locus-tag class description AM474_RS00015 PF03372 Endonuclease/Exonuclease/phosphatase family AM474_RS00020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS00025 PF03466 LysR substrate binding domain AM474_RS00025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS00035 PF03741 Integral membrane protein TerC family AM474_RS00045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS00045 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS00045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS00050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS00050 PF03466 LysR substrate binding domain AM474_RS00055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS00055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS00055 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS00060 PF02803 Thiolase, C-terminal domain AM474_RS00060 PF00108 Thiolase, N-terminal domain AM474_RS00065 PF00106 short chain dehydrogenase AM474_RS00070 PF00501 AMP-binding enzyme AM474_RS00070 PF13193 AMP-binding enzyme C-terminal domain AM474_RS00075 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS00075 PF12833 Helix-turn-helix domain AM474_RS00080 PF13193 AMP-binding enzyme C-terminal domain AM474_RS00080 PF00501 AMP-binding enzyme AM474_RS00085 PF02308 MgtC family AM474_RS00105 PF00672 HAMP domain AM474_RS00105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS00115 PF00916 Sulfate permease family AM474_RS00115 PF01740 STAS domain AM474_RS00120 PF13649 Methyltransferase domain AM474_RS00140 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS00140 PF01590 GAF domain AM474_RS00140 PF00360 Phytochrome region AM474_RS00140 PF00563 EAL domain AM474_RS00155 PF07828 PA-IL-like protein AM474_RS00165 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS00170 PF02954 Bacterial regulatory protein, Fis family AM474_RS00170 PF00158 Sigma-54 interaction domain AM474_RS00170 PF00072 Response regulator receiver domain AM474_RS00175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS00175 PF00672 HAMP domain AM474_RS00175 PF12729 Four helix bundle sensory module for signal transduction AM474_RS00180 PF00487 Fatty acid desaturase AM474_RS00195 PF01037 Lrp/AsnC ligand binding domain AM474_RS00200 PF00583 Acetyltransferase (GNAT) family AM474_RS00205 PF03301 Tryptophan 2,3-dioxygenase AM474_RS00210 PF02525 Flavodoxin-like fold AM474_RS00230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS00230 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS00230 PF01627 Hpt domain AM474_RS00230 PF00989 PAS fold AM474_RS00230 PF00072 Response regulator receiver domain AM474_RS00230 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS00250 PF00106 short chain dehydrogenase AM474_RS00270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS00270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS00270 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS00275 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS00285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS00285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS00285 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS00295 PF00067 Cytochrome P450 AM474_RS00305 PF00108 Thiolase, N-terminal domain AM474_RS00305 PF02803 Thiolase, C-terminal domain AM474_RS00310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM474_RS00310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM474_RS00315 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS00330 PF13193 AMP-binding enzyme C-terminal domain AM474_RS00330 PF00501 AMP-binding enzyme AM474_RS00345 PF00866 Ring hydroxylating beta subunit AM474_RS00350 PF00355 Rieske [2Fe-2S] domain AM474_RS00350 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM474_RS00355 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS00380 PF05977 Transmembrane secretion effector AM474_RS00385 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS00405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS00405 PF00672 HAMP domain AM474_RS00405 PF12729 Four helix bundle sensory module for signal transduction AM474_RS00415 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS00420 PF14759 Reductase C-terminal AM474_RS00420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS00425 PF07690 Major Facilitator Superfamily AM474_RS00430 PF00355 Rieske [2Fe-2S] domain AM474_RS00430 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM474_RS00435 PF00866 Ring hydroxylating beta subunit AM474_RS00480 PF00067 Cytochrome P450 AM474_RS00485 PF00440 Bacterial regulatory proteins, tetR family AM474_RS00485 PF17938 Tetracyclin repressor-like, C-terminal domain AM474_RS00490 PF13932 GidA associated domain AM474_RS00490 PF01134 Glucose inhibited division protein A AM474_RS00495 PF07690 Major Facilitator Superfamily AM474_RS00505 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS00520 PF14870 Photosynthesis system II assembly factor YCF48 AM474_RS00525 PF07044 Protein of unknown function (DUF1329) AM474_RS00535 PF00106 short chain dehydrogenase AM474_RS00540 PF00255 Glutathione peroxidase AM474_RS00545 PF03466 LysR substrate binding domain AM474_RS00545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS00560 PF07044 Protein of unknown function (DUF1329) AM474_RS00570 PF00171 Aldehyde dehydrogenase family AM474_RS00575 PF05199 GMC oxidoreductase AM474_RS00575 PF00732 GMC oxidoreductase AM474_RS00585 PF00067 Cytochrome P450 AM474_RS00595 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS00595 PF00107 Zinc-binding dehydrogenase AM474_RS00625 PF07044 Protein of unknown function (DUF1329) AM474_RS00640 PF13411 MerR HTH family regulatory protein AM474_RS00645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS00645 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS00645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS00650 PF01039 Carboxyl transferase domain AM474_RS00655 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS00660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM474_RS00660 PF00364 Biotin-requiring enzyme AM474_RS00660 PF02785 Biotin carboxylase C-terminal domain AM474_RS00660 PF00289 Biotin carboxylase, N-terminal domain AM474_RS00665 PF00682 HMGL-like AM474_RS00670 PF01144 Coenzyme A transferase AM474_RS00675 PF01144 Coenzyme A transferase AM474_RS00680 PF02803 Thiolase, C-terminal domain AM474_RS00680 PF00108 Thiolase, N-terminal domain AM474_RS00695 PF02569 Pantoate-beta-alanine ligase AM474_RS00730 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AM474_RS00735 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM474_RS00740 PF00589 Phage integrase family AM474_RS00740 PF14659 Phage integrase, N-terminal SAM-like domain AM474_RS00740 PF13356 Arm DNA-binding domain AM474_RS00750 PF01066 CDP-alcohol phosphatidyltransferase AM474_RS00755 PF01541 GIY-YIG catalytic domain AM474_RS00755 PF08459 UvrC Helix-hairpin-helix N-terminal AM474_RS00755 PF02151 UvrB/uvrC motif AM474_RS00760 PF00196 Bacterial regulatory proteins, luxR family AM474_RS00760 PF00072 Response regulator receiver domain AM474_RS00770 PF01494 FAD binding domain AM474_RS00775 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS00775 PF12833 Helix-turn-helix domain AM474_RS00785 PF00593 TonB dependent receptor AM474_RS00785 PF07715 TonB-dependent Receptor Plug Domain AM474_RS00790 PF00072 Response regulator receiver domain AM474_RS00790 PF00196 Bacterial regulatory proteins, luxR family AM474_RS00795 PF13416 Bacterial extracellular solute-binding protein AM474_RS00805 PF09084 NMT1/THI5 like AM474_RS00815 PF09084 NMT1/THI5 like AM474_RS00820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS00820 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS00820 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS00825 PF00296 Luciferase-like monooxygenase AM474_RS00830 PF09084 NMT1/THI5 like AM474_RS00835 PF00296 Luciferase-like monooxygenase AM474_RS00840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS00840 PF03466 LysR substrate binding domain AM474_RS00845 PF05995 Cysteine dioxygenase type I AM474_RS00860 PF01027 Inhibitor of apoptosis-promoting Bax1 AM474_RS00865 PF02635 DsrE/DsrF-like family AM474_RS00870 PF02635 DsrE/DsrF-like family AM474_RS00875 PF04077 DsrH like protein AM474_RS00880 PF04358 DsrC like protein AM474_RS00885 PF02885 Glycosyl transferase family, helical bundle domain AM474_RS00885 PF00591 Glycosyl transferase family, a/b domain AM474_RS00890 PF13409 Glutathione S-transferase, N-terminal domain AM474_RS00895 PF14824 Sirohaem biosynthesis protein central AM474_RS00895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM474_RS00895 PF10414 Sirohaem synthase dimerisation region AM474_RS00900 PF02403 Seryl-tRNA synthetase N-terminal domain AM474_RS00900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM474_RS00905 PF12002 MgsA AAA+ ATPase C terminal AM474_RS00905 PF16193 AAA C-terminal domain AM474_RS00905 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS00910 PF03548 Outer membrane lipoprotein carrier protein LolA AM474_RS00915 PF09397 Ftsk gamma domain AM474_RS00915 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM474_RS00915 PF01580 FtsK/SpoIIIE family AM474_RS00915 PF17854 FtsK alpha domain AM474_RS00920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS00925 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM474_RS00930 PF04377 Arginine-tRNA-protein transferase, C terminus AM474_RS00930 PF04376 Arginine-tRNA-protein transferase, N terminus AM474_RS00935 PF01176 Translation initiation factor 1A / IF-1 AM474_RS00940 PF07724 AAA domain (Cdc48 subfamily) AM474_RS00940 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS00940 PF17871 AAA lid domain AM474_RS00940 PF02861 Clp amino terminal domain, pathogenicity island component AM474_RS00940 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS00945 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM474_RS00950 PF00313 'Cold-shock' DNA-binding domain AM474_RS00955 PF00180 Isocitrate/isopropylmalate dehydrogenase AM474_RS00960 PF03971 Monomeric isocitrate dehydrogenase AM474_RS00965 PF00293 NUDIX domain AM474_RS00975 PF04356 Protein of unknown function (DUF489) AM474_RS00985 PF08328 Adenylosuccinate lyase C-terminal AM474_RS00985 PF00206 Lyase AM474_RS00990 PF08007 Cupin superfamily protein AM474_RS00995 PF13673 Acetyltransferase (GNAT) domain AM474_RS01015 PF00463 Isocitrate lyase family AM474_RS01030 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM474_RS01035 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM474_RS01040 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM474_RS01040 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM474_RS01050 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM474_RS01050 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM474_RS01055 PF00384 Molybdopterin oxidoreductase AM474_RS01055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM474_RS01055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM474_RS01060 PF00146 NADH dehydrogenase AM474_RS01065 PF12838 4Fe-4S dicluster domain AM474_RS01070 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM474_RS01075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM474_RS01080 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM474_RS01080 PF00361 Proton-conducting membrane transporter AM474_RS01085 PF00361 Proton-conducting membrane transporter AM474_RS01090 PF00361 Proton-conducting membrane transporter AM474_RS01095 PF08241 Methyltransferase domain AM474_RS01100 PF01594 AI-2E family transporter AM474_RS01105 PF17200 Single Cache domain 2 AM474_RS01105 PF00672 HAMP domain AM474_RS01105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS01110 PF03553 Na+/H+ antiporter family AM474_RS01110 PF13726 Na+-H+ antiporter family AM474_RS01115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS01115 PF00672 HAMP domain AM474_RS01125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS01130 PF00072 Response regulator receiver domain AM474_RS01130 PF00486 Transcriptional regulatory protein, C terminal AM474_RS01155 PF17263 Family of unknown function (DUF5329) AM474_RS01170 PF00970 Oxidoreductase FAD-binding domain AM474_RS01170 PF00042 Globin AM474_RS01170 PF00175 Oxidoreductase NAD-binding domain AM474_RS01175 PF02954 Bacterial regulatory protein, Fis family AM474_RS01175 PF00158 Sigma-54 interaction domain AM474_RS01180 PF01242 6-pyruvoyl tetrahydropterin synthase AM474_RS01225 PF08334 Type II secretion system (T2SS), protein G AM474_RS01225 PF07963 Prokaryotic N-terminal methylation motif AM474_RS01230 PF00482 Type II secretion system (T2SS), protein F AM474_RS01235 PF00437 Type II/IV secretion system protein AM474_RS01235 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM474_RS01240 PF01061 ABC-2 type transporter AM474_RS01250 PF00107 Zinc-binding dehydrogenase AM474_RS01250 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS01255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS01255 PF03466 LysR substrate binding domain AM474_RS01260 PF01738 Dienelactone hydrolase family AM474_RS01265 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS01275 PF03527 RHS protein AM474_RS01275 PF05593 RHS Repeat AM474_RS01280 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS01280 PF06715 Gp5 C-terminal repeat (3 copies) AM474_RS01285 PF00072 Response regulator receiver domain AM474_RS01285 PF00486 Transcriptional regulatory protein, C terminal AM474_RS01290 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS01290 PF00672 HAMP domain AM474_RS01290 PF16750 Sensor domain of 2-component histidine kinase AM474_RS01295 PF00593 TonB dependent receptor AM474_RS01295 PF07715 TonB-dependent Receptor Plug Domain AM474_RS01300 PF00756 Putative esterase AM474_RS01305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS01310 PF02082 Transcriptional regulator AM474_RS01315 PF03061 Thioesterase superfamily AM474_RS01325 PF07759 Protein of unknown function (DUF1615) AM474_RS01330 PF12833 Helix-turn-helix domain AM474_RS01345 PF07969 Amidohydrolase family AM474_RS01350 PF03573 outer membrane porin, OprD family AM474_RS01360 PF18648 Tse2 ADP-ribosyltransferase toxins AM474_RS01375 PF12833 Helix-turn-helix domain AM474_RS01375 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS01390 PF07724 AAA domain (Cdc48 subfamily) AM474_RS01390 PF17871 AAA lid domain AM474_RS01390 PF02861 Clp amino terminal domain, pathogenicity island component AM474_RS01390 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS01390 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS01400 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS01405 PF01810 LysE type translocator AM474_RS01410 PF13416 Bacterial extracellular solute-binding protein AM474_RS01425 PF01638 HxlR-like helix-turn-helix AM474_RS01430 PF00384 Molybdopterin oxidoreductase AM474_RS01430 PF01568 Molydopterin dinucleotide binding domain AM474_RS01430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM474_RS01435 PF11953 Domain of unknown function (DUF3470) AM474_RS01435 PF00037 4Fe-4S binding domain AM474_RS01440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS01440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS01445 PF00561 alpha/beta hydrolase fold AM474_RS01450 PF13411 MerR HTH family regulatory protein AM474_RS01495 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS01495 PF02861 Clp amino terminal domain, pathogenicity island component AM474_RS01495 PF07724 AAA domain (Cdc48 subfamily) AM474_RS01495 PF17871 AAA lid domain AM474_RS01495 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS01505 PF13086 AAA domain AM474_RS01505 PF13195 Protein of unknown function (DUF4011) AM474_RS01505 PF13086 AAA domain AM474_RS01505 PF13087 AAA domain AM474_RS01505 PF13087 AAA domain AM474_RS01505 PF13195 Protein of unknown function (DUF4011) AM474_RS01515 PF00872 Transposase, Mutator family AM474_RS01560 PF11867 Domain of unknown function (DUF3387) AM474_RS01560 PF18766 SWI2/SNF2 ATPase AM474_RS01560 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AM474_RS01570 PF13361 UvrD-like helicase C-terminal domain AM474_RS01570 PF00580 UvrD/REP helicase N-terminal domain AM474_RS01580 PF12161 HsdM N-terminal domain AM474_RS01580 PF02384 N-6 DNA Methylase AM474_RS01585 PF02384 N-6 DNA Methylase AM474_RS01595 PF00271 Helicase conserved C-terminal domain AM474_RS01595 PF00270 DEAD/DEAH box helicase AM474_RS01610 PF00216 Bacterial DNA-binding protein AM474_RS01615 PF03147 Ferredoxin-fold anticodon binding domain AM474_RS01615 PF01588 Putative tRNA binding domain AM474_RS01615 PF03483 B3/4 domain AM474_RS01615 PF03484 tRNA synthetase B5 domain AM474_RS01615 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM474_RS01620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM474_RS01620 PF01409 tRNA synthetases class II core domain (F) AM474_RS01625 PF00453 Ribosomal protein L20 AM474_RS01630 PF01632 Ribosomal protein L35 AM474_RS01635 PF00707 Translation initiation factor IF-3, C-terminal domain AM474_RS01635 PF05198 Translation initiation factor IF-3, N-terminal domain AM474_RS01640 PF03129 Anticodon binding domain AM474_RS01640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM474_RS01640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM474_RS01640 PF02824 TGS domain AM474_RS01650 PF00561 alpha/beta hydrolase fold AM474_RS01675 PF00557 Metallopeptidase family M24 AM474_RS01705 PF04851 Type III restriction enzyme, res subunit AM474_RS01715 PF00872 Transposase, Mutator family AM474_RS01740 PF02595 Glycerate kinase family AM474_RS01745 PF05651 Putative sugar diacid recognition AM474_RS01745 PF17853 GGDEF-like domain AM474_RS01745 PF13556 PucR C-terminal helix-turn-helix domain AM474_RS01750 PF01526 Tn3 transposase DDE domain AM474_RS01750 PF13700 Domain of unknown function (DUF4158) AM474_RS01755 PF02796 Helix-turn-helix domain of resolvase AM474_RS01755 PF00239 Resolvase, N terminal domain AM474_RS01760 PF00376 MerR family regulatory protein AM474_RS01760 PF09278 MerR, DNA binding AM474_RS01765 PF02411 MerT mercuric transport protein AM474_RS01770 PF00403 Heavy-metal-associated domain AM474_RS01780 PF00403 Heavy-metal-associated domain AM474_RS01780 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS01780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM474_RS01785 PF13411 MerR HTH family regulatory protein AM474_RS01790 PF05052 MerE protein AM474_RS01795 PF02796 Helix-turn-helix domain of resolvase AM474_RS01795 PF00239 Resolvase, N terminal domain AM474_RS01820 PF01740 STAS domain AM474_RS01820 PF00916 Sulfate permease family AM474_RS01825 PF00582 Universal stress protein family AM474_RS01835 PF06977 SdiA-regulated AM474_RS01850 PF02342 TerD domain AM474_RS01855 PF02342 TerD domain AM474_RS01860 PF03741 Integral membrane protein TerC family AM474_RS01870 PF02342 TerD domain AM474_RS01875 PF02342 TerD domain AM474_RS01890 PF15608 PELOTA RNA binding domain AM474_RS01890 PF11202 Phosphoribosyl transferase (PRTase) AM474_RS01905 PF12791 Anti-sigma factor N-terminus AM474_RS01935 PF02899 Phage integrase, N-terminal SAM-like domain AM474_RS01935 PF00589 Phage integrase family AM474_RS01960 PF03631 Virulence factor BrkB AM474_RS01970 PF09335 SNARE associated Golgi protein AM474_RS01995 PF03974 Ecotin AM474_RS02010 PF03466 LysR substrate binding domain AM474_RS02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS02020 PF03573 outer membrane porin, OprD family AM474_RS02055 PF04261 Dyp-type peroxidase family AM474_RS02065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM474_RS02065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM474_RS02065 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS02075 PF00293 NUDIX domain AM474_RS02080 PF02567 Phenazine biosynthesis-like protein AM474_RS02090 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM474_RS02115 PF12158 Protein of unknown function (DUF3592) AM474_RS02130 PF01266 FAD dependent oxidoreductase AM474_RS02135 PF01226 Formate/nitrite transporter AM474_RS02185 PF13443 Cro/C1-type HTH DNA-binding domain AM474_RS02195 PF01546 Peptidase family M20/M25/M40 AM474_RS02195 PF07687 Peptidase dimerisation domain AM474_RS02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS02200 PF00672 HAMP domain AM474_RS02200 PF02743 Cache domain AM474_RS02265 PF00182 Chitinase class I AM474_RS02410 PF03592 Terminase small subunit AM474_RS02410 PF10668 Phage terminase small subunit AM474_RS02450 PF00889 Elongation factor TS AM474_RS02475 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM474_RS02475 PF01653 NAD-dependent DNA ligase adenylation domain AM474_RS02475 PF00533 BRCA1 C Terminus (BRCT) domain AM474_RS02475 PF03120 NAD-dependent DNA ligase OB-fold domain AM474_RS02475 PF12826 Helix-hairpin-helix motif AM474_RS02490 PF00583 Acetyltransferase (GNAT) family AM474_RS02525 PF00717 Peptidase S24-like AM474_RS02525 PF01381 Helix-turn-helix AM474_RS02550 PF11112 Pyocin activator protein PrtN AM474_RS02585 PF00589 Phage integrase family AM474_RS02590 PF01207 Dihydrouridine synthase (Dus) AM474_RS02595 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM474_RS02605 PF00072 Response regulator receiver domain AM474_RS02615 PF04333 MlaA lipoprotein AM474_RS02625 PF00392 Bacterial regulatory proteins, gntR family AM474_RS02625 PF07702 UTRA domain AM474_RS02635 PF01966 HD domain AM474_RS02645 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM474_RS02645 PF14489 QueF-like protein AM474_RS02660 PF00486 Transcriptional regulatory protein, C terminal AM474_RS02660 PF00072 Response regulator receiver domain AM474_RS02665 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS02665 PF00672 HAMP domain AM474_RS02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS02670 PF01061 ABC-2 type transporter AM474_RS02675 PF00005 ABC transporter AM474_RS02680 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS02680 PF13417 Glutathione S-transferase, N-terminal domain AM474_RS02690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS02690 PF09317 Domain of unknown function (DUF1974) AM474_RS02690 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS02690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS02775 PF13614 AAA domain AM474_RS02810 PF00436 Single-strand binding protein family AM474_RS02815 PF01131 DNA topoisomerase AM474_RS02815 PF01751 Toprim domain AM474_RS02830 PF13411 MerR HTH family regulatory protein AM474_RS02835 PF00403 Heavy-metal-associated domain AM474_RS02840 PF01252 Signal peptidase (SPase) II AM474_RS02885 PF00376 MerR family regulatory protein AM474_RS02885 PF09278 MerR, DNA binding AM474_RS02890 PF02411 MerT mercuric transport protein AM474_RS02895 PF00403 Heavy-metal-associated domain AM474_RS02900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM474_RS02900 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS02900 PF00403 Heavy-metal-associated domain AM474_RS02925 PF06067 Domain of unknown function (DUF932) AM474_RS02980 PF13361 UvrD-like helicase C-terminal domain AM474_RS02980 PF00580 UvrD/REP helicase N-terminal domain AM474_RS03095 PF04002 RadC-like JAB domain AM474_RS03130 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system AM474_RS03145 PF17755 UvrA DNA-binding domain AM474_RS03150 PF06965 Na+/H+ antiporter 1 AM474_RS03150 PF13462 Thioredoxin AM474_RS03155 PF16193 AAA C-terminal domain AM474_RS03155 PF12002 MgsA AAA+ ATPase C terminal AM474_RS03155 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS03160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS03165 PF00756 Putative esterase AM474_RS03180 PF00107 Zinc-binding dehydrogenase AM474_RS03180 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS03185 PF02583 Metal-sensitive transcriptional repressor AM474_RS03210 PF04851 Type III restriction enzyme, res subunit AM474_RS03210 PF17757 UvrB interaction domain AM474_RS03210 PF02151 UvrB/uvrC motif AM474_RS03210 PF00271 Helicase conserved C-terminal domain AM474_RS03210 PF12344 Ultra-violet resistance protein B AM474_RS03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03230 PF03466 LysR substrate binding domain AM474_RS03235 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS03245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03245 PF03466 LysR substrate binding domain AM474_RS03260 PF04261 Dyp-type peroxidase family AM474_RS03265 PF13356 Arm DNA-binding domain AM474_RS03265 PF00589 Phage integrase family AM474_RS03285 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS03285 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS03290 PF13185 GAF domain AM474_RS03295 PF17864 RuvB AAA lid domain AM474_RS03295 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM474_RS03295 PF05491 RuvB C-terminal winged helix domain AM474_RS03300 PF01627 Hpt domain AM474_RS03300 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS03300 PF00672 HAMP domain AM474_RS03300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM474_RS03300 PF00072 Response regulator receiver domain AM474_RS03305 PF01047 MarR family AM474_RS03310 PF00255 Glutathione peroxidase AM474_RS03315 PF01641 SelR domain AM474_RS03320 PF00155 Aminotransferase class I and II AM474_RS03330 PF01435 Peptidase family M48 AM474_RS03335 PF00246 Zinc carboxypeptidase AM474_RS03335 PF18027 Cytosolic carboxypeptidase N-terminal domain AM474_RS03340 PF05724 Thiopurine S-methyltransferase (TPMT) AM474_RS03345 PF00582 Universal stress protein family AM474_RS03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03350 PF03466 LysR substrate binding domain AM474_RS03355 PF07690 Major Facilitator Superfamily AM474_RS03360 PF13533 Biotin-lipoyl like AM474_RS03365 PF02321 Outer membrane efflux protein AM474_RS03370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03370 PF03466 LysR substrate binding domain AM474_RS03375 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM474_RS03380 PF00270 DEAD/DEAH box helicase AM474_RS03380 PF03880 DbpA RNA binding domain AM474_RS03380 PF00271 Helicase conserved C-terminal domain AM474_RS03385 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS03395 PF01474 Class-II DAHP synthetase family AM474_RS03400 PF06224 Winged helix DNA-binding domain AM474_RS03410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03410 PF03466 LysR substrate binding domain AM474_RS03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03420 PF03466 LysR substrate binding domain AM474_RS03425 PF01047 MarR family AM474_RS03430 PF02566 OsmC-like protein AM474_RS03435 PF01132 Elongation factor P (EF-P) OB domain AM474_RS03435 PF09285 Elongation factor P, C-terminal AM474_RS03435 PF08207 Elongation factor P (EF-P) KOW-like domain AM474_RS03450 PF11839 Alanine-zipper, major outer membrane lipoprotein AM474_RS03455 PF17969 L,D-transpeptidase C-terminal domain AM474_RS03455 PF03734 L,D-transpeptidase catalytic domain AM474_RS03465 PF13472 GDSL-like Lipase/Acylhydrolase family AM474_RS03470 PF00005 ABC transporter AM474_RS03480 PF01272 Transcription elongation factor, GreA/GreB, C-term AM474_RS03480 PF03449 Transcription elongation factor, N-terminal AM474_RS03490 PF02834 LigT like Phosphoesterase AM474_RS03495 PF00561 alpha/beta hydrolase fold AM474_RS03500 PF03280 Proteobacterial lipase chaperone protein AM474_RS03505 PF07681 DoxX AM474_RS03510 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS03510 PF01464 Transglycosylase SLT domain AM474_RS03515 PF01026 TatD related DNase AM474_RS03520 PF12729 Four helix bundle sensory module for signal transduction AM474_RS03520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS03520 PF00672 HAMP domain AM474_RS03535 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS03550 PF01841 Transglutaminase-like superfamily AM474_RS03550 PF13559 Domain of unknown function (DUF4129) AM474_RS03550 PF11992 Domain of unknown function (DUF3488) AM474_RS03560 PF17863 AAA lid domain AM474_RS03560 PF07726 ATPase family associated with various cellular activities (AAA) AM474_RS03565 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM474_RS03570 PF03466 LysR substrate binding domain AM474_RS03570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03580 PF03466 LysR substrate binding domain AM474_RS03580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03590 PF00158 Sigma-54 interaction domain AM474_RS03590 PF02954 Bacterial regulatory protein, Fis family AM474_RS03590 PF00072 Response regulator receiver domain AM474_RS03595 PF00072 Response regulator receiver domain AM474_RS03595 PF08448 PAS fold AM474_RS03595 PF13188 PAS domain AM474_RS03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS03595 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS03610 PF00440 Bacterial regulatory proteins, tetR family AM474_RS03610 PF17932 Tetracyclin repressor-like, C-terminal domain AM474_RS03625 PF01039 Carboxyl transferase domain AM474_RS03630 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS03630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS03630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS03635 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS03640 PF00289 Biotin carboxylase, N-terminal domain AM474_RS03640 PF00364 Biotin-requiring enzyme AM474_RS03640 PF02785 Biotin carboxylase C-terminal domain AM474_RS03640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM474_RS03650 PF00501 AMP-binding enzyme AM474_RS03650 PF13193 AMP-binding enzyme C-terminal domain AM474_RS03665 PF08281 Sigma-70, region 4 AM474_RS03665 PF04542 Sigma-70 region 2 AM474_RS03670 PF00392 Bacterial regulatory proteins, gntR family AM474_RS03670 PF00155 Aminotransferase class I and II AM474_RS03680 PF00072 Response regulator receiver domain AM474_RS03680 PF00196 Bacterial regulatory proteins, luxR family AM474_RS03685 PF05736 OprF membrane domain AM474_RS03685 PF00691 OmpA family AM474_RS03700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM474_RS03705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM474_RS03710 PF02570 Precorrin-8X methylmutase AM474_RS03715 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM474_RS03715 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM474_RS03720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM474_RS03725 PF01888 CbiD AM474_RS03730 PF02571 Precorrin-6x reductase CbiJ/CobK AM474_RS03735 PF02659 Putative manganese efflux pump AM474_RS03740 PF00593 TonB dependent receptor AM474_RS03740 PF07715 TonB-dependent Receptor Plug Domain AM474_RS03745 PF00005 ABC transporter AM474_RS03755 PF01032 FecCD transport family AM474_RS03760 PF00753 Metallo-beta-lactamase superfamily AM474_RS03785 PF00672 HAMP domain AM474_RS03785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS03790 PF03466 LysR substrate binding domain AM474_RS03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03795 PF07687 Peptidase dimerisation domain AM474_RS03795 PF01546 Peptidase family M20/M25/M40 AM474_RS03800 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS03805 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS03810 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS03815 PF00005 ABC transporter AM474_RS03840 PF03466 LysR substrate binding domain AM474_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS03845 PF00440 Bacterial regulatory proteins, tetR family AM474_RS03850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS03855 PF07690 Major Facilitator Superfamily AM474_RS03860 PF00561 alpha/beta hydrolase fold AM474_RS03880 PF00860 Permease family AM474_RS03890 PF02225 PA domain AM474_RS03890 PF04389 Peptidase family M28 AM474_RS03895 PF02803 Thiolase, C-terminal domain AM474_RS03895 PF00108 Thiolase, N-terminal domain AM474_RS03905 PF13519 von Willebrand factor type A domain AM474_RS03905 PF17863 AAA lid domain AM474_RS03905 PF07728 AAA domain (dynein-related subfamily) AM474_RS03910 PF00793 DAHP synthetase I family AM474_RS03915 PF02514 CobN/Magnesium Chelatase AM474_RS03920 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM474_RS03920 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM474_RS03935 PF11760 Cobalamin synthesis G N-terminal AM474_RS03935 PF11761 Cobalamin biosynthesis central region AM474_RS03935 PF01890 Cobalamin synthesis G C-terminus AM474_RS03940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM474_RS03945 PF00561 alpha/beta hydrolase fold AM474_RS03950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AM474_RS03950 PF07055 Enoyl reductase FAD binding domain AM474_RS03950 PF12241 Trans-2-enoyl-CoA reductase catalytic region AM474_RS03955 PF00766 Electron transfer flavoprotein FAD-binding domain AM474_RS03955 PF01012 Electron transfer flavoprotein domain AM474_RS03960 PF01012 Electron transfer flavoprotein domain AM474_RS03985 PF00440 Bacterial regulatory proteins, tetR family AM474_RS03990 PF00266 Aminotransferase class-V AM474_RS03995 PF01026 TatD related DNase AM474_RS04005 PF09115 DNA polymerase III, delta subunit, C terminal AM474_RS04010 PF02223 Thymidylate kinase AM474_RS04015 PF02618 YceG-like family AM474_RS04020 PF01063 Amino-transferase class IV AM474_RS04025 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS04025 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS04030 PF00550 Phosphopantetheine attachment site AM474_RS04040 PF00698 Acyl transferase domain AM474_RS04045 PF02504 Fatty acid synthesis protein AM474_RS04050 PF01783 Ribosomal L32p protein family AM474_RS04055 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM474_RS04060 PF02545 Maf-like protein AM474_RS04065 PF06965 Na+/H+ antiporter 1 AM474_RS04065 PF01343 Peptidase family S49 AM474_RS04070 PF13419 Haloacid dehalogenase-like hydrolase AM474_RS04075 PF01479 S4 domain AM474_RS04075 PF00849 RNA pseudouridylate synthase AM474_RS04085 PF00575 S1 RNA binding domain AM474_RS04085 PF10150 Ribonuclease E/G family AM474_RS04085 PF12111 Polyribonucleotide phosphorylase C terminal AM474_RS04090 PF01565 FAD binding domain AM474_RS04090 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM474_RS04095 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM474_RS04100 PF02348 Cytidylyltransferase AM474_RS04105 PF03966 Trm112p-like protein AM474_RS04110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM474_RS04115 PF02472 Biopolymer transport protein ExbD/TolR AM474_RS04120 PF01618 MotA/TolQ/ExbB proton channel family AM474_RS04125 PF03772 Competence protein AM474_RS04125 PF13567 Domain of unknown function (DUF4131) AM474_RS04125 PF00753 Metallo-beta-lactamase superfamily AM474_RS04135 PF12704 MacB-like periplasmic core domain AM474_RS04135 PF02687 FtsX-like permease family AM474_RS04140 PF00005 ABC transporter AM474_RS04145 PF12704 MacB-like periplasmic core domain AM474_RS04145 PF02687 FtsX-like permease family AM474_RS04160 PF03009 Glycerophosphoryl diester phosphodiesterase family AM474_RS04165 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS04165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM474_RS04175 PF02424 ApbE family AM474_RS04180 PF00175 Oxidoreductase NAD-binding domain AM474_RS04180 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS04180 PF00970 Oxidoreductase FAD-binding domain AM474_RS04185 PF02508 Rnf-Nqr subunit, membrane protein AM474_RS04190 PF02508 Rnf-Nqr subunit, membrane protein AM474_RS04195 PF04205 FMN-binding domain AM474_RS04200 PF03116 NQR2, RnfD, RnfE family AM474_RS04205 PF11973 NQRA C-terminal domain AM474_RS04205 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AM474_RS04210 PF00324 Amino acid permease AM474_RS04215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM474_RS04215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM474_RS04220 PF00270 DEAD/DEAH box helicase AM474_RS04220 PF17757 UvrB interaction domain AM474_RS04220 PF02559 CarD-like/TRCF domain AM474_RS04220 PF03461 TRCF domain AM474_RS04220 PF00271 Helicase conserved C-terminal domain AM474_RS04230 PF01048 Phosphorylase superfamily AM474_RS04235 PF00933 Glycosyl hydrolase family 3 N terminal domain AM474_RS04240 PF00440 Bacterial regulatory proteins, tetR family AM474_RS04245 PF00717 Peptidase S24-like AM474_RS04245 PF01726 LexA DNA binding domain AM474_RS04250 PF03846 Cell division inhibitor SulA AM474_RS04265 PF08272 Topoisomerase I zinc-ribbon-like AM474_RS04265 PF01396 Topoisomerase DNA binding C4 zinc finger AM474_RS04265 PF01751 Toprim domain AM474_RS04265 PF01131 DNA topoisomerase AM474_RS04275 PF02803 Thiolase, C-terminal domain AM474_RS04275 PF00108 Thiolase, N-terminal domain AM474_RS04280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM474_RS04280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM474_RS04280 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS04300 PF00582 Universal stress protein family AM474_RS04310 PF16326 ABC transporter C-terminal domain AM474_RS04310 PF00005 ABC transporter AM474_RS04310 PF12848 ABC transporter AM474_RS04315 PF01464 Transglycosylase SLT domain AM474_RS04315 PF14718 Soluble lytic murein transglycosylase L domain AM474_RS04330 PF00781 Diacylglycerol kinase catalytic domain AM474_RS04335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM474_RS04335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM474_RS04340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM474_RS04340 PF01266 FAD dependent oxidoreductase AM474_RS04355 PF03454 MoeA C-terminal region (domain IV) AM474_RS04355 PF03453 MoeA N-terminal region (domain I and II) AM474_RS04355 PF00994 Probable molybdopterin binding domain AM474_RS04360 PF00994 Probable molybdopterin binding domain AM474_RS04365 PF12804 MobA-like NTP transferase domain AM474_RS04390 PF00440 Bacterial regulatory proteins, tetR family AM474_RS04395 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS04405 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM474_RS04405 PF00753 Metallo-beta-lactamase superfamily AM474_RS04410 PF03573 outer membrane porin, OprD family AM474_RS04415 PF00909 Ammonium Transporter Family AM474_RS04435 PF01966 HD domain AM474_RS04445 PF00072 Response regulator receiver domain AM474_RS04445 PF00196 Bacterial regulatory proteins, luxR family AM474_RS04450 PF04320 Protein with unknown function (DUF469) AM474_RS04455 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM474_RS04460 PF10672 S-adenosylmethionine-dependent methyltransferase AM474_RS04460 PF01170 Putative RNA methylase family UPF0020 AM474_RS04460 PF02926 THUMP domain AM474_RS04470 PF04957 Ribosome modulation factor AM474_RS04475 PF01180 Dihydroorotate dehydrogenase AM474_RS04490 PF00561 alpha/beta hydrolase fold AM474_RS04520 PF00534 Glycosyl transferases group 1 AM474_RS04520 PF13439 Glycosyltransferase Family 4 AM474_RS04545 PF03537 Glycoside-hydrolase family GH114 AM474_RS04550 PF05088 Bacterial NAD-glutamate dehydrogenase AM474_RS04560 PF17863 AAA lid domain AM474_RS04560 PF07726 ATPase family associated with various cellular activities (AAA) AM474_RS04565 PF01882 Protein of unknown function DUF58 AM474_RS04595 PF00082 Subtilase family AM474_RS04595 PF03797 Autotransporter beta-domain AM474_RS04600 PF00486 Transcriptional regulatory protein, C terminal AM474_RS04600 PF00072 Response regulator receiver domain AM474_RS04605 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS04605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS04620 PF07044 Protein of unknown function (DUF1329) AM474_RS04635 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM474_RS04635 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM474_RS04635 PF01433 Peptidase family M1 domain AM474_RS04645 PF07023 Protein of unknown function (DUF1315) AM474_RS04650 PF01694 Rhomboid family AM474_RS04650 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM474_RS04655 PF00149 Calcineurin-like phosphoesterase AM474_RS04660 PF01513 ATP-NAD kinase AM474_RS04680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS04690 PF12833 Helix-turn-helix domain AM474_RS04690 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS04710 PF04612 Type II secretion system (T2SS), protein M AM474_RS04715 PF12693 GspL periplasmic domain AM474_RS04715 PF05134 Type II secretion system (T2SS), protein L AM474_RS04720 PF03934 Type II secretion system (T2SS), protein K AM474_RS04725 PF11612 Type II secretion system (T2SS), protein J AM474_RS04725 PF07963 Prokaryotic N-terminal methylation motif AM474_RS04730 PF02501 Type II secretion system (T2SS), protein I AM474_RS04730 PF07963 Prokaryotic N-terminal methylation motif AM474_RS04735 PF07963 Prokaryotic N-terminal methylation motif AM474_RS04735 PF12019 Type II transport protein GspH AM474_RS04740 PF07963 Prokaryotic N-terminal methylation motif AM474_RS04740 PF08334 Type II secretion system (T2SS), protein G AM474_RS04745 PF00482 Type II secretion system (T2SS), protein F AM474_RS04750 PF00437 Type II/IV secretion system protein AM474_RS04755 PF11356 Type II secretion system protein C AM474_RS04760 PF03958 Bacterial type II/III secretion system short domain AM474_RS04760 PF00263 Bacterial type II and III secretion system protein AM474_RS04770 PF01053 Cys/Met metabolism PLP-dependent enzyme AM474_RS04775 PF00156 Phosphoribosyl transferase domain AM474_RS04780 PF02674 Colicin V production protein AM474_RS04785 PF05036 Sporulation related domain AM474_RS04790 PF08245 Mur ligase middle domain AM474_RS04790 PF02875 Mur ligase family, glutamate ligase domain AM474_RS04795 PF01039 Carboxyl transferase domain AM474_RS04795 PF17848 Acetyl-coA carboxylase zinc finger domain AM474_RS04800 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM474_RS04805 PF01416 tRNA pseudouridine synthase AM474_RS04815 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM474_RS04815 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM474_RS04820 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM474_RS04820 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM474_RS04825 PF00180 Isocitrate/isopropylmalate dehydrogenase AM474_RS04830 PF08241 Methyltransferase domain AM474_RS04835 PF00694 Aconitase C-terminal domain AM474_RS04840 PF00330 Aconitase family (aconitate hydratase) AM474_RS04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS04850 PF01042 Endoribonuclease L-PSP AM474_RS04855 PF03466 LysR substrate binding domain AM474_RS04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS04865 PF00011 Hsp20/alpha crystallin family AM474_RS04870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS04880 PF01207 Dihydrouridine synthase (Dus) AM474_RS04890 PF01081 KDPG and KHG aldolase AM474_RS04895 PF00561 alpha/beta hydrolase fold AM474_RS04925 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM474_RS04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS04930 PF03466 LysR substrate binding domain AM474_RS04935 PF13533 Biotin-lipoyl like AM474_RS04940 PF07690 Major Facilitator Superfamily AM474_RS04945 PF17757 UvrB interaction domain AM474_RS04945 PF00271 Helicase conserved C-terminal domain AM474_RS04945 PF04851 Type III restriction enzyme, res subunit AM474_RS04945 PF02151 UvrB/uvrC motif AM474_RS04945 PF12344 Ultra-violet resistance protein B AM474_RS04950 PF00155 Aminotransferase class I and II AM474_RS04965 PF02719 Polysaccharide biosynthesis protein AM474_RS04970 PF00953 Glycosyl transferase family 4 AM474_RS04975 PF01370 NAD dependent epimerase/dehydratase family AM474_RS04980 PF13579 Glycosyl transferase 4-like domain AM474_RS04985 PF02350 UDP-N-acetylglucosamine 2-epimerase AM474_RS04990 PF01370 NAD dependent epimerase/dehydratase family AM474_RS04995 PF08485 Polysaccharide biosynthesis protein C-terminal AM474_RS04995 PF02719 Polysaccharide biosynthesis protein AM474_RS05005 PF00535 Glycosyl transferase family 2 AM474_RS05005 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AM474_RS05035 PF00216 Bacterial DNA-binding protein AM474_RS05040 PF00575 S1 RNA binding domain AM474_RS05045 PF02224 Cytidylate kinase AM474_RS05050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM474_RS05055 PF00155 Aminotransferase class I and II AM474_RS05060 PF01842 ACT domain AM474_RS05060 PF01817 Chorismate mutase type II AM474_RS05060 PF00800 Prephenate dehydratase AM474_RS05065 PF00266 Aminotransferase class-V AM474_RS05070 PF00521 DNA gyrase/topoisomerase IV, subunit A AM474_RS05070 PF03989 DNA gyrase C-terminal domain, beta-propeller AM474_RS05075 PF01008 Initiation factor 2 subunit family AM474_RS05080 PF01979 Amidohydrolase family AM474_RS05090 PF13419 Haloacid dehalogenase-like hydrolase AM474_RS05095 PF00106 short chain dehydrogenase AM474_RS05105 PF00491 Arginase family AM474_RS05110 PF03616 Sodium/glutamate symporter AM474_RS05115 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS05130 PF01479 S4 domain AM474_RS05130 PF00849 RNA pseudouridylate synthase AM474_RS05140 PF01081 KDPG and KHG aldolase AM474_RS05145 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM474_RS05150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM474_RS05150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM474_RS05155 PF01418 Helix-turn-helix domain, rpiR family AM474_RS05155 PF01380 SIS domain AM474_RS05160 PF01263 Aldose 1-epimerase AM474_RS05170 PF04966 Carbohydrate-selective porin, OprB family AM474_RS05175 PF00005 ABC transporter AM474_RS05175 PF17912 MalK OB fold domain AM474_RS05180 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS05185 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS05190 PF01547 Bacterial extracellular solute-binding protein AM474_RS05200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS05200 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS05200 PF00672 HAMP domain AM474_RS05205 PF00486 Transcriptional regulatory protein, C terminal AM474_RS05205 PF00072 Response regulator receiver domain AM474_RS05210 PF02685 Glucokinase AM474_RS05215 PF00920 Dehydratase family AM474_RS05220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM474_RS05220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM474_RS05235 PF04079 Segregation and condensation complex subunit ScpB AM474_RS05240 PF02616 Segregation and condensation protein ScpA AM474_RS05245 PF01300 Telomere recombination AM474_RS05250 PF02811 PHP domain AM474_RS05255 PF04279 Intracellular septation protein A AM474_RS05260 PF03795 YCII-related domain AM474_RS05270 PF00072 Response regulator receiver domain AM474_RS05270 PF00486 Transcriptional regulatory protein, C terminal AM474_RS05280 PF00672 HAMP domain AM474_RS05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS05280 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS05280 PF16750 Sensor domain of 2-component histidine kinase AM474_RS05290 PF00881 Nitroreductase family AM474_RS05295 PF03692 Putative zinc- or iron-chelating domain AM474_RS05300 PF02386 Cation transport protein AM474_RS05305 PF02405 Permease MlaE AM474_RS05310 PF00005 ABC transporter AM474_RS05325 PF12833 Helix-turn-helix domain AM474_RS05325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS05335 PF00211 Adenylate and Guanylate cyclase catalytic domain AM474_RS05340 PF13439 Glycosyltransferase Family 4 AM474_RS05340 PF00534 Glycosyl transferases group 1 AM474_RS05350 PF12833 Helix-turn-helix domain AM474_RS05355 PF01588 Putative tRNA binding domain AM474_RS05365 PF03466 LysR substrate binding domain AM474_RS05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS05370 PF03358 NADPH-dependent FMN reductase AM474_RS05375 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS05375 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS05380 PF01370 NAD dependent epimerase/dehydratase family AM474_RS05385 PF01597 Glycine cleavage H-protein AM474_RS05395 PF02525 Flavodoxin-like fold AM474_RS05410 PF00561 alpha/beta hydrolase fold AM474_RS05415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM474_RS05420 PF00664 ABC transporter transmembrane region AM474_RS05420 PF00005 ABC transporter AM474_RS05450 PF00474 Sodium:solute symporter family AM474_RS05455 PF04341 Protein of unknown function, DUF485 AM474_RS05460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM474_RS05475 PF04333 MlaA lipoprotein AM474_RS05480 PF05726 Pirin C-terminal cupin domain AM474_RS05480 PF02678 Pirin AM474_RS05490 PF03279 Bacterial lipid A biosynthesis acyltransferase AM474_RS05495 PF03775 Septum formation inhibitor MinC, C-terminal domain AM474_RS05495 PF05209 Septum formation inhibitor MinC, N-terminal domain AM474_RS05500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM474_RS05505 PF03776 Septum formation topological specificity factor MinE AM474_RS05510 PF00849 RNA pseudouridylate synthase AM474_RS05515 PF02127 Aminopeptidase I zinc metalloprotease (M18) AM474_RS05525 PF00392 Bacterial regulatory proteins, gntR family AM474_RS05525 PF07702 UTRA domain AM474_RS05540 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS05550 PF08402 TOBE domain AM474_RS05550 PF00005 ABC transporter AM474_RS05555 PF18429 Domain of unknown function (DUF5609) AM474_RS05560 PF00698 Acyl transferase domain AM474_RS05560 PF00550 Phosphopantetheine attachment site AM474_RS05560 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS05560 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS05560 PF08659 KR domain AM474_RS05560 PF16197 Ketoacyl-synthetase C-terminal extension AM474_RS05560 PF14765 Polyketide synthase dehydratase AM474_RS05560 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS05565 PF00595 PDZ domain AM474_RS05565 PF03572 Peptidase family S41 AM474_RS05565 PF17804 Tail specific protease N-terminal domain AM474_RS05565 PF11818 C-terminal domain of tail specific protease (DUF3340) AM474_RS05570 PF00563 EAL domain AM474_RS05570 PF17153 Periplasmic sensor domain, extracellular AM474_RS05600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM474_RS05600 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM474_RS05615 PF04381 Putative exonuclease, RdgC AM474_RS05620 PF01758 Sodium Bile acid symporter family AM474_RS05625 PF00893 Small Multidrug Resistance protein AM474_RS05630 PF00313 'Cold-shock' DNA-binding domain AM474_RS05635 PF07690 Major Facilitator Superfamily AM474_RS05640 PF07715 TonB-dependent Receptor Plug Domain AM474_RS05640 PF07660 Secretin and TonB N terminus short domain AM474_RS05640 PF00593 TonB dependent receptor AM474_RS05645 PF12833 Helix-turn-helix domain AM474_RS05645 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS05655 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS05660 PF08494 DEAD/H associated AM474_RS05660 PF00271 Helicase conserved C-terminal domain AM474_RS05660 PF00270 DEAD/DEAH box helicase AM474_RS05675 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM474_RS05685 PF00561 alpha/beta hydrolase fold AM474_RS05685 PF00106 short chain dehydrogenase AM474_RS05695 PF07396 Phosphate-selective porin O and P AM474_RS05705 PF07396 Phosphate-selective porin O and P AM474_RS05720 PF05114 Protein of unknown function (DUF692) AM474_RS05735 PF08281 Sigma-70, region 4 AM474_RS05735 PF04542 Sigma-70 region 2 AM474_RS05740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM474_RS05740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM474_RS05745 PF00023 Ankyrin repeat AM474_RS05745 PF12796 Ankyrin repeats (3 copies) AM474_RS05785 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS05790 PF01230 HIT domain AM474_RS05795 PF00245 Alkaline phosphatase AM474_RS05800 PF04408 Helicase associated domain (HA2) AM474_RS05800 PF00271 Helicase conserved C-terminal domain AM474_RS05800 PF11898 Domain of unknown function (DUF3418) AM474_RS05800 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM474_RS05800 PF00270 DEAD/DEAH box helicase AM474_RS05815 PF13193 AMP-binding enzyme C-terminal domain AM474_RS05815 PF00501 AMP-binding enzyme AM474_RS05820 PF13193 AMP-binding enzyme C-terminal domain AM474_RS05820 PF00501 AMP-binding enzyme AM474_RS05825 PF12146 Serine aminopeptidase, S33 AM474_RS05830 PF01575 MaoC like domain AM474_RS05835 PF07690 Major Facilitator Superfamily AM474_RS05840 PF13533 Biotin-lipoyl like AM474_RS05865 PF12137 RNA polymerase recycling family C-terminal AM474_RS05865 PF00176 SNF2 family N-terminal domain AM474_RS05865 PF00271 Helicase conserved C-terminal domain AM474_RS05865 PF18337 RapA N-terminal Tudor like domain AM474_RS05865 PF18339 RapA N-terminal Tudor like domain 1 AM474_RS05875 PF00582 Universal stress protein family AM474_RS05880 PF00884 Sulfatase AM474_RS05880 PF08019 Phosphoethanolamine transferase EptA/EptB AM474_RS05885 PF03707 Bacterial signalling protein N terminal repeat AM474_RS05885 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS05885 PF00563 EAL domain AM474_RS05890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM474_RS05890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM474_RS05900 PF00005 ABC transporter AM474_RS05905 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS05910 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS05925 PF05506 Domain of unknown function (DUF756) AM474_RS05925 PF04185 Phosphoesterase family AM474_RS05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS05940 PF03466 LysR substrate binding domain AM474_RS05955 PF00561 alpha/beta hydrolase fold AM474_RS05955 PF00106 short chain dehydrogenase AM474_RS05965 PF00574 Clp protease AM474_RS05970 PF13193 AMP-binding enzyme C-terminal domain AM474_RS05970 PF00975 Thioesterase domain AM474_RS05970 PF00501 AMP-binding enzyme AM474_RS05970 PF00668 Condensation domain AM474_RS05970 PF00550 Phosphopantetheine attachment site AM474_RS05975 PF01494 FAD binding domain AM474_RS05985 PF00106 short chain dehydrogenase AM474_RS05990 PF00067 Cytochrome P450 AM474_RS05995 PF12680 SnoaL-like domain AM474_RS06000 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM474_RS06000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM474_RS06015 PF07690 Major Facilitator Superfamily AM474_RS06020 PF01370 NAD dependent epimerase/dehydratase family AM474_RS06030 PF01734 Patatin-like phospholipase AM474_RS06055 PF01590 GAF domain AM474_RS06055 PF00563 EAL domain AM474_RS06055 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS06055 PF00360 Phytochrome region AM474_RS06060 PF00271 Helicase conserved C-terminal domain AM474_RS06060 PF00270 DEAD/DEAH box helicase AM474_RS06060 PF09382 RQC domain AM474_RS06060 PF16124 RecQ zinc-binding AM474_RS06060 PF00570 HRDC domain AM474_RS06070 PF00486 Transcriptional regulatory protein, C terminal AM474_RS06070 PF00072 Response regulator receiver domain AM474_RS06075 PF13466 STAS domain AM474_RS06080 PF03705 CheR methyltransferase, all-alpha domain AM474_RS06080 PF01739 CheR methyltransferase, SAM binding domain AM474_RS06085 PF00072 Response regulator receiver domain AM474_RS06085 PF01584 CheW-like domain AM474_RS06105 PF07238 PilZ domain AM474_RS06105 PF07317 Flagellar regulator YcgR AM474_RS06115 PF07690 Major Facilitator Superfamily AM474_RS06120 PF00120 Glutamine synthetase, catalytic domain AM474_RS06125 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS06130 PF00892 EamA-like transporter family AM474_RS06140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS06140 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS06155 PF03861 ANTAR domain AM474_RS06165 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS06165 PF07724 AAA domain (Cdc48 subfamily) AM474_RS06170 PF00795 Carbon-nitrogen hydrolase AM474_RS06235 PF12706 Beta-lactamase superfamily domain AM474_RS06245 PF07969 Amidohydrolase family AM474_RS06250 PF00005 ABC transporter AM474_RS06255 PF00005 ABC transporter AM474_RS06260 PF06007 Phosphonate metabolism protein PhnJ AM474_RS06265 PF05861 Bacterial phosphonate metabolism protein (PhnI) AM474_RS06275 PF06754 Phosphonate metabolism protein PhnG AM474_RS06280 PF07702 UTRA domain AM474_RS06280 PF00392 Bacterial regulatory proteins, gntR family AM474_RS06285 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS06295 PF00005 ABC transporter AM474_RS06300 PF03869 Arc-like DNA binding domain AM474_RS06315 PF18389 TrmO C-terminal domain AM474_RS06315 PF01980 tRNA-methyltransferase O AM474_RS06330 PF12801 4Fe-4S binding domain AM474_RS06330 PF04205 FMN-binding domain AM474_RS06335 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM474_RS06335 PF18764 Nitrous oxide reductase propeller repeat AM474_RS06335 PF18793 Nitrous oxide reductase propeller repeat 2 AM474_RS06340 PF05048 Periplasmic copper-binding protein (NosD) AM474_RS06345 PF00005 ABC transporter AM474_RS06350 PF12679 ABC-2 family transporter protein AM474_RS06355 PF05573 NosL AM474_RS06360 PF00175 Oxidoreductase NAD-binding domain AM474_RS06360 PF00970 Oxidoreductase FAD-binding domain AM474_RS06365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS06365 PF03466 LysR substrate binding domain AM474_RS06415 PF02321 Outer membrane efflux protein AM474_RS06420 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS06425 PF00005 ABC transporter AM474_RS06425 PF00664 ABC transporter transmembrane region AM474_RS06430 PF06438 Heme-binding protein A (HasA) AM474_RS06435 PF07715 TonB-dependent Receptor Plug Domain AM474_RS06435 PF00593 TonB dependent receptor AM474_RS06475 PF02817 e3 binding domain AM474_RS06475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM474_RS06475 PF00364 Biotin-requiring enzyme AM474_RS06480 PF02780 Transketolase, C-terminal domain AM474_RS06480 PF02779 Transketolase, pyrimidine binding domain AM474_RS06485 PF00676 Dehydrogenase E1 component AM474_RS06490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM474_RS06490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM474_RS06495 PF13369 Transglutaminase-like superfamily AM474_RS06500 PF00196 Bacterial regulatory proteins, luxR family AM474_RS06505 PF07044 Protein of unknown function (DUF1329) AM474_RS06520 PF01593 Flavin containing amine oxidoreductase AM474_RS06530 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS06535 PF00106 short chain dehydrogenase AM474_RS06545 PF12697 Alpha/beta hydrolase family AM474_RS06550 PF00596 Class II Aldolase and Adducin N-terminal domain AM474_RS06555 PF04172 LrgB-like family AM474_RS06560 PF03788 LrgA family AM474_RS06565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS06565 PF03466 LysR substrate binding domain AM474_RS06570 PF00258 Flavodoxin AM474_RS06585 PF01227 GTP cyclohydrolase I AM474_RS06590 PF02152 Dihydroneopterin aldolase AM474_RS06605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS06605 PF03459 TOBE domain AM474_RS06610 PF00005 ABC transporter AM474_RS06615 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS06620 PF00296 Luciferase-like monooxygenase AM474_RS06625 PF09084 NMT1/THI5 like AM474_RS06630 PF03358 NADPH-dependent FMN reductase AM474_RS06635 PF00005 ABC transporter AM474_RS06640 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS06645 PF09084 NMT1/THI5 like AM474_RS06650 PF00578 AhpC/TSA family AM474_RS06650 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM474_RS06660 PF06039 Malate:quinone oxidoreductase (Mqo) AM474_RS06665 PF04337 Protein of unknown function, DUF480 AM474_RS06670 PF02803 Thiolase, C-terminal domain AM474_RS06670 PF00108 Thiolase, N-terminal domain AM474_RS06675 PF03976 Polyphosphate kinase 2 (PPK2) AM474_RS06685 PF01266 FAD dependent oxidoreductase AM474_RS06685 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS06690 PF01925 Sulfite exporter TauE/SafE AM474_RS06700 PF00733 Asparagine synthase AM474_RS06700 PF13537 Glutamine amidotransferase domain AM474_RS06705 PF02875 Mur ligase family, glutamate ligase domain AM474_RS06705 PF08245 Mur ligase middle domain AM474_RS06705 PF08443 RimK-like ATP-grasp domain AM474_RS06710 PF05343 M42 glutamyl aminopeptidase AM474_RS06715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM474_RS06715 PF00672 HAMP domain AM474_RS06715 PF01627 Hpt domain AM474_RS06715 PF00072 Response regulator receiver domain AM474_RS06715 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS06720 PF06794 Uncharacterised protein family (UPF0270) AM474_RS06735 PF00270 DEAD/DEAH box helicase AM474_RS06735 PF00271 Helicase conserved C-terminal domain AM474_RS06740 PF07690 Major Facilitator Superfamily AM474_RS06745 PF00924 Mechanosensitive ion channel AM474_RS06750 PF01872 RibD C-terminal domain AM474_RS06760 PF03949 Malic enzyme, NAD binding domain AM474_RS06760 PF00390 Malic enzyme, N-terminal domain AM474_RS06770 PF00877 NlpC/P60 family AM474_RS06780 PF00892 EamA-like transporter family AM474_RS06785 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS06790 PF00765 Autoinducer synthase AM474_RS06795 PF03472 Autoinducer binding domain AM474_RS06795 PF00196 Bacterial regulatory proteins, luxR family AM474_RS06805 PF00561 alpha/beta hydrolase fold AM474_RS06815 PF00692 dUTPase AM474_RS06820 PF10609 NUBPL iron-transfer P-loop NTPase AM474_RS06825 PF09334 tRNA synthetases class I (M) AM474_RS06825 PF01588 Putative tRNA binding domain AM474_RS06845 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS06860 PF02508 Rnf-Nqr subunit, membrane protein AM474_RS06865 PF04060 Putative Fe-S cluster AM474_RS06870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM474_RS06870 PF12838 4Fe-4S dicluster domain AM474_RS06870 PF13375 RnfC Barrel sandwich hybrid domain AM474_RS06870 PF10531 SLBB domain AM474_RS06875 PF03116 NQR2, RnfD, RnfE family AM474_RS06880 PF04205 FMN-binding domain AM474_RS06885 PF02508 Rnf-Nqr subunit, membrane protein AM474_RS06890 PF10576 Iron-sulfur binding domain of endonuclease III AM474_RS06890 PF00633 Helix-hairpin-helix motif AM474_RS06890 PF00730 HhH-GPD superfamily base excision DNA repair protein AM474_RS06905 PF00206 Lyase AM474_RS06905 PF10397 Adenylosuccinate lyase C-terminus AM474_RS06910 PF00206 Lyase AM474_RS06910 PF10397 Adenylosuccinate lyase C-terminus AM474_RS06930 PF02321 Outer membrane efflux protein AM474_RS06935 PF00873 AcrB/AcrD/AcrF family AM474_RS06940 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS06940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS06945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS06950 PF00764 Arginosuccinate synthase AM474_RS06960 PF01979 Amidohydrolase family AM474_RS06965 PF00929 Exonuclease AM474_RS06970 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM474_RS06970 PF00578 AhpC/TSA family AM474_RS06975 PF04324 BFD-like [2Fe-2S] binding domain AM474_RS06980 PF00210 Ferritin-like domain AM474_RS06985 PF07690 Major Facilitator Superfamily AM474_RS06990 PF00462 Glutaredoxin AM474_RS06995 PF00384 Molybdopterin oxidoreductase AM474_RS06995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM474_RS06995 PF01568 Molydopterin dinucleotide binding domain AM474_RS07000 PF03797 Autotransporter beta-domain AM474_RS07000 PF12951 Passenger-associated-transport-repeat AM474_RS07000 PF00082 Subtilase family AM474_RS07010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM474_RS07010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM474_RS07015 PF08402 TOBE domain AM474_RS07015 PF00005 ABC transporter AM474_RS07020 PF03883 Peroxide stress protein YaaA AM474_RS07025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM474_RS07025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM474_RS07025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM474_RS07035 PF07238 PilZ domain AM474_RS07045 PF13372 Alginate export AM474_RS07050 PF05048 Periplasmic copper-binding protein (NosD) AM474_RS07055 PF16824 C-terminal carbohydrate-binding module AM474_RS07055 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX AM474_RS07060 PF05426 Alginate lyase AM474_RS07070 PF03062 MBOAT, membrane-bound O-acyltransferase family AM474_RS07075 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX AM474_RS07080 PF11182 Alginate O-acetyl transferase AlgF AM474_RS07085 PF01050 Mannose-6-phosphate isomerase AM474_RS07085 PF00483 Nucleotidyl transferase AM474_RS07090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM474_RS07095 PF00535 Glycosyl transferase family 2 AM474_RS07100 PF01370 NAD dependent epimerase/dehydratase family AM474_RS07100 PF02911 Formyl transferase, C-terminal domain AM474_RS07100 PF00551 Formyl transferase AM474_RS07105 PF01522 Polysaccharide deacetylase AM474_RS07110 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM474_RS07115 PF00892 EamA-like transporter family AM474_RS07120 PF00893 Small Multidrug Resistance protein AM474_RS07125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM474_RS07125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM474_RS07125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM474_RS07130 PF02378 Phosphotransferase system, EIIC AM474_RS07130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM474_RS07135 PF00294 pfkB family carbohydrate kinase AM474_RS07140 PF00381 PTS HPr component phosphorylation site AM474_RS07140 PF05524 PEP-utilising enzyme, N-terminal AM474_RS07140 PF00391 PEP-utilising enzyme, mobile domain AM474_RS07140 PF02896 PEP-utilising enzyme, TIM barrel domain AM474_RS07140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM474_RS07145 PF00356 Bacterial regulatory proteins, lacI family AM474_RS07145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM474_RS07150 PF01026 TatD related DNase AM474_RS07160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS07160 PF03466 LysR substrate binding domain AM474_RS07170 PF00107 Zinc-binding dehydrogenase AM474_RS07170 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS07175 PF13193 AMP-binding enzyme C-terminal domain AM474_RS07175 PF00501 AMP-binding enzyme AM474_RS07175 PF16177 Acetyl-coenzyme A synthetase N-terminus AM474_RS07180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM474_RS07180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM474_RS07185 PF00171 Aldehyde dehydrogenase family AM474_RS07190 PF12833 Helix-turn-helix domain AM474_RS07190 PF02311 AraC-like ligand binding domain AM474_RS07200 PF07690 Major Facilitator Superfamily AM474_RS07205 PF00440 Bacterial regulatory proteins, tetR family AM474_RS07205 PF08361 MAATS-type transcriptional repressor, C-terminal region AM474_RS07235 PF02567 Phenazine biosynthesis-like protein AM474_RS07240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM474_RS07240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM474_RS07245 PF04073 Aminoacyl-tRNA editing domain AM474_RS07250 PF00230 Major intrinsic protein AM474_RS07255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM474_RS07255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM474_RS07265 PF08220 DeoR-like helix-turn-helix domain AM474_RS07265 PF00455 DeoR C terminal sensor domain AM474_RS07270 PF01266 FAD dependent oxidoreductase AM474_RS07270 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM474_RS07275 PF06942 GlpM protein AM474_RS07280 PF00561 alpha/beta hydrolase fold AM474_RS07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS07285 PF03466 LysR substrate binding domain AM474_RS07290 PF03573 outer membrane porin, OprD family AM474_RS07295 PF02803 Thiolase, C-terminal domain AM474_RS07295 PF00108 Thiolase, N-terminal domain AM474_RS07300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM474_RS07300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM474_RS07300 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM474_RS07305 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS07310 PF02515 CoA-transferase family III AM474_RS07315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS07315 PF18158 Adaptive response protein AidB N-terminal domain AM474_RS07315 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS07320 PF03466 LysR substrate binding domain AM474_RS07320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS07330 PF00083 Sugar (and other) transporter AM474_RS07330 PF07690 Major Facilitator Superfamily AM474_RS07335 PF12833 Helix-turn-helix domain AM474_RS07335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM474_RS07335 PF02805 Metal binding domain of Ada AM474_RS07335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM474_RS07340 PF00324 Amino acid permease AM474_RS07345 PF00795 Carbon-nitrogen hydrolase AM474_RS07355 PF00444 Ribosomal protein L36 AM474_RS07360 PF01197 Ribosomal protein L31 AM474_RS07365 PF01645 Conserved region in glutamate synthase AM474_RS07370 PF01219 Prokaryotic diacylglycerol kinase AM474_RS07375 PF00196 Bacterial regulatory proteins, luxR family AM474_RS07375 PF00072 Response regulator receiver domain AM474_RS07385 PF03942 DTW domain AM474_RS07390 PF00005 ABC transporter AM474_RS07390 PF08402 TOBE domain AM474_RS07395 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS07400 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS07405 PF13416 Bacterial extracellular solute-binding protein AM474_RS07415 PF12843 Putative quorum-sensing-regulated virulence factor AM474_RS07420 PF09364 XFP N-terminal domain AM474_RS07420 PF09363 XFP C-terminal domain AM474_RS07420 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AM474_RS07425 PF10996 Beta-Casp domain AM474_RS07425 PF00753 Metallo-beta-lactamase superfamily AM474_RS07425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AM474_RS07435 PF02631 RecX family AM474_RS07440 PF00154 recA bacterial DNA recombination protein AM474_RS07445 PF02464 Competence-damaged protein AM474_RS07460 PF00488 MutS domain V AM474_RS07460 PF05192 MutS domain III AM474_RS07460 PF01624 MutS domain I AM474_RS07460 PF05190 MutS family domain IV AM474_RS07460 PF05188 MutS domain II AM474_RS07465 PF00037 4Fe-4S binding domain AM474_RS07465 PF11953 Domain of unknown function (DUF3470) AM474_RS07470 PF04542 Sigma-70 region 2 AM474_RS07470 PF04545 Sigma-70, region 4 AM474_RS07470 PF04539 Sigma-70 region 3 AM474_RS07470 PF00140 Sigma-70 factor, region 1.2 AM474_RS07475 PF01476 LysM domain AM474_RS07475 PF01551 Peptidase family M23 AM474_RS07485 PF01975 Survival protein SurE AM474_RS07490 PF01142 tRNA pseudouridine synthase D (TruD) AM474_RS07495 PF02542 YgbB family AM474_RS07500 PF00756 Putative esterase AM474_RS07505 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS07505 PF00107 Zinc-binding dehydrogenase AM474_RS07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS07510 PF03466 LysR substrate binding domain AM474_RS07515 PF04143 Sulphur transport AM474_RS07525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM474_RS07530 PF04977 Septum formation initiator AM474_RS07535 PF00113 Enolase, C-terminal TIM barrel domain AM474_RS07535 PF03952 Enolase, N-terminal domain AM474_RS07540 PF00793 DAHP synthetase I family AM474_RS07545 PF00117 Glutamine amidotransferase class-I AM474_RS07545 PF06418 CTP synthase N-terminus AM474_RS07550 PF09179 TilS substrate binding domain AM474_RS07550 PF01171 PP-loop family AM474_RS07550 PF11734 TilS substrate C-terminal domain AM474_RS07555 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM474_RS07560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM474_RS07560 PF14579 Helix-hairpin-helix motif AM474_RS07560 PF02811 PHP domain AM474_RS07560 PF01336 OB-fold nucleic acid binding domain AM474_RS07560 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM474_RS07565 PF01235 Sodium:alanine symporter family AM474_RS07570 PF01351 Ribonuclease HII AM474_RS07575 PF02684 Lipid-A-disaccharide synthetase AM474_RS07580 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS07580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM474_RS07585 PF07977 FabA-like domain AM474_RS07590 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS07590 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM474_RS07595 PF03938 Outer membrane protein (OmpH-like) AM474_RS07600 PF01103 Surface antigen AM474_RS07600 PF07244 Surface antigen variable number repeat AM474_RS07605 PF02163 Peptidase family M50 AM474_RS07605 PF17820 PDZ domain AM474_RS07605 PF13180 PDZ domain AM474_RS07610 PF13288 DXP reductoisomerase C-terminal domain AM474_RS07610 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM474_RS07610 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM474_RS07620 PF01255 Putative undecaprenyl diphosphate synthase AM474_RS07625 PF01765 Ribosome recycling factor AM474_RS07630 PF00696 Amino acid kinase family AM474_RS07635 PF00889 Elongation factor TS AM474_RS07640 PF00318 Ribosomal protein S2 AM474_RS07645 PF00557 Metallopeptidase family M24 AM474_RS07650 PF01842 ACT domain AM474_RS07650 PF08335 GlnD PII-uridylyltransferase AM474_RS07650 PF01909 Nucleotidyltransferase domain AM474_RS07650 PF01966 HD domain AM474_RS07655 PF00155 Aminotransferase class I and II AM474_RS07660 PF00999 Sodium/hydrogen exchanger family AM474_RS07680 PF03960 ArsC family AM474_RS07685 PF01810 LysE type translocator AM474_RS07690 PF14602 Hexapeptide repeat of succinyl-transferase AM474_RS07690 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AM474_RS07695 PF00266 Aminotransferase class-V AM474_RS07700 PF02657 Fe-S metabolism associated domain AM474_RS07720 PF00005 ABC transporter AM474_RS07725 PF01553 Acyltransferase AM474_RS07740 PF00873 AcrB/AcrD/AcrF family AM474_RS07745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS07760 PF04445 Putative SAM-dependent methyltransferase AM474_RS07775 PF01904 Protein of unknown function DUF72 AM474_RS07785 PF00814 Glycoprotease family AM474_RS07790 PF05191 Adenylate kinase, active site lid AM474_RS07805 PF13411 MerR HTH family regulatory protein AM474_RS07810 PF00403 Heavy-metal-associated domain AM474_RS07820 PF00691 OmpA family AM474_RS07825 PF01661 Macro domain AM474_RS07835 PF12146 Serine aminopeptidase, S33 AM474_RS07835 PF11647 Membrane Localization Domain AM474_RS07835 PF11713 Peptidase C80 family AM474_RS07835 PF16671 Actin cross-linking domain AM474_RS07835 PF07634 RtxA repeat AM474_RS07860 PF00152 tRNA synthetases class II (D, K and N) AM474_RS07860 PF01336 OB-fold nucleic acid binding domain AM474_RS07870 PF00360 Phytochrome region AM474_RS07870 PF01590 GAF domain AM474_RS07870 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS07870 PF00563 EAL domain AM474_RS07875 PF00072 Response regulator receiver domain AM474_RS07875 PF01339 CheB methylesterase AM474_RS07880 PF01627 Hpt domain AM474_RS07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS07880 PF00072 Response regulator receiver domain AM474_RS07880 PF01584 CheW-like domain AM474_RS07890 PF01739 CheR methyltransferase, SAM binding domain AM474_RS07900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS07900 PF00672 HAMP domain AM474_RS07900 PF12729 Four helix bundle sensory module for signal transduction AM474_RS07905 PF07690 Major Facilitator Superfamily AM474_RS07905 PF00083 Sugar (and other) transporter AM474_RS07910 PF00732 GMC oxidoreductase AM474_RS07910 PF05199 GMC oxidoreductase AM474_RS07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS07915 PF03466 LysR substrate binding domain AM474_RS07930 PF00196 Bacterial regulatory proteins, luxR family AM474_RS07930 PF00072 Response regulator receiver domain AM474_RS07945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM474_RS07975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS07980 PF02868 Thermolysin metallopeptidase, alpha-helical domain AM474_RS07980 PF01447 Thermolysin metallopeptidase, catalytic domain AM474_RS07980 PF03413 Peptidase propeptide and YPEB domain AM474_RS07980 PF07504 Fungalysin/Thermolysin Propeptide Motif AM474_RS07985 PF01368 DHH family AM474_RS07985 PF02272 DHHA1 domain AM474_RS07985 PF17768 RecJ OB domain AM474_RS07990 PF07152 YaeQ protein AM474_RS08000 PF05491 RuvB C-terminal winged helix domain AM474_RS08000 PF17864 RuvB AAA lid domain AM474_RS08000 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM474_RS08025 PF02515 CoA-transferase family III AM474_RS08040 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS08040 PF14821 Threonine synthase N terminus AM474_RS08045 PF03447 Homoserine dehydrogenase, NAD binding domain AM474_RS08045 PF00742 Homoserine dehydrogenase AM474_RS08045 PF01842 ACT domain AM474_RS08050 PF10411 Disulfide bond isomerase protein N-terminus AM474_RS08050 PF13098 Thioredoxin-like domain AM474_RS08055 PF00589 Phage integrase family AM474_RS08055 PF02899 Phage integrase, N-terminal SAM-like domain AM474_RS08070 PF03061 Thioesterase superfamily AM474_RS08075 PF01245 Ribosomal protein L19 AM474_RS08080 PF01746 tRNA (Guanine-1)-methyltransferase AM474_RS08085 PF05239 PRC-barrel domain AM474_RS08085 PF01782 RimM N-terminal domain AM474_RS08090 PF00886 Ribosomal protein S16 AM474_RS08095 PF02978 Signal peptide binding domain AM474_RS08095 PF02881 SRP54-type protein, helical bundle domain AM474_RS08095 PF00448 SRP54-type protein, GTPase domain AM474_RS08105 PF00571 CBS domain AM474_RS08105 PF03471 Transporter associated domain AM474_RS08105 PF01595 Cyclin M transmembrane N-terminal domain AM474_RS08115 PF00083 Sugar (and other) transporter AM474_RS08115 PF07690 Major Facilitator Superfamily AM474_RS08125 PF01370 NAD dependent epimerase/dehydratase family AM474_RS08125 PF02222 ATP-grasp domain AM474_RS08135 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS08140 PF00293 NUDIX domain AM474_RS08145 PF09297 NADH pyrophosphatase zinc ribbon domain AM474_RS08145 PF00293 NUDIX domain AM474_RS08155 PF07702 UTRA domain AM474_RS08155 PF00392 Bacterial regulatory proteins, gntR family AM474_RS08160 PF01979 Amidohydrolase family AM474_RS08165 PF01380 SIS domain AM474_RS08170 PF05524 PEP-utilising enzyme, N-terminal AM474_RS08170 PF00381 PTS HPr component phosphorylation site AM474_RS08170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM474_RS08170 PF02896 PEP-utilising enzyme, TIM barrel domain AM474_RS08170 PF00391 PEP-utilising enzyme, mobile domain AM474_RS08175 PF02378 Phosphotransferase system, EIIC AM474_RS08175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM474_RS08175 PF00367 phosphotransferase system, EIIB AM474_RS08180 PF01784 NIF3 (NGG1p interacting factor 3) AM474_RS08190 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM474_RS08190 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM474_RS08190 PF02769 AIR synthase related protein, C-terminal domain AM474_RS08195 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS08195 PF01464 Transglycosylase SLT domain AM474_RS08215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM474_RS08220 PF00394 Multicopper oxidase AM474_RS08220 PF07731 Multicopper oxidase AM474_RS08220 PF07732 Multicopper oxidase AM474_RS08230 PF03743 Bacterial conjugation TrbI-like protein AM474_RS08245 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AM474_RS08260 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AM474_RS08270 PF04956 TrbC/VIRB2 family AM474_RS08275 PF00437 Type II/IV secretion system protein AM474_RS08285 PF02534 Type IV secretory system Conjugative DNA transfer AM474_RS08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS08295 PF03466 LysR substrate binding domain AM474_RS08320 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS08325 PF09278 MerR, DNA binding AM474_RS08325 PF00376 MerR family regulatory protein AM474_RS08330 PF00403 Heavy-metal-associated domain AM474_RS08335 PF01022 Bacterial regulatory protein, arsR family AM474_RS08340 PF07690 Major Facilitator Superfamily AM474_RS08345 PF02583 Metal-sensitive transcriptional repressor AM474_RS08350 PF01545 Cation efflux family AM474_RS08355 PF01022 Bacterial regulatory protein, arsR family AM474_RS08360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS08365 PF00873 AcrB/AcrD/AcrF family AM474_RS08370 PF02321 Outer membrane efflux protein AM474_RS08375 PF13411 MerR HTH family regulatory protein AM474_RS08380 PF07690 Major Facilitator Superfamily AM474_RS08390 PF00462 Glutaredoxin AM474_RS08405 PF10502 Signal peptidase, peptidase S26 AM474_RS08420 PF13614 AAA domain AM474_RS08465 PF05284 Protein of unknown function (DUF736) AM474_RS08475 PF02195 ParB-like nuclease domain AM474_RS08480 PF06067 Domain of unknown function (DUF932) AM474_RS08490 PF04002 RadC-like JAB domain AM474_RS08505 PF03852 DNA mismatch endonuclease Vsr AM474_RS08510 PF00145 C-5 cytosine-specific DNA methylase AM474_RS08535 PF00589 Phage integrase family AM474_RS08535 PF13356 Arm DNA-binding domain AM474_RS08540 PF00117 Glutamine amidotransferase class-I AM474_RS08540 PF02540 NAD synthase AM474_RS08540 PF00958 GMP synthase C terminal domain AM474_RS08545 PF00478 IMP dehydrogenase / GMP reductase domain AM474_RS08545 PF00571 CBS domain AM474_RS08550 PF00196 Bacterial regulatory proteins, luxR family AM474_RS08550 PF00072 Response regulator receiver domain AM474_RS08565 PF00850 Histone deacetylase domain AM474_RS08575 PF03466 LysR substrate binding domain AM474_RS08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS08580 PF02601 Exonuclease VII, large subunit AM474_RS08580 PF13742 OB-fold nucleic acid binding domain AM474_RS08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS08585 PF03466 LysR substrate binding domain AM474_RS08590 PF03480 Bacterial extracellular solute-binding protein, family 7 AM474_RS08600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM474_RS08610 PF01965 DJ-1/PfpI family AM474_RS08610 PF12833 Helix-turn-helix domain AM474_RS08615 PF00857 Isochorismatase family AM474_RS08625 PF04314 Copper chaperone PCu(A)C AM474_RS08635 PF01551 Peptidase family M23 AM474_RS08635 PF08525 Opacity-associated protein A N-terminal motif AM474_RS08635 PF01476 LysM domain AM474_RS08650 PF07715 TonB-dependent Receptor Plug Domain AM474_RS08650 PF00593 TonB dependent receptor AM474_RS08660 PF00682 HMGL-like AM474_RS08660 PF08502 LeuA allosteric (dimerisation) domain AM474_RS08675 PF00248 Aldo/keto reductase family AM474_RS08685 PF00795 Carbon-nitrogen hydrolase AM474_RS08690 PF00155 Aminotransferase class I and II AM474_RS08695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM474_RS08695 PF01926 50S ribosome-binding GTPase AM474_RS08700 PF13360 PQQ-like domain AM474_RS08710 PF03129 Anticodon binding domain AM474_RS08710 PF13393 Histidyl-tRNA synthetase AM474_RS08715 PF04551 GcpE protein AM474_RS08720 PF13464 Domain of unknown function (DUF4115) AM474_RS08730 PF04055 Radical SAM superfamily AM474_RS08735 PF00334 Nucleoside diphosphate kinase AM474_RS08740 PF04384 Iron-sulphur cluster assembly AM474_RS08745 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS08750 PF00012 Hsp70 protein AM474_RS08755 PF00226 DnaJ domain AM474_RS08755 PF07743 HSCB C-terminal oligomerisation domain AM474_RS08760 PF01521 Iron-sulphur cluster biosynthesis AM474_RS08765 PF01592 NifU-like N terminal domain AM474_RS08770 PF00266 Aminotransferase class-V AM474_RS08775 PF02082 Transcriptional regulator AM474_RS08780 PF06426 Serine acetyltransferase, N-terminal AM474_RS08780 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS08785 PF00588 SpoU rRNA Methylase family AM474_RS08790 PF00459 Inositol monophosphatase family AM474_RS08795 PF05433 Glycine zipper 2TM domain AM474_RS08800 PF02355 Protein export membrane protein AM474_RS08800 PF07549 SecD/SecF GG Motif AM474_RS08805 PF02355 Protein export membrane protein AM474_RS08805 PF13721 SecD export protein N-terminal TM region AM474_RS08805 PF07549 SecD/SecF GG Motif AM474_RS08810 PF02699 Preprotein translocase subunit AM474_RS08815 PF01702 Queuine tRNA-ribosyltransferase AM474_RS08820 PF02547 Queuosine biosynthesis protein AM474_RS08830 PF00563 EAL domain AM474_RS08830 PF12792 CSS motif domain associated with EAL AM474_RS08840 PF03739 Lipopolysaccharide export system permease LptF/LptG AM474_RS08845 PF03739 Lipopolysaccharide export system permease LptF/LptG AM474_RS08855 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS08855 PF12833 Helix-turn-helix domain AM474_RS08860 PF02789 Cytosol aminopeptidase family, N-terminal domain AM474_RS08860 PF00883 Cytosol aminopeptidase family, catalytic domain AM474_RS08865 PF04364 DNA polymerase III chi subunit, HolC AM474_RS08875 PF08264 Anticodon-binding domain of tRNA AM474_RS08875 PF00133 tRNA synthetases class I (I, L, M and V) AM474_RS08875 PF10458 Valyl tRNA synthetase tRNA binding arm AM474_RS08890 PF02653 Branched-chain amino acid transport system / permease component AM474_RS08895 PF00005 ABC transporter AM474_RS08900 PF03600 Citrate transporter AM474_RS08900 PF02080 TrkA-C domain AM474_RS08905 PF05971 RNA methyltransferase AM474_RS08935 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS08935 PF00107 Zinc-binding dehydrogenase AM474_RS08945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS08945 PF03466 LysR substrate binding domain AM474_RS08965 PF04245 37-kD nucleoid-associated bacterial protein AM474_RS08985 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS08990 PF01541 GIY-YIG catalytic domain AM474_RS09005 PF01066 CDP-alcohol phosphatidyltransferase AM474_RS09010 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS09015 PF02230 Phospholipase/Carboxylesterase AM474_RS09020 PF00501 AMP-binding enzyme AM474_RS09020 PF13193 AMP-binding enzyme C-terminal domain AM474_RS09030 PF00271 Helicase conserved C-terminal domain AM474_RS09030 PF00270 DEAD/DEAH box helicase AM474_RS09035 PF02423 Ornithine cyclodeaminase/mu-crystallin family AM474_RS09040 PF01266 FAD dependent oxidoreductase AM474_RS09045 PF08348 YheO-like PAS domain AM474_RS09045 PF13309 HTH domain AM474_RS09050 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS09055 PF00593 TonB dependent receptor AM474_RS09055 PF07715 TonB-dependent Receptor Plug Domain AM474_RS09065 PF06463 Molybdenum Cofactor Synthesis C AM474_RS09065 PF04055 Radical SAM superfamily AM474_RS09070 PF09312 SurA N-terminal domain AM474_RS09075 PF02665 Nitrate reductase gamma subunit AM474_RS09080 PF02613 Nitrate reductase delta subunit AM474_RS09085 PF14711 Respiratory nitrate reductase beta C-terminal AM474_RS09085 PF13247 4Fe-4S dicluster domain AM474_RS09090 PF14710 Respiratory nitrate reductase alpha N-terminal AM474_RS09090 PF01568 Molydopterin dinucleotide binding domain AM474_RS09090 PF00384 Molybdopterin oxidoreductase AM474_RS09095 PF07690 Major Facilitator Superfamily AM474_RS09100 PF07690 Major Facilitator Superfamily AM474_RS09105 PF07730 Histidine kinase AM474_RS09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS09105 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM474_RS09105 PF00672 HAMP domain AM474_RS09110 PF00072 Response regulator receiver domain AM474_RS09110 PF00196 Bacterial regulatory proteins, luxR family AM474_RS09115 PF08859 DGC domain AM474_RS09125 PF08241 Methyltransferase domain AM474_RS09130 PF00106 short chain dehydrogenase AM474_RS09155 PF00999 Sodium/hydrogen exchanger family AM474_RS09165 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS09170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM474_RS09175 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS09180 PF00571 CBS domain AM474_RS09180 PF00005 ABC transporter AM474_RS09185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS09185 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS09195 PF04632 Fusaric acid resistance protein family AM474_RS09200 PF02321 Outer membrane efflux protein AM474_RS09205 PF03466 LysR substrate binding domain AM474_RS09205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS09210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM474_RS09210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM474_RS09215 PF00892 EamA-like transporter family AM474_RS09220 PF01965 DJ-1/PfpI family AM474_RS09220 PF12833 Helix-turn-helix domain AM474_RS09225 PF08281 Sigma-70, region 4 AM474_RS09225 PF04542 Sigma-70 region 2 AM474_RS09230 PF16220 Domain of unknown function (DUF4880) AM474_RS09230 PF04773 FecR protein AM474_RS09235 PF00593 TonB dependent receptor AM474_RS09235 PF07715 TonB-dependent Receptor Plug Domain AM474_RS09235 PF07660 Secretin and TonB N terminus short domain AM474_RS09245 PF00009 Elongation factor Tu GTP binding domain AM474_RS09245 PF16658 Class II release factor RF3, C-terminal domain AM474_RS09245 PF03144 Elongation factor Tu domain 2 AM474_RS09280 PF16655 PhoD-like phosphatase, N-terminal domain AM474_RS09280 PF09423 PhoD-like phosphatase AM474_RS09285 PF02036 SCP-2 sterol transfer family AM474_RS09290 PF01136 Peptidase family U32 AM474_RS09295 PF01136 Peptidase family U32 AM474_RS09300 PF03453 MoeA N-terminal region (domain I and II) AM474_RS09300 PF03454 MoeA C-terminal region (domain IV) AM474_RS09300 PF00994 Probable molybdopterin binding domain AM474_RS09305 PF00994 Probable molybdopterin binding domain AM474_RS09310 PF02391 MoaE protein AM474_RS09315 PF02597 ThiS family AM474_RS09320 PF01967 MoaC family AM474_RS09340 PF13638 PIN domain AM474_RS09340 PF02562 PhoH-like protein AM474_RS09350 PF00403 Heavy-metal-associated domain AM474_RS09355 PF00196 Bacterial regulatory proteins, luxR family AM474_RS09355 PF17874 MalT-like TPR region AM474_RS09360 PF07044 Protein of unknown function (DUF1329) AM474_RS09375 PF00501 AMP-binding enzyme AM474_RS09375 PF13193 AMP-binding enzyme C-terminal domain AM474_RS09380 PF02803 Thiolase, C-terminal domain AM474_RS09380 PF00108 Thiolase, N-terminal domain AM474_RS09390 PF02311 AraC-like ligand binding domain AM474_RS09390 PF12833 Helix-turn-helix domain AM474_RS09400 PF02322 Cytochrome bd terminal oxidase subunit II AM474_RS09405 PF01654 Cytochrome bd terminal oxidase subunit I AM474_RS09410 PF03180 NLPA lipoprotein AM474_RS09415 PF00158 Sigma-54 interaction domain AM474_RS09420 PF02028 BCCT, betaine/carnitine/choline family transporter AM474_RS09425 PF03169 OPT oligopeptide transporter protein AM474_RS09430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM474_RS09435 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS09440 PF00005 ABC transporter AM474_RS09445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM474_RS09455 PF00216 Bacterial DNA-binding protein AM474_RS09475 PF13302 Acetyltransferase (GNAT) domain AM474_RS09480 PF13302 Acetyltransferase (GNAT) domain AM474_RS09485 PF01627 Hpt domain AM474_RS09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS09485 PF00072 Response regulator receiver domain AM474_RS09485 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS09485 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS09485 PF00989 PAS fold AM474_RS09490 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS09490 PF13426 PAS domain AM474_RS09490 PF00563 EAL domain AM474_RS09495 PF00072 Response regulator receiver domain AM474_RS09495 PF00196 Bacterial regulatory proteins, luxR family AM474_RS09505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS09505 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS09510 PF00271 Helicase conserved C-terminal domain AM474_RS09510 PF00270 DEAD/DEAH box helicase AM474_RS09520 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) AM474_RS09530 PF00296 Luciferase-like monooxygenase AM474_RS09545 PF00106 short chain dehydrogenase AM474_RS09565 PF10137 Predicted nucleotide-binding protein containing TIR-like domain AM474_RS09580 PF01348 Type II intron maturase AM474_RS09580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM474_RS09590 PF00005 ABC transporter AM474_RS09600 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS09605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM474_RS09605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM474_RS09610 PF03466 LysR substrate binding domain AM474_RS09610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS09640 PF04851 Type III restriction enzyme, res subunit AM474_RS09675 PF00270 DEAD/DEAH box helicase AM474_RS09675 PF04408 Helicase associated domain (HA2) AM474_RS09675 PF08482 ATP-dependent helicase C-terminal AM474_RS09675 PF00271 Helicase conserved C-terminal domain AM474_RS09685 PF16916 Dimerisation domain of Zinc Transporter AM474_RS09685 PF01545 Cation efflux family AM474_RS09695 PF01037 Lrp/AsnC ligand binding domain AM474_RS09710 PF00849 RNA pseudouridylate synthase AM474_RS09715 PF12706 Beta-lactamase superfamily domain AM474_RS09720 PF02810 SEC-C motif AM474_RS09720 PF01043 SecA preprotein cross-linking domain AM474_RS09720 PF07517 SecA DEAD-like domain AM474_RS09720 PF07516 SecA Wing and Scaffold domain AM474_RS09725 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM474_RS09725 PF01048 Phosphorylase superfamily AM474_RS09735 PF18158 Adaptive response protein AidB N-terminal domain AM474_RS09735 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS09735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS09745 PF01627 Hpt domain AM474_RS09745 PF00072 Response regulator receiver domain AM474_RS09745 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS09750 PF08543 Phosphomethylpyrimidine kinase AM474_RS09755 PF02581 Thiamine monophosphate synthase AM474_RS09760 PF00202 Aminotransferase class-III AM474_RS09775 PF04055 Radical SAM superfamily AM474_RS09775 PF00919 Uncharacterized protein family UPF0004 AM474_RS09775 PF01938 TRAM domain AM474_RS09780 PF02562 PhoH-like protein AM474_RS09785 PF02130 Uncharacterized protein family UPF0054 AM474_RS09790 PF03471 Transporter associated domain AM474_RS09790 PF00571 CBS domain AM474_RS09795 PF00795 Carbon-nitrogen hydrolase AM474_RS09800 PF02698 DUF218 domain AM474_RS09810 PF08264 Anticodon-binding domain of tRNA AM474_RS09810 PF00133 tRNA synthetases class I (I, L, M and V) AM474_RS09810 PF13603 Leucyl-tRNA synthetase, Domain 2 AM474_RS09810 PF09334 tRNA synthetases class I (M) AM474_RS09835 PF13406 Transglycosylase SLT domain AM474_RS09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS09845 PF03466 LysR substrate binding domain AM474_RS09850 PF04055 Radical SAM superfamily AM474_RS09850 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM474_RS09855 PF03099 Biotin/lipoate A/B protein ligase family AM474_RS09860 PF04359 Protein of unknown function (DUF493) AM474_RS09865 PF00768 D-alanyl-D-alanine carboxypeptidase AM474_RS09865 PF07943 Penicillin-binding protein 5, C-terminal domain AM474_RS09870 PF03330 Lytic transglycolase AM474_RS09870 PF05036 Sporulation related domain AM474_RS09875 PF13406 Transglycosylase SLT domain AM474_RS09880 PF01098 Cell cycle protein AM474_RS09885 PF03717 Penicillin-binding Protein dimerisation domain AM474_RS09885 PF00905 Penicillin binding protein transpeptidase domain AM474_RS09890 PF02590 Predicted SPOUT methyltransferase AM474_RS09900 PF01467 Cytidylyltransferase-like AM474_RS09905 PF00171 Aldehyde dehydrogenase family AM474_RS09920 PF02245 Methylpurine-DNA glycosylase (MPG) AM474_RS09925 PF09335 SNARE associated Golgi protein AM474_RS09935 PF04172 LrgB-like family AM474_RS09940 PF03788 LrgA family AM474_RS09945 PF01575 MaoC like domain AM474_RS09955 PF13460 NAD(P)H-binding AM474_RS09965 PF02441 Flavoprotein AM474_RS09970 PF08245 Mur ligase middle domain AM474_RS09970 PF01225 Mur ligase family, catalytic domain AM474_RS09970 PF02875 Mur ligase family, glutamate ligase domain AM474_RS09975 PF00158 Sigma-54 interaction domain AM474_RS09975 PF02954 Bacterial regulatory protein, Fis family AM474_RS09975 PF01590 GAF domain AM474_RS09980 PF00171 Aldehyde dehydrogenase family AM474_RS09985 PF13520 Amino acid permease AM474_RS09990 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM474_RS09995 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM474_RS10000 PF00583 Acetyltransferase (GNAT) family AM474_RS10010 PF00069 Protein kinase domain AM474_RS10015 PF09335 SNARE associated Golgi protein AM474_RS10020 PF06167 Glucose-regulated metallo-peptidase M90 AM474_RS10025 PF00719 Inorganic pyrophosphatase AM474_RS10030 PF00486 Transcriptional regulatory protein, C terminal AM474_RS10030 PF00072 Response regulator receiver domain AM474_RS10040 PF00230 Major intrinsic protein AM474_RS10050 PF00672 HAMP domain AM474_RS10050 PF00989 PAS fold AM474_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS10050 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS10050 PF18698 Histidine kinase sensor domain AM474_RS10055 PF00005 ABC transporter AM474_RS10075 PF13378 Enolase C-terminal domain-like AM474_RS10080 PF02609 Exonuclease VII small subunit AM474_RS10085 PF00348 Polyprenyl synthetase AM474_RS10090 PF02779 Transketolase, pyrimidine binding domain AM474_RS10090 PF02780 Transketolase, C-terminal domain AM474_RS10090 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM474_RS10095 PF01497 Periplasmic binding protein AM474_RS10105 PF00925 GTP cyclohydrolase II AM474_RS10120 PF04608 Phosphatidylglycerophosphatase A AM474_RS10125 PF00586 AIR synthase related protein, N-terminal domain AM474_RS10125 PF02769 AIR synthase related protein, C-terminal domain AM474_RS10130 PF01029 NusB family AM474_RS10135 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM474_RS10140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM474_RS10140 PF00925 GTP cyclohydrolase II AM474_RS10145 PF00677 Lumazine binding domain AM474_RS10150 PF01872 RibD C-terminal domain AM474_RS10150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM474_RS10155 PF03477 ATP cone domain AM474_RS10175 PF00085 Thioredoxin AM474_RS10190 PF12704 MacB-like periplasmic core domain AM474_RS10190 PF00005 ABC transporter AM474_RS10190 PF02687 FtsX-like permease family AM474_RS10205 PF03922 OmpW family AM474_RS10210 PF04247 Invasion gene expression up-regulator, SirB AM474_RS10215 PF16363 GDP-mannose 4,6 dehydratase AM474_RS10225 PF12852 Cupin AM474_RS10225 PF12833 Helix-turn-helix domain AM474_RS10235 PF13520 Amino acid permease AM474_RS10240 PF00171 Aldehyde dehydrogenase family AM474_RS10260 PF09856 Predicted transcriptional regulator (DUF2083) AM474_RS10260 PF06114 IrrE N-terminal-like domain AM474_RS10260 PF01381 Helix-turn-helix AM474_RS10265 PF13193 AMP-binding enzyme C-terminal domain AM474_RS10265 PF00550 Phosphopantetheine attachment site AM474_RS10265 PF00668 Condensation domain AM474_RS10265 PF00501 AMP-binding enzyme AM474_RS10270 PF00106 short chain dehydrogenase AM474_RS10275 PF00196 Bacterial regulatory proteins, luxR family AM474_RS10275 PF00072 Response regulator receiver domain AM474_RS10285 PF05860 haemagglutination activity domain AM474_RS10290 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM474_RS10290 PF02753 Pili assembly chaperone PapD, C-terminal domain AM474_RS10295 PF13953 PapC C-terminal domain AM474_RS10295 PF13954 PapC N-terminal domain AM474_RS10295 PF00577 Outer membrane usher protein AM474_RS10300 PF02753 Pili assembly chaperone PapD, C-terminal domain AM474_RS10300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM474_RS10310 PF17409 MoaF C-terminal domain AM474_RS10310 PF10703 MoaF N-terminal domain AM474_RS10315 PF00202 Aminotransferase class-III AM474_RS10330 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AM474_RS10330 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AM474_RS10335 PF01613 Flavin reductase like domain AM474_RS10345 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS10350 PF00355 Rieske [2Fe-2S] domain AM474_RS10370 PF07690 Major Facilitator Superfamily AM474_RS10375 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS10375 PF00107 Zinc-binding dehydrogenase AM474_RS10390 PF00732 GMC oxidoreductase AM474_RS10390 PF05199 GMC oxidoreductase AM474_RS10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS10400 PF03466 LysR substrate binding domain AM474_RS10405 PF01966 HD domain AM474_RS10405 PF11871 Domain of unknown function (DUF3391) AM474_RS10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS10415 PF03466 LysR substrate binding domain AM474_RS10420 PF00144 Beta-lactamase AM474_RS10430 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS10430 PF01627 Hpt domain AM474_RS10430 PF00072 Response regulator receiver domain AM474_RS10430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM474_RS10430 PF00672 HAMP domain AM474_RS10430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS10435 PF07690 Major Facilitator Superfamily AM474_RS10445 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM474_RS10445 PF03641 Possible lysine decarboxylase AM474_RS10445 PF11892 Domain of unknown function (DUF3412) AM474_RS10455 PF01590 GAF domain AM474_RS10455 PF08446 PAS fold AM474_RS10455 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS10455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS10455 PF00360 Phytochrome region AM474_RS10465 PF01636 Phosphotransferase enzyme family AM474_RS10475 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS10480 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS10485 PF00171 Aldehyde dehydrogenase family AM474_RS10490 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM474_RS10495 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AM474_RS10500 PF07690 Major Facilitator Superfamily AM474_RS10505 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS10510 PF03328 HpcH/HpaI aldolase/citrate lyase family AM474_RS10520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM474_RS10520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM474_RS10525 PF12801 4Fe-4S binding domain AM474_RS10525 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AM474_RS10525 PF13746 4Fe-4S dicluster domain AM474_RS10530 PF00392 Bacterial regulatory proteins, gntR family AM474_RS10530 PF00155 Aminotransferase class I and II AM474_RS10535 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM474_RS10545 PF01047 MarR family AM474_RS10550 PF07690 Major Facilitator Superfamily AM474_RS10555 PF03573 outer membrane porin, OprD family AM474_RS10560 PF00579 tRNA synthetases class I (W and Y) AM474_RS10590 PF00664 ABC transporter transmembrane region AM474_RS10590 PF03412 Peptidase C39 family AM474_RS10590 PF00005 ABC transporter AM474_RS10610 PF02954 Bacterial regulatory protein, Fis family AM474_RS10610 PF00158 Sigma-54 interaction domain AM474_RS10610 PF01590 GAF domain AM474_RS10620 PF01513 ATP-NAD kinase AM474_RS10625 PF00676 Dehydrogenase E1 component AM474_RS10630 PF02780 Transketolase, C-terminal domain AM474_RS10630 PF02779 Transketolase, pyrimidine binding domain AM474_RS10635 PF00364 Biotin-requiring enzyme AM474_RS10635 PF00561 alpha/beta hydrolase fold AM474_RS10640 PF00107 Zinc-binding dehydrogenase AM474_RS10640 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS10645 PF08239 Bacterial SH3 domain AM474_RS10650 PF00296 Luciferase-like monooxygenase AM474_RS10655 PF07715 TonB-dependent Receptor Plug Domain AM474_RS10665 PF00005 ABC transporter AM474_RS10670 PF01497 Periplasmic binding protein AM474_RS10675 PF01032 FecCD transport family AM474_RS10680 PF01032 FecCD transport family AM474_RS10685 PF01425 Amidase AM474_RS10695 PF00392 Bacterial regulatory proteins, gntR family AM474_RS10695 PF00155 Aminotransferase class I and II AM474_RS10705 PF00248 Aldo/keto reductase family AM474_RS10710 PF07715 TonB-dependent Receptor Plug Domain AM474_RS10710 PF00593 TonB dependent receptor AM474_RS10710 PF07660 Secretin and TonB N terminus short domain AM474_RS10715 PF02082 Transcriptional regulator AM474_RS10720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS10725 PF01965 DJ-1/PfpI family AM474_RS10735 PF01042 Endoribonuclease L-PSP AM474_RS10740 PF03466 LysR substrate binding domain AM474_RS10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS10750 PF05698 Bacterial trigger factor protein (TF) C-terminus AM474_RS10760 PF13649 Methyltransferase domain AM474_RS10765 PF03573 outer membrane porin, OprD family AM474_RS10770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS10770 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS10770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS10795 PF01965 DJ-1/PfpI family AM474_RS10795 PF12833 Helix-turn-helix domain AM474_RS10800 PF00392 Bacterial regulatory proteins, gntR family AM474_RS10800 PF07729 FCD domain AM474_RS10810 PF00083 Sugar (and other) transporter AM474_RS10815 PF00701 Dihydrodipicolinate synthetase family AM474_RS10820 PF00171 Aldehyde dehydrogenase family AM474_RS10830 PF00196 Bacterial regulatory proteins, luxR family AM474_RS10830 PF00072 Response regulator receiver domain AM474_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS10835 PF00989 PAS fold AM474_RS10835 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS10840 PF00501 AMP-binding enzyme AM474_RS10840 PF13193 AMP-binding enzyme C-terminal domain AM474_RS10845 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS10845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS10845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS10845 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM474_RS10850 PF00753 Metallo-beta-lactamase superfamily AM474_RS10855 PF07478 D-ala D-ala ligase C-terminus AM474_RS10855 PF01820 D-ala D-ala ligase N-terminus AM474_RS10860 PF03060 Nitronate monooxygenase AM474_RS10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS10865 PF03466 LysR substrate binding domain AM474_RS10870 PF10282 Lactonase, 7-bladed beta-propeller AM474_RS10880 PF13533 Biotin-lipoyl like AM474_RS10885 PF00873 AcrB/AcrD/AcrF family AM474_RS10890 PF02321 Outer membrane efflux protein AM474_RS10895 PF00891 O-methyltransferase domain AM474_RS10895 PF16864 Dimerisation domain AM474_RS10905 PF03284 Phenazine biosynthesis protein A/B AM474_RS10910 PF03284 Phenazine biosynthesis protein A/B AM474_RS10915 PF01474 Class-II DAHP synthetase family AM474_RS10920 PF00857 Isochorismatase family AM474_RS10925 PF00117 Glutamine amidotransferase class-I AM474_RS10925 PF00425 chorismate binding enzyme AM474_RS10930 PF02567 Phenazine biosynthesis-like protein AM474_RS10935 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM474_RS10935 PF01243 Pyridoxamine 5'-phosphate oxidase AM474_RS10940 PF01494 FAD binding domain AM474_RS10950 PF03929 PepSY-associated TM region AM474_RS10960 PF00593 TonB dependent receptor AM474_RS10960 PF07715 TonB-dependent Receptor Plug Domain AM474_RS10965 PF00005 ABC transporter AM474_RS10970 PF00664 ABC transporter transmembrane region AM474_RS10970 PF00005 ABC transporter AM474_RS10970 PF08021 Siderophore-interacting FAD-binding domain AM474_RS10970 PF04954 Siderophore-interacting protein AM474_RS10980 PF08242 Methyltransferase domain AM474_RS10980 PF00550 Phosphopantetheine attachment site AM474_RS10980 PF00501 AMP-binding enzyme AM474_RS10980 PF00668 Condensation domain AM474_RS10985 PF08242 Methyltransferase domain AM474_RS10985 PF00550 Phosphopantetheine attachment site AM474_RS10985 PF00501 AMP-binding enzyme AM474_RS10985 PF00668 Condensation domain AM474_RS10990 PF12833 Helix-turn-helix domain AM474_RS10995 PF13193 AMP-binding enzyme C-terminal domain AM474_RS10995 PF00501 AMP-binding enzyme AM474_RS11000 PF00975 Thioesterase domain AM474_RS11005 PF01817 Chorismate mutase type II AM474_RS11010 PF00425 chorismate binding enzyme AM474_RS11015 PF00436 Single-strand binding protein family AM474_RS11020 PF07690 Major Facilitator Superfamily AM474_RS11025 PF17760 UvrA interaction domain AM474_RS11025 PF17755 UvrA DNA-binding domain AM474_RS11030 PF00210 Ferritin-like domain AM474_RS11035 PF00199 Catalase AM474_RS11035 PF06628 Catalase-related immune-responsive AM474_RS11040 PF01196 Ribosomal protein L17 AM474_RS11045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM474_RS11045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM474_RS11045 PF01000 RNA polymerase Rpb3/RpoA insert domain AM474_RS11050 PF01479 S4 domain AM474_RS11050 PF00163 Ribosomal protein S4/S9 N-terminal domain AM474_RS11055 PF00411 Ribosomal protein S11 AM474_RS11060 PF00416 Ribosomal protein S13/S18 AM474_RS11065 PF00444 Ribosomal protein L36 AM474_RS11070 PF00344 SecY translocase AM474_RS11075 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM474_RS11080 PF00327 Ribosomal protein L30p/L7e AM474_RS11085 PF00333 Ribosomal protein S5, N-terminal domain AM474_RS11085 PF03719 Ribosomal protein S5, C-terminal domain AM474_RS11090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM474_RS11095 PF00347 Ribosomal protein L6 AM474_RS11100 PF00410 Ribosomal protein S8 AM474_RS11105 PF00253 Ribosomal protein S14p/S29e AM474_RS11110 PF00281 Ribosomal protein L5 AM474_RS11110 PF00673 ribosomal L5P family C-terminus AM474_RS11115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM474_RS11115 PF00467 KOW motif AM474_RS11120 PF00238 Ribosomal protein L14p/L23e AM474_RS11125 PF00366 Ribosomal protein S17 AM474_RS11130 PF00831 Ribosomal L29 protein AM474_RS11135 PF00252 Ribosomal protein L16p/L10e AM474_RS11140 PF00189 Ribosomal protein S3, C-terminal domain AM474_RS11140 PF07650 KH domain AM474_RS11145 PF00237 Ribosomal protein L22p/L17e AM474_RS11150 PF00203 Ribosomal protein S19 AM474_RS11155 PF00181 Ribosomal Proteins L2, RNA binding domain AM474_RS11155 PF03947 Ribosomal Proteins L2, C-terminal domain AM474_RS11160 PF00276 Ribosomal protein L23 AM474_RS11165 PF00573 Ribosomal protein L4/L1 family AM474_RS11170 PF00297 Ribosomal protein L3 AM474_RS11175 PF00338 Ribosomal protein S10p/S20e AM474_RS11180 PF00009 Elongation factor Tu GTP binding domain AM474_RS11180 PF03143 Elongation factor Tu C-terminal domain AM474_RS11180 PF03144 Elongation factor Tu domain 2 AM474_RS11185 PF00679 Elongation factor G C-terminus AM474_RS11185 PF14492 Elongation Factor G, domain II AM474_RS11185 PF00009 Elongation factor Tu GTP binding domain AM474_RS11185 PF03764 Elongation factor G, domain IV AM474_RS11185 PF03144 Elongation factor Tu domain 2 AM474_RS11190 PF00177 Ribosomal protein S7p/S5e AM474_RS11195 PF00164 Ribosomal protein S12/S23 AM474_RS11200 PF04997 RNA polymerase Rpb1, domain 1 AM474_RS11200 PF04998 RNA polymerase Rpb1, domain 5 AM474_RS11200 PF05000 RNA polymerase Rpb1, domain 4 AM474_RS11200 PF04983 RNA polymerase Rpb1, domain 3 AM474_RS11200 PF00623 RNA polymerase Rpb1, domain 2 AM474_RS11205 PF04563 RNA polymerase beta subunit AM474_RS11205 PF04560 RNA polymerase Rpb2, domain 7 AM474_RS11205 PF04561 RNA polymerase Rpb2, domain 2 AM474_RS11205 PF04565 RNA polymerase Rpb2, domain 3 AM474_RS11205 PF00562 RNA polymerase Rpb2, domain 6 AM474_RS11205 PF10385 RNA polymerase beta subunit external 1 domain AM474_RS11210 PF00542 Ribosomal protein L7/L12 C-terminal domain AM474_RS11210 PF16320 Ribosomal protein L7/L12 dimerisation domain AM474_RS11215 PF00466 Ribosomal protein L10 AM474_RS11220 PF00687 Ribosomal protein L1p/L10e family AM474_RS11225 PF00298 Ribosomal protein L11, RNA binding domain AM474_RS11225 PF03946 Ribosomal protein L11, N-terminal domain AM474_RS11230 PF00467 KOW motif AM474_RS11230 PF02357 Transcription termination factor nusG AM474_RS11235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM474_RS11245 PF03143 Elongation factor Tu C-terminal domain AM474_RS11245 PF03144 Elongation factor Tu domain 2 AM474_RS11245 PF00009 Elongation factor Tu GTP binding domain AM474_RS11270 PF03309 Type III pantothenate kinase AM474_RS11275 PF02237 Biotin protein ligase C terminal domain AM474_RS11275 PF03099 Biotin/lipoate A/B protein ligase family AM474_RS11275 PF08279 HTH domain AM474_RS11305 PF00579 tRNA synthetases class I (W and Y) AM474_RS11310 PF04225 Opacity-associated protein A LysM-like domain AM474_RS11310 PF01551 Peptidase family M23 AM474_RS11315 PF03702 Anhydro-N-acetylmuramic acid kinase AM474_RS11320 PF01521 Iron-sulphur cluster biosynthesis AM474_RS11335 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM474_RS11335 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM474_RS11340 PF03653 Uncharacterised protein family (UPF0093) AM474_RS11345 PF03060 Nitronate monooxygenase AM474_RS11355 PF00106 short chain dehydrogenase AM474_RS11360 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS11360 PF06480 FtsH Extracellular AM474_RS11360 PF17862 AAA+ lid domain AM474_RS11360 PF01434 Peptidase family M41 AM474_RS11365 PF01230 HIT domain AM474_RS11370 PF03232 Ubiquinone biosynthesis protein COQ7 AM474_RS11375 PF02675 S-adenosylmethionine decarboxylase AM474_RS11380 PF02566 OsmC-like protein AM474_RS11385 PF13545 Crp-like helix-turn-helix domain AM474_RS11385 PF00027 Cyclic nucleotide-binding domain AM474_RS11390 PF00218 Indole-3-glycerol phosphate synthase AM474_RS11395 PF02885 Glycosyl transferase family, helical bundle domain AM474_RS11395 PF00591 Glycosyl transferase family, a/b domain AM474_RS11400 PF00117 Glutamine amidotransferase class-I AM474_RS11480 PF00182 Chitinase class I AM474_RS11515 PF17482 Phage tail sheath C-terminal domain AM474_RS11515 PF04984 Phage tail sheath protein subtilisin-like domain AM474_RS11565 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM474_RS11570 PF00717 Peptidase S24-like AM474_RS11570 PF01381 Helix-turn-helix AM474_RS11575 PF11112 Pyocin activator protein PrtN AM474_RS11580 PF00425 chorismate binding enzyme AM474_RS11580 PF04715 Anthranilate synthase component I, N terminal region AM474_RS11585 PF13419 Haloacid dehalogenase-like hydrolase AM474_RS11590 PF00834 Ribulose-phosphate 3 epimerase family AM474_RS11595 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS11600 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS11610 PF08402 TOBE domain AM474_RS11610 PF00005 ABC transporter AM474_RS11620 PF00196 Bacterial regulatory proteins, luxR family AM474_RS11620 PF00072 Response regulator receiver domain AM474_RS11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS11625 PF07730 Histidine kinase AM474_RS11635 PF05099 Tellurite resistance protein TerB AM474_RS11635 PF00226 DnaJ domain AM474_RS11640 PF00483 Nucleotidyl transferase AM474_RS11645 PF01636 Phosphotransferase enzyme family AM474_RS11650 PF03968 OstA-like protein AM474_RS11650 PF04453 LPS transport system D AM474_RS11655 PF09312 SurA N-terminal domain AM474_RS11655 PF00639 PPIC-type PPIASE domain AM474_RS11660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM474_RS11665 PF00398 Ribosomal RNA adenine dimethylase AM474_RS11670 PF04379 ApaG domain AM474_RS11675 PF00149 Calcineurin-like phosphoesterase AM474_RS11680 PF00581 Rhodanese-like domain AM474_RS11685 PF08298 PrkA AAA domain AM474_RS11685 PF06798 PrkA serine protein kinase C-terminal domain AM474_RS11690 PF04285 Protein of unknown function (DUF444) AM474_RS11695 PF04293 SpoVR like protein AM474_RS11705 PF01966 HD domain AM474_RS11705 PF01743 Poly A polymerase head domain AM474_RS11705 PF12627 Probable RNA and SrmB- binding site of polymerase A AM474_RS11715 PF02152 Dihydroneopterin aldolase AM474_RS11720 PF02660 Glycerol-3-phosphate acyltransferase AM474_RS11725 PF00814 Glycoprotease family AM474_RS11730 PF01165 Ribosomal protein S21 AM474_RS11740 PF13662 Toprim domain AM474_RS11740 PF08278 DNA primase DnaG DnaB-binding AM474_RS11740 PF08275 DNA primase catalytic core, N-terminal domain AM474_RS11740 PF01807 CHC2 zinc finger AM474_RS11740 PF10410 DnaB-helicase binding domain of primase AM474_RS11745 PF04539 Sigma-70 region 3 AM474_RS11745 PF04545 Sigma-70, region 4 AM474_RS11745 PF03979 Sigma-70 factor, region 1.1 AM474_RS11745 PF04546 Sigma-70, non-essential region AM474_RS11745 PF00140 Sigma-70 factor, region 1.2 AM474_RS11745 PF04542 Sigma-70 region 2 AM474_RS11750 PF03707 Bacterial signalling protein N terminal repeat AM474_RS11750 PF00563 EAL domain AM474_RS11750 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS11825 PF13402 Peptidase M60, enhancin and enhancin-like AM474_RS11825 PF18642 Immunomodulating metalloprotease helical domain AM474_RS11825 PF18650 Immunomodulating metalloprotease N-terminal domain AM474_RS11830 PF09234 Domain of unknown function (DUF1963) AM474_RS11850 PF01679 Proteolipid membrane potential modulator AM474_RS11860 PF02627 Carboxymuconolactone decarboxylase family AM474_RS11865 PF12833 Helix-turn-helix domain AM474_RS11865 PF02311 AraC-like ligand binding domain AM474_RS11870 PF05656 Protein of unknown function (DUF805) AM474_RS11875 PF13419 Haloacid dehalogenase-like hydrolase AM474_RS11880 PF01863 Protein of unknown function DUF45 AM474_RS11890 PF08241 Methyltransferase domain AM474_RS11905 PF01116 Fructose-bisphosphate aldolase class-II AM474_RS11920 PF00162 Phosphoglycerate kinase AM474_RS11925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM474_RS11925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM474_RS11930 PF01261 Xylose isomerase-like TIM barrel AM474_RS11940 PF02779 Transketolase, pyrimidine binding domain AM474_RS11940 PF02780 Transketolase, C-terminal domain AM474_RS11940 PF00456 Transketolase, thiamine diphosphate binding domain AM474_RS11950 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM474_RS11950 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM474_RS11950 PF02772 S-adenosylmethionine synthetase, central domain AM474_RS11990 PF02600 Disulfide bond formation protein DsbB AM474_RS12000 PF04536 TPM domain AM474_RS12010 PF01266 FAD dependent oxidoreductase AM474_RS12020 PF00196 Bacterial regulatory proteins, luxR family AM474_RS12030 PF00117 Glutamine amidotransferase class-I AM474_RS12035 PF00202 Aminotransferase class-III AM474_RS12045 PF03475 3-alpha domain AM474_RS12045 PF03473 MOSC domain AM474_RS12050 PF03466 LysR substrate binding domain AM474_RS12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS12055 PF00027 Cyclic nucleotide-binding domain AM474_RS12055 PF13545 Crp-like helix-turn-helix domain AM474_RS12070 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM474_RS12075 PF00034 Cytochrome c AM474_RS12080 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM474_RS12085 PF00510 Cytochrome c oxidase subunit III AM474_RS12090 PF08406 CbbQ/NirQ/NorQ C-terminal AM474_RS12090 PF07728 AAA domain (dynein-related subfamily) AM474_RS12095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS12100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS12105 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS12115 PF17805 AsnC-like ligand binding domain AM474_RS12115 PF13404 AsnC-type helix-turn-helix domain AM474_RS12120 PF17805 AsnC-like ligand binding domain AM474_RS12125 PF17805 AsnC-like ligand binding domain AM474_RS12130 PF17805 AsnC-like ligand binding domain AM474_RS12135 PF06463 Molybdenum Cofactor Synthesis C AM474_RS12135 PF04055 Radical SAM superfamily AM474_RS12140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM474_RS12140 PF14824 Sirohaem biosynthesis protein central AM474_RS12140 PF10414 Sirohaem synthase dimerisation region AM474_RS12150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS12150 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS12150 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM474_RS12150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS12160 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS12160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS12160 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM474_RS12160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS12165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS12165 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM474_RS12165 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS12165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS12180 PF08241 Methyltransferase domain AM474_RS12185 PF12697 Alpha/beta hydrolase family AM474_RS12185 PF08241 Methyltransferase domain AM474_RS12190 PF00155 Aminotransferase class I and II AM474_RS12195 PF04055 Radical SAM superfamily AM474_RS12195 PF06968 Biotin and Thiamin Synthesis associated domain AM474_RS12205 PF02626 Carboxyltransferase domain, subdomain A and B AM474_RS12215 PF02785 Biotin carboxylase C-terminal domain AM474_RS12215 PF00289 Biotin carboxylase, N-terminal domain AM474_RS12215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM474_RS12220 PF00364 Biotin-requiring enzyme AM474_RS12225 PF03746 LamB/YcsF family AM474_RS12230 PF03466 LysR substrate binding domain AM474_RS12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS12240 PF00156 Phosphoribosyl transferase domain AM474_RS12245 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM474_RS12250 PF03459 TOBE domain AM474_RS12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS12255 PF01636 Phosphotransferase enzyme family AM474_RS12260 PF00892 EamA-like transporter family AM474_RS12275 PF01274 Malate synthase AM474_RS12285 PF12146 Serine aminopeptidase, S33 AM474_RS12300 PF03466 LysR substrate binding domain AM474_RS12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS12305 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM474_RS12310 PF00440 Bacterial regulatory proteins, tetR family AM474_RS12315 PF03061 Thioesterase superfamily AM474_RS12320 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS12320 PF13417 Glutathione S-transferase, N-terminal domain AM474_RS12325 PF08281 Sigma-70, region 4 AM474_RS12325 PF04542 Sigma-70 region 2 AM474_RS12330 PF04773 FecR protein AM474_RS12330 PF16220 Domain of unknown function (DUF4880) AM474_RS12335 PF00593 TonB dependent receptor AM474_RS12335 PF07715 TonB-dependent Receptor Plug Domain AM474_RS12365 PF06123 Inner membrane protein CreD AM474_RS12370 PF00672 HAMP domain AM474_RS12370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS12370 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS12375 PF00072 Response regulator receiver domain AM474_RS12375 PF00486 Transcriptional regulatory protein, C terminal AM474_RS12385 PF01553 Acyltransferase AM474_RS12395 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS12395 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS12395 PF07724 AAA domain (Cdc48 subfamily) AM474_RS12395 PF02861 Clp amino terminal domain, pathogenicity island component AM474_RS12395 PF17871 AAA lid domain AM474_RS12405 PF07690 Major Facilitator Superfamily AM474_RS12410 PF18030 RimK PreATP-grasp domain AM474_RS12410 PF08443 RimK-like ATP-grasp domain AM474_RS12415 PF00313 'Cold-shock' DNA-binding domain AM474_RS12420 PF03880 DbpA RNA binding domain AM474_RS12420 PF00270 DEAD/DEAH box helicase AM474_RS12420 PF00271 Helicase conserved C-terminal domain AM474_RS12425 PF12805 FUSC-like inner membrane protein yccS AM474_RS12435 PF16200 C-terminal region of band_7 AM474_RS12435 PF01145 SPFH domain / Band 7 family AM474_RS12445 PF01384 Phosphate transporter family AM474_RS12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS12455 PF03466 LysR substrate binding domain AM474_RS12460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS12460 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS12460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS12465 PF02515 CoA-transferase family III AM474_RS12470 PF01546 Peptidase family M20/M25/M40 AM474_RS12470 PF07687 Peptidase dimerisation domain AM474_RS12475 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM474_RS12490 PF01979 Amidohydrolase family AM474_RS12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS12495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM474_RS12500 PF01180 Dihydroorotate dehydrogenase AM474_RS12510 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM474_RS12515 PF07969 Amidohydrolase family AM474_RS12520 PF08362 YcdC-like protein, C-terminal region AM474_RS12520 PF00440 Bacterial regulatory proteins, tetR family AM474_RS12530 PF07660 Secretin and TonB N terminus short domain AM474_RS12530 PF00593 TonB dependent receptor AM474_RS12530 PF07715 TonB-dependent Receptor Plug Domain AM474_RS12540 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM474_RS12540 PF05221 S-adenosyl-L-homocysteine hydrolase AM474_RS12545 PF13291 ACT domain AM474_RS12545 PF04607 Region found in RelA / SpoT proteins AM474_RS12545 PF02824 TGS domain AM474_RS12550 PF02219 Methylenetetrahydrofolate reductase AM474_RS12560 PF00270 DEAD/DEAH box helicase AM474_RS12560 PF00271 Helicase conserved C-terminal domain AM474_RS12565 PF02321 Outer membrane efflux protein AM474_RS12565 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM474_RS12570 PF00873 AcrB/AcrD/AcrF family AM474_RS12575 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS12575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS12580 PF01047 MarR family AM474_RS12585 PF04264 YceI-like domain AM474_RS12590 PF01292 Prokaryotic cytochrome b561 AM474_RS12595 PF01593 Flavin containing amine oxidoreductase AM474_RS12605 PF00202 Aminotransferase class-III AM474_RS12610 PF04452 RNA methyltransferase AM474_RS12620 PF01810 LysE type translocator AM474_RS12635 PF01339 CheB methylesterase AM474_RS12640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS12640 PF01627 Hpt domain AM474_RS12640 PF02895 Signal transducing histidine kinase, homodimeric domain AM474_RS12640 PF01584 CheW-like domain AM474_RS12640 PF00072 Response regulator receiver domain AM474_RS12645 PF01739 CheR methyltransferase, SAM binding domain AM474_RS12645 PF03705 CheR methyltransferase, all-alpha domain AM474_RS12650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS12650 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM474_RS12655 PF01584 CheW-like domain AM474_RS12660 PF00072 Response regulator receiver domain AM474_RS12665 PF00072 Response regulator receiver domain AM474_RS12670 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM474_RS12670 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM474_RS12680 PF02622 Uncharacterized ACR, COG1678 AM474_RS12685 PF03652 Holliday junction resolvase AM474_RS12690 PF00156 Phosphoribosyl transferase domain AM474_RS12695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM474_RS12695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM474_RS12700 PF01979 Amidohydrolase family AM474_RS12705 PF01053 Cys/Met metabolism PLP-dependent enzyme AM474_RS12710 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS12710 PF00571 CBS domain AM474_RS12720 PF01545 Cation efflux family AM474_RS12725 PF00437 Type II/IV secretion system protein AM474_RS12730 PF00437 Type II/IV secretion system protein AM474_RS12735 PF01168 Alanine racemase, N-terminal domain AM474_RS12740 PF03807 NADP oxidoreductase coenzyme F420-dependent AM474_RS12740 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM474_RS12745 PF02325 YGGT family AM474_RS12750 PF02594 Uncharacterised ACR, YggU family COG1872 AM474_RS12755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM474_RS12755 PF01926 50S ribosome-binding GTPase AM474_RS12760 PF00561 alpha/beta hydrolase fold AM474_RS12765 PF00561 alpha/beta hydrolase fold AM474_RS12765 PF07021 Methionine biosynthesis protein MetW AM474_RS12775 PF01725 Ham1 family AM474_RS12780 PF04055 Radical SAM superfamily AM474_RS12780 PF06969 HemN C-terminal domain AM474_RS12795 PF07044 Protein of unknown function (DUF1329) AM474_RS12800 PF02390 Putative methyltransferase AM474_RS12805 PF05690 Thiazole biosynthesis protein ThiG AM474_RS12810 PF02597 ThiS family AM474_RS12810 PF05690 Thiazole biosynthesis protein ThiG AM474_RS12815 PF04241 Protein of unknown function (DUF423) AM474_RS12820 PF00912 Transglycosylase AM474_RS12830 PF04545 Sigma-70, region 4 AM474_RS12830 PF00140 Sigma-70 factor, region 1.2 AM474_RS12830 PF04542 Sigma-70 region 2 AM474_RS12835 PF18075 FtsX extracellular domain AM474_RS12840 PF00005 ABC transporter AM474_RS12845 PF02881 SRP54-type protein, helical bundle domain AM474_RS12845 PF00448 SRP54-type protein, GTPase domain AM474_RS12850 PF05193 Peptidase M16 inactive domain AM474_RS12850 PF00675 Insulinase (Peptidase family M16) AM474_RS12855 PF05193 Peptidase M16 inactive domain AM474_RS12870 PF00561 alpha/beta hydrolase fold AM474_RS12880 PF00440 Bacterial regulatory proteins, tetR family AM474_RS12885 PF00171 Aldehyde dehydrogenase family AM474_RS12895 PF00732 GMC oxidoreductase AM474_RS12895 PF05199 GMC oxidoreductase AM474_RS12900 PF01467 Cytidylyltransferase-like AM474_RS12905 PF00037 4Fe-4S binding domain AM474_RS12935 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM474_RS12935 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM474_RS12935 PF06827 Zinc finger found in FPG and IleRS AM474_RS12945 PF01965 DJ-1/PfpI family AM474_RS12950 PF10672 S-adenosylmethionine-dependent methyltransferase AM474_RS12950 PF17785 PUA-like domain AM474_RS12955 PF00920 Dehydratase family AM474_RS12960 PF00860 Permease family AM474_RS12965 PF12850 Calcineurin-like phosphoesterase superfamily domain AM474_RS12970 PF00186 Dihydrofolate reductase AM474_RS12985 PF03009 Glycerophosphoryl diester phosphodiesterase family AM474_RS13010 PF00303 Thymidylate synthase AM474_RS13015 PF01790 Prolipoprotein diacylglyceryl transferase AM474_RS13020 PF01925 Sulfite exporter TauE/SafE AM474_RS13030 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS13035 PF01590 GAF domain AM474_RS13035 PF05524 PEP-utilising enzyme, N-terminal AM474_RS13035 PF00391 PEP-utilising enzyme, mobile domain AM474_RS13035 PF02896 PEP-utilising enzyme, TIM barrel domain AM474_RS13040 PF00293 NUDIX domain AM474_RS13060 PF11066 Protein of unknown function (DUF2867) AM474_RS13060 PF13460 NAD(P)H-binding AM474_RS13070 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS13070 PF00585 C-terminal regulatory domain of Threonine dehydratase AM474_RS13075 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM474_RS13080 PF07411 Domain of unknown function (DUF1508) AM474_RS13085 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS13090 PF04389 Peptidase family M28 AM474_RS13095 PF06977 SdiA-regulated AM474_RS13105 PF00005 ABC transporter AM474_RS13105 PF08402 TOBE domain AM474_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS13120 PF01547 Bacterial extracellular solute-binding protein AM474_RS13125 PF00324 Amino acid permease AM474_RS13130 PF00850 Histone deacetylase domain AM474_RS13135 PF04076 Bacterial OB fold (BOF) protein AM474_RS13145 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS13150 PF02913 FAD linked oxidases, C-terminal domain AM474_RS13150 PF01565 FAD binding domain AM474_RS13155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM474_RS13155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM474_RS13165 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS13170 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS13220 PF01804 Penicillin amidase AM474_RS13225 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS13230 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS13235 PF00005 ABC transporter AM474_RS13235 PF08402 TOBE domain AM474_RS13240 PF13416 Bacterial extracellular solute-binding protein AM474_RS13245 PF13416 Bacterial extracellular solute-binding protein AM474_RS13250 PF00202 Aminotransferase class-III AM474_RS13255 PF00120 Glutamine synthetase, catalytic domain AM474_RS13260 PF07722 Peptidase C26 AM474_RS13265 PF00120 Glutamine synthetase, catalytic domain AM474_RS13270 PF13416 Bacterial extracellular solute-binding protein AM474_RS13285 PF04371 Porphyromonas-type peptidyl-arginine deiminase AM474_RS13290 PF03573 outer membrane porin, OprD family AM474_RS13295 PF08448 PAS fold AM474_RS13295 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS13305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS13305 PF03466 LysR substrate binding domain AM474_RS13310 PF00491 Arginase family AM474_RS13325 PF03707 Bacterial signalling protein N terminal repeat AM474_RS13325 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS13325 PF00563 EAL domain AM474_RS13340 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS13345 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS13350 PF00005 ABC transporter AM474_RS13350 PF12857 TOBE-like domain AM474_RS13365 PF01435 Peptidase family M48 AM474_RS13385 PF07690 Major Facilitator Superfamily AM474_RS13390 PF03466 LysR substrate binding domain AM474_RS13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS13405 PF02627 Carboxymuconolactone decarboxylase family AM474_RS13410 PF00155 Aminotransferase class I and II AM474_RS13410 PF00392 Bacterial regulatory proteins, gntR family AM474_RS13415 PF00072 Response regulator receiver domain AM474_RS13425 PF00202 Aminotransferase class-III AM474_RS13435 PF00171 Aldehyde dehydrogenase family AM474_RS13450 PF05638 Type VI secretion system effector, Hcp AM474_RS13455 PF13296 Putative type VI secretion system Rhs element Vgr AM474_RS13455 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM474_RS13455 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS13475 PF13296 Putative type VI secretion system Rhs element Vgr AM474_RS13475 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS13475 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM474_RS13505 PF06912 Protein of unknown function (DUF1275) AM474_RS13515 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM474_RS13520 PF01047 MarR family AM474_RS13535 PF03448 MgtE intracellular N domain AM474_RS13535 PF01769 Divalent cation transporter AM474_RS13535 PF00571 CBS domain AM474_RS13550 PF01494 FAD binding domain AM474_RS13555 PF07690 Major Facilitator Superfamily AM474_RS13560 PF01220 Dehydroquinase class II AM474_RS13565 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM474_RS13565 PF08501 Shikimate dehydrogenase substrate binding domain AM474_RS13570 PF00440 Bacterial regulatory proteins, tetR family AM474_RS13570 PF17938 Tetracyclin repressor-like, C-terminal domain AM474_RS13575 PF01261 Xylose isomerase-like TIM barrel AM474_RS13575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS13580 PF07690 Major Facilitator Superfamily AM474_RS13585 PF03573 outer membrane porin, OprD family AM474_RS13600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM474_RS13600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM474_RS13610 PF07690 Major Facilitator Superfamily AM474_RS13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS13620 PF03466 LysR substrate binding domain AM474_RS13625 PF02627 Carboxymuconolactone decarboxylase family AM474_RS13630 PF12146 Serine aminopeptidase, S33 AM474_RS13635 PF10397 Adenylosuccinate lyase C-terminus AM474_RS13635 PF00206 Lyase AM474_RS13640 PF00083 Sugar (and other) transporter AM474_RS13645 PF02803 Thiolase, C-terminal domain AM474_RS13645 PF00108 Thiolase, N-terminal domain AM474_RS13650 PF01144 Coenzyme A transferase AM474_RS13655 PF01144 Coenzyme A transferase AM474_RS13660 PF01381 Helix-turn-helix AM474_RS13660 PF08671 Anti-repressor SinI AM474_RS13665 PF00596 Class II Aldolase and Adducin N-terminal domain AM474_RS13670 PF00701 Dihydrodipicolinate synthetase family AM474_RS13680 PF00202 Aminotransferase class-III AM474_RS13685 PF00324 Amino acid permease AM474_RS13690 PF00171 Aldehyde dehydrogenase family AM474_RS13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS13705 PF03466 LysR substrate binding domain AM474_RS13720 PF00698 Acyl transferase domain AM474_RS13725 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AM474_RS13735 PF01039 Carboxyl transferase domain AM474_RS13740 PF06857 Malonate decarboxylase delta subunit (MdcD) AM474_RS13745 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM474_RS13750 PF16957 Malonate decarboxylase, alpha subunit, transporter AM474_RS13765 PF02472 Biopolymer transport protein ExbD/TolR AM474_RS13770 PF01618 MotA/TolQ/ExbB proton channel family AM474_RS13775 PF03544 Gram-negative bacterial TonB protein C-terminal AM474_RS13780 PF02233 NAD(P) transhydrogenase beta subunit AM474_RS13785 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM474_RS13790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM474_RS13790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM474_RS13795 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM474_RS13800 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM474_RS13805 PF07715 TonB-dependent Receptor Plug Domain AM474_RS13805 PF00593 TonB dependent receptor AM474_RS13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS13815 PF03466 LysR substrate binding domain AM474_RS13825 PF03573 outer membrane porin, OprD family AM474_RS13840 PF09084 NMT1/THI5 like AM474_RS13845 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS13850 PF00005 ABC transporter AM474_RS13855 PF00884 Sulfatase AM474_RS13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS13865 PF03466 LysR substrate binding domain AM474_RS13870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS13870 PF00672 HAMP domain AM474_RS13870 PF12729 Four helix bundle sensory module for signal transduction AM474_RS13875 PF00072 Response regulator receiver domain AM474_RS13880 PF01627 Hpt domain AM474_RS13880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS13880 PF02895 Signal transducing histidine kinase, homodimeric domain AM474_RS13880 PF09078 CheY binding AM474_RS13880 PF01584 CheW-like domain AM474_RS13885 PF01584 CheW-like domain AM474_RS13890 PF02203 Tar ligand binding domain homologue AM474_RS13890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS13890 PF00672 HAMP domain AM474_RS13895 PF01739 CheR methyltransferase, SAM binding domain AM474_RS13895 PF03705 CheR methyltransferase, all-alpha domain AM474_RS13900 PF03975 CheD chemotactic sensory transduction AM474_RS13905 PF01339 CheB methylesterase AM474_RS13905 PF00072 Response regulator receiver domain AM474_RS13920 PF09345 Domain of unknown function (DUF1987) AM474_RS13925 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS13930 PF01205 Uncharacterized protein family UPF0029 AM474_RS13935 PF00440 Bacterial regulatory proteins, tetR family AM474_RS13935 PF08362 YcdC-like protein, C-terminal region AM474_RS13940 PF00860 Permease family AM474_RS13960 PF03573 outer membrane porin, OprD family AM474_RS13975 PF03466 LysR substrate binding domain AM474_RS13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS13980 PF00873 AcrB/AcrD/AcrF family AM474_RS13990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS13995 PF01614 Bacterial transcriptional regulator AM474_RS13995 PF09339 IclR helix-turn-helix domain AM474_RS14005 PF00775 Dioxygenase AM474_RS14010 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM474_RS14010 PF00775 Dioxygenase AM474_RS14015 PF03466 LysR substrate binding domain AM474_RS14015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS14020 PF00593 TonB dependent receptor AM474_RS14020 PF07715 TonB-dependent Receptor Plug Domain AM474_RS14035 PF00962 Adenosine/AMP deaminase AM474_RS14040 PF03171 2OG-Fe(II) oxygenase superfamily AM474_RS14040 PF14226 non-haem dioxygenase in morphine synthesis N-terminal AM474_RS14045 PF02608 ABC transporter substrate-binding protein PnrA-like AM474_RS14060 PF03502 Nucleoside-specific channel-forming protein, Tsx AM474_RS14065 PF01156 Inosine-uridine preferring nucleoside hydrolase AM474_RS14070 PF01979 Amidohydrolase family AM474_RS14075 PF03976 Polyphosphate kinase 2 (PPK2) AM474_RS14080 PF13192 Thioredoxin domain AM474_RS14080 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS14085 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM474_RS14085 PF00578 AhpC/TSA family AM474_RS14095 PF02653 Branched-chain amino acid transport system / permease component AM474_RS14100 PF02653 Branched-chain amino acid transport system / permease component AM474_RS14105 PF00005 ABC transporter AM474_RS14115 PF01979 Amidohydrolase family AM474_RS14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS14120 PF03466 LysR substrate binding domain AM474_RS14125 PF00202 Aminotransferase class-III AM474_RS14130 PF07883 Cupin domain AM474_RS14135 PF00171 Aldehyde dehydrogenase family AM474_RS14140 PF00324 Amino acid permease AM474_RS14145 PF08274 PhnA Zinc-Ribbon AM474_RS14145 PF03831 PhnA domain AM474_RS14170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS14170 PF03466 LysR substrate binding domain AM474_RS14185 PF00392 Bacterial regulatory proteins, gntR family AM474_RS14185 PF07729 FCD domain AM474_RS14190 PF00375 Sodium:dicarboxylate symporter family AM474_RS14195 PF01323 DSBA-like thioredoxin domain AM474_RS14205 PF01638 HxlR-like helix-turn-helix AM474_RS14210 PF13673 Acetyltransferase (GNAT) domain AM474_RS14215 PF02630 SCO1/SenC AM474_RS14220 PF01040 UbiA prenyltransferase family AM474_RS14245 PF00510 Cytochrome c oxidase subunit III AM474_RS14250 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AM474_RS14255 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM474_RS14260 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM474_RS14260 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AM474_RS14275 PF00916 Sulfate permease family AM474_RS14275 PF01740 STAS domain AM474_RS14280 PF00484 Carbonic anhydrase AM474_RS14295 PF13665 Domain of unknown function (DUF4150) AM474_RS14295 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 AM474_RS14315 PF06715 Gp5 C-terminal repeat (3 copies) AM474_RS14315 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS14320 PF08786 DcrB AM474_RS14325 PF05488 PAAR motif AM474_RS14335 PF18660 Tsi6 AM474_RS14340 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS14345 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS14345 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS14345 PF17871 AAA lid domain AM474_RS14345 PF07724 AAA domain (Cdc48 subfamily) AM474_RS14355 PF05947 Type VI secretion system, TssF AM474_RS14360 PF04965 Gene 25-like lysozyme AM474_RS14365 PF07024 ImpE protein AM474_RS14370 PF05638 Type VI secretion system effector, Hcp AM474_RS14375 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS14380 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS14385 PF06812 ImpA, N-terminal, type VI secretion system AM474_RS14400 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM474_RS14405 PF00691 OmpA family AM474_RS14405 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM474_RS14410 PF14331 ImcF-related N-terminal domain AM474_RS14410 PF06761 Intracellular multiplication and human macrophage-killing AM474_RS14410 PF06744 Type VI secretion protein IcmF C-terminal AM474_RS14425 PF03793 PASTA domain AM474_RS14425 PF00069 Protein kinase domain AM474_RS14430 PF00005 ABC transporter AM474_RS14430 PF02687 FtsX-like permease family AM474_RS14430 PF12704 MacB-like periplasmic core domain AM474_RS14440 PF03781 Sulfatase-modifying factor enzyme 1 AM474_RS14450 PF04055 Radical SAM superfamily AM474_RS14455 PF09526 Probable metal-binding protein (DUF2387) AM474_RS14460 PF01432 Peptidase family M3 AM474_RS14465 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS14470 PF13419 Haloacid dehalogenase-like hydrolase AM474_RS14495 PF06649 Protein of unknown function (DUF1161) AM474_RS14500 PF02566 OsmC-like protein AM474_RS14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS14515 PF03466 LysR substrate binding domain AM474_RS14530 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AM474_RS14545 PF13537 Glutamine amidotransferase domain AM474_RS14545 PF00733 Asparagine synthase AM474_RS14565 PF05643 Putative bacterial lipoprotein (DUF799) AM474_RS14575 PF03783 Curli production assembly/transport component CsgG AM474_RS14580 PF03545 Yersinia virulence determinant (YopE) AM474_RS14580 PF03496 ADP-ribosyltransferase exoenzyme AM474_RS14585 PF13194 Domain of unknown function (DUF4010) AM474_RS14635 PF13332 Hemagglutinin repeat AM474_RS14635 PF05594 Haemagluttinin repeat AM474_RS14635 PF04829 Pre-toxin domain with VENN motif AM474_RS14650 PF05860 haemagglutination activity domain AM474_RS14650 PF13018 Extended Signal Peptide of Type V secretion system AM474_RS14650 PF13332 Hemagglutinin repeat AM474_RS14650 PF04829 Pre-toxin domain with VENN motif AM474_RS14650 PF04829 Pre-toxin domain with VENN motif AM474_RS14650 PF13332 Hemagglutinin repeat AM474_RS14650 PF05860 haemagglutination activity domain AM474_RS14650 PF13018 Extended Signal Peptide of Type V secretion system AM474_RS14655 PF08479 POTRA domain, ShlB-type AM474_RS14655 PF17287 POTRA domain AM474_RS14655 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM474_RS14665 PF07311 Dodecin AM474_RS14670 PF03466 LysR substrate binding domain AM474_RS14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS14675 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS14680 PF00290 Tryptophan synthase alpha chain AM474_RS14685 PF00196 Bacterial regulatory proteins, luxR family AM474_RS14685 PF00072 Response regulator receiver domain AM474_RS14700 PF03466 LysR substrate binding domain AM474_RS14700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS14705 PF12411 Choline sulfatase enzyme C terminal AM474_RS14705 PF00884 Sulfatase AM474_RS14710 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM474_RS14735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM474_RS14735 PF01488 Shikimate / quinate 5-dehydrogenase AM474_RS14735 PF08501 Shikimate dehydrogenase substrate binding domain AM474_RS14740 PF01218 Coproporphyrinogen III oxidase AM474_RS14745 PF00107 Zinc-binding dehydrogenase AM474_RS14745 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS14750 PF01300 Telomere recombination AM474_RS14755 PF17782 DprA winged helix domain AM474_RS14755 PF02481 DNA recombination-mediator protein A AM474_RS14760 PF01476 LysM domain AM474_RS14765 PF01327 Polypeptide deformylase AM474_RS14770 PF02911 Formyl transferase, C-terminal domain AM474_RS14770 PF00551 Formyl transferase AM474_RS14775 PF01029 NusB family AM474_RS14775 PF01189 16S rRNA methyltransferase RsmB/F AM474_RS14780 PF02254 TrkA-N domain AM474_RS14780 PF02080 TrkA-C domain AM474_RS14795 PF02592 Putative vitamin uptake transporter AM474_RS14810 PF03352 Methyladenine glycosylase AM474_RS14815 PF02091 Glycyl-tRNA synthetase alpha subunit AM474_RS14820 PF02092 Glycyl-tRNA synthetase beta subunit AM474_RS14820 PF05746 DALR anticodon binding domain AM474_RS14855 PF08463 EcoEI R protein C-terminal AM474_RS14855 PF00271 Helicase conserved C-terminal domain AM474_RS14855 PF04851 Type III restriction enzyme, res subunit AM474_RS14855 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AM474_RS14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS14860 PF00204 DNA gyrase B AM474_RS14860 PF01751 Toprim domain AM474_RS14860 PF00986 DNA gyrase B subunit, carboxyl terminus AM474_RS14860 PF18053 DNA gyrase B subunit insert domain AM474_RS14865 PF02463 RecF/RecN/SMC N terminal domain AM474_RS14870 PF02767 DNA polymerase III beta subunit, central domain AM474_RS14870 PF00712 DNA polymerase III beta subunit, N-terminal domain AM474_RS14870 PF02768 DNA polymerase III beta subunit, C-terminal domain AM474_RS14875 PF11638 DnaA N-terminal domain AM474_RS14875 PF00308 Bacterial dnaA protein AM474_RS14875 PF08299 Bacterial dnaA protein helix-turn-helix AM474_RS14880 PF00468 Ribosomal protein L34 AM474_RS14885 PF00825 Ribonuclease P AM474_RS14890 PF02096 60Kd inner membrane protein AM474_RS14890 PF14849 YidC periplasmic domain AM474_RS14895 PF10396 GTP-binding protein TrmE N-terminus AM474_RS14895 PF12631 MnmE helical domain AM474_RS14895 PF01926 50S ribosome-binding GTPase AM474_RS14915 PF01134 Glucose inhibited division protein A AM474_RS14915 PF13932 GidA associated domain AM474_RS14920 PF02527 rRNA small subunit methyltransferase G AM474_RS14925 PF13614 AAA domain AM474_RS14930 PF02195 ParB-like nuclease domain AM474_RS14930 PF17762 HTH domain found in ParB protein AM474_RS14935 PF03899 ATP synthase I chain AM474_RS14940 PF00119 ATP synthase A chain AM474_RS14945 PF00137 ATP synthase subunit C AM474_RS14950 PF00430 ATP synthase B/B' CF(0) AM474_RS14955 PF00213 ATP synthase delta (OSCP) subunit AM474_RS14960 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM474_RS14960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM474_RS14960 PF00306 ATP synthase alpha/beta chain, C terminal domain AM474_RS14965 PF00231 ATP synthase AM474_RS14970 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM474_RS14970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM474_RS14975 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM474_RS14975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM474_RS14980 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS14980 PF12804 MobA-like NTP transferase domain AM474_RS14990 PF08220 DeoR-like helix-turn-helix domain AM474_RS14990 PF00455 DeoR C terminal sensor domain AM474_RS14995 PF01380 SIS domain AM474_RS15000 PF07690 Major Facilitator Superfamily AM474_RS15015 PF16868 NMT1-like family AM474_RS15035 PF01979 Amidohydrolase family AM474_RS15045 PF02649 Type I GTP cyclohydrolase folE2 AM474_RS15050 PF01520 N-acetylmuramoyl-L-alanine amidase AM474_RS15060 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM474_RS15065 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM474_RS15065 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM474_RS15080 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM474_RS15080 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM474_RS15085 PF03544 Gram-negative bacterial TonB protein C-terminal AM474_RS15090 PF00083 Sugar (and other) transporter AM474_RS15095 PF02254 TrkA-N domain AM474_RS15095 PF00999 Sodium/hydrogen exchanger family AM474_RS15130 PF00202 Aminotransferase class-III AM474_RS15135 PF00120 Glutamine synthetase, catalytic domain AM474_RS15150 PF03061 Thioesterase superfamily AM474_RS15155 PF00999 Sodium/hydrogen exchanger family AM474_RS15155 PF02254 TrkA-N domain AM474_RS15165 PF08543 Phosphomethylpyrimidine kinase AM474_RS15175 PF00905 Penicillin binding protein transpeptidase domain AM474_RS15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS15185 PF02743 Cache domain AM474_RS15185 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS15190 PF00158 Sigma-54 interaction domain AM474_RS15190 PF02954 Bacterial regulatory protein, Fis family AM474_RS15190 PF00072 Response regulator receiver domain AM474_RS15195 PF00324 Amino acid permease AM474_RS15220 PF03180 NLPA lipoprotein AM474_RS15225 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS15230 PF00005 ABC transporter AM474_RS15230 PF09383 NIL domain AM474_RS15240 PF00950 ABC 3 transport family AM474_RS15245 PF00005 ABC transporter AM474_RS15250 PF01475 Ferric uptake regulator family AM474_RS15255 PF01297 Zinc-uptake complex component A periplasmic AM474_RS15270 PF01636 Phosphotransferase enzyme family AM474_RS15280 PF01367 5'-3' exonuclease, C-terminal SAM fold AM474_RS15280 PF01612 3'-5' exonuclease AM474_RS15280 PF00476 DNA polymerase family A AM474_RS15280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM474_RS15285 PF01926 50S ribosome-binding GTPase AM474_RS15290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS15295 PF00034 Cytochrome c AM474_RS15300 PF01323 DSBA-like thioredoxin domain AM474_RS15310 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS15315 PF01914 MarC family integral membrane protein AM474_RS15320 PF01510 N-acetylmuramoyl-L-alanine amidase AM474_RS15325 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AM474_RS15325 PF08448 PAS fold AM474_RS15325 PF00672 HAMP domain AM474_RS15325 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS15330 PF00158 Sigma-54 interaction domain AM474_RS15330 PF02954 Bacterial regulatory protein, Fis family AM474_RS15330 PF00072 Response regulator receiver domain AM474_RS15350 PF00375 Sodium:dicarboxylate symporter family AM474_RS15355 PF07670 Nucleoside recognition AM474_RS15365 PF07690 Major Facilitator Superfamily AM474_RS15380 PF00675 Insulinase (Peptidase family M16) AM474_RS15380 PF05193 Peptidase M16 inactive domain AM474_RS15385 PF02690 Na+/Pi-cotransporter AM474_RS15405 PF00472 RF-1 domain AM474_RS15410 PF03741 Integral membrane protein TerC family AM474_RS15415 PF03600 Citrate transporter AM474_RS15425 PF03547 Membrane transport protein AM474_RS15465 PF01757 Acyltransferase family AM474_RS15485 PF16363 GDP-mannose 4,6 dehydratase AM474_RS15490 PF16363 GDP-mannose 4,6 dehydratase AM474_RS15495 PF00483 Nucleotidyl transferase AM474_RS15495 PF01050 Mannose-6-phosphate isomerase AM474_RS15505 PF00005 ABC transporter AM474_RS15515 PF00534 Glycosyl transferases group 1 AM474_RS15515 PF13579 Glycosyl transferase 4-like domain AM474_RS15520 PF13439 Glycosyltransferase Family 4 AM474_RS15520 PF00534 Glycosyl transferases group 1 AM474_RS15530 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM474_RS15530 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM474_RS15535 PF00892 EamA-like transporter family AM474_RS15540 PF00580 UvrD/REP helicase N-terminal domain AM474_RS15540 PF13361 UvrD-like helicase C-terminal domain AM474_RS15545 PF03707 Bacterial signalling protein N terminal repeat AM474_RS15545 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS15545 PF00563 EAL domain AM474_RS15560 PF01136 Peptidase family U32 AM474_RS15560 PF16325 Peptidase family U32 C-terminal domain AM474_RS15565 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM474_RS15565 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM474_RS15570 PF01380 SIS domain AM474_RS15570 PF01418 Helix-turn-helix domain, rpiR family AM474_RS15580 PF03466 LysR substrate binding domain AM474_RS15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS15585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM474_RS15585 PF02785 Biotin carboxylase C-terminal domain AM474_RS15585 PF00289 Biotin carboxylase, N-terminal domain AM474_RS15590 PF00682 HMGL-like AM474_RS15590 PF02436 Conserved carboxylase domain AM474_RS15590 PF00364 Biotin-requiring enzyme AM474_RS15595 PF03222 Tryptophan/tyrosine permease family AM474_RS15610 PF00392 Bacterial regulatory proteins, gntR family AM474_RS15610 PF00155 Aminotransferase class I and II AM474_RS15615 PF04143 Sulphur transport AM474_RS15625 PF10415 Fumarase C C-terminus AM474_RS15625 PF00206 Lyase AM474_RS15630 PF03466 LysR substrate binding domain AM474_RS15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS15635 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS15635 PF00107 Zinc-binding dehydrogenase AM474_RS15645 PF00731 AIR carboxylase AM474_RS15650 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM474_RS15650 PF02222 ATP-grasp domain AM474_RS15665 PF01263 Aldose 1-epimerase AM474_RS15670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM474_RS15670 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS15675 PF00551 Formyl transferase AM474_RS15685 PF01571 Aminomethyltransferase folate-binding domain AM474_RS15685 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM474_RS15685 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS15685 PF17806 Sarcosine oxidase A3 domain AM474_RS15695 PF01266 FAD dependent oxidoreductase AM474_RS15700 PF00464 Serine hydroxymethyltransferase AM474_RS15710 PF01212 Beta-eliminating lyase AM474_RS15720 PF00970 Oxidoreductase FAD-binding domain AM474_RS15720 PF00042 Globin AM474_RS15720 PF00175 Oxidoreductase NAD-binding domain AM474_RS15725 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM474_RS15725 PF00355 Rieske [2Fe-2S] domain AM474_RS15760 PF13443 Cro/C1-type HTH DNA-binding domain AM474_RS15775 PF01012 Electron transfer flavoprotein domain AM474_RS15775 PF00766 Electron transfer flavoprotein FAD-binding domain AM474_RS15780 PF13183 4Fe-4S dicluster domain AM474_RS15780 PF02754 Cysteine-rich domain AM474_RS15785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS15795 PF01244 Membrane dipeptidase (Peptidase family M19) AM474_RS15805 PF13091 PLD-like domain AM474_RS15815 PF01042 Endoribonuclease L-PSP AM474_RS15825 PF07687 Peptidase dimerisation domain AM474_RS15825 PF01546 Peptidase family M20/M25/M40 AM474_RS15830 PF01965 DJ-1/PfpI family AM474_RS15830 PF12833 Helix-turn-helix domain AM474_RS15835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM474_RS15840 PF05853 beta-keto acid cleavage enzyme AM474_RS15845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM474_RS15845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM474_RS15855 PF07859 alpha/beta hydrolase fold AM474_RS15860 PF03601 Conserved hypothetical protein 698 AM474_RS15865 PF03466 LysR substrate binding domain AM474_RS15865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS15875 PF01965 DJ-1/PfpI family AM474_RS15875 PF12833 Helix-turn-helix domain AM474_RS15880 PF03313 Serine dehydratase alpha chain AM474_RS15880 PF03315 Serine dehydratase beta chain AM474_RS15885 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM474_RS15890 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS15895 PF00571 CBS domain AM474_RS15895 PF00005 ABC transporter AM474_RS15900 PF02028 BCCT, betaine/carnitine/choline family transporter AM474_RS15910 PF13977 BetI-type transcriptional repressor, C-terminal AM474_RS15910 PF00440 Bacterial regulatory proteins, tetR family AM474_RS15915 PF00171 Aldehyde dehydrogenase family AM474_RS15920 PF00732 GMC oxidoreductase AM474_RS15920 PF05199 GMC oxidoreductase AM474_RS15925 PF03061 Thioesterase superfamily AM474_RS15930 PF07690 Major Facilitator Superfamily AM474_RS15960 PF12849 PBP superfamily domain AM474_RS15965 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS15970 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS15975 PF00005 ABC transporter AM474_RS15980 PF01895 PhoU domain AM474_RS15985 PF00072 Response regulator receiver domain AM474_RS15990 PF01476 LysM domain AM474_RS15990 PF08525 Opacity-associated protein A N-terminal motif AM474_RS15990 PF01551 Peptidase family M23 AM474_RS15995 PF00571 CBS domain AM474_RS15995 PF03471 Transporter associated domain AM474_RS15995 PF01595 Cyclin M transmembrane N-terminal domain AM474_RS16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS16000 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS16000 PF00989 PAS fold AM474_RS16000 PF11808 Phosphate regulon sensor protein PhoR AM474_RS16005 PF00486 Transcriptional regulatory protein, C terminal AM474_RS16005 PF00072 Response regulator receiver domain AM474_RS16015 PF01040 UbiA prenyltransferase family AM474_RS16020 PF04345 Chorismate lyase AM474_RS16025 PF00392 Bacterial regulatory proteins, gntR family AM474_RS16025 PF07729 FCD domain AM474_RS16030 PF01565 FAD binding domain AM474_RS16030 PF02913 FAD linked oxidases, C-terminal domain AM474_RS16035 PF01565 FAD binding domain AM474_RS16040 PF02754 Cysteine-rich domain AM474_RS16040 PF13183 4Fe-4S dicluster domain AM474_RS16045 PF03928 Haem-degrading AM474_RS16050 PF00301 Rubredoxin AM474_RS16055 PF00301 Rubredoxin AM474_RS16060 PF18113 Rubredoxin binding C-terminal domain AM474_RS16060 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS16070 PF00216 Bacterial DNA-binding protein AM474_RS16085 PF00270 DEAD/DEAH box helicase AM474_RS16085 PF17191 RecG wedge domain AM474_RS16085 PF00271 Helicase conserved C-terminal domain AM474_RS16090 PF03466 LysR substrate binding domain AM474_RS16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS16100 PF00072 Response regulator receiver domain AM474_RS16100 PF12833 Helix-turn-helix domain AM474_RS16115 PF01042 Endoribonuclease L-PSP AM474_RS16120 PF13291 ACT domain AM474_RS16120 PF04607 Region found in RelA / SpoT proteins AM474_RS16120 PF02824 TGS domain AM474_RS16125 PF01192 RNA polymerase Rpb6 AM474_RS16130 PF00625 Guanylate kinase AM474_RS16135 PF08340 Domain of unknown function (DUF1732) AM474_RS16135 PF03755 YicC-like family, N-terminal region AM474_RS16140 PF01138 3' exoribonuclease family, domain 1 AM474_RS16140 PF03725 3' exoribonuclease family, domain 2 AM474_RS16150 PF03372 Endonuclease/Exonuclease/phosphatase family AM474_RS16155 PF00156 Phosphoribosyl transferase domain AM474_RS16170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS16175 PF01565 FAD binding domain AM474_RS16175 PF04030 D-arabinono-1,4-lactone oxidase AM474_RS16190 PF12833 Helix-turn-helix domain AM474_RS16190 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS16195 PF00696 Amino acid kinase family AM474_RS16200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM474_RS16200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM474_RS16200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM474_RS16200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM474_RS16205 PF00692 dUTPase AM474_RS16210 PF04127 DNA / pantothenate metabolism flavoprotein AM474_RS16210 PF02441 Flavoprotein AM474_RS16215 PF04002 RadC-like JAB domain AM474_RS16225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM474_RS16230 PF00830 Ribosomal L28 family AM474_RS16235 PF00471 Ribosomal protein L33 AM474_RS16245 PF00202 Aminotransferase class-III AM474_RS16250 PF00171 Aldehyde dehydrogenase family AM474_RS16255 PF07690 Major Facilitator Superfamily AM474_RS16260 PF13091 PLD-like domain AM474_RS16265 PF01266 FAD dependent oxidoreductase AM474_RS16270 PF01037 Lrp/AsnC ligand binding domain AM474_RS16280 PF13617 YnbE-like lipoprotein AM474_RS16290 PF01266 FAD dependent oxidoreductase AM474_RS16295 PF01042 Endoribonuclease L-PSP AM474_RS16300 PF00842 Alanine racemase, C-terminal domain AM474_RS16300 PF01168 Alanine racemase, N-terminal domain AM474_RS16305 PF07883 Cupin domain AM474_RS16305 PF01381 Helix-turn-helix AM474_RS16310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS16315 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM474_RS16315 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM474_RS16320 PF00156 Phosphoribosyl transferase domain AM474_RS16325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS16325 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS16325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS16330 PF00580 UvrD/REP helicase N-terminal domain AM474_RS16330 PF13361 UvrD-like helicase C-terminal domain AM474_RS16335 PF03707 Bacterial signalling protein N terminal repeat AM474_RS16335 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS16335 PF00563 EAL domain AM474_RS16340 PF01554 MatE AM474_RS16345 PF03466 LysR substrate binding domain AM474_RS16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS16355 PF02028 BCCT, betaine/carnitine/choline family transporter AM474_RS16360 PF01078 Magnesium chelatase, subunit ChlI AM474_RS16360 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM474_RS16365 PF04380 Membrane fusogenic activity AM474_RS16370 PF00543 Nitrogen regulatory protein P-II AM474_RS16375 PF00909 Ammonium Transporter Family AM474_RS16380 PF01894 Uncharacterised protein family UPF0047 AM474_RS16400 PF00392 Bacterial regulatory proteins, gntR family AM474_RS16400 PF00155 Aminotransferase class I and II AM474_RS16415 PF00589 Phage integrase family AM474_RS16415 PF02899 Phage integrase, N-terminal SAM-like domain AM474_RS16425 PF01678 Diaminopimelate epimerase AM474_RS16430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM474_RS16430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM474_RS16435 PF13627 Prokaryotic lipoprotein-attachment site AM474_RS16440 PF01491 Frataxin-like domain AM474_RS16450 PF01272 Transcription elongation factor, GreA/GreB, C-term AM474_RS16450 PF14760 Rnk N-terminus AM474_RS16460 PF01295 Adenylate cyclase, class-I AM474_RS16460 PF12633 Adenylate cyclase NT domain AM474_RS16480 PF01544 CorA-like Mg2+ transporter protein AM474_RS16485 PF05638 Type VI secretion system effector, Hcp AM474_RS16490 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS16505 PF14698 Argininosuccinate lyase C-terminal AM474_RS16505 PF00206 Lyase AM474_RS16510 PF07694 5TMR of 5TMR-LYT AM474_RS16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS16510 PF06580 Histidine kinase AM474_RS16515 PF04397 LytTr DNA-binding domain AM474_RS16515 PF00072 Response regulator receiver domain AM474_RS16520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM474_RS16520 PF03900 Porphobilinogen deaminase, C-terminal domain AM474_RS16525 PF02602 Uroporphyrinogen-III synthase HemD AM474_RS16540 PF02600 Disulfide bond formation protein DsbB AM474_RS16545 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM474_RS16550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM474_RS16550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM474_RS16565 PF00005 ABC transporter AM474_RS16565 PF12848 ABC transporter AM474_RS16575 PF03741 Integral membrane protein TerC family AM474_RS16580 PF01810 LysE type translocator AM474_RS16585 PF03239 Iron permease FTR1 family AM474_RS16590 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM474_RS16595 PF03061 Thioesterase superfamily AM474_RS16605 PF09335 SNARE associated Golgi protein AM474_RS16610 PF00490 Delta-aminolevulinic acid dehydratase AM474_RS16615 PF17941 Polyphosphate kinase C-terminal domain 1 AM474_RS16615 PF13089 Polyphosphate kinase N-terminal domain AM474_RS16615 PF02503 Polyphosphate kinase middle domain AM474_RS16615 PF13090 Polyphosphate kinase C-terminal domain 2 AM474_RS16620 PF02541 Ppx/GppA phosphatase family AM474_RS16625 PF00085 Thioredoxin AM474_RS16630 PF07497 Rho termination factor, RNA-binding domain AM474_RS16630 PF07498 Rho termination factor, N-terminal domain AM474_RS16630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM474_RS16635 PF01757 Acyltransferase family AM474_RS16640 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM474_RS16645 PF00175 Oxidoreductase NAD-binding domain AM474_RS16650 PF07690 Major Facilitator Superfamily AM474_RS16655 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS16655 PF08990 Erythronolide synthase docking AM474_RS16655 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS16655 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS16655 PF00698 Acyl transferase domain AM474_RS16655 PF16197 Ketoacyl-synthetase C-terminal extension AM474_RS16655 PF08659 KR domain AM474_RS16655 PF14765 Polyketide synthase dehydratase AM474_RS16655 PF00550 Phosphopantetheine attachment site AM474_RS16665 PF13533 Biotin-lipoyl like AM474_RS16670 PF00005 ABC transporter AM474_RS16685 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM474_RS16695 PF05164 Cell division protein ZapA AM474_RS16705 PF03695 Uncharacterised protein family (UPF0149) AM474_RS16710 PF05195 Aminopeptidase P, N-terminal domain AM474_RS16710 PF00557 Metallopeptidase family M24 AM474_RS16715 PF01494 FAD binding domain AM474_RS16725 PF01494 FAD binding domain AM474_RS16740 PF03466 LysR substrate binding domain AM474_RS16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS16750 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS16755 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM474_RS16755 PF01571 Aminomethyltransferase folate-binding domain AM474_RS16760 PF01597 Glycine cleavage H-protein AM474_RS16765 PF02347 Glycine cleavage system P-protein AM474_RS16765 PF01212 Beta-eliminating lyase AM474_RS16780 PF00437 Type II/IV secretion system protein AM474_RS16780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM474_RS16785 PF01928 CYTH domain AM474_RS16790 PF01865 Protein of unknown function DUF47 AM474_RS16795 PF01384 Phosphate transporter family AM474_RS16800 PF01546 Peptidase family M20/M25/M40 AM474_RS16800 PF07687 Peptidase dimerisation domain AM474_RS16805 PF01914 MarC family integral membrane protein AM474_RS16810 PF00696 Amino acid kinase family AM474_RS16810 PF00583 Acetyltransferase (GNAT) family AM474_RS16815 PF04262 Glutamate-cysteine ligase AM474_RS16825 PF16921 Tex protein YqgF-like domain AM474_RS16825 PF09371 Tex-like protein N-terminal domain AM474_RS16825 PF00575 S1 RNA binding domain AM474_RS16825 PF17674 HHH domain AM474_RS16830 PF00072 Response regulator receiver domain AM474_RS16830 PF00486 Transcriptional regulatory protein, C terminal AM474_RS16835 PF00672 HAMP domain AM474_RS16835 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS16835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS16840 PF02016 LD-carboxypeptidase N-terminal domain AM474_RS16840 PF17676 LD-carboxypeptidase C-terminal domain AM474_RS16845 PF08443 RimK-like ATP-grasp domain AM474_RS16845 PF18030 RimK PreATP-grasp domain AM474_RS16850 PF08443 RimK-like ATP-grasp domain AM474_RS16850 PF18030 RimK PreATP-grasp domain AM474_RS16855 PF01479 S4 domain AM474_RS16865 PF01430 Hsp33 protein AM474_RS16875 PF01293 Phosphoenolpyruvate carboxykinase AM474_RS16885 PF00881 Nitroreductase family AM474_RS16890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS16890 PF03466 LysR substrate binding domain AM474_RS16895 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS16895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM474_RS16895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM474_RS16900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS16900 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM474_RS16900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS16900 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS16905 PF00465 Iron-containing alcohol dehydrogenase AM474_RS16910 PF03061 Thioesterase superfamily AM474_RS16915 PF01817 Chorismate mutase type II AM474_RS16920 PF02599 Global regulator protein family AM474_RS16935 PF01568 Molydopterin dinucleotide binding domain AM474_RS16935 PF00384 Molybdopterin oxidoreductase AM474_RS16940 PF02634 FdhD/NarQ family AM474_RS16945 PF03466 LysR substrate binding domain AM474_RS16945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS16950 PF01476 LysM domain AM474_RS16950 PF04972 BON domain AM474_RS16955 PF13419 Haloacid dehalogenase-like hydrolase AM474_RS16960 PF00293 NUDIX domain AM474_RS16965 PF00459 Inositol monophosphatase family AM474_RS16970 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS16970 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS16975 PF00696 Amino acid kinase family AM474_RS16980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM474_RS16980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM474_RS16990 PF13520 Amino acid permease AM474_RS16995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM474_RS17000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM474_RS17005 PF03480 Bacterial extracellular solute-binding protein, family 7 AM474_RS17010 PF00158 Sigma-54 interaction domain AM474_RS17010 PF00072 Response regulator receiver domain AM474_RS17010 PF02954 Bacterial regulatory protein, Fis family AM474_RS17015 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS17015 PF02743 Cache domain AM474_RS17020 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AM474_RS17025 PF00483 Nucleotidyl transferase AM474_RS17030 PF04321 RmlD substrate binding domain AM474_RS17035 PF16363 GDP-mannose 4,6 dehydratase AM474_RS17045 PF07690 Major Facilitator Superfamily AM474_RS17050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS17050 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS17055 PF02321 Outer membrane efflux protein AM474_RS17060 PF01047 MarR family AM474_RS17070 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS17075 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS17080 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS17085 PF00005 ABC transporter AM474_RS17105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM474_RS17105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM474_RS17110 PF04362 Bacterial Fe(2+) trafficking AM474_RS17115 PF10576 Iron-sulfur binding domain of endonuclease III AM474_RS17115 PF14815 NUDIX domain AM474_RS17115 PF00730 HhH-GPD superfamily base excision DNA repair protein AM474_RS17115 PF00633 Helix-hairpin-helix motif AM474_RS17125 PF01266 FAD dependent oxidoreductase AM474_RS17140 PF00475 Imidazoleglycerol-phosphate dehydratase AM474_RS17145 PF00117 Glutamine amidotransferase class-I AM474_RS17155 PF00977 Histidine biosynthesis protein AM474_RS17160 PF00977 Histidine biosynthesis protein AM474_RS17185 PF04748 Divergent polysaccharide deacetylase AM474_RS17190 PF13180 PDZ domain AM474_RS17190 PF03572 Peptidase family S41 AM474_RS17195 PF01551 Peptidase family M23 AM474_RS17205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM474_RS17205 PF01676 Metalloenzyme superfamily AM474_RS17215 PF00462 Glutaredoxin AM474_RS17220 PF02556 Preprotein translocase subunit SecB AM474_RS17225 PF00588 SpoU rRNA Methylase family AM474_RS17240 PF00158 Sigma-54 interaction domain AM474_RS17240 PF02954 Bacterial regulatory protein, Fis family AM474_RS17240 PF00072 Response regulator receiver domain AM474_RS17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS17245 PF00989 PAS fold AM474_RS17245 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS17260 PF00924 Mechanosensitive ion channel AM474_RS17270 PF03951 Glutamine synthetase, beta-Grasp domain AM474_RS17270 PF00120 Glutamine synthetase, catalytic domain AM474_RS17280 PF02568 Thiamine biosynthesis protein (ThiI) AM474_RS17280 PF02926 THUMP domain AM474_RS17285 PF03144 Elongation factor Tu domain 2 AM474_RS17285 PF00009 Elongation factor Tu GTP binding domain AM474_RS17285 PF00679 Elongation factor G C-terminus AM474_RS17290 PF09278 MerR, DNA binding AM474_RS17290 PF00376 MerR family regulatory protein AM474_RS17310 PF03797 Autotransporter beta-domain AM474_RS17310 PF00657 GDSL-like Lipase/Acylhydrolase AM474_RS17315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS17320 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM474_RS17335 PF08212 Lipocalin-like domain AM474_RS17340 PF01979 Amidohydrolase family AM474_RS17345 PF00392 Bacterial regulatory proteins, gntR family AM474_RS17345 PF07702 UTRA domain AM474_RS17350 PF05962 HutD AM474_RS17370 PF17391 Urocanase N-terminal domain AM474_RS17370 PF01175 Urocanase Rossmann-like domain AM474_RS17370 PF17392 Urocanase C-terminal domain AM474_RS17375 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM474_RS17380 PF00221 Aromatic amino acid lyase AM474_RS17385 PF00324 Amino acid permease AM474_RS17395 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS17400 PF00571 CBS domain AM474_RS17400 PF00005 ABC transporter AM474_RS17405 PF00221 Aromatic amino acid lyase AM474_RS17410 PF01979 Amidohydrolase family AM474_RS17420 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS17425 PF13091 PLD-like domain AM474_RS17425 PF13396 Phospholipase_D-nuclease N-terminal AM474_RS17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS17445 PF03466 LysR substrate binding domain AM474_RS17450 PF01266 FAD dependent oxidoreductase AM474_RS17455 PF01042 Endoribonuclease L-PSP AM474_RS17460 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS17465 PF00293 NUDIX domain AM474_RS17470 PF00561 alpha/beta hydrolase fold AM474_RS17475 PF02580 D-Tyr-tRNA(Tyr) deacylase AM474_RS17480 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM474_RS17485 PF00535 Glycosyl transferase family 2 AM474_RS17490 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS17495 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS17500 PF00005 ABC transporter AM474_RS17505 PF03682 Uncharacterised protein family (UPF0158) AM474_RS17510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS17510 PF16591 Helical bimodular sensor domain AM474_RS17510 PF00672 HAMP domain AM474_RS17520 PF00902 Sec-independent protein translocase protein (TatC) AM474_RS17525 PF02416 mttA/Hcf106 family AM474_RS17530 PF02416 mttA/Hcf106 family AM474_RS17535 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM474_RS17540 PF01502 Phosphoribosyl-AMP cyclohydrolase AM474_RS17545 PF03109 ABC1 family AM474_RS17555 PF01209 ubiE/COQ5 methyltransferase family AM474_RS17580 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AM474_RS17585 PF00561 alpha/beta hydrolase fold AM474_RS17595 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AM474_RS17610 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS17610 PF07724 AAA domain (Cdc48 subfamily) AM474_RS17615 PF00227 Proteasome subunit AM474_RS17625 PF00750 tRNA synthetases class I (R) AM474_RS17625 PF05746 DALR anticodon binding domain AM474_RS17625 PF03485 Arginyl tRNA synthetase N terminal domain AM474_RS17630 PF18074 Primosomal protein N C-terminal domain AM474_RS17630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM474_RS17630 PF00271 Helicase conserved C-terminal domain AM474_RS17630 PF17764 3′ DNA-binding domain (3′BD) AM474_RS17630 PF00270 DEAD/DEAH box helicase AM474_RS17635 PF01197 Ribosomal protein L31 AM474_RS17650 PF00390 Malic enzyme, N-terminal domain AM474_RS17650 PF03949 Malic enzyme, NAD binding domain AM474_RS17655 PF00905 Penicillin binding protein transpeptidase domain AM474_RS17655 PF00912 Transglycosylase AM474_RS17655 PF17092 Penicillin-binding protein OB-like domain AM474_RS17660 PF11104 Type IV pilus assembly protein PilM; AM474_RS17665 PF05137 Fimbrial assembly protein (PilN) AM474_RS17670 PF04350 Pilus assembly protein, PilO AM474_RS17675 PF04351 Pilus assembly protein, PilP AM474_RS17795 PF04233 Phage Mu protein F like protein AM474_RS17805 PF03237 Terminase-like family AM474_RS17835 PF01464 Transglycosylase SLT domain AM474_RS17835 PF14718 Soluble lytic murein transglycosylase L domain AM474_RS17900 PF02687 FtsX-like permease family AM474_RS17900 PF12704 MacB-like periplasmic core domain AM474_RS17900 PF00005 ABC transporter AM474_RS17960 PF01202 Shikimate kinase AM474_RS17965 PF01761 3-dehydroquinate synthase AM474_RS17975 PF01645 Conserved region in glutamate synthase AM474_RS17975 PF04898 Glutamate synthase central domain AM474_RS17975 PF00310 Glutamine amidotransferases class-II AM474_RS17975 PF01493 GXGXG motif AM474_RS17980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS17980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM474_RS17985 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM474_RS18000 PF00106 short chain dehydrogenase AM474_RS18005 PF07690 Major Facilitator Superfamily AM474_RS18010 PF03466 LysR substrate binding domain AM474_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS18015 PF13614 AAA domain AM474_RS18030 PF01053 Cys/Met metabolism PLP-dependent enzyme AM474_RS18035 PF01925 Sulfite exporter TauE/SafE AM474_RS18040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM474_RS18045 PF12795 Mechanosensitive ion channel porin domain AM474_RS18045 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM474_RS18045 PF00924 Mechanosensitive ion channel AM474_RS18050 PF03471 Transporter associated domain AM474_RS18050 PF02080 TrkA-C domain AM474_RS18050 PF00999 Sodium/hydrogen exchanger family AM474_RS18060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS18060 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM474_RS18060 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS18060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS18065 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM474_RS18070 PF01625 Peptide methionine sulfoxide reductase AM474_RS18075 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS18075 PF00563 EAL domain AM474_RS18075 PF03707 Bacterial signalling protein N terminal repeat AM474_RS18085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM474_RS18085 PF00364 Biotin-requiring enzyme AM474_RS18085 PF02817 e3 binding domain AM474_RS18095 PF00456 Transketolase, thiamine diphosphate binding domain AM474_RS18095 PF17831 Pyruvate dehydrogenase E1 component middle domain AM474_RS18100 PF03710 Glutamate-ammonia ligase adenylyltransferase AM474_RS18100 PF08335 GlnD PII-uridylyltransferase AM474_RS18105 PF01063 Amino-transferase class IV AM474_RS18110 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM474_RS18115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM474_RS18120 PF13439 Glycosyltransferase Family 4 AM474_RS18120 PF00534 Glycosyl transferases group 1 AM474_RS18145 PF02543 Carbamoyltransferase N-terminus AM474_RS18145 PF16861 Carbamoyltransferase C-terminus AM474_RS18150 PF00534 Glycosyl transferases group 1 AM474_RS18170 PF00535 Glycosyl transferase family 2 AM474_RS18175 PF04932 O-Antigen ligase AM474_RS18185 PF00005 ABC transporter AM474_RS18185 PF00664 ABC transporter transmembrane region AM474_RS18190 PF01467 Cytidylyltransferase-like AM474_RS18190 PF00294 pfkB family carbohydrate kinase AM474_RS18195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS18195 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS18195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS18200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS18200 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS18200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS18210 PF00248 Aldo/keto reductase family AM474_RS18215 PF01266 FAD dependent oxidoreductase AM474_RS18220 PF00893 Small Multidrug Resistance protein AM474_RS18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS18225 PF03466 LysR substrate binding domain AM474_RS18230 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM474_RS18240 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS18240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS18255 PF00486 Transcriptional regulatory protein, C terminal AM474_RS18255 PF00072 Response regulator receiver domain AM474_RS18265 PF01627 Hpt domain AM474_RS18265 PF00072 Response regulator receiver domain AM474_RS18265 PF17149 Periplasmic sensor domain found in signal transduction proteins AM474_RS18265 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS18265 PF00672 HAMP domain AM474_RS18270 PF00324 Amino acid permease AM474_RS18275 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS18280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS18280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS18280 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS18285 PF08442 ATP-grasp domain AM474_RS18285 PF00549 CoA-ligase AM474_RS18290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS18290 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS18290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS18295 PF00155 Aminotransferase class I and II AM474_RS18300 PF02525 Flavodoxin-like fold AM474_RS18305 PF02321 Outer membrane efflux protein AM474_RS18310 PF13667 ThiC-associated domain AM474_RS18310 PF01964 Radical SAM ThiC family AM474_RS18320 PF00293 NUDIX domain AM474_RS18330 PF00149 Calcineurin-like phosphoesterase AM474_RS18335 PF05728 Uncharacterised protein family (UPF0227) AM474_RS18340 PF00204 DNA gyrase B AM474_RS18340 PF00986 DNA gyrase B subunit, carboxyl terminus AM474_RS18340 PF01751 Toprim domain AM474_RS18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS18355 PF00521 DNA gyrase/topoisomerase IV, subunit A AM474_RS18355 PF03989 DNA gyrase C-terminal domain, beta-propeller AM474_RS18365 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM474_RS18380 PF03707 Bacterial signalling protein N terminal repeat AM474_RS18380 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS18380 PF00563 EAL domain AM474_RS18395 PF02666 Phosphatidylserine decarboxylase AM474_RS18400 PF00581 Rhodanese-like domain AM474_RS18410 PF01618 MotA/TolQ/ExbB proton channel family AM474_RS18415 PF00691 OmpA family AM474_RS18415 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM474_RS18420 PF03193 RsgA GTPase AM474_RS18425 PF00929 Exonuclease AM474_RS18430 PF08331 Domain of unknown function (DUF1730) AM474_RS18435 PF03853 YjeF-related protein N-terminus AM474_RS18435 PF01256 Carbohydrate kinase AM474_RS18440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM474_RS18445 PF01520 N-acetylmuramoyl-L-alanine amidase AM474_RS18445 PF11741 AMIN domain AM474_RS18450 PF01119 DNA mismatch repair protein, C-terminal domain AM474_RS18450 PF08676 MutL C terminal dimerisation domain AM474_RS18460 PF17209 Hfq protein AM474_RS18465 PF16360 GTP-binding GTPase Middle Region AM474_RS18465 PF13167 GTP-binding GTPase N-terminal AM474_RS18465 PF01926 50S ribosome-binding GTPase AM474_RS18470 PF01145 SPFH domain / Band 7 family AM474_RS18475 PF01145 SPFH domain / Band 7 family AM474_RS18485 PF13393 Histidyl-tRNA synthetase AM474_RS18490 PF00709 Adenylosuccinate synthetase AM474_RS18505 PF17876 Cold shock domain AM474_RS18505 PF08461 Ribonuclease R winged-helix domain AM474_RS18505 PF00773 RNB domain AM474_RS18505 PF00575 S1 RNA binding domain AM474_RS18505 PF08206 Ribonuclease B OB domain AM474_RS18510 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM474_RS18510 PF00588 SpoU rRNA Methylase family AM474_RS18515 PF01250 Ribosomal protein S6 AM474_RS18520 PF01084 Ribosomal protein S18 AM474_RS18530 PF03948 Ribosomal protein L9, C-terminal domain AM474_RS18530 PF01281 Ribosomal protein L9, N-terminal domain AM474_RS18535 PF00772 DnaB-like helicase N terminal domain AM474_RS18535 PF03796 DnaB-like helicase C terminal domain AM474_RS18540 PF00842 Alanine racemase, C-terminal domain AM474_RS18540 PF01168 Alanine racemase, N-terminal domain AM474_RS18545 PF00232 Glycosyl hydrolase family 1 AM474_RS18550 PF13188 PAS domain AM474_RS18550 PF00563 EAL domain AM474_RS18550 PF03707 Bacterial signalling protein N terminal repeat AM474_RS18550 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS18560 PF08497 Radical SAM N-terminal AM474_RS18560 PF04055 Radical SAM superfamily AM474_RS18560 PF11842 Domain of unknown function (DUF3362) AM474_RS18565 PF04168 A predicted alpha-helical domain with a conserved ER motif. AM474_RS18565 PF14403 Circularly permuted ATP-grasp type 2 AM474_RS18570 PF01841 Transglutaminase-like superfamily AM474_RS18570 PF08379 Bacterial transglutaminase-like N-terminal region AM474_RS18575 PF05552 Conserved TM helix AM474_RS18575 PF00924 Mechanosensitive ion channel AM474_RS18580 PF01551 Peptidase family M23 AM474_RS18580 PF01476 LysM domain AM474_RS18585 PF03641 Possible lysine decarboxylase AM474_RS18590 PF00127 Copper binding proteins, plastocyanin/azurin family AM474_RS18600 PF02540 NAD synthase AM474_RS18605 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM474_RS18605 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM474_RS18615 PF01467 Cytidylyltransferase-like AM474_RS18625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS18625 PF12729 Four helix bundle sensory module for signal transduction AM474_RS18625 PF00672 HAMP domain AM474_RS18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS18630 PF03466 LysR substrate binding domain AM474_RS18635 PF13458 Periplasmic binding protein AM474_RS18640 PF02653 Branched-chain amino acid transport system / permease component AM474_RS18645 PF11862 Domain of unknown function (DUF3382) AM474_RS18645 PF02653 Branched-chain amino acid transport system / permease component AM474_RS18650 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM474_RS18650 PF00005 ABC transporter AM474_RS18655 PF00005 ABC transporter AM474_RS18660 PF02423 Ornithine cyclodeaminase/mu-crystallin family AM474_RS18665 PF00106 short chain dehydrogenase AM474_RS18675 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS18675 PF00175 Oxidoreductase NAD-binding domain AM474_RS18680 PF00355 Rieske [2Fe-2S] domain AM474_RS18685 PF07690 Major Facilitator Superfamily AM474_RS18690 PF03466 LysR substrate binding domain AM474_RS18690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS18695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS18695 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS18695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS18700 PF07690 Major Facilitator Superfamily AM474_RS18705 PF00171 Aldehyde dehydrogenase family AM474_RS18710 PF03573 outer membrane porin, OprD family AM474_RS18720 PF08281 Sigma-70, region 4 AM474_RS18720 PF04542 Sigma-70 region 2 AM474_RS18725 PF16220 Domain of unknown function (DUF4880) AM474_RS18725 PF04773 FecR protein AM474_RS18730 PF04955 HupE / UreJ protein AM474_RS18735 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM474_RS18740 PF01730 UreF AM474_RS18745 PF02814 UreE urease accessory protein, N-terminal domain AM474_RS18745 PF05194 UreE urease accessory protein, C-terminal domain AM474_RS18750 PF00440 Bacterial regulatory proteins, tetR family AM474_RS18755 PF00175 Oxidoreductase NAD-binding domain AM474_RS18755 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS18755 PF00970 Oxidoreductase FAD-binding domain AM474_RS18760 PF00487 Fatty acid desaturase AM474_RS18770 PF00672 HAMP domain AM474_RS18770 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS18775 PF00072 Response regulator receiver domain AM474_RS18775 PF00486 Transcriptional regulatory protein, C terminal AM474_RS18785 PF01292 Prokaryotic cytochrome b561 AM474_RS18790 PF00174 Oxidoreductase molybdopterin binding domain AM474_RS18800 PF00210 Ferritin-like domain AM474_RS18805 PF05170 AsmA family AM474_RS18810 PF13411 MerR HTH family regulatory protein AM474_RS18835 PF00012 Hsp70 protein AM474_RS18855 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM474_RS18870 PF00449 Urease alpha-subunit, N-terminal domain AM474_RS18870 PF01979 Amidohydrolase family AM474_RS18875 PF00699 Urease beta subunit AM474_RS18885 PF00547 Urease, gamma subunit AM474_RS18890 PF01774 UreD urease accessory protein AM474_RS18900 PF00005 ABC transporter AM474_RS18905 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM474_RS18905 PF00005 ABC transporter AM474_RS18910 PF02653 Branched-chain amino acid transport system / permease component AM474_RS18915 PF02653 Branched-chain amino acid transport system / permease component AM474_RS18920 PF13458 Periplasmic binding protein AM474_RS18925 PF01914 MarC family integral membrane protein AM474_RS18930 PF00072 Response regulator receiver domain AM474_RS18930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM474_RS18930 PF00672 HAMP domain AM474_RS18930 PF01627 Hpt domain AM474_RS18930 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS18935 PF02843 Phosphoribosylglycinamide synthetase, C domain AM474_RS18935 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM474_RS18935 PF02844 Phosphoribosylglycinamide synthetase, N domain AM474_RS18940 PF02142 MGS-like domain AM474_RS18940 PF01808 AICARFT/IMPCHase bienzyme AM474_RS18945 PF02954 Bacterial regulatory protein, Fis family AM474_RS18950 PF01207 Dihydrouridine synthase (Dus) AM474_RS18970 PF00289 Biotin carboxylase, N-terminal domain AM474_RS18970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM474_RS18970 PF02785 Biotin carboxylase C-terminal domain AM474_RS18975 PF00364 Biotin-requiring enzyme AM474_RS18980 PF01220 Dehydroquinase class II AM474_RS18985 PF11412 Disulphide bond corrector protein DsbC AM474_RS18985 PF02683 Cytochrome C biogenesis protein transmembrane region AM474_RS18990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS18995 PF00072 Response regulator receiver domain AM474_RS18995 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS18995 PF00563 EAL domain AM474_RS19010 PF00293 NUDIX domain AM474_RS19015 PF01253 Translation initiation factor SUI1 AM474_RS19020 PF17944 Arginine decarboxylase C-terminal helical extension AM474_RS19020 PF17810 Arginine decarboxylase helical bundle domain AM474_RS19020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM474_RS19030 PF07715 TonB-dependent Receptor Plug Domain AM474_RS19030 PF00593 TonB dependent receptor AM474_RS19035 PF03059 Nicotianamine synthase protein AM474_RS19040 PF10100 Staphylopine dehydrogenase AM474_RS19045 PF00892 EamA-like transporter family AM474_RS19050 PF03006 Haemolysin-III related AM474_RS19055 PF00106 short chain dehydrogenase AM474_RS19070 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS19070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM474_RS19080 PF00797 N-acetyltransferase AM474_RS19090 PF00689 Cation transporting ATPase, C-terminus AM474_RS19090 PF00690 Cation transporter/ATPase, N-terminus AM474_RS19105 PF02690 Na+/Pi-cotransporter AM474_RS19115 PF01554 MatE AM474_RS19125 PF00535 Glycosyl transferase family 2 AM474_RS19150 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS19150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS19155 PF00561 alpha/beta hydrolase fold AM474_RS19160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM474_RS19160 PF00384 Molybdopterin oxidoreductase AM474_RS19160 PF01568 Molydopterin dinucleotide binding domain AM474_RS19165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM474_RS19165 PF00384 Molybdopterin oxidoreductase AM474_RS19165 PF01568 Molydopterin dinucleotide binding domain AM474_RS19170 PF09163 Formate dehydrogenase N, transmembrane AM474_RS19170 PF13247 4Fe-4S dicluster domain AM474_RS19175 PF01292 Prokaryotic cytochrome b561 AM474_RS19180 PF04216 Protein involved in formate dehydrogenase formation AM474_RS19185 PF03841 L-seryl-tRNA selenium transferase AM474_RS19185 PF12390 Selenocysteine synthase N terminal AM474_RS19190 PF03144 Elongation factor Tu domain 2 AM474_RS19190 PF09107 Elongation factor SelB, winged helix AM474_RS19190 PF09106 Elongation factor SelB, winged helix AM474_RS19190 PF00009 Elongation factor Tu GTP binding domain AM474_RS19200 PF00202 Aminotransferase class-III AM474_RS19205 PF13520 Amino acid permease AM474_RS19240 PF04229 GrpB protein AM474_RS19245 PF01597 Glycine cleavage H-protein AM474_RS19265 PF03009 Glycerophosphoryl diester phosphodiesterase family AM474_RS19275 PF13847 Methyltransferase domain AM474_RS19290 PF12833 Helix-turn-helix domain AM474_RS19290 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS19300 PF00108 Thiolase, N-terminal domain AM474_RS19300 PF02803 Thiolase, C-terminal domain AM474_RS19305 PF01037 Lrp/AsnC ligand binding domain AM474_RS19310 PF00892 EamA-like transporter family AM474_RS19320 PF00072 Response regulator receiver domain AM474_RS19330 PF00892 EamA-like transporter family AM474_RS19340 PF09278 MerR, DNA binding AM474_RS19340 PF00376 MerR family regulatory protein AM474_RS19345 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS19345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS19350 PF00072 Response regulator receiver domain AM474_RS19350 PF00486 Transcriptional regulatory protein, C terminal AM474_RS19360 PF17284 Spermidine synthase tetramerisation domain AM474_RS19365 PF02675 S-adenosylmethionine decarboxylase AM474_RS19375 PF01070 FMN-dependent dehydrogenase AM474_RS19380 PF02652 L-lactate permease AM474_RS19385 PF07729 FCD domain AM474_RS19385 PF00392 Bacterial regulatory proteins, gntR family AM474_RS19390 PF01668 SmpB protein AM474_RS19395 PF03364 Polyketide cyclase / dehydrase and lipid transport AM474_RS19400 PF03658 RnfH family Ubiquitin AM474_RS19405 PF04355 SmpA / OmlA family AM474_RS19410 PF01475 Ferric uptake regulator family AM474_RS19415 PF02463 RecF/RecN/SMC N terminal domain AM474_RS19425 PF01025 GrpE AM474_RS19430 PF00012 Hsp70 protein AM474_RS19435 PF00684 DnaJ central domain AM474_RS19435 PF01556 DnaJ C terminal domain AM474_RS19435 PF00226 DnaJ domain AM474_RS19440 PF01113 Dihydrodipicolinate reductase, N-terminus AM474_RS19440 PF05173 Dihydrodipicolinate reductase, C-terminus AM474_RS19445 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM474_RS19445 PF00117 Glutamine amidotransferase class-I AM474_RS19450 PF01810 LysE type translocator AM474_RS19455 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM474_RS19455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM474_RS19455 PF02142 MGS-like domain AM474_RS19460 PF01272 Transcription elongation factor, GreA/GreB, C-term AM474_RS19460 PF03449 Transcription elongation factor, N-terminal AM474_RS19470 PF01985 CRS1 / YhbY (CRM) domain AM474_RS19475 PF01728 FtsJ-like methyltransferase AM474_RS19480 PF01434 Peptidase family M41 AM474_RS19480 PF17862 AAA+ lid domain AM474_RS19480 PF06480 FtsH Extracellular AM474_RS19480 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS19485 PF00809 Pterin binding enzyme AM474_RS19490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM474_RS19490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM474_RS19490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM474_RS19490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM474_RS19495 PF00121 Triosephosphate isomerase AM474_RS19500 PF03840 Preprotein translocase SecG subunit AM474_RS19515 PF17384 RimP C-terminal SH3 domain AM474_RS19515 PF02576 RimP N-terminal domain AM474_RS19520 PF13184 NusA-like KH domain AM474_RS19520 PF00575 S1 RNA binding domain AM474_RS19520 PF08529 NusA N-terminal domain AM474_RS19525 PF04760 Translation initiation factor IF-2, N-terminal region AM474_RS19525 PF08364 Bacterial translation initiation factor IF-2 associated region AM474_RS19525 PF11987 Translation-initiation factor 2 AM474_RS19525 PF00009 Elongation factor Tu GTP binding domain AM474_RS19530 PF02033 Ribosome-binding factor A AM474_RS19535 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM474_RS19535 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM474_RS19535 PF09157 Pseudouridine synthase II TruB, C-terminal AM474_RS19540 PF00312 Ribosomal protein S15 AM474_RS19550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM474_RS19550 PF00013 KH domain AM474_RS19550 PF00575 S1 RNA binding domain AM474_RS19550 PF01138 3' exoribonuclease family, domain 1 AM474_RS19550 PF03725 3' exoribonuclease family, domain 2 AM474_RS19555 PF04972 BON domain AM474_RS19560 PF05532 CsbD-like AM474_RS19585 PF16177 Acetyl-coenzyme A synthetase N-terminus AM474_RS19585 PF13193 AMP-binding enzyme C-terminal domain AM474_RS19585 PF00501 AMP-binding enzyme AM474_RS19590 PF00342 Phosphoglucose isomerase AM474_RS19595 PF02261 Aspartate decarboxylase AM474_RS19600 PF02569 Pantoate-beta-alanine ligase AM474_RS19605 PF02548 Ketopantoate hydroxymethyltransferase AM474_RS19610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM474_RS19615 PF01743 Poly A polymerase head domain AM474_RS19615 PF12627 Probable RNA and SrmB- binding site of polymerase A AM474_RS19615 PF12626 Polymerase A arginine-rich C-terminus AM474_RS19620 PF00872 Transposase, Mutator family AM474_RS19625 PF00072 Response regulator receiver domain AM474_RS19625 PF02954 Bacterial regulatory protein, Fis family AM474_RS19625 PF00158 Sigma-54 interaction domain AM474_RS19630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS19630 PF08447 PAS fold AM474_RS19630 PF00989 PAS fold AM474_RS19630 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS19640 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM474_RS19645 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM474_RS19650 PF00155 Aminotransferase class I and II AM474_RS19655 PF17746 SfsA N-terminal OB domain AM474_RS19655 PF03749 Sugar fermentation stimulation protein RE domain AM474_RS19660 PF05958 tRNA (Uracil-5-)-methyltransferase AM474_RS19665 PF00860 Permease family AM474_RS19675 PF04228 Putative neutral zinc metallopeptidase AM474_RS19680 PF02567 Phenazine biosynthesis-like protein AM474_RS19685 PF00155 Aminotransferase class I and II AM474_RS19710 PF00593 TonB dependent receptor AM474_RS19710 PF07715 TonB-dependent Receptor Plug Domain AM474_RS19715 PF05171 Haemin-degrading HemS.ChuX domain AM474_RS19720 PF01497 Periplasmic binding protein AM474_RS19725 PF01032 FecCD transport family AM474_RS19730 PF00005 ABC transporter AM474_RS19740 PF00027 Cyclic nucleotide-binding domain AM474_RS19760 PF14814 Bifunctional transglycosylase second domain AM474_RS19760 PF00912 Transglycosylase AM474_RS19760 PF00905 Penicillin binding protein transpeptidase domain AM474_RS19770 PF04287 tRNA pseudouridine synthase C AM474_RS19780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS19780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS19780 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS19785 PF10369 Small subunit of acetolactate synthase AM474_RS19790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM474_RS19790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM474_RS19795 PF01066 CDP-alcohol phosphatidyltransferase AM474_RS19800 PF00174 Oxidoreductase molybdopterin binding domain AM474_RS19805 PF01794 Ferric reductase like transmembrane component AM474_RS19835 PF04403 Paraquat-inducible protein A AM474_RS19840 PF04403 Paraquat-inducible protein A AM474_RS19845 PF02470 MlaD protein AM474_RS19850 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS19855 PF01547 Bacterial extracellular solute-binding protein AM474_RS19900 PF00583 Acetyltransferase (GNAT) family AM474_RS19910 PF00484 Carbonic anhydrase AM474_RS19915 PF00593 TonB dependent receptor AM474_RS19915 PF07715 TonB-dependent Receptor Plug Domain AM474_RS19925 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AM474_RS19930 PF01381 Helix-turn-helix AM474_RS19940 PF01926 50S ribosome-binding GTPase AM474_RS19940 PF06071 Protein of unknown function (DUF933) AM474_RS19945 PF01195 Peptidyl-tRNA hydrolase AM474_RS19950 PF01386 Ribosomal L25p family AM474_RS19950 PF14693 Ribosomal protein TL5, C-terminal domain AM474_RS19955 PF14572 Phosphoribosyl synthetase-associated domain AM474_RS19955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM474_RS19965 PF08544 GHMP kinases C terminal AM474_RS19965 PF00288 GHMP kinases N terminal domain AM474_RS19970 PF03550 Outer membrane lipoprotein LolB AM474_RS19980 PF01488 Shikimate / quinate 5-dehydrogenase AM474_RS19980 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM474_RS19980 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM474_RS19985 PF03462 PCRF domain AM474_RS19985 PF00472 RF-1 domain AM474_RS19990 PF05175 Methyltransferase small domain AM474_RS19990 PF17827 PrmC N-terminal domain AM474_RS19995 PF00899 ThiF family AM474_RS20000 PF01177 Asp/Glu/Hydantoin racemase AM474_RS20005 PF09411 Lipid A 3-O-deacylase (PagL) AM474_RS20010 PF00875 DNA photolyase AM474_RS20010 PF03441 FAD binding domain of DNA photolyase AM474_RS20015 PF13411 MerR HTH family regulatory protein AM474_RS20025 PF01593 Flavin containing amine oxidoreductase AM474_RS20030 PF01370 NAD dependent epimerase/dehydratase family AM474_RS20030 PF08338 Domain of unknown function (DUF1731) AM474_RS20035 PF00762 Ferrochelatase AM474_RS20075 PF00860 Permease family AM474_RS20085 PF00156 Phosphoribosyl transferase domain AM474_RS20110 PF06039 Malate:quinone oxidoreductase (Mqo) AM474_RS20145 PF02308 MgtC family AM474_RS20150 PF02586 SOS response associated peptidase (SRAP) AM474_RS20155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS20155 PF00672 HAMP domain AM474_RS20160 PF01435 Peptidase family M48 AM474_RS20175 PF01169 Uncharacterized protein family UPF0016 AM474_RS20180 PF00324 Amino acid permease AM474_RS20185 PF08468 Methyltransferase small domain N-terminal AM474_RS20185 PF05175 Methyltransferase small domain AM474_RS20190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM474_RS20190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM474_RS20200 PF08479 POTRA domain, ShlB-type AM474_RS20200 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM474_RS20200 PF17287 POTRA domain AM474_RS20220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM474_RS20225 PF01799 [2Fe-2S] binding domain AM474_RS20225 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS20230 PF00034 Cytochrome c AM474_RS20230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS20235 PF02625 XdhC and CoxI family AM474_RS20235 PF13478 XdhC Rossmann domain AM474_RS20245 PF05175 Methyltransferase small domain AM474_RS20250 PF03480 Bacterial extracellular solute-binding protein, family 7 AM474_RS20255 PF00970 Oxidoreductase FAD-binding domain AM474_RS20255 PF00175 Oxidoreductase NAD-binding domain AM474_RS20260 PF01741 Large-conductance mechanosensitive channel, MscL AM474_RS20270 PF06628 Catalase-related immune-responsive AM474_RS20270 PF00199 Catalase AM474_RS20290 PF18073 Rubredoxin metal binding domain AM474_RS20295 PF07238 PilZ domain AM474_RS20305 PF02554 Carbon starvation protein CstA AM474_RS20305 PF13722 5TM C-terminal transporter carbon starvation CstA AM474_RS20310 PF04328 Selenoprotein, putative AM474_RS20315 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM474_RS20315 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM474_RS20325 PF00464 Serine hydroxymethyltransferase AM474_RS20330 PF00563 EAL domain AM474_RS20330 PF03707 Bacterial signalling protein N terminal repeat AM474_RS20330 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS20340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS20340 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS20345 PF00873 AcrB/AcrD/AcrF family AM474_RS20350 PF02321 Outer membrane efflux protein AM474_RS20365 PF00005 ABC transporter AM474_RS20365 PF12848 ABC transporter AM474_RS20370 PF02687 FtsX-like permease family AM474_RS20370 PF00005 ABC transporter AM474_RS20370 PF12704 MacB-like periplasmic core domain AM474_RS20375 PF02687 FtsX-like permease family AM474_RS20375 PF12704 MacB-like periplasmic core domain AM474_RS20375 PF00005 ABC transporter AM474_RS20400 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM474_RS20400 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM474_RS20405 PF03150 Di-haem cytochrome c peroxidase AM474_RS20405 PF00034 Cytochrome c AM474_RS20415 PF01137 RNA 3'-terminal phosphate cyclase AM474_RS20415 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AM474_RS20420 PF10127 RNA repair pathway DNA polymerase beta family AM474_RS20425 PF01139 tRNA-splicing ligase RtcB AM474_RS20440 PF06956 Regulator of RNA terminal phosphate cyclase AM474_RS20440 PF00158 Sigma-54 interaction domain AM474_RS20465 PF05362 Lon protease (S16) C-terminal proteolytic domain AM474_RS20465 PF13654 AAA domain AM474_RS20475 PF03350 Uncharacterized protein family, UPF0114 AM474_RS20485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM474_RS20485 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM474_RS20490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS20490 PF00034 Cytochrome c AM474_RS20500 PF00348 Polyprenyl synthetase AM474_RS20505 PF00829 Ribosomal prokaryotic L21 protein AM474_RS20510 PF01016 Ribosomal L27 protein AM474_RS20515 PF01926 50S ribosome-binding GTPase AM474_RS20515 PF01018 GTP1/OBG AM474_RS20520 PF00696 Amino acid kinase family AM474_RS20520 PF01472 PUA domain AM474_RS20525 PF05981 CreA protein AM474_RS20530 PF01649 Ribosomal protein S20 AM474_RS20535 PF03023 Lipid II flippase MurJ AM474_RS20540 PF06574 FAD synthetase AM474_RS20540 PF01687 Riboflavin kinase AM474_RS20545 PF00133 tRNA synthetases class I (I, L, M and V) AM474_RS20545 PF08264 Anticodon-binding domain of tRNA AM474_RS20545 PF06827 Zinc finger found in FPG and IleRS AM474_RS20550 PF01252 Signal peptidase (SPase) II AM474_RS20555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM474_RS20560 PF02401 LytB protein AM474_RS20565 PF07963 Prokaryotic N-terminal methylation motif AM474_RS20565 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AM474_RS20575 PF05567 Neisseria PilC beta-propeller domain AM474_RS20605 PF01266 FAD dependent oxidoreductase AM474_RS20610 PF00158 Sigma-54 interaction domain AM474_RS20610 PF00072 Response regulator receiver domain AM474_RS20610 PF02954 Bacterial regulatory protein, Fis family AM474_RS20615 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS20615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS20625 PF13525 Outer membrane lipoprotein AM474_RS20630 PF00849 RNA pseudouridylate synthase AM474_RS20630 PF01479 S4 domain AM474_RS20635 PF02578 Multi-copper polyphenol oxidoreductase laccase AM474_RS20640 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS20640 PF02861 Clp amino terminal domain, pathogenicity island component AM474_RS20640 PF17871 AAA lid domain AM474_RS20640 PF07724 AAA domain (Cdc48 subfamily) AM474_RS20640 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS20660 PF05860 haemagglutination activity domain AM474_RS20665 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM474_RS20665 PF08479 POTRA domain, ShlB-type AM474_RS20670 PF00872 Transposase, Mutator family AM474_RS20675 PF03969 AFG1-like ATPase AM474_RS20680 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS20720 PF03884 DNA gyrase inhibitor YacG AM474_RS20725 PF01121 Dephospho-CoA kinase AM474_RS20730 PF06750 Bacterial Peptidase A24 N-terminal domain AM474_RS20730 PF01478 Type IV leader peptidase family AM474_RS20735 PF00482 Type II secretion system (T2SS), protein F AM474_RS20740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM474_RS20740 PF00437 Type II/IV secretion system protein AM474_RS20745 PF07963 Prokaryotic N-terminal methylation motif AM474_RS20745 PF00114 Pilin (bacterial filament) AM474_RS20760 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM474_RS20760 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM474_RS20770 PF01510 N-acetylmuramoyl-L-alanine amidase AM474_RS20780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS20780 PF00672 HAMP domain AM474_RS20780 PF02743 Cache domain AM474_RS20785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM474_RS20785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM474_RS20795 PF00884 Sulfatase AM474_RS20805 PF13640 2OG-Fe(II) oxygenase superfamily AM474_RS20805 PF18331 PKHD-type hydroxylase C-terminal domain AM474_RS20810 PF07715 TonB-dependent Receptor Plug Domain AM474_RS20810 PF00593 TonB dependent receptor AM474_RS20815 PF00258 Flavodoxin AM474_RS20815 PF00667 FAD binding domain AM474_RS20815 PF00175 Oxidoreductase NAD-binding domain AM474_RS20825 PF03746 LamB/YcsF family AM474_RS20835 PF02626 Carboxyltransferase domain, subdomain A and B AM474_RS20840 PF01037 Lrp/AsnC ligand binding domain AM474_RS20845 PF01810 LysE type translocator AM474_RS20850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM474_RS20850 PF00005 ABC transporter AM474_RS20855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM474_RS20855 PF00005 ABC transporter AM474_RS20860 PF12911 N-terminal TM domain of oligopeptide transport permease C AM474_RS20860 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS20865 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS20870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM474_RS20885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM474_RS20895 PF01321 Creatinase/Prolidase N-terminal domain AM474_RS20895 PF00557 Metallopeptidase family M24 AM474_RS20900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM474_RS20905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM474_RS20915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS20915 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS20920 PF00072 Response regulator receiver domain AM474_RS20925 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) AM474_RS20930 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) AM474_RS20935 PF06672 Protein of unknown function (DUF1175) AM474_RS20940 PF01835 MG2 domain AM474_RS20940 PF07703 Alpha-2-macroglobulin bait region domain AM474_RS20940 PF00207 Alpha-2-macroglobulin family AM474_RS20945 PF08486 Stage II sporulation protein AM474_RS20945 PF10062 Predicted secreted protein (DUF2300) AM474_RS20950 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) AM474_RS20955 PF02627 Carboxymuconolactone decarboxylase family AM474_RS20960 PF03330 Lytic transglycolase AM474_RS20965 PF02934 GatB/GatE catalytic domain AM474_RS20965 PF02637 GatB domain AM474_RS20970 PF01425 Amidase AM474_RS20975 PF02686 Glu-tRNAGln amidotransferase C subunit AM474_RS20985 PF04085 rod shape-determining protein MreC AM474_RS20995 PF02545 Maf-like protein AM474_RS21000 PF10150 Ribonuclease E/G family AM474_RS21000 PF00575 S1 RNA binding domain AM474_RS21010 PF00795 Carbon-nitrogen hydrolase AM474_RS21015 PF01523 Putative modulator of DNA gyrase AM474_RS21020 PF04751 Protein of unknown function (DUF615) AM474_RS21025 PF01523 Putative modulator of DNA gyrase AM474_RS21035 PF00206 Lyase AM474_RS21035 PF10415 Fumarase C C-terminus AM474_RS21045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM474_RS21045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM474_RS21050 PF02535 ZIP Zinc transporter AM474_RS21055 PF00381 PTS HPr component phosphorylation site AM474_RS21060 PF03668 P-loop ATPase protein family AM474_RS21065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM474_RS21070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM474_RS21075 PF04963 Sigma-54 factor, core binding domain AM474_RS21075 PF04552 Sigma-54, DNA binding domain AM474_RS21075 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM474_RS21080 PF00005 ABC transporter AM474_RS21080 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM474_RS21100 PF00571 CBS domain AM474_RS21100 PF01380 SIS domain AM474_RS21105 PF00005 ABC transporter AM474_RS21110 PF02405 Permease MlaE AM474_RS21115 PF02470 MlaD protein AM474_RS21120 PF05494 MlaC protein AM474_RS21135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM474_RS21140 PF01634 ATP phosphoribosyltransferase AM474_RS21145 PF00815 Histidinol dehydrogenase AM474_RS21150 PF00155 Aminotransferase class I and II AM474_RS21155 PF13180 PDZ domain AM474_RS21160 PF01784 NIF3 (NGG1p interacting factor 3) AM474_RS21165 PF13406 Transglycosylase SLT domain AM474_RS21170 PF01507 Phosphoadenosine phosphosulfate reductase family AM474_RS21175 PF00009 Elongation factor Tu GTP binding domain AM474_RS21185 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM474_RS21190 PF00579 tRNA synthetases class I (W and Y) AM474_RS21195 PF03969 AFG1-like ATPase AM474_RS21210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS21210 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS21210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS21215 PF00248 Aldo/keto reductase family AM474_RS21220 PF00572 Ribosomal protein L13 AM474_RS21225 PF00380 Ribosomal protein S9/S16 AM474_RS21230 PF00355 Rieske [2Fe-2S] domain AM474_RS21230 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AM474_RS21235 PF00032 Cytochrome b(C-terminal)/b6/petD AM474_RS21235 PF00033 Cytochrome b/b6/petB AM474_RS21240 PF02167 Cytochrome C1 family AM474_RS21245 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS21245 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS21250 PF04386 Stringent starvation protein B AM474_RS21255 PF04972 BON domain AM474_RS21260 PF13580 SIS domain AM474_RS21265 PF02021 Uncharacterised protein family UPF0102 AM474_RS21270 PF04348 LppC putative lipoprotein AM474_RS21275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM474_RS21285 PF02381 MraZ protein, putative antitoxin-like AM474_RS21290 PF01795 MraW methylase family AM474_RS21295 PF04999 Cell division protein FtsL AM474_RS21300 PF03717 Penicillin-binding Protein dimerisation domain AM474_RS21300 PF00905 Penicillin binding protein transpeptidase domain AM474_RS21305 PF01225 Mur ligase family, catalytic domain AM474_RS21305 PF08245 Mur ligase middle domain AM474_RS21305 PF02875 Mur ligase family, glutamate ligase domain AM474_RS21310 PF08245 Mur ligase middle domain AM474_RS21310 PF02875 Mur ligase family, glutamate ligase domain AM474_RS21310 PF01225 Mur ligase family, catalytic domain AM474_RS21315 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM474_RS21315 PF00953 Glycosyl transferase family 4 AM474_RS21320 PF02875 Mur ligase family, glutamate ligase domain AM474_RS21320 PF08245 Mur ligase middle domain AM474_RS21325 PF01098 Cell cycle protein AM474_RS21330 PF04101 Glycosyltransferase family 28 C-terminal domain AM474_RS21330 PF03033 Glycosyltransferase family 28 N-terminal domain AM474_RS21335 PF08245 Mur ligase middle domain AM474_RS21335 PF02875 Mur ligase family, glutamate ligase domain AM474_RS21335 PF01225 Mur ligase family, catalytic domain AM474_RS21340 PF07478 D-ala D-ala ligase C-terminus AM474_RS21340 PF01820 D-ala D-ala ligase N-terminus AM474_RS21345 PF08478 POTRA domain, FtsQ-type AM474_RS21345 PF03799 Cell division protein FtsQ AM474_RS21350 PF02491 SHS2 domain inserted in FTSA AM474_RS21355 PF00091 Tubulin/FtsZ family, GTPase domain AM474_RS21355 PF12327 FtsZ family, C-terminal domain AM474_RS21360 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM474_RS21370 PF10145 Phage-related minor tail protein AM474_RS21370 PF01464 Transglycosylase SLT domain AM474_RS21370 PF01551 Peptidase family M23 AM474_RS21380 PF02810 SEC-C motif AM474_RS21380 PF07516 SecA Wing and Scaffold domain AM474_RS21380 PF01043 SecA preprotein cross-linking domain AM474_RS21380 PF07517 SecA DEAD-like domain AM474_RS21385 PF01960 ArgJ family AM474_RS21390 PF13417 Glutathione S-transferase, N-terminal domain AM474_RS21390 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS21395 PF00293 NUDIX domain AM474_RS21400 PF01923 Cobalamin adenosyltransferase AM474_RS21405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS21405 PF00072 Response regulator receiver domain AM474_RS21405 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS21405 PF13188 PAS domain AM474_RS21405 PF08448 PAS fold AM474_RS21410 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM474_RS21410 PF02558 Ketopantoate reductase PanE/ApbA AM474_RS21415 PF00072 Response regulator receiver domain AM474_RS21420 PF04461 Protein of unknown function (DUF520) AM474_RS21425 PF00924 Mechanosensitive ion channel AM474_RS21425 PF05552 Conserved TM helix AM474_RS21430 PF07690 Major Facilitator Superfamily AM474_RS21460 PF04186 FxsA cytoplasmic membrane protein AM474_RS21465 PF00166 Chaperonin 10 Kd subunit AM474_RS21470 PF00118 TCP-1/cpn60 chaperonin family AM474_RS21480 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM474_RS21495 PF00486 Transcriptional regulatory protein, C terminal AM474_RS21495 PF00072 Response regulator receiver domain AM474_RS21500 PF00672 HAMP domain AM474_RS21500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS21500 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS21520 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM474_RS21520 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM474_RS21525 PF00873 AcrB/AcrD/AcrF family AM474_RS21530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS21555 PF04011 LemA family AM474_RS21565 PF03707 Bacterial signalling protein N terminal repeat AM474_RS21565 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS21565 PF00563 EAL domain AM474_RS21570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM474_RS21570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM474_RS21575 PF01810 LysE type translocator AM474_RS21585 PF03466 LysR substrate binding domain AM474_RS21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS21595 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AM474_RS21610 PF04023 FeoA domain AM474_RS21615 PF07664 Ferrous iron transport protein B C terminus AM474_RS21615 PF07670 Nucleoside recognition AM474_RS21615 PF17910 FeoB cytosolic helical domain AM474_RS21615 PF02421 Ferrous iron transport protein B AM474_RS21620 PF09012 FeoC like transcriptional regulator AM474_RS21625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS21630 PF07690 Major Facilitator Superfamily AM474_RS21645 PF00582 Universal stress protein family AM474_RS21665 PF00258 Flavodoxin AM474_RS21665 PF01613 Flavin reductase like domain AM474_RS21670 PF11954 Domain of unknown function (DUF3471) AM474_RS21670 PF00144 Beta-lactamase AM474_RS21685 PF07687 Peptidase dimerisation domain AM474_RS21685 PF01546 Peptidase family M20/M25/M40 AM474_RS21690 PF07690 Major Facilitator Superfamily AM474_RS21695 PF01425 Amidase AM474_RS21710 PF13396 Phospholipase_D-nuclease N-terminal AM474_RS21710 PF13091 PLD-like domain AM474_RS21725 PF01965 DJ-1/PfpI family AM474_RS21735 PF01566 Natural resistance-associated macrophage protein AM474_RS21740 PF05683 Fumarase C-terminus AM474_RS21740 PF05681 Fumarate hydratase (Fumerase) AM474_RS21745 PF08448 PAS fold AM474_RS21745 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS21750 PF00175 Oxidoreductase NAD-binding domain AM474_RS21750 PF00970 Oxidoreductase FAD-binding domain AM474_RS21755 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS21760 PF00224 Pyruvate kinase, barrel domain AM474_RS21760 PF02887 Pyruvate kinase, alpha/beta domain AM474_RS21765 PF00582 Universal stress protein family AM474_RS21795 PF07726 ATPase family associated with various cellular activities (AAA) AM474_RS21795 PF17863 AAA lid domain AM474_RS21825 PF08411 Exonuclease C-terminal AM474_RS21825 PF00929 Exonuclease AM474_RS21835 PF00551 Formyl transferase AM474_RS21835 PF01842 ACT domain AM474_RS21855 PF00534 Glycosyl transferases group 1 AM474_RS21855 PF13439 Glycosyltransferase Family 4 AM474_RS21865 PF02743 Cache domain AM474_RS21865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS21865 PF00672 HAMP domain AM474_RS21870 PF02743 Cache domain AM474_RS21870 PF00672 HAMP domain AM474_RS21870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS21875 PF05872 Bacterial protein of unknown function (DUF853) AM474_RS21880 PF02743 Cache domain AM474_RS21880 PF00672 HAMP domain AM474_RS21880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS21895 PF00263 Bacterial type II and III secretion system protein AM474_RS21895 PF04972 BON domain AM474_RS21895 PF13629 Pilus formation protein N terminal region AM474_RS21905 PF00437 Type II/IV secretion system protein AM474_RS21935 PF00072 Response regulator receiver domain AM474_RS21935 PF00196 Bacterial regulatory proteins, luxR family AM474_RS21950 PF08448 PAS fold AM474_RS21950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS21950 PF08447 PAS fold AM474_RS21955 PF01384 Phosphate transporter family AM474_RS21965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS21965 PF00672 HAMP domain AM474_RS21965 PF02743 Cache domain AM474_RS21980 PF00892 EamA-like transporter family AM474_RS21990 PF17946 RecC C-terminal domain AM474_RS21995 PF12705 PD-(D/E)XK nuclease superfamily AM474_RS21995 PF13361 UvrD-like helicase C-terminal domain AM474_RS21995 PF00580 UvrD/REP helicase N-terminal domain AM474_RS22000 PF13538 UvrD-like helicase C-terminal domain AM474_RS22010 PF12320 Type 5 capsule protein repressor C-terminal domain AM474_RS22010 PF00149 Calcineurin-like phosphoesterase AM474_RS22040 PF02811 PHP domain AM474_RS22040 PF14579 Helix-hairpin-helix motif AM474_RS22040 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM474_RS22040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM474_RS22055 PF01126 Heme oxygenase AM474_RS22080 PF07963 Prokaryotic N-terminal methylation motif AM474_RS22080 PF11612 Type II secretion system (T2SS), protein J AM474_RS22085 PF07963 Prokaryotic N-terminal methylation motif AM474_RS22085 PF12019 Type II transport protein GspH AM474_RS22095 PF02501 Type II secretion system (T2SS), protein I AM474_RS22095 PF07963 Prokaryotic N-terminal methylation motif AM474_RS22100 PF08334 Type II secretion system (T2SS), protein G AM474_RS22100 PF07963 Prokaryotic N-terminal methylation motif AM474_RS22105 PF03934 Type II secretion system (T2SS), protein K AM474_RS22120 PF03958 Bacterial type II/III secretion system short domain AM474_RS22120 PF00263 Bacterial type II and III secretion system protein AM474_RS22125 PF00437 Type II/IV secretion system protein AM474_RS22130 PF00482 Type II secretion system (T2SS), protein F AM474_RS22135 PF12849 PBP superfamily domain AM474_RS22150 PF17287 POTRA domain AM474_RS22150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM474_RS22150 PF08479 POTRA domain, ShlB-type AM474_RS22155 PF01618 MotA/TolQ/ExbB proton channel family AM474_RS22160 PF02472 Biopolymer transport protein ExbD/TolR AM474_RS22185 PF00639 PPIC-type PPIASE domain AM474_RS22195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS22195 PF03466 LysR substrate binding domain AM474_RS22210 PF07690 Major Facilitator Superfamily AM474_RS22215 PF01425 Amidase AM474_RS22220 PF00132 Bacterial transferase hexapeptide (six repeats) AM474_RS22225 PF00535 Glycosyl transferase family 2 AM474_RS22235 PF00563 EAL domain AM474_RS22240 PF03466 LysR substrate binding domain AM474_RS22240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS22250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS22260 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM474_RS22280 PF00561 alpha/beta hydrolase fold AM474_RS22295 PF01479 S4 domain AM474_RS22295 PF00849 RNA pseudouridylate synthase AM474_RS22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS22335 PF03466 LysR substrate binding domain AM474_RS22340 PF14864 Alkyl sulfatase C-terminal AM474_RS22340 PF14863 Alkyl sulfatase dimerisation AM474_RS22340 PF00753 Metallo-beta-lactamase superfamily AM474_RS22345 PF13460 NAD(P)H-binding AM474_RS22355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM474_RS22355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM474_RS22365 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS22370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS22370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS22370 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS22375 PF00171 Aldehyde dehydrogenase family AM474_RS22380 PF02311 AraC-like ligand binding domain AM474_RS22380 PF12833 Helix-turn-helix domain AM474_RS22385 PF04294 VanW like protein AM474_RS22390 PF03167 Uracil DNA glycosylase superfamily AM474_RS22395 PF05145 Transition state regulatory protein AbrB AM474_RS22400 PF01970 Tripartite tricarboxylate transporter TctA family AM474_RS22415 PF03573 outer membrane porin, OprD family AM474_RS22420 PF00486 Transcriptional regulatory protein, C terminal AM474_RS22420 PF00072 Response regulator receiver domain AM474_RS22425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS22425 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS22435 PF01571 Aminomethyltransferase folate-binding domain AM474_RS22440 PF03937 Flavinator of succinate dehydrogenase AM474_RS22450 PF00890 FAD binding domain AM474_RS22450 PF02910 Fumarate reductase flavoprotein C-term AM474_RS22455 PF04542 Sigma-70 region 2 AM474_RS22455 PF08281 Sigma-70, region 4 AM474_RS22460 PF03873 Anti sigma-E protein RseA, C-terminal domain AM474_RS22460 PF03872 Anti sigma-E protein RseA, N-terminal domain AM474_RS22465 PF03888 MucB/RseB N-terminal domain AM474_RS22465 PF17188 MucB/RseB C-terminal domain AM474_RS22475 PF13180 PDZ domain AM474_RS22480 PF00009 Elongation factor Tu GTP binding domain AM474_RS22480 PF03144 Elongation factor Tu domain 2 AM474_RS22480 PF06421 GTP-binding protein LepA C-terminus AM474_RS22480 PF00679 Elongation factor G C-terminus AM474_RS22485 PF10502 Signal peptidase, peptidase S26 AM474_RS22495 PF00035 Double-stranded RNA binding motif AM474_RS22495 PF14622 Ribonuclease-III-like AM474_RS22500 PF01926 50S ribosome-binding GTPase AM474_RS22500 PF07650 KH domain AM474_RS22505 PF02565 Recombination protein O C terminal AM474_RS22505 PF11967 Recombination protein O N terminal AM474_RS22510 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM474_RS22515 PF08003 Protein of unknown function (DUF1698) AM474_RS22520 PF13649 Methyltransferase domain AM474_RS22540 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS22540 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM474_RS22540 PF05362 Lon protease (S16) C-terminal proteolytic domain AM474_RS22545 PF12833 Helix-turn-helix domain AM474_RS22550 PF00593 TonB dependent receptor AM474_RS22550 PF07715 TonB-dependent Receptor Plug Domain AM474_RS22555 PF01619 Proline dehydrogenase AM474_RS22555 PF14850 DNA-binding domain of Proline dehydrogenase AM474_RS22555 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM474_RS22555 PF00171 Aldehyde dehydrogenase family AM474_RS22560 PF00474 Sodium:solute symporter family AM474_RS22565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS22565 PF03466 LysR substrate binding domain AM474_RS22570 PF02525 Flavodoxin-like fold AM474_RS22575 PF00893 Small Multidrug Resistance protein AM474_RS22600 PF00324 Amino acid permease AM474_RS22615 PF03972 MmgE/PrpD family AM474_RS22620 PF04303 PrpF protein AM474_RS22625 PF00330 Aconitase family (aconitate hydratase) AM474_RS22625 PF00694 Aconitase C-terminal domain AM474_RS22630 PF00285 Citrate synthase, C-terminal domain AM474_RS22640 PF00392 Bacterial regulatory proteins, gntR family AM474_RS22640 PF07729 FCD domain AM474_RS22645 PF08241 Methyltransferase domain AM474_RS22650 PF12419 SNF2 Helicase protein AM474_RS22650 PF00271 Helicase conserved C-terminal domain AM474_RS22650 PF00176 SNF2 family N-terminal domain AM474_RS22675 PF00248 Aldo/keto reductase family AM474_RS22690 PF01510 N-acetylmuramoyl-L-alanine amidase AM474_RS22700 PF01566 Natural resistance-associated macrophage protein AM474_RS22705 PF13419 Haloacid dehalogenase-like hydrolase AM474_RS22720 PF00266 Aminotransferase class-V AM474_RS22730 PF03466 LysR substrate binding domain AM474_RS22730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS22735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS22735 PF03466 LysR substrate binding domain AM474_RS22800 PF08361 MAATS-type transcriptional repressor, C-terminal region AM474_RS22800 PF00440 Bacterial regulatory proteins, tetR family AM474_RS22805 PF00561 alpha/beta hydrolase fold AM474_RS22815 PF12833 Helix-turn-helix domain AM474_RS22815 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS22820 PF00753 Metallo-beta-lactamase superfamily AM474_RS22825 PF00691 OmpA family AM474_RS22825 PF13488 Glycine zipper AM474_RS22830 PF01553 Acyltransferase AM474_RS22835 PF07085 DRTGG domain AM474_RS22835 PF01515 Phosphate acetyl/butaryl transferase AM474_RS22840 PF00871 Acetokinase family AM474_RS22850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM474_RS22855 PF00255 Glutathione peroxidase AM474_RS22860 PF16925 Tetracyclin repressor-like, C-terminal domain AM474_RS22860 PF00440 Bacterial regulatory proteins, tetR family AM474_RS22865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS22865 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS22870 PF02645 Uncharacterised protein, DegV family COG1307 AM474_RS22875 PF13439 Glycosyltransferase Family 4 AM474_RS22875 PF00534 Glycosyl transferases group 1 AM474_RS22885 PF04185 Phosphoesterase family AM474_RS22885 PF05506 Domain of unknown function (DUF756) AM474_RS22890 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AM474_RS22890 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AM474_RS22900 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS22900 PF03707 Bacterial signalling protein N terminal repeat AM474_RS22900 PF00563 EAL domain AM474_RS22905 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM474_RS22905 PF00578 AhpC/TSA family AM474_RS22910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS22920 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS22925 PF18416 N-acetylglucosamine binding protein domain 2 AM474_RS22925 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AM474_RS22935 PF10415 Fumarase C C-terminus AM474_RS22935 PF00206 Lyase AM474_RS22950 PF01722 BolA-like protein AM474_RS22955 PF00581 Rhodanese-like domain AM474_RS22955 PF17773 UPF0176 acylphosphatase like domain AM474_RS22965 PF00664 ABC transporter transmembrane region AM474_RS22965 PF00005 ABC transporter AM474_RS22970 PF08448 PAS fold AM474_RS22970 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS22970 PF00563 EAL domain AM474_RS22980 PF16197 Ketoacyl-synthetase C-terminal extension AM474_RS22980 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS22980 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS22980 PF08659 KR domain AM474_RS22980 PF00550 Phosphopantetheine attachment site AM474_RS22980 PF00698 Acyl transferase domain AM474_RS22980 PF14765 Polyketide synthase dehydratase AM474_RS22980 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS22980 PF00107 Zinc-binding dehydrogenase AM474_RS22990 PF02311 AraC-like ligand binding domain AM474_RS22990 PF12833 Helix-turn-helix domain AM474_RS22995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS23000 PF00324 Amino acid permease AM474_RS23005 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AM474_RS23010 PF00472 RF-1 domain AM474_RS23015 PF00768 D-alanyl-D-alanine carboxypeptidase AM474_RS23020 PF00155 Aminotransferase class I and II AM474_RS23025 PF01329 Pterin 4 alpha carbinolamine dehydratase AM474_RS23030 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AM474_RS23035 PF18024 Helix-turn-helix domain AM474_RS23035 PF00158 Sigma-54 interaction domain AM474_RS23055 PF04632 Fusaric acid resistance protein family AM474_RS23060 PF03466 LysR substrate binding domain AM474_RS23060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS23065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS23065 PF03466 LysR substrate binding domain AM474_RS23075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS23075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS23075 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS23080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS23085 PF03972 MmgE/PrpD family AM474_RS23090 PF02515 CoA-transferase family III AM474_RS23095 PF03328 HpcH/HpaI aldolase/citrate lyase family AM474_RS23100 PF03480 Bacterial extracellular solute-binding protein, family 7 AM474_RS23105 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM474_RS23110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM474_RS23115 PF16177 Acetyl-coenzyme A synthetase N-terminus AM474_RS23115 PF00501 AMP-binding enzyme AM474_RS23115 PF13193 AMP-binding enzyme C-terminal domain AM474_RS23120 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS23125 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS23130 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS23140 PF00005 ABC transporter AM474_RS23145 PF12833 Helix-turn-helix domain AM474_RS23155 PF00202 Aminotransferase class-III AM474_RS23160 PF04958 Arginine N-succinyltransferase beta subunit AM474_RS23165 PF04958 Arginine N-succinyltransferase beta subunit AM474_RS23170 PF00171 Aldehyde dehydrogenase family AM474_RS23175 PF04996 Succinylarginine dihydrolase AM474_RS23185 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM474_RS23190 PF01212 Beta-eliminating lyase AM474_RS23195 PF02272 DHHA1 domain AM474_RS23195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM474_RS23195 PF01411 tRNA synthetases class II (A) AM474_RS23200 PF00696 Amino acid kinase family AM474_RS23200 PF01842 ACT domain AM474_RS23200 PF13840 ACT domain AM474_RS23205 PF02599 Global regulator protein family AM474_RS23225 PF01381 Helix-turn-helix AM474_RS23225 PF00717 Peptidase S24-like AM474_RS23260 PF03448 MgtE intracellular N domain AM474_RS23260 PF01769 Divalent cation transporter AM474_RS23260 PF00571 CBS domain AM474_RS23270 PF07308 Protein of unknown function (DUF1456) AM474_RS23275 PF04055 Radical SAM superfamily AM474_RS23275 PF18693 TRAM domain AM474_RS23275 PF00919 Uncharacterized protein family UPF0004 AM474_RS23285 PF02705 K+ potassium transporter AM474_RS23290 PF01292 Prokaryotic cytochrome b561 AM474_RS23300 PF09924 Uncharacterised conserved protein (DUF2156) AM474_RS23300 PF03706 Lysylphosphatidylglycerol synthase TM region AM474_RS23310 PF00872 Transposase, Mutator family AM474_RS23325 PF11798 IMS family HHH motif AM474_RS23325 PF00817 impB/mucB/samB family AM474_RS23325 PF11799 impB/mucB/samB family C-terminal domain AM474_RS23330 PF11893 Domain of unknown function (DUF3413) AM474_RS23330 PF00884 Sulfatase AM474_RS23345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM474_RS23345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM474_RS23350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS23350 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS23350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM474_RS23350 PF00072 Response regulator receiver domain AM474_RS23350 PF00672 HAMP domain AM474_RS23350 PF01627 Hpt domain AM474_RS23355 PF00486 Transcriptional regulatory protein, C terminal AM474_RS23355 PF00072 Response regulator receiver domain AM474_RS23360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS23360 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS23360 PF16750 Sensor domain of 2-component histidine kinase AM474_RS23360 PF00672 HAMP domain AM474_RS23365 PF00593 TonB dependent receptor AM474_RS23365 PF07715 TonB-dependent Receptor Plug Domain AM474_RS23370 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS23375 PF05958 tRNA (Uracil-5-)-methyltransferase AM474_RS23380 PF02824 TGS domain AM474_RS23380 PF13291 ACT domain AM474_RS23380 PF04607 Region found in RelA / SpoT proteins AM474_RS23385 PF03819 MazG nucleotide pyrophosphohydrolase domain AM474_RS23395 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM474_RS23435 PF00551 Formyl transferase AM474_RS23440 PF02769 AIR synthase related protein, C-terminal domain AM474_RS23440 PF00586 AIR synthase related protein, N-terminal domain AM474_RS23455 PF00308 Bacterial dnaA protein AM474_RS23465 PF03358 NADPH-dependent FMN reductase AM474_RS23470 PF03960 ArsC family AM474_RS23475 PF03631 Virulence factor BrkB AM474_RS23490 PF00085 Thioredoxin AM474_RS23495 PF00708 Acylphosphatase AM474_RS23505 PF03129 Anticodon binding domain AM474_RS23505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM474_RS23505 PF04073 Aminoacyl-tRNA editing domain AM474_RS23520 PF00872 Transposase, Mutator family AM474_RS23535 PF04102 SlyX AM474_RS23540 PF00313 'Cold-shock' DNA-binding domain AM474_RS23545 PF00210 Ferritin-like domain AM474_RS23550 PF01336 OB-fold nucleic acid binding domain AM474_RS23550 PF00152 tRNA synthetases class II (D, K and N) AM474_RS23550 PF02938 GAD domain AM474_RS23555 PF01709 Transcriptional regulator AM474_RS23560 PF02075 Crossover junction endodeoxyribonuclease RuvC AM474_RS23565 PF07499 RuvA, C-terminal domain AM474_RS23565 PF01330 RuvA N terminal domain AM474_RS23570 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM474_RS23570 PF17864 RuvB AAA lid domain AM474_RS23570 PF05491 RuvB C-terminal winged helix domain AM474_RS23575 PF03061 Thioesterase superfamily AM474_RS23580 PF01618 MotA/TolQ/ExbB proton channel family AM474_RS23585 PF02472 Biopolymer transport protein ExbD/TolR AM474_RS23595 PF04052 TolB amino-terminal domain AM474_RS23595 PF07676 WD40-like Beta Propeller Repeat AM474_RS23600 PF00691 OmpA family AM474_RS23605 PF16331 TolA binding protein trimerisation AM474_RS23605 PF13525 Outer membrane lipoprotein AM474_RS23610 PF04055 Radical SAM superfamily AM474_RS23615 PF06508 Queuosine biosynthesis protein QueC AM474_RS23625 PF00589 Phage integrase family AM474_RS23635 PF01494 FAD binding domain AM474_RS23640 PF07883 Cupin domain AM474_RS23645 PF00753 Metallo-beta-lactamase superfamily AM474_RS23650 PF05199 GMC oxidoreductase AM474_RS23650 PF00732 GMC oxidoreductase AM474_RS23655 PF03466 LysR substrate binding domain AM474_RS23655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS23660 PF00596 Class II Aldolase and Adducin N-terminal domain AM474_RS23665 PF00171 Aldehyde dehydrogenase family AM474_RS23685 PF00999 Sodium/hydrogen exchanger family AM474_RS23685 PF02254 TrkA-N domain AM474_RS23695 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AM474_RS23700 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AM474_RS23790 PF00293 NUDIX domain AM474_RS23800 PF00419 Fimbrial protein AM474_RS23805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM474_RS23805 PF02753 Pili assembly chaperone PapD, C-terminal domain AM474_RS23810 PF13953 PapC C-terminal domain AM474_RS23810 PF13954 PapC N-terminal domain AM474_RS23810 PF00577 Outer membrane usher protein AM474_RS23815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM474_RS23815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM474_RS23820 PF00501 AMP-binding enzyme AM474_RS23820 PF13193 AMP-binding enzyme C-terminal domain AM474_RS23830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM474_RS23830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM474_RS23835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM474_RS23835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM474_RS23840 PF00753 Metallo-beta-lactamase superfamily AM474_RS23845 PF00425 chorismate binding enzyme AM474_RS23845 PF04715 Anthranilate synthase component I, N terminal region AM474_RS23850 PF00117 Glutamine amidotransferase class-I AM474_RS23855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS23855 PF03466 LysR substrate binding domain AM474_RS23860 PF02445 Quinolinate synthetase A protein AM474_RS23865 PF01435 Peptidase family M48 AM474_RS23870 PF01206 Sulfurtransferase TusA AM474_RS23875 PF01594 AI-2E family transporter AM474_RS23880 PF00578 AhpC/TSA family AM474_RS23890 PF00701 Dihydrodipicolinate synthetase family AM474_RS23895 PF06804 NlpB/DapX lipoprotein AM474_RS23900 PF10996 Beta-Casp domain AM474_RS23900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AM474_RS23900 PF00753 Metallo-beta-lactamase superfamily AM474_RS23905 PF01259 SAICAR synthetase AM474_RS23915 PF00535 Glycosyl transferase family 2 AM474_RS23930 PF02803 Thiolase, C-terminal domain AM474_RS23930 PF00108 Thiolase, N-terminal domain AM474_RS23935 PF13380 CoA binding domain AM474_RS23935 PF13607 Succinyl-CoA ligase like flavodoxin domain AM474_RS23940 PF01575 MaoC like domain AM474_RS23945 PF07690 Major Facilitator Superfamily AM474_RS23955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS23955 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS23955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS23960 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS23965 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS23965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS23965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS23970 PF00106 short chain dehydrogenase AM474_RS23975 PF03060 Nitronate monooxygenase AM474_RS23980 PF03573 outer membrane porin, OprD family AM474_RS23995 PF00171 Aldehyde dehydrogenase family AM474_RS24000 PF01266 FAD dependent oxidoreductase AM474_RS24015 PF02646 RmuC family AM474_RS24020 PF01804 Penicillin amidase AM474_RS24025 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS24025 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS24030 PF02810 SEC-C motif AM474_RS24030 PF07516 SecA Wing and Scaffold domain AM474_RS24030 PF07517 SecA DEAD-like domain AM474_RS24030 PF01043 SecA preprotein cross-linking domain AM474_RS24045 PF03458 UPF0126 domain AM474_RS24055 PF02810 SEC-C motif AM474_RS24065 PF00691 OmpA family AM474_RS24065 PF05736 OprF membrane domain AM474_RS24085 PF06733 DEAD_2 AM474_RS24085 PF13307 Helicase C-terminal domain AM474_RS24090 PF02449 Beta-galactosidase AM474_RS24090 PF17992 Agarase CBM like domain AM474_RS24095 PF00144 Beta-lactamase AM474_RS24100 PF00223 Photosystem I psaA/psaB protein AM474_RS24100 PF00691 OmpA family AM474_RS24105 PF01243 Pyridoxamine 5'-phosphate oxidase AM474_RS24105 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM474_RS24110 PF05651 Putative sugar diacid recognition AM474_RS24110 PF17853 GGDEF-like domain AM474_RS24110 PF13556 PucR C-terminal helix-turn-helix domain AM474_RS24115 PF02447 GntP family permease AM474_RS24120 PF02595 Glycerate kinase family AM474_RS24130 PF05433 Glycine zipper 2TM domain AM474_RS24140 PF00361 Proton-conducting membrane transporter AM474_RS24140 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AM474_RS24140 PF13244 Domain of unknown function (DUF4040) AM474_RS24140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM474_RS24145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM474_RS24150 PF00361 Proton-conducting membrane transporter AM474_RS24155 PF01899 Na+/H+ ion antiporter subunit AM474_RS24160 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AM474_RS24175 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS24195 PF04343 Protein of unknown function, DUF488 AM474_RS24205 PF03466 LysR substrate binding domain AM474_RS24205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS24210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS24210 PF00183 Hsp90 protein AM474_RS24220 PF00005 ABC transporter AM474_RS24225 PF00005 ABC transporter AM474_RS24225 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM474_RS24230 PF02653 Branched-chain amino acid transport system / permease component AM474_RS24230 PF11862 Domain of unknown function (DUF3382) AM474_RS24235 PF02653 Branched-chain amino acid transport system / permease component AM474_RS24240 PF13458 Periplasmic binding protein AM474_RS24260 PF00460 Flagella basal body rod protein AM474_RS24265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM474_RS24265 PF00460 Flagella basal body rod protein AM474_RS24270 PF13861 FlgD Tudor-like domain AM474_RS24270 PF13860 FlgD Ig-like domain AM474_RS24270 PF03963 Flagellar hook capping protein - N-terminal region AM474_RS24275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM474_RS24275 PF07559 Flagellar basal body protein FlaE AM474_RS24275 PF00460 Flagella basal body rod protein AM474_RS24280 PF00460 Flagella basal body rod protein AM474_RS24280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM474_RS24285 PF00460 Flagella basal body rod protein AM474_RS24285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM474_RS24290 PF02107 Flagellar L-ring protein AM474_RS24295 PF02119 Flagellar P-ring protein AM474_RS24300 PF10135 Rod binding protein AM474_RS24300 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM474_RS24305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM474_RS24305 PF00460 Flagella basal body rod protein AM474_RS24310 PF00669 Bacterial flagellin N-terminal helical region AM474_RS24325 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM474_RS24325 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM474_RS24355 PF00535 Glycosyl transferase family 2 AM474_RS24360 PF00700 Bacterial flagellin C-terminal helical region AM474_RS24360 PF00669 Bacterial flagellin N-terminal helical region AM474_RS24370 PF07195 Flagellar hook-associated protein 2 C-terminus AM474_RS24370 PF02465 Flagellar hook-associated protein 2 N-terminus AM474_RS24370 PF07196 Flagellin hook IN motif AM474_RS24375 PF02561 Flagellar protein FliS AM474_RS24380 PF02561 Flagellar protein FliS AM474_RS24390 PF02954 Bacterial regulatory protein, Fis family AM474_RS24390 PF00158 Sigma-54 interaction domain AM474_RS24390 PF06490 Flagellar regulatory protein FleQ AM474_RS24395 PF13188 PAS domain AM474_RS24395 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS24395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS24400 PF00158 Sigma-54 interaction domain AM474_RS24400 PF00072 Response regulator receiver domain AM474_RS24400 PF02954 Bacterial regulatory protein, Fis family AM474_RS24405 PF02049 Flagellar hook-basal body complex protein FliE AM474_RS24410 PF08345 Flagellar M-ring protein C-terminal AM474_RS24410 PF01514 Secretory protein of YscJ/FliF family AM474_RS24415 PF01706 FliG C-terminal domain AM474_RS24415 PF14841 FliG middle domain AM474_RS24415 PF14842 FliG N-terminal domain AM474_RS24425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM474_RS24425 PF18269 T3SS EscN ATPase C-terminal domain AM474_RS24430 PF02050 Flagellar FliJ protein AM474_RS24440 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS24440 PF17151 Periplasmic sensor domain AM474_RS24445 PF07690 Major Facilitator Superfamily AM474_RS24450 PF12833 Helix-turn-helix domain AM474_RS24450 PF02311 AraC-like ligand binding domain AM474_RS24465 PF07995 Glucose / Sorbosone dehydrogenase AM474_RS24470 PF09905 DNA-binding protein VF530 AM474_RS24485 PF00664 ABC transporter transmembrane region AM474_RS24485 PF00005 ABC transporter AM474_RS24500 PF13509 S1 domain AM474_RS24500 PF17783 CvfB-like winged helix domain AM474_RS24515 PF00691 OmpA family AM474_RS24520 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS24520 PF17152 Periplasmic sensor domain AM474_RS24525 PF13689 YfiR/HmsC-like AM474_RS24530 PF01327 Polypeptide deformylase AM474_RS24545 PF01966 HD domain AM474_RS24545 PF13286 Phosphohydrolase-associated domain AM474_RS24550 PF02146 Sir2 family AM474_RS24560 PF00248 Aldo/keto reductase family AM474_RS24565 PF03466 LysR substrate binding domain AM474_RS24565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS24570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS24580 PF07690 Major Facilitator Superfamily AM474_RS24600 PF01965 DJ-1/PfpI family AM474_RS24605 PF03472 Autoinducer binding domain AM474_RS24605 PF00196 Bacterial regulatory proteins, luxR family AM474_RS24610 PF08659 KR domain AM474_RS24610 PF14765 Polyketide synthase dehydratase AM474_RS24610 PF00550 Phosphopantetheine attachment site AM474_RS24610 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS24610 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS24610 PF16197 Ketoacyl-synthetase C-terminal extension AM474_RS24610 PF00698 Acyl transferase domain AM474_RS24610 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS24625 PF05899 Protein of unknown function (DUF861) AM474_RS24625 PF07883 Cupin domain AM474_RS24630 PF03466 LysR substrate binding domain AM474_RS24630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS24635 PF00392 Bacterial regulatory proteins, gntR family AM474_RS24635 PF07702 UTRA domain AM474_RS24650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS24650 PF03466 LysR substrate binding domain AM474_RS24655 PF00465 Iron-containing alcohol dehydrogenase AM474_RS24660 PF13520 Amino acid permease AM474_RS24665 PF09101 Exotoxin A binding AM474_RS24665 PF09009 Exotoxin A catalytic AM474_RS24665 PF09102 Exotoxin A, targeting AM474_RS24670 PF00872 Transposase, Mutator family AM474_RS24690 PF00872 Transposase, Mutator family AM474_RS24695 PF06958 S-type Pyocin AM474_RS24695 PF06958 S-type Pyocin AM474_RS24715 PF00268 Ribonucleotide reductase, small chain AM474_RS24720 PF03477 ATP cone domain AM474_RS24720 PF02867 Ribonucleotide reductase, barrel domain AM474_RS24720 PF00317 Ribonucleotide reductase, all-alpha domain AM474_RS24725 PF00486 Transcriptional regulatory protein, C terminal AM474_RS24725 PF00072 Response regulator receiver domain AM474_RS24730 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS24730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS24730 PF00672 HAMP domain AM474_RS24735 PF00313 'Cold-shock' DNA-binding domain AM474_RS24745 PF13847 Methyltransferase domain AM474_RS24750 PF07687 Peptidase dimerisation domain AM474_RS24750 PF01546 Peptidase family M20/M25/M40 AM474_RS24760 PF00899 ThiF family AM474_RS24765 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AM474_RS24765 PF01648 4'-phosphopantetheinyl transferase superfamily AM474_RS24770 PF01738 Dienelactone hydrolase family AM474_RS24785 PF00305 Lipoxygenase AM474_RS24790 PF03741 Integral membrane protein TerC family AM474_RS24795 PF13406 Transglycosylase SLT domain AM474_RS24800 PF03264 NapC/NirT cytochrome c family, N-terminal region AM474_RS24805 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AM474_RS24810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM474_RS24810 PF01568 Molydopterin dinucleotide binding domain AM474_RS24810 PF00384 Molybdopterin oxidoreductase AM474_RS24815 PF03927 NapD protein AM474_RS24820 PF12800 4Fe-4S binding domain AM474_RS24820 PF00037 4Fe-4S binding domain AM474_RS24820 PF13187 4Fe-4S dicluster domain AM474_RS24825 PF06796 Periplasmic nitrate reductase protein NapE AM474_RS24835 PF00072 Response regulator receiver domain AM474_RS24835 PF00486 Transcriptional regulatory protein, C terminal AM474_RS24840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS24845 PF00563 EAL domain AM474_RS24845 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS24845 PF08447 PAS fold AM474_RS24845 PF08448 PAS fold AM474_RS24845 PF05231 MASE1 AM474_RS24845 PF13426 PAS domain AM474_RS24860 PF00375 Sodium:dicarboxylate symporter family AM474_RS24865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS24865 PF03466 LysR substrate binding domain AM474_RS24870 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS24870 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS24875 PF00296 Luciferase-like monooxygenase AM474_RS24880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS24880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS24880 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS24885 PF02515 CoA-transferase family III AM474_RS24890 PF17283 SprT-like zinc ribbon domain AM474_RS24890 PF10263 SprT-like family AM474_RS24895 PF04893 Yip1 domain AM474_RS24940 PF01171 PP-loop family AM474_RS24945 PF03352 Methyladenine glycosylase AM474_RS24950 PF13520 Amino acid permease AM474_RS24960 PF00158 Sigma-54 interaction domain AM474_RS24960 PF13426 PAS domain AM474_RS24960 PF02954 Bacterial regulatory protein, Fis family AM474_RS24965 PF02146 Sir2 family AM474_RS24970 PF00877 NlpC/P60 family AM474_RS24975 PF00877 NlpC/P60 family AM474_RS24980 PF01596 O-methyltransferase AM474_RS24985 PF03466 LysR substrate binding domain AM474_RS24985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS24990 PF00857 Isochorismatase family AM474_RS25000 PF03358 NADPH-dependent FMN reductase AM474_RS25005 PF02678 Pirin AM474_RS25005 PF05726 Pirin C-terminal cupin domain AM474_RS25015 PF00999 Sodium/hydrogen exchanger family AM474_RS25015 PF02254 TrkA-N domain AM474_RS25020 PF00743 Flavin-binding monooxygenase-like AM474_RS25030 PF02678 Pirin AM474_RS25030 PF17954 Quercetinase C-terminal cupin domain AM474_RS25040 PF07690 Major Facilitator Superfamily AM474_RS25050 PF13537 Glutamine amidotransferase domain AM474_RS25050 PF00733 Asparagine synthase AM474_RS25055 PF13193 AMP-binding enzyme C-terminal domain AM474_RS25055 PF00501 AMP-binding enzyme AM474_RS25065 PF00682 HMGL-like AM474_RS25085 PF00550 Phosphopantetheine attachment site AM474_RS25085 PF00668 Condensation domain AM474_RS25085 PF00501 AMP-binding enzyme AM474_RS25085 PF13193 AMP-binding enzyme C-terminal domain AM474_RS25090 PF03562 MltA specific insert domain AM474_RS25090 PF06725 3D domain AM474_RS25100 PF03466 LysR substrate binding domain AM474_RS25100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS25105 PF04371 Porphyromonas-type peptidyl-arginine deiminase AM474_RS25110 PF00795 Carbon-nitrogen hydrolase AM474_RS25115 PF13416 Bacterial extracellular solute-binding protein AM474_RS25120 PF04371 Porphyromonas-type peptidyl-arginine deiminase AM474_RS25125 PF02525 Flavodoxin-like fold AM474_RS25145 PF12833 Helix-turn-helix domain AM474_RS25145 PF02311 AraC-like ligand binding domain AM474_RS25155 PF13533 Biotin-lipoyl like AM474_RS25160 PF04632 Fusaric acid resistance protein family AM474_RS25175 PF12833 Helix-turn-helix domain AM474_RS25180 PF07690 Major Facilitator Superfamily AM474_RS25185 PF13533 Biotin-lipoyl like AM474_RS25190 PF02321 Outer membrane efflux protein AM474_RS25200 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS25215 PF00072 Response regulator receiver domain AM474_RS25215 PF13426 PAS domain AM474_RS25215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS25225 PF18019 HD domain AM474_RS25225 PF18395 Cas3 C-terminal domain AM474_RS25230 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) AM474_RS25235 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) AM474_RS25240 PF09344 CT1975-like protein AM474_RS25250 PF08798 CRISPR associated protein AM474_RS25255 PF01867 CRISPR associated protein Cas1 AM474_RS25260 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) AM474_RS25275 PF00664 ABC transporter transmembrane region AM474_RS25275 PF00005 ABC transporter AM474_RS25280 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS25285 PF02321 Outer membrane efflux protein AM474_RS25300 PF08548 Peptidase M10 serralysin C terminal AM474_RS25300 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM474_RS25305 PF02974 Protease inhibitor Inh AM474_RS25310 PF12729 Four helix bundle sensory module for signal transduction AM474_RS25310 PF00672 HAMP domain AM474_RS25310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS25315 PF02615 Malate/L-lactate dehydrogenase AM474_RS25320 PF00171 Aldehyde dehydrogenase family AM474_RS25325 PF00701 Dihydrodipicolinate synthetase family AM474_RS25330 PF05544 Proline racemase AM474_RS25335 PF00005 ABC transporter AM474_RS25345 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS25355 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS25365 PF07690 Major Facilitator Superfamily AM474_RS25380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS25380 PF03466 LysR substrate binding domain AM474_RS25390 PF04324 BFD-like [2Fe-2S] binding domain AM474_RS25390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS25400 PF01266 FAD dependent oxidoreductase AM474_RS25405 PF05544 Proline racemase AM474_RS25410 PF07729 FCD domain AM474_RS25410 PF00392 Bacterial regulatory proteins, gntR family AM474_RS25420 PF00593 TonB dependent receptor AM474_RS25420 PF07715 TonB-dependent Receptor Plug Domain AM474_RS25425 PF12557 Cob(I)alamin adenosyltransferase N terminal AM474_RS25425 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM474_RS25430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM474_RS25430 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM474_RS25435 PF00881 Nitroreductase family AM474_RS25440 PF17113 Regulatory signalling modulator protein AmpE AM474_RS25440 PF03186 CobD/Cbib protein AM474_RS25445 PF00155 Aminotransferase class I and II AM474_RS25450 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM474_RS25450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM474_RS25455 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM474_RS25460 PF02277 Phosphoribosyltransferase AM474_RS25465 PF00300 Histidine phosphatase superfamily (branch 1) AM474_RS25470 PF02654 Cobalamin-5-phosphate synthase AM474_RS25475 PF07690 Major Facilitator Superfamily AM474_RS25485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS25485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS25485 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS25485 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM474_RS25500 PF00255 Glutathione peroxidase AM474_RS25505 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM474_RS25515 PF00440 Bacterial regulatory proteins, tetR family AM474_RS25525 PF00581 Rhodanese-like domain AM474_RS25535 PF01612 3'-5' exonuclease AM474_RS25535 PF00570 HRDC domain AM474_RS25540 PF05166 YcgL domain AM474_RS25545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM474_RS25550 PF01545 Cation efflux family AM474_RS25555 PF02583 Metal-sensitive transcriptional repressor AM474_RS25560 PF03692 Putative zinc- or iron-chelating domain AM474_RS25565 PF04542 Sigma-70 region 2 AM474_RS25565 PF08281 Sigma-70, region 4 AM474_RS25570 PF16220 Domain of unknown function (DUF4880) AM474_RS25570 PF04773 FecR protein AM474_RS25575 PF00593 TonB dependent receptor AM474_RS25575 PF07715 TonB-dependent Receptor Plug Domain AM474_RS25580 PF10502 Signal peptidase, peptidase S26 AM474_RS25585 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM474_RS25585 PF00326 Prolyl oligopeptidase family AM474_RS25600 PF13230 Glutamine amidotransferases class-II AM474_RS25610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS25610 PF03466 LysR substrate binding domain AM474_RS25615 PF00266 Aminotransferase class-V AM474_RS25625 PF03466 LysR substrate binding domain AM474_RS25625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS25630 PF07690 Major Facilitator Superfamily AM474_RS25640 PF00440 Bacterial regulatory proteins, tetR family AM474_RS25640 PF08361 MAATS-type transcriptional repressor, C-terminal region AM474_RS25645 PF07690 Major Facilitator Superfamily AM474_RS25655 PF06481 COX Aromatic Rich Motif AM474_RS25655 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM474_RS25660 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM474_RS25665 PF00510 Cytochrome c oxidase subunit III AM474_RS25670 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM474_RS25675 PF01040 UbiA prenyltransferase family AM474_RS25680 PF07715 TonB-dependent Receptor Plug Domain AM474_RS25680 PF00593 TonB dependent receptor AM474_RS25695 PF13474 SnoaL-like domain AM474_RS25700 PF00585 C-terminal regulatory domain of Threonine dehydratase AM474_RS25700 PF00291 Pyridoxal-phosphate dependent enzyme AM474_RS25705 PF01223 DNA/RNA non-specific endonuclease AM474_RS25710 PF03466 LysR substrate binding domain AM474_RS25710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS25720 PF00106 short chain dehydrogenase AM474_RS25725 PF00571 CBS domain AM474_RS25725 PF03471 Transporter associated domain AM474_RS25725 PF03741 Integral membrane protein TerC family AM474_RS25745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM474_RS25750 PF00072 Response regulator receiver domain AM474_RS25750 PF02954 Bacterial regulatory protein, Fis family AM474_RS25750 PF00158 Sigma-54 interaction domain AM474_RS25755 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS25755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS25755 PF02743 Cache domain AM474_RS25760 PF00710 Asparaginase, N-terminal AM474_RS25760 PF17763 Glutaminase/Asparaginase C-terminal domain AM474_RS25770 PF00005 ABC transporter AM474_RS25775 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS25780 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS25785 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM474_RS25795 PF00106 short chain dehydrogenase AM474_RS25800 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM474_RS25800 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM474_RS25805 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM474_RS25805 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM474_RS25805 PF01276 Orn/Lys/Arg decarboxylase, major domain AM474_RS25810 PF00072 Response regulator receiver domain AM474_RS25810 PF00196 Bacterial regulatory proteins, luxR family AM474_RS25820 PF03795 YCII-related domain AM474_RS25830 PF08281 Sigma-70, region 4 AM474_RS25830 PF04542 Sigma-70 region 2 AM474_RS25835 PF07690 Major Facilitator Superfamily AM474_RS25845 PF03795 YCII-related domain AM474_RS25860 PF04073 Aminoacyl-tRNA editing domain AM474_RS25875 PF00892 EamA-like transporter family AM474_RS25880 PF01554 MatE AM474_RS25900 PF00593 TonB dependent receptor AM474_RS25900 PF07715 TonB-dependent Receptor Plug Domain AM474_RS25905 PF02567 Phenazine biosynthesis-like protein AM474_RS25915 PF13192 Thioredoxin domain AM474_RS25915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS25920 PF00440 Bacterial regulatory proteins, tetR family AM474_RS25920 PF16859 Tetracyclin repressor-like, C-terminal domain AM474_RS25935 PF00106 short chain dehydrogenase AM474_RS25940 PF00873 AcrB/AcrD/AcrF family AM474_RS25950 PF00440 Bacterial regulatory proteins, tetR family AM474_RS25975 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS25975 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS25980 PF01638 HxlR-like helix-turn-helix AM474_RS25985 PF11890 Domain of unknown function (DUF3410) AM474_RS25985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM474_RS25985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM474_RS25990 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM474_RS25995 PF00583 Acetyltransferase (GNAT) family AM474_RS26015 PF00106 short chain dehydrogenase AM474_RS26020 PF12833 Helix-turn-helix domain AM474_RS26020 PF06719 AraC-type transcriptional regulator N-terminus AM474_RS26035 PF00072 Response regulator receiver domain AM474_RS26035 PF01627 Hpt domain AM474_RS26035 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS26035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS26040 PF00196 Bacterial regulatory proteins, luxR family AM474_RS26040 PF00072 Response regulator receiver domain AM474_RS26050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS26050 PF03466 LysR substrate binding domain AM474_RS26055 PF00289 Biotin carboxylase, N-terminal domain AM474_RS26055 PF02785 Biotin carboxylase C-terminal domain AM474_RS26055 PF00364 Biotin-requiring enzyme AM474_RS26055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM474_RS26055 PF00682 HMGL-like AM474_RS26055 PF02436 Conserved carboxylase domain AM474_RS26070 PF00440 Bacterial regulatory proteins, tetR family AM474_RS26080 PF12462 DNA helicase IV / RNA helicase N terminal AM474_RS26080 PF00580 UvrD/REP helicase N-terminal domain AM474_RS26080 PF13361 UvrD-like helicase C-terminal domain AM474_RS26090 PF10672 S-adenosylmethionine-dependent methyltransferase AM474_RS26090 PF02926 THUMP domain AM474_RS26090 PF01170 Putative RNA methylase family UPF0020 AM474_RS26095 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM474_RS26095 PF12795 Mechanosensitive ion channel porin domain AM474_RS26095 PF00924 Mechanosensitive ion channel AM474_RS26105 PF00850 Histone deacetylase domain AM474_RS26110 PF13416 Bacterial extracellular solute-binding protein AM474_RS26115 PF00892 EamA-like transporter family AM474_RS26125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS26125 PF03466 LysR substrate binding domain AM474_RS26135 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM474_RS26135 PF00753 Metallo-beta-lactamase superfamily AM474_RS26140 PF02913 FAD linked oxidases, C-terminal domain AM474_RS26140 PF01565 FAD binding domain AM474_RS26145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS26145 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS26145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS26150 PF00474 Sodium:solute symporter family AM474_RS26165 PF00491 Arginase family AM474_RS26170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS26170 PF03466 LysR substrate binding domain AM474_RS26175 PF13426 PAS domain AM474_RS26175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS26175 PF08447 PAS fold AM474_RS26190 PF00005 ABC transporter AM474_RS26190 PF12848 ABC transporter AM474_RS26200 PF13673 Acetyltransferase (GNAT) domain AM474_RS26205 PF00690 Cation transporter/ATPase, N-terminus AM474_RS26205 PF00689 Cation transporting ATPase, C-terminus AM474_RS26230 PF02796 Helix-turn-helix domain of resolvase AM474_RS26230 PF00239 Resolvase, N terminal domain AM474_RS26235 PF05052 MerE protein AM474_RS26240 PF13411 MerR HTH family regulatory protein AM474_RS26245 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS26245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM474_RS26245 PF00403 Heavy-metal-associated domain AM474_RS26255 PF00403 Heavy-metal-associated domain AM474_RS26260 PF02411 MerT mercuric transport protein AM474_RS26265 PF00376 MerR family regulatory protein AM474_RS26265 PF09278 MerR, DNA binding AM474_RS26270 PF03472 Autoinducer binding domain AM474_RS26270 PF00196 Bacterial regulatory proteins, luxR family AM474_RS26280 PF00765 Autoinducer synthase AM474_RS26285 PF13188 PAS domain AM474_RS26285 PF03707 Bacterial signalling protein N terminal repeat AM474_RS26285 PF00563 EAL domain AM474_RS26285 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS26295 PF13533 Biotin-lipoyl like AM474_RS26300 PF00873 AcrB/AcrD/AcrF family AM474_RS26305 PF00486 Transcriptional regulatory protein, C terminal AM474_RS26305 PF00072 Response regulator receiver domain AM474_RS26310 PF00672 HAMP domain AM474_RS26310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS26310 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS26315 PF04304 Protein of unknown function (DUF454) AM474_RS26335 PF02154 Flagellar motor switch protein FliM AM474_RS26335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM474_RS26340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM474_RS26345 PF04347 Flagellar biosynthesis protein, FliO AM474_RS26350 PF00813 FliP family AM474_RS26355 PF01313 Bacterial export proteins, family 3 AM474_RS26360 PF01311 Bacterial export proteins, family 1 AM474_RS26365 PF01312 FlhB HrpN YscU SpaS Family AM474_RS26375 PF04536 TPM domain AM474_RS26380 PF00771 FHIPEP family AM474_RS26385 PF00448 SRP54-type protein, GTPase domain AM474_RS26390 PF10609 NUBPL iron-transfer P-loop NTPase AM474_RS26395 PF04542 Sigma-70 region 2 AM474_RS26395 PF04545 Sigma-70, region 4 AM474_RS26395 PF04539 Sigma-70 region 3 AM474_RS26400 PF00072 Response regulator receiver domain AM474_RS26405 PF04344 Chemotaxis phosphatase, CheZ AM474_RS26410 PF00072 Response regulator receiver domain AM474_RS26410 PF01627 Hpt domain AM474_RS26410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS26410 PF02895 Signal transducing histidine kinase, homodimeric domain AM474_RS26410 PF01584 CheW-like domain AM474_RS26415 PF01339 CheB methylesterase AM474_RS26415 PF00072 Response regulator receiver domain AM474_RS26420 PF01618 MotA/TolQ/ExbB proton channel family AM474_RS26425 PF00691 OmpA family AM474_RS26425 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM474_RS26430 PF13614 AAA domain AM474_RS26440 PF01584 CheW-like domain AM474_RS26465 PF02578 Multi-copper polyphenol oxidoreductase laccase AM474_RS26480 PF01312 FlhB HrpN YscU SpaS Family AM474_RS26490 PF00005 ABC transporter AM474_RS26495 PF03379 CcmB protein AM474_RS26500 PF01578 Cytochrome C assembly protein AM474_RS26505 PF04995 Heme exporter protein D (CcmD) AM474_RS26510 PF03100 CcmE AM474_RS26515 PF01578 Cytochrome C assembly protein AM474_RS26515 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM474_RS26520 PF08534 Redoxin AM474_RS26525 PF03918 Cytochrome C biogenesis protein AM474_RS26540 PF00072 Response regulator receiver domain AM474_RS26540 PF00196 Bacterial regulatory proteins, luxR family AM474_RS26550 PF03576 Peptidase family S58 AM474_RS26555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM474_RS26555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM474_RS26560 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS26560 PF04324 BFD-like [2Fe-2S] binding domain AM474_RS26565 PF04324 BFD-like [2Fe-2S] binding domain AM474_RS26565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS26570 PF00455 DeoR C terminal sensor domain AM474_RS26570 PF08220 DeoR-like helix-turn-helix domain AM474_RS26575 PF04346 Ethanolamine utilisation protein, EutH AM474_RS26600 PF00027 Cyclic nucleotide-binding domain AM474_RS26600 PF00520 Ion transport protein AM474_RS26605 PF03253 Urea transporter AM474_RS26610 PF02887 Pyruvate kinase, alpha/beta domain AM474_RS26610 PF00224 Pyruvate kinase, barrel domain AM474_RS26615 PF05161 MOFRL family AM474_RS26615 PF13660 Domain of unknown function (DUF4147) AM474_RS26620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM474_RS26620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM474_RS26625 PF01261 Xylose isomerase-like TIM barrel AM474_RS26630 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS26630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS26630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS26640 PF00440 Bacterial regulatory proteins, tetR family AM474_RS26640 PF08362 YcdC-like protein, C-terminal region AM474_RS26645 PF06463 Molybdenum Cofactor Synthesis C AM474_RS26645 PF04055 Radical SAM superfamily AM474_RS26655 PF00860 Permease family AM474_RS26675 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS26675 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AM474_RS26675 PF13296 Putative type VI secretion system Rhs element Vgr AM474_RS26680 PF05638 Type VI secretion system effector, Hcp AM474_RS26690 PF04115 Ureidoglycolate lyase AM474_RS26695 PF03561 Allantoicase repeat AM474_RS26705 PF01522 Polysaccharide deacetylase AM474_RS26710 PF00576 HIUase/Transthyretin family AM474_RS26715 PF00860 Permease family AM474_RS26730 PF01979 Amidohydrolase family AM474_RS26740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM474_RS26740 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM474_RS26745 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS26745 PF01799 [2Fe-2S] binding domain AM474_RS26750 PF00487 Fatty acid desaturase AM474_RS26760 PF02463 RecF/RecN/SMC N terminal domain AM474_RS26760 PF06470 SMC proteins Flexible Hinge Domain AM474_RS26765 PF04354 ZipA, C-terminal FtsZ-binding domain AM474_RS26770 PF12826 Helix-hairpin-helix motif AM474_RS26770 PF01653 NAD-dependent DNA ligase adenylation domain AM474_RS26770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM474_RS26770 PF03120 NAD-dependent DNA ligase OB-fold domain AM474_RS26770 PF00533 BRCA1 C Terminus (BRCT) domain AM474_RS26790 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM474_RS26790 PF12169 DNA polymerase III subunits gamma and tau domain III AM474_RS26790 PF12170 DNA polymerase III tau subunit V interacting with alpha AM474_RS26795 PF02575 YbaB/EbfC DNA-binding family AM474_RS26800 PF02132 RecR protein AM474_RS26800 PF13662 Toprim domain AM474_RS26805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS26805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS26805 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS26810 PF03691 Uncharacterised protein family (UPF0167) AM474_RS26815 PF00106 short chain dehydrogenase AM474_RS26820 PF00743 Flavin-binding monooxygenase-like AM474_RS26830 PF00893 Small Multidrug Resistance protein AM474_RS26835 PF00893 Small Multidrug Resistance protein AM474_RS26845 PF00156 Phosphoribosyl transferase domain AM474_RS26850 PF00325 Bacterial regulatory proteins, crp family AM474_RS26850 PF00027 Cyclic nucleotide-binding domain AM474_RS26860 PF06969 HemN C-terminal domain AM474_RS26860 PF04055 Radical SAM superfamily AM474_RS26875 PF00403 Heavy-metal-associated domain AM474_RS26885 PF13746 4Fe-4S dicluster domain AM474_RS26885 PF12801 4Fe-4S binding domain AM474_RS26885 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AM474_RS26895 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AM474_RS26895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS26910 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM474_RS26915 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AM474_RS26915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS26930 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM474_RS26935 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AM474_RS26935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS26950 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM474_RS26965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS26965 PF08447 PAS fold AM474_RS26970 PF00330 Aconitase family (aconitate hydratase) AM474_RS26970 PF00694 Aconitase C-terminal domain AM474_RS26975 PF01728 FtsJ-like methyltransferase AM474_RS26975 PF18125 RlmM ferredoxin-like domain AM474_RS26980 PF01206 Sulfurtransferase TusA AM474_RS26985 PF01266 FAD dependent oxidoreductase AM474_RS26990 PF00120 Glutamine synthetase, catalytic domain AM474_RS27000 PF01266 FAD dependent oxidoreductase AM474_RS27005 PF01042 Endoribonuclease L-PSP AM474_RS27020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS27020 PF03466 LysR substrate binding domain AM474_RS27035 PF06940 Domain of unknown function (DUF1287) AM474_RS27040 PF06865 Pyrimidine/purine nucleoside phosphorylase AM474_RS27050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM474_RS27050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM474_RS27065 PF03692 Putative zinc- or iron-chelating domain AM474_RS27070 PF01852 START domain AM474_RS27075 PF00285 Citrate synthase, C-terminal domain AM474_RS27080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM474_RS27085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM474_RS27090 PF02910 Fumarate reductase flavoprotein C-term AM474_RS27090 PF00890 FAD binding domain AM474_RS27095 PF13085 2Fe-2S iron-sulfur cluster binding domain AM474_RS27100 PF02779 Transketolase, pyrimidine binding domain AM474_RS27100 PF16870 2-oxoglutarate dehydrogenase C-terminal AM474_RS27100 PF16078 2-oxoglutarate dehydrogenase N-terminus AM474_RS27100 PF00676 Dehydrogenase E1 component AM474_RS27105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM474_RS27105 PF02817 e3 binding domain AM474_RS27105 PF00364 Biotin-requiring enzyme AM474_RS27110 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS27110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM474_RS27115 PF08442 ATP-grasp domain AM474_RS27115 PF00549 CoA-ligase AM474_RS27120 PF00549 CoA-ligase AM474_RS27120 PF02629 CoA binding domain AM474_RS27125 PF05525 Branched-chain amino acid transport protein AM474_RS27155 PF00183 Hsp90 protein AM474_RS27155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS27165 PF02548 Ketopantoate hydroxymethyltransferase AM474_RS27170 PF12833 Helix-turn-helix domain AM474_RS27170 PF02311 AraC-like ligand binding domain AM474_RS27175 PF00034 Cytochrome c AM474_RS27175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM474_RS27175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS27180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS27180 PF00034 Cytochrome c AM474_RS27180 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM474_RS27185 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS27185 PF01799 [2Fe-2S] binding domain AM474_RS27190 PF12802 MarR family AM474_RS27210 PF01638 HxlR-like helix-turn-helix AM474_RS27215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS27215 PF00672 HAMP domain AM474_RS27215 PF12729 Four helix bundle sensory module for signal transduction AM474_RS27220 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS27220 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS27225 PF07977 FabA-like domain AM474_RS27230 PF01627 Hpt domain AM474_RS27230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS27230 PF00672 HAMP domain AM474_RS27230 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM474_RS27230 PF00072 Response regulator receiver domain AM474_RS27230 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS27240 PF07715 TonB-dependent Receptor Plug Domain AM474_RS27240 PF00593 TonB dependent receptor AM474_RS27245 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM474_RS27245 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM474_RS27260 PF00501 AMP-binding enzyme AM474_RS27265 PF03061 Thioesterase superfamily AM474_RS27290 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS27290 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS27300 PF01594 AI-2E family transporter AM474_RS27305 PF07690 Major Facilitator Superfamily AM474_RS27310 PF07729 FCD domain AM474_RS27310 PF00392 Bacterial regulatory proteins, gntR family AM474_RS27315 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM474_RS27315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM474_RS27315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM474_RS27320 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS27325 PF09339 IclR helix-turn-helix domain AM474_RS27330 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS27330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS27330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS27340 PF03814 Potassium-transporting ATPase A subunit AM474_RS27350 PF02669 K+-transporting ATPase, c chain AM474_RS27355 PF02702 Osmosensitive K+ channel His kinase sensor domain AM474_RS27355 PF13492 GAF domain AM474_RS27355 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS27355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS27355 PF13493 Domain of unknown function (DUF4118) AM474_RS27360 PF00486 Transcriptional regulatory protein, C terminal AM474_RS27360 PF00072 Response regulator receiver domain AM474_RS27365 PF04960 Glutaminase AM474_RS27375 PF01734 Patatin-like phospholipase AM474_RS27385 PF02769 AIR synthase related protein, C-terminal domain AM474_RS27385 PF00586 AIR synthase related protein, N-terminal domain AM474_RS27400 PF01613 Flavin reductase like domain AM474_RS27410 PF00672 HAMP domain AM474_RS27410 PF16591 Helical bimodular sensor domain AM474_RS27410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS27415 PF01740 STAS domain AM474_RS27415 PF00916 Sulfate permease family AM474_RS27425 PF00107 Zinc-binding dehydrogenase AM474_RS27425 PF16884 N-terminal domain of oxidoreductase AM474_RS27440 PF03594 Benzoate membrane transport protein AM474_RS27455 PF00155 Aminotransferase class I and II AM474_RS27460 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS27470 PF05593 RHS Repeat AM474_RS27470 PF03527 RHS protein AM474_RS27480 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS27485 PF05638 Type VI secretion system effector, Hcp AM474_RS27500 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS27515 PF05947 Type VI secretion system, TssF AM474_RS27525 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS27525 PF17871 AAA lid domain AM474_RS27525 PF07724 AAA domain (Cdc48 subfamily) AM474_RS27525 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS27530 PF00072 Response regulator receiver domain AM474_RS27530 PF00158 Sigma-54 interaction domain AM474_RS27530 PF02954 Bacterial regulatory protein, Fis family AM474_RS27550 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM474_RS27560 PF06744 Type VI secretion protein IcmF C-terminal AM474_RS27560 PF06761 Intracellular multiplication and human macrophage-killing AM474_RS27560 PF14331 ImcF-related N-terminal domain AM474_RS27570 PF00069 Protein kinase domain AM474_RS27570 PF03793 PASTA domain AM474_RS27580 PF01814 Hemerythrin HHE cation binding domain AM474_RS27585 PF01227 GTP cyclohydrolase I AM474_RS27590 PF01713 Smr domain AM474_RS27605 PF05175 Methyltransferase small domain AM474_RS27620 PF01264 Chorismate synthase AM474_RS27630 PF00596 Class II Aldolase and Adducin N-terminal domain AM474_RS27635 PF03079 ARD/ARD' family AM474_RS27650 PF00730 HhH-GPD superfamily base excision DNA repair protein AM474_RS27650 PF02805 Metal binding domain of Ada AM474_RS27650 PF06029 AlkA N-terminal domain AM474_RS27650 PF12833 Helix-turn-helix domain AM474_RS27655 PF17284 Spermidine synthase tetramerisation domain AM474_RS27665 PF16347 Domain of unknown function (DUF4976) AM474_RS27665 PF00884 Sulfatase AM474_RS27670 PF01312 FlhB HrpN YscU SpaS Family AM474_RS27675 PF01311 Bacterial export proteins, family 1 AM474_RS27680 PF01313 Bacterial export proteins, family 3 AM474_RS27685 PF00813 FliP family AM474_RS27690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM474_RS27705 PF18269 T3SS EscN ATPase C-terminal domain AM474_RS27705 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM474_RS27705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM474_RS27710 PF07201 HrpJ-like domain AM474_RS27715 PF09059 TyeA AM474_RS27735 PF00771 FHIPEP family AM474_RS27740 PF09621 Type III secretion system regulator (LcrR) AM474_RS27750 PF04792 V antigen (LcrV) protein AM474_RS27755 PF07720 Tetratricopeptide repeat AM474_RS27760 PF04888 Secretion system effector C (SseC) like family AM474_RS27770 PF05932 Tir chaperone protein (CesT) family AM474_RS27775 PF18286 Type III secretion system ExsE AM474_RS27780 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM474_RS27785 PF12833 Helix-turn-helix domain AM474_RS27790 PF16806 Antiactivator protein ExsD AM474_RS27795 PF05932 Tir chaperone protein (CesT) family AM474_RS27800 PF00263 Bacterial type II and III secretion system protein AM474_RS27800 PF03958 Bacterial type II/III secretion system short domain AM474_RS27805 PF16693 Inner membrane component of T3SS, periplasmic domain AM474_RS27805 PF16697 Inner membrane component of T3SS, cytoplasmic domain AM474_RS27810 PF08988 Type III secretion system, cytoplasmic E component of needle AM474_RS27815 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AM474_RS27820 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) AM474_RS27830 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI AM474_RS27835 PF01514 Secretory protein of YscJ/FliF family AM474_RS27840 PF06578 YOP proteins translocation protein K (YscK) AM474_RS27845 PF02108 Flagellar assembly protein FliH AM474_RS27850 PF00933 Glycosyl hydrolase family 3 N terminal domain AM474_RS27850 PF14310 Fibronectin type III-like domain AM474_RS27850 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM474_RS27855 PF03707 Bacterial signalling protein N terminal repeat AM474_RS27855 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS27855 PF00563 EAL domain AM474_RS27865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM474_RS27865 PF00117 Glutamine amidotransferase class-I AM474_RS27875 PF14403 Circularly permuted ATP-grasp type 2 AM474_RS27880 PF04168 A predicted alpha-helical domain with a conserved ER motif. AM474_RS27880 PF14403 Circularly permuted ATP-grasp type 2 AM474_RS27885 PF08379 Bacterial transglutaminase-like N-terminal region AM474_RS27885 PF01841 Transglutaminase-like superfamily AM474_RS27905 PF02803 Thiolase, C-terminal domain AM474_RS27905 PF00108 Thiolase, N-terminal domain AM474_RS27910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM474_RS27910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM474_RS27910 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS27915 PF03466 LysR substrate binding domain AM474_RS27915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS27920 PF00248 Aldo/keto reductase family AM474_RS27935 PF02540 NAD synthase AM474_RS27935 PF00958 GMP synthase C terminal domain AM474_RS27935 PF00117 Glutamine amidotransferase class-I AM474_RS27975 PF00793 DAHP synthetase I family AM474_RS27990 PF02558 Ketopantoate reductase PanE/ApbA AM474_RS27990 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM474_RS28000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS28000 PF03466 LysR substrate binding domain AM474_RS28010 PF01507 Phosphoadenosine phosphosulfate reductase family AM474_RS28020 PF00425 chorismate binding enzyme AM474_RS28020 PF04715 Anthranilate synthase component I, N terminal region AM474_RS28025 PF00196 Bacterial regulatory proteins, luxR family AM474_RS28025 PF17874 MalT-like TPR region AM474_RS28030 PF00196 Bacterial regulatory proteins, luxR family AM474_RS28030 PF17874 MalT-like TPR region AM474_RS28075 PF08443 RimK-like ATP-grasp domain AM474_RS28075 PF18030 RimK PreATP-grasp domain AM474_RS28080 PF03618 Kinase/pyrophosphorylase AM474_RS28090 PF02896 PEP-utilising enzyme, TIM barrel domain AM474_RS28090 PF00391 PEP-utilising enzyme, mobile domain AM474_RS28090 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM474_RS28100 PF03737 Aldolase/RraA AM474_RS28105 PF01544 CorA-like Mg2+ transporter protein AM474_RS28115 PF05552 Conserved TM helix AM474_RS28125 PF00691 OmpA family AM474_RS28125 PF05736 OprF membrane domain AM474_RS28130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM474_RS28135 PF04324 BFD-like [2Fe-2S] binding domain AM474_RS28135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM474_RS28135 PF00384 Molybdopterin oxidoreductase AM474_RS28135 PF01568 Molydopterin dinucleotide binding domain AM474_RS28140 PF00355 Rieske [2Fe-2S] domain AM474_RS28145 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM474_RS28145 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS28145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM474_RS28145 PF04324 BFD-like [2Fe-2S] binding domain AM474_RS28145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM474_RS28150 PF00069 Protein kinase domain AM474_RS28150 PF03793 PASTA domain AM474_RS28155 PF07690 Major Facilitator Superfamily AM474_RS28165 PF01339 CheB methylesterase AM474_RS28165 PF00072 Response regulator receiver domain AM474_RS28175 PF11791 Aconitate B N-terminal domain AM474_RS28175 PF00330 Aconitase family (aconitate hydratase) AM474_RS28175 PF06434 Aconitate hydratase 2 N-terminus AM474_RS28190 PF00582 Universal stress protein family AM474_RS28195 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM474_RS28205 PF00149 Calcineurin-like phosphoesterase AM474_RS28210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM474_RS28215 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM474_RS28215 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM474_RS28220 PF09190 DALR domain AM474_RS28220 PF01406 tRNA synthetases class I (C) catalytic domain AM474_RS28225 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM474_RS28225 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM474_RS28255 PF00144 Beta-lactamase AM474_RS28260 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS28260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS28260 PF00672 HAMP domain AM474_RS28265 PF00486 Transcriptional regulatory protein, C terminal AM474_RS28265 PF00072 Response regulator receiver domain AM474_RS28275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM474_RS28275 PF05697 Bacterial trigger factor protein (TF) AM474_RS28275 PF05698 Bacterial trigger factor protein (TF) C-terminus AM474_RS28280 PF00574 Clp protease AM474_RS28285 PF06689 ClpX C4-type zinc finger AM474_RS28285 PF07724 AAA domain (Cdc48 subfamily) AM474_RS28285 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS28290 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS28290 PF05362 Lon protease (S16) C-terminal proteolytic domain AM474_RS28290 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM474_RS28295 PF00216 Bacterial DNA-binding protein AM474_RS28305 PF05698 Bacterial trigger factor protein (TF) C-terminus AM474_RS28315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM474_RS28315 PF00005 ABC transporter AM474_RS28320 PF12911 N-terminal TM domain of oligopeptide transport permease C AM474_RS28320 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS28325 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS28330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM474_RS28335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM474_RS28340 PF01464 Transglycosylase SLT domain AM474_RS28340 PF01476 LysM domain AM474_RS28345 PF00753 Metallo-beta-lactamase superfamily AM474_RS28345 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM474_RS28355 PF00075 RNase H AM474_RS28360 PF00929 Exonuclease AM474_RS28370 PF01276 Orn/Lys/Arg decarboxylase, major domain AM474_RS28370 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM474_RS28370 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM474_RS28375 PF13520 Amino acid permease AM474_RS28380 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM474_RS28385 PF00378 Enoyl-CoA hydratase/isomerase AM474_RS28395 PF00293 NUDIX domain AM474_RS28395 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AM474_RS28395 PF09297 NADH pyrophosphatase zinc ribbon domain AM474_RS28400 PF01925 Sulfite exporter TauE/SafE AM474_RS28405 PF00565 Staphylococcal nuclease homologue AM474_RS28410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS28410 PF03466 LysR substrate binding domain AM474_RS28440 PF08496 Peptidase family S49 N-terminal AM474_RS28440 PF01343 Peptidase family S49 AM474_RS28445 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS28445 PF00107 Zinc-binding dehydrogenase AM474_RS28470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM474_RS28470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM474_RS28485 PF04055 Radical SAM superfamily AM474_RS28505 PF02607 B12 binding domain AM474_RS28505 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM474_RS28505 PF00809 Pterin binding enzyme AM474_RS28505 PF02574 Homocysteine S-methyltransferase AM474_RS28505 PF02310 B12 binding domain AM474_RS28525 PF01521 Iron-sulphur cluster biosynthesis AM474_RS28525 PF01106 NifU-like domain AM474_RS28535 PF06906 Protein of unknown function (DUF1272) AM474_RS28540 PF12833 Helix-turn-helix domain AM474_RS28540 PF01965 DJ-1/PfpI family AM474_RS28545 PF00563 EAL domain AM474_RS28545 PF01590 GAF domain AM474_RS28545 PF00360 Phytochrome region AM474_RS28545 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS28555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS28555 PF03466 LysR substrate binding domain AM474_RS28560 PF03448 MgtE intracellular N domain AM474_RS28560 PF01769 Divalent cation transporter AM474_RS28560 PF00571 CBS domain AM474_RS28570 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM474_RS28575 PF05661 Protein of unknown function (DUF808) AM474_RS28580 PF02386 Cation transport protein AM474_RS28585 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM474_RS28590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS28590 PF03466 LysR substrate binding domain AM474_RS28595 PF04072 Leucine carboxyl methyltransferase AM474_RS28600 PF00005 ABC transporter AM474_RS28600 PF03459 TOBE domain AM474_RS28605 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS28615 PF00440 Bacterial regulatory proteins, tetR family AM474_RS28615 PF08361 MAATS-type transcriptional repressor, C-terminal region AM474_RS28620 PF18081 Fanconi anemia-associated nuclease SAP domain AM474_RS28620 PF08774 VRR-NUC domain AM474_RS28640 PF00263 Bacterial type II and III secretion system protein AM474_RS28640 PF03958 Bacterial type II/III secretion system short domain AM474_RS28645 PF00550 Phosphopantetheine attachment site AM474_RS28655 PF01551 Peptidase family M23 AM474_RS28680 PF00005 ABC transporter AM474_RS28680 PF03412 Peptidase C39 family AM474_RS28680 PF00664 ABC transporter transmembrane region AM474_RS28685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS28685 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS28700 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM474_RS28705 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS28705 PF01799 [2Fe-2S] binding domain AM474_RS28710 PF00893 Small Multidrug Resistance protein AM474_RS28715 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM474_RS28730 PF00136 DNA polymerase family B AM474_RS28730 PF03104 DNA polymerase family B, exonuclease domain AM474_RS28750 PF00043 Glutathione S-transferase, C-terminal domain AM474_RS28750 PF13417 Glutathione S-transferase, N-terminal domain AM474_RS28765 PF01804 Penicillin amidase AM474_RS28790 PF00196 Bacterial regulatory proteins, luxR family AM474_RS28790 PF03472 Autoinducer binding domain AM474_RS28795 PF03284 Phenazine biosynthesis protein A/B AM474_RS28800 PF03284 Phenazine biosynthesis protein A/B AM474_RS28805 PF01474 Class-II DAHP synthetase family AM474_RS28810 PF00857 Isochorismatase family AM474_RS28815 PF00425 chorismate binding enzyme AM474_RS28815 PF00117 Glutamine amidotransferase class-I AM474_RS28820 PF02567 Phenazine biosynthesis-like protein AM474_RS28825 PF01243 Pyridoxamine 5'-phosphate oxidase AM474_RS28825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM474_RS28840 PF07690 Major Facilitator Superfamily AM474_RS28850 PF03929 PepSY-associated TM region AM474_RS28855 PF00593 TonB dependent receptor AM474_RS28855 PF07715 TonB-dependent Receptor Plug Domain AM474_RS28860 PF04773 FecR protein AM474_RS28860 PF16220 Domain of unknown function (DUF4880) AM474_RS28865 PF04542 Sigma-70 region 2 AM474_RS28865 PF08281 Sigma-70, region 4 AM474_RS28885 PF13556 PucR C-terminal helix-turn-helix domain AM474_RS28885 PF07905 Purine catabolism regulatory protein-like family AM474_RS28900 PF01266 FAD dependent oxidoreductase AM474_RS28915 PF03477 ATP cone domain AM474_RS28915 PF02867 Ribonucleotide reductase, barrel domain AM474_RS28915 PF00317 Ribonucleotide reductase, all-alpha domain AM474_RS28920 PF01795 MraW methylase family AM474_RS28925 PF07715 TonB-dependent Receptor Plug Domain AM474_RS28925 PF00593 TonB dependent receptor AM474_RS28930 PF02514 CobN/Magnesium Chelatase AM474_RS28945 PF18381 YcaO cyclodehydratase C-terminal domain AM474_RS28945 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM474_RS28950 PF01717 Cobalamin-independent synthase, Catalytic domain AM474_RS28950 PF08267 Cobalamin-independent synthase, N-terminal domain AM474_RS28955 PF13302 Acetyltransferase (GNAT) domain AM474_RS28965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM474_RS28965 PF08447 PAS fold AM474_RS28965 PF13426 PAS domain AM474_RS28970 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM474_RS28970 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS28970 PF01799 [2Fe-2S] binding domain AM474_RS28975 PF00941 FAD binding domain in molybdopterin dehydrogenase AM474_RS28975 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM474_RS28980 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM474_RS28980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM474_RS29010 PF00199 Catalase AM474_RS29035 PF00072 Response regulator receiver domain AM474_RS29035 PF00158 Sigma-54 interaction domain AM474_RS29035 PF02954 Bacterial regulatory protein, Fis family AM474_RS29040 PF13407 Periplasmic binding protein domain AM474_RS29045 PF00005 ABC transporter AM474_RS29050 PF02653 Branched-chain amino acid transport system / permease component AM474_RS29055 PF00356 Bacterial regulatory proteins, lacI family AM474_RS29060 PF00294 pfkB family carbohydrate kinase AM474_RS29105 PF02673 Bacitracin resistance protein BacA AM474_RS29110 PF00313 'Cold-shock' DNA-binding domain AM474_RS29115 PF03466 LysR substrate binding domain AM474_RS29115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS29120 PF02525 Flavodoxin-like fold AM474_RS29130 PF12848 ABC transporter AM474_RS29130 PF00005 ABC transporter AM474_RS29170 PF05525 Branched-chain amino acid transport protein AM474_RS29175 PF00884 Sulfatase AM474_RS29175 PF08019 Phosphoethanolamine transferase EptA/EptB AM474_RS29180 PF05193 Peptidase M16 inactive domain AM474_RS29180 PF00675 Insulinase (Peptidase family M16) AM474_RS29195 PF09456 RcsC Alpha-Beta-Loop (ABL) AM474_RS29195 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS29195 PF00072 Response regulator receiver domain AM474_RS29195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS29200 PF00892 EamA-like transporter family AM474_RS29205 PF00196 Bacterial regulatory proteins, luxR family AM474_RS29205 PF00072 Response regulator receiver domain AM474_RS29210 PF05231 MASE1 AM474_RS29210 PF07730 Histidine kinase AM474_RS29210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS29215 PF00072 Response regulator receiver domain AM474_RS29215 PF00196 Bacterial regulatory proteins, luxR family AM474_RS29225 PF01011 PQQ enzyme repeat AM474_RS29225 PF13360 PQQ-like domain AM474_RS29230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS29235 PF00171 Aldehyde dehydrogenase family AM474_RS29240 PF08042 PqqA family AM474_RS29245 PF12706 Beta-lactamase superfamily domain AM474_RS29250 PF03070 TENA/THI-4/PQQC family AM474_RS29255 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AM474_RS29260 PF04055 Radical SAM superfamily AM474_RS29260 PF13186 Iron-sulfur cluster-binding domain AM474_RS29270 PF00465 Iron-containing alcohol dehydrogenase AM474_RS29275 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS29275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS29280 PF07690 Major Facilitator Superfamily AM474_RS29300 PF00501 AMP-binding enzyme AM474_RS29300 PF13193 AMP-binding enzyme C-terminal domain AM474_RS29305 PF03466 LysR substrate binding domain AM474_RS29305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS29310 PF01144 Coenzyme A transferase AM474_RS29315 PF01144 Coenzyme A transferase AM474_RS29320 PF00108 Thiolase, N-terminal domain AM474_RS29320 PF02803 Thiolase, C-terminal domain AM474_RS29325 PF02667 Short chain fatty acid transporter AM474_RS29330 PF00106 short chain dehydrogenase AM474_RS29340 PF00158 Sigma-54 interaction domain AM474_RS29340 PF00989 PAS fold AM474_RS29340 PF02954 Bacterial regulatory protein, Fis family AM474_RS29345 PF07690 Major Facilitator Superfamily AM474_RS29350 PF13417 Glutathione S-transferase, N-terminal domain AM474_RS29355 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS29360 PF04209 homogentisate 1,2-dioxygenase AM474_RS29370 PF00682 HMGL-like AM474_RS29375 PF02785 Biotin carboxylase C-terminal domain AM474_RS29375 PF00289 Biotin carboxylase, N-terminal domain AM474_RS29375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM474_RS29375 PF00364 Biotin-requiring enzyme AM474_RS29385 PF01039 Carboxyl transferase domain AM474_RS29390 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS29390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS29390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS29395 PF13411 MerR HTH family regulatory protein AM474_RS29400 PF06977 SdiA-regulated AM474_RS29410 PF00873 AcrB/AcrD/AcrF family AM474_RS29415 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS29415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS29420 PF08361 MAATS-type transcriptional repressor, C-terminal region AM474_RS29420 PF00440 Bacterial regulatory proteins, tetR family AM474_RS29430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM474_RS29430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM474_RS29430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM474_RS29435 PF00483 Nucleotidyl transferase AM474_RS29440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM474_RS29445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM474_RS29445 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS29450 PF13593 SBF-like CPA transporter family (DUF4137) AM474_RS29460 PF01037 Lrp/AsnC ligand binding domain AM474_RS29460 PF13404 AsnC-type helix-turn-helix domain AM474_RS29480 PF00155 Aminotransferase class I and II AM474_RS29480 PF00392 Bacterial regulatory proteins, gntR family AM474_RS29485 PF04954 Siderophore-interacting protein AM474_RS29485 PF08021 Siderophore-interacting FAD-binding domain AM474_RS29495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS29495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS29495 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS29510 PF00120 Glutamine synthetase, catalytic domain AM474_RS29515 PF00324 Amino acid permease AM474_RS29525 PF00375 Sodium:dicarboxylate symporter family AM474_RS29530 PF00849 RNA pseudouridylate synthase AM474_RS29540 PF01809 Putative membrane protein insertion efficiency factor AM474_RS29550 PF12833 Helix-turn-helix domain AM474_RS29550 PF06719 AraC-type transcriptional regulator N-terminus AM474_RS29565 PF04542 Sigma-70 region 2 AM474_RS29565 PF08281 Sigma-70, region 4 AM474_RS29575 PF02560 Cyanate lyase C-terminal domain AM474_RS29580 PF00484 Carbonic anhydrase AM474_RS29585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS29585 PF03466 LysR substrate binding domain AM474_RS29590 PF07690 Major Facilitator Superfamily AM474_RS29595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS29595 PF03466 LysR substrate binding domain AM474_RS29600 PF00593 TonB dependent receptor AM474_RS29600 PF07715 TonB-dependent Receptor Plug Domain AM474_RS29605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM474_RS29610 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS29615 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS29615 PF12911 N-terminal TM domain of oligopeptide transport permease C AM474_RS29620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM474_RS29620 PF00005 ABC transporter AM474_RS29625 PF00266 Aminotransferase class-V AM474_RS29640 PF05275 Copper resistance protein B precursor (CopB) AM474_RS29645 PF07731 Multicopper oxidase AM474_RS29645 PF00394 Multicopper oxidase AM474_RS29645 PF07732 Multicopper oxidase AM474_RS29660 PF12832 MFS_1 like family AM474_RS29665 PF16861 Carbamoyltransferase C-terminus AM474_RS29665 PF02543 Carbamoyltransferase N-terminus AM474_RS29675 PF07715 TonB-dependent Receptor Plug Domain AM474_RS29675 PF00593 TonB dependent receptor AM474_RS29680 PF00679 Elongation factor G C-terminus AM474_RS29680 PF14492 Elongation Factor G, domain II AM474_RS29680 PF00009 Elongation factor Tu GTP binding domain AM474_RS29680 PF03144 Elongation factor Tu domain 2 AM474_RS29680 PF03764 Elongation factor G, domain IV AM474_RS29685 PF00563 EAL domain AM474_RS29685 PF08447 PAS fold AM474_RS29685 PF08448 PAS fold AM474_RS29685 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS29690 PF00583 Acetyltransferase (GNAT) family AM474_RS29690 PF00795 Carbon-nitrogen hydrolase AM474_RS29705 PF03466 LysR substrate binding domain AM474_RS29705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS29725 PF00324 Amino acid permease AM474_RS29735 PF00266 Aminotransferase class-V AM474_RS29740 PF04199 Putative cyclase AM474_RS29745 PF01037 Lrp/AsnC ligand binding domain AM474_RS29750 PF00355 Rieske [2Fe-2S] domain AM474_RS29750 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM474_RS29755 PF00733 Asparagine synthase AM474_RS29755 PF13537 Glutamine amidotransferase domain AM474_RS29760 PF00866 Ring hydroxylating beta subunit AM474_RS29765 PF00561 alpha/beta hydrolase fold AM474_RS29780 PF07715 TonB-dependent Receptor Plug Domain AM474_RS29780 PF00593 TonB dependent receptor AM474_RS29785 PF00296 Luciferase-like monooxygenase AM474_RS29795 PF07690 Major Facilitator Superfamily AM474_RS29800 PF04542 Sigma-70 region 2 AM474_RS29800 PF04545 Sigma-70, region 4 AM474_RS29815 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS29815 PF12833 Helix-turn-helix domain AM474_RS29820 PF00743 Flavin-binding monooxygenase-like AM474_RS29825 PF07859 alpha/beta hydrolase fold AM474_RS29830 PF00106 short chain dehydrogenase AM474_RS29840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM474_RS29840 PF00205 Thiamine pyrophosphate enzyme, central domain AM474_RS29840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM474_RS29850 PF02626 Carboxyltransferase domain, subdomain A and B AM474_RS29860 PF03746 LamB/YcsF family AM474_RS29865 PF03573 outer membrane porin, OprD family AM474_RS29870 PF07690 Major Facilitator Superfamily AM474_RS29875 PF03466 LysR substrate binding domain AM474_RS29875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS29880 PF07286 Protein of unknown function (DUF1445) AM474_RS29895 PF12833 Helix-turn-helix domain AM474_RS29895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM474_RS29895 PF02805 Metal binding domain of Ada AM474_RS29895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM474_RS29920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS29920 PF03466 LysR substrate binding domain AM474_RS29930 PF03466 LysR substrate binding domain AM474_RS29930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS29935 PF00732 GMC oxidoreductase AM474_RS29935 PF05199 GMC oxidoreductase AM474_RS29940 PF00171 Aldehyde dehydrogenase family AM474_RS29945 PF02195 ParB-like nuclease domain AM474_RS29955 PF01507 Phosphoadenosine phosphosulfate reductase family AM474_RS29955 PF11922 Domain of unknown function (DUF3440) AM474_RS29965 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM474_RS29965 PF02753 Pili assembly chaperone PapD, C-terminal domain AM474_RS29970 PF13954 PapC N-terminal domain AM474_RS29970 PF00577 Outer membrane usher protein AM474_RS29970 PF13953 PapC C-terminal domain AM474_RS29980 PF02753 Pili assembly chaperone PapD, C-terminal domain AM474_RS29980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM474_RS30000 PF04239 Protein of unknown function (DUF421) AM474_RS30015 PF13298 DNA polymerase Ligase (LigD) AM474_RS30015 PF01068 ATP dependent DNA ligase domain AM474_RS30015 PF04679 ATP dependent DNA ligase C terminal region AM474_RS30030 PF02464 Competence-damaged protein AM474_RS30050 PF00343 Carbohydrate phosphorylase AM474_RS30065 PF18011 C-terminal domain found in long catalases AM474_RS30065 PF06628 Catalase-related immune-responsive AM474_RS30065 PF00199 Catalase AM474_RS30075 PF02308 MgtC family AM474_RS30085 PF02735 Ku70/Ku80 beta-barrel domain AM474_RS30090 PF11896 Domain of unknown function (DUF3416) AM474_RS30090 PF00128 Alpha amylase, catalytic domain AM474_RS30095 PF16657 Maltogenic Amylase, C-terminal domain AM474_RS30095 PF00128 Alpha amylase, catalytic domain AM474_RS30100 PF02806 Alpha amylase, C-terminal all-beta domain AM474_RS30100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM474_RS30100 PF00128 Alpha amylase, catalytic domain AM474_RS30105 PF03706 Lysylphosphatidylglycerol synthase TM region AM474_RS30110 PF13091 PLD-like domain AM474_RS30115 PF03372 Endonuclease/Exonuclease/phosphatase family AM474_RS30125 PF13823 Alcohol dehydrogenase GroES-associated AM474_RS30125 PF00107 Zinc-binding dehydrogenase AM474_RS30125 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS30140 PF00128 Alpha amylase, catalytic domain AM474_RS30140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM474_RS30150 PF00128 Alpha amylase, catalytic domain AM474_RS30155 PF02446 4-alpha-glucanotransferase AM474_RS30160 PF00128 Alpha amylase, catalytic domain AM474_RS30160 PF11941 Domain of unknown function (DUF3459) AM474_RS30160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM474_RS30165 PF08323 Starch synthase catalytic domain AM474_RS30165 PF00534 Glycosyl transferases group 1 AM474_RS30230 PF13426 PAS domain AM474_RS30230 PF00072 Response regulator receiver domain AM474_RS30230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS30245 PF05175 Methyltransferase small domain AM474_RS30245 PF17827 PrmC N-terminal domain AM474_RS30260 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM474_RS30275 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain AM474_RS30275 PF03497 Anthrax toxin LF subunit AM474_RS30280 PF00571 CBS domain AM474_RS30285 PF00128 Alpha amylase, catalytic domain AM474_RS30295 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS30295 PF04324 BFD-like [2Fe-2S] binding domain AM474_RS30300 PF01266 FAD dependent oxidoreductase AM474_RS30305 PF00440 Bacterial regulatory proteins, tetR family AM474_RS30305 PF16925 Tetracyclin repressor-like, C-terminal domain AM474_RS30310 PF00107 Zinc-binding dehydrogenase AM474_RS30310 PF16884 N-terminal domain of oxidoreductase AM474_RS30320 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM474_RS30320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM474_RS30325 PF03707 Bacterial signalling protein N terminal repeat AM474_RS30325 PF00990 Diguanylate cyclase, GGDEF domain AM474_RS30325 PF00563 EAL domain AM474_RS30335 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS30340 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS30355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS30355 PF03466 LysR substrate binding domain AM474_RS30360 PF01970 Tripartite tricarboxylate transporter TctA family AM474_RS30375 PF07690 Major Facilitator Superfamily AM474_RS30380 PF04909 Amidohydrolase AM474_RS30385 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM474_RS30390 PF03573 outer membrane porin, OprD family AM474_RS30395 PF07690 Major Facilitator Superfamily AM474_RS30400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM474_RS30400 PF13378 Enolase C-terminal domain-like AM474_RS30410 PF00171 Aldehyde dehydrogenase family AM474_RS30415 PF04403 Paraquat-inducible protein A AM474_RS30420 PF02470 MlaD protein AM474_RS30430 PF06506 Propionate catabolism activator AM474_RS30430 PF02954 Bacterial regulatory protein, Fis family AM474_RS30430 PF00158 Sigma-54 interaction domain AM474_RS30445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS30445 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS30445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS30460 PF04341 Protein of unknown function, DUF485 AM474_RS30465 PF00474 Sodium:solute symporter family AM474_RS30480 PF00202 Aminotransferase class-III AM474_RS30485 PF00171 Aldehyde dehydrogenase family AM474_RS30490 PF00324 Amino acid permease AM474_RS30495 PF00465 Iron-containing alcohol dehydrogenase AM474_RS30505 PF00743 Flavin-binding monooxygenase-like AM474_RS30515 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AM474_RS30520 PF01266 FAD dependent oxidoreductase AM474_RS30540 PF03176 MMPL family AM474_RS30545 PF14870 Photosynthesis system II assembly factor YCF48 AM474_RS30550 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AM474_RS30555 PF17853 GGDEF-like domain AM474_RS30555 PF13556 PucR C-terminal helix-turn-helix domain AM474_RS30555 PF07905 Purine catabolism regulatory protein-like family AM474_RS30665 PF16653 Saccharopine dehydrogenase C-terminal domain AM474_RS30665 PF03435 Saccharopine dehydrogenase NADP binding domain AM474_RS30690 PF01526 Tn3 transposase DDE domain AM474_RS30690 PF13700 Domain of unknown function (DUF4158) AM474_RS30740 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM474_RS30740 PF12833 Helix-turn-helix domain AM474_RS30750 PF03473 MOSC domain AM474_RS30750 PF03475 3-alpha domain AM474_RS30765 PF02397 Bacterial sugar transferase AM474_RS30770 PF01050 Mannose-6-phosphate isomerase AM474_RS30770 PF00483 Nucleotidyl transferase AM474_RS30775 PF00535 Glycosyl transferase family 2 AM474_RS30780 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM474_RS30780 PF02563 Polysaccharide biosynthesis/export protein AM474_RS30780 PF10531 SLBB domain AM474_RS30815 PF03023 Lipid II flippase MurJ AM474_RS30825 PF00890 FAD binding domain AM474_RS30840 PF01037 Lrp/AsnC ligand binding domain AM474_RS30845 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AM474_RS30845 PF00676 Dehydrogenase E1 component AM474_RS30850 PF02779 Transketolase, pyrimidine binding domain AM474_RS30850 PF02780 Transketolase, C-terminal domain AM474_RS30855 PF00364 Biotin-requiring enzyme AM474_RS30855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM474_RS30855 PF02817 e3 binding domain AM474_RS30860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM474_RS30860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM474_RS30870 PF01235 Sodium:alanine symporter family AM474_RS30875 PF00710 Asparaginase, N-terminal AM474_RS30875 PF17763 Glutaminase/Asparaginase C-terminal domain AM474_RS30895 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AM474_RS30895 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AM474_RS30905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS30905 PF03466 LysR substrate binding domain AM474_RS30910 PF00356 Bacterial regulatory proteins, lacI family AM474_RS30920 PF00294 pfkB family carbohydrate kinase AM474_RS30930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM474_RS30930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM474_RS30935 PF13618 Gluconate 2-dehydrogenase subunit 3 AM474_RS30940 PF05199 GMC oxidoreductase AM474_RS30940 PF00732 GMC oxidoreductase AM474_RS30945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS30945 PF00034 Cytochrome c AM474_RS30955 PF03992 Antibiotic biosynthesis monooxygenase AM474_RS30965 PF00440 Bacterial regulatory proteins, tetR family AM474_RS30970 PF00583 Acetyltransferase (GNAT) family AM474_RS30975 PF03717 Penicillin-binding Protein dimerisation domain AM474_RS30975 PF00905 Penicillin binding protein transpeptidase domain AM474_RS30980 PF00376 MerR family regulatory protein AM474_RS30980 PF09278 MerR, DNA binding AM474_RS30990 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS30990 PF00107 Zinc-binding dehydrogenase AM474_RS30995 PF12833 Helix-turn-helix domain AM474_RS30995 PF06719 AraC-type transcriptional regulator N-terminus AM474_RS31000 PF01022 Bacterial regulatory protein, arsR family AM474_RS31005 PF02040 Arsenical pump membrane protein AM474_RS31010 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM474_RS31015 PF03358 NADPH-dependent FMN reductase AM474_RS31045 PF01435 Peptidase family M48 AM474_RS31060 PF07715 TonB-dependent Receptor Plug Domain AM474_RS31060 PF00593 TonB dependent receptor AM474_RS31070 PF01011 PQQ enzyme repeat AM474_RS31075 PF04966 Carbohydrate-selective porin, OprB family AM474_RS31100 PF02910 Fumarate reductase flavoprotein C-term AM474_RS31100 PF00890 FAD binding domain AM474_RS31105 PF07702 UTRA domain AM474_RS31105 PF00392 Bacterial regulatory proteins, gntR family AM474_RS31110 PF00704 Glycosyl hydrolases family 18 AM474_RS31120 PF00550 Phosphopantetheine attachment site AM474_RS31120 PF00550 Phosphopantetheine attachment site AM474_RS31120 PF00501 AMP-binding enzyme AM474_RS31120 PF00668 Condensation domain AM474_RS31120 PF13193 AMP-binding enzyme C-terminal domain AM474_RS31120 PF13193 AMP-binding enzyme C-terminal domain AM474_RS31120 PF00668 Condensation domain AM474_RS31120 PF00501 AMP-binding enzyme AM474_RS31135 PF13193 AMP-binding enzyme C-terminal domain AM474_RS31135 PF00501 AMP-binding enzyme AM474_RS31135 PF00550 Phosphopantetheine attachment site AM474_RS31135 PF00668 Condensation domain AM474_RS31140 PF01810 LysE type translocator AM474_RS31145 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS31150 PF00005 ABC transporter AM474_RS31160 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM474_RS31170 PF07883 Cupin domain AM474_RS31170 PF01381 Helix-turn-helix AM474_RS31185 PF00144 Beta-lactamase AM474_RS31190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS31190 PF03466 LysR substrate binding domain AM474_RS31195 PF01266 FAD dependent oxidoreductase AM474_RS31205 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM474_RS31205 PF00356 Bacterial regulatory proteins, lacI family AM474_RS31215 PF02447 GntP family permease AM474_RS31225 PF00171 Aldehyde dehydrogenase family AM474_RS31235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS31235 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31240 PF00296 Luciferase-like monooxygenase AM474_RS31245 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS31255 PF00005 ABC transporter AM474_RS31270 PF12833 Helix-turn-helix domain AM474_RS31270 PF02311 AraC-like ligand binding domain AM474_RS31285 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS31290 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS31295 PF08402 TOBE domain AM474_RS31295 PF00005 ABC transporter AM474_RS31300 PF01232 Mannitol dehydrogenase Rossmann domain AM474_RS31300 PF08125 Mannitol dehydrogenase C-terminal domain AM474_RS31305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM474_RS31305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM474_RS31310 PF00294 pfkB family carbohydrate kinase AM474_RS31320 PF02770 Acyl-CoA dehydrogenase, middle domain AM474_RS31320 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS31325 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS31335 PF03180 NLPA lipoprotein AM474_RS31340 PF00005 ABC transporter AM474_RS31340 PF09383 NIL domain AM474_RS31345 PF00528 Binding-protein-dependent transport system inner membrane component AM474_RS31350 PF03009 Glycerophosphoryl diester phosphodiesterase family AM474_RS31355 PF03969 AFG1-like ATPase AM474_RS31360 PF00158 Sigma-54 interaction domain AM474_RS31365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM474_RS31365 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31370 PF00296 Luciferase-like monooxygenase AM474_RS31375 PF03358 NADPH-dependent FMN reductase AM474_RS31385 PF00158 Sigma-54 interaction domain AM474_RS31415 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS31420 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS31435 PF05947 Type VI secretion system, TssF AM474_RS31445 PF00004 ATPase family associated with various cellular activities (AAA) AM474_RS31445 PF07724 AAA domain (Cdc48 subfamily) AM474_RS31445 PF17871 AAA lid domain AM474_RS31445 PF10431 C-terminal, D2-small domain, of ClpB protein AM474_RS31460 PF04717 Type VI secretion system, phage-baseplate injector AM474_RS31460 PF06715 Gp5 C-terminal repeat (3 copies) AM474_RS31475 PF00072 Response regulator receiver domain AM474_RS31475 PF00196 Bacterial regulatory proteins, luxR family AM474_RS31485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM474_RS31490 PF01799 [2Fe-2S] binding domain AM474_RS31490 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS31505 PF01070 FMN-dependent dehydrogenase AM474_RS31510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS31510 PF03466 LysR substrate binding domain AM474_RS31515 PF01475 Ferric uptake regulator family AM474_RS31520 PF01804 Penicillin amidase AM474_RS31525 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM474_RS31540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS31545 PF12704 MacB-like periplasmic core domain AM474_RS31545 PF00005 ABC transporter AM474_RS31545 PF02687 FtsX-like permease family AM474_RS31550 PF02321 Outer membrane efflux protein AM474_RS31575 PF00551 Formyl transferase AM474_RS31580 PF00005 ABC transporter AM474_RS31580 PF00664 ABC transporter transmembrane region AM474_RS31585 PF07715 TonB-dependent Receptor Plug Domain AM474_RS31585 PF00593 TonB dependent receptor AM474_RS31590 PF07859 alpha/beta hydrolase fold AM474_RS31595 PF00501 AMP-binding enzyme AM474_RS31595 PF00550 Phosphopantetheine attachment site AM474_RS31595 PF00668 Condensation domain AM474_RS31595 PF13193 AMP-binding enzyme C-terminal domain AM474_RS31595 PF13193 AMP-binding enzyme C-terminal domain AM474_RS31595 PF00668 Condensation domain AM474_RS31595 PF00501 AMP-binding enzyme AM474_RS31595 PF00550 Phosphopantetheine attachment site AM474_RS31600 PF00668 Condensation domain AM474_RS31600 PF00501 AMP-binding enzyme AM474_RS31600 PF13193 AMP-binding enzyme C-terminal domain AM474_RS31600 PF00550 Phosphopantetheine attachment site AM474_RS31630 PF00005 ABC transporter AM474_RS31635 PF00950 ABC 3 transport family AM474_RS31645 PF00975 Thioesterase domain AM474_RS31650 PF03621 MbtH-like protein AM474_RS31655 PF00202 Aminotransferase class-III AM474_RS31660 PF07995 Glucose / Sorbosone dehydrogenase AM474_RS31670 PF01204 Trehalase AM474_RS31675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS31675 PF03466 LysR substrate binding domain AM474_RS31680 PF05726 Pirin C-terminal cupin domain AM474_RS31680 PF02678 Pirin AM474_RS31685 PF00857 Isochorismatase family AM474_RS31690 PF03573 outer membrane porin, OprD family AM474_RS31710 PF00501 AMP-binding enzyme AM474_RS31710 PF00668 Condensation domain AM474_RS31710 PF13193 AMP-binding enzyme C-terminal domain AM474_RS31710 PF00550 Phosphopantetheine attachment site AM474_RS31715 PF00975 Thioesterase domain AM474_RS31730 PF03976 Polyphosphate kinase 2 (PPK2) AM474_RS31740 PF13533 Biotin-lipoyl like AM474_RS31750 PF04632 Fusaric acid resistance protein family AM474_RS31760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS31760 PF03466 LysR substrate binding domain AM474_RS31775 PF00403 Heavy-metal-associated domain AM474_RS31810 PF01571 Aminomethyltransferase folate-binding domain AM474_RS31810 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM474_RS31815 PF03313 Serine dehydratase alpha chain AM474_RS31815 PF03315 Serine dehydratase beta chain AM474_RS31820 PF00464 Serine hydroxymethyltransferase AM474_RS31830 PF02347 Glycine cleavage system P-protein AM474_RS31835 PF01597 Glycine cleavage H-protein AM474_RS31840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS31840 PF03466 LysR substrate binding domain AM474_RS31845 PF07969 Amidohydrolase family AM474_RS31850 PF18024 Helix-turn-helix domain AM474_RS31850 PF00158 Sigma-54 interaction domain AM474_RS31860 PF11806 Domain of unknown function (DUF3327) AM474_RS31860 PF00756 Putative esterase AM474_RS31940 PF18624 CDI immunity protein AM474_RS31945 PF13332 Hemagglutinin repeat AM474_RS31945 PF05860 haemagglutination activity domain AM474_RS31945 PF04829 Pre-toxin domain with VENN motif AM474_RS31950 PF00872 Transposase, Mutator family AM474_RS31960 PF08479 POTRA domain, ShlB-type AM474_RS31960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM474_RS31960 PF17287 POTRA domain AM474_RS31975 PF00593 TonB dependent receptor AM474_RS31975 PF07715 TonB-dependent Receptor Plug Domain AM474_RS31980 PF16220 Domain of unknown function (DUF4880) AM474_RS31980 PF04773 FecR protein AM474_RS31985 PF04542 Sigma-70 region 2 AM474_RS31985 PF08281 Sigma-70, region 4 AM474_RS31990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS31990 PF03466 LysR substrate binding domain AM474_RS31995 PF07883 Cupin domain AM474_RS32000 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM474_RS32005 PF07690 Major Facilitator Superfamily AM474_RS32010 PF14497 Glutathione S-transferase, C-terminal domain AM474_RS32010 PF02798 Glutathione S-transferase, N-terminal domain AM474_RS32020 PF00067 Cytochrome P450 AM474_RS32025 PF13098 Thioredoxin-like domain AM474_RS32030 PF00578 AhpC/TSA family AM474_RS32035 PF02683 Cytochrome C biogenesis protein transmembrane region AM474_RS32035 PF11412 Disulphide bond corrector protein DsbC AM474_RS32040 PF00072 Response regulator receiver domain AM474_RS32040 PF00486 Transcriptional regulatory protein, C terminal AM474_RS32045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS32045 PF08521 Two-component sensor kinase N-terminal AM474_RS32045 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS32055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM474_RS32060 PF00034 Cytochrome c AM474_RS32065 PF00296 Luciferase-like monooxygenase AM474_RS32095 PF12833 Helix-turn-helix domain AM474_RS32105 PF08659 KR domain AM474_RS32105 PF00550 Phosphopantetheine attachment site AM474_RS32105 PF00109 Beta-ketoacyl synthase, N-terminal domain AM474_RS32105 PF08240 Alcohol dehydrogenase GroES-like domain AM474_RS32105 PF16197 Ketoacyl-synthetase C-terminal extension AM474_RS32105 PF02801 Beta-ketoacyl synthase, C-terminal domain AM474_RS32105 PF00107 Zinc-binding dehydrogenase AM474_RS32105 PF14765 Polyketide synthase dehydratase AM474_RS32105 PF00698 Acyl transferase domain AM474_RS32110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS32110 PF03466 LysR substrate binding domain AM474_RS32115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS32120 PF00873 AcrB/AcrD/AcrF family AM474_RS32125 PF02321 Outer membrane efflux protein AM474_RS32130 PF05163 DinB family AM474_RS32135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS32135 PF03466 LysR substrate binding domain AM474_RS32145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM474_RS32150 PF07690 Major Facilitator Superfamily AM474_RS32175 PF03573 outer membrane porin, OprD family AM474_RS32185 PF04444 Catechol dioxygenase N terminus AM474_RS32185 PF00775 Dioxygenase AM474_RS32190 PF02426 Muconolactone delta-isomerase AM474_RS32195 PF13378 Enolase C-terminal domain-like AM474_RS32195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM474_RS32205 PF03466 LysR substrate binding domain AM474_RS32205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS32210 PF12833 Helix-turn-helix domain AM474_RS32210 PF14525 AraC-binding-like domain AM474_RS32220 PF00355 Rieske [2Fe-2S] domain AM474_RS32220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM474_RS32225 PF00866 Ring hydroxylating beta subunit AM474_RS32230 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS32230 PF00970 Oxidoreductase FAD-binding domain AM474_RS32230 PF00175 Oxidoreductase NAD-binding domain AM474_RS32235 PF00106 short chain dehydrogenase AM474_RS32240 PF00970 Oxidoreductase FAD-binding domain AM474_RS32240 PF00111 2Fe-2S iron-sulfur cluster binding domain AM474_RS32240 PF00175 Oxidoreductase NAD-binding domain AM474_RS32245 PF00866 Ring hydroxylating beta subunit AM474_RS32250 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM474_RS32250 PF00355 Rieske [2Fe-2S] domain AM474_RS32255 PF12833 Helix-turn-helix domain AM474_RS32255 PF14525 AraC-binding-like domain AM474_RS32260 PF00873 AcrB/AcrD/AcrF family AM474_RS32265 PF00529 HlyD membrane-fusion protein of T1SS AM474_RS32265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM474_RS32270 PF02321 Outer membrane efflux protein AM474_RS32275 PF00486 Transcriptional regulatory protein, C terminal AM474_RS32275 PF00072 Response regulator receiver domain AM474_RS32280 PF00672 HAMP domain AM474_RS32280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM474_RS32280 PF00512 His Kinase A (phospho-acceptor) domain AM474_RS32290 PF02321 Outer membrane efflux protein AM474_RS32295 PF00873 AcrB/AcrD/AcrF family AM474_RS32300 PF00873 AcrB/AcrD/AcrF family AM474_RS32305 PF13533 Biotin-lipoyl like AM474_RS32330 PF00155 Aminotransferase class I and II AM474_RS32335 PF08534 Redoxin AM474_RS32340 PF01235 Sodium:alanine symporter family AM474_RS32345 PF03466 LysR substrate binding domain AM474_RS32345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM474_RS32350 PF00248 Aldo/keto reductase family AM474_RS32370 PF00782 Dual specificity phosphatase, catalytic domain AM474_RS32375 PF12147 Putative methyltransferase AM474_RS32375 PF12146 Serine aminopeptidase, S33 AM474_RS32380 PF01066 CDP-alcohol phosphatidyltransferase AM474_RS32385 PF04357 TamB, inner membrane protein subunit of TAM complex