40542_RS11310 81cad1c0b2d00e61c9862eb52b7b6985 120 SUPERFAMILY SSF143422 1 52 1.06E-5 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 S40542_RS11815 7c91d7e9c32c6c55213329f5f15b0182 286 SUPERFAMILY SSF101898 111 261 9.15E-7 T 11-11-2016 S40542_RS04375 f66595ad5e5559cf021c0a9d8e6b6726 290 Pfam PF14267 Domain of unknown function (DUF4357) 222 275 4.6E-19 T 11-11-2016 IPR025579 Domain of unknown function DUF4357 S40542_RS03020 3b5c969ec005cd0e8b2f8abc4af07b28 60 Pfam PF03889 Domain of unknown function 14 51 1.4E-22 T 11-11-2016 IPR005589 Protein of unknown function DUF331 S40542_RS03950 a27ab241b4e0a7caaf3c211ac9234951 510 Pfam PF07012 Curlin associated repeat 467 509 5.1E-5 T 11-11-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 S40542_RS03950 a27ab241b4e0a7caaf3c211ac9234951 510 Pfam PF07012 Curlin associated repeat 419 450 1.2E-4 T 11-11-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 S40542_RS03950 a27ab241b4e0a7caaf3c211ac9234951 510 Pfam PF07012 Curlin associated repeat 220 250 1.3E-6 T 11-11-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 S40542_RS20730 ec4398000ea805531af005d13a343bed 126 Pfam PF03899 ATP synthase I chain 17 110 5.1E-16 T 11-11-2016 IPR005598 ATP synthase protein I S40542_RS08515 ea755bead49476438cdb1091e4fc3a6c 299 Pfam PF01925 Sulfite exporter TauE/SafE 43 282 9.1E-27 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 S40542_RS09175 627785cac0460d30b19e7dce21655983 222 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 7 211 3.7E-50 T 11-11-2016 S40542_RS16105 25c94fc8318cd0045829f230fe772039 90 Pfam PF10719 Late competence development protein ComFB 8 85 3.5E-18 T 11-11-2016 IPR019657 Late competence development protein ComFB S40542_RS19165 ffe1908bd0b2b7126e9b5e55e2a37cb8 302 Pfam PF03547 Membrane transport protein 5 152 1.0E-9 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 S40542_RS19165 ffe1908bd0b2b7126e9b5e55e2a37cb8 302 Pfam PF03547 Membrane transport protein 155 297 9.2E-13 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 S40542_RS00900 6d94afd830f937c248e7061f5c5a155f 649 Pfam PF05170 AsmA family 298 557 2.7E-23 T 11-11-2016 IPR007844 AsmA S40542_RS00900 6d94afd830f937c248e7061f5c5a155f 649 Pfam PF05170 AsmA family 1 226 2.6E-27 T 11-11-2016 IPR007844 AsmA