AM474_RS00065	SM00822	AM474_RS00065
AM474_RS00075	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS00105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS00105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS00140	SM00052	Putative diguanylate phosphodiesterase
AM474_RS00140	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM474_RS00140	SM00267	diguanylate cyclase
AM474_RS00165	SM00387	Histidine kinase-like ATPases
AM474_RS00170	SM00448	cheY-homologous receiver domain
AM474_RS00175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS00175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS00195	SM00344	helix_turn_helix ASNC type
AM474_RS00225	SM00945	ProQ/FINO family
AM474_RS00230	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS00230	SM00387	Histidine kinase-like ATPases
AM474_RS00230	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS00230	SM00448	cheY-homologous receiver domain
AM474_RS00250	SM00822	AM474_RS00250
AM474_RS00360	SM00822	AM474_RS00360
AM474_RS00375	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS00405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS00405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS00470	SM00822	AM474_RS00470
AM474_RS00550	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS00595	SM00829	Enoylreductase
AM474_RS00620	SM00822	AM474_RS00620
AM474_RS00640	SM00422	helix_turn_helix, mercury resistance
AM474_RS00660	SM00878	Biotin carboxylase C-terminal domain
AM474_RS00670	SM00882	Coenzyme A transferase
AM474_RS00675	SM00882	Coenzyme A transferase
AM474_RS00755	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM474_RS00755	SM00465	GIY-YIG type nucleases (URI domain)
AM474_RS00760	SM00421	helix_turn_helix, Lux Regulon
AM474_RS00760	SM00448	cheY-homologous receiver domain
AM474_RS00775	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS00785	SM00965	Secretin and TonB N terminus short domain
AM474_RS00790	SM00421	helix_turn_helix, Lux Regulon
AM474_RS00805	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS00810	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS00815	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS00830	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS00850	SM00450	Rhodanese Homology Domain
AM474_RS00905	SM00382	ATPases associated with a variety of cellular activities
AM474_RS00915	SM00843	AM474_RS00915
AM474_RS00935	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS00940	SM00382	ATPases associated with a variety of cellular activities
AM474_RS00940	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS00950	SM00357	Cold shock protein domain
AM474_RS00955	SM01329	AM474_RS00955
AM474_RS00990	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AM474_RS01050	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AM474_RS01055	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM474_RS01055	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AM474_RS01105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS01105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS01105	SM01049	AM474_RS01105
AM474_RS01115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS01115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS01125	SM00387	Histidine kinase-like ATPases
AM474_RS01130	SM00448	cheY-homologous receiver domain
AM474_RS01130	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS01175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM474_RS01175	SM00382	ATPases associated with a variety of cellular activities
AM474_RS01235	SM00382	ATPases associated with a variety of cellular activities
AM474_RS01250	SM00829	Enoylreductase
AM474_RS01285	SM00448	cheY-homologous receiver domain
AM474_RS01285	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS01290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS01290	SM00387	Histidine kinase-like ATPases
AM474_RS01290	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS01330	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS01375	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS01390	SM00382	ATPases associated with a variety of cellular activities
AM474_RS01430	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM474_RS01450	SM00422	helix_turn_helix, mercury resistance
AM474_RS01495	SM00382	ATPases associated with a variety of cellular activities
AM474_RS01495	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS01505	SM00220	Serine/Threonine protein kinases, catalytic domain
AM474_RS01560	SM00487	DEAD-like helicases superfamily
AM474_RS01595	SM00487	DEAD-like helicases superfamily
AM474_RS01595	SM00490	helicase superfamily c-terminal domain
AM474_RS01605	SM00422	helix_turn_helix, mercury resistance
AM474_RS01610	SM00411	bacterial (prokaryotic) histone like domain
AM474_RS01615	SM00873	B3/4 domain
AM474_RS01615	SM00874	tRNA synthetase B5 domain
AM474_RS01615	SM00896	Ferredoxin-fold anticodon binding domain
AM474_RS01640	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM474_RS01695	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS01755	SM00857	Resolvase, N terminal domain
AM474_RS01760	SM00422	helix_turn_helix, mercury resistance
AM474_RS01785	SM00422	helix_turn_helix, mercury resistance
AM474_RS01795	SM00857	Resolvase, N terminal domain
AM474_RS01915	SM00476	deoxyribonuclease I
AM474_RS01945	SM00318	Staphylococcal nuclease homologues
AM474_RS02150	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS02185	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS02200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS02320	SM00232	JAB/MPN domain
AM474_RS02525	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS02605	SM00331	Sigma factor PP2C-like phosphatases
AM474_RS02605	SM00448	cheY-homologous receiver domain
AM474_RS02625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS02625	SM00866	AM474_RS02625
AM474_RS02660	SM00448	cheY-homologous receiver domain
AM474_RS02660	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS02665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS02665	SM00387	Histidine kinase-like ATPases
AM474_RS02665	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS02675	SM00382	ATPases associated with a variety of cellular activities
AM474_RS02705	SM00100	Cyclic nucleotide-monophosphate binding domain
AM474_RS02815	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM474_RS02815	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM474_RS02815	SM00493	AM474_RS02815
AM474_RS02830	SM00422	helix_turn_helix, mercury resistance
AM474_RS02885	SM00422	helix_turn_helix, mercury resistance
AM474_RS02970	SM00487	DEAD-like helicases superfamily
AM474_RS03135	SM00966	SpoVT / AbrB like domain 
AM474_RS03155	SM00382	ATPases associated with a variety of cellular activities
AM474_RS03180	SM00829	Enoylreductase
AM474_RS03210	SM00487	DEAD-like helicases superfamily
AM474_RS03210	SM00490	helicase superfamily c-terminal domain
AM474_RS03250	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS03300	SM00387	Histidine kinase-like ATPases
AM474_RS03300	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS03300	SM00448	cheY-homologous receiver domain
AM474_RS03305	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS03380	SM00487	DEAD-like helicases superfamily
AM474_RS03380	SM00490	helicase superfamily c-terminal domain
AM474_RS03425	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS03435	SM00841	Elongation factor P, C-terminal
AM474_RS03435	SM01185	AM474_RS03435
AM474_RS03470	SM00382	ATPases associated with a variety of cellular activities
AM474_RS03520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS03520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS03535	SM00267	diguanylate cyclase
AM474_RS03545	SM00880	AM474_RS03545
AM474_RS03550	SM00460	Transglutaminase/protease-like homologues
AM474_RS03565	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM474_RS03590	SM00448	cheY-homologous receiver domain
AM474_RS03595	SM00387	Histidine kinase-like ATPases
AM474_RS03620	SM00822	AM474_RS03620
AM474_RS03640	SM00878	Biotin carboxylase C-terminal domain
AM474_RS03645	SM00822	AM474_RS03645
AM474_RS03670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS03680	SM00421	helix_turn_helix, Lux Regulon
AM474_RS03680	SM00448	cheY-homologous receiver domain
AM474_RS03695	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS03745	SM00382	ATPases associated with a variety of cellular activities
AM474_RS03760	SM00849	Metallo-beta-lactamase superfamily
AM474_RS03770	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS03775	SM00822	AM474_RS03775
AM474_RS03785	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS03785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS03800	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS03815	SM00382	ATPases associated with a variety of cellular activities
AM474_RS03905	SM00382	ATPases associated with a variety of cellular activities
AM474_RS03920	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM474_RS03955	SM00893	Electron transfer flavoprotein domain
AM474_RS03960	SM00893	Electron transfer flavoprotein domain
AM474_RS03980	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS04025	SM00825	Beta-ketoacyl synthase
AM474_RS04030	SM00823	Phosphopantetheine attachment site
AM474_RS04035	SM00822	AM474_RS04035
AM474_RS04040	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AM474_RS04075	SM00363	S4 RNA-binding domain
AM474_RS04085	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS04095	SM00226	Low molecular weight phosphatase family
AM474_RS04125	SM00849	Metallo-beta-lactamase superfamily
AM474_RS04140	SM00382	ATPases associated with a variety of cellular activities
AM474_RS04195	SM00900	AM474_RS04195
AM474_RS04215	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM474_RS04220	SM00487	DEAD-like helicases superfamily
AM474_RS04220	SM00490	helicase superfamily c-terminal domain
AM474_RS04220	SM00982	AM474_RS04220
AM474_RS04220	SM01058	CarD-like/TRCF domain
AM474_RS04265	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM474_RS04265	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM474_RS04265	SM00493	AM474_RS04265
AM474_RS04310	SM00382	ATPases associated with a variety of cellular activities
AM474_RS04330	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AM474_RS04350	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS04355	SM00852	Probable molybdopterin binding domain
AM474_RS04360	SM00852	Probable molybdopterin binding domain
AM474_RS04405	SM00849	Metallo-beta-lactamase superfamily
AM474_RS04435	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM474_RS04445	SM00421	helix_turn_helix, Lux Regulon
AM474_RS04445	SM00448	cheY-homologous receiver domain
AM474_RS04460	SM00981	AM474_RS04460
AM474_RS04505	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS04575	SM00327	von Willebrand factor (vWF) type A domain
AM474_RS04580	SM00028	Tetratricopeptide repeats
AM474_RS04595	SM00869	Autotransporter beta-domain
AM474_RS04600	SM00448	cheY-homologous receiver domain
AM474_RS04600	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS04605	SM00387	Histidine kinase-like ATPases
AM474_RS04605	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS04690	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS04810	SM00257	Lysin motif
AM474_RS04815	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM474_RS04820	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM474_RS04825	SM01329	AM474_RS04825
AM474_RS04945	SM00487	DEAD-like helicases superfamily
AM474_RS04945	SM00490	helicase superfamily c-terminal domain
AM474_RS04960	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM474_RS05035	SM00411	bacterial (prokaryotic) histone like domain
AM474_RS05040	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS05060	SM00830	Chorismate mutase type II
AM474_RS05070	SM00434	DNA Topoisomerase IV
AM474_RS05100	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS05115	SM00267	diguanylate cyclase
AM474_RS05130	SM00363	S4 RNA-binding domain
AM474_RS05175	SM00382	ATPases associated with a variety of cellular activities
AM474_RS05200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS05200	SM00387	Histidine kinase-like ATPases
AM474_RS05200	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS05205	SM00448	cheY-homologous receiver domain
AM474_RS05205	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS05220	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM474_RS05250	SM00481	DNA polymerase alpha chain like domain
AM474_RS05270	SM00448	cheY-homologous receiver domain
AM474_RS05270	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS05280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS05280	SM00387	Histidine kinase-like ATPases
AM474_RS05280	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS05310	SM00382	ATPases associated with a variety of cellular activities
AM474_RS05325	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS05335	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AM474_RS05350	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS05420	SM00382	ATPases associated with a variety of cellular activities
AM474_RS05440	SM00479	AM474_RS05440
AM474_RS05445	SM00100	Cyclic nucleotide-monophosphate binding domain
AM474_RS05525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS05525	SM00866	AM474_RS05525
AM474_RS05550	SM00382	ATPases associated with a variety of cellular activities
AM474_RS05560	SM00829	Enoylreductase
AM474_RS05565	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM474_RS05565	SM00245	tail specific protease
AM474_RS05570	SM00052	Putative diguanylate phosphodiesterase
AM474_RS05570	SM00267	diguanylate cyclase
AM474_RS05575	SM00671	Sel1-like repeats.
AM474_RS05585	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS05630	SM00357	Cold shock protein domain
AM474_RS05635	SM00563	Phosphate acyltransferases
AM474_RS05645	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS05655	SM00387	Histidine kinase-like ATPases
AM474_RS05655	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS05655	SM00448	cheY-homologous receiver domain
AM474_RS05660	SM00487	DEAD-like helicases superfamily
AM474_RS05660	SM00490	helicase superfamily c-terminal domain
AM474_RS05685	SM00822	AM474_RS05685
AM474_RS05745	SM00248	ankyrin repeats
AM474_RS05795	SM00098	Alkaline phosphatase homologues
AM474_RS05800	SM00382	ATPases associated with a variety of cellular activities
AM474_RS05800	SM00487	DEAD-like helicases superfamily
AM474_RS05800	SM00490	helicase superfamily c-terminal domain
AM474_RS05800	SM00847	Helicase associated domain (HA2)  Add an annotation
AM474_RS05865	SM00487	DEAD-like helicases superfamily
AM474_RS05865	SM00490	helicase superfamily c-terminal domain
AM474_RS05885	SM00052	Putative diguanylate phosphodiesterase
AM474_RS05885	SM00267	diguanylate cyclase
AM474_RS05895	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS05900	SM00382	ATPases associated with a variety of cellular activities
AM474_RS05945	SM00422	helix_turn_helix, mercury resistance
AM474_RS05970	SM00823	Phosphopantetheine attachment site
AM474_RS06045	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS06055	SM00267	diguanylate cyclase
AM474_RS06060	SM00341	Helicase and RNase D C-terminal
AM474_RS06060	SM00487	DEAD-like helicases superfamily
AM474_RS06060	SM00490	helicase superfamily c-terminal domain
AM474_RS06060	SM00956	AM474_RS06060
AM474_RS06070	SM00331	Sigma factor PP2C-like phosphatases
AM474_RS06070	SM00448	cheY-homologous receiver domain
AM474_RS06080	SM00138	Methyltransferase, chemotaxis proteins 
AM474_RS06085	SM00260	Two component signalling adaptor domain
AM474_RS06085	SM00448	cheY-homologous receiver domain
AM474_RS06090	SM00858	AM474_RS06090
AM474_RS06120	SM01230	AM474_RS06120
AM474_RS06155	SM01012	AM474_RS06155
AM474_RS06165	SM00382	ATPases associated with a variety of cellular activities
AM474_RS06165	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS06235	SM00849	Metallo-beta-lactamase superfamily
AM474_RS06240	SM00072	Guanylate kinase homologues.
AM474_RS06250	SM00382	ATPases associated with a variety of cellular activities
AM474_RS06255	SM00382	ATPases associated with a variety of cellular activities
AM474_RS06280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS06280	SM00866	AM474_RS06280
AM474_RS06295	SM00382	ATPases associated with a variety of cellular activities
AM474_RS06330	SM00900	AM474_RS06330
AM474_RS06340	SM00710	Parallel beta-helix repeats
AM474_RS06340	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
AM474_RS06345	SM00382	ATPases associated with a variety of cellular activities
AM474_RS06425	SM00382	ATPases associated with a variety of cellular activities
AM474_RS06435	SM00965	Secretin and TonB N terminus short domain
AM474_RS06480	SM00861	Transketolase, pyrimidine binding domain
AM474_RS06490	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AM474_RS06500	SM00421	helix_turn_helix, Lux Regulon
AM474_RS06515	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS06535	SM00822	AM474_RS06535
AM474_RS06550	SM01007	Class II Aldolase and Adducin N-terminal domain
AM474_RS06590	SM00905	Dihydroneopterin aldolase
AM474_RS06610	SM00382	ATPases associated with a variety of cellular activities
AM474_RS06625	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS06635	SM00382	ATPases associated with a variety of cellular activities
AM474_RS06645	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS06695	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS06715	SM00387	Histidine kinase-like ATPases
AM474_RS06715	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS06715	SM00448	cheY-homologous receiver domain
AM474_RS06735	SM00487	DEAD-like helicases superfamily
AM474_RS06735	SM00490	helicase superfamily c-terminal domain
AM474_RS06760	SM00919	Malic enzyme, NAD binding domain
AM474_RS06760	SM01274	AM474_RS06760
AM474_RS06785	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS06795	SM00421	helix_turn_helix, Lux Regulon
AM474_RS06850	SM00155	Phospholipase D. Active site motifs.
AM474_RS06880	SM00900	AM474_RS06880
AM474_RS06890	SM00478	endonuclease III
AM474_RS06890	SM00525	AM474_RS06890
AM474_RS06905	SM00998	Adenylosuccinate lyase C-terminus
AM474_RS06910	SM00998	Adenylosuccinate lyase C-terminus
AM474_RS06915	SM01236	AM474_RS06915
AM474_RS06920	SM01236	AM474_RS06920
AM474_RS06965	SM00479	AM474_RS06965
AM474_RS06995	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM474_RS07000	SM00869	Autotransporter beta-domain
AM474_RS07015	SM00382	ATPases associated with a variety of cellular activities
AM474_RS07025	SM00984	UDP binding domain
AM474_RS07040	SM00671	Sel1-like repeats.
AM474_RS07050	SM00710	Parallel beta-helix repeats
AM474_RS07050	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
AM474_RS07125	SM00984	UDP binding domain
AM474_RS07145	SM00354	helix_turn _helix lactose operon repressor
AM474_RS07170	SM00829	Enoylreductase
AM474_RS07190	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS07265	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM474_RS07265	SM01134	AM474_RS07265
AM474_RS07335	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS07350	SM00421	helix_turn_helix, Lux Regulon
AM474_RS07375	SM00421	helix_turn_helix, Lux Regulon
AM474_RS07375	SM00448	cheY-homologous receiver domain
AM474_RS07385	SM01144	AM474_RS07385
AM474_RS07390	SM00382	ATPases associated with a variety of cellular activities
AM474_RS07425	SM00849	Metallo-beta-lactamase superfamily
AM474_RS07425	SM01027	Beta-Casp domain
AM474_RS07440	SM00382	ATPases associated with a variety of cellular activities
AM474_RS07460	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AM474_RS07460	SM00534	ATPase domain of DNA mismatch repair MUTS family
AM474_RS07475	SM00257	Lysin motif
AM474_RS07505	SM00829	Enoylreductase
AM474_RS07535	SM01192	AM474_RS07535
AM474_RS07535	SM01193	AM474_RS07535
AM474_RS07550	SM00977	TilS substrate C-terminal domain
AM474_RS07560	SM00481	DNA polymerase alpha chain like domain
AM474_RS07595	SM00935	Outer membrane protein (OmpH-like)
AM474_RS07605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM474_RS07650	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM474_RS07720	SM00382	ATPases associated with a variety of cellular activities
AM474_RS07725	SM00563	Phosphate acyltransferases
AM474_RS07805	SM00422	helix_turn_helix, mercury resistance
AM474_RS07825	SM00506	Appr-1"-p processing enzyme
AM474_RS07845	SM01154	AM474_RS07845
AM474_RS07870	SM00267	diguanylate cyclase
AM474_RS07870	SM00448	cheY-homologous receiver domain
AM474_RS07875	SM00448	cheY-homologous receiver domain
AM474_RS07880	SM00073	Histidine Phosphotransfer domain
AM474_RS07880	SM00260	Two component signalling adaptor domain
AM474_RS07880	SM00387	Histidine kinase-like ATPases
AM474_RS07880	SM00448	cheY-homologous receiver domain
AM474_RS07885	SM00260	Two component signalling adaptor domain
AM474_RS07890	SM00138	Methyltransferase, chemotaxis proteins 
AM474_RS07895	SM00260	Two component signalling adaptor domain
AM474_RS07900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS07900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS07930	SM00421	helix_turn_helix, Lux Regulon
AM474_RS07930	SM00448	cheY-homologous receiver domain
AM474_RS07990	SM01322	AM474_RS07990
AM474_RS08095	SM00382	ATPases associated with a variety of cellular activities
AM474_RS08095	SM00962	SRP54-type protein, GTPase domain
AM474_RS08095	SM00963	SRP54-type protein, helical bundle domain
AM474_RS08105	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS08105	SM01091	Transporter associated domain
AM474_RS08155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS08155	SM00866	AM474_RS08155
AM474_RS08190	SM01211	AM474_RS08190
AM474_RS08195	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS08260	SM00382	ATPases associated with a variety of cellular activities
AM474_RS08325	SM00422	helix_turn_helix, mercury resistance
AM474_RS08335	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM474_RS08355	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM474_RS08375	SM00422	helix_turn_helix, mercury resistance
AM474_RS08455	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS08475	SM00470	ParB-like nuclease domain
AM474_RS08545	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS08545	SM01240	AM474_RS08545
AM474_RS08550	SM00421	helix_turn_helix, Lux Regulon
AM474_RS08610	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS08660	SM00917	LeuA allosteric (dimerisation) domain
AM474_RS08700	SM00564	beta-propeller repeat
AM474_RS08720	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS08725	SM00028	Tetratricopeptide repeats
AM474_RS08735	SM00562	AM474_RS08735
AM474_RS08755	SM00271	DnaJ molecular chaperone homology domain
AM474_RS08810	SM01323	AM474_RS08810
AM474_RS08830	SM00052	Putative diguanylate phosphodiesterase
AM474_RS08855	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS08895	SM00382	ATPases associated with a variety of cellular activities
AM474_RS08930	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM474_RS08935	SM00829	Enoylreductase
AM474_RS09010	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS09030	SM00487	DEAD-like helicases superfamily
AM474_RS09030	SM00490	helicase superfamily c-terminal domain
AM474_RS09050	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS09065	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS09090	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM474_RS09105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS09105	SM00387	Histidine kinase-like ATPases
AM474_RS09110	SM00421	helix_turn_helix, Lux Regulon
AM474_RS09110	SM00448	cheY-homologous receiver domain
AM474_RS09180	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS09180	SM00382	ATPases associated with a variety of cellular activities
AM474_RS09220	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS09235	SM00965	Secretin and TonB N terminus short domain
AM474_RS09300	SM00852	Probable molybdopterin binding domain
AM474_RS09305	SM00852	Probable molybdopterin binding domain
AM474_RS09325	SM00226	Low molecular weight phosphatase family
AM474_RS09335	SM00880	AM474_RS09335
AM474_RS09340	SM00670	Large family of predicted nucleotide-binding domains
AM474_RS09355	SM00421	helix_turn_helix, Lux Regulon
AM474_RS09390	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS09415	SM00382	ATPases associated with a variety of cellular activities
AM474_RS09440	SM00382	ATPases associated with a variety of cellular activities
AM474_RS09445	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS09455	SM00411	bacterial (prokaryotic) histone like domain
AM474_RS09485	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS09485	SM00091	PAS domain
AM474_RS09485	SM00387	Histidine kinase-like ATPases
AM474_RS09485	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS09485	SM00448	cheY-homologous receiver domain
AM474_RS09490	SM00052	Putative diguanylate phosphodiesterase
AM474_RS09490	SM00448	cheY-homologous receiver domain
AM474_RS09495	SM00421	helix_turn_helix, Lux Regulon
AM474_RS09495	SM00448	cheY-homologous receiver domain
AM474_RS09510	SM00487	DEAD-like helicases superfamily
AM474_RS09510	SM00490	helicase superfamily c-terminal domain
AM474_RS09545	SM00822	AM474_RS09545
AM474_RS09565	SM00100	Cyclic nucleotide-monophosphate binding domain
AM474_RS09590	SM00382	ATPases associated with a variety of cellular activities
AM474_RS09650	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS09675	SM00487	DEAD-like helicases superfamily
AM474_RS09675	SM00490	helicase superfamily c-terminal domain
AM474_RS09675	SM00847	Helicase associated domain (HA2)  Add an annotation
AM474_RS09695	SM00344	helix_turn_helix ASNC type
AM474_RS09745	SM00387	Histidine kinase-like ATPases
AM474_RS09745	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS09745	SM00448	cheY-homologous receiver domain
AM474_RS09765	SM00671	Sel1-like repeats.
AM474_RS09775	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS09790	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS09790	SM01091	Transporter associated domain
AM474_RS09850	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS09865	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM474_RS09925	SM00014	Acid phosphatase homologues
AM474_RS09930	SM00464	Found in ATP-dependent protease La (LON)
AM474_RS09950	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
AM474_RS09975	SM00382	ATPases associated with a variety of cellular activities
AM474_RS10030	SM00448	cheY-homologous receiver domain
AM474_RS10030	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS10050	SM00091	PAS domain
AM474_RS10050	SM00387	Histidine kinase-like ATPases
AM474_RS10050	SM01080	AM474_RS10050
AM474_RS10055	SM00382	ATPases associated with a variety of cellular activities
AM474_RS10075	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM474_RS10090	SM00861	Transketolase, pyrimidine binding domain
AM474_RS10190	SM00382	ATPases associated with a variety of cellular activities
AM474_RS10225	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS10245	SM00421	helix_turn_helix, Lux Regulon
AM474_RS10260	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS10265	SM00823	Phosphopantetheine attachment site
AM474_RS10275	SM00421	helix_turn_helix, Lux Regulon
AM474_RS10275	SM00448	cheY-homologous receiver domain
AM474_RS10285	SM00912	haemagglutination activity domain
AM474_RS10320	SM00822	AM474_RS10320
AM474_RS10335	SM00903	Flavin reductase like domain
AM474_RS10340	SM00421	helix_turn_helix, Lux Regulon
AM474_RS10360	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS10375	SM00829	Enoylreductase
AM474_RS10405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM474_RS10430	SM00073	Histidine Phosphotransfer domain
AM474_RS10430	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS10430	SM00091	PAS domain
AM474_RS10430	SM00387	Histidine kinase-like ATPases
AM474_RS10430	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS10430	SM00448	cheY-homologous receiver domain
AM474_RS10430	SM01079	AM474_RS10430
AM474_RS10455	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM474_RS10455	SM00387	Histidine kinase-like ATPases
AM474_RS10455	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS10470	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS10530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS10545	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS10590	SM00382	ATPases associated with a variety of cellular activities
AM474_RS10610	SM00382	ATPases associated with a variety of cellular activities
AM474_RS10615	SM00822	AM474_RS10615
AM474_RS10630	SM00861	Transketolase, pyrimidine binding domain
AM474_RS10640	SM00829	Enoylreductase
AM474_RS10645	SM00287	Bacterial SH3 domain homologues
AM474_RS10660	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS10665	SM00382	ATPases associated with a variety of cellular activities
AM474_RS10695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS10710	SM00965	Secretin and TonB N terminus short domain
AM474_RS10780	SM00873	B3/4 domain
AM474_RS10795	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS10800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS10800	SM00895	AM474_RS10800
AM474_RS10815	SM01130	AM474_RS10815
AM474_RS10830	SM00421	helix_turn_helix, Lux Regulon
AM474_RS10830	SM00448	cheY-homologous receiver domain
AM474_RS10835	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS10835	SM00091	PAS domain
AM474_RS10835	SM00387	Histidine kinase-like ATPases
AM474_RS10835	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS10850	SM00849	Metallo-beta-lactamase superfamily
AM474_RS10965	SM00382	ATPases associated with a variety of cellular activities
AM474_RS10970	SM00382	ATPases associated with a variety of cellular activities
AM474_RS10985	SM00823	Phosphopantetheine attachment site
AM474_RS10990	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS11005	SM00830	Chorismate mutase type II
AM474_RS11035	SM01060	AM474_RS11035
AM474_RS11045	SM00662	RNA polymerases D
AM474_RS11050	SM00363	S4 RNA-binding domain
AM474_RS11050	SM01390	AM474_RS11050
AM474_RS11115	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM474_RS11120	SM01374	AM474_RS11120
AM474_RS11140	SM00322	K homology RNA-binding domain
AM474_RS11155	SM01382	AM474_RS11155
AM474_RS11155	SM01383	AM474_RS11155
AM474_RS11175	SM01403	AM474_RS11175
AM474_RS11185	SM00838	Elongation factor G C-terminus
AM474_RS11185	SM00889	Elongation factor G, domain IV
AM474_RS11200	SM00663	RNA polymerase I subunit A N-terminus
AM474_RS11225	SM00649	Ribosomal protein L11/L12
AM474_RS11230	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM474_RS11230	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM474_RS11335	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM474_RS11355	SM00822	AM474_RS11355
AM474_RS11360	SM00382	ATPases associated with a variety of cellular activities
AM474_RS11385	SM00100	Cyclic nucleotide-monophosphate binding domain
AM474_RS11385	SM00419	helix_turn_helix, cAMP Regulatory protein
AM474_RS11430	SM00232	JAB/MPN domain
AM474_RS11570	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS11610	SM00382	ATPases associated with a variety of cellular activities
AM474_RS11620	SM00421	helix_turn_helix, Lux Regulon
AM474_RS11620	SM00448	cheY-homologous receiver domain
AM474_RS11625	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS11625	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS11625	SM00091	PAS domain
AM474_RS11625	SM00387	Histidine kinase-like ATPases
AM474_RS11635	SM00271	DnaJ molecular chaperone homology domain
AM474_RS11665	SM00650	Ribosomal RNA adenine dimethylases
AM474_RS11680	SM00450	Rhodanese Homology Domain
AM474_RS11685	SM00763	PrkA AAA domain
AM474_RS11715	SM00905	Dihydroneopterin aldolase
AM474_RS11720	SM01207	AM474_RS11720
AM474_RS11740	SM00400	zinc finger
AM474_RS11740	SM00493	AM474_RS11740
AM474_RS11740	SM00766	DNA primase DnaG DnaB-binding
AM474_RS11750	SM00052	Putative diguanylate phosphodiesterase
AM474_RS11750	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS11750	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS11750	SM00091	PAS domain
AM474_RS11750	SM00267	diguanylate cyclase
AM474_RS11765	SM00382	ATPases associated with a variety of cellular activities
AM474_RS11825	SM01276	AM474_RS11825
AM474_RS11865	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS11925	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM474_RS11940	SM00861	Transketolase, pyrimidine binding domain
AM474_RS11945	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM474_RS12005	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS12020	SM00091	PAS domain
AM474_RS12020	SM00421	helix_turn_helix, Lux Regulon
AM474_RS12055	SM00100	Cyclic nucleotide-monophosphate binding domain
AM474_RS12055	SM00419	helix_turn_helix, cAMP Regulatory protein
AM474_RS12065	SM00327	von Willebrand factor (vWF) type A domain
AM474_RS12115	SM00344	helix_turn_helix ASNC type
AM474_RS12135	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS12195	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS12195	SM00876	Biotin and Thiamin Synthesis associated domain
AM474_RS12205	SM00797	Allophanate hydrolase subunit 2
AM474_RS12210	SM00796	Allophanate hydrolase subunit 1
AM474_RS12215	SM00878	Biotin carboxylase C-terminal domain
AM474_RS12335	SM00965	Secretin and TonB N terminus short domain
AM474_RS12370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS12370	SM00387	Histidine kinase-like ATPases
AM474_RS12370	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS12375	SM00448	cheY-homologous receiver domain
AM474_RS12375	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS12385	SM00563	Phosphate acyltransferases
AM474_RS12395	SM00382	ATPases associated with a variety of cellular activities
AM474_RS12395	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS12415	SM00357	Cold shock protein domain
AM474_RS12420	SM00487	DEAD-like helicases superfamily
AM474_RS12420	SM00490	helicase superfamily c-terminal domain
AM474_RS12430	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS12435	SM00244	prohibitin homologues
AM474_RS12540	SM00996	S-adenosyl-L-homocysteine hydrolase
AM474_RS12540	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AM474_RS12560	SM00487	DEAD-like helicases superfamily
AM474_RS12560	SM00490	helicase superfamily c-terminal domain
AM474_RS12580	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS12585	SM00867	YceI-like domain 
AM474_RS12625	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS12630	SM00260	Two component signalling adaptor domain
AM474_RS12640	SM00073	Histidine Phosphotransfer domain
AM474_RS12640	SM00260	Two component signalling adaptor domain
AM474_RS12640	SM00387	Histidine kinase-like ATPases
AM474_RS12640	SM00448	cheY-homologous receiver domain
AM474_RS12640	SM01231	AM474_RS12640
AM474_RS12645	SM00138	Methyltransferase, chemotaxis proteins 
AM474_RS12650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS12655	SM00260	Two component signalling adaptor domain
AM474_RS12660	SM00448	cheY-homologous receiver domain
AM474_RS12665	SM00448	cheY-homologous receiver domain
AM474_RS12685	SM00732	Likely ribonuclease with RNase H fold.
AM474_RS12710	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS12725	SM00382	ATPases associated with a variety of cellular activities
AM474_RS12730	SM00382	ATPases associated with a variety of cellular activities
AM474_RS12750	SM01152	AM474_RS12750
AM474_RS12780	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS12840	SM00382	ATPases associated with a variety of cellular activities
AM474_RS12845	SM00382	ATPases associated with a variety of cellular activities
AM474_RS12845	SM00962	SRP54-type protein, GTPase domain
AM474_RS12845	SM00963	SRP54-type protein, helical bundle domain
AM474_RS12900	SM00764	Citrate lyase ligase C-terminal domain
AM474_RS12920	SM00671	Sel1-like repeats.
AM474_RS12930	SM00563	Phosphate acyltransferases
AM474_RS12935	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM474_RS12935	SM01232	AM474_RS12935
AM474_RS13030	SM00091	PAS domain
AM474_RS13030	SM00267	diguanylate cyclase
AM474_RS13035	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM474_RS13090	SM00869	Autotransporter beta-domain
AM474_RS13105	SM00382	ATPases associated with a variety of cellular activities
AM474_RS13165	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS13185	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM474_RS13210	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS13235	SM00382	ATPases associated with a variety of cellular activities
AM474_RS13255	SM01230	AM474_RS13255
AM474_RS13265	SM01230	AM474_RS13265
AM474_RS13295	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS13295	SM00091	PAS domain
AM474_RS13295	SM00267	diguanylate cyclase
AM474_RS13325	SM00052	Putative diguanylate phosphodiesterase
AM474_RS13325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS13325	SM00091	PAS domain
AM474_RS13325	SM00267	diguanylate cyclase
AM474_RS13350	SM00382	ATPases associated with a variety of cellular activities
AM474_RS13355	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM474_RS13375	SM00100	Cyclic nucleotide-monophosphate binding domain
AM474_RS13375	SM00419	helix_turn_helix, cAMP Regulatory protein
AM474_RS13410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS13415	SM00448	cheY-homologous receiver domain
AM474_RS13520	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS13535	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS13545	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS13605	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS13635	SM00998	Adenylosuccinate lyase C-terminus
AM474_RS13650	SM00882	Coenzyme A transferase
AM474_RS13655	SM00882	Coenzyme A transferase
AM474_RS13660	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS13665	SM01007	Class II Aldolase and Adducin N-terminal domain
AM474_RS13670	SM01130	AM474_RS13670
AM474_RS13720	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AM474_RS13790	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AM474_RS13790	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AM474_RS13820	SM00014	Acid phosphatase homologues
AM474_RS13850	SM00382	ATPases associated with a variety of cellular activities
AM474_RS13860	SM00822	AM474_RS13860
AM474_RS13870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS13875	SM00448	cheY-homologous receiver domain
AM474_RS13880	SM00073	Histidine Phosphotransfer domain
AM474_RS13880	SM00260	Two component signalling adaptor domain
AM474_RS13880	SM00387	Histidine kinase-like ATPases
AM474_RS13880	SM01231	AM474_RS13880
AM474_RS13885	SM00260	Two component signalling adaptor domain
AM474_RS13890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS13895	SM00138	Methyltransferase, chemotaxis proteins 
AM474_RS13905	SM00448	cheY-homologous receiver domain
AM474_RS13910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS13910	SM00331	Sigma factor PP2C-like phosphatases
AM474_RS13925	SM00267	diguanylate cyclase
AM474_RS13955	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS13995	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS14020	SM00965	Secretin and TonB N terminus short domain
AM474_RS14105	SM00382	ATPases associated with a variety of cellular activities
AM474_RS14150	SM00769	Water Stress and Hypersensitive response
AM474_RS14180	SM00895	AM474_RS14180
AM474_RS14185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS14185	SM00895	AM474_RS14185
AM474_RS14280	SM00947	Carbonic anhydrase
AM474_RS14345	SM00382	ATPases associated with a variety of cellular activities
AM474_RS14345	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS14390	SM00240	Forkhead associated domain
AM474_RS14420	SM00331	Sigma factor PP2C-like phosphatases
AM474_RS14420	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AM474_RS14425	SM00220	Serine/Threonine protein kinases, catalytic domain
AM474_RS14425	SM00327	von Willebrand factor (vWF) type A domain
AM474_RS14430	SM00382	ATPases associated with a variety of cellular activities
AM474_RS14450	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS14510	SM00849	Metallo-beta-lactamase superfamily
AM474_RS14560	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS14620	SM01321	AM474_RS14620
AM474_RS14650	SM00912	haemagglutination activity domain
AM474_RS14685	SM00421	helix_turn_helix, Lux Regulon
AM474_RS14685	SM00448	cheY-homologous receiver domain
AM474_RS14745	SM00829	Enoylreductase
AM474_RS14760	SM00257	Lysin motif
AM474_RS14785	SM00028	Tetratricopeptide repeats
AM474_RS14820	SM00836	DALR anticodon binding domain
AM474_RS14835	SM00563	Phosphate acyltransferases
AM474_RS14855	SM00487	DEAD-like helicases superfamily
AM474_RS14855	SM00490	helicase superfamily c-terminal domain
AM474_RS14860	SM00387	Histidine kinase-like ATPases
AM474_RS14860	SM00433	TopoisomeraseII
AM474_RS14870	SM00480	DNA polymerase III beta subunit
AM474_RS14875	SM00382	ATPases associated with a variety of cellular activities
AM474_RS14875	SM00760	Bacterial dnaA protein helix-turn-helix domain
AM474_RS14915	SM01228	AM474_RS14915
AM474_RS14930	SM00470	ParB-like nuclease domain
AM474_RS14970	SM00382	ATPases associated with a variety of cellular activities
AM474_RS14990	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM474_RS14990	SM01134	AM474_RS14990
AM474_RS15050	SM00646	AM474_RS15050
AM474_RS15065	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM474_RS15080	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM474_RS15105	SM00978	AM474_RS15105
AM474_RS15110	SM00860	SMI1 / KNR4 family
AM474_RS15120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS15120	SM00895	AM474_RS15120
AM474_RS15125	SM00822	AM474_RS15125
AM474_RS15135	SM01230	AM474_RS15135
AM474_RS15140	SM00822	AM474_RS15140
AM474_RS15185	SM00387	Histidine kinase-like ATPases
AM474_RS15185	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS15190	SM00382	ATPases associated with a variety of cellular activities
AM474_RS15190	SM00448	cheY-homologous receiver domain
AM474_RS15205	SM01230	AM474_RS15205
AM474_RS15230	SM00382	ATPases associated with a variety of cellular activities
AM474_RS15230	SM00930	AM474_RS15230
AM474_RS15245	SM00382	ATPases associated with a variety of cellular activities
AM474_RS15280	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AM474_RS15280	SM00474	3'-5' exonuclease
AM474_RS15280	SM00475	5'-3' exonuclease
AM474_RS15280	SM00482	DNA polymerase A domain
AM474_RS15310	SM00267	diguanylate cyclase
AM474_RS15320	SM00644	AM474_RS15320
AM474_RS15325	SM00091	PAS domain
AM474_RS15325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS15325	SM00387	Histidine kinase-like ATPases
AM474_RS15325	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS15330	SM00382	ATPases associated with a variety of cellular activities
AM474_RS15330	SM00448	cheY-homologous receiver domain
AM474_RS15505	SM00382	ATPases associated with a variety of cellular activities
AM474_RS15545	SM00052	Putative diguanylate phosphodiesterase
AM474_RS15545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS15545	SM00091	PAS domain
AM474_RS15545	SM00267	diguanylate cyclase
AM474_RS15585	SM00878	Biotin carboxylase C-terminal domain
AM474_RS15610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS15635	SM00829	Enoylreductase
AM474_RS15645	SM01001	AIR carboxylase
AM474_RS15760	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS15770	SM00893	Electron transfer flavoprotein domain
AM474_RS15775	SM00893	Electron transfer flavoprotein domain
AM474_RS15790	SM00989	AM474_RS15790
AM474_RS15805	SM00155	Phospholipase D. Active site motifs.
AM474_RS15830	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS15875	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS15895	SM00382	ATPases associated with a variety of cellular activities
AM474_RS15975	SM00382	ATPases associated with a variety of cellular activities
AM474_RS15985	SM00448	cheY-homologous receiver domain
AM474_RS15995	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS15995	SM01091	Transporter associated domain
AM474_RS16000	SM00091	PAS domain
AM474_RS16000	SM00387	Histidine kinase-like ATPases
AM474_RS16000	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS16005	SM00448	cheY-homologous receiver domain
AM474_RS16005	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS16025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS16025	SM00895	AM474_RS16025
AM474_RS16070	SM00411	bacterial (prokaryotic) histone like domain
AM474_RS16085	SM00487	DEAD-like helicases superfamily
AM474_RS16085	SM00490	helicase superfamily c-terminal domain
AM474_RS16100	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS16120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM474_RS16120	SM00954	Region found in RelA / SpoT proteins
AM474_RS16125	SM01409	AM474_RS16125
AM474_RS16130	SM00072	Guanylate kinase homologues.
AM474_RS16190	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS16260	SM00155	Phospholipase D. Active site motifs.
AM474_RS16270	SM00344	helix_turn_helix ASNC type
AM474_RS16300	SM01005	Alanine racemase, C-terminal domain
AM474_RS16305	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS16335	SM00052	Putative diguanylate phosphodiesterase
AM474_RS16335	SM00267	diguanylate cyclase
AM474_RS16360	SM00382	ATPases associated with a variety of cellular activities
AM474_RS16370	SM00938	Nitrogen regulatory protein P-II
AM474_RS16400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS16440	SM01219	AM474_RS16440
AM474_RS16515	SM00448	cheY-homologous receiver domain
AM474_RS16515	SM00850	LytTr DNA-binding domain
AM474_RS16565	SM00382	ATPases associated with a variety of cellular activities
AM474_RS16610	SM01004	Delta-aminolevulinic acid dehydratase
AM474_RS16630	SM00357	Cold shock protein domain
AM474_RS16630	SM00382	ATPases associated with a variety of cellular activities
AM474_RS16630	SM00959	Rho termination factor, N-terminal domain
AM474_RS16655	SM00829	Enoylreductase
AM474_RS16670	SM00382	ATPases associated with a variety of cellular activities
AM474_RS16710	SM01011	Aminopeptidase P, N-terminal domain
AM474_RS16780	SM00382	ATPases associated with a variety of cellular activities
AM474_RS16785	SM01118	AM474_RS16785
AM474_RS16825	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS16825	SM00732	Likely ribonuclease with RNase H fold.
AM474_RS16830	SM00448	cheY-homologous receiver domain
AM474_RS16830	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS16835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS16835	SM00387	Histidine kinase-like ATPases
AM474_RS16835	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS16855	SM00363	S4 RNA-binding domain
AM474_RS16915	SM00830	Chorismate mutase type II
AM474_RS16950	SM00257	Lysin motif
AM474_RS16970	SM00825	Beta-ketoacyl synthase
AM474_RS17010	SM00382	ATPases associated with a variety of cellular activities
AM474_RS17010	SM00448	cheY-homologous receiver domain
AM474_RS17015	SM00387	Histidine kinase-like ATPases
AM474_RS17015	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS17060	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS17080	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS17085	SM00382	ATPases associated with a variety of cellular activities
AM474_RS17115	SM00478	endonuclease III
AM474_RS17175	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS17190	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM474_RS17190	SM00245	tail specific protease
AM474_RS17210	SM00450	Rhodanese Homology Domain
AM474_RS17240	SM00382	ATPases associated with a variety of cellular activities
AM474_RS17240	SM00448	cheY-homologous receiver domain
AM474_RS17245	SM00091	PAS domain
AM474_RS17245	SM00387	Histidine kinase-like ATPases
AM474_RS17245	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS17270	SM01230	AM474_RS17270
AM474_RS17280	SM00981	AM474_RS17280
AM474_RS17290	SM00422	helix_turn_helix, mercury resistance
AM474_RS17310	SM00869	Autotransporter beta-domain
AM474_RS17345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS17345	SM00866	AM474_RS17345
AM474_RS17400	SM00382	ATPases associated with a variety of cellular activities
AM474_RS17425	SM00155	Phospholipase D. Active site motifs.
AM474_RS17430	SM00671	Sel1-like repeats.
AM474_RS17435	SM00671	Sel1-like repeats.
AM474_RS17440	SM00671	Sel1-like repeats.
AM474_RS17460	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS17490	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS17490	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM474_RS17500	SM00382	ATPases associated with a variety of cellular activities
AM474_RS17510	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS17510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS17510	SM01358	AM474_RS17510
AM474_RS17610	SM00382	ATPases associated with a variety of cellular activities
AM474_RS17610	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS17625	SM00836	DALR anticodon binding domain
AM474_RS17625	SM01016	Arginyl tRNA synthetase N terminal dom
AM474_RS17630	SM00487	DEAD-like helicases superfamily
AM474_RS17630	SM00490	helicase superfamily c-terminal domain
AM474_RS17640	SM00318	Staphylococcal nuclease homologues
AM474_RS17650	SM00919	Malic enzyme, NAD binding domain
AM474_RS17650	SM01274	AM474_RS17650
AM474_RS17660	SM00842	Cell division protein FtsA
AM474_RS17860	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS17995	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS18050	SM01091	Transporter associated domain
AM474_RS18075	SM00052	Putative diguanylate phosphodiesterase
AM474_RS18075	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM474_RS18075	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS18075	SM00091	PAS domain
AM474_RS18075	SM00267	diguanylate cyclase
AM474_RS18185	SM00382	ATPases associated with a variety of cellular activities
AM474_RS18235	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS18255	SM00448	cheY-homologous receiver domain
AM474_RS18255	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS18260	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS18265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS18265	SM00387	Histidine kinase-like ATPases
AM474_RS18265	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS18265	SM00448	cheY-homologous receiver domain
AM474_RS18285	SM00881	CoA binding domain
AM474_RS18340	SM00387	Histidine kinase-like ATPases
AM474_RS18340	SM00433	TopoisomeraseII
AM474_RS18355	SM00434	DNA Topoisomerase IV
AM474_RS18380	SM00052	Putative diguanylate phosphodiesterase
AM474_RS18380	SM00267	diguanylate cyclase
AM474_RS18400	SM00450	Rhodanese Homology Domain
AM474_RS18425	SM00479	AM474_RS18425
AM474_RS18445	SM00257	Lysin motif
AM474_RS18445	SM00646	AM474_RS18445
AM474_RS18450	SM00853	MutL C terminal dimerisation domain
AM474_RS18450	SM01340	AM474_RS18450
AM474_RS18470	SM00244	prohibitin homologues
AM474_RS18475	SM00244	prohibitin homologues
AM474_RS18490	SM00788	Adenylosuccinate synthetase
AM474_RS18505	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS18505	SM00357	Cold shock protein domain
AM474_RS18505	SM00955	AM474_RS18505
AM474_RS18510	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM474_RS18540	SM01005	Alanine racemase, C-terminal domain
AM474_RS18550	SM00267	diguanylate cyclase
AM474_RS18560	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS18570	SM00460	Transglutaminase/protease-like homologues
AM474_RS18580	SM00257	Lysin motif
AM474_RS18625	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS18625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS18650	SM00382	ATPases associated with a variety of cellular activities
AM474_RS18655	SM00382	ATPases associated with a variety of cellular activities
AM474_RS18665	SM00822	AM474_RS18665
AM474_RS18670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS18670	SM00895	AM474_RS18670
AM474_RS18715	SM00965	Secretin and TonB N terminus short domain
AM474_RS18735	SM00382	ATPases associated with a variety of cellular activities
AM474_RS18745	SM00988	UreE urease accessory protein, N-terminal domain
AM474_RS18770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS18770	SM00387	Histidine kinase-like ATPases
AM474_RS18770	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS18775	SM00448	cheY-homologous receiver domain
AM474_RS18775	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS18810	SM00422	helix_turn_helix, mercury resistance
AM474_RS18810	SM00871	Bacterial transcription activator, effector binding domain
AM474_RS18860	SM00507	HNH nucleases
AM474_RS18900	SM00382	ATPases associated with a variety of cellular activities
AM474_RS18930	SM00387	Histidine kinase-like ATPases
AM474_RS18930	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS18930	SM00448	cheY-homologous receiver domain
AM474_RS18935	SM01209	AM474_RS18935
AM474_RS18935	SM01210	AM474_RS18935
AM474_RS18940	SM00798	AICARFT/IMPCHase bienzyme
AM474_RS18940	SM00851	MGS-like domain
AM474_RS18970	SM00878	Biotin carboxylase C-terminal domain
AM474_RS18970	SM01209	AM474_RS18970
AM474_RS18990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS18995	SM00267	diguanylate cyclase
AM474_RS18995	SM00448	cheY-homologous receiver domain
AM474_RS19055	SM00822	AM474_RS19055
AM474_RS19090	SM00831	Cation transporter/ATPase, N-terminus
AM474_RS19160	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM474_RS19195	SM00421	helix_turn_helix, Lux Regulon
AM474_RS19290	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS19295	SM00822	AM474_RS19295
AM474_RS19305	SM00344	helix_turn_helix ASNC type
AM474_RS19320	SM00448	cheY-homologous receiver domain
AM474_RS19320	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM474_RS19325	SM00090	RIO-like kinase
AM474_RS19340	SM00422	helix_turn_helix, mercury resistance
AM474_RS19345	SM00387	Histidine kinase-like ATPases
AM474_RS19345	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS19350	SM00448	cheY-homologous receiver domain
AM474_RS19350	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS19385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS19385	SM00895	AM474_RS19385
AM474_RS19435	SM00271	DnaJ molecular chaperone homology domain
AM474_RS19445	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AM474_RS19455	SM00851	MGS-like domain
AM474_RS19455	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AM474_RS19470	SM01103	AM474_RS19470
AM474_RS19480	SM00382	ATPases associated with a variety of cellular activities
AM474_RS19520	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS19540	SM01387	AM474_RS19540
AM474_RS19550	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS19550	SM00322	K homology RNA-binding domain
AM474_RS19555	SM00749	bacterial OsmY and nodulation domain
AM474_RS19625	SM00382	ATPases associated with a variety of cellular activities
AM474_RS19625	SM00448	cheY-homologous receiver domain
AM474_RS19630	SM00091	PAS domain
AM474_RS19630	SM00387	Histidine kinase-like ATPases
AM474_RS19630	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS19730	SM00382	ATPases associated with a variety of cellular activities
AM474_RS19740	SM00100	Cyclic nucleotide-monophosphate binding domain
AM474_RS19910	SM00947	Carbonic anhydrase
AM474_RS19930	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS19955	SM01400	AM474_RS19955
AM474_RS19975	SM00028	Tetratricopeptide repeats
AM474_RS19985	SM00937	AM474_RS19985
AM474_RS20015	SM00422	helix_turn_helix, mercury resistance
AM474_RS20045	SM00972	Spore Coat Protein U domain
AM474_RS20060	SM00972	Spore Coat Protein U domain
AM474_RS20065	SM00972	Spore Coat Protein U domain
AM474_RS20070	SM00972	Spore Coat Protein U domain
AM474_RS20155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS20155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS20270	SM01060	AM474_RS20270
AM474_RS20275	SM00248	ankyrin repeats
AM474_RS20290	SM00382	ATPases associated with a variety of cellular activities
AM474_RS20315	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM474_RS20330	SM00052	Putative diguanylate phosphodiesterase
AM474_RS20330	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS20330	SM00091	PAS domain
AM474_RS20330	SM00267	diguanylate cyclase
AM474_RS20365	SM00382	ATPases associated with a variety of cellular activities
AM474_RS20370	SM00382	ATPases associated with a variety of cellular activities
AM474_RS20400	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AM474_RS20430	SM00244	prohibitin homologues
AM474_RS20440	SM00382	ATPases associated with a variety of cellular activities
AM474_RS20520	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AM474_RS20540	SM00904	Riboflavin kinase
AM474_RS20610	SM00382	ATPases associated with a variety of cellular activities
AM474_RS20610	SM00448	cheY-homologous receiver domain
AM474_RS20615	SM00091	PAS domain
AM474_RS20615	SM00387	Histidine kinase-like ATPases
AM474_RS20615	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS20640	SM00382	ATPases associated with a variety of cellular activities
AM474_RS20640	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS20660	SM00912	haemagglutination activity domain
AM474_RS20770	SM00644	AM474_RS20770
AM474_RS20780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS20780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS20800	SM00671	Sel1-like repeats.
AM474_RS20805	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM474_RS20830	SM00796	Allophanate hydrolase subunit 1
AM474_RS20835	SM00797	Allophanate hydrolase subunit 2
AM474_RS20840	SM00344	helix_turn_helix ASNC type
AM474_RS20850	SM00382	ATPases associated with a variety of cellular activities
AM474_RS20855	SM00382	ATPases associated with a variety of cellular activities
AM474_RS20890	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS20915	SM00387	Histidine kinase-like ATPases
AM474_RS20915	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS20920	SM00448	cheY-homologous receiver domain
AM474_RS20940	SM01359	AM474_RS20940
AM474_RS20940	SM01360	AM474_RS20940
AM474_RS20965	SM00845	GatB domain
AM474_RS21000	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS21080	SM00382	ATPases associated with a variety of cellular activities
AM474_RS21100	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS21105	SM00382	ATPases associated with a variety of cellular activities
AM474_RS21155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM474_RS21205	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS21255	SM00749	bacterial OsmY and nodulation domain
AM474_RS21350	SM00842	Cell division protein FtsA
AM474_RS21355	SM00864	Tubulin/FtsZ family, GTPase domain
AM474_RS21355	SM00865	Tubulin/FtsZ family, C-terminal domain
AM474_RS21380	SM00957	SecA DEAD-like domain
AM474_RS21380	SM00958	SecA preprotein cross-linking domain
AM474_RS21405	SM00091	PAS domain
AM474_RS21405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS21405	SM00387	Histidine kinase-like ATPases
AM474_RS21405	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS21415	SM00267	diguanylate cyclase
AM474_RS21415	SM00448	cheY-homologous receiver domain
AM474_RS21450	SM00822	AM474_RS21450
AM474_RS21465	SM00883	Chaperonin 10 Kd subunit
AM474_RS21495	SM00448	cheY-homologous receiver domain
AM474_RS21495	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS21500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS21500	SM00387	Histidine kinase-like ATPases
AM474_RS21500	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS21565	SM00052	Putative diguanylate phosphodiesterase
AM474_RS21565	SM00267	diguanylate cyclase
AM474_RS21610	SM00899	AM474_RS21610
AM474_RS21635	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM474_RS21650	SM00563	Phosphate acyltransferases
AM474_RS21665	SM00849	Metallo-beta-lactamase superfamily
AM474_RS21680	SM00867	YceI-like domain 
AM474_RS21700	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS21705	SM00867	YceI-like domain 
AM474_RS21710	SM00155	Phospholipase D. Active site motifs.
AM474_RS21745	SM00267	diguanylate cyclase
AM474_RS21795	SM00382	ATPases associated with a variety of cellular activities
AM474_RS21825	SM00479	AM474_RS21825
AM474_RS21865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS21865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS21870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS21870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS21875	SM00382	ATPases associated with a variety of cellular activities
AM474_RS21880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS21880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS21890	SM00858	AM474_RS21890
AM474_RS21935	SM00421	helix_turn_helix, Lux Regulon
AM474_RS21935	SM00448	cheY-homologous receiver domain
AM474_RS21950	SM00091	PAS domain
AM474_RS21950	SM00387	Histidine kinase-like ATPases
AM474_RS21950	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS21965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS21975	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS22040	SM00481	DNA polymerase alpha chain like domain
AM474_RS22065	SM00965	Secretin and TonB N terminus short domain
AM474_RS22125	SM00382	ATPases associated with a variety of cellular activities
AM474_RS22140	SM00912	haemagglutination activity domain
AM474_RS22155	SM00560	LamG-like jellyroll fold domain
AM474_RS22200	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS22295	SM00363	S4 RNA-binding domain
AM474_RS22340	SM00849	Metallo-beta-lactamase superfamily
AM474_RS22380	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS22390	SM00986	Uracil DNA glycosylase superfamily
AM474_RS22390	SM00987	UreE urease accessory protein, C-terminal domain 
AM474_RS22420	SM00448	cheY-homologous receiver domain
AM474_RS22420	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS22425	SM00387	Histidine kinase-like ATPases
AM474_RS22425	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS22475	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM474_RS22495	SM00358	Double-stranded RNA binding motif
AM474_RS22495	SM00535	Ribonuclease III family
AM474_RS22540	SM00382	ATPases associated with a variety of cellular activities
AM474_RS22540	SM00464	Found in ATP-dependent protease La (LON)
AM474_RS22545	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS22610	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS22640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS22640	SM00895	AM474_RS22640
AM474_RS22650	SM00487	DEAD-like helicases superfamily
AM474_RS22650	SM00490	helicase superfamily c-terminal domain
AM474_RS22690	SM00644	AM474_RS22690
AM474_RS22770	SM00990	AM474_RS22770
AM474_RS22815	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS22820	SM00849	Metallo-beta-lactamase superfamily
AM474_RS22830	SM00563	Phosphate acyltransferases
AM474_RS22900	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS22900	SM00091	PAS domain
AM474_RS22900	SM00267	diguanylate cyclase
AM474_RS22900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS22955	SM00450	Rhodanese Homology Domain
AM474_RS22965	SM00382	ATPases associated with a variety of cellular activities
AM474_RS22970	SM00052	Putative diguanylate phosphodiesterase
AM474_RS22970	SM00091	PAS domain
AM474_RS22970	SM00267	diguanylate cyclase
AM474_RS22980	SM00829	Enoylreductase
AM474_RS22990	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS23035	SM00091	PAS domain
AM474_RS23035	SM00382	ATPases associated with a variety of cellular activities
AM474_RS23120	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS23140	SM00382	ATPases associated with a variety of cellular activities
AM474_RS23145	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS23195	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM474_RS23225	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS23260	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS23260	SM00924	MgtE intracellular N domain
AM474_RS23275	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS23350	SM00073	Histidine Phosphotransfer domain
AM474_RS23350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS23350	SM00387	Histidine kinase-like ATPases
AM474_RS23350	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS23350	SM00448	cheY-homologous receiver domain
AM474_RS23355	SM00448	cheY-homologous receiver domain
AM474_RS23355	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS23360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS23360	SM00387	Histidine kinase-like ATPases
AM474_RS23360	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS23380	SM00954	Region found in RelA / SpoT proteins
AM474_RS23425	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS23540	SM00357	Cold shock protein domain
AM474_RS23565	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM474_RS23570	SM00382	ATPases associated with a variety of cellular activities
AM474_RS23645	SM00849	Metallo-beta-lactamase superfamily
AM474_RS23660	SM01007	Class II Aldolase and Adducin N-terminal domain
AM474_RS23670	SM00822	AM474_RS23670
AM474_RS23840	SM00849	Metallo-beta-lactamase superfamily
AM474_RS23890	SM01130	AM474_RS23890
AM474_RS23900	SM00849	Metallo-beta-lactamase superfamily
AM474_RS23920	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS23935	SM00881	CoA binding domain
AM474_RS23970	SM00822	AM474_RS23970
AM474_RS24010	SM00953	AM474_RS24010
AM474_RS24035	SM00769	Water Stress and Hypersensitive response
AM474_RS24085	SM00491	AM474_RS24085
AM474_RS24220	SM00382	ATPases associated with a variety of cellular activities
AM474_RS24225	SM00382	ATPases associated with a variety of cellular activities
AM474_RS24300	SM00047	Lysozyme subfamily 2
AM474_RS24330	SM00822	AM474_RS24330
AM474_RS24390	SM00382	ATPases associated with a variety of cellular activities
AM474_RS24395	SM00091	PAS domain
AM474_RS24395	SM00387	Histidine kinase-like ATPases
AM474_RS24395	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS24400	SM00382	ATPases associated with a variety of cellular activities
AM474_RS24400	SM00448	cheY-homologous receiver domain
AM474_RS24425	SM00382	ATPases associated with a variety of cellular activities
AM474_RS24440	SM00267	diguanylate cyclase
AM474_RS24450	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS24455	SM00363	S4 RNA-binding domain
AM474_RS24485	SM00382	ATPases associated with a variety of cellular activities
AM474_RS24500	SM00316	Ribosomal protein S1-like RNA-binding domain
AM474_RS24520	SM00267	diguanylate cyclase
AM474_RS24520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS24545	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM474_RS24605	SM00421	helix_turn_helix, Lux Regulon
AM474_RS24610	SM00829	Enoylreductase
AM474_RS24635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS24635	SM00866	AM474_RS24635
AM474_RS24705	SM01040	BRO family, N-terminal domain
AM474_RS24710	SM01321	AM474_RS24710
AM474_RS24725	SM00448	cheY-homologous receiver domain
AM474_RS24725	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS24730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS24730	SM00387	Histidine kinase-like ATPases
AM474_RS24730	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS24735	SM00357	Cold shock protein domain
AM474_RS24810	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM474_RS24835	SM00448	cheY-homologous receiver domain
AM474_RS24835	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS24840	SM00387	Histidine kinase-like ATPases
AM474_RS24840	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS24845	SM00052	Putative diguanylate phosphodiesterase
AM474_RS24845	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS24845	SM00091	PAS domain
AM474_RS24845	SM00267	diguanylate cyclase
AM474_RS24850	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS24890	SM00731	SprT homologues.
AM474_RS24900	SM00271	DnaJ molecular chaperone homology domain
AM474_RS24960	SM00382	ATPases associated with a variety of cellular activities
AM474_RS25025	SM00450	Rhodanese Homology Domain
AM474_RS25090	SM00925	MltA specific insert domain
AM474_RS25145	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS25175	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS25215	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS25215	SM00091	PAS domain
AM474_RS25215	SM00387	Histidine kinase-like ATPases
AM474_RS25215	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS25215	SM00448	cheY-homologous receiver domain
AM474_RS25225	SM00490	helicase superfamily c-terminal domain
AM474_RS25250	SM01101	AM474_RS25250
AM474_RS25275	SM00382	ATPases associated with a variety of cellular activities
AM474_RS25300	SM00235	Zinc-dependent metalloprotease
AM474_RS25310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS25310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS25325	SM01130	AM474_RS25325
AM474_RS25335	SM00382	ATPases associated with a variety of cellular activities
AM474_RS25355	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS25360	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS25370	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS25410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS25410	SM00895	AM474_RS25410
AM474_RS25465	SM00855	Phosphoglycerate mutase family
AM474_RS25490	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS25525	SM00450	Rhodanese Homology Domain
AM474_RS25535	SM00341	Helicase and RNase D C-terminal
AM474_RS25535	SM00474	3'-5' exonuclease
AM474_RS25575	SM00965	Secretin and TonB N terminus short domain
AM474_RS25705	SM00477	DNA/RNA non-specific endonuclease
AM474_RS25705	SM00892	DNA/RNA non-specific endonuclease
AM474_RS25720	SM00822	AM474_RS25720
AM474_RS25725	SM01091	Transporter associated domain
AM474_RS25750	SM00382	ATPases associated with a variety of cellular activities
AM474_RS25750	SM00448	cheY-homologous receiver domain
AM474_RS25755	SM00387	Histidine kinase-like ATPases
AM474_RS25755	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS25760	SM00870	AM474_RS25760
AM474_RS25770	SM00382	ATPases associated with a variety of cellular activities
AM474_RS25785	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS25810	SM00421	helix_turn_helix, Lux Regulon
AM474_RS25870	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS25900	SM00965	Secretin and TonB N terminus short domain
AM474_RS25975	SM00825	Beta-ketoacyl synthase
AM474_RS26020	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS26035	SM00387	Histidine kinase-like ATPases
AM474_RS26035	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS26035	SM00448	cheY-homologous receiver domain
AM474_RS26040	SM00421	helix_turn_helix, Lux Regulon
AM474_RS26040	SM00448	cheY-homologous receiver domain
AM474_RS26055	SM00878	Biotin carboxylase C-terminal domain
AM474_RS26135	SM00849	Metallo-beta-lactamase superfamily
AM474_RS26175	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS26175	SM00091	PAS domain
AM474_RS26175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS26180	SM01144	AM474_RS26180
AM474_RS26190	SM00382	ATPases associated with a variety of cellular activities
AM474_RS26205	SM00831	Cation transporter/ATPase, N-terminus
AM474_RS26230	SM00857	Resolvase, N terminal domain
AM474_RS26240	SM00422	helix_turn_helix, mercury resistance
AM474_RS26265	SM00422	helix_turn_helix, mercury resistance
AM474_RS26270	SM00421	helix_turn_helix, Lux Regulon
AM474_RS26285	SM00052	Putative diguanylate phosphodiesterase
AM474_RS26285	SM00267	diguanylate cyclase
AM474_RS26285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS26305	SM00448	cheY-homologous receiver domain
AM474_RS26305	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS26310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS26310	SM00387	Histidine kinase-like ATPases
AM474_RS26310	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS26385	SM00382	ATPases associated with a variety of cellular activities
AM474_RS26385	SM00962	SRP54-type protein, GTPase domain
AM474_RS26400	SM00448	cheY-homologous receiver domain
AM474_RS26410	SM00073	Histidine Phosphotransfer domain
AM474_RS26410	SM00260	Two component signalling adaptor domain
AM474_RS26410	SM00387	Histidine kinase-like ATPases
AM474_RS26410	SM01231	AM474_RS26410
AM474_RS26415	SM00448	cheY-homologous receiver domain
AM474_RS26435	SM00260	Two component signalling adaptor domain
AM474_RS26440	SM00260	Two component signalling adaptor domain
AM474_RS26470	SM00822	AM474_RS26470
AM474_RS26490	SM00382	ATPases associated with a variety of cellular activities
AM474_RS26530	SM00028	Tetratricopeptide repeats
AM474_RS26540	SM00421	helix_turn_helix, Lux Regulon
AM474_RS26570	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM474_RS26570	SM01134	AM474_RS26570
AM474_RS26645	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS26725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS26725	SM00895	AM474_RS26725
AM474_RS26740	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM474_RS26745	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM474_RS26755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS26755	SM00895	AM474_RS26755
AM474_RS26760	SM00968	SMC proteins Flexible Hinge Domain
AM474_RS26765	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AM474_RS26770	SM00292	breast cancer carboxy-terminal domain
AM474_RS26770	SM00532	Ligase N family
AM474_RS26790	SM00382	ATPases associated with a variety of cellular activities
AM474_RS26800	SM00493	AM474_RS26800
AM474_RS26815	SM00822	AM474_RS26815
AM474_RS26850	SM00100	Cyclic nucleotide-monophosphate binding domain
AM474_RS26850	SM00419	helix_turn_helix, cAMP Regulatory protein
AM474_RS26860	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS26965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS26990	SM01230	AM474_RS26990
AM474_RS27045	SM00479	AM474_RS27045
AM474_RS27100	SM00861	Transketolase, pyrimidine binding domain
AM474_RS27120	SM00881	CoA binding domain
AM474_RS27155	SM00387	Histidine kinase-like ATPases
AM474_RS27170	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS27180	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM474_RS27190	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS27215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS27215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS27220	SM00825	Beta-ketoacyl synthase
AM474_RS27230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS27230	SM00387	Histidine kinase-like ATPases
AM474_RS27230	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS27230	SM00448	cheY-homologous receiver domain
AM474_RS27255	SM00855	Phosphoglycerate mutase family
AM474_RS27270	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS27310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS27310	SM00895	AM474_RS27310
AM474_RS27325	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS27355	SM00387	Histidine kinase-like ATPases
AM474_RS27355	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS27360	SM00448	cheY-homologous receiver domain
AM474_RS27360	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS27390	SM00450	Rhodanese Homology Domain
AM474_RS27400	SM00903	Flavin reductase like domain
AM474_RS27410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS27410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS27410	SM01358	AM474_RS27410
AM474_RS27425	SM00829	Enoylreductase
AM474_RS27450	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM474_RS27525	SM00382	ATPases associated with a variety of cellular activities
AM474_RS27525	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS27530	SM00382	ATPases associated with a variety of cellular activities
AM474_RS27565	SM00331	Sigma factor PP2C-like phosphatases
AM474_RS27565	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AM474_RS27570	SM00220	Serine/Threonine protein kinases, catalytic domain
AM474_RS27590	SM00463	Small MutS-related domain
AM474_RS27630	SM01007	Class II Aldolase and Adducin N-terminal domain
AM474_RS27650	SM00478	endonuclease III
AM474_RS27650	SM01009	AlkA N-terminal domain
AM474_RS27705	SM00382	ATPases associated with a variety of cellular activities
AM474_RS27785	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS27850	SM01217	AM474_RS27850
AM474_RS27855	SM00052	Putative diguanylate phosphodiesterase
AM474_RS27855	SM00267	diguanylate cyclase
AM474_RS27885	SM00460	Transglutaminase/protease-like homologues
AM474_RS27955	SM00506	Appr-1"-p processing enzyme
AM474_RS28025	SM00421	helix_turn_helix, Lux Regulon
AM474_RS28030	SM00421	helix_turn_helix, Lux Regulon
AM474_RS28135	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM474_RS28150	SM00220	Serine/Threonine protein kinases, catalytic domain
AM474_RS28150	SM00331	Sigma factor PP2C-like phosphatases
AM474_RS28150	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AM474_RS28165	SM00448	cheY-homologous receiver domain
AM474_RS28165	SM01012	AM474_RS28165
AM474_RS28220	SM00840	AM474_RS28220
AM474_RS28260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS28260	SM00387	Histidine kinase-like ATPases
AM474_RS28260	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS28265	SM00448	cheY-homologous receiver domain
AM474_RS28265	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS28285	SM00382	ATPases associated with a variety of cellular activities
AM474_RS28285	SM00994	ClpX C4-type zinc finger
AM474_RS28285	SM01086	C-terminal, D2-small domain, of ClpB protein
AM474_RS28290	SM00382	ATPases associated with a variety of cellular activities
AM474_RS28290	SM00464	Found in ATP-dependent protease La (LON)
AM474_RS28295	SM00411	bacterial (prokaryotic) histone like domain
AM474_RS28315	SM00382	ATPases associated with a variety of cellular activities
AM474_RS28340	SM00257	Lysin motif
AM474_RS28345	SM00849	Metallo-beta-lactamase superfamily
AM474_RS28360	SM00479	AM474_RS28360
AM474_RS28415	SM00822	AM474_RS28415
AM474_RS28435	SM00855	Phosphoglycerate mutase family
AM474_RS28445	SM00829	Enoylreductase
AM474_RS28505	SM01018	B12 binding domain
AM474_RS28540	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS28545	SM00267	diguanylate cyclase
AM474_RS28560	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS28600	SM00382	ATPases associated with a variety of cellular activities
AM474_RS28620	SM00990	AM474_RS28620
AM474_RS28625	SM00491	AM474_RS28625
AM474_RS28645	SM00823	Phosphopantetheine attachment site
AM474_RS28680	SM00382	ATPases associated with a variety of cellular activities
AM474_RS28695	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS28700	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM474_RS28720	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS28730	SM00486	DNA polymerase type-B family
AM474_RS28790	SM00421	helix_turn_helix, Lux Regulon
AM474_RS28855	SM00965	Secretin and TonB N terminus short domain
AM474_RS28965	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS28965	SM00091	PAS domain
AM474_RS28965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM474_RS28975	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM474_RS28980	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM474_RS29035	SM00382	ATPases associated with a variety of cellular activities
AM474_RS29045	SM00382	ATPases associated with a variety of cellular activities
AM474_RS29055	SM00354	helix_turn _helix lactose operon repressor
AM474_RS29130	SM00382	ATPases associated with a variety of cellular activities
AM474_RS29190	SM00897	FIST N domain
AM474_RS29190	SM01204	AM474_RS29190
AM474_RS29195	SM00091	PAS domain
AM474_RS29195	SM00387	Histidine kinase-like ATPases
AM474_RS29195	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS29195	SM00448	cheY-homologous receiver domain
AM474_RS29205	SM00421	helix_turn_helix, Lux Regulon
AM474_RS29205	SM00448	cheY-homologous receiver domain
AM474_RS29210	SM00387	Histidine kinase-like ATPases
AM474_RS29215	SM00421	helix_turn_helix, Lux Regulon
AM474_RS29215	SM00448	cheY-homologous receiver domain
AM474_RS29225	SM00564	beta-propeller repeat
AM474_RS29260	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM474_RS29275	SM00387	Histidine kinase-like ATPases
AM474_RS29275	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS29275	SM00448	cheY-homologous receiver domain
AM474_RS29310	SM00882	Coenzyme A transferase
AM474_RS29315	SM00882	Coenzyme A transferase
AM474_RS29340	SM00091	PAS domain
AM474_RS29340	SM00382	ATPases associated with a variety of cellular activities
AM474_RS29365	SM00346	helix_turn_helix isocitrate lyase regulation
AM474_RS29375	SM00878	Biotin carboxylase C-terminal domain
AM474_RS29395	SM00422	helix_turn_helix, mercury resistance
AM474_RS29430	SM00984	UDP binding domain
AM474_RS29460	SM00344	helix_turn_helix ASNC type
AM474_RS29480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS29510	SM01230	AM474_RS29510
AM474_RS29540	SM01234	AM474_RS29540
AM474_RS29550	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS29575	SM01116	AM474_RS29575
AM474_RS29580	SM00947	Carbonic anhydrase
AM474_RS29600	SM00965	Secretin and TonB N terminus short domain
AM474_RS29620	SM00382	ATPases associated with a variety of cellular activities
AM474_RS29680	SM00838	Elongation factor G C-terminus
AM474_RS29680	SM00889	Elongation factor G, domain IV
AM474_RS29685	SM00052	Putative diguanylate phosphodiesterase
AM474_RS29685	SM00091	PAS domain
AM474_RS29685	SM00267	diguanylate cyclase
AM474_RS29745	SM00344	helix_turn_helix ASNC type
AM474_RS29780	SM00965	Secretin and TonB N terminus short domain
AM474_RS29815	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS29830	SM00822	AM474_RS29830
AM474_RS29850	SM00797	Allophanate hydrolase subunit 2
AM474_RS29855	SM00796	Allophanate hydrolase subunit 1
AM474_RS29895	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS29945	SM00470	ParB-like nuclease domain
AM474_RS29985	SM00052	Putative diguanylate phosphodiesterase
AM474_RS30035	SM00822	AM474_RS30035
AM474_RS30065	SM01060	AM474_RS30065
AM474_RS30085	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
AM474_RS30090	SM00642	Alpha-amylase domain
AM474_RS30095	SM00642	Alpha-amylase domain
AM474_RS30100	SM00642	Alpha-amylase domain
AM474_RS30110	SM00155	Phospholipase D. Active site motifs.
AM474_RS30125	SM00829	Enoylreductase
AM474_RS30130	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS30140	SM00642	Alpha-amylase domain
AM474_RS30150	SM00642	Alpha-amylase domain
AM474_RS30160	SM00642	Alpha-amylase domain
AM474_RS30230	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM474_RS30230	SM00091	PAS domain
AM474_RS30230	SM00387	Histidine kinase-like ATPases
AM474_RS30230	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS30230	SM00448	cheY-homologous receiver domain
AM474_RS30250	SM01236	AM474_RS30250
AM474_RS30280	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM474_RS30310	SM00829	Enoylreductase
AM474_RS30325	SM00052	Putative diguanylate phosphodiesterase
AM474_RS30345	SM00062	Bacterial periplasmic substrate-binding proteins
AM474_RS30345	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM474_RS30400	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM474_RS30430	SM00091	PAS domain
AM474_RS30430	SM00382	ATPases associated with a variety of cellular activities
AM474_RS30620	SM00487	DEAD-like helicases superfamily
AM474_RS30620	SM00490	helicase superfamily c-terminal domain
AM474_RS30740	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS30840	SM00344	helix_turn_helix ASNC type
AM474_RS30850	SM00861	Transketolase, pyrimidine binding domain
AM474_RS30875	SM00870	AM474_RS30875
AM474_RS30910	SM00354	helix_turn _helix lactose operon repressor
AM474_RS30980	SM00422	helix_turn_helix, mercury resistance
AM474_RS30990	SM00829	Enoylreductase
AM474_RS30995	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS31000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM474_RS31010	SM00226	Low molecular weight phosphatase family
AM474_RS31020	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS31070	SM00564	beta-propeller repeat
AM474_RS31085	SM00567	E-Z type HEAT repeats
AM474_RS31105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM474_RS31105	SM00866	AM474_RS31105
AM474_RS31110	SM00060	Fibronectin type 3 domain
AM474_RS31110	SM00495	Chitin-binding domain type 3
AM474_RS31120	SM00823	Phosphopantetheine attachment site
AM474_RS31120	SM00824	Thioesterase
AM474_RS31150	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31170	SM00530	Helix-turn-helix XRE-family like proteins 
AM474_RS31205	SM00354	helix_turn _helix lactose operon repressor
AM474_RS31255	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31270	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS31275	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS31295	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31340	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31340	SM00930	AM474_RS31340
AM474_RS31360	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31385	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31445	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31475	SM00421	helix_turn_helix, Lux Regulon
AM474_RS31475	SM00448	cheY-homologous receiver domain
AM474_RS31485	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM474_RS31545	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31580	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31585	SM00965	Secretin and TonB N terminus short domain
AM474_RS31595	SM00823	Phosphopantetheine attachment site
AM474_RS31600	SM00823	Phosphopantetheine attachment site
AM474_RS31630	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31650	SM00923	MbtH-like protein
AM474_RS31705	SM01040	BRO family, N-terminal domain
AM474_RS31710	SM00823	Phosphopantetheine attachment site
AM474_RS31725	SM01006	Siderophore biosynthesis protein domain
AM474_RS31785	SM00244	prohibitin homologues
AM474_RS31790	SM00244	prohibitin homologues
AM474_RS31795	SM00244	prohibitin homologues
AM474_RS31850	SM00382	ATPases associated with a variety of cellular activities
AM474_RS31975	SM00965	Secretin and TonB N terminus short domain
AM474_RS32040	SM00448	cheY-homologous receiver domain
AM474_RS32040	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS32045	SM00387	Histidine kinase-like ATPases
AM474_RS32045	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS32090	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS32095	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS32105	SM00829	Enoylreductase
AM474_RS32140	SM00248	ankyrin repeats
AM474_RS32160	SM00364	Leucine-rich repeats, bacterial type
AM474_RS32160	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AM474_RS32195	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM474_RS32210	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS32255	SM00342	helix_turn_helix, arabinose operon control protein
AM474_RS32275	SM00448	cheY-homologous receiver domain
AM474_RS32275	SM00862	Transcriptional regulatory protein, C terminal
AM474_RS32280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM474_RS32280	SM00387	Histidine kinase-like ATPases
AM474_RS32280	SM00388	His Kinase A (phosphoacceptor) domain
AM474_RS32360	SM00563	Phosphate acyltransferases
AM474_RS32370	SM00195	Dual specificity phosphatase, catalytic domain
