locus-tag class description JG479_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JG479_RS00005 PF00308 Bacterial dnaA protein JG479_RS00005 PF11638 DnaA N-terminal domain JG479_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JG479_RS00010 PF02767 DNA polymerase III beta subunit, central domain JG479_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JG479_RS00015 PF02463 RecF/RecN/SMC N terminal domain JG479_RS00020 PF01751 Toprim domain JG479_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS00020 PF18053 DNA gyrase B subunit insert domain JG479_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus JG479_RS00020 PF00204 DNA gyrase B JG479_RS00025 PF02091 Glycyl-tRNA synthetase alpha subunit JG479_RS00030 PF05746 DALR anticodon binding domain JG479_RS00030 PF02092 Glycyl-tRNA synthetase beta subunit JG479_RS00040 PF01797 Transposase IS200 like JG479_RS00045 PF01206 Sulfurtransferase TusA JG479_RS00050 PF00108 Thiolase, N-terminal domain JG479_RS00050 PF02803 Thiolase, C-terminal domain JG479_RS00055 PF00378 Enoyl-CoA hydratase/isomerase JG479_RS00055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JG479_RS00055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JG479_RS00060 PF01464 Transglycosylase SLT domain JG479_RS00060 PF14718 Soluble lytic murein transglycosylase L domain JG479_RS00065 PF00557 Metallopeptidase family M24 JG479_RS00070 PF01205 Uncharacterized protein family UPF0029 JG479_RS00070 PF09186 Domain of unknown function (DUF1949) JG479_RS00075 PF02386 Cation transport protein JG479_RS00100 PF02254 TrkA-N domain JG479_RS00100 PF02080 TrkA-C domain JG479_RS00105 PF01189 16S rRNA methyltransferase RsmB/F JG479_RS00105 PF01029 NusB family JG479_RS00110 PF00551 Formyl transferase JG479_RS00110 PF02911 Formyl transferase, C-terminal domain JG479_RS00115 PF01327 Polypeptide deformylase JG479_RS00125 PF17782 DprA winged helix domain JG479_RS00125 PF02481 DNA recombination-mediator protein A JG479_RS00130 PF04361 Protein of unknown function (DUF494) JG479_RS00135 PF01396 Topoisomerase DNA binding C4 zinc finger JG479_RS00140 PF01300 Telomere recombination JG479_RS00145 PF01218 Coproporphyrinogen III oxidase JG479_RS00150 PF01152 Bacterial-like globin JG479_RS00155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JG479_RS00155 PF01488 Shikimate / quinate 5-dehydrogenase JG479_RS00155 PF08501 Shikimate dehydrogenase substrate binding domain JG479_RS00160 PF07369 Protein of unknown function (DUF1488) JG479_RS00165 PF00132 Bacterial transferase hexapeptide (six repeats) JG479_RS00205 PF08448 PAS fold JG479_RS00205 PF08447 PAS fold JG479_RS00205 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS00205 PF00563 EAL domain JG479_RS00260 PF00206 Lyase JG479_RS00260 PF10415 Fumarase C C-terminus JG479_RS00290 PF00072 Response regulator receiver domain JG479_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS00290 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS00290 PF09308 LuxQ, periplasmic JG479_RS00295 PF01037 Lrp/AsnC ligand binding domain JG479_RS00300 PF08933 Domain of unknown function (DUF1864) JG479_RS00305 PF00266 Aminotransferase class-V JG479_RS00330 PF00781 Diacylglycerol kinase catalytic domain JG479_RS00340 PF00392 Bacterial regulatory proteins, gntR family JG479_RS00340 PF00155 Aminotransferase class I and II JG479_RS00355 PF00255 Glutathione peroxidase JG479_RS00365 PF03591 AzlC protein JG479_RS00375 PF18416 N-acetylglucosamine binding protein domain 2 JG479_RS00375 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JG479_RS00380 PF00326 Prolyl oligopeptidase family JG479_RS00380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JG479_RS00395 PF00593 TonB dependent receptor JG479_RS00395 PF07715 TonB-dependent Receptor Plug Domain JG479_RS00400 PF00210 Ferritin-like domain JG479_RS00415 PF07152 YaeQ protein JG479_RS00420 PF01926 50S ribosome-binding GTPase JG479_RS00430 PF08279 HTH domain JG479_RS00430 PF12431 Transcriptional regulator JG479_RS00430 PF00072 Response regulator receiver domain JG479_RS00435 PF03764 Elongation factor G, domain IV JG479_RS00435 PF00009 Elongation factor Tu GTP binding domain JG479_RS00435 PF03144 Elongation factor Tu domain 2 JG479_RS00435 PF00679 Elongation factor G C-terminus JG479_RS00435 PF14492 Elongation Factor G, domain II JG479_RS00440 PF13632 Glycosyl transferase family group 2 JG479_RS00445 PF04349 Periplasmic glucan biosynthesis protein, MdoG JG479_RS00455 PF00490 Delta-aminolevulinic acid dehydratase JG479_RS00460 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS00460 PF01590 GAF domain JG479_RS00460 PF00563 EAL domain JG479_RS00460 PF00360 Phytochrome region JG479_RS00465 PF01026 TatD related DNase JG479_RS00475 PF00902 Sec-independent protein translocase protein (TatC) JG479_RS00480 PF02416 mttA/Hcf106 family JG479_RS00485 PF02416 mttA/Hcf106 family JG479_RS00490 PF03109 ABC1 family JG479_RS00500 PF01209 ubiE/COQ5 methyltransferase family JG479_RS00515 PF01645 Conserved region in glutamate synthase JG479_RS00520 PF01636 Phosphotransferase enzyme family JG479_RS00525 PF01008 Initiation factor 2 subunit family JG479_RS00535 PF03079 ARD/ARD' family JG479_RS00545 PF00596 Class II Aldolase and Adducin N-terminal domain JG479_RS00550 PF00155 Aminotransferase class I and II JG479_RS00555 PF00795 Carbon-nitrogen hydrolase JG479_RS00560 PF00483 Nucleotidyl transferase JG479_RS00560 PF01050 Mannose-6-phosphate isomerase JG479_RS00565 PF01627 Hpt domain JG479_RS00565 PF00072 Response regulator receiver domain JG479_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS00565 PF00672 HAMP domain JG479_RS00565 PF17149 Periplasmic sensor domain found in signal transduction proteins JG479_RS00565 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS00575 PF01230 HIT domain JG479_RS00585 PF01433 Peptidase family M1 domain JG479_RS00590 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JG479_RS00590 PF01565 FAD binding domain JG479_RS00595 PF03099 Biotin/lipoate A/B protein ligase family JG479_RS00595 PF02237 Biotin protein ligase C terminal domain JG479_RS00595 PF08279 HTH domain JG479_RS00600 PF03309 Type III pantothenate kinase JG479_RS00625 PF03144 Elongation factor Tu domain 2 JG479_RS00625 PF00009 Elongation factor Tu GTP binding domain JG479_RS00625 PF03143 Elongation factor Tu C-terminal domain JG479_RS00635 PF06794 Uncharacterised protein family (UPF0270) JG479_RS00640 PF00561 alpha/beta hydrolase fold JG479_RS00650 PF12848 ABC transporter JG479_RS00650 PF00005 ABC transporter JG479_RS00655 PF09526 Probable metal-binding protein (DUF2387) JG479_RS00660 PF04102 SlyX JG479_RS00670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JG479_RS00670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JG479_RS00675 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JG479_RS00680 PF01208 Uroporphyrinogen decarboxylase (URO-D) JG479_RS00685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS00685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JG479_RS00695 PF00440 Bacterial regulatory proteins, tetR family JG479_RS00700 PF08502 LeuA allosteric (dimerisation) domain JG479_RS00700 PF00682 HMGL-like JG479_RS00705 PF00180 Isocitrate/isopropylmalate dehydrogenase JG479_RS00710 PF00330 Aconitase family (aconitate hydratase) JG479_RS00715 PF00694 Aconitase C-terminal domain JG479_RS00725 PF04231 Endonuclease I JG479_RS00730 PF00667 FAD binding domain JG479_RS00730 PF00175 Oxidoreductase NAD-binding domain JG479_RS00730 PF00258 Flavodoxin JG479_RS00735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JG479_RS00735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JG479_RS00740 PF01507 Phosphoadenosine phosphosulfate reductase family JG479_RS00755 PF00694 Aconitase C-terminal domain JG479_RS00755 PF00330 Aconitase family (aconitate hydratase) JG479_RS00780 PF00072 Response regulator receiver domain JG479_RS00780 PF00158 Sigma-54 interaction domain JG479_RS00780 PF02954 Bacterial regulatory protein, Fis family JG479_RS00785 PF00989 PAS fold JG479_RS00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS00785 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS00795 PF00120 Glutamine synthetase, catalytic domain JG479_RS00795 PF03951 Glutamine synthetase, beta-Grasp domain JG479_RS00800 PF00679 Elongation factor G C-terminus JG479_RS00800 PF00009 Elongation factor Tu GTP binding domain JG479_RS00800 PF03144 Elongation factor Tu domain 2 JG479_RS00805 PF02018 Carbohydrate binding domain JG479_RS00805 PF00331 Glycosyl hydrolase family 10 JG479_RS00805 PF06452 Carbohydrate family 9 binding domain-like JG479_RS00820 PF03631 Virulence factor BrkB JG479_RS00825 PF02580 D-Tyr-tRNA(Tyr) deacylase JG479_RS00835 PF09500 Putative thioesterase (yiiD_Cterm) JG479_RS00835 PF00583 Acetyltransferase (GNAT) family JG479_RS00840 PF02253 Phospholipase A1 JG479_RS00850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JG479_RS00850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JG479_RS00860 PF00701 Dihydrodipicolinate synthetase family JG479_RS00870 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JG479_RS00875 PF00691 OmpA family JG479_RS00880 PF00330 Aconitase family (aconitate hydratase) JG479_RS00880 PF11791 Aconitate B N-terminal domain JG479_RS00880 PF06434 Aconitate hydratase 2 N-terminus JG479_RS00890 PF00266 Aminotransferase class-V JG479_RS00905 PF01263 Aldose 1-epimerase JG479_RS00915 PF04820 Tryptophan halogenase JG479_RS00925 PF00474 Sodium:solute symporter family JG479_RS00930 PF16875 Glycosyl hydrolase family 36 N-terminal domain JG479_RS00930 PF16874 Glycosyl hydrolase family 36 C-terminal domain JG479_RS00935 PF00271 Helicase conserved C-terminal domain JG479_RS00935 PF17191 RecG wedge domain JG479_RS00935 PF00270 DEAD/DEAH box helicase JG479_RS00940 PF00588 SpoU rRNA Methylase family JG479_RS00940 PF12105 SpoU, rRNA methylase, C-terminal JG479_RS00945 PF01037 Lrp/AsnC ligand binding domain JG479_RS00950 PF03590 Aspartate-ammonia ligase JG479_RS00960 PF01042 Endoribonuclease L-PSP JG479_RS00965 PF02824 TGS domain JG479_RS00965 PF04607 Region found in RelA / SpoT proteins JG479_RS00965 PF13291 ACT domain JG479_RS00970 PF01192 RNA polymerase Rpb6 JG479_RS00975 PF00625 Guanylate kinase JG479_RS00980 PF01256 Carbohydrate kinase JG479_RS00980 PF03853 YjeF-related protein N-terminus JG479_RS00985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JG479_RS00995 PF00118 TCP-1/cpn60 chaperonin family JG479_RS01000 PF00166 Chaperonin 10 Kd subunit JG479_RS01005 PF04186 FxsA cytoplasmic membrane protein JG479_RS01010 PF03091 CutA1 divalent ion tolerance protein JG479_RS01015 PF02683 Cytochrome C biogenesis protein transmembrane region JG479_RS01015 PF11412 Disulphide bond corrector protein DsbC JG479_RS01020 PF01220 Dehydroquinase class II JG479_RS01025 PF00364 Biotin-requiring enzyme JG479_RS01030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JG479_RS01030 PF00289 Biotin carboxylase, N-terminal domain JG479_RS01030 PF02785 Biotin carboxylase C-terminal domain JG479_RS01035 PF07729 FCD domain JG479_RS01035 PF00392 Bacterial regulatory proteins, gntR family JG479_RS01045 PF05035 2-keto-3-deoxy-galactonokinase JG479_RS01050 PF01266 FAD dependent oxidoreductase JG479_RS01050 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JG479_RS01055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JG479_RS01055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JG479_RS01065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JG479_RS01070 PF00288 GHMP kinases N terminal domain JG479_RS01070 PF08544 GHMP kinases C terminal JG479_RS01070 PF10509 Galactokinase galactose-binding signature JG479_RS01075 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JG479_RS01075 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JG479_RS01080 PF16363 GDP-mannose 4,6 dehydratase JG479_RS01085 PF00106 short chain dehydrogenase JG479_RS01100 PF03466 LysR substrate binding domain JG479_RS01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS01105 PF08659 KR domain JG479_RS01105 PF00698 Acyl transferase domain JG479_RS01105 PF14765 Polyketide synthase dehydratase JG479_RS01105 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS01105 PF16197 Ketoacyl-synthetase C-terminal extension JG479_RS01105 PF00107 Zinc-binding dehydrogenase JG479_RS01105 PF02801 Beta-ketoacyl synthase, C-terminal domain JG479_RS01105 PF00550 Phosphopantetheine attachment site JG479_RS01105 PF00109 Beta-ketoacyl synthase, N-terminal domain JG479_RS01110 PF00117 Glutamine amidotransferase class-I JG479_RS01120 PF00202 Aminotransferase class-III JG479_RS01125 PF04958 Arginine N-succinyltransferase beta subunit JG479_RS01130 PF00171 Aldehyde dehydrogenase family JG479_RS01140 PF02566 OsmC-like protein JG479_RS01145 PF02675 S-adenosylmethionine decarboxylase JG479_RS01155 PF03222 Tryptophan/tyrosine permease family JG479_RS01170 PF00459 Inositol monophosphatase family JG479_RS01180 PF02080 TrkA-C domain JG479_RS01180 PF03600 Citrate transporter JG479_RS01185 PF00009 Elongation factor Tu GTP binding domain JG479_RS01190 PF01507 Phosphoadenosine phosphosulfate reductase family JG479_RS01195 PF14824 Sirohaem biosynthesis protein central JG479_RS01195 PF10414 Sirohaem synthase dimerisation region JG479_RS01195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JG479_RS01200 PF01791 DeoC/LacD family aldolase JG479_RS01215 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JG479_RS01220 PF02357 Transcription termination factor nusG JG479_RS01220 PF00467 KOW motif JG479_RS01225 PF00298 Ribosomal protein L11, RNA binding domain JG479_RS01225 PF03946 Ribosomal protein L11, N-terminal domain JG479_RS01230 PF00687 Ribosomal protein L1p/L10e family JG479_RS01235 PF00466 Ribosomal protein L10 JG479_RS01240 PF00542 Ribosomal protein L7/L12 C-terminal domain JG479_RS01240 PF16320 Ribosomal protein L7/L12 dimerisation domain JG479_RS01245 PF04560 RNA polymerase Rpb2, domain 7 JG479_RS01245 PF10385 RNA polymerase beta subunit external 1 domain JG479_RS01245 PF04565 RNA polymerase Rpb2, domain 3 JG479_RS01245 PF04561 RNA polymerase Rpb2, domain 2 JG479_RS01245 PF04563 RNA polymerase beta subunit JG479_RS01245 PF00562 RNA polymerase Rpb2, domain 6 JG479_RS01250 PF04983 RNA polymerase Rpb1, domain 3 JG479_RS01250 PF00623 RNA polymerase Rpb1, domain 2 JG479_RS01250 PF04997 RNA polymerase Rpb1, domain 1 JG479_RS01250 PF05000 RNA polymerase Rpb1, domain 4 JG479_RS01250 PF04998 RNA polymerase Rpb1, domain 5 JG479_RS01255 PF00164 Ribosomal protein S12/S23 JG479_RS01260 PF00177 Ribosomal protein S7p/S5e JG479_RS01265 PF03764 Elongation factor G, domain IV JG479_RS01265 PF00009 Elongation factor Tu GTP binding domain JG479_RS01265 PF03144 Elongation factor Tu domain 2 JG479_RS01265 PF00679 Elongation factor G C-terminus JG479_RS01265 PF14492 Elongation Factor G, domain II JG479_RS01270 PF00009 Elongation factor Tu GTP binding domain JG479_RS01270 PF03144 Elongation factor Tu domain 2 JG479_RS01270 PF03143 Elongation factor Tu C-terminal domain JG479_RS01275 PF08340 Domain of unknown function (DUF1732) JG479_RS01275 PF03755 YicC-like family, N-terminal region JG479_RS01280 PF03725 3' exoribonuclease family, domain 2 JG479_RS01280 PF01138 3' exoribonuclease family, domain 1 JG479_RS01285 PF00156 Phosphoribosyl transferase domain JG479_RS01290 PF01219 Prokaryotic diacylglycerol kinase JG479_RS01315 PF01293 Phosphoenolpyruvate carboxykinase JG479_RS01320 PF01430 Hsp33 protein JG479_RS01325 PF01479 S4 domain JG479_RS01330 PF11356 Type II secretion system protein C JG479_RS01335 PF00263 Bacterial type II and III secretion system protein JG479_RS01335 PF03958 Bacterial type II/III secretion system short domain JG479_RS01340 PF00437 Type II/IV secretion system protein JG479_RS01345 PF00482 Type II secretion system (T2SS), protein F JG479_RS01350 PF08334 Type II secretion system (T2SS), protein G JG479_RS01350 PF07963 Prokaryotic N-terminal methylation motif JG479_RS01355 PF12019 Type II transport protein GspH JG479_RS01355 PF07963 Prokaryotic N-terminal methylation motif JG479_RS01360 PF02501 Type II secretion system (T2SS), protein I JG479_RS01360 PF07963 Prokaryotic N-terminal methylation motif JG479_RS01365 PF11612 Type II secretion system (T2SS), protein J JG479_RS01365 PF07963 Prokaryotic N-terminal methylation motif JG479_RS01370 PF03934 Type II secretion system (T2SS), protein K JG479_RS01375 PF05134 Type II secretion system (T2SS), protein L JG479_RS01375 PF12693 GspL periplasmic domain JG479_RS01385 PF01203 Type II secretion system (T2SS), protein N JG479_RS01405 PF13746 4Fe-4S dicluster domain JG479_RS01405 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JG479_RS01405 PF12801 4Fe-4S binding domain JG479_RS01410 PF01636 Phosphotransferase enzyme family JG479_RS01415 PF01323 DSBA-like thioredoxin domain JG479_RS01420 PF01323 DSBA-like thioredoxin domain JG479_RS01425 PF05958 tRNA (Uracil-5-)-methyltransferase JG479_RS01435 PF01177 Asp/Glu/Hydantoin racemase JG479_RS01440 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JG479_RS01470 PF18029 Glyoxalase-like domain JG479_RS01470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JG479_RS01485 PF00072 Response regulator receiver domain JG479_RS01485 PF01627 Hpt domain JG479_RS01485 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS01485 PF00672 HAMP domain JG479_RS01485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS01490 PF00005 ABC transporter JG479_RS01500 PF00672 HAMP domain JG479_RS01500 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS01505 PF00486 Transcriptional regulatory protein, C terminal JG479_RS01505 PF00072 Response regulator receiver domain JG479_RS01510 PF00884 Sulfatase JG479_RS01515 PF01219 Prokaryotic diacylglycerol kinase JG479_RS01520 PF08019 Phosphoethanolamine transferase EptA/EptB JG479_RS01520 PF00884 Sulfatase JG479_RS01525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JG479_RS01525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JG479_RS01525 PF00205 Thiamine pyrophosphate enzyme, central domain JG479_RS01535 PF00920 Dehydratase family JG479_RS01540 PF00585 C-terminal regulatory domain of Threonine dehydratase JG479_RS01540 PF00291 Pyridoxal-phosphate dependent enzyme JG479_RS01555 PF00484 Carbonic anhydrase JG479_RS01560 PF13460 NAD(P)H-binding JG479_RS01565 PF04380 Membrane fusogenic activity JG479_RS01570 PF00580 UvrD/REP helicase N-terminal domain JG479_RS01570 PF13361 UvrD-like helicase C-terminal domain JG479_RS01575 PF00563 EAL domain JG479_RS01575 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS01575 PF03707 Bacterial signalling protein N terminal repeat JG479_RS01580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JG479_RS01590 PF01612 3'-5' exonuclease JG479_RS01590 PF01367 5'-3' exonuclease, C-terminal SAM fold JG479_RS01590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JG479_RS01590 PF00476 DNA polymerase family A JG479_RS01605 PF01926 50S ribosome-binding GTPase JG479_RS01610 PF00034 Cytochrome c JG479_RS01620 PF10675 Protein of unknown function (DUF2489) JG479_RS01625 PF06969 HemN C-terminal domain JG479_RS01625 PF04055 Radical SAM superfamily JG479_RS01630 PF04751 Protein of unknown function (DUF615) JG479_RS01635 PF01523 Putative modulator of DNA gyrase JG479_RS01645 PF05649 Peptidase family M13 JG479_RS01645 PF01431 Peptidase family M13 JG479_RS01650 PF01636 Phosphotransferase enzyme family JG479_RS01655 PF00293 NUDIX domain JG479_RS01660 PF07516 SecA Wing and Scaffold domain JG479_RS01660 PF07517 SecA DEAD-like domain JG479_RS01660 PF01043 SecA preprotein cross-linking domain JG479_RS01660 PF02810 SEC-C motif JG479_RS01665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS01665 PF02743 Cache domain JG479_RS01665 PF00672 HAMP domain JG479_RS01670 PF01370 NAD dependent epimerase/dehydratase family JG479_RS01675 PF00221 Aromatic amino acid lyase JG479_RS01680 PF17392 Urocanase C-terminal domain JG479_RS01680 PF17391 Urocanase N-terminal domain JG479_RS01680 PF01175 Urocanase Rossmann-like domain JG479_RS01685 PF07702 UTRA domain JG479_RS01685 PF00392 Bacterial regulatory proteins, gntR family JG479_RS01690 PF01979 Amidohydrolase family JG479_RS01695 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS01695 PF00563 EAL domain JG479_RS01695 PF03707 Bacterial signalling protein N terminal repeat JG479_RS01705 PF03737 Aldolase/RraA JG479_RS01710 PF01569 PAP2 superfamily JG479_RS01720 PF00672 HAMP domain JG479_RS01720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS01720 PF12729 Four helix bundle sensory module for signal transduction JG479_RS01730 PF00004 ATPase family associated with various cellular activities (AAA) JG479_RS01730 PF07724 AAA domain (Cdc48 subfamily) JG479_RS01730 PF10431 C-terminal, D2-small domain, of ClpB protein JG479_RS01735 PF00227 Proteasome subunit JG479_RS01745 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JG479_RS01745 PF18074 Primosomal protein N C-terminal domain JG479_RS01745 PF17764 3′ DNA-binding domain (3′BD) JG479_RS01745 PF00270 DEAD/DEAH box helicase JG479_RS01745 PF00271 Helicase conserved C-terminal domain JG479_RS01750 PF01197 Ribosomal protein L31 JG479_RS01755 PF00390 Malic enzyme, N-terminal domain JG479_RS01755 PF03949 Malic enzyme, NAD binding domain JG479_RS01760 PF01340 Met Apo-repressor, MetJ JG479_RS01765 PF01053 Cys/Met metabolism PLP-dependent enzyme JG479_RS01770 PF00696 Amino acid kinase family JG479_RS01770 PF00742 Homoserine dehydrogenase JG479_RS01770 PF03447 Homoserine dehydrogenase, NAD binding domain JG479_RS01775 PF00905 Penicillin binding protein transpeptidase domain JG479_RS01775 PF17092 Penicillin-binding protein OB-like domain JG479_RS01775 PF00912 Transglycosylase JG479_RS01780 PF11104 Type IV pilus assembly protein PilM; JG479_RS01790 PF04350 Pilus assembly protein, PilO JG479_RS01800 PF00263 Bacterial type II and III secretion system protein JG479_RS01800 PF03958 Bacterial type II/III secretion system short domain JG479_RS01800 PF07660 Secretin and TonB N terminus short domain JG479_RS01800 PF11741 AMIN domain JG479_RS01805 PF01202 Shikimate kinase JG479_RS01810 PF01761 3-dehydroquinate synthase JG479_RS01820 PF02086 D12 class N6 adenine-specific DNA methyltransferase JG479_RS01835 PF00834 Ribulose-phosphate 3 epimerase family JG479_RS01840 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS01845 PF00579 tRNA synthetases class I (W and Y) JG479_RS01865 PF17760 UvrA interaction domain JG479_RS01865 PF17755 UvrA DNA-binding domain JG479_RS01865 PF00005 ABC transporter JG479_RS01870 PF07690 Major Facilitator Superfamily JG479_RS01880 PF13411 MerR HTH family regulatory protein JG479_RS01885 PF01545 Cation efflux family JG479_RS01895 PF01545 Cation efflux family JG479_RS01895 PF16916 Dimerisation domain of Zinc Transporter JG479_RS01915 PF00873 AcrB/AcrD/AcrF family JG479_RS01935 PF18766 SWI2/SNF2 ATPase JG479_RS01935 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JG479_RS01935 PF11867 Domain of unknown function (DUF3387) JG479_RS01960 PF01370 NAD dependent epimerase/dehydratase family JG479_RS01975 PF02384 N-6 DNA Methylase JG479_RS01975 PF12161 HsdM N-terminal domain JG479_RS02005 PF00436 Single-strand binding protein family JG479_RS02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS02010 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS02010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS02010 PF00672 HAMP domain JG479_RS02010 PF00072 Response regulator receiver domain JG479_RS02010 PF01627 Hpt domain JG479_RS02015 PF03358 NADPH-dependent FMN reductase JG479_RS02020 PF01758 Sodium Bile acid symporter family JG479_RS02030 PF00291 Pyridoxal-phosphate dependent enzyme JG479_RS02055 PF03958 Bacterial type II/III secretion system short domain JG479_RS02055 PF00263 Bacterial type II and III secretion system protein JG479_RS02060 PF01471 Putative peptidoglycan binding domain JG479_RS02060 PF13401 AAA domain JG479_RS02070 PF00437 Type II/IV secretion system protein JG479_RS02070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JG479_RS02075 PF00482 Type II secretion system (T2SS), protein F JG479_RS02085 PF07963 Prokaryotic N-terminal methylation motif JG479_RS02090 PF14245 Type IV pilin PilA JG479_RS02090 PF07963 Prokaryotic N-terminal methylation motif JG479_RS02125 PF04085 rod shape-determining protein MreC JG479_RS02130 PF04093 rod shape-determining protein MreD JG479_RS02135 PF02545 Maf-like protein JG479_RS02140 PF00575 S1 RNA binding domain JG479_RS02140 PF10150 Ribonuclease E/G family JG479_RS02145 PF13502 AsmA-like C-terminal region JG479_RS02145 PF13116 Protein of unknown function JG479_RS02150 PF00795 Carbon-nitrogen hydrolase JG479_RS02155 PF01523 Putative modulator of DNA gyrase JG479_RS02160 PF05552 Conserved TM helix JG479_RS02160 PF00924 Mechanosensitive ion channel JG479_RS02170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JG479_RS02170 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS02180 PF01432 Peptidase family M3 JG479_RS02185 PF00072 Response regulator receiver domain JG479_RS02185 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS02190 PF04445 Putative SAM-dependent methyltransferase JG479_RS02195 PF00588 SpoU rRNA Methylase family JG479_RS02200 PF02082 Transcriptional regulator JG479_RS02205 PF00266 Aminotransferase class-V JG479_RS02210 PF01592 NifU-like N terminal domain JG479_RS02215 PF01521 Iron-sulphur cluster biosynthesis JG479_RS02220 PF07743 HSCB C-terminal oligomerisation domain JG479_RS02225 PF00012 Hsp70 protein JG479_RS02230 PF00111 2Fe-2S iron-sulfur cluster binding domain JG479_RS02235 PF00171 Aldehyde dehydrogenase family JG479_RS02240 PF01966 HD domain JG479_RS02245 PF00211 Adenylate and Guanylate cyclase catalytic domain JG479_RS02250 PF12706 Beta-lactamase superfamily domain JG479_RS02275 PF05552 Conserved TM helix JG479_RS02275 PF00924 Mechanosensitive ion channel JG479_RS02280 PF04338 Protein of unknown function, DUF481 JG479_RS02285 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JG479_RS02285 PF02563 Polysaccharide biosynthesis/export protein JG479_RS02285 PF10531 SLBB domain JG479_RS02295 PF02397 Bacterial sugar transferase JG479_RS02300 PF00535 Glycosyl transferase family 2 JG479_RS02310 PF00881 Nitroreductase family JG479_RS02320 PF00535 Glycosyl transferase family 2 JG479_RS02330 PF00534 Glycosyl transferases group 1 JG479_RS02330 PF13439 Glycosyltransferase Family 4 JG479_RS02340 PF00753 Metallo-beta-lactamase superfamily JG479_RS02340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JG479_RS02340 PF10996 Beta-Casp domain JG479_RS02345 PF00953 Glycosyl transferase family 4 JG479_RS02355 PF10531 SLBB domain JG479_RS02355 PF02563 Polysaccharide biosynthesis/export protein JG479_RS02360 PF01061 ABC-2 type transporter JG479_RS02365 PF00005 ABC transporter JG479_RS02375 PF00483 Nucleotidyl transferase JG479_RS02380 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JG479_RS02385 PF04321 RmlD substrate binding domain JG479_RS02390 PF16363 GDP-mannose 4,6 dehydratase JG479_RS02395 PF00535 Glycosyl transferase family 2 JG479_RS02410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JG479_RS02410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JG479_RS02410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JG479_RS02470 PF00535 Glycosyl transferase family 2 JG479_RS02470 PF00534 Glycosyl transferases group 1 JG479_RS02475 PF00534 Glycosyl transferases group 1 JG479_RS02475 PF13439 Glycosyltransferase Family 4 JG479_RS02520 PF00535 Glycosyl transferase family 2 JG479_RS02525 PF00535 Glycosyl transferase family 2 JG479_RS02535 PF01507 Phosphoadenosine phosphosulfate reductase family JG479_RS02540 PF00009 Elongation factor Tu GTP binding domain JG479_RS02545 PF02080 TrkA-C domain JG479_RS02545 PF03600 Citrate transporter JG479_RS02560 PF00483 Nucleotidyl transferase JG479_RS02565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JG479_RS02565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JG479_RS02565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JG479_RS02580 PF00672 HAMP domain JG479_RS02580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS02585 PF00149 Calcineurin-like phosphoesterase JG479_RS02590 PF04379 ApaG domain JG479_RS02595 PF00398 Ribosomal RNA adenine dimethylase JG479_RS02600 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JG479_RS02605 PF09312 SurA N-terminal domain JG479_RS02610 PF03968 OstA-like protein JG479_RS02610 PF04453 LPS transport system D JG479_RS02615 PF01636 Phosphotransferase enzyme family JG479_RS02620 PF00483 Nucleotidyl transferase JG479_RS02625 PF05099 Tellurite resistance protein TerB JG479_RS02625 PF00226 DnaJ domain JG479_RS02635 PF00849 RNA pseudouridylate synthase JG479_RS02640 PF00849 RNA pseudouridylate synthase JG479_RS02640 PF01479 S4 domain JG479_RS02645 PF03969 AFG1-like ATPase JG479_RS02660 PF02472 Biopolymer transport protein ExbD/TolR JG479_RS02665 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS02670 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS02680 PF07715 TonB-dependent Receptor Plug Domain JG479_RS02680 PF00593 TonB dependent receptor JG479_RS02685 PF18331 PKHD-type hydroxylase C-terminal domain JG479_RS02685 PF13640 2OG-Fe(II) oxygenase superfamily JG479_RS02690 PF01370 NAD dependent epimerase/dehydratase family JG479_RS02710 PF04055 Radical SAM superfamily JG479_RS02715 PF09285 Elongation factor P, C-terminal JG479_RS02715 PF01132 Elongation factor P (EF-P) OB domain JG479_RS02715 PF08207 Elongation factor P (EF-P) KOW-like domain JG479_RS02720 PF00152 tRNA synthetases class II (D, K and N) JG479_RS02725 PF07715 TonB-dependent Receptor Plug Domain JG479_RS02740 PF13667 ThiC-associated domain JG479_RS02740 PF01964 Radical SAM ThiC family JG479_RS02745 PF01266 FAD dependent oxidoreductase JG479_RS02755 PF05690 Thiazole biosynthesis protein ThiG JG479_RS02760 PF02581 Thiamine monophosphate synthase JG479_RS02765 PF00899 ThiF family JG479_RS02770 PF02666 Phosphatidylserine decarboxylase JG479_RS02775 PF03193 RsgA GTPase JG479_RS02780 PF00929 Exonuclease JG479_RS02800 PF01894 Uncharacterised protein family UPF0047 JG479_RS02810 PF01475 Ferric uptake regulator family JG479_RS02815 PF01914 MarC family integral membrane protein JG479_RS02820 PF01207 Dihydrouridine synthase (Dus) JG479_RS02825 PF04012 PspA/IM30 family JG479_RS02865 PF00563 EAL domain JG479_RS02865 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS02865 PF03707 Bacterial signalling protein N terminal repeat JG479_RS02870 PF08497 Radical SAM N-terminal JG479_RS02870 PF04055 Radical SAM superfamily JG479_RS02870 PF11842 Domain of unknown function (DUF3362) JG479_RS02875 PF00578 AhpC/TSA family JG479_RS02880 PF00571 CBS domain JG479_RS02880 PF03448 MgtE intracellular N domain JG479_RS02880 PF01769 Divalent cation transporter JG479_RS02885 PF00381 PTS HPr component phosphorylation site JG479_RS02890 PF03668 P-loop ATPase protein family JG479_RS02895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JG479_RS02900 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JG479_RS02905 PF04552 Sigma-54, DNA binding domain JG479_RS02905 PF04963 Sigma-54 factor, core binding domain JG479_RS02905 PF00309 Sigma-54 factor, Activator interacting domain (AID) JG479_RS02910 PF12399 Branched-chain amino acid ATP-binding cassette transporter JG479_RS02910 PF00005 ABC transporter JG479_RS02930 PF00571 CBS domain JG479_RS02930 PF01380 SIS domain JG479_RS02935 PF01699 Sodium/calcium exchanger protein JG479_RS02940 PF00005 ABC transporter JG479_RS02945 PF02405 Permease MlaE JG479_RS02950 PF02470 MlaD protein JG479_RS02955 PF05494 MlaC protein JG479_RS02960 PF13466 STAS domain JG479_RS02965 PF01722 BolA-like protein JG479_RS02970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JG479_RS02975 PF13180 PDZ domain JG479_RS02980 PF13180 PDZ domain JG479_RS02980 PF00595 PDZ domain JG479_RS02990 PF03969 AFG1-like ATPase JG479_RS02995 PF00572 Ribosomal protein L13 JG479_RS03000 PF00380 Ribosomal protein S9/S16 JG479_RS03005 PF00355 Rieske [2Fe-2S] domain JG479_RS03005 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JG479_RS03010 PF00033 Cytochrome b/b6/petB JG479_RS03010 PF00032 Cytochrome b(C-terminal)/b6/petD JG479_RS03015 PF02167 Cytochrome C1 family JG479_RS03020 PF02798 Glutathione S-transferase, N-terminal domain JG479_RS03020 PF00043 Glutathione S-transferase, C-terminal domain JG479_RS03025 PF04386 Stringent starvation protein B JG479_RS03030 PF04972 BON domain JG479_RS03035 PF13580 SIS domain JG479_RS03040 PF02021 Uncharacterised protein family UPF0102 JG479_RS03045 PF04348 LppC putative lipoprotein JG479_RS03050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JG479_RS03065 PF03631 Virulence factor BrkB JG479_RS03075 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS03075 PF00563 EAL domain JG479_RS03075 PF03707 Bacterial signalling protein N terminal repeat JG479_RS03080 PF05726 Pirin C-terminal cupin domain JG479_RS03080 PF02678 Pirin JG479_RS03085 PF13409 Glutathione S-transferase, N-terminal domain JG479_RS03105 PF02381 MraZ protein, putative antitoxin-like JG479_RS03110 PF01795 MraW methylase family JG479_RS03115 PF04999 Cell division protein FtsL JG479_RS03120 PF03717 Penicillin-binding Protein dimerisation domain JG479_RS03120 PF00905 Penicillin binding protein transpeptidase domain JG479_RS03125 PF01225 Mur ligase family, catalytic domain JG479_RS03125 PF02875 Mur ligase family, glutamate ligase domain JG479_RS03125 PF08245 Mur ligase middle domain JG479_RS03130 PF01225 Mur ligase family, catalytic domain JG479_RS03130 PF02875 Mur ligase family, glutamate ligase domain JG479_RS03130 PF08245 Mur ligase middle domain JG479_RS03135 PF00953 Glycosyl transferase family 4 JG479_RS03135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JG479_RS03140 PF08245 Mur ligase middle domain JG479_RS03140 PF02875 Mur ligase family, glutamate ligase domain JG479_RS03145 PF01098 Cell cycle protein JG479_RS03150 PF04101 Glycosyltransferase family 28 C-terminal domain JG479_RS03150 PF03033 Glycosyltransferase family 28 N-terminal domain JG479_RS03155 PF02875 Mur ligase family, glutamate ligase domain JG479_RS03155 PF01225 Mur ligase family, catalytic domain JG479_RS03155 PF08245 Mur ligase middle domain JG479_RS03160 PF01820 D-ala D-ala ligase N-terminus JG479_RS03160 PF07478 D-ala D-ala ligase C-terminus JG479_RS03165 PF03799 Cell division protein FtsQ JG479_RS03165 PF08478 POTRA domain, FtsQ-type JG479_RS03170 PF02491 SHS2 domain inserted in FTSA JG479_RS03175 PF12327 FtsZ family, C-terminal domain JG479_RS03175 PF00091 Tubulin/FtsZ family, GTPase domain JG479_RS03180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JG479_RS03185 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS03190 PF01931 Protein of unknown function DUF84 JG479_RS03195 PF00485 Phosphoribulokinase / Uridine kinase family JG479_RS03210 PF01433 Peptidase family M1 domain JG479_RS03210 PF11838 ERAP1-like C-terminal domain JG479_RS03225 PF02798 Glutathione S-transferase, N-terminal domain JG479_RS03225 PF00043 Glutathione S-transferase, C-terminal domain JG479_RS03235 PF00255 Glutathione peroxidase JG479_RS03240 PF00583 Acetyltransferase (GNAT) family JG479_RS03245 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS03245 PF00989 PAS fold JG479_RS03250 PF00072 Response regulator receiver domain JG479_RS03255 PF08331 Domain of unknown function (DUF1730) JG479_RS03260 PF02743 Cache domain JG479_RS03260 PF00672 HAMP domain JG479_RS03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS03265 PF03009 Glycerophosphoryl diester phosphodiesterase family JG479_RS03280 PF07730 Histidine kinase JG479_RS03285 PF00196 Bacterial regulatory proteins, luxR family JG479_RS03285 PF00072 Response regulator receiver domain JG479_RS03290 PF00378 Enoyl-CoA hydratase/isomerase JG479_RS03295 PF17876 Cold shock domain JG479_RS03295 PF08461 Ribonuclease R winged-helix domain JG479_RS03295 PF08206 Ribonuclease B OB domain JG479_RS03295 PF00773 RNB domain JG479_RS03295 PF00575 S1 RNA binding domain JG479_RS03300 PF00588 SpoU rRNA Methylase family JG479_RS03300 PF08032 RNA 2'-O ribose methyltransferase substrate binding JG479_RS03305 PF07715 TonB-dependent Receptor Plug Domain JG479_RS03310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS03310 PF03466 LysR substrate binding domain JG479_RS03320 PF01571 Aminomethyltransferase folate-binding domain JG479_RS03320 PF08669 Glycine cleavage T-protein C-terminal barrel domain JG479_RS03325 PF01597 Glycine cleavage H-protein JG479_RS03330 PF02347 Glycine cleavage system P-protein JG479_RS03340 PF08878 Domain of unknown function (DUF1837) JG479_RS03340 PF14130 Domain of unknown function (DUF4297) JG479_RS03345 PF00271 Helicase conserved C-terminal domain JG479_RS03385 PF00080 Copper/zinc superoxide dismutase (SODC) JG479_RS03390 PF06150 ChaB JG479_RS03395 PF04336 Acyl carrier protein phosphodiesterase JG479_RS03405 PF01844 HNH endonuclease JG479_RS03410 PF09308 LuxQ, periplasmic JG479_RS03410 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS03410 PF00072 Response regulator receiver domain JG479_RS03415 PF05643 Putative bacterial lipoprotein (DUF799) JG479_RS03425 PF03783 Curli production assembly/transport component CsgG JG479_RS03440 PF02798 Glutathione S-transferase, N-terminal domain JG479_RS03440 PF00043 Glutathione S-transferase, C-terminal domain JG479_RS03455 PF00210 Ferritin-like domain JG479_RS03465 PF05257 CHAP domain JG479_RS03465 PF03738 Glutathionylspermidine synthase preATP-grasp JG479_RS03470 PF05552 Conserved TM helix JG479_RS03470 PF00924 Mechanosensitive ion channel JG479_RS03475 PF18011 C-terminal domain found in long catalases JG479_RS03475 PF06628 Catalase-related immune-responsive JG479_RS03475 PF00199 Catalase JG479_RS03480 PF04828 Glutathione-dependent formaldehyde-activating enzyme JG479_RS03520 PF07715 TonB-dependent Receptor Plug Domain JG479_RS03520 PF00593 TonB dependent receptor JG479_RS03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS03525 PF03466 LysR substrate binding domain JG479_RS03540 PF03466 LysR substrate binding domain JG479_RS03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS03545 PF07687 Peptidase dimerisation domain JG479_RS03545 PF01546 Peptidase family M20/M25/M40 JG479_RS03560 PF07690 Major Facilitator Superfamily JG479_RS03565 PF02311 AraC-like ligand binding domain JG479_RS03565 PF12833 Helix-turn-helix domain JG479_RS03570 PF07715 TonB-dependent Receptor Plug Domain JG479_RS03570 PF00593 TonB dependent receptor JG479_RS03610 PF00171 Aldehyde dehydrogenase family JG479_RS03615 PF00293 NUDIX domain JG479_RS03620 PF00072 Response regulator receiver domain JG479_RS03620 PF00158 Sigma-54 interaction domain JG479_RS03620 PF02954 Bacterial regulatory protein, Fis family JG479_RS03630 PF00360 Phytochrome region JG479_RS03630 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS03630 PF08446 PAS fold JG479_RS03630 PF01590 GAF domain JG479_RS03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS03635 PF00072 Response regulator receiver domain JG479_RS03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS03640 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS03640 PF09308 LuxQ, periplasmic JG479_RS03640 PF00072 Response regulator receiver domain JG479_RS03645 PF01557 Fumarylacetoacetate (FAA) hydrolase family JG479_RS03655 PF00248 Aldo/keto reductase family JG479_RS03665 PF11799 impB/mucB/samB family C-terminal domain JG479_RS03665 PF11798 IMS family HHH motif JG479_RS03665 PF00817 impB/mucB/samB family JG479_RS03670 PF00883 Cytosol aminopeptidase family, catalytic domain JG479_RS03670 PF02789 Cytosol aminopeptidase family, N-terminal domain JG479_RS03675 PF17200 Single Cache domain 2 JG479_RS03675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS03675 PF00672 HAMP domain JG479_RS03680 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region JG479_RS03680 PF00326 Prolyl oligopeptidase family JG479_RS03705 PF07969 Amidohydrolase family JG479_RS03730 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS03740 PF00072 Response regulator receiver domain JG479_RS03740 PF00158 Sigma-54 interaction domain JG479_RS03755 PF01966 HD domain JG479_RS03755 PF01743 Poly A polymerase head domain JG479_RS03755 PF12627 Probable RNA and SrmB- binding site of polymerase A JG479_RS03765 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS03765 PF00672 HAMP domain JG479_RS03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS03765 PF13755 Sensor N-terminal transmembrane domain JG479_RS03765 PF13756 Stimulus-sensing domain JG479_RS03770 PF00072 Response regulator receiver domain JG479_RS03770 PF00486 Transcriptional regulatory protein, C terminal JG479_RS03790 PF00892 EamA-like transporter family JG479_RS03795 PF01472 PUA domain JG479_RS03795 PF00696 Amino acid kinase family JG479_RS03805 PF00749 tRNA synthetases class I (E and Q), catalytic domain JG479_RS03830 PF00271 Helicase conserved C-terminal domain JG479_RS03830 PF00270 DEAD/DEAH box helicase JG479_RS03835 PF13185 GAF domain JG479_RS03835 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS03850 PF00675 Insulinase (Peptidase family M16) JG479_RS03850 PF05193 Peptidase M16 inactive domain JG479_RS03855 PF06426 Serine acetyltransferase, N-terminal JG479_RS03855 PF00132 Bacterial transferase hexapeptide (six repeats) JG479_RS03865 PF02601 Exonuclease VII, large subunit JG479_RS03865 PF13742 OB-fold nucleic acid binding domain JG479_RS03870 PF00478 IMP dehydrogenase / GMP reductase domain JG479_RS03870 PF00571 CBS domain JG479_RS03875 PF00117 Glutamine amidotransferase class-I JG479_RS03875 PF00958 GMP synthase C terminal domain JG479_RS03875 PF02540 NAD synthase JG479_RS03895 PF00072 Response regulator receiver domain JG479_RS03895 PF09308 LuxQ, periplasmic JG479_RS03895 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS03910 PF07690 Major Facilitator Superfamily JG479_RS03915 PF13533 Biotin-lipoyl like JG479_RS03920 PF16658 Class II release factor RF3, C-terminal domain JG479_RS03920 PF00009 Elongation factor Tu GTP binding domain JG479_RS03925 PF03485 Arginyl tRNA synthetase N terminal domain JG479_RS03925 PF05746 DALR anticodon binding domain JG479_RS03925 PF00750 tRNA synthetases class I (R) JG479_RS03930 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JG479_RS03930 PF01243 Pyridoxamine 5'-phosphate oxidase JG479_RS03935 PF01026 TatD related DNase JG479_RS03945 PF18429 Domain of unknown function (DUF5609) JG479_RS03955 PF18073 Rubredoxin metal binding domain JG479_RS03965 PF07687 Peptidase dimerisation domain JG479_RS03965 PF01546 Peptidase family M20/M25/M40 JG479_RS03970 PF02774 Semialdehyde dehydrogenase, dimerisation domain JG479_RS03970 PF01118 Semialdehyde dehydrogenase, NAD binding domain JG479_RS03975 PF00696 Amino acid kinase family JG479_RS03980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JG479_RS03980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JG479_RS03985 PF00764 Arginosuccinate synthase JG479_RS03990 PF00583 Acetyltransferase (GNAT) family JG479_RS03990 PF00206 Lyase JG479_RS03990 PF14698 Argininosuccinate lyase C-terminal JG479_RS04015 PF01467 Cytidylyltransferase-like JG479_RS04020 PF08360 QacR-like protein, C-terminal region JG479_RS04020 PF00440 Bacterial regulatory proteins, tetR family JG479_RS04025 PF02926 THUMP domain JG479_RS04025 PF02568 Thiamine biosynthesis protein (ThiI) JG479_RS04030 PF08546 Ketopantoate reductase PanE/ApbA C terminal JG479_RS04030 PF02558 Ketopantoate reductase PanE/ApbA JG479_RS04040 PF04461 Protein of unknown function (DUF520) JG479_RS04050 PF00593 TonB dependent receptor JG479_RS04050 PF07715 TonB-dependent Receptor Plug Domain JG479_RS04055 PF01625 Peptide methionine sulfoxide reductase JG479_RS04060 PF00873 AcrB/AcrD/AcrF family JG479_RS04065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JG479_RS04065 PF00529 HlyD membrane-fusion protein of T1SS JG479_RS04090 PF01471 Putative peptidoglycan binding domain JG479_RS04090 PF13401 AAA domain JG479_RS04100 PF11871 Domain of unknown function (DUF3391) JG479_RS04100 PF01966 HD domain JG479_RS04105 PF14850 DNA-binding domain of Proline dehydrogenase JG479_RS04105 PF01619 Proline dehydrogenase JG479_RS04105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JG479_RS04105 PF00171 Aldehyde dehydrogenase family JG479_RS04110 PF01037 Lrp/AsnC ligand binding domain JG479_RS04115 PF00360 Phytochrome region JG479_RS04115 PF00563 EAL domain JG479_RS04115 PF01590 GAF domain JG479_RS04115 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS04125 PF00400 WD domain, G-beta repeat JG479_RS04125 PF12894 Anaphase-promoting complex subunit 4 WD40 domain JG479_RS04130 PF00924 Mechanosensitive ion channel JG479_RS04130 PF05552 Conserved TM helix JG479_RS04135 PF04172 LrgB-like family JG479_RS04145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JG479_RS04145 PF00378 Enoyl-CoA hydratase/isomerase JG479_RS04145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JG479_RS04150 PF04269 Protein of unknown function, DUF440 JG479_RS04165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JG479_RS04170 PF01571 Aminomethyltransferase folate-binding domain JG479_RS04175 PF03937 Flavinator of succinate dehydrogenase JG479_RS04180 PF00890 FAD binding domain JG479_RS04180 PF02910 Fumarate reductase flavoprotein C-term JG479_RS04185 PF04542 Sigma-70 region 2 JG479_RS04185 PF08281 Sigma-70, region 4 JG479_RS04195 PF17188 MucB/RseB C-terminal domain JG479_RS04195 PF03888 MucB/RseB N-terminal domain JG479_RS04205 PF00679 Elongation factor G C-terminus JG479_RS04205 PF00009 Elongation factor Tu GTP binding domain JG479_RS04205 PF03144 Elongation factor Tu domain 2 JG479_RS04205 PF06421 GTP-binding protein LepA C-terminus JG479_RS04210 PF10502 Signal peptidase, peptidase S26 JG479_RS04215 PF14622 Ribonuclease-III-like JG479_RS04215 PF00035 Double-stranded RNA binding motif JG479_RS04220 PF01926 50S ribosome-binding GTPase JG479_RS04220 PF07650 KH domain JG479_RS04225 PF02565 Recombination protein O C terminal JG479_RS04225 PF11967 Recombination protein O N terminal JG479_RS04230 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JG479_RS04235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS04235 PF00072 Response regulator receiver domain JG479_RS04235 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS04235 PF00672 HAMP domain JG479_RS04235 PF01627 Hpt domain JG479_RS04240 PF05958 tRNA (Uracil-5-)-methyltransferase JG479_RS04240 PF01938 TRAM domain JG479_RS04245 PF04607 Region found in RelA / SpoT proteins JG479_RS04245 PF13291 ACT domain JG479_RS04245 PF02824 TGS domain JG479_RS04250 PF03819 MazG nucleotide pyrophosphohydrolase domain JG479_RS04255 PF06418 CTP synthase N-terminus JG479_RS04255 PF00117 Glutamine amidotransferase class-I JG479_RS04260 PF00113 Enolase, C-terminal TIM barrel domain JG479_RS04260 PF03952 Enolase, N-terminal domain JG479_RS04265 PF02976 DNA mismatch repair enzyme MutH JG479_RS04270 PF00293 NUDIX domain JG479_RS04275 PF05524 PEP-utilising enzyme, N-terminal JG479_RS04275 PF00391 PEP-utilising enzyme, mobile domain JG479_RS04275 PF01590 GAF domain JG479_RS04275 PF02896 PEP-utilising enzyme, TIM barrel domain JG479_RS04280 PF01925 Sulfite exporter TauE/SafE JG479_RS04285 PF01790 Prolipoprotein diacylglyceryl transferase JG479_RS04290 PF00303 Thymidylate synthase JG479_RS04295 PF00483 Nucleotidyl transferase JG479_RS04340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JG479_RS04340 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS04345 PF08534 Redoxin JG479_RS04345 PF00462 Glutaredoxin JG479_RS04350 PF03466 LysR substrate binding domain JG479_RS04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS04370 PF00563 EAL domain JG479_RS04370 PF12792 CSS motif domain associated with EAL JG479_RS04375 PF00196 Bacterial regulatory proteins, luxR family JG479_RS04375 PF00072 Response regulator receiver domain JG479_RS04380 PF00529 HlyD membrane-fusion protein of T1SS JG479_RS04380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JG479_RS04385 PF03412 Peptidase C39 family JG479_RS04385 PF00005 ABC transporter JG479_RS04385 PF00664 ABC transporter transmembrane region JG479_RS04390 PF02321 Outer membrane efflux protein JG479_RS04415 PF01584 CheW-like domain JG479_RS04415 PF00072 Response regulator receiver domain JG479_RS04420 PF01739 CheR methyltransferase, SAM binding domain JG479_RS04420 PF03705 CheR methyltransferase, all-alpha domain JG479_RS04425 PF00460 Flagella basal body rod protein JG479_RS04430 PF00460 Flagella basal body rod protein JG479_RS04430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JG479_RS04440 PF07559 Flagellar basal body protein FlaE JG479_RS04440 PF00460 Flagella basal body rod protein JG479_RS04440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JG479_RS04445 PF00460 Flagella basal body rod protein JG479_RS04445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JG479_RS04450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JG479_RS04450 PF00460 Flagella basal body rod protein JG479_RS04455 PF02107 Flagellar L-ring protein JG479_RS04460 PF02119 Flagellar P-ring protein JG479_RS04465 PF10135 Rod binding protein JG479_RS04465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JG479_RS04470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JG479_RS04470 PF07196 Flagellin hook IN motif JG479_RS04480 PF00669 Bacterial flagellin N-terminal helical region JG479_RS04480 PF00700 Bacterial flagellin C-terminal helical region JG479_RS04485 PF00700 Bacterial flagellin C-terminal helical region JG479_RS04485 PF00669 Bacterial flagellin N-terminal helical region JG479_RS04490 PF03646 FlaG protein JG479_RS04495 PF02465 Flagellar hook-associated protein 2 N-terminus JG479_RS04495 PF07195 Flagellar hook-associated protein 2 C-terminus JG479_RS04495 PF07196 Flagellin hook IN motif JG479_RS04505 PF02561 Flagellar protein FliS JG479_RS04510 PF02954 Bacterial regulatory protein, Fis family JG479_RS04510 PF06490 Flagellar regulatory protein FleQ JG479_RS04510 PF00158 Sigma-54 interaction domain JG479_RS04515 PF03352 Methyladenine glycosylase JG479_RS04515 PF00958 GMP synthase C terminal domain JG479_RS04515 PF00117 Glutamine amidotransferase class-I JG479_RS04515 PF13673 Acetyltransferase (GNAT) domain JG479_RS04515 PF13302 Acetyltransferase (GNAT) domain JG479_RS04520 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS04520 PF13188 PAS domain JG479_RS04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS04525 PF00072 Response regulator receiver domain JG479_RS04525 PF00158 Sigma-54 interaction domain JG479_RS04525 PF02954 Bacterial regulatory protein, Fis family JG479_RS04530 PF02049 Flagellar hook-basal body complex protein FliE JG479_RS04535 PF01514 Secretory protein of YscJ/FliF family JG479_RS04535 PF08345 Flagellar M-ring protein C-terminal JG479_RS04540 PF14841 FliG middle domain JG479_RS04540 PF01706 FliG C-terminal domain JG479_RS04540 PF14842 FliG N-terminal domain JG479_RS04550 PF18269 T3SS EscN ATPase C-terminal domain JG479_RS04550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JG479_RS04570 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JG479_RS04570 PF02154 Flagellar motor switch protein FliM JG479_RS04575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JG479_RS04580 PF04347 Flagellar biosynthesis protein, FliO JG479_RS04585 PF00813 FliP family JG479_RS04590 PF01313 Bacterial export proteins, family 3 JG479_RS04595 PF01311 Bacterial export proteins, family 1 JG479_RS04600 PF01312 FlhB HrpN YscU SpaS Family JG479_RS04605 PF00771 FHIPEP family JG479_RS04610 PF00448 SRP54-type protein, GTPase domain JG479_RS04615 PF10609 NUBPL iron-transfer P-loop NTPase JG479_RS04620 PF04545 Sigma-70, region 4 JG479_RS04620 PF04539 Sigma-70 region 3 JG479_RS04620 PF04542 Sigma-70 region 2 JG479_RS04625 PF00072 Response regulator receiver domain JG479_RS04630 PF04344 Chemotaxis phosphatase, CheZ JG479_RS04635 PF02895 Signal transducing histidine kinase, homodimeric domain JG479_RS04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS04635 PF00072 Response regulator receiver domain JG479_RS04635 PF01627 Hpt domain JG479_RS04635 PF01584 CheW-like domain JG479_RS04640 PF00072 Response regulator receiver domain JG479_RS04640 PF01339 CheB methylesterase JG479_RS04645 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS04650 PF00691 OmpA family JG479_RS04650 PF13677 Membrane MotB of proton-channel complex MotA/MotB JG479_RS04655 PF13614 AAA domain JG479_RS04665 PF01584 CheW-like domain JG479_RS04685 PF00005 ABC transporter JG479_RS04690 PF03379 CcmB protein JG479_RS04695 PF01578 Cytochrome C assembly protein JG479_RS04700 PF04995 Heme exporter protein D (CcmD) JG479_RS04705 PF03100 CcmE JG479_RS04710 PF01578 Cytochrome C assembly protein JG479_RS04710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JG479_RS04715 PF08534 Redoxin JG479_RS04720 PF03918 Cytochrome C biogenesis protein JG479_RS04725 PF03918 Cytochrome C biogenesis protein JG479_RS04730 PF04333 MlaA lipoprotein JG479_RS04735 PF08668 HDOD domain JG479_RS04735 PF00563 EAL domain JG479_RS04740 PF00474 Sodium:solute symporter family JG479_RS04745 PF07130 YebG protein JG479_RS04760 PF02600 Disulfide bond formation protein DsbB JG479_RS04765 PF00392 Bacterial regulatory proteins, gntR family JG479_RS04765 PF07840 FadR C-terminal domain JG479_RS04770 PF00578 AhpC/TSA family JG479_RS04770 PF10417 C-terminal domain of 1-Cys peroxiredoxin JG479_RS04780 PF01668 SmpB protein JG479_RS04785 PF03364 Polyketide cyclase / dehydrase and lipid transport JG479_RS04790 PF03658 RnfH family Ubiquitin JG479_RS04795 PF04355 SmpA / OmlA family JG479_RS04800 PF01541 GIY-YIG catalytic domain JG479_RS04805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS04805 PF02743 Cache domain JG479_RS04805 PF00672 HAMP domain JG479_RS04810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JG479_RS04810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JG479_RS04815 PF03466 LysR substrate binding domain JG479_RS04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS04820 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS04835 PF00072 Response regulator receiver domain JG479_RS04835 PF00486 Transcriptional regulatory protein, C terminal JG479_RS04840 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS04840 PF00672 HAMP domain JG479_RS04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS04850 PF00999 Sodium/hydrogen exchanger family JG479_RS04855 PF07070 SpoOM protein JG479_RS04860 PF13673 Acetyltransferase (GNAT) domain JG479_RS04865 PF00209 Sodium:neurotransmitter symporter family JG479_RS04870 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS04870 PF16527 Two-component sensor protein CpxA, periplasmic domain JG479_RS04870 PF00672 HAMP domain JG479_RS04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS04875 PF00072 Response regulator receiver domain JG479_RS04875 PF00486 Transcriptional regulatory protein, C terminal JG479_RS04895 PF00144 Beta-lactamase JG479_RS04905 PF01985 CRS1 / YhbY (CRM) domain JG479_RS04910 PF01728 FtsJ-like methyltransferase JG479_RS04915 PF17862 AAA+ lid domain JG479_RS04915 PF06480 FtsH Extracellular JG479_RS04915 PF01434 Peptidase family M41 JG479_RS04915 PF00004 ATPase family associated with various cellular activities (AAA) JG479_RS04920 PF00809 Pterin binding enzyme JG479_RS04925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JG479_RS04925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JG479_RS04925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JG479_RS04925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JG479_RS04930 PF00121 Triosephosphate isomerase JG479_RS04935 PF03840 Preprotein translocase SecG subunit JG479_RS04945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS04945 PF00672 HAMP domain JG479_RS04945 PF02743 Cache domain JG479_RS04960 PF00196 Bacterial regulatory proteins, luxR family JG479_RS04960 PF00072 Response regulator receiver domain JG479_RS04965 PF00593 TonB dependent receptor JG479_RS04965 PF07715 TonB-dependent Receptor Plug Domain JG479_RS04970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JG479_RS04970 PF11890 Domain of unknown function (DUF3410) JG479_RS04970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JG479_RS04975 PF01118 Semialdehyde dehydrogenase, NAD binding domain JG479_RS04975 PF02774 Semialdehyde dehydrogenase, dimerisation domain JG479_RS04985 PF01416 tRNA pseudouridine synthase JG479_RS04990 PF01039 Carboxyl transferase domain JG479_RS04990 PF17848 Acetyl-coA carboxylase zinc finger domain JG479_RS04995 PF08245 Mur ligase middle domain JG479_RS04995 PF02875 Mur ligase family, glutamate ligase domain JG479_RS05005 PF02674 Colicin V production protein JG479_RS05010 PF00156 Phosphoribosyl transferase domain JG479_RS05020 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JG479_RS05030 PF12850 Calcineurin-like phosphoesterase superfamily domain JG479_RS05035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JG479_RS05040 PF09190 DALR domain JG479_RS05040 PF01406 tRNA synthetases class I (C) catalytic domain JG479_RS05045 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JG479_RS05045 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JG479_RS05075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JG479_RS05075 PF05697 Bacterial trigger factor protein (TF) JG479_RS05075 PF05698 Bacterial trigger factor protein (TF) C-terminus JG479_RS05080 PF00574 Clp protease JG479_RS05085 PF06689 ClpX C4-type zinc finger JG479_RS05085 PF07724 AAA domain (Cdc48 subfamily) JG479_RS05085 PF10431 C-terminal, D2-small domain, of ClpB protein JG479_RS05090 PF00004 ATPase family associated with various cellular activities (AAA) JG479_RS05090 PF05362 Lon protease (S16) C-terminal proteolytic domain JG479_RS05090 PF02190 ATP-dependent protease La (LON) substrate-binding domain JG479_RS05095 PF00216 Bacterial DNA-binding protein JG479_RS05100 PF13145 PPIC-type PPIASE domain JG479_RS05110 PF00005 ABC transporter JG479_RS05115 PF00005 ABC transporter JG479_RS05115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JG479_RS05120 PF12911 N-terminal TM domain of oligopeptide transport permease C JG479_RS05120 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS05125 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS05130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JG479_RS05135 PF02954 Bacterial regulatory protein, Fis family JG479_RS05135 PF00158 Sigma-54 interaction domain JG479_RS05140 PF04012 PspA/IM30 family JG479_RS05145 PF06667 Phage shock protein B JG479_RS05150 PF04024 PspC domain JG479_RS05155 PF04317 YcjX-like family, DUF463 JG479_RS05160 PF05128 Domain of unknown function (DUF697) JG479_RS05165 PF01053 Cys/Met metabolism PLP-dependent enzyme JG479_RS05170 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JG479_RS05175 PF01329 Pterin 4 alpha carbinolamine dehydratase JG479_RS05180 PF02028 BCCT, betaine/carnitine/choline family transporter JG479_RS05190 PF00132 Bacterial transferase hexapeptide (six repeats) JG479_RS05190 PF14602 Hexapeptide repeat of succinyl-transferase JG479_RS05190 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JG479_RS05195 PF08335 GlnD PII-uridylyltransferase JG479_RS05195 PF01909 Nucleotidyltransferase domain JG479_RS05195 PF01966 HD domain JG479_RS05200 PF00557 Metallopeptidase family M24 JG479_RS05205 PF00318 Ribosomal protein S2 JG479_RS05210 PF00889 Elongation factor TS JG479_RS05215 PF00696 Amino acid kinase family JG479_RS05220 PF01765 Ribosome recycling factor JG479_RS05225 PF01255 Putative undecaprenyl diphosphate synthase JG479_RS05235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JG479_RS05235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JG479_RS05235 PF13288 DXP reductoisomerase C-terminal domain JG479_RS05240 PF02163 Peptidase family M50 JG479_RS05240 PF17820 PDZ domain JG479_RS05245 PF01103 Surface antigen JG479_RS05245 PF07244 Surface antigen variable number repeat JG479_RS05250 PF03938 Outer membrane protein (OmpH-like) JG479_RS05255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JG479_RS05255 PF00132 Bacterial transferase hexapeptide (six repeats) JG479_RS05260 PF07977 FabA-like domain JG479_RS05265 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JG479_RS05265 PF00132 Bacterial transferase hexapeptide (six repeats) JG479_RS05270 PF03330 Lytic transglycolase JG479_RS05275 PF00005 ABC transporter JG479_RS05275 PF00664 ABC transporter transmembrane region JG479_RS05280 PF00664 ABC transporter transmembrane region JG479_RS05280 PF00005 ABC transporter JG479_RS05285 PF08173 Membrane bound YbgT-like protein JG479_RS05290 PF02322 Cytochrome bd terminal oxidase subunit II JG479_RS05295 PF01654 Cytochrome bd terminal oxidase subunit I JG479_RS05300 PF02684 Lipid-A-disaccharide synthetase JG479_RS05305 PF01351 Ribonuclease HII JG479_RS05310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JG479_RS05310 PF14579 Helix-hairpin-helix motif JG479_RS05310 PF02811 PHP domain JG479_RS05310 PF01336 OB-fold nucleic acid binding domain JG479_RS05310 PF07733 Bacterial DNA polymerase III alpha NTPase domain JG479_RS05315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JG479_RS05320 PF01171 PP-loop family JG479_RS05320 PF09179 TilS substrate binding domain JG479_RS05320 PF11734 TilS substrate C-terminal domain JG479_RS05330 PF03707 Bacterial signalling protein N terminal repeat JG479_RS05330 PF00563 EAL domain JG479_RS05330 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS05335 PF02254 TrkA-N domain JG479_RS05335 PF00999 Sodium/hydrogen exchanger family JG479_RS05335 PF02080 TrkA-C domain JG479_RS05355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JG479_RS05355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JG479_RS05365 PF07715 TonB-dependent Receptor Plug Domain JG479_RS05365 PF00593 TonB dependent receptor JG479_RS05370 PF05552 Conserved TM helix JG479_RS05370 PF00924 Mechanosensitive ion channel JG479_RS05380 PF04143 Sulphur transport JG479_RS05390 PF00083 Sugar (and other) transporter JG479_RS05415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JG479_RS05415 PF11490 DNA polymerase III polC-type N-terminus II JG479_RS05415 PF02811 PHP domain JG479_RS05415 PF00929 Exonuclease JG479_RS05415 PF07733 Bacterial DNA polymerase III alpha NTPase domain JG479_RS05415 PF14579 Helix-hairpin-helix motif JG479_RS05415 PF01336 OB-fold nucleic acid binding domain JG479_RS05430 PF10689 Protein of unknown function (DUF2496) JG479_RS05440 PF00850 Histone deacetylase domain JG479_RS05450 PF01925 Sulfite exporter TauE/SafE JG479_RS05455 PF13307 Helicase C-terminal domain JG479_RS05455 PF06733 DEAD_2 JG479_RS05460 PF00136 DNA polymerase family B JG479_RS05460 PF03104 DNA polymerase family B, exonuclease domain JG479_RS05465 PF07715 TonB-dependent Receptor Plug Domain JG479_RS05465 PF00593 TonB dependent receptor JG479_RS05470 PF08241 Methyltransferase domain JG479_RS05475 PF00593 TonB dependent receptor JG479_RS05475 PF07715 TonB-dependent Receptor Plug Domain JG479_RS05495 PF00271 Helicase conserved C-terminal domain JG479_RS05495 PF04851 Type III restriction enzyme, res subunit JG479_RS05505 PF07244 Surface antigen variable number repeat JG479_RS05505 PF17243 POTRA domain TamA domain 1 JG479_RS05505 PF01103 Surface antigen JG479_RS05510 PF04357 TamB, inner membrane protein subunit of TAM complex JG479_RS05520 PF14489 QueF-like protein JG479_RS05520 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JG479_RS05525 PF07348 Syd protein (SUKH-2) JG479_RS05530 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) JG479_RS05560 PF04287 tRNA pseudouridine synthase C JG479_RS05565 PF00849 RNA pseudouridylate synthase JG479_RS05570 PF00258 Flavodoxin JG479_RS05710 PF02938 GAD domain JG479_RS05710 PF00152 tRNA synthetases class II (D, K and N) JG479_RS05710 PF01336 OB-fold nucleic acid binding domain JG479_RS05910 PF00308 Bacterial dnaA protein JG479_RS05915 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JG479_RS05915 PF01409 tRNA synthetases class II core domain (F) JG479_RS05920 PF03483 B3/4 domain JG479_RS05920 PF03147 Ferredoxin-fold anticodon binding domain JG479_RS05920 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JG479_RS05920 PF03484 tRNA synthetase B5 domain JG479_RS05920 PF01588 Putative tRNA binding domain JG479_RS05925 PF00216 Bacterial DNA-binding protein JG479_RS05935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JG479_RS05935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JG479_RS05940 PF00246 Zinc carboxypeptidase JG479_RS05940 PF18027 Cytosolic carboxypeptidase N-terminal domain JG479_RS05945 PF01235 Sodium:alanine symporter family JG479_RS05955 PF07023 Protein of unknown function (DUF1315) JG479_RS05970 PF03109 ABC1 family JG479_RS05975 PF01590 GAF domain JG479_RS05975 PF00158 Sigma-54 interaction domain JG479_RS05980 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JG479_RS05980 PF13746 4Fe-4S dicluster domain JG479_RS05980 PF12801 4Fe-4S binding domain JG479_RS06000 PF12462 DNA helicase IV / RNA helicase N terminal JG479_RS06000 PF00580 UvrD/REP helicase N-terminal domain JG479_RS06000 PF13361 UvrD-like helicase C-terminal domain JG479_RS06005 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS06005 PF00563 EAL domain JG479_RS06005 PF03707 Bacterial signalling protein N terminal repeat JG479_RS06025 PF03575 Peptidase family S51 JG479_RS06040 PF13472 GDSL-like Lipase/Acylhydrolase family JG479_RS06045 PF00005 ABC transporter JG479_RS06055 PF02075 Crossover junction endodeoxyribonuclease RuvC JG479_RS06060 PF07499 RuvA, C-terminal domain JG479_RS06060 PF01330 RuvA N terminal domain JG479_RS06065 PF05496 Holliday junction DNA helicase RuvB P-loop domain JG479_RS06065 PF05491 RuvB C-terminal winged helix domain JG479_RS06065 PF17864 RuvB AAA lid domain JG479_RS06070 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS06075 PF02472 Biopolymer transport protein ExbD/TolR JG479_RS06085 PF07676 WD40-like Beta Propeller Repeat JG479_RS06085 PF04052 TolB amino-terminal domain JG479_RS06090 PF00691 OmpA family JG479_RS06095 PF13525 Outer membrane lipoprotein JG479_RS06095 PF16331 TolA binding protein trimerisation JG479_RS06140 PF02445 Quinolinate synthetase A protein JG479_RS06150 PF09308 LuxQ, periplasmic JG479_RS06150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS06150 PF00072 Response regulator receiver domain JG479_RS06150 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS06160 PF12697 Alpha/beta hydrolase family JG479_RS06165 PF00701 Dihydrodipicolinate synthetase family JG479_RS06185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JG479_RS06205 PF17946 RecC C-terminal domain JG479_RS06210 PF00580 UvrD/REP helicase N-terminal domain JG479_RS06210 PF12705 PD-(D/E)XK nuclease superfamily JG479_RS06210 PF13361 UvrD-like helicase C-terminal domain JG479_RS06215 PF13538 UvrD-like helicase C-terminal domain JG479_RS06220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS06220 PF08447 PAS fold JG479_RS06220 PF13426 PAS domain JG479_RS06235 PF01171 PP-loop family JG479_RS06240 PF00582 Universal stress protein family JG479_RS06245 PF13545 Crp-like helix-turn-helix domain JG479_RS06245 PF00027 Cyclic nucleotide-binding domain JG479_RS06260 PF00403 Heavy-metal-associated domain JG479_RS06270 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JG479_RS06270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JG479_RS06285 PF00115 Cytochrome C and Quinol oxidase polypeptide I JG479_RS06295 PF00593 TonB dependent receptor JG479_RS06295 PF07715 TonB-dependent Receptor Plug Domain JG479_RS06315 PF02559 CarD-like/TRCF domain JG479_RS06315 PF00270 DEAD/DEAH box helicase JG479_RS06315 PF00271 Helicase conserved C-terminal domain JG479_RS06315 PF17757 UvrB interaction domain JG479_RS06315 PF03461 TRCF domain JG479_RS06320 PF00795 Carbon-nitrogen hydrolase JG479_RS06325 PF04371 Porphyromonas-type peptidyl-arginine deiminase JG479_RS06335 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS06345 PF03466 LysR substrate binding domain JG479_RS06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS06365 PF00593 TonB dependent receptor JG479_RS06365 PF07715 TonB-dependent Receptor Plug Domain JG479_RS06370 PF02472 Biopolymer transport protein ExbD/TolR JG479_RS06380 PF03466 LysR substrate binding domain JG479_RS06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS06385 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JG479_RS06395 PF00884 Sulfatase JG479_RS06395 PF11893 Domain of unknown function (DUF3413) JG479_RS06400 PF07208 Protein of unknown function (DUF1414) JG479_RS06405 PF04245 37-kD nucleoid-associated bacterial protein JG479_RS06410 PF10150 Ribonuclease E/G family JG479_RS06410 PF12111 Polyribonucleotide phosphorylase C terminal JG479_RS06410 PF00575 S1 RNA binding domain JG479_RS06415 PF01479 S4 domain JG479_RS06415 PF00849 RNA pseudouridylate synthase JG479_RS06430 PF02545 Maf-like protein JG479_RS06435 PF02620 Large ribosomal RNA subunit accumulation protein YceD JG479_RS06440 PF01783 Ribosomal L32p protein family JG479_RS06445 PF02504 Fatty acid synthesis protein JG479_RS06450 PF00698 Acyl transferase domain JG479_RS06460 PF00550 Phosphopantetheine attachment site JG479_RS06465 PF02801 Beta-ketoacyl synthase, C-terminal domain JG479_RS06465 PF00109 Beta-ketoacyl synthase, N-terminal domain JG479_RS06470 PF01063 Amino-transferase class IV JG479_RS06475 PF02618 YceG-like family JG479_RS06480 PF02223 Thymidylate kinase JG479_RS06485 PF09115 DNA polymerase III, delta subunit, C terminal JG479_RS06495 PF01026 TatD related DNase JG479_RS06515 PF00989 PAS fold JG479_RS06515 PF00563 EAL domain JG479_RS06515 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS06515 PF01590 GAF domain JG479_RS06525 PF00483 Nucleotidyl transferase JG479_RS06535 PF01370 NAD dependent epimerase/dehydratase family JG479_RS06540 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JG479_RS06540 PF00535 Glycosyl transferase family 2 JG479_RS06550 PF01757 Acyltransferase family JG479_RS06560 PF13477 Glycosyl transferase 4-like JG479_RS06560 PF00534 Glycosyl transferases group 1 JG479_RS06570 PF00132 Bacterial transferase hexapeptide (six repeats) JG479_RS06575 PF00534 Glycosyl transferases group 1 JG479_RS06575 PF13439 Glycosyltransferase Family 4 JG479_RS06585 PF01757 Acyltransferase family JG479_RS06595 PF02397 Bacterial sugar transferase JG479_RS06605 PF02563 Polysaccharide biosynthesis/export protein JG479_RS06610 PF13614 AAA domain JG479_RS06610 PF13807 G-rich domain on putative tyrosine kinase JG479_RS06610 PF02706 Chain length determinant protein JG479_RS06625 PF01757 Acyltransferase family JG479_RS06630 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JG479_RS06630 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JG479_RS06630 PF01189 16S rRNA methyltransferase RsmB/F JG479_RS06635 PF00392 Bacterial regulatory proteins, gntR family JG479_RS06635 PF07729 FCD domain JG479_RS06645 PF00285 Citrate synthase, C-terminal domain JG479_RS06650 PF00330 Aconitase family (aconitate hydratase) JG479_RS06650 PF00694 Aconitase C-terminal domain JG479_RS06655 PF04303 PrpF protein JG479_RS06680 PF04279 Intracellular septation protein A JG479_RS06685 PF00216 Bacterial DNA-binding protein JG479_RS06690 PF01965 DJ-1/PfpI family JG479_RS06695 PF00290 Tryptophan synthase alpha chain JG479_RS06700 PF00291 Pyridoxal-phosphate dependent enzyme JG479_RS06705 PF00218 Indole-3-glycerol phosphate synthase JG479_RS06705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JG479_RS06710 PF00591 Glycosyl transferase family, a/b domain JG479_RS06710 PF02885 Glycosyl transferase family, helical bundle domain JG479_RS06715 PF00117 Glutamine amidotransferase class-I JG479_RS06720 PF00425 chorismate binding enzyme JG479_RS06720 PF04715 Anthranilate synthase component I, N terminal region JG479_RS06725 PF02811 PHP domain JG479_RS06730 PF01300 Telomere recombination JG479_RS06735 PF02616 Segregation and condensation protein ScpA JG479_RS06740 PF01292 Prokaryotic cytochrome b561 JG479_RS06745 PF04264 YceI-like domain JG479_RS06770 PF00180 Isocitrate/isopropylmalate dehydrogenase JG479_RS06790 PF03466 LysR substrate binding domain JG479_RS06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS06795 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JG479_RS06800 PF00107 Zinc-binding dehydrogenase JG479_RS06810 PF10502 Signal peptidase, peptidase S26 JG479_RS06815 PF01081 KDPG and KHG aldolase JG479_RS06820 PF08386 TAP-like protein JG479_RS06820 PF00561 alpha/beta hydrolase fold JG479_RS06825 PF08448 PAS fold JG479_RS06825 PF00563 EAL domain JG479_RS06825 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS06825 PF08447 PAS fold JG479_RS06830 PF08264 Anticodon-binding domain of tRNA JG479_RS06830 PF09334 tRNA synthetases class I (M) JG479_RS06830 PF01588 Putative tRNA binding domain JG479_RS06835 PF10609 NUBPL iron-transfer P-loop NTPase JG479_RS06840 PF00692 dUTPase JG479_RS06860 PF00155 Aminotransferase class I and II JG479_RS06865 PF05433 Glycine zipper 2TM domain JG479_RS06870 PF13036 Peptidoglycan-synthase activator LpoB JG479_RS06890 PF05114 Protein of unknown function (DUF692) JG479_RS06900 PF00892 EamA-like transporter family JG479_RS06905 PF02557 D-alanyl-D-alanine carboxypeptidase JG479_RS06910 PF01546 Peptidase family M20/M25/M40 JG479_RS06910 PF07687 Peptidase dimerisation domain JG479_RS06915 PF03960 ArsC family JG479_RS06930 PF07085 DRTGG domain JG479_RS06930 PF01515 Phosphate acetyl/butaryl transferase JG479_RS06935 PF00871 Acetokinase family JG479_RS06940 PF04217 Protein of unknown function, DUF412 JG479_RS06945 PF13847 Methyltransferase domain JG479_RS06955 PF03372 Endonuclease/Exonuclease/phosphatase family JG479_RS06970 PF04079 Segregation and condensation complex subunit ScpB JG479_RS06975 PF00849 RNA pseudouridylate synthase JG479_RS06975 PF01479 S4 domain JG479_RS06980 PF00106 short chain dehydrogenase JG479_RS06985 PF12262 Bacterial virulence factor lipase N-terminal JG479_RS06990 PF01343 Peptidase family S49 JG479_RS06990 PF08496 Peptidase family S49 N-terminal JG479_RS06995 PF00375 Sodium:dicarboxylate symporter family JG479_RS07005 PF01396 Topoisomerase DNA binding C4 zinc finger JG479_RS07005 PF08272 Topoisomerase I zinc-ribbon-like JG479_RS07005 PF01131 DNA topoisomerase JG479_RS07005 PF01751 Toprim domain JG479_RS07015 PF00128 Alpha amylase, catalytic domain JG479_RS07025 PF04820 Tryptophan halogenase JG479_RS07030 PF00128 Alpha amylase, catalytic domain JG479_RS07030 PF10438 Cyclo-malto-dextrinase C-terminal domain JG479_RS07030 PF09087 Cyclomaltodextrinase, N-terminal JG479_RS07035 PF02903 Alpha amylase, N-terminal ig-like domain JG479_RS07035 PF00128 Alpha amylase, catalytic domain JG479_RS07035 PF16657 Maltogenic Amylase, C-terminal domain JG479_RS07045 PF09137 Glucodextranase, domain N JG479_RS07045 PF00723 Glycosyl hydrolases family 15 JG479_RS07050 PF00593 TonB dependent receptor JG479_RS07055 PF00356 Bacterial regulatory proteins, lacI family JG479_RS07060 PF02685 Glucokinase JG479_RS07065 PF00356 Bacterial regulatory proteins, lacI family JG479_RS07070 PF00920 Dehydratase family JG479_RS07075 PF01081 KDPG and KHG aldolase JG479_RS07080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JG479_RS07080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JG479_RS07095 PF01709 Transcriptional regulator JG479_RS07100 PF05649 Peptidase family M13 JG479_RS07100 PF01431 Peptidase family M13 JG479_RS07105 PF00664 ABC transporter transmembrane region JG479_RS07105 PF00005 ABC transporter JG479_RS07120 PF02355 Protein export membrane protein JG479_RS07120 PF07549 SecD/SecF GG Motif JG479_RS07120 PF13721 SecD export protein N-terminal TM region JG479_RS07125 PF02355 Protein export membrane protein JG479_RS07125 PF07549 SecD/SecF GG Motif JG479_RS07150 PF03831 PhnA domain JG479_RS07150 PF08274 PhnA Zinc-Ribbon JG479_RS07155 PF18030 RimK PreATP-grasp domain JG479_RS07155 PF08443 RimK-like ATP-grasp domain JG479_RS07165 PF02308 MgtC family JG479_RS07175 PF12833 Helix-turn-helix domain JG479_RS07180 PF00109 Beta-ketoacyl synthase, N-terminal domain JG479_RS07180 PF02801 Beta-ketoacyl synthase, C-terminal domain JG479_RS07195 PF02308 MgtC family JG479_RS07205 PF00756 Putative esterase JG479_RS07210 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS07210 PF00107 Zinc-binding dehydrogenase JG479_RS07215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS07215 PF03466 LysR substrate binding domain JG479_RS07220 PF02687 FtsX-like permease family JG479_RS07220 PF12704 MacB-like periplasmic core domain JG479_RS07225 PF00005 ABC transporter JG479_RS07230 PF12704 MacB-like periplasmic core domain JG479_RS07230 PF02687 FtsX-like permease family JG479_RS07235 PF07308 Protein of unknown function (DUF1456) JG479_RS07240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JG479_RS07240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JG479_RS07245 PF01926 50S ribosome-binding GTPase JG479_RS07245 PF13167 GTP-binding GTPase N-terminal JG479_RS07245 PF16360 GTP-binding GTPase Middle Region JG479_RS07250 PF00501 AMP-binding enzyme JG479_RS07250 PF13193 AMP-binding enzyme C-terminal domain JG479_RS07260 PF02824 TGS domain JG479_RS07260 PF03129 Anticodon binding domain JG479_RS07260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JG479_RS07260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JG479_RS07265 PF00707 Translation initiation factor IF-3, C-terminal domain JG479_RS07265 PF05198 Translation initiation factor IF-3, N-terminal domain JG479_RS07270 PF01632 Ribosomal protein L35 JG479_RS07275 PF00453 Ribosomal protein L20 JG479_RS07285 PF00753 Metallo-beta-lactamase superfamily JG479_RS07290 PF13404 AsnC-type helix-turn-helix domain JG479_RS07290 PF01037 Lrp/AsnC ligand binding domain JG479_RS07295 PF01740 STAS domain JG479_RS07295 PF00916 Sulfate permease family JG479_RS07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS07300 PF06580 Histidine kinase JG479_RS07300 PF02743 Cache domain JG479_RS07300 PF00672 HAMP domain JG479_RS07305 PF04397 LytTr DNA-binding domain JG479_RS07305 PF00072 Response regulator receiver domain JG479_RS07310 PF00224 Pyruvate kinase, barrel domain JG479_RS07310 PF02887 Pyruvate kinase, alpha/beta domain JG479_RS07315 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JG479_RS07315 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JG479_RS07320 PF00710 Asparaginase, N-terminal JG479_RS07320 PF17763 Glutaminase/Asparaginase C-terminal domain JG479_RS07325 PF01343 Peptidase family S49 JG479_RS07330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JG479_RS07330 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS07340 PF00881 Nitroreductase family JG479_RS07360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JG479_RS07360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JG479_RS07365 PF00593 TonB dependent receptor JG479_RS07365 PF07715 TonB-dependent Receptor Plug Domain JG479_RS07385 PF00561 alpha/beta hydrolase fold JG479_RS07405 PF06940 Domain of unknown function (DUF1287) JG479_RS07410 PF00111 2Fe-2S iron-sulfur cluster binding domain JG479_RS07410 PF00970 Oxidoreductase FAD-binding domain JG479_RS07415 PF00268 Ribonucleotide reductase, small chain JG479_RS07420 PF00317 Ribonucleotide reductase, all-alpha domain JG479_RS07420 PF02867 Ribonucleotide reductase, barrel domain JG479_RS07420 PF03477 ATP cone domain JG479_RS07425 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS07435 PF00521 DNA gyrase/topoisomerase IV, subunit A JG479_RS07435 PF03989 DNA gyrase C-terminal domain, beta-propeller JG479_RS07440 PF00266 Aminotransferase class-V JG479_RS07445 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JG479_RS07450 PF02224 Cytidylate kinase JG479_RS07455 PF00575 S1 RNA binding domain JG479_RS07460 PF00216 Bacterial DNA-binding protein JG479_RS07470 PF18073 Rubredoxin metal binding domain JG479_RS07475 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JG479_RS07485 PF17783 CvfB-like winged helix domain JG479_RS07485 PF13509 S1 domain JG479_RS07490 PF00270 DEAD/DEAH box helicase JG479_RS07490 PF00271 Helicase conserved C-terminal domain JG479_RS07495 PF17773 UPF0176 acylphosphatase like domain JG479_RS07495 PF00581 Rhodanese-like domain JG479_RS07500 PF00571 CBS domain JG479_RS07500 PF01380 SIS domain JG479_RS07505 PF02811 PHP domain JG479_RS07505 PF14579 Helix-hairpin-helix motif JG479_RS07505 PF00929 Exonuclease JG479_RS07505 PF07733 Bacterial DNA polymerase III alpha NTPase domain JG479_RS07505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JG479_RS07510 PF02028 BCCT, betaine/carnitine/choline family transporter JG479_RS07515 PF12867 DinB superfamily JG479_RS07515 PF03781 Sulfatase-modifying factor enzyme 1 JG479_RS07520 PF10017 Histidine-specific methyltransferase, SAM-dependent JG479_RS07530 PF13537 Glutamine amidotransferase domain JG479_RS07530 PF00733 Asparagine synthase JG479_RS07535 PF01470 Pyroglutamyl peptidase JG479_RS07545 PF02626 Carboxyltransferase domain, subdomain A and B JG479_RS07550 PF02682 Carboxyltransferase domain, subdomain C and D JG479_RS07555 PF01625 Peptide methionine sulfoxide reductase JG479_RS07555 PF01641 SelR domain JG479_RS07565 PF03466 LysR substrate binding domain JG479_RS07565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS07570 PF01144 Coenzyme A transferase JG479_RS07575 PF01144 Coenzyme A transferase JG479_RS07580 PF00682 HMGL-like JG479_RS07585 PF00364 Biotin-requiring enzyme JG479_RS07585 PF18140 Propionyl-coenzyme A carboxylase BT domain JG479_RS07585 PF00289 Biotin carboxylase, N-terminal domain JG479_RS07585 PF02785 Biotin carboxylase C-terminal domain JG479_RS07585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JG479_RS07595 PF01039 Carboxyl transferase domain JG479_RS07600 PF02770 Acyl-CoA dehydrogenase, middle domain JG479_RS07600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JG479_RS07600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JG479_RS07605 PF09278 MerR, DNA binding JG479_RS07605 PF00376 MerR family regulatory protein JG479_RS07610 PF00108 Thiolase, N-terminal domain JG479_RS07610 PF02803 Thiolase, C-terminal domain JG479_RS07615 PF00171 Aldehyde dehydrogenase family JG479_RS07620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JG479_RS07620 PF02770 Acyl-CoA dehydrogenase, middle domain JG479_RS07620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JG479_RS07625 PF00378 Enoyl-CoA hydratase/isomerase JG479_RS07630 PF00378 Enoyl-CoA hydratase/isomerase JG479_RS07635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JG479_RS07635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JG479_RS07655 PF03992 Antibiotic biosynthesis monooxygenase JG479_RS07700 PF01717 Cobalamin-independent synthase, Catalytic domain JG479_RS07700 PF08267 Cobalamin-independent synthase, N-terminal domain JG479_RS07770 PF09905 DNA-binding protein VF530 JG479_RS07775 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS07775 PF00107 Zinc-binding dehydrogenase JG479_RS07780 PF16925 Tetracyclin repressor-like, C-terminal domain JG479_RS07780 PF00440 Bacterial regulatory proteins, tetR family JG479_RS07785 PF04957 Ribosome modulation factor JG479_RS07790 PF07977 FabA-like domain JG479_RS07800 PF01551 Peptidase family M23 JG479_RS07800 PF08460 Bacterial SH3 domain JG479_RS07805 PF03061 Thioesterase superfamily JG479_RS07810 PF03553 Na+/H+ antiporter family JG479_RS07810 PF13726 Na+-H+ antiporter family JG479_RS07815 PF01841 Transglutaminase-like superfamily JG479_RS07815 PF13559 Domain of unknown function (DUF4129) JG479_RS07815 PF11992 Domain of unknown function (DUF3488) JG479_RS07825 PF17863 AAA lid domain JG479_RS07825 PF07726 ATPase family associated with various cellular activities (AAA) JG479_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS07850 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS07855 PF00005 ABC transporter JG479_RS07855 PF08402 TOBE domain JG479_RS07865 PF00561 alpha/beta hydrolase fold JG479_RS07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS07870 PF00072 Response regulator receiver domain JG479_RS07870 PF09308 LuxQ, periplasmic JG479_RS07870 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS07875 PF09308 LuxQ, periplasmic JG479_RS07875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS07875 PF00072 Response regulator receiver domain JG479_RS07875 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS07895 PF00437 Type II/IV secretion system protein JG479_RS07935 PF10011 Predicted membrane protein (DUF2254) JG479_RS07945 PF00390 Malic enzyme, N-terminal domain JG479_RS07945 PF03949 Malic enzyme, NAD binding domain JG479_RS07970 PF02222 ATP-grasp domain JG479_RS07970 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JG479_RS07975 PF00731 AIR carboxylase JG479_RS07980 PF00005 ABC transporter JG479_RS07980 PF12848 ABC transporter JG479_RS08020 PF01625 Peptide methionine sulfoxide reductase JG479_RS08040 PF13188 PAS domain JG479_RS08040 PF00563 EAL domain JG479_RS08040 PF03707 Bacterial signalling protein N terminal repeat JG479_RS08040 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS08075 PF03773 Predicted permease JG479_RS08085 PF03458 UPF0126 domain JG479_RS08100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JG479_RS08110 PF01435 Peptidase family M48 JG479_RS08125 PF08241 Methyltransferase domain JG479_RS08130 PF00155 Aminotransferase class I and II JG479_RS08135 PF04055 Radical SAM superfamily JG479_RS08135 PF06968 Biotin and Thiamin Synthesis associated domain JG479_RS08140 PF00202 Aminotransferase class-III JG479_RS08155 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS08160 PF00005 ABC transporter JG479_RS08160 PF08402 TOBE domain JG479_RS08165 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS08165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS08165 PF00989 PAS fold JG479_RS08170 PF00072 Response regulator receiver domain JG479_RS08175 PF00072 Response regulator receiver domain JG479_RS08185 PF01336 OB-fold nucleic acid binding domain JG479_RS08185 PF00152 tRNA synthetases class II (D, K and N) JG479_RS08190 PF00766 Electron transfer flavoprotein FAD-binding domain JG479_RS08190 PF01012 Electron transfer flavoprotein domain JG479_RS08195 PF01012 Electron transfer flavoprotein domain JG479_RS08215 PF01980 tRNA-methyltransferase O JG479_RS08215 PF18389 TrmO C-terminal domain JG479_RS08220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JG479_RS08220 PF04073 Aminoacyl-tRNA editing domain JG479_RS08220 PF03129 Anticodon binding domain JG479_RS08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS08230 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS08230 PF00672 HAMP domain JG479_RS08230 PF01627 Hpt domain JG479_RS08230 PF00072 Response regulator receiver domain JG479_RS08230 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS08235 PF12679 ABC-2 family transporter protein JG479_RS08240 PF00005 ABC transporter JG479_RS08260 PF05656 Protein of unknown function (DUF805) JG479_RS08265 PF02817 e3 binding domain JG479_RS08265 PF00364 Biotin-requiring enzyme JG479_RS08265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JG479_RS08270 PF02780 Transketolase, C-terminal domain JG479_RS08270 PF02779 Transketolase, pyrimidine binding domain JG479_RS08275 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal JG479_RS08275 PF00676 Dehydrogenase E1 component JG479_RS08280 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JG479_RS08285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JG479_RS08285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JG479_RS08285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JG479_RS08285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JG479_RS08290 PF17206 SeqA protein N-terminal domain JG479_RS08290 PF03925 SeqA protein C-terminal domain JG479_RS08295 PF12697 Alpha/beta hydrolase family JG479_RS08305 PF01402 Ribbon-helix-helix protein, copG family JG479_RS08310 PF00258 Flavodoxin JG479_RS08315 PF01475 Ferric uptake regulator family JG479_RS08320 PF00749 tRNA synthetases class I (E and Q), catalytic domain JG479_RS08320 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JG479_RS08330 PF02629 CoA binding domain JG479_RS08330 PF00549 CoA-ligase JG479_RS08335 PF00549 CoA-ligase JG479_RS08335 PF08442 ATP-grasp domain JG479_RS08340 PF02817 e3 binding domain JG479_RS08340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JG479_RS08340 PF00364 Biotin-requiring enzyme JG479_RS08345 PF16870 2-oxoglutarate dehydrogenase C-terminal JG479_RS08345 PF00676 Dehydrogenase E1 component JG479_RS08345 PF16078 2-oxoglutarate dehydrogenase N-terminus JG479_RS08345 PF02779 Transketolase, pyrimidine binding domain JG479_RS08350 PF13085 2Fe-2S iron-sulfur cluster binding domain JG479_RS08355 PF00890 FAD binding domain JG479_RS08355 PF02910 Fumarate reductase flavoprotein C-term JG479_RS08360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JG479_RS08365 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JG479_RS08370 PF00285 Citrate synthase, C-terminal domain JG479_RS08375 PF00266 Aminotransferase class-V JG479_RS08380 PF02657 Fe-S metabolism associated domain JG479_RS08385 PF00899 ThiF family JG479_RS08390 PF00849 RNA pseudouridylate synthase JG479_RS08395 PF02348 Cytidylyltransferase JG479_RS08400 PF03966 Trm112p-like protein JG479_RS08405 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JG479_RS08410 PF00005 ABC transporter JG479_RS08410 PF00664 ABC transporter transmembrane region JG479_RS08415 PF00753 Metallo-beta-lactamase superfamily JG479_RS08415 PF13567 Domain of unknown function (DUF4131) JG479_RS08415 PF03772 Competence protein JG479_RS08430 PF00005 ABC transporter JG479_RS08430 PF12848 ABC transporter JG479_RS08430 PF16326 ABC transporter C-terminal domain JG479_RS08440 PF02926 THUMP domain JG479_RS08440 PF01170 Putative RNA methylase family UPF0020 JG479_RS08440 PF10672 S-adenosylmethionine-dependent methyltransferase JG479_RS08445 PF07126 Cell-division protein ZapC JG479_RS08450 PF01180 Dihydroorotate dehydrogenase JG479_RS08455 PF05088 Bacterial NAD-glutamate dehydrogenase JG479_RS08465 PF14870 Photosynthesis system II assembly factor YCF48 JG479_RS08470 PF07044 Protein of unknown function (DUF1329) JG479_RS08485 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JG479_RS08485 PF01433 Peptidase family M1 domain JG479_RS08485 PF11940 Domain of unknown function (DUF3458) Ig-like fold JG479_RS08490 PF03553 Na+/H+ antiporter family JG479_RS08495 PF11818 C-terminal domain of tail specific protease (DUF3340) JG479_RS08495 PF00595 PDZ domain JG479_RS08495 PF03572 Peptidase family S41 JG479_RS08495 PF17804 Tail specific protease N-terminal domain JG479_RS08500 PF04352 ProQ/FINO family JG479_RS08500 PF17516 ProQ C-terminal domain JG479_RS08510 PF13185 GAF domain JG479_RS08530 PF00072 Response regulator receiver domain JG479_RS08530 PF04397 LytTr DNA-binding domain JG479_RS08545 PF01027 Inhibitor of apoptosis-promoting Bax1 JG479_RS08550 PF02635 DsrE/DsrF-like family JG479_RS08555 PF02635 DsrE/DsrF-like family JG479_RS08565 PF04358 DsrC like protein JG479_RS08570 PF00849 RNA pseudouridylate synthase JG479_RS08575 PF00293 NUDIX domain JG479_RS08585 PF04356 Protein of unknown function (DUF489) JG479_RS08590 PF00206 Lyase JG479_RS08590 PF08328 Adenylosuccinate lyase C-terminal JG479_RS08595 PF08007 Cupin superfamily protein JG479_RS08610 PF04389 Peptidase family M28 JG479_RS08635 PF00005 ABC transporter JG479_RS08635 PF00664 ABC transporter transmembrane region JG479_RS08645 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS08645 PF17158 Membrane-associated sensor, integral membrane domain JG479_RS08655 PF12392 Collagenase JG479_RS08655 PF01136 Peptidase family U32 JG479_RS08665 PF00155 Aminotransferase class I and II JG479_RS08670 PF01566 Natural resistance-associated macrophage protein JG479_RS08680 PF07995 Glucose / Sorbosone dehydrogenase JG479_RS08695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JG479_RS08695 PF02403 Seryl-tRNA synthetase N-terminal domain JG479_RS08700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JG479_RS08705 PF00004 ATPase family associated with various cellular activities (AAA) JG479_RS08705 PF16193 AAA C-terminal domain JG479_RS08705 PF12002 MgsA AAA+ ATPase C terminal JG479_RS08710 PF03548 Outer membrane lipoprotein carrier protein LolA JG479_RS08715 PF01580 FtsK/SpoIIIE family JG479_RS08715 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JG479_RS08715 PF09397 Ftsk gamma domain JG479_RS08715 PF17854 FtsK alpha domain JG479_RS08720 PF01037 Lrp/AsnC ligand binding domain JG479_RS08725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JG479_RS08725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JG479_RS08730 PF13091 PLD-like domain JG479_RS08735 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS08740 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JG479_RS08745 PF04377 Arginine-tRNA-protein transferase, C terminus JG479_RS08745 PF04376 Arginine-tRNA-protein transferase, N terminus JG479_RS08750 PF01176 Translation initiation factor 1A / IF-1 JG479_RS08755 PF07724 AAA domain (Cdc48 subfamily) JG479_RS08755 PF10431 C-terminal, D2-small domain, of ClpB protein JG479_RS08755 PF02861 Clp amino terminal domain, pathogenicity island component JG479_RS08755 PF00004 ATPase family associated with various cellular activities (AAA) JG479_RS08755 PF17871 AAA lid domain JG479_RS08760 PF02617 ATP-dependent Clp protease adaptor protein ClpS JG479_RS08765 PF00313 'Cold-shock' DNA-binding domain JG479_RS08770 PF03971 Monomeric isocitrate dehydrogenase JG479_RS08775 PF01979 Amidohydrolase family JG479_RS08780 PF01979 Amidohydrolase family JG479_RS08795 PF03881 Fructosamine kinase JG479_RS08805 PF00677 Lumazine binding domain JG479_RS08810 PF01554 MatE JG479_RS08835 PF02927 Cellulase N-terminal ig-like domain JG479_RS08835 PF00759 Glycosyl hydrolase family 9 JG479_RS08840 PF14310 Fibronectin type III-like domain JG479_RS08840 PF00933 Glycosyl hydrolase family 3 N terminal domain JG479_RS08840 PF01915 Glycosyl hydrolase family 3 C-terminal domain JG479_RS08850 PF04820 Tryptophan halogenase JG479_RS08860 PF07691 PA14 domain JG479_RS08860 PF01915 Glycosyl hydrolase family 3 C-terminal domain JG479_RS08860 PF00933 Glycosyl hydrolase family 3 N terminal domain JG479_RS08860 PF14310 Fibronectin type III-like domain JG479_RS08865 PF00083 Sugar (and other) transporter JG479_RS08870 PF00072 Response regulator receiver domain JG479_RS08870 PF00486 Transcriptional regulatory protein, C terminal JG479_RS08875 PF02702 Osmosensitive K+ channel His kinase sensor domain JG479_RS08875 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS08875 PF13492 GAF domain JG479_RS08875 PF13493 Domain of unknown function (DUF4118) JG479_RS08880 PF02254 TrkA-N domain JG479_RS08880 PF02080 TrkA-C domain JG479_RS08885 PF02386 Cation transport protein JG479_RS08890 PF00083 Sugar (and other) transporter JG479_RS08895 PF00356 Bacterial regulatory proteins, lacI family JG479_RS08900 PF04616 Glycosyl hydrolases family 43 JG479_RS08900 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JG479_RS08905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JG479_RS08910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JG479_RS08910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JG479_RS08920 PF00923 Transaldolase/Fructose-6-phosphate aldolase JG479_RS08925 PF00456 Transketolase, thiamine diphosphate binding domain JG479_RS08925 PF02780 Transketolase, C-terminal domain JG479_RS08925 PF02779 Transketolase, pyrimidine binding domain JG479_RS08935 PF01263 Aldose 1-epimerase JG479_RS08940 PF00331 Glycosyl hydrolase family 10 JG479_RS08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS08950 PF03466 LysR substrate binding domain JG479_RS08960 PF00753 Metallo-beta-lactamase superfamily JG479_RS08965 PF00553 Cellulose binding domain JG479_RS08965 PF02013 Cellulose or protein binding domain JG479_RS08965 PF00331 Glycosyl hydrolase family 10 JG479_RS08970 PF00331 Glycosyl hydrolase family 10 JG479_RS08980 PF01270 Glycosyl hydrolases family 8 JG479_RS08985 PF00356 Bacterial regulatory proteins, lacI family JG479_RS08990 PF00251 Glycosyl hydrolases family 32 N-terminal domain JG479_RS08990 PF08244 Glycosyl hydrolases family 32 C terminal JG479_RS08995 PF00083 Sugar (and other) transporter JG479_RS09010 PF04820 Tryptophan halogenase JG479_RS09025 PF07715 TonB-dependent Receptor Plug Domain JG479_RS09025 PF00593 TonB dependent receptor JG479_RS09030 PF04616 Glycosyl hydrolases family 43 JG479_RS09060 PF14245 Type IV pilin PilA JG479_RS09060 PF07963 Prokaryotic N-terminal methylation motif JG479_RS09065 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JG479_RS09065 PF07963 Prokaryotic N-terminal methylation motif JG479_RS09070 PF00916 Sulfate permease family JG479_RS09070 PF01740 STAS domain JG479_RS09075 PF00582 Universal stress protein family JG479_RS09080 PF03466 LysR substrate binding domain JG479_RS09080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS09095 PF00042 Globin JG479_RS09095 PF00970 Oxidoreductase FAD-binding domain JG479_RS09095 PF00175 Oxidoreductase NAD-binding domain JG479_RS09100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JG479_RS09100 PF04324 BFD-like [2Fe-2S] binding domain JG479_RS09100 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS09100 PF13806 Rieske-like [2Fe-2S] domain JG479_RS09100 PF18267 Rubredoxin NAD+ reductase C-terminal domain JG479_RS09100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JG479_RS09105 PF13806 Rieske-like [2Fe-2S] domain JG479_RS09110 PF10414 Sirohaem synthase dimerisation region JG479_RS09110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JG479_RS09110 PF14824 Sirohaem biosynthesis protein central JG479_RS09120 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS09120 PF00672 HAMP domain JG479_RS09125 PF00563 EAL domain JG479_RS09125 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS09125 PF03707 Bacterial signalling protein N terminal repeat JG479_RS09130 PF00196 Bacterial regulatory proteins, luxR family JG479_RS09130 PF00072 Response regulator receiver domain JG479_RS09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS09135 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS09135 PF00672 HAMP domain JG479_RS09135 PF13426 PAS domain JG479_RS09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS09145 PF03466 LysR substrate binding domain JG479_RS09150 PF03475 3-alpha domain JG479_RS09150 PF03473 MOSC domain JG479_RS09155 PF02391 MoaE protein JG479_RS09160 PF02597 ThiS family JG479_RS09165 PF01967 MoaC family JG479_RS09170 PF00994 Probable molybdopterin binding domain JG479_RS09175 PF12804 MobA-like NTP transferase domain JG479_RS09180 PF06463 Molybdenum Cofactor Synthesis C JG479_RS09180 PF04055 Radical SAM superfamily JG479_RS09185 PF00384 Molybdopterin oxidoreductase JG479_RS09185 PF04324 BFD-like [2Fe-2S] binding domain JG479_RS09185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JG479_RS09185 PF01568 Molydopterin dinucleotide binding domain JG479_RS09190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JG479_RS09190 PF04324 BFD-like [2Fe-2S] binding domain JG479_RS09190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS09190 PF18267 Rubredoxin NAD+ reductase C-terminal domain JG479_RS09190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JG479_RS09200 PF03793 PASTA domain JG479_RS09200 PF00069 Protein kinase domain JG479_RS09205 PF07690 Major Facilitator Superfamily JG479_RS09210 PF00899 ThiF family JG479_RS09215 PF03459 TOBE domain JG479_RS09215 PF00005 ABC transporter JG479_RS09220 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS09230 PF03454 MoeA C-terminal region (domain IV) JG479_RS09230 PF00994 Probable molybdopterin binding domain JG479_RS09230 PF03453 MoeA N-terminal region (domain I and II) JG479_RS09240 PF00209 Sodium:neurotransmitter symporter family JG479_RS09245 PF03795 YCII-related domain JG479_RS09255 PF00072 Response regulator receiver domain JG479_RS09255 PF00486 Transcriptional regulatory protein, C terminal JG479_RS09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS09275 PF01594 AI-2E family transporter JG479_RS09280 PF01370 NAD dependent epimerase/dehydratase family JG479_RS09280 PF08338 Domain of unknown function (DUF1731) JG479_RS09285 PF08448 PAS fold JG479_RS09285 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS09290 PF01915 Glycosyl hydrolase family 3 C-terminal domain JG479_RS09290 PF14310 Fibronectin type III-like domain JG479_RS09290 PF00933 Glycosyl hydrolase family 3 N terminal domain JG479_RS09295 PF07690 Major Facilitator Superfamily JG479_RS09300 PF00232 Glycosyl hydrolase family 1 JG479_RS09310 PF00356 Bacterial regulatory proteins, lacI family JG479_RS09325 PF01966 HD domain JG479_RS09325 PF13286 Phosphohydrolase-associated domain JG479_RS09330 PF00326 Prolyl oligopeptidase family JG479_RS09330 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JG479_RS09340 PF00593 TonB dependent receptor JG479_RS09340 PF07715 TonB-dependent Receptor Plug Domain JG479_RS09345 PF01063 Amino-transferase class IV JG479_RS09350 PF00487 Fatty acid desaturase JG479_RS09355 PF00970 Oxidoreductase FAD-binding domain JG479_RS09355 PF00175 Oxidoreductase NAD-binding domain JG479_RS09355 PF00111 2Fe-2S iron-sulfur cluster binding domain JG479_RS09360 PF07995 Glucose / Sorbosone dehydrogenase JG479_RS09385 PF09997 Predicted membrane protein (DUF2238) JG479_RS09390 PF00106 short chain dehydrogenase JG479_RS09420 PF04820 Tryptophan halogenase JG479_RS09425 PF04820 Tryptophan halogenase JG479_RS09430 PF00933 Glycosyl hydrolase family 3 N terminal domain JG479_RS09430 PF14310 Fibronectin type III-like domain JG479_RS09430 PF01915 Glycosyl hydrolase family 3 C-terminal domain JG479_RS09435 PF00232 Glycosyl hydrolase family 1 JG479_RS09445 PF00356 Bacterial regulatory proteins, lacI family JG479_RS09455 PF07690 Major Facilitator Superfamily JG479_RS09485 PF01266 FAD dependent oxidoreductase JG479_RS09490 PF18113 Rubredoxin binding C-terminal domain JG479_RS09490 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS09495 PF00171 Aldehyde dehydrogenase family JG479_RS09500 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JG479_RS09500 PF00355 Rieske [2Fe-2S] domain JG479_RS09505 PF02028 BCCT, betaine/carnitine/choline family transporter JG479_RS09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS09510 PF03466 LysR substrate binding domain JG479_RS09530 PF00999 Sodium/hydrogen exchanger family JG479_RS09540 PF12697 Alpha/beta hydrolase family JG479_RS09570 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system JG479_RS09590 PF00929 Exonuclease JG479_RS09590 PF08411 Exonuclease C-terminal JG479_RS09595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JG479_RS09595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JG479_RS09600 PF00255 Glutathione peroxidase JG479_RS09605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JG479_RS09605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JG479_RS09610 PF00209 Sodium:neurotransmitter symporter family JG479_RS09620 PF01842 ACT domain JG479_RS09620 PF00696 Amino acid kinase family JG479_RS09625 PF03600 Citrate transporter JG479_RS09650 PF01641 SelR domain JG479_RS09650 PF01625 Peptide methionine sulfoxide reductase JG479_RS09665 PF03692 Putative zinc- or iron-chelating domain JG479_RS09675 PF00873 AcrB/AcrD/AcrF family JG479_RS09685 PF01738 Dienelactone hydrolase family JG479_RS09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS09700 PF03466 LysR substrate binding domain JG479_RS09705 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS09705 PF00107 Zinc-binding dehydrogenase JG479_RS09710 PF00881 Nitroreductase family JG479_RS09715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JG479_RS09725 PF03449 Transcription elongation factor, N-terminal JG479_RS09725 PF01272 Transcription elongation factor, GreA/GreB, C-term JG479_RS09730 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JG479_RS09730 PF02142 MGS-like domain JG479_RS09730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JG479_RS09735 PF00117 Glutamine amidotransferase class-I JG479_RS09735 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JG479_RS09740 PF05173 Dihydrodipicolinate reductase, C-terminus JG479_RS09740 PF01113 Dihydrodipicolinate reductase, N-terminus JG479_RS09755 PF12697 Alpha/beta hydrolase family JG479_RS09765 PF07690 Major Facilitator Superfamily JG479_RS09770 PF01025 GrpE JG479_RS09775 PF01628 HrcA protein C terminal domain JG479_RS09775 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JG479_RS09780 PF01513 ATP-NAD kinase JG479_RS09790 PF02463 RecF/RecN/SMC N terminal domain JG479_RS09800 PF00072 Response regulator receiver domain JG479_RS09800 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS09810 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS09810 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JG479_RS09815 PF00310 Glutamine amidotransferases class-II JG479_RS09815 PF04898 Glutamate synthase central domain JG479_RS09815 PF01645 Conserved region in glutamate synthase JG479_RS09815 PF01493 GXGXG motif JG479_RS09825 PF00005 ABC transporter JG479_RS09830 PF12704 MacB-like periplasmic core domain JG479_RS09830 PF02687 FtsX-like permease family JG479_RS09830 PF00005 ABC transporter JG479_RS09835 PF02687 FtsX-like permease family JG479_RS09835 PF00005 ABC transporter JG479_RS09835 PF12704 MacB-like periplasmic core domain JG479_RS09840 PF00072 Response regulator receiver domain JG479_RS09840 PF00158 Sigma-54 interaction domain JG479_RS09840 PF02954 Bacterial regulatory protein, Fis family JG479_RS09845 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS09845 PF00672 HAMP domain JG479_RS09850 PF00462 Glutaredoxin JG479_RS09855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JG479_RS09855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JG479_RS09860 PF08298 PrkA AAA domain JG479_RS09860 PF06798 PrkA serine protein kinase C-terminal domain JG479_RS09865 PF04285 Protein of unknown function (DUF444) JG479_RS09870 PF04293 SpoVR like protein JG479_RS09875 PF05230 MASE2 domain JG479_RS09875 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS09880 PF00072 Response regulator receiver domain JG479_RS09880 PF01339 CheB methylesterase JG479_RS09885 PF08534 Redoxin JG479_RS09890 PF05191 Adenylate kinase, active site lid JG479_RS09895 PF00183 Hsp90 protein JG479_RS09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS09900 PF00849 RNA pseudouridylate synthase JG479_RS09905 PF07690 Major Facilitator Superfamily JG479_RS09910 PF02132 RecR protein JG479_RS09910 PF13662 Toprim domain JG479_RS09915 PF02575 YbaB/EbfC DNA-binding family JG479_RS09920 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JG479_RS09920 PF12169 DNA polymerase III subunits gamma and tau domain III JG479_RS09920 PF12170 DNA polymerase III tau subunit V interacting with alpha JG479_RS09925 PF00156 Phosphoribosyl transferase domain JG479_RS09930 PF09836 Putative DNA-binding domain JG479_RS09935 PF05114 Protein of unknown function (DUF692) JG479_RS09945 PF01207 Dihydrouridine synthase (Dus) JG479_RS09965 PF03544 Gram-negative bacterial TonB protein C-terminal JG479_RS09970 PF02472 Biopolymer transport protein ExbD/TolR JG479_RS09975 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS09980 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS09990 PF00313 'Cold-shock' DNA-binding domain JG479_RS09995 PF01979 Amidohydrolase family JG479_RS10000 PF00563 EAL domain JG479_RS10000 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS10000 PF03707 Bacterial signalling protein N terminal repeat JG479_RS10000 PF13188 PAS domain JG479_RS10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS10005 PF03466 LysR substrate binding domain JG479_RS10010 PF02698 DUF218 domain JG479_RS10015 PF01784 NIF3 (NGG1p interacting factor 3) JG479_RS10025 PF07969 Amidohydrolase family JG479_RS10030 PF06167 Glucose-regulated metallo-peptidase M90 JG479_RS10035 PF00302 Chloramphenicol acetyltransferase JG479_RS10040 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JG479_RS10040 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JG479_RS10050 PF04715 Anthranilate synthase component I, N terminal region JG479_RS10050 PF00425 chorismate binding enzyme JG479_RS10055 PF00293 NUDIX domain JG479_RS10060 PF03315 Serine dehydratase beta chain JG479_RS10060 PF03313 Serine dehydratase alpha chain JG479_RS10065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS10065 PF03466 LysR substrate binding domain JG479_RS10075 PF00860 Permease family JG479_RS10090 PF02810 SEC-C motif JG479_RS10095 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS10095 PF01590 GAF domain JG479_RS10095 PF00360 Phytochrome region JG479_RS10095 PF00563 EAL domain JG479_RS10125 PF00072 Response regulator receiver domain JG479_RS10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS10125 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS10125 PF01627 Hpt domain JG479_RS10130 PF00072 Response regulator receiver domain JG479_RS10140 PF01966 HD domain JG479_RS10145 PF10672 S-adenosylmethionine-dependent methyltransferase JG479_RS10145 PF17785 PUA-like domain JG479_RS10155 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS10155 PF00072 Response regulator receiver domain JG479_RS10160 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JG479_RS10160 PF00271 Helicase conserved C-terminal domain JG479_RS10160 PF00270 DEAD/DEAH box helicase JG479_RS10160 PF11898 Domain of unknown function (DUF3418) JG479_RS10160 PF04408 Helicase associated domain (HA2) JG479_RS10165 PF01112 Asparaginase JG479_RS10175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JG479_RS10180 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JG479_RS10180 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JG479_RS10185 PF00342 Phosphoglucose isomerase JG479_RS10190 PF00266 Aminotransferase class-V JG479_RS10195 PF01594 AI-2E family transporter JG479_RS10210 PF01435 Peptidase family M48 JG479_RS10215 PF03960 ArsC family JG479_RS10220 PF03358 NADPH-dependent FMN reductase JG479_RS10235 PF05494 MlaC protein JG479_RS10240 PF09411 Lipid A 3-O-deacylase (PagL) JG479_RS10250 PF07670 Nucleoside recognition JG479_RS10255 PF06804 NlpB/DapX lipoprotein JG479_RS10260 PF01842 ACT domain JG479_RS10265 PF00578 AhpC/TSA family JG479_RS10280 PF13649 Methyltransferase domain JG479_RS10285 PF04055 Radical SAM superfamily JG479_RS10290 PF06508 Queuosine biosynthesis protein QueC JG479_RS10315 PF10672 S-adenosylmethionine-dependent methyltransferase JG479_RS10315 PF17785 PUA-like domain JG479_RS10320 PF12344 Ultra-violet resistance protein B JG479_RS10320 PF00271 Helicase conserved C-terminal domain JG479_RS10320 PF04851 Type III restriction enzyme, res subunit JG479_RS10320 PF02151 UvrB/uvrC motif JG479_RS10320 PF17757 UvrB interaction domain JG479_RS10325 PF01554 MatE JG479_RS10350 PF00563 EAL domain JG479_RS10350 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS10350 PF17157 Gammaproteobacterial periplasmic sensor domain JG479_RS10360 PF02508 Rnf-Nqr subunit, membrane protein JG479_RS10365 PF04060 Putative Fe-S cluster JG479_RS10370 PF10531 SLBB domain JG479_RS10370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JG479_RS10370 PF12838 4Fe-4S dicluster domain JG479_RS10370 PF13375 RnfC Barrel sandwich hybrid domain JG479_RS10375 PF03116 NQR2, RnfD, RnfE family JG479_RS10380 PF04205 FMN-binding domain JG479_RS10385 PF02508 Rnf-Nqr subunit, membrane protein JG479_RS10390 PF00633 Helix-hairpin-helix motif JG479_RS10390 PF10576 Iron-sulfur binding domain of endonuclease III JG479_RS10390 PF00730 HhH-GPD superfamily base excision DNA repair protein JG479_RS10405 PF01276 Orn/Lys/Arg decarboxylase, major domain JG479_RS10405 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JG479_RS10425 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JG479_RS10430 PF01116 Fructose-bisphosphate aldolase class-II JG479_RS10435 PF01081 KDPG and KHG aldolase JG479_RS10440 PF00294 pfkB family carbohydrate kinase JG479_RS10445 PF07690 Major Facilitator Superfamily JG479_RS10450 PF07883 Cupin domain JG479_RS10455 PF07940 Heparinase II/III-like protein JG479_RS10455 PF05426 Alginate lyase JG479_RS10460 PF14592 Chondroitinase B JG479_RS10465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JG479_RS10465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JG479_RS10470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JG479_RS10475 PF01258 Prokaryotic dksA/traR C4-type zinc finger JG479_RS10480 PF05193 Peptidase M16 inactive domain JG479_RS10480 PF00675 Insulinase (Peptidase family M16) JG479_RS10560 PF00072 Response regulator receiver domain JG479_RS10565 PF01641 SelR domain JG479_RS10580 PF00533 BRCA1 C Terminus (BRCT) domain JG479_RS10580 PF01653 NAD-dependent DNA ligase adenylation domain JG479_RS10580 PF12826 Helix-hairpin-helix motif JG479_RS10580 PF03120 NAD-dependent DNA ligase OB-fold domain JG479_RS10580 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JG479_RS10585 PF04354 ZipA, C-terminal FtsZ-binding domain JG479_RS10590 PF06470 SMC proteins Flexible Hinge Domain JG479_RS10590 PF02463 RecF/RecN/SMC N terminal domain JG479_RS10595 PF08032 RNA 2'-O ribose methyltransferase substrate binding JG479_RS10595 PF00588 SpoU rRNA Methylase family JG479_RS10600 PF04632 Fusaric acid resistance protein family JG479_RS10605 PF00529 HlyD membrane-fusion protein of T1SS JG479_RS10605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JG479_RS10615 PF05987 Bacterial protein of unknown function (DUF898) JG479_RS10630 PF00491 Arginase family JG479_RS10635 PF17944 Arginine decarboxylase C-terminal helical extension JG479_RS10635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JG479_RS10635 PF17810 Arginine decarboxylase helical bundle domain JG479_RS10645 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JG479_RS10660 PF03707 Bacterial signalling protein N terminal repeat JG479_RS10660 PF00563 EAL domain JG479_RS10660 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS10680 PF18125 RlmM ferredoxin-like domain JG479_RS10680 PF01728 FtsJ-like methyltransferase JG479_RS10685 PF04241 Protein of unknown function (DUF423) JG479_RS10695 PF03466 LysR substrate binding domain JG479_RS10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS10700 PF00793 DAHP synthetase I family JG479_RS10705 PF05684 Protein of unknown function (DUF819) JG479_RS10710 PF13369 Transglutaminase-like superfamily JG479_RS10720 PF11849 Domain of unknown function (DUF3369) JG479_RS10725 PF17827 PrmC N-terminal domain JG479_RS10725 PF13847 Methyltransferase domain JG479_RS10730 PF03462 PCRF domain JG479_RS10730 PF00472 RF-1 domain JG479_RS10735 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JG479_RS10735 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JG479_RS10735 PF01488 Shikimate / quinate 5-dehydrogenase JG479_RS10740 PF03550 Outer membrane lipoprotein LolB JG479_RS10745 PF00288 GHMP kinases N terminal domain JG479_RS10745 PF08544 GHMP kinases C terminal JG479_RS10750 PF14572 Phosphoribosyl synthetase-associated domain JG479_RS10750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JG479_RS10755 PF14693 Ribosomal protein TL5, C-terminal domain JG479_RS10755 PF01386 Ribosomal L25p family JG479_RS10760 PF01195 Peptidyl-tRNA hydrolase JG479_RS10765 PF06071 Protein of unknown function (DUF933) JG479_RS10765 PF01926 50S ribosome-binding GTPase JG479_RS10820 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS10820 PF03707 Bacterial signalling protein N terminal repeat JG479_RS10820 PF00563 EAL domain JG479_RS10825 PF01494 FAD binding domain JG479_RS10830 PF00919 Uncharacterized protein family UPF0004 JG479_RS10830 PF01938 TRAM domain JG479_RS10830 PF04055 Radical SAM superfamily JG479_RS10835 PF02562 PhoH-like protein JG479_RS10840 PF02130 Uncharacterized protein family UPF0054 JG479_RS10845 PF03471 Transporter associated domain JG479_RS10845 PF00571 CBS domain JG479_RS10850 PF00795 Carbon-nitrogen hydrolase JG479_RS10875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JG479_RS10900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JG479_RS10900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JG479_RS10905 PF13654 AAA domain JG479_RS10905 PF05362 Lon protease (S16) C-terminal proteolytic domain JG479_RS10910 PF07295 Zinc-ribbon containing domain JG479_RS10915 PF13603 Leucyl-tRNA synthetase, Domain 2 JG479_RS10915 PF08264 Anticodon-binding domain of tRNA JG479_RS10915 PF00133 tRNA synthetases class I (I, L, M and V) JG479_RS10920 PF04390 Lipopolysaccharide-assembly JG479_RS10930 PF01467 Cytidylyltransferase-like JG479_RS10940 PF02590 Predicted SPOUT methyltransferase JG479_RS10945 PF00905 Penicillin binding protein transpeptidase domain JG479_RS10945 PF03717 Penicillin-binding Protein dimerisation domain JG479_RS10950 PF01098 Cell cycle protein JG479_RS10955 PF05036 Sporulation related domain JG479_RS10955 PF03330 Lytic transglycolase JG479_RS10960 PF07943 Penicillin-binding protein 5, C-terminal domain JG479_RS10960 PF00768 D-alanyl-D-alanine carboxypeptidase JG479_RS10965 PF04359 Protein of unknown function (DUF493) JG479_RS10970 PF03099 Biotin/lipoate A/B protein ligase family JG479_RS10975 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JG479_RS10975 PF04055 Radical SAM superfamily JG479_RS10985 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JG479_RS10995 PF04151 Bacterial pre-peptidase C-terminal domain JG479_RS10995 PF04389 Peptidase family M28 JG479_RS11030 PF00403 Heavy-metal-associated domain JG479_RS11035 PF13411 MerR HTH family regulatory protein JG479_RS11045 PF03334 Na+/H+ antiporter subunit JG479_RS11050 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JG479_RS11055 PF01899 Na+/H+ ion antiporter subunit JG479_RS11060 PF00361 Proton-conducting membrane transporter JG479_RS11065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JG479_RS11070 PF13244 Domain of unknown function (DUF4040) JG479_RS11070 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JG479_RS11070 PF00361 Proton-conducting membrane transporter JG479_RS11070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JG479_RS11080 PF07719 Tetratricopeptide repeat JG479_RS11080 PF13181 Tetratricopeptide repeat JG479_RS11085 PF01138 3' exoribonuclease family, domain 1 JG479_RS11085 PF00013 KH domain JG479_RS11085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JG479_RS11085 PF00575 S1 RNA binding domain JG479_RS11085 PF03725 3' exoribonuclease family, domain 2 JG479_RS11090 PF00312 Ribosomal protein S15 JG479_RS11095 PF09157 Pseudouridine synthase II TruB, C-terminal JG479_RS11095 PF01509 TruB family pseudouridylate synthase (N terminal domain) JG479_RS11095 PF16198 tRNA pseudouridylate synthase B C-terminal domain JG479_RS11100 PF02033 Ribosome-binding factor A JG479_RS11105 PF04760 Translation initiation factor IF-2, N-terminal region JG479_RS11105 PF00009 Elongation factor Tu GTP binding domain JG479_RS11105 PF11987 Translation-initiation factor 2 JG479_RS11105 PF08364 Bacterial translation initiation factor IF-2 associated region JG479_RS11110 PF13184 NusA-like KH domain JG479_RS11110 PF00575 S1 RNA binding domain JG479_RS11110 PF08529 NusA N-terminal domain JG479_RS11115 PF02576 RimP N-terminal domain JG479_RS11115 PF17384 RimP C-terminal SH3 domain JG479_RS11130 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JG479_RS11135 PF00011 Hsp20/alpha crystallin family JG479_RS11140 PF00578 AhpC/TSA family JG479_RS11145 PF02954 Bacterial regulatory protein, Fis family JG479_RS11145 PF00158 Sigma-54 interaction domain JG479_RS11145 PF00072 Response regulator receiver domain JG479_RS11155 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS11155 PF00563 EAL domain JG479_RS11155 PF00360 Phytochrome region JG479_RS11155 PF01590 GAF domain JG479_RS11165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS11165 PF00672 HAMP domain JG479_RS11165 PF00072 Response regulator receiver domain JG479_RS11165 PF01627 Hpt domain JG479_RS11165 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS11170 PF00857 Isochorismatase family JG479_RS11175 PF04397 LytTr DNA-binding domain JG479_RS11175 PF00072 Response regulator receiver domain JG479_RS11180 PF00462 Glutaredoxin JG479_RS11185 PF12343 Cold shock protein DEAD box A JG479_RS11185 PF03880 DbpA RNA binding domain JG479_RS11185 PF00271 Helicase conserved C-terminal domain JG479_RS11185 PF00270 DEAD/DEAH box helicase JG479_RS11195 PF03806 AbgT putative transporter family JG479_RS11200 PF08891 YfcL protein JG479_RS11210 PF04315 Elongation factor P hydroxylase JG479_RS11230 PF01264 Chorismate synthase JG479_RS11235 PF05175 Methyltransferase small domain JG479_RS11240 PF01713 Smr domain JG479_RS11255 PF01042 Endoribonuclease L-PSP JG479_RS11260 PF00300 Histidine phosphatase superfamily (branch 1) JG479_RS11265 PF00675 Insulinase (Peptidase family M16) JG479_RS11265 PF05193 Peptidase M16 inactive domain JG479_RS11270 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS11270 PF00563 EAL domain JG479_RS11270 PF03707 Bacterial signalling protein N terminal repeat JG479_RS11275 PF09285 Elongation factor P, C-terminal JG479_RS11275 PF08207 Elongation factor P (EF-P) KOW-like domain JG479_RS11275 PF01132 Elongation factor P (EF-P) OB domain JG479_RS11280 PF04237 YjbR JG479_RS11290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JG479_RS11290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JG479_RS11290 PF00378 Enoyl-CoA hydratase/isomerase JG479_RS11295 PF00108 Thiolase, N-terminal domain JG479_RS11295 PF02803 Thiolase, C-terminal domain JG479_RS11300 PF17863 AAA lid domain JG479_RS11300 PF07726 ATPase family associated with various cellular activities (AAA) JG479_RS11305 PF01882 Protein of unknown function DUF58 JG479_RS11315 PF13519 von Willebrand factor type A domain JG479_RS11315 PF07584 Aerotolerance regulator N-terminal JG479_RS11330 PF08281 Sigma-70, region 4 JG479_RS11330 PF04542 Sigma-70 region 2 JG479_RS11360 PF00109 Beta-ketoacyl synthase, N-terminal domain JG479_RS11360 PF02801 Beta-ketoacyl synthase, C-terminal domain JG479_RS11365 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JG479_RS11365 PF01266 FAD dependent oxidoreductase JG479_RS11375 PF13460 NAD(P)H-binding JG479_RS11410 PF00929 Exonuclease JG479_RS11415 PF18393 MotY N-terminal domain JG479_RS11415 PF00691 OmpA family JG479_RS11425 PF03222 Tryptophan/tyrosine permease family JG479_RS11430 PF00155 Aminotransferase class I and II JG479_RS11440 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS11440 PF00072 Response regulator receiver domain JG479_RS11450 PF01253 Translation initiation factor SUI1 JG479_RS11455 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS11455 PF03707 Bacterial signalling protein N terminal repeat JG479_RS11455 PF00563 EAL domain JG479_RS11460 PF01817 Chorismate mutase type II JG479_RS11460 PF00800 Prephenate dehydratase JG479_RS11465 PF02153 Prephenate dehydrogenase JG479_RS11465 PF01817 Chorismate mutase type II JG479_RS11470 PF01245 Ribosomal protein L19 JG479_RS11475 PF01746 tRNA (Guanine-1)-methyltransferase JG479_RS11480 PF05239 PRC-barrel domain JG479_RS11480 PF01782 RimM N-terminal domain JG479_RS11485 PF00886 Ribosomal protein S16 JG479_RS11490 PF02881 SRP54-type protein, helical bundle domain JG479_RS11490 PF02978 Signal peptide binding domain JG479_RS11490 PF00448 SRP54-type protein, GTPase domain JG479_RS11495 PF01578 Cytochrome C assembly protein JG479_RS11500 PF01595 Cyclin M transmembrane N-terminal domain JG479_RS11500 PF03471 Transporter associated domain JG479_RS11500 PF00571 CBS domain JG479_RS11510 PF04262 Glutamate-cysteine ligase JG479_RS11515 PF08447 PAS fold JG479_RS11515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS11520 PF02861 Clp amino terminal domain, pathogenicity island component JG479_RS11520 PF10431 C-terminal, D2-small domain, of ClpB protein JG479_RS11520 PF17871 AAA lid domain JG479_RS11520 PF07724 AAA domain (Cdc48 subfamily) JG479_RS11520 PF00004 ATPase family associated with various cellular activities (AAA) JG479_RS11525 PF02578 Multi-copper polyphenol oxidoreductase laccase JG479_RS11530 PF00849 RNA pseudouridylate synthase JG479_RS11530 PF01479 S4 domain JG479_RS11535 PF13525 Outer membrane lipoprotein JG479_RS11540 PF00543 Nitrogen regulatory protein P-II JG479_RS11545 PF07963 Prokaryotic N-terminal methylation motif JG479_RS11545 PF00114 Pilin (bacterial filament) JG479_RS11555 PF07963 Prokaryotic N-terminal methylation motif JG479_RS11555 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JG479_RS11580 PF00072 Response regulator receiver domain JG479_RS11580 PF04397 LytTr DNA-binding domain JG479_RS11585 PF06580 Histidine kinase JG479_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS11585 PF07694 5TMR of 5TMR-LYT JG479_RS11590 PF02401 LytB protein JG479_RS11595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JG479_RS11600 PF01252 Signal peptidase (SPase) II JG479_RS11605 PF08264 Anticodon-binding domain of tRNA JG479_RS11605 PF06827 Zinc finger found in FPG and IleRS JG479_RS11605 PF00133 tRNA synthetases class I (I, L, M and V) JG479_RS11610 PF01687 Riboflavin kinase JG479_RS11610 PF06574 FAD synthetase JG479_RS11615 PF03023 Lipid II flippase MurJ JG479_RS11620 PF01649 Ribosomal protein S20 JG479_RS11625 PF00072 Response regulator receiver domain JG479_RS11645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JG479_RS11655 PF03922 OmpW family JG479_RS11670 PF18024 Helix-turn-helix domain JG479_RS11670 PF00158 Sigma-54 interaction domain JG479_RS11675 PF11658 Cellulose biosynthesis protein BcsG JG479_RS11680 PF10995 Cellulose biosynthesis GIL JG479_RS11695 PF00535 Glycosyl transferase family 2 JG479_RS11695 PF07238 PilZ domain JG479_RS11695 PF03552 Cellulose synthase JG479_RS11700 PF03170 Bacterial cellulose synthase subunit JG479_RS11705 PF01270 Glycosyl hydrolases family 8 JG479_RS11710 PF13181 Tetratricopeptide repeat JG479_RS11710 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JG479_RS11715 PF00854 POT family JG479_RS11725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JG479_RS11730 PF01557 Fumarylacetoacetate (FAA) hydrolase family JG479_RS11735 PF01551 Peptidase family M23 JG479_RS11750 PF07690 Major Facilitator Superfamily JG479_RS11760 PF02142 MGS-like domain JG479_RS11765 PF00012 Hsp70 protein JG479_RS11775 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS11785 PF00593 TonB dependent receptor JG479_RS11785 PF07715 TonB-dependent Receptor Plug Domain JG479_RS11790 PF12795 Mechanosensitive ion channel porin domain JG479_RS11790 PF12794 Mechanosensitive ion channel inner membrane domain 1 JG479_RS11790 PF00924 Mechanosensitive ion channel JG479_RS11800 PF01432 Peptidase family M3 JG479_RS11805 PF00892 EamA-like transporter family JG479_RS11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS11820 PF03466 LysR substrate binding domain JG479_RS11835 PF02798 Glutathione S-transferase, N-terminal domain JG479_RS11840 PF03707 Bacterial signalling protein N terminal repeat JG479_RS11840 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS11840 PF00563 EAL domain JG479_RS11865 PF00486 Transcriptional regulatory protein, C terminal JG479_RS11865 PF00072 Response regulator receiver domain JG479_RS11870 PF00672 HAMP domain JG479_RS11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS11870 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS11890 PF01613 Flavin reductase like domain JG479_RS11895 PF00875 DNA photolyase JG479_RS11895 PF03441 FAD binding domain of DNA photolyase JG479_RS11905 PF02566 OsmC-like protein JG479_RS11935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS11935 PF13426 PAS domain JG479_RS11935 PF08447 PAS fold JG479_RS11940 PF07690 Major Facilitator Superfamily JG479_RS11945 PF00107 Zinc-binding dehydrogenase JG479_RS11945 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS11970 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS11985 PF08482 ATP-dependent helicase C-terminal JG479_RS11985 PF00271 Helicase conserved C-terminal domain JG479_RS11985 PF04408 Helicase associated domain (HA2) JG479_RS11985 PF00270 DEAD/DEAH box helicase JG479_RS11990 PF05532 CsbD-like JG479_RS11995 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JG479_RS12000 PF00111 2Fe-2S iron-sulfur cluster binding domain JG479_RS12000 PF01799 [2Fe-2S] binding domain JG479_RS12015 PF02574 Homocysteine S-methyltransferase JG479_RS12015 PF02965 Vitamin B12 dependent methionine synthase, activation domain JG479_RS12015 PF02607 B12 binding domain JG479_RS12015 PF02310 B12 binding domain JG479_RS12015 PF00809 Pterin binding enzyme JG479_RS12020 PF00809 Pterin binding enzyme JG479_RS12020 PF02607 B12 binding domain JG479_RS12020 PF02574 Homocysteine S-methyltransferase JG479_RS12020 PF02965 Vitamin B12 dependent methionine synthase, activation domain JG479_RS12020 PF02310 B12 binding domain JG479_RS12025 PF04204 Homoserine O-succinyltransferase JG479_RS12030 PF00005 ABC transporter JG479_RS12030 PF12848 ABC transporter JG479_RS12035 PF07238 PilZ domain JG479_RS12040 PF00850 Histone deacetylase domain JG479_RS12055 PF00392 Bacterial regulatory proteins, gntR family JG479_RS12055 PF00155 Aminotransferase class I and II JG479_RS12070 PF01040 UbiA prenyltransferase family JG479_RS12075 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JG479_RS12080 PF00510 Cytochrome c oxidase subunit III JG479_RS12085 PF00115 Cytochrome C and Quinol oxidase polypeptide I JG479_RS12090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JG479_RS12090 PF06481 COX Aromatic Rich Motif JG479_RS12100 PF04400 (Na+)-NQR maturation NqrM JG479_RS12105 PF02424 ApbE family JG479_RS12110 PF00175 Oxidoreductase NAD-binding domain JG479_RS12110 PF00111 2Fe-2S iron-sulfur cluster binding domain JG479_RS12110 PF00970 Oxidoreductase FAD-binding domain JG479_RS12115 PF02508 Rnf-Nqr subunit, membrane protein JG479_RS12120 PF02508 Rnf-Nqr subunit, membrane protein JG479_RS12125 PF04205 FMN-binding domain JG479_RS12130 PF03116 NQR2, RnfD, RnfE family JG479_RS12135 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JG479_RS12135 PF11973 NQRA C-terminal domain JG479_RS12140 PF12241 Trans-2-enoyl-CoA reductase catalytic region JG479_RS12140 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JG479_RS12140 PF07055 Enoyl reductase FAD binding domain JG479_RS12145 PF01722 BolA-like protein JG479_RS12155 PF05175 Methyltransferase small domain JG479_RS12165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JG479_RS12170 PF07690 Major Facilitator Superfamily JG479_RS12185 PF01521 Iron-sulphur cluster biosynthesis JG479_RS12190 PF00654 Voltage gated chloride channel JG479_RS12195 PF03653 Uncharacterised protein family (UPF0093) JG479_RS12200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JG479_RS12200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JG479_RS12205 PF00202 Aminotransferase class-III JG479_RS12210 PF00672 HAMP domain JG479_RS12210 PF12729 Four helix bundle sensory module for signal transduction JG479_RS12210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS12215 PF00912 Transglycosylase JG479_RS12215 PF00905 Penicillin binding protein transpeptidase domain JG479_RS12215 PF14814 Bifunctional transglycosylase second domain JG479_RS12220 PF00909 Ammonium Transporter Family JG479_RS12225 PF00543 Nitrogen regulatory protein P-II JG479_RS12230 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS12230 PF17158 Membrane-associated sensor, integral membrane domain JG479_RS12240 PF00497 Bacterial extracellular solute-binding proteins, family 3 JG479_RS12240 PF00072 Response regulator receiver domain JG479_RS12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS12240 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS12240 PF01627 Hpt domain JG479_RS12255 PF01928 CYTH domain JG479_RS12270 PF03448 MgtE intracellular N domain JG479_RS12270 PF01769 Divalent cation transporter JG479_RS12270 PF00571 CBS domain JG479_RS12280 PF01047 MarR family JG479_RS12285 PF17200 Single Cache domain 2 JG479_RS12285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS12285 PF00672 HAMP domain JG479_RS12315 PF13439 Glycosyltransferase Family 4 JG479_RS12330 PF01471 Putative peptidoglycan binding domain JG479_RS12330 PF03734 L,D-transpeptidase catalytic domain JG479_RS12345 PF01842 ACT domain JG479_RS12345 PF00551 Formyl transferase JG479_RS12350 PF00196 Bacterial regulatory proteins, luxR family JG479_RS12350 PF00072 Response regulator receiver domain JG479_RS12355 PF00501 AMP-binding enzyme JG479_RS12355 PF13193 AMP-binding enzyme C-terminal domain JG479_RS12355 PF16177 Acetyl-coenzyme A synthetase N-terminus JG479_RS12365 PF00593 TonB dependent receptor JG479_RS12365 PF07715 TonB-dependent Receptor Plug Domain JG479_RS12370 PF00154 recA bacterial DNA recombination protein JG479_RS12375 PF02464 Competence-damaged protein JG479_RS12380 PF05192 MutS domain III JG479_RS12380 PF01624 MutS domain I JG479_RS12380 PF05190 MutS family domain IV JG479_RS12380 PF05188 MutS domain II JG479_RS12380 PF00488 MutS domain V JG479_RS12385 PF04545 Sigma-70, region 4 JG479_RS12385 PF04539 Sigma-70 region 3 JG479_RS12385 PF00140 Sigma-70 factor, region 1.2 JG479_RS12385 PF04542 Sigma-70 region 2 JG479_RS12390 PF01551 Peptidase family M23 JG479_RS12390 PF01476 LysM domain JG479_RS12395 PF09335 SNARE associated Golgi protein JG479_RS12405 PF01975 Survival protein SurE JG479_RS12410 PF01142 tRNA pseudouridine synthase D (TruD) JG479_RS12415 PF02542 YgbB family JG479_RS12420 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JG479_RS12425 PF04977 Septum formation initiator JG479_RS12445 PF00158 Sigma-54 interaction domain JG479_RS12445 PF18024 Helix-turn-helix domain JG479_RS12480 PF00583 Acetyltransferase (GNAT) family JG479_RS12490 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JG479_RS12495 PF06865 Pyrimidine/purine nucleoside phosphorylase JG479_RS12500 PF00456 Transketolase, thiamine diphosphate binding domain JG479_RS12500 PF02780 Transketolase, C-terminal domain JG479_RS12500 PF02779 Transketolase, pyrimidine binding domain JG479_RS12505 PF00438 S-adenosylmethionine synthetase, N-terminal domain JG479_RS12505 PF02772 S-adenosylmethionine synthetase, central domain JG479_RS12505 PF02773 S-adenosylmethionine synthetase, C-terminal domain JG479_RS12515 PF01812 5-formyltetrahydrofolate cyclo-ligase family JG479_RS12520 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JG479_RS12525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JG479_RS12525 PF01842 ACT domain JG479_RS12525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JG479_RS12530 PF00282 Pyridoxal-dependent decarboxylase conserved domain JG479_RS12535 PF08495 FIST N domain JG479_RS12535 PF10442 FIST C domain JG479_RS12535 PF00563 EAL domain JG479_RS12535 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS12540 PF02390 Putative methyltransferase JG479_RS12545 PF01061 ABC-2 type transporter JG479_RS12550 PF00005 ABC transporter JG479_RS12555 PF02441 Flavoprotein JG479_RS12560 PF01225 Mur ligase family, catalytic domain JG479_RS12560 PF02875 Mur ligase family, glutamate ligase domain JG479_RS12560 PF08245 Mur ligase middle domain JG479_RS12570 PF02673 Bacitracin resistance protein BacA JG479_RS12575 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JG479_RS12585 PF02660 Glycerol-3-phosphate acyltransferase JG479_RS12590 PF00814 Glycoprotease family JG479_RS12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS12610 PF03466 LysR substrate binding domain JG479_RS12620 PF01040 UbiA prenyltransferase family JG479_RS12625 PF04345 Chorismate lyase JG479_RS12630 PF03748 Flagellar basal body-associated protein FliL JG479_RS12635 PF01694 Rhomboid family JG479_RS12635 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JG479_RS12640 PF00581 Rhodanese-like domain JG479_RS12645 PF00107 Zinc-binding dehydrogenase JG479_RS12645 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS12650 PF00155 Aminotransferase class I and II JG479_RS12660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JG479_RS12670 PF00534 Glycosyl transferases group 1 JG479_RS12685 PF01467 Cytidylyltransferase-like JG479_RS12685 PF00294 pfkB family carbohydrate kinase JG479_RS12690 PF13580 SIS domain JG479_RS12695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JG479_RS12705 PF07027 Protein of unknown function (DUF1318) JG479_RS12710 PF13617 YnbE-like lipoprotein JG479_RS12720 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JG479_RS12720 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JG479_RS12720 PF02769 AIR synthase related protein, C-terminal domain JG479_RS12725 PF00497 Bacterial extracellular solute-binding proteins, family 3 JG479_RS12725 PF01464 Transglycosylase SLT domain JG479_RS12735 PF14437 MafB19-like deaminase JG479_RS12740 PF00294 pfkB family carbohydrate kinase JG479_RS12745 PF04960 Glutaminase JG479_RS12770 PF00085 Thioredoxin JG479_RS12775 PF07687 Peptidase dimerisation domain JG479_RS12775 PF01546 Peptidase family M20/M25/M40 JG479_RS12780 PF01131 DNA topoisomerase JG479_RS12780 PF01751 Toprim domain JG479_RS12790 PF13677 Membrane MotB of proton-channel complex MotA/MotB JG479_RS12790 PF00691 OmpA family JG479_RS12795 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS12800 PF02609 Exonuclease VII small subunit JG479_RS12805 PF00348 Polyprenyl synthetase JG479_RS12810 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JG479_RS12810 PF02779 Transketolase, pyrimidine binding domain JG479_RS12810 PF02780 Transketolase, C-terminal domain JG479_RS12815 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS12820 PF04608 Phosphatidylglycerophosphatase A JG479_RS12825 PF00586 AIR synthase related protein, N-terminal domain JG479_RS12825 PF02769 AIR synthase related protein, C-terminal domain JG479_RS12830 PF01029 NusB family JG479_RS12835 PF00885 6,7-dimethyl-8-ribityllumazine synthase JG479_RS12840 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JG479_RS12840 PF00925 GTP cyclohydrolase II JG479_RS12845 PF00677 Lumazine binding domain JG479_RS12850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JG479_RS12850 PF01872 RibD C-terminal domain JG479_RS12855 PF03477 ATP cone domain JG479_RS12860 PF00464 Serine hydroxymethyltransferase JG479_RS12865 PF00291 Pyridoxal-phosphate dependent enzyme JG479_RS12865 PF14821 Threonine synthase N terminus JG479_RS12870 PF00288 GHMP kinases N terminal domain JG479_RS12870 PF08544 GHMP kinases C terminal JG479_RS12875 PF13840 ACT domain JG479_RS12875 PF01842 ACT domain JG479_RS12875 PF00696 Amino acid kinase family JG479_RS12875 PF03447 Homoserine dehydrogenase, NAD binding domain JG479_RS12875 PF00742 Homoserine dehydrogenase JG479_RS12880 PF00072 Response regulator receiver domain JG479_RS12885 PF00497 Bacterial extracellular solute-binding proteins, family 3 JG479_RS12885 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS12890 PF04381 Putative exonuclease, RdgC JG479_RS12910 PF12404 Peptidase JG479_RS12910 PF00883 Cytosol aminopeptidase family, catalytic domain JG479_RS12915 PF03749 Sugar fermentation stimulation protein RE domain JG479_RS12915 PF17746 SfsA N-terminal OB domain JG479_RS12920 PF01258 Prokaryotic dksA/traR C4-type zinc finger JG479_RS12925 PF00749 tRNA synthetases class I (E and Q), catalytic domain JG479_RS12930 PF12627 Probable RNA and SrmB- binding site of polymerase A JG479_RS12930 PF12626 Polymerase A arginine-rich C-terminus JG479_RS12930 PF01743 Poly A polymerase head domain JG479_RS12935 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JG479_RS12940 PF02548 Ketopantoate hydroxymethyltransferase JG479_RS12945 PF02569 Pantoate-beta-alanine ligase JG479_RS12955 PF12849 PBP superfamily domain JG479_RS12960 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS12960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS12960 PF00989 PAS fold JG479_RS12960 PF11808 Phosphate regulon sensor protein PhoR JG479_RS12965 PF00486 Transcriptional regulatory protein, C terminal JG479_RS12965 PF00072 Response regulator receiver domain JG479_RS12970 PF01116 Fructose-bisphosphate aldolase class-II JG479_RS12975 PF00162 Phosphoglycerate kinase JG479_RS12980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JG479_RS12980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JG479_RS12985 PF00578 AhpC/TSA family JG479_RS13000 PF00571 CBS domain JG479_RS13000 PF00478 IMP dehydrogenase / GMP reductase domain JG479_RS13005 PF00474 Sodium:solute symporter family JG479_RS13015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS13015 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS13015 PF00072 Response regulator receiver domain JG479_RS13015 PF09456 RcsC Alpha-Beta-Loop (ABL) JG479_RS13030 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS13030 PF17158 Membrane-associated sensor, integral membrane domain JG479_RS13035 PF09335 SNARE associated Golgi protein JG479_RS13045 PF00873 AcrB/AcrD/AcrF family JG479_RS13070 PF02929 Beta galactosidase small chain JG479_RS13070 PF16353 Domain of unknown function(DUF4981) JG479_RS13070 PF00703 Glycosyl hydrolases family 2 JG479_RS13070 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JG479_RS13070 PF02837 Glycosyl hydrolases family 2, sugar binding domain JG479_RS13075 PF07681 DoxX JG479_RS13080 PF00465 Iron-containing alcohol dehydrogenase JG479_RS13085 PF06719 AraC-type transcriptional regulator N-terminus JG479_RS13085 PF12833 Helix-turn-helix domain JG479_RS13125 PF00293 NUDIX domain JG479_RS13130 PF16177 Acetyl-coenzyme A synthetase N-terminus JG479_RS13130 PF00501 AMP-binding enzyme JG479_RS13130 PF13193 AMP-binding enzyme C-terminal domain JG479_RS13140 PF02018 Carbohydrate binding domain JG479_RS13140 PF00331 Glycosyl hydrolase family 10 JG479_RS13140 PF00404 Dockerin type I domain JG479_RS13140 PF00756 Putative esterase JG479_RS13145 PF00672 HAMP domain JG479_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS13145 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS13150 PF00486 Transcriptional regulatory protein, C terminal JG479_RS13150 PF00072 Response regulator receiver domain JG479_RS13155 PF00873 AcrB/AcrD/AcrF family JG479_RS13160 PF13533 Biotin-lipoyl like JG479_RS13165 PF02321 Outer membrane efflux protein JG479_RS13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS13170 PF03466 LysR substrate binding domain JG479_RS13175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JG479_RS13190 PF03739 Lipopolysaccharide export system permease LptF/LptG JG479_RS13195 PF03739 Lipopolysaccharide export system permease LptF/LptG JG479_RS13200 PF00883 Cytosol aminopeptidase family, catalytic domain JG479_RS13200 PF02789 Cytosol aminopeptidase family, N-terminal domain JG479_RS13205 PF04364 DNA polymerase III chi subunit, HolC JG479_RS13210 PF08264 Anticodon-binding domain of tRNA JG479_RS13210 PF00133 tRNA synthetases class I (I, L, M and V) JG479_RS13210 PF10458 Valyl tRNA synthetase tRNA binding arm JG479_RS13215 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JG479_RS13220 PF01966 HD domain JG479_RS13250 PF01636 Phosphotransferase enzyme family JG479_RS13270 PF01168 Alanine racemase, N-terminal domain JG479_RS13270 PF00842 Alanine racemase, C-terminal domain JG479_RS13275 PF03796 DnaB-like helicase C terminal domain JG479_RS13275 PF00772 DnaB-like helicase N terminal domain JG479_RS13290 PF08281 Sigma-70, region 4 JG479_RS13290 PF04542 Sigma-70 region 2 JG479_RS13295 PF03948 Ribosomal protein L9, C-terminal domain JG479_RS13295 PF01281 Ribosomal protein L9, N-terminal domain JG479_RS13300 PF01084 Ribosomal protein S18 JG479_RS13305 PF00436 Single-strand binding protein family JG479_RS13310 PF01250 Ribosomal protein S6 JG479_RS13325 PF00326 Prolyl oligopeptidase family JG479_RS13330 PF01494 FAD binding domain JG479_RS13335 PF01494 FAD binding domain JG479_RS13340 PF00557 Metallopeptidase family M24 JG479_RS13340 PF05195 Aminopeptidase P, N-terminal domain JG479_RS13345 PF03695 Uncharacterised protein family (UPF0149) JG479_RS13355 PF00873 AcrB/AcrD/AcrF family JG479_RS13360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JG479_RS13365 PF02321 Outer membrane efflux protein JG479_RS13400 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS13400 PF00072 Response regulator receiver domain JG479_RS13400 PF01627 Hpt domain JG479_RS13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS13400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS13400 PF00672 HAMP domain JG479_RS13405 PF04362 Bacterial Fe(2+) trafficking JG479_RS13410 PF10576 Iron-sulfur binding domain of endonuclease III JG479_RS13410 PF14815 NUDIX domain JG479_RS13410 PF00730 HhH-GPD superfamily base excision DNA repair protein JG479_RS13410 PF00633 Helix-hairpin-helix motif JG479_RS13415 PF02390 Putative methyltransferase JG479_RS13420 PF08468 Methyltransferase small domain N-terminal JG479_RS13420 PF05175 Methyltransferase small domain JG479_RS13425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS13425 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS13425 PF00497 Bacterial extracellular solute-binding proteins, family 3 JG479_RS13430 PF00072 Response regulator receiver domain JG479_RS13430 PF00486 Transcriptional regulatory protein, C terminal JG479_RS13435 PF00072 Response regulator receiver domain JG479_RS13435 PF01627 Hpt domain JG479_RS13435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS13435 PF18415 Histidine kinase receptor ArcB trans-membrane domain JG479_RS13435 PF00989 PAS fold JG479_RS13435 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS13440 PF02649 Type I GTP cyclohydrolase folE2 JG479_RS13450 PF01048 Phosphorylase superfamily JG479_RS13460 PF00579 tRNA synthetases class I (W and Y) JG479_RS13475 PF00248 Aldo/keto reductase family JG479_RS13480 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JG479_RS13485 PF00682 HMGL-like JG479_RS13485 PF00364 Biotin-requiring enzyme JG479_RS13485 PF02436 Conserved carboxylase domain JG479_RS13490 PF04277 Oxaloacetate decarboxylase, gamma chain JG479_RS13510 PF02599 Global regulator protein family JG479_RS13515 PF00696 Amino acid kinase family JG479_RS13515 PF01842 ACT domain JG479_RS13515 PF13840 ACT domain JG479_RS13520 PF01411 tRNA synthetases class II (A) JG479_RS13520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JG479_RS13520 PF02272 DHHA1 domain JG479_RS13525 PF02631 RecX family JG479_RS13535 PF00925 GTP cyclohydrolase II JG479_RS13550 PF01451 Low molecular weight phosphotyrosine protein phosphatase JG479_RS13590 PF02080 TrkA-C domain JG479_RS13590 PF03471 Transporter associated domain JG479_RS13590 PF00999 Sodium/hydrogen exchanger family JG479_RS13595 PF03553 Na+/H+ antiporter family JG479_RS13600 PF00144 Beta-lactamase JG479_RS13605 PF07075 Protein of unknown function (DUF1343) JG479_RS13640 PF01336 OB-fold nucleic acid binding domain JG479_RS13640 PF00152 tRNA synthetases class II (D, K and N) JG479_RS13650 PF17768 RecJ OB domain JG479_RS13650 PF02272 DHHA1 domain JG479_RS13650 PF01368 DHH family JG479_RS13655 PF10411 Disulfide bond isomerase protein N-terminus JG479_RS13655 PF13098 Thioredoxin-like domain JG479_RS13660 PF00589 Phage integrase family JG479_RS13660 PF02899 Phage integrase, N-terminal SAM-like domain JG479_RS13665 PF00258 Flavodoxin JG479_RS13680 PF00128 Alpha amylase, catalytic domain JG479_RS13680 PF02806 Alpha amylase, C-terminal all-beta domain JG479_RS13685 PF05175 Methyltransferase small domain JG479_RS13690 PF00270 DEAD/DEAH box helicase JG479_RS13690 PF00271 Helicase conserved C-terminal domain JG479_RS13700 PF00924 Mechanosensitive ion channel JG479_RS13705 PF03883 Peroxide stress protein YaaA JG479_RS13710 PF00923 Transaldolase/Fructose-6-phosphate aldolase JG479_RS13720 PF03167 Uracil DNA glycosylase superfamily JG479_RS13725 PF01497 Periplasmic binding protein JG479_RS13730 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JG479_RS13730 PF12557 Cob(I)alamin adenosyltransferase N terminal JG479_RS13735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JG479_RS13735 PF07685 CobB/CobQ-like glutamine amidotransferase domain JG479_RS13740 PF01032 FecCD transport family JG479_RS13745 PF00005 ABC transporter JG479_RS13750 PF00267 Gram-negative porin JG479_RS13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS13755 PF03466 LysR substrate binding domain JG479_RS13760 PF04219 Protein of unknown function, DUF JG479_RS13765 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS13765 PF00072 Response regulator receiver domain JG479_RS13770 PF00892 EamA-like transporter family JG479_RS13775 PF03061 Thioesterase superfamily JG479_RS13780 PF00270 DEAD/DEAH box helicase JG479_RS13780 PF00271 Helicase conserved C-terminal domain JG479_RS13780 PF00570 HRDC domain JG479_RS13780 PF16124 RecQ zinc-binding JG479_RS13780 PF09382 RQC domain JG479_RS13805 PF18030 RimK PreATP-grasp domain JG479_RS13805 PF08443 RimK-like ATP-grasp domain JG479_RS13810 PF08443 RimK-like ATP-grasp domain JG479_RS13810 PF18030 RimK PreATP-grasp domain JG479_RS13815 PF01544 CorA-like Mg2+ transporter protein JG479_RS13825 PF06877 Regulator of ribonuclease activity B JG479_RS13830 PF01553 Acyltransferase JG479_RS13835 PF00521 DNA gyrase/topoisomerase IV, subunit A JG479_RS13835 PF03989 DNA gyrase C-terminal domain, beta-propeller JG479_RS13840 PF07995 Glucose / Sorbosone dehydrogenase JG479_RS13845 PF00204 DNA gyrase B JG479_RS13845 PF01751 Toprim domain JG479_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS13845 PF00986 DNA gyrase B subunit, carboxyl terminus JG479_RS13850 PF05728 Uncharacterised protein family (UPF0227) JG479_RS13855 PF00149 Calcineurin-like phosphoesterase JG479_RS13860 PF06853 Protein of unknown function (DUF1249) JG479_RS13865 PF00293 NUDIX domain JG479_RS13870 PF02321 Outer membrane efflux protein JG479_RS13875 PF03279 Bacterial lipid A biosynthesis acyltransferase JG479_RS13885 PF03710 Glutamate-ammonia ligase adenylyltransferase JG479_RS13885 PF08335 GlnD PII-uridylyltransferase JG479_RS13900 PF04452 RNA methyltransferase JG479_RS13905 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JG479_RS13905 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JG479_RS13910 PF02622 Uncharacterized ACR, COG1678 JG479_RS13915 PF03652 Holliday junction resolvase JG479_RS13920 PF00437 Type II/IV secretion system protein JG479_RS13925 PF00437 Type II/IV secretion system protein JG479_RS13930 PF01168 Alanine racemase, N-terminal domain JG479_RS13935 PF14748 Pyrroline-5-carboxylate reductase dimerisation JG479_RS13935 PF03807 NADP oxidoreductase coenzyme F420-dependent JG479_RS13940 PF02325 YGGT family JG479_RS13950 PF01725 Ham1 family JG479_RS13955 PF04055 Radical SAM superfamily JG479_RS13955 PF06969 HemN C-terminal domain JG479_RS13980 PF00583 Acetyltransferase (GNAT) family JG479_RS13980 PF13607 Succinyl-CoA ligase like flavodoxin domain JG479_RS13980 PF13380 CoA binding domain JG479_RS13985 PF00027 Cyclic nucleotide-binding domain JG479_RS13985 PF00520 Ion transport protein JG479_RS13990 PF00563 EAL domain JG479_RS13990 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS13990 PF03707 Bacterial signalling protein N terminal repeat JG479_RS14010 PF06945 Protein of unknown function (DUF1289) JG479_RS14020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JG479_RS14020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JG479_RS14030 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS14035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS14035 PF00072 Response regulator receiver domain JG479_RS14035 PF00672 HAMP domain JG479_RS14035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS14035 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS14035 PF01627 Hpt domain JG479_RS14040 PF02562 PhoH-like protein JG479_RS14040 PF13638 PIN domain JG479_RS14045 PF00271 Helicase conserved C-terminal domain JG479_RS14045 PF18337 RapA N-terminal Tudor like domain JG479_RS14045 PF18339 RapA N-terminal Tudor like domain 1 JG479_RS14045 PF00176 SNF2 family N-terminal domain JG479_RS14045 PF12137 RNA polymerase recycling family C-terminal JG479_RS14060 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JG479_RS14075 PF00581 Rhodanese-like domain JG479_RS14080 PF05159 Capsule polysaccharide biosynthesis protein JG479_RS14095 PF00563 EAL domain JG479_RS14095 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS14095 PF03707 Bacterial signalling protein N terminal repeat JG479_RS14105 PF01259 SAICAR synthetase JG479_RS14115 PF00005 ABC transporter JG479_RS14130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JG479_RS14130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JG479_RS14130 PF06827 Zinc finger found in FPG and IleRS JG479_RS14140 PF02833 DHHA2 domain JG479_RS14140 PF01368 DHH family JG479_RS14145 PF00471 Ribosomal protein L33 JG479_RS14150 PF00830 Ribosomal L28 family JG479_RS14155 PF04002 RadC-like JAB domain JG479_RS14160 PF02441 Flavoprotein JG479_RS14160 PF04127 DNA / pantothenate metabolism flavoprotein JG479_RS14165 PF00440 Bacterial regulatory proteins, tetR family JG479_RS14170 PF00326 Prolyl oligopeptidase family JG479_RS14170 PF07676 WD40-like Beta Propeller Repeat JG479_RS14180 PF05161 MOFRL family JG479_RS14180 PF13660 Domain of unknown function (DUF4147) JG479_RS14185 PF00474 Sodium:solute symporter family JG479_RS14190 PF00593 TonB dependent receptor JG479_RS14190 PF07715 TonB-dependent Receptor Plug Domain JG479_RS14200 PF00294 pfkB family carbohydrate kinase JG479_RS14215 PF01037 Lrp/AsnC ligand binding domain JG479_RS14220 PF00593 TonB dependent receptor JG479_RS14220 PF07715 TonB-dependent Receptor Plug Domain JG479_RS14230 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS14240 PF00082 Subtilase family JG479_RS14240 PF04151 Bacterial pre-peptidase C-terminal domain JG479_RS14245 PF00462 Glutaredoxin JG479_RS14245 PF08534 Redoxin JG479_RS14250 PF00483 Nucleotidyl transferase JG479_RS14260 PF00186 Dihydrofolate reductase JG479_RS14265 PF01926 50S ribosome-binding GTPase JG479_RS14265 PF01018 GTP1/OBG JG479_RS14270 PF01016 Ribosomal L27 protein JG479_RS14275 PF00829 Ribosomal prokaryotic L21 protein JG479_RS14280 PF00348 Polyprenyl synthetase JG479_RS14285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JG479_RS14285 PF00056 lactate/malate dehydrogenase, NAD binding domain JG479_RS14290 PF01316 Arginine repressor, DNA binding domain JG479_RS14290 PF02863 Arginine repressor, C-terminal domain JG479_RS14300 PF12857 TOBE-like domain JG479_RS14300 PF17850 CysA C-terminal regulatory domain JG479_RS14300 PF00005 ABC transporter JG479_RS14320 PF03942 DTW domain JG479_RS14325 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS14325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JG479_RS14330 PF02817 e3 binding domain JG479_RS14330 PF00364 Biotin-requiring enzyme JG479_RS14330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JG479_RS14335 PF17831 Pyruvate dehydrogenase E1 component middle domain JG479_RS14335 PF00456 Transketolase, thiamine diphosphate binding domain JG479_RS14340 PF07729 FCD domain JG479_RS14340 PF00392 Bacterial regulatory proteins, gntR family JG479_RS14345 PF03186 CobD/Cbib protein JG479_RS14350 PF01510 N-acetylmuramoyl-L-alanine amidase JG479_RS14355 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JG479_RS14355 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JG479_RS14360 PF00114 Pilin (bacterial filament) JG479_RS14360 PF07963 Prokaryotic N-terminal methylation motif JG479_RS14370 PF00482 Type II secretion system (T2SS), protein F JG479_RS14375 PF01478 Type IV leader peptidase family JG479_RS14375 PF06750 Bacterial Peptidase A24 N-terminal domain JG479_RS14380 PF01121 Dephospho-CoA kinase JG479_RS14385 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JG479_RS14385 PF00437 Type II/IV secretion system protein JG479_RS14390 PF03884 DNA gyrase inhibitor YacG JG479_RS14400 PF00486 Transcriptional regulatory protein, C terminal JG479_RS14400 PF00072 Response regulator receiver domain JG479_RS14405 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS14405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS14405 PF00672 HAMP domain JG479_RS14405 PF16527 Two-component sensor protein CpxA, periplasmic domain JG479_RS14410 PF12146 Serine aminopeptidase, S33 JG479_RS14415 PF16916 Dimerisation domain of Zinc Transporter JG479_RS14415 PF01545 Cation efflux family JG479_RS14420 PF00588 SpoU rRNA Methylase family JG479_RS14425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JG479_RS14425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JG479_RS14430 PF02556 Preprotein translocase subunit SecB JG479_RS14435 PF00462 Glutaredoxin JG479_RS14440 PF00581 Rhodanese-like domain JG479_RS14445 PF01676 Metalloenzyme superfamily JG479_RS14445 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JG479_RS14450 PF01551 Peptidase family M23 JG479_RS14455 PF13180 PDZ domain JG479_RS14455 PF03572 Peptidase family S41 JG479_RS14465 PF04542 Sigma-70 region 2 JG479_RS14465 PF00140 Sigma-70 factor, region 1.2 JG479_RS14465 PF04545 Sigma-70, region 4 JG479_RS14470 PF18075 FtsX extracellular domain JG479_RS14475 PF00005 ABC transporter JG479_RS14480 PF00448 SRP54-type protein, GTPase domain JG479_RS14480 PF02881 SRP54-type protein, helical bundle domain JG479_RS14490 PF01165 Ribosomal protein S21 JG479_RS14500 PF08278 DNA primase DnaG DnaB-binding JG479_RS14500 PF08275 DNA primase catalytic core, N-terminal domain JG479_RS14500 PF01807 CHC2 zinc finger JG479_RS14500 PF10410 DnaB-helicase binding domain of primase JG479_RS14505 PF04542 Sigma-70 region 2 JG479_RS14505 PF04545 Sigma-70, region 4 JG479_RS14505 PF03979 Sigma-70 factor, region 1.1 JG479_RS14505 PF04546 Sigma-70, non-essential region JG479_RS14505 PF04539 Sigma-70 region 3 JG479_RS14505 PF00140 Sigma-70 factor, region 1.2 JG479_RS14515 PF01207 Dihydrouridine synthase (Dus) JG479_RS14520 PF02954 Bacterial regulatory protein, Fis family JG479_RS14525 PF02142 MGS-like domain JG479_RS14525 PF01808 AICARFT/IMPCHase bienzyme JG479_RS14535 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JG479_RS14535 PF02844 Phosphoribosylglycinamide synthetase, N domain JG479_RS14535 PF02843 Phosphoribosylglycinamide synthetase, C domain JG479_RS14540 PF00563 EAL domain JG479_RS14540 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS14540 PF08448 PAS fold JG479_RS14540 PF08447 PAS fold JG479_RS14555 PF00850 Histone deacetylase domain JG479_RS14570 PF01810 LysE type translocator JG479_RS14600 PF01679 Proteolipid membrane potential modulator JG479_RS14605 PF04972 BON domain JG479_RS14620 PF00459 Inositol monophosphatase family JG479_RS14630 PF00563 EAL domain JG479_RS14630 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS14630 PF03707 Bacterial signalling protein N terminal repeat JG479_RS14635 PF07549 SecD/SecF GG Motif JG479_RS14635 PF02355 Protein export membrane protein JG479_RS14640 PF13721 SecD export protein N-terminal TM region JG479_RS14640 PF02355 Protein export membrane protein JG479_RS14640 PF07549 SecD/SecF GG Motif JG479_RS14645 PF02699 Preprotein translocase subunit JG479_RS14650 PF01702 Queuine tRNA-ribosyltransferase JG479_RS14655 PF02547 Queuosine biosynthesis protein JG479_RS14660 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS14660 PF00563 EAL domain JG479_RS14660 PF08448 PAS fold JG479_RS14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS14670 PF03466 LysR substrate binding domain JG479_RS14675 PF01384 Phosphate transporter family JG479_RS14680 PF01865 Protein of unknown function DUF47 JG479_RS14685 PF01895 PhoU domain JG479_RS14690 PF00005 ABC transporter JG479_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS14700 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS14705 PF01842 ACT domain JG479_RS14715 PF00873 AcrB/AcrD/AcrF family JG479_RS14740 PF08668 HDOD domain JG479_RS14740 PF00563 EAL domain JG479_RS14750 PF08274 PhnA Zinc-Ribbon JG479_RS14750 PF03831 PhnA domain JG479_RS14760 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JG479_RS14780 PF01476 LysM domain JG479_RS14780 PF01464 Transglycosylase SLT domain JG479_RS14785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JG479_RS14795 PF04909 Amidohydrolase JG479_RS14805 PF13378 Enolase C-terminal domain-like JG479_RS14805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JG479_RS14810 PF00596 Class II Aldolase and Adducin N-terminal domain JG479_RS14815 PF00034 Cytochrome c JG479_RS14850 PF01627 Hpt domain JG479_RS14850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS14850 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS14850 PF00672 HAMP domain JG479_RS14850 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS14850 PF00072 Response regulator receiver domain JG479_RS14855 PF00563 EAL domain JG479_RS14855 PF03707 Bacterial signalling protein N terminal repeat JG479_RS14855 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS14860 PF00171 Aldehyde dehydrogenase family JG479_RS14865 PF00696 Amino acid kinase family JG479_RS14875 PF08238 Sel1 repeat JG479_RS14880 PF00709 Adenylosuccinate synthetase JG479_RS14885 PF01145 SPFH domain / Band 7 family JG479_RS14890 PF01145 SPFH domain / Band 7 family JG479_RS14890 PF12221 Bacterial membrane protein N terminal JG479_RS14895 PF16360 GTP-binding GTPase Middle Region JG479_RS14895 PF13167 GTP-binding GTPase N-terminal JG479_RS14895 PF01926 50S ribosome-binding GTPase JG479_RS14900 PF17209 Hfq protein JG479_RS14910 PF01119 DNA mismatch repair protein, C-terminal domain JG479_RS14910 PF08676 MutL C terminal dimerisation domain JG479_RS14915 PF01520 N-acetylmuramoyl-L-alanine amidase JG479_RS14920 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JG479_RS14925 PF00366 Ribosomal protein S17 JG479_RS14930 PF00831 Ribosomal L29 protein JG479_RS14935 PF00252 Ribosomal protein L16p/L10e JG479_RS14940 PF07650 KH domain JG479_RS14940 PF00189 Ribosomal protein S3, C-terminal domain JG479_RS14945 PF00237 Ribosomal protein L22p/L17e JG479_RS14950 PF00203 Ribosomal protein S19 JG479_RS14955 PF00181 Ribosomal Proteins L2, RNA binding domain JG479_RS14955 PF03947 Ribosomal Proteins L2, C-terminal domain JG479_RS14960 PF00276 Ribosomal protein L23 JG479_RS14965 PF00573 Ribosomal protein L4/L1 family JG479_RS14970 PF00297 Ribosomal protein L3 JG479_RS14975 PF00338 Ribosomal protein S10p/S20e JG479_RS14980 PF01553 Acyltransferase JG479_RS15010 PF02667 Short chain fatty acid transporter JG479_RS15015 PF00664 ABC transporter transmembrane region JG479_RS15015 PF00005 ABC transporter JG479_RS15015 PF03412 Peptidase C39 family JG479_RS15045 PF00563 EAL domain JG479_RS15045 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS15045 PF03707 Bacterial signalling protein N terminal repeat JG479_RS15050 PF01595 Cyclin M transmembrane N-terminal domain JG479_RS15050 PF00571 CBS domain JG479_RS15060 PF00486 Transcriptional regulatory protein, C terminal JG479_RS15060 PF00072 Response regulator receiver domain JG479_RS15065 PF01078 Magnesium chelatase, subunit ChlI JG479_RS15065 PF13335 Magnesium chelatase, subunit ChlI C-terminal JG479_RS15070 PF03458 UPF0126 domain JG479_RS15090 PF00459 Inositol monophosphatase family JG479_RS15095 PF00293 NUDIX domain JG479_RS15100 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS15110 PF06062 Uncharacterised protein family (UPF0231) JG479_RS15120 PF13361 UvrD-like helicase C-terminal domain JG479_RS15120 PF00580 UvrD/REP helicase N-terminal domain JG479_RS15125 PF13718 GNAT acetyltransferase 2 JG479_RS15125 PF05127 Helicase JG479_RS15125 PF17176 tRNA-binding domain JG479_RS15125 PF08351 Domain of unknown function (DUF1726) JG479_RS15150 PF01196 Ribosomal protein L17 JG479_RS15155 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JG479_RS15155 PF01000 RNA polymerase Rpb3/RpoA insert domain JG479_RS15155 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JG479_RS15160 PF00163 Ribosomal protein S4/S9 N-terminal domain JG479_RS15160 PF01479 S4 domain JG479_RS15165 PF00411 Ribosomal protein S11 JG479_RS15170 PF00416 Ribosomal protein S13/S18 JG479_RS15175 PF00444 Ribosomal protein L36 JG479_RS15180 PF00344 SecY translocase JG479_RS15185 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JG479_RS15190 PF00327 Ribosomal protein L30p/L7e JG479_RS15195 PF03719 Ribosomal protein S5, C-terminal domain JG479_RS15195 PF00333 Ribosomal protein S5, N-terminal domain JG479_RS15200 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JG479_RS15205 PF00347 Ribosomal protein L6 JG479_RS15210 PF00410 Ribosomal protein S8 JG479_RS15215 PF00253 Ribosomal protein S14p/S29e JG479_RS15220 PF00673 ribosomal L5P family C-terminus JG479_RS15220 PF00281 Ribosomal protein L5 JG479_RS15225 PF00467 KOW motif JG479_RS15225 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JG479_RS15230 PF00238 Ribosomal protein L14p/L23e JG479_RS15265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JG479_RS15270 PF00005 ABC transporter JG479_RS15275 PF02687 FtsX-like permease family JG479_RS15275 PF12704 MacB-like periplasmic core domain JG479_RS15285 PF06291 Bor protein JG479_RS15295 PF00005 ABC transporter JG479_RS15305 PF01022 Bacterial regulatory protein, arsR family JG479_RS15325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JG479_RS15325 PF11852 Domain of unknown function (DUF3372) JG479_RS15325 PF03714 Bacterial pullanase-associated domain JG479_RS15325 PF18494 Pullulanase Ins domain JG479_RS15325 PF17967 Pullulanase N2 domain JG479_RS15335 PF01810 LysE type translocator JG479_RS15350 PF00005 ABC transporter JG479_RS15350 PF00664 ABC transporter transmembrane region JG479_RS15355 PF13488 Glycine zipper JG479_RS15355 PF00691 OmpA family JG479_RS15365 PF00924 Mechanosensitive ion channel JG479_RS15370 PF01553 Acyltransferase JG479_RS15375 PF01553 Acyltransferase JG479_RS15380 PF17944 Arginine decarboxylase C-terminal helical extension JG479_RS15380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JG479_RS15380 PF17810 Arginine decarboxylase helical bundle domain JG479_RS15385 PF17284 Spermidine synthase tetramerisation domain JG479_RS15390 PF02743 Cache domain JG479_RS15390 PF00672 HAMP domain JG479_RS15390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS15405 PF10566 Glycoside hydrolase 97 JG479_RS15405 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation JG479_RS15405 PF14508 Glycosyl-hydrolase 97 N-terminal JG479_RS15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS15410 PF00672 HAMP domain JG479_RS15410 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS15415 PF00486 Transcriptional regulatory protein, C terminal JG479_RS15415 PF00072 Response regulator receiver domain JG479_RS15440 PF13007 Transposase C of IS166 homeodomain JG479_RS15440 PF03050 Transposase IS66 family JG479_RS15440 PF13005 zinc-finger binding domain of transposase IS66 JG479_RS15440 PF13817 IS66 C-terminal element JG479_RS15445 PF00665 Integrase core domain JG479_RS15445 PF13276 HTH-like domain JG479_RS15445 PF13333 Integrase core domain JG479_RS15465 PF05425 Copper resistance protein D JG479_RS15475 PF05275 Copper resistance protein B precursor (CopB) JG479_RS15480 PF00394 Multicopper oxidase JG479_RS15480 PF07732 Multicopper oxidase JG479_RS15480 PF07731 Multicopper oxidase JG479_RS15485 PF00486 Transcriptional regulatory protein, C terminal JG479_RS15485 PF00072 Response regulator receiver domain JG479_RS15490 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS15490 PF00672 HAMP domain JG479_RS15500 PF05717 IS66 Orf2 like protein JG479_RS15540 PF00873 AcrB/AcrD/AcrF family JG479_RS15545 PF08019 Phosphoethanolamine transferase EptA/EptB JG479_RS15545 PF00884 Sulfatase JG479_RS15550 PF01545 Cation efflux family JG479_RS15560 PF01219 Prokaryotic diacylglycerol kinase JG479_RS15570 PF08463 EcoEI R protein C-terminal JG479_RS15570 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) JG479_RS15570 PF04851 Type III restriction enzyme, res subunit JG479_RS15570 PF00271 Helicase conserved C-terminal domain JG479_RS15580 PF12161 HsdM N-terminal domain JG479_RS15580 PF02384 N-6 DNA Methylase JG479_RS15595 PF04851 Type III restriction enzyme, res subunit JG479_RS15605 PF01966 HD domain JG479_RS15605 PF00072 Response regulator receiver domain JG479_RS15620 PF03449 Transcription elongation factor, N-terminal JG479_RS15620 PF01272 Transcription elongation factor, GreA/GreB, C-term JG479_RS15655 PF00575 S1 RNA binding domain JG479_RS15655 PF17674 HHH domain JG479_RS15655 PF09371 Tex-like protein N-terminal domain JG479_RS15655 PF16921 Tex protein YqgF-like domain JG479_RS15670 PF12697 Alpha/beta hydrolase family JG479_RS15675 PF00156 Phosphoribosyl transferase domain JG479_RS15685 PF01521 Iron-sulphur cluster biosynthesis JG479_RS15685 PF01106 NifU-like domain JG479_RS15695 PF01554 MatE JG479_RS15700 PF01522 Polysaccharide deacetylase JG479_RS15705 PF01339 CheB methylesterase JG479_RS15705 PF00072 Response regulator receiver domain JG479_RS15710 PF03975 CheD chemotactic sensory transduction JG479_RS15715 PF01739 CheR methyltransferase, SAM binding domain JG479_RS15715 PF03705 CheR methyltransferase, all-alpha domain JG479_RS15720 PF08447 PAS fold JG479_RS15720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS15720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS15720 PF13426 PAS domain JG479_RS15720 PF08447 PAS fold JG479_RS15720 PF13426 PAS domain JG479_RS15725 PF01584 CheW-like domain JG479_RS15730 PF01584 CheW-like domain JG479_RS15730 PF09078 CheY binding JG479_RS15730 PF02895 Signal transducing histidine kinase, homodimeric domain JG479_RS15730 PF01627 Hpt domain JG479_RS15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS15735 PF00072 Response regulator receiver domain JG479_RS15750 PF01040 UbiA prenyltransferase family JG479_RS15755 PF02628 Cytochrome oxidase assembly protein JG479_RS15775 PF00510 Cytochrome c oxidase subunit III JG479_RS15780 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JG479_RS15785 PF00115 Cytochrome C and Quinol oxidase polypeptide I JG479_RS15790 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JG479_RS15790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JG479_RS15795 PF01726 LexA DNA binding domain JG479_RS15795 PF00717 Peptidase S24-like JG479_RS15800 PF03061 Thioesterase superfamily JG479_RS15820 PF01556 DnaJ C terminal domain JG479_RS15820 PF00226 DnaJ domain JG479_RS15825 PF04231 Endonuclease I JG479_RS15840 PF00175 Oxidoreductase NAD-binding domain JG479_RS15840 PF00042 Globin JG479_RS15840 PF00970 Oxidoreductase FAD-binding domain JG479_RS15850 PF00158 Sigma-54 interaction domain JG479_RS15850 PF01590 GAF domain JG479_RS15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS15855 PF03466 LysR substrate binding domain JG479_RS15860 PF03358 NADPH-dependent FMN reductase JG479_RS15895 PF02541 Ppx/GppA phosphatase family JG479_RS15900 PF00271 Helicase conserved C-terminal domain JG479_RS15900 PF00270 DEAD/DEAH box helicase JG479_RS15905 PF00085 Thioredoxin JG479_RS15910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JG479_RS15910 PF07498 Rho termination factor, N-terminal domain JG479_RS15910 PF07497 Rho termination factor, RNA-binding domain JG479_RS15915 PF01627 Hpt domain JG479_RS15915 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS15915 PF00072 Response regulator receiver domain JG479_RS15915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS15925 PF00271 Helicase conserved C-terminal domain JG479_RS15925 PF03880 DbpA RNA binding domain JG479_RS15925 PF00270 DEAD/DEAH box helicase JG479_RS15930 PF00593 TonB dependent receptor JG479_RS15930 PF07715 TonB-dependent Receptor Plug Domain JG479_RS15935 PF04151 Bacterial pre-peptidase C-terminal domain JG479_RS15935 PF04389 Peptidase family M28 JG479_RS15945 PF05661 Protein of unknown function (DUF808) JG479_RS15955 PF00672 HAMP domain JG479_RS15955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS15960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JG479_RS15965 PF00175 Oxidoreductase NAD-binding domain JG479_RS15970 PF03061 Thioesterase superfamily JG479_RS15970 PF00392 Bacterial regulatory proteins, gntR family JG479_RS15970 PF00571 CBS domain JG479_RS15970 PF07085 DRTGG domain JG479_RS15975 PF00962 Adenosine/AMP deaminase JG479_RS15980 PF00072 Response regulator receiver domain JG479_RS15980 PF09308 LuxQ, periplasmic JG479_RS15980 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS15990 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JG479_RS15995 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JG479_RS15995 PF03900 Porphobilinogen deaminase, C-terminal domain JG479_RS16005 PF02230 Phospholipase/Carboxylesterase JG479_RS16010 PF01491 Frataxin-like domain JG479_RS16020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JG479_RS16020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JG479_RS16025 PF01678 Diaminopimelate epimerase JG479_RS16035 PF00589 Phage integrase family JG479_RS16035 PF02899 Phage integrase, N-terminal SAM-like domain JG479_RS16040 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS16065 PF01479 S4 domain JG479_RS16065 PF00849 RNA pseudouridylate synthase JG479_RS16070 PF03965 Penicillinase repressor JG479_RS16090 PF00893 Small Multidrug Resistance protein JG479_RS16095 PF00795 Carbon-nitrogen hydrolase JG479_RS16095 PF00583 Acetyltransferase (GNAT) family JG479_RS16100 PF00753 Metallo-beta-lactamase superfamily JG479_RS16100 PF16123 Hydroxyacylglutathione hydrolase C-terminus JG479_RS16110 PF18381 YcaO cyclodehydratase C-terminal domain JG479_RS16110 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JG479_RS16115 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS16115 PF01627 Hpt domain JG479_RS16115 PF00072 Response regulator receiver domain JG479_RS16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS16115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS16115 PF00672 HAMP domain JG479_RS16120 PF04337 Protein of unknown function, DUF480 JG479_RS16125 PF02540 NAD synthase JG479_RS16135 PF01227 GTP cyclohydrolase I JG479_RS16140 PF02152 Dihydroneopterin aldolase JG479_RS16145 PF09335 SNARE associated Golgi protein JG479_RS16165 PF00072 Response regulator receiver domain JG479_RS16165 PF00486 Transcriptional regulatory protein, C terminal JG479_RS16170 PF00072 Response regulator receiver domain JG479_RS16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS16170 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS16170 PF00497 Bacterial extracellular solute-binding proteins, family 3 JG479_RS16175 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JG479_RS16175 PF00326 Prolyl oligopeptidase family JG479_RS16190 PF00082 Subtilase family JG479_RS16190 PF01483 Proprotein convertase P-domain JG479_RS16200 PF00873 AcrB/AcrD/AcrF family JG479_RS16215 PF02567 Phenazine biosynthesis-like protein JG479_RS16220 PF00114 Pilin (bacterial filament) JG479_RS16220 PF07963 Prokaryotic N-terminal methylation motif JG479_RS16250 PF03703 Bacterial PH domain JG479_RS16260 PF01263 Aldose 1-epimerase JG479_RS16275 PF04304 Protein of unknown function (DUF454) JG479_RS16295 PF00593 TonB dependent receptor JG479_RS16295 PF07715 TonB-dependent Receptor Plug Domain JG479_RS16305 PF02254 TrkA-N domain JG479_RS16305 PF00999 Sodium/hydrogen exchanger family JG479_RS16330 PF00245 Alkaline phosphatase JG479_RS16335 PF00245 Alkaline phosphatase JG479_RS16340 PF00392 Bacterial regulatory proteins, gntR family JG479_RS16340 PF07702 UTRA domain JG479_RS16350 PF00313 'Cold-shock' DNA-binding domain JG479_RS16355 PF00313 'Cold-shock' DNA-binding domain JG479_RS16360 PF00313 'Cold-shock' DNA-binding domain JG479_RS16370 PF02310 B12 binding domain JG479_RS16370 PF02607 B12 binding domain JG479_RS16370 PF02965 Vitamin B12 dependent methionine synthase, activation domain JG479_RS16370 PF00809 Pterin binding enzyme JG479_RS16370 PF02574 Homocysteine S-methyltransferase JG479_RS16375 PF02028 BCCT, betaine/carnitine/choline family transporter JG479_RS16385 PF00593 TonB dependent receptor JG479_RS16385 PF07715 TonB-dependent Receptor Plug Domain JG479_RS16400 PF00270 DEAD/DEAH box helicase JG479_RS16400 PF00271 Helicase conserved C-terminal domain JG479_RS16410 PF01380 SIS domain JG479_RS16415 PF00455 DeoR C terminal sensor domain JG479_RS16415 PF08220 DeoR-like helix-turn-helix domain JG479_RS16425 PF14602 Hexapeptide repeat of succinyl-transferase JG479_RS16425 PF12464 Maltose acetyltransferase JG479_RS16460 PF00132 Bacterial transferase hexapeptide (six repeats) JG479_RS16460 PF14602 Hexapeptide repeat of succinyl-transferase JG479_RS16460 PF12804 MobA-like NTP transferase domain JG479_RS16465 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JG479_RS16465 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JG479_RS16470 PF02874 ATP synthase alpha/beta family, beta-barrel domain JG479_RS16470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JG479_RS16475 PF00231 ATP synthase JG479_RS16480 PF00306 ATP synthase alpha/beta chain, C terminal domain JG479_RS16480 PF02874 ATP synthase alpha/beta family, beta-barrel domain JG479_RS16480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JG479_RS16485 PF00213 ATP synthase delta (OSCP) subunit JG479_RS16490 PF00430 ATP synthase B/B' CF(0) JG479_RS16495 PF00137 ATP synthase subunit C JG479_RS16500 PF00119 ATP synthase A chain JG479_RS16505 PF03899 ATP synthase I chain JG479_RS16510 PF17762 HTH domain found in ParB protein JG479_RS16510 PF02195 ParB-like nuclease domain JG479_RS16515 PF13614 AAA domain JG479_RS16520 PF02527 rRNA small subunit methyltransferase G JG479_RS16525 PF13932 GidA associated domain JG479_RS16525 PF01134 Glucose inhibited division protein A JG479_RS16530 PF00258 Flavodoxin JG479_RS16535 PF10396 GTP-binding protein TrmE N-terminus JG479_RS16535 PF12631 MnmE helical domain JG479_RS16535 PF01926 50S ribosome-binding GTPase JG479_RS16540 PF02096 60Kd inner membrane protein JG479_RS16540 PF14849 YidC periplasmic domain JG479_RS16545 PF01809 Putative membrane protein insertion efficiency factor JG479_RS16550 PF00825 Ribonuclease P JG479_RS16555 PF00468 Ribosomal protein L34 JG479_RS16575 PF01709 Transcriptional regulator JG479_RS16580 PF01274 Malate synthase JG479_RS16585 PF00463 Isocitrate lyase family JG479_RS16595 PF03746 LamB/YcsF family JG479_RS16600 PF00933 Glycosyl hydrolase family 3 N terminal domain JG479_RS16605 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS16605 PF17158 Membrane-associated sensor, integral membrane domain JG479_RS16625 PF07715 TonB-dependent Receptor Plug Domain JG479_RS16625 PF00593 TonB dependent receptor JG479_RS16630 PF01497 Periplasmic binding protein JG479_RS16635 PF01032 FecCD transport family JG479_RS16640 PF00005 ABC transporter JG479_RS16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS16670 PF03466 LysR substrate binding domain JG479_RS16675 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS16680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JG479_RS16685 PF03466 LysR substrate binding domain JG479_RS16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS16690 PF03466 LysR substrate binding domain JG479_RS16695 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS16695 PF00107 Zinc-binding dehydrogenase JG479_RS16720 PF00248 Aldo/keto reductase family JG479_RS16730 PF02646 RmuC family JG479_RS16735 PF04434 SWIM zinc finger JG479_RS16735 PF00271 Helicase conserved C-terminal domain JG479_RS16735 PF00176 SNF2 family N-terminal domain JG479_RS16745 PF13614 AAA domain JG479_RS16760 PF01474 Class-II DAHP synthetase family JG479_RS16765 PF03618 Kinase/pyrophosphorylase JG479_RS16770 PF00391 PEP-utilising enzyme, mobile domain JG479_RS16770 PF02896 PEP-utilising enzyme, TIM barrel domain JG479_RS16770 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JG479_RS16780 PF13183 4Fe-4S dicluster domain JG479_RS16780 PF02913 FAD linked oxidases, C-terminal domain JG479_RS16780 PF01565 FAD binding domain JG479_RS16785 PF02080 TrkA-C domain JG479_RS16785 PF00999 Sodium/hydrogen exchanger family JG479_RS16785 PF03471 Transporter associated domain JG479_RS16810 PF01235 Sodium:alanine symporter family JG479_RS16820 PF02423 Ornithine cyclodeaminase/mu-crystallin family JG479_RS16845 PF01734 Patatin-like phospholipase JG479_RS16850 PF00296 Luciferase-like monooxygenase JG479_RS16865 PF00717 Peptidase S24-like JG479_RS16870 PF13438 Domain of unknown function (DUF4113) JG479_RS16870 PF11799 impB/mucB/samB family C-terminal domain JG479_RS16870 PF00817 impB/mucB/samB family JG479_RS16885 PF09962 Uncharacterized conserved protein (DUF2196) JG479_RS16910 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS16910 PF00563 EAL domain JG479_RS16910 PF03707 Bacterial signalling protein N terminal repeat JG479_RS16915 PF02774 Semialdehyde dehydrogenase, dimerisation domain JG479_RS16915 PF01118 Semialdehyde dehydrogenase, NAD binding domain JG479_RS16935 PF03544 Gram-negative bacterial TonB protein C-terminal JG479_RS16940 PF02472 Biopolymer transport protein ExbD/TolR JG479_RS16945 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS16950 PF01618 MotA/TolQ/ExbB proton channel family JG479_RS16970 PF02743 Cache domain JG479_RS16970 PF00672 HAMP domain JG479_RS16970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS16975 PF07690 Major Facilitator Superfamily JG479_RS16990 PF03692 Putative zinc- or iron-chelating domain JG479_RS17000 PF01979 Amidohydrolase family JG479_RS17005 PF07715 TonB-dependent Receptor Plug Domain JG479_RS17005 PF00593 TonB dependent receptor JG479_RS17010 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS17010 PF00107 Zinc-binding dehydrogenase JG479_RS17020 PF13406 Transglycosylase SLT domain JG479_RS17025 PF05166 YcgL domain JG479_RS17030 PF03775 Septum formation inhibitor MinC, C-terminal domain JG479_RS17030 PF05209 Septum formation inhibitor MinC, N-terminal domain JG479_RS17035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JG479_RS17040 PF03776 Septum formation topological specificity factor MinE JG479_RS17045 PF13505 Outer membrane protein beta-barrel domain JG479_RS17050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS17050 PF03466 LysR substrate binding domain JG479_RS17055 PF00570 HRDC domain JG479_RS17055 PF01612 3'-5' exonuclease JG479_RS17060 PF13193 AMP-binding enzyme C-terminal domain JG479_RS17060 PF00501 AMP-binding enzyme JG479_RS17065 PF12146 Serine aminopeptidase, S33 JG479_RS17070 PF00245 Alkaline phosphatase JG479_RS17080 PF00814 Glycoprotease family JG479_RS17085 PF13307 Helicase C-terminal domain JG479_RS17085 PF04851 Type III restriction enzyme, res subunit JG479_RS17090 PF00999 Sodium/hydrogen exchanger family JG479_RS17095 PF03239 Iron permease FTR1 family JG479_RS17105 PF08029 HisG, C-terminal domain JG479_RS17105 PF01634 ATP phosphoribosyltransferase JG479_RS17110 PF00815 Histidinol dehydrogenase JG479_RS17115 PF00155 Aminotransferase class I and II JG479_RS17120 PF00475 Imidazoleglycerol-phosphate dehydratase JG479_RS17120 PF08645 Polynucleotide kinase 3 phosphatase JG479_RS17125 PF00117 Glutamine amidotransferase class-I JG479_RS17130 PF00977 Histidine biosynthesis protein JG479_RS17135 PF00977 Histidine biosynthesis protein JG479_RS17140 PF01502 Phosphoribosyl-AMP cyclohydrolase JG479_RS17140 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JG479_RS17155 PF01202 Shikimate kinase JG479_RS17160 PF02447 GntP family permease JG479_RS17165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JG479_RS17165 PF00356 Bacterial regulatory proteins, lacI family JG479_RS17180 PF10459 Peptidase S46 JG479_RS17185 PF03707 Bacterial signalling protein N terminal repeat JG479_RS17185 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS17185 PF00563 EAL domain JG479_RS17195 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS17200 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JG479_RS17200 PF11892 Domain of unknown function (DUF3412) JG479_RS17200 PF03641 Possible lysine decarboxylase JG479_RS17205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JG479_RS17205 PF01367 5'-3' exonuclease, C-terminal SAM fold JG479_RS17220 PF00180 Isocitrate/isopropylmalate dehydrogenase JG479_RS17220 PF18324 Hypothetical protein TT1725 JG479_RS17225 PF00801 PKD domain JG479_RS17225 PF05547 Immune inhibitor A peptidase M6 JG479_RS17230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JG479_RS17230 PF00205 Thiamine pyrophosphate enzyme, central domain JG479_RS17230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JG479_RS17235 PF10369 Small subunit of acetolactate synthase JG479_RS17240 PF00216 Bacterial DNA-binding protein JG479_RS17275 PF00106 short chain dehydrogenase JG479_RS17285 PF00875 DNA photolyase JG479_RS17285 PF03441 FAD binding domain of DNA photolyase JG479_RS17300 PF04545 Sigma-70, region 4 JG479_RS17300 PF04542 Sigma-70 region 2 JG479_RS17315 PF16655 PhoD-like phosphatase, N-terminal domain JG479_RS17315 PF09423 PhoD-like phosphatase JG479_RS17320 PF14600 Cellulose-binding domain JG479_RS17320 PF00150 Cellulase (glycosyl hydrolase family 5) JG479_RS17330 PF07715 TonB-dependent Receptor Plug Domain JG479_RS17330 PF00593 TonB dependent receptor JG479_RS17335 PF03006 Haemolysin-III related JG479_RS17355 PF01965 DJ-1/PfpI family JG479_RS17370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JG479_RS17375 PF00873 AcrB/AcrD/AcrF family JG479_RS17380 PF01043 SecA preprotein cross-linking domain JG479_RS17380 PF07516 SecA Wing and Scaffold domain JG479_RS17380 PF02810 SEC-C motif JG479_RS17380 PF07517 SecA DEAD-like domain JG479_RS17400 PF01479 S4 domain JG479_RS17400 PF00849 RNA pseudouridylate synthase JG479_RS17405 PF04235 Protein of unknown function (DUF418) JG479_RS17410 PF08668 HDOD domain JG479_RS17410 PF00563 EAL domain JG479_RS17415 PF00534 Glycosyl transferases group 1 JG479_RS17415 PF08323 Starch synthase catalytic domain JG479_RS17420 PF00483 Nucleotidyl transferase JG479_RS17425 PF00343 Carbohydrate phosphorylase JG479_RS17430 PF00128 Alpha amylase, catalytic domain JG479_RS17430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JG479_RS17435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JG479_RS17435 PF02806 Alpha amylase, C-terminal all-beta domain JG479_RS17435 PF00128 Alpha amylase, catalytic domain JG479_RS17440 PF02446 4-alpha-glucanotransferase JG479_RS17465 PF01037 Lrp/AsnC ligand binding domain JG479_RS17470 PF00202 Aminotransferase class-III JG479_RS17475 PF04958 Arginine N-succinyltransferase beta subunit JG479_RS17480 PF00171 Aldehyde dehydrogenase family JG479_RS17505 PF13977 BetI-type transcriptional repressor, C-terminal JG479_RS17505 PF00440 Bacterial regulatory proteins, tetR family JG479_RS17510 PF00171 Aldehyde dehydrogenase family JG479_RS17515 PF05199 GMC oxidoreductase JG479_RS17515 PF00732 GMC oxidoreductase JG479_RS17530 PF00563 EAL domain JG479_RS17530 PF03707 Bacterial signalling protein N terminal repeat JG479_RS17530 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS17540 PF11953 Domain of unknown function (DUF3470) JG479_RS17540 PF00037 4Fe-4S binding domain JG479_RS17550 PF01425 Amidase JG479_RS17555 PF00271 Helicase conserved C-terminal domain JG479_RS17555 PF00270 DEAD/DEAH box helicase JG479_RS17560 PF00701 Dihydrodipicolinate synthetase family JG479_RS17600 PF00248 Aldo/keto reductase family JG479_RS17605 PF07690 Major Facilitator Superfamily JG479_RS17610 PF03466 LysR substrate binding domain JG479_RS17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS17615 PF07690 Major Facilitator Superfamily JG479_RS17620 PF13185 GAF domain JG479_RS17620 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS17630 PF01197 Ribosomal protein L31 JG479_RS17635 PF00444 Ribosomal protein L36 JG479_RS17650 PF00593 TonB dependent receptor JG479_RS17650 PF07715 TonB-dependent Receptor Plug Domain JG479_RS17655 PF00128 Alpha amylase, catalytic domain JG479_RS17670 PF00860 Permease family JG479_RS17725 PF13495 Phage integrase, N-terminal SAM-like domain JG479_RS17725 PF00589 Phage integrase family JG479_RS17775 PF18818 Metallopeptidase superfamily domain JG479_RS17775 PF08401 Domain of unknown function (DUF1738) JG479_RS17775 PF13362 Toprim domain JG479_RS17800 PF02463 RecF/RecN/SMC N terminal domain JG479_RS17825 PF02770 Acyl-CoA dehydrogenase, middle domain JG479_RS17825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JG479_RS17825 PF09317 Domain of unknown function (DUF1974) JG479_RS17825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JG479_RS17830 PF08240 Alcohol dehydrogenase GroES-like domain JG479_RS17830 PF00107 Zinc-binding dehydrogenase JG479_RS17835 PF02321 Outer membrane efflux protein JG479_RS17840 PF00873 AcrB/AcrD/AcrF family JG479_RS17845 PF13533 Biotin-lipoyl like JG479_RS17850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS17850 PF03466 LysR substrate binding domain JG479_RS17855 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS17855 PF17156 Gammaproteobacterial periplasmic sensor domain JG479_RS17860 PF04055 Radical SAM superfamily JG479_RS17860 PF06463 Molybdenum Cofactor Synthesis C JG479_RS17865 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JG479_RS17870 PF01799 [2Fe-2S] binding domain JG479_RS17870 PF00111 2Fe-2S iron-sulfur cluster binding domain JG479_RS17880 PF13478 XdhC Rossmann domain JG479_RS17880 PF02625 XdhC and CoxI family JG479_RS17895 PF00171 Aldehyde dehydrogenase family JG479_RS17900 PF00939 Sodium:sulfate symporter transmembrane region JG479_RS17905 PF00267 Gram-negative porin JG479_RS17910 PF00158 Sigma-54 interaction domain JG479_RS17910 PF00072 Response regulator receiver domain JG479_RS17910 PF02954 Bacterial regulatory protein, Fis family JG479_RS17915 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS17915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS17915 PF02743 Cache domain JG479_RS17925 PF01627 Hpt domain JG479_RS17925 PF00497 Bacterial extracellular solute-binding proteins, family 3 JG479_RS17925 PF00072 Response regulator receiver domain JG479_RS17925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS17925 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS17935 PF04073 Aminoacyl-tRNA editing domain JG479_RS17940 PF00684 DnaJ central domain JG479_RS17940 PF00226 DnaJ domain JG479_RS17940 PF01556 DnaJ C terminal domain JG479_RS17945 PF00012 Hsp70 protein JG479_RS17960 PF04403 Paraquat-inducible protein A JG479_RS17965 PF02470 MlaD protein JG479_RS17975 PF03553 Na+/H+ antiporter family JG479_RS17980 PF16187 Middle or third domain of peptidase_M16 JG479_RS17980 PF00675 Insulinase (Peptidase family M16) JG479_RS17980 PF05193 Peptidase M16 inactive domain JG479_RS17990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JG479_RS18000 PF02872 5'-nucleotidase, C-terminal domain JG479_RS18000 PF00149 Calcineurin-like phosphoesterase JG479_RS18020 PF00593 TonB dependent receptor JG479_RS18030 PF01047 MarR family JG479_RS18035 PF04209 homogentisate 1,2-dioxygenase JG479_RS18040 PF14497 Glutathione S-transferase, C-terminal domain JG479_RS18040 PF02798 Glutathione S-transferase, N-terminal domain JG479_RS18055 PF09905 DNA-binding protein VF530 JG479_RS18060 PF02142 MGS-like domain JG479_RS18060 PF00781 Diacylglycerol kinase catalytic domain JG479_RS18065 PF04542 Sigma-70 region 2 JG479_RS18065 PF04545 Sigma-70, region 4 JG479_RS18100 PF02321 Outer membrane efflux protein JG479_RS18105 PF00873 AcrB/AcrD/AcrF family JG479_RS18110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JG479_RS18110 PF00529 HlyD membrane-fusion protein of T1SS JG479_RS18115 PF00571 CBS domain JG479_RS18115 PF01595 Cyclin M transmembrane N-terminal domain JG479_RS18115 PF03471 Transporter associated domain JG479_RS18125 PF00491 Arginase family JG479_RS18130 PF01048 Phosphorylase superfamily JG479_RS18135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JG479_RS18135 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JG479_RS18140 PF00311 Phosphoenolpyruvate carboxylase JG479_RS18160 PF01321 Creatinase/Prolidase N-terminal domain JG479_RS18160 PF00557 Metallopeptidase family M24 JG479_RS18185 PF00072 Response regulator receiver domain JG479_RS18200 PF01979 Amidohydrolase family JG479_RS18205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JG479_RS18205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JG479_RS18210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JG479_RS18215 PF02789 Cytosol aminopeptidase family, N-terminal domain JG479_RS18215 PF00883 Cytosol aminopeptidase family, catalytic domain JG479_RS18235 PF13181 Tetratricopeptide repeat JG479_RS18245 PF05971 RNA methyltransferase JG479_RS18250 PF01212 Beta-eliminating lyase JG479_RS18255 PF00265 Thymidine kinase JG479_RS18265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JG479_RS18265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JG479_RS18270 PF00730 HhH-GPD superfamily base excision DNA repair protein JG479_RS18270 PF12833 Helix-turn-helix domain JG479_RS18270 PF02805 Metal binding domain of Ada JG479_RS18270 PF06029 AlkA N-terminal domain JG479_RS18275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JG479_RS18275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JG479_RS18290 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS18290 PF00672 HAMP domain JG479_RS18290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JG479_RS18290 PF01627 Hpt domain JG479_RS18290 PF00072 Response regulator receiver domain JG479_RS18295 PF01545 Cation efflux family JG479_RS18305 PF07715 TonB-dependent Receptor Plug Domain JG479_RS18305 PF00593 TonB dependent receptor JG479_RS18310 PF00210 Ferritin-like domain JG479_RS18315 PF00210 Ferritin-like domain JG479_RS18320 PF04324 BFD-like [2Fe-2S] binding domain JG479_RS18325 PF01169 Uncharacterized protein family UPF0016 JG479_RS18335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS18335 PF00672 HAMP domain JG479_RS18335 PF12729 Four helix bundle sensory module for signal transduction JG479_RS18345 PF00498 FHA domain JG479_RS18345 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS18345 PF00563 EAL domain JG479_RS18350 PF01545 Cation efflux family JG479_RS18350 PF16916 Dimerisation domain of Zinc Transporter JG479_RS18355 PF00563 EAL domain JG479_RS18355 PF00360 Phytochrome region JG479_RS18355 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS18355 PF01590 GAF domain JG479_RS18360 PF01145 SPFH domain / Band 7 family JG479_RS18375 PF01734 Patatin-like phospholipase JG479_RS18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS18405 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS18405 PF00072 Response regulator receiver domain JG479_RS18405 PF09308 LuxQ, periplasmic JG479_RS18415 PF13192 Thioredoxin domain JG479_RS18415 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS18420 PF00578 AhpC/TSA family JG479_RS18420 PF10417 C-terminal domain of 1-Cys peroxiredoxin JG479_RS18440 PF05199 GMC oxidoreductase JG479_RS18440 PF00732 GMC oxidoreductase JG479_RS18450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JG479_RS18450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JG479_RS18455 PF07729 FCD domain JG479_RS18455 PF00392 Bacterial regulatory proteins, gntR family JG479_RS18460 PF00892 EamA-like transporter family JG479_RS18465 PF07690 Major Facilitator Superfamily JG479_RS18470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JG479_RS18475 PF00593 TonB dependent receptor JG479_RS18475 PF07715 TonB-dependent Receptor Plug Domain JG479_RS18480 PF13181 Tetratricopeptide repeat JG479_RS18510 PF17755 UvrA DNA-binding domain JG479_RS18530 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JG479_RS18530 PF01464 Transglycosylase SLT domain JG479_RS18565 PF01810 LysE type translocator JG479_RS18580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JG479_RS18580 PF00356 Bacterial regulatory proteins, lacI family JG479_RS18600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JG479_RS18600 PF00205 Thiamine pyrophosphate enzyme, central domain JG479_RS18600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JG479_RS18605 PF00849 RNA pseudouridylate synthase JG479_RS18610 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS18610 PF08448 PAS fold JG479_RS18635 PF00690 Cation transporter/ATPase, N-terminus JG479_RS18635 PF00689 Cation transporting ATPase, C-terminus JG479_RS18650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JG479_RS18650 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS18660 PF13416 Bacterial extracellular solute-binding protein JG479_RS18665 PF00528 Binding-protein-dependent transport system inner membrane component JG479_RS18670 PF00005 ABC transporter JG479_RS18675 PF01066 CDP-alcohol phosphatidyltransferase JG479_RS18685 PF00722 Glycosyl hydrolases family 16 JG479_RS18705 PF00356 Bacterial regulatory proteins, lacI family JG479_RS18710 PF00128 Alpha amylase, catalytic domain JG479_RS18715 PF07690 Major Facilitator Superfamily JG479_RS18725 PF00294 pfkB family carbohydrate kinase JG479_RS18745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS18745 PF03466 LysR substrate binding domain JG479_RS18770 PF02554 Carbon starvation protein CstA JG479_RS18775 PF00294 pfkB family carbohydrate kinase JG479_RS18780 PF01232 Mannitol dehydrogenase Rossmann domain JG479_RS18780 PF08125 Mannitol dehydrogenase C-terminal domain JG479_RS18790 PF13419 Haloacid dehalogenase-like hydrolase JG479_RS18795 PF00199 Catalase JG479_RS18795 PF06628 Catalase-related immune-responsive JG479_RS18810 PF00005 ABC transporter JG479_RS18815 PF02743 Cache domain JG479_RS18815 PF00672 HAMP domain JG479_RS18815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS18815 PF06580 Histidine kinase JG479_RS18820 PF04397 LytTr DNA-binding domain JG479_RS18820 PF00072 Response regulator receiver domain JG479_RS18825 PF00892 EamA-like transporter family JG479_RS18830 PF08362 YcdC-like protein, C-terminal region JG479_RS18830 PF00440 Bacterial regulatory proteins, tetR family JG479_RS18835 PF03737 Aldolase/RraA JG479_RS18840 PF01425 Amidase JG479_RS18850 PF01925 Sulfite exporter TauE/SafE JG479_RS18855 PF00266 Aminotransferase class-V JG479_RS18860 PF01546 Peptidase family M20/M25/M40 JG479_RS18860 PF07687 Peptidase dimerisation domain JG479_RS18870 PF06906 Protein of unknown function (DUF1272) JG479_RS18880 PF04349 Periplasmic glucan biosynthesis protein, MdoG JG479_RS18890 PF13302 Acetyltransferase (GNAT) domain JG479_RS18925 PF00939 Sodium:sulfate symporter transmembrane region JG479_RS18935 PF03458 UPF0126 domain JG479_RS18970 PF00860 Permease family JG479_RS18975 PF02608 ABC transporter substrate-binding protein PnrA-like JG479_RS18980 PF02653 Branched-chain amino acid transport system / permease component JG479_RS18985 PF02653 Branched-chain amino acid transport system / permease component JG479_RS18990 PF00005 ABC transporter JG479_RS18995 PF00941 FAD binding domain in molybdopterin dehydrogenase JG479_RS18995 PF03450 CO dehydrogenase flavoprotein C-terminal domain JG479_RS19000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JG479_RS19000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JG479_RS19015 PF00576 HIUase/Transthyretin family JG479_RS19020 PF01979 Amidohydrolase family JG479_RS19035 PF00072 Response regulator receiver domain JG479_RS19035 PF00196 Bacterial regulatory proteins, luxR family JG479_RS19045 PF12792 CSS motif domain associated with EAL JG479_RS19045 PF00563 EAL domain JG479_RS19065 PF09278 MerR, DNA binding JG479_RS19065 PF00376 MerR family regulatory protein JG479_RS19075 PF01694 Rhomboid family JG479_RS19105 PF00672 HAMP domain JG479_RS19105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS19115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JG479_RS19115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JG479_RS19120 PF01022 Bacterial regulatory protein, arsR family JG479_RS19125 PF02566 OsmC-like protein JG479_RS19130 PF01047 MarR family JG479_RS19140 PF04996 Succinylarginine dihydrolase JG479_RS19145 PF05552 Conserved TM helix JG479_RS19145 PF00924 Mechanosensitive ion channel JG479_RS19155 PF00106 short chain dehydrogenase JG479_RS19170 PF01546 Peptidase family M20/M25/M40 JG479_RS19170 PF07687 Peptidase dimerisation domain JG479_RS19175 PF03466 LysR substrate binding domain JG479_RS19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS19180 PF01810 LysE type translocator JG479_RS19190 PF08244 Glycosyl hydrolases family 32 C terminal JG479_RS19190 PF00251 Glycosyl hydrolases family 32 N-terminal domain JG479_RS19195 PF00356 Bacterial regulatory proteins, lacI family JG479_RS19200 PF01306 LacY proton/sugar symporter JG479_RS19205 PF00072 Response regulator receiver domain JG479_RS19210 PF02146 Sir2 family JG479_RS19225 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS19225 PF03707 Bacterial signalling protein N terminal repeat JG479_RS19225 PF00563 EAL domain JG479_RS19230 PF07715 TonB-dependent Receptor Plug Domain JG479_RS19230 PF00593 TonB dependent receptor JG479_RS19240 PF03707 Bacterial signalling protein N terminal repeat JG479_RS19240 PF00990 Diguanylate cyclase, GGDEF domain JG479_RS19240 PF00563 EAL domain JG479_RS19245 PF04191 Phospholipid methyltransferase JG479_RS19270 PF00106 short chain dehydrogenase JG479_RS19275 PF12833 Helix-turn-helix domain JG479_RS19275 PF02311 AraC-like ligand binding domain JG479_RS19280 PF00149 Calcineurin-like phosphoesterase JG479_RS19285 PF00037 4Fe-4S binding domain JG479_RS19290 PF00091 Tubulin/FtsZ family, GTPase domain JG479_RS19290 PF12327 FtsZ family, C-terminal domain JG479_RS19305 PF05491 RuvB C-terminal winged helix domain JG479_RS19305 PF05496 Holliday junction DNA helicase RuvB P-loop domain JG479_RS19305 PF17864 RuvB AAA lid domain JG479_RS19340 PF07510 Protein of unknown function (DUF1524) JG479_RS19405 PF00593 TonB dependent receptor JG479_RS19405 PF07715 TonB-dependent Receptor Plug Domain JG479_RS19420 PF16325 Peptidase family U32 C-terminal domain JG479_RS19420 PF01136 Peptidase family U32 JG479_RS19425 PF00334 Nucleoside diphosphate kinase JG479_RS19430 PF04055 Radical SAM superfamily JG479_RS19445 PF04551 GcpE protein JG479_RS19450 PF13393 Histidyl-tRNA synthetase JG479_RS19450 PF03129 Anticodon binding domain JG479_RS19455 PF09976 Tetratricopeptide repeat-like domain JG479_RS19460 PF13360 PQQ-like domain JG479_RS19465 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JG479_RS19465 PF01926 50S ribosome-binding GTPase JG479_RS19485 PF00875 DNA photolyase JG479_RS19485 PF03441 FAD binding domain of DNA photolyase JG479_RS19490 PF03601 Conserved hypothetical protein 698 JG479_RS19495 PF03466 LysR substrate binding domain JG479_RS19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS19515 PF03466 LysR substrate binding domain JG479_RS19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JG479_RS19575 PF03702 Anhydro-N-acetylmuramic acid kinase JG479_RS19580 PF13302 Acetyltransferase (GNAT) domain JG479_RS19585 PF16884 N-terminal domain of oxidoreductase JG479_RS19585 PF00107 Zinc-binding dehydrogenase JG479_RS19595 PF17200 Single Cache domain 2 JG479_RS19595 PF00672 HAMP domain JG479_RS19595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JG479_RS19605 PF09382 RQC domain JG479_RS19605 PF16124 RecQ zinc-binding JG479_RS19605 PF00570 HRDC domain JG479_RS19605 PF00271 Helicase conserved C-terminal domain JG479_RS19605 PF00270 DEAD/DEAH box helicase JG479_RS19610 PF07992 Pyridine nucleotide-disulphide oxidoreductase JG479_RS19650 PF00145 C-5 cytosine-specific DNA methylase JG479_RS19660 PF13426 PAS domain JG479_RS19660 PF13188 PAS domain JG479_RS19660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS19690 PF00497 Bacterial extracellular solute-binding proteins, family 3 JG479_RS19695 PF12848 ABC transporter JG479_RS19695 PF00005 ABC transporter JG479_RS19700 PF00175 Oxidoreductase NAD-binding domain JG479_RS19700 PF00970 Oxidoreductase FAD-binding domain JG479_RS19715 PF00762 Ferrochelatase JG479_RS19720 PF02954 Bacterial regulatory protein, Fis family JG479_RS19720 PF00072 Response regulator receiver domain JG479_RS19720 PF00158 Sigma-54 interaction domain JG479_RS19725 PF00072 Response regulator receiver domain JG479_RS19725 PF13188 PAS domain JG479_RS19725 PF08448 PAS fold JG479_RS19725 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS19725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS19730 PF00593 TonB dependent receptor JG479_RS19730 PF07715 TonB-dependent Receptor Plug Domain JG479_RS19740 PF12833 Helix-turn-helix domain JG479_RS19745 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JG479_RS19750 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JG479_RS19755 PF13520 Amino acid permease JG479_RS19760 PF00472 RF-1 domain JG479_RS19770 PF00141 Peroxidase JG479_RS19780 PF01048 Phosphorylase superfamily JG479_RS19785 PF01676 Metalloenzyme superfamily JG479_RS19790 PF00485 Phosphoribulokinase / Uridine kinase family JG479_RS19795 PF07662 Na+ dependent nucleoside transporter C-terminus JG479_RS19795 PF07670 Nucleoside recognition JG479_RS19795 PF01773 Na+ dependent nucleoside transporter N-terminus JG479_RS19805 PF00313 'Cold-shock' DNA-binding domain JG479_RS19825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS19825 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS19830 PF00486 Transcriptional regulatory protein, C terminal JG479_RS19830 PF00072 Response regulator receiver domain JG479_RS19850 PF00501 AMP-binding enzyme JG479_RS19860 PF00593 TonB dependent receptor JG479_RS19860 PF07715 TonB-dependent Receptor Plug Domain JG479_RS19875 PF01047 MarR family JG479_RS19880 PF13533 Biotin-lipoyl like JG479_RS19890 PF03594 Benzoate membrane transport protein JG479_RS19915 PF00486 Transcriptional regulatory protein, C terminal JG479_RS19915 PF00072 Response regulator receiver domain JG479_RS19920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JG479_RS19920 PF00512 His Kinase A (phospho-acceptor) domain JG479_RS19920 PF08521 Two-component sensor kinase N-terminal JG479_RS19930 PF13286 Phosphohydrolase-associated domain JG479_RS19930 PF01966 HD domain JG479_RS19940 PF01758 Sodium Bile acid symporter family JG479_RS19945 PF03167 Uracil DNA glycosylase superfamily JG479_RS19970 PF08212 Lipocalin-like domain JG479_RS19975 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JG479_RS20000 PF12320 Type 5 capsule protein repressor C-terminal domain JG479_RS20000 PF00149 Calcineurin-like phosphoesterase